BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022235
(300 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427242|ref|XP_002278544.1| PREDICTED: protein ABCI7, chloroplastic-like [Vitis vinifera]
Length = 495
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/305 (61%), Positives = 235/305 (77%), Gaps = 28/305 (9%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 290 TAVRQ 294
T+V+Q
Sbjct: 299 TSVQQ 303
>gi|18398463|ref|NP_564404.1| protein ABCI7 [Arabidopsis thaliana]
gi|75180162|sp|Q9LQK7.1|AB7I_ARATH RecName: Full=Protein ABCI7, chloroplastic; AltName: Full=ABC
transporter I family member 7; Short=ABC transporter
ABCI.7; Short=AtABCI7; AltName: Full=Non-intrinsic ABC
protein 6; AltName: Full=Plastid SufD-like protein;
Flags: Precursor
gi|8920626|gb|AAF81348.1|AC007767_28 Contains an uncharacterized protein family (UPF0051) domain
PF|01458 [Arabidopsis thaliana]
gi|115646721|gb|ABJ17094.1| At1g32500 [Arabidopsis thaliana]
gi|332193373|gb|AEE31494.1| protein ABCI7 [Arabidopsis thaliana]
Length = 475
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 212/285 (74%), Gaps = 11/285 (3%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPRV VLVEEGGE+GI+EEFVG
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K+ YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQ
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQ 291
>gi|297742116|emb|CBI33903.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 187/305 (61%), Positives = 235/305 (77%), Gaps = 28/305 (9%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 1 MAATLLSPHLLLN----PKLSIQNSASKFPTPKSRSTP-KIR---------AAFSDPFVL 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K+VS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKKVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 165 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 223
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 224 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 283
Query: 290 TAVRQ 294
T+V+Q
Sbjct: 284 TSVQQ 288
>gi|297851692|ref|XP_002893727.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
gi|297339569|gb|EFH69986.1| hypothetical protein ARALYDRAFT_473442 [Arabidopsis lyrata subsp.
lyrata]
Length = 476
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 213/285 (74%), Gaps = 10/285 (3%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + + QA+FSDPFV+QLAESLEDSL +S SS PL
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSIR-----AQASFSDPFVLQLAESLEDSLSASPSSSSLPL- 68
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
Q++RDSS++TLLSTPWPSRKDEPFRFTDTS I+ SQI+P++ R S LD T+ QFP
Sbjct: 69 -QRIRDSSAETLLSTPWPSRKDEPFRFTDTSFIRFSQIEPVSTHQRNSEILDNLTETQFP 127
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY GS G+ D + RVS+FI F GDLFWSINGMGA
Sbjct: 128 NAVIIDGFVSNLTIGPSDLPDGVYFGSFSGLPDELTNRVSEFIGNFDSGDLFWSINGMGA 187
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPR VLVEEGGE+GI+EEFVG
Sbjct: 188 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRGFVLVEEGGEIGIVEEFVG 247
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K+ YW N VLEVV+ K GK++HSYLQ +S+ +AH+KWT VRQ
Sbjct: 248 KDEEGFYWTNPVLEVVVQKNGKLKHSYLQKESMASAHVKWTFVRQ 292
>gi|21554655|gb|AAM63647.1| unknown [Arabidopsis thaliana]
Length = 475
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/285 (60%), Positives = 211/285 (74%), Gaps = 11/285 (3%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPRV VLVEEGGE+ I+EEFVG
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEISIVEEFVG 246
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K+ YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQ
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQ 291
>gi|147775510|emb|CAN69419.1| hypothetical protein VITISV_028794 [Vitis vinifera]
Length = 593
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/305 (61%), Positives = 234/305 (76%), Gaps = 28/305 (9%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR A FSDPFV+
Sbjct: 16 MAASLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------AAFSDPFVL 61
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 62 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 119
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I K VS
Sbjct: 120 TPISHPPTSIAISTDTQFPNLSIVDGHIVYSLSNLSQLPTGVFVGSLSSLPSETITKXVS 179
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G PD+ V+YVPAGC+VE P+++ Y SVEGG++ SKKLP+SNP
Sbjct: 180 EFVANFE-GDLFWSLNGLGTPDMAVVYVPAGCRVEMPLHIVYYSVEGGDIGSKKLPVSNP 238
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
RV VLVEEGGE+G+IEE+VG N CYWAN+V EVVIG+G KV+HSY+Q+QSL+AAHIKW
Sbjct: 239 RVFVLVEEGGEIGVIEEYVGVGENKCYWANTVTEVVIGEGAKVKHSYIQSQSLSAAHIKW 298
Query: 290 TAVRQ 294
T+V+Q
Sbjct: 299 TSVQQ 303
>gi|449461525|ref|XP_004148492.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
gi|449521999|ref|XP_004168016.1| PREDICTED: protein ABCI7, chloroplastic-like [Cucumis sativus]
Length = 496
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/308 (57%), Positives = 228/308 (74%), Gaps = 17/308 (5%)
Query: 1 MSALSFSPHLHINI-------NRNPKLTPKRRAKPNKI---RVSLQTTFPQATFSDPFVI 50
M+ +F+PH+ + + + T KR+ K N I RVSLQ + P + SDPFV+
Sbjct: 1 MATFTFTPHIGGRLPTPSLSVSSSYSSTSKRKPKFNSITTTRVSLQASTP--SLSDPFVL 58
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
QLAE+LEDSL SSSSS P PLQKLR+SS++ LLSTPWPSR+DEPFRFTD S IK SQI
Sbjct: 59 QLAETLEDSLSSSSSSS-SPFPLQKLRESSAENLLSTPWPSRRDEPFRFTDVSFIKQSQI 117
Query: 111 QPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMK 166
PI+ P ++S+ + QF ++V++DG NS NL+ LP+GVYVGS + + S+ + K
Sbjct: 118 HPISNPPQFSELSSIPLETQFANVVIVDGHFVNSVSNLTELPNGVYVGSFIDLPSESVGK 177
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
RVS+F+ GDLFWSING+GAPDL V+YVPAGCKVENPI+ +Y S+ GG+ SK+L +
Sbjct: 178 RVSEFVDGKFAGDLFWSINGVGAPDLTVVYVPAGCKVENPIHFRYYSINGGDEGSKELAV 237
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
SNPRV+VLVE GGE+ IIEEF+ +G YW+N VLEVVIG GGKV+HSY+QNQSLNAAH
Sbjct: 238 SNPRVLVLVENGGEIEIIEEFLSGDGGKSYWSNPVLEVVIGSGGKVKHSYIQNQSLNAAH 297
Query: 287 IKWTAVRQ 294
IKWT+V+Q
Sbjct: 298 IKWTSVQQ 305
>gi|255588981|ref|XP_002534787.1| Protein sufD, putative [Ricinus communis]
gi|223524572|gb|EEF27596.1| Protein sufD, putative [Ricinus communis]
Length = 484
Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 228/302 (75%), Gaps = 18/302 (5%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQ-TTFP--QATFSDPFVIQLAESLE 57
MSAL F P ++ +L PK + +K++ SL TT P QA FSDPFV+QLAE+LE
Sbjct: 1 MSALVFVPPVYTFTRITTRLKPKPK---HKVKTSLSLTTTPVIQAGFSDPFVLQLAETLE 57
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP- 116
DSL S S LQKLRDS S++LLSTPWPSR+DEPFRFTDTS+IK SQI PI++P
Sbjct: 58 DSLSPSPS-------LQKLRDSCSESLLSTPWPSRRDEPFRFTDTSLIKQSQIHPISKPP 110
Query: 117 --SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFIS 173
D+S DAQ P++V++DGFI NS N N PDGV+VGS+L D I K VS +
Sbjct: 111 PIDHLTDISKDAQLPNIVIVDGFILNSMSNSLNFPDGVFVGSMLNDPEDKIAKLVSKYFD 170
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+FQ GDLFWSING+GAPD+ VIYVPAG +VENPI+L+Y+SVEGG S KLP+SNPRV+V
Sbjct: 171 DFQWGDLFWSINGLGAPDVAVIYVPAGVRVENPIHLRYVSVEGGEEGSNKLPVSNPRVLV 230
Query: 234 LVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+VEEGGEVGIIEEFV G+ CYWANSVLEV+I +G KV+HSY+Q+QSLN+AHIKWTAV
Sbjct: 231 VVEEGGEVGIIEEFVSIGSGDKCYWANSVLEVMIEEGAKVKHSYIQSQSLNSAHIKWTAV 290
Query: 293 RQ 294
+Q
Sbjct: 291 QQ 292
>gi|224138876|ref|XP_002326712.1| predicted protein [Populus trichocarpa]
gi|222834034|gb|EEE72511.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/279 (66%), Positives = 216/279 (77%), Gaps = 16/279 (5%)
Query: 23 KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQ 82
K++ KP +S T QA+FSDPFV+QLAE+LEDSL S S LQ+LRDSSS+
Sbjct: 3 KQKQKPKSFSLST-TPITQASFSDPFVLQLAETLEDSLSPSVS-------LQRLRDSSSE 54
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQFPSLVLIDGFI 138
+LLST WPSRKDEPFRFTDTS I+ SQI PIT+P LD ++ D PS+V+ DGF+
Sbjct: 55 SLLSTSWPSRKDEPFRFTDTSFIRLSQIVPITKPPQ-LDYLPSINEDTLLPSIVIADGFV 113
Query: 139 QNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
NS LS LPDGVYVGSLL SD I +RV +F+ +F+ GDLFWSING+GA D+ V+YV
Sbjct: 114 LNSMSKLSTLPDGVYVGSLLSDSSDRIAERVLEFVGDFEWGDLFWSINGLGAHDMTVVYV 173
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
PAG KVENPI+ KY+SVEGG SKKLP+SNPRV V+VEEGGEVGIIEEFV KEGND
Sbjct: 174 PAGVKVENPIHFKYVSVEGGEKGSKKLPVSNPRVFVVVEEGGEVGIIEEFVSKEGNDDRY 233
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQ
Sbjct: 234 YWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQ 272
>gi|359475767|ref|XP_003631753.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Vitis vinifera]
Length = 527
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/311 (60%), Positives = 232/311 (74%), Gaps = 34/311 (10%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR ATFSDPFV
Sbjct: 1 MAATLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------ATFSDPFVP 46
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q+AESLEDSL SSS+S P PL QKLRD+SSQT+LSTPWPSRKDEPFRFTDTS+I+ SQ+
Sbjct: 47 QIAESLEDSLSSSSTSSPPPL--QKLRDASSQTVLSTPWPSRKDEPFRFTDTSLIRYSQV 104
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVS 169
PI+ P +S+ +STD QFP+L ++DG I S NLS LP GV+VGSL + S+ I KRVS
Sbjct: 105 TPISHPPTSIAISTDTQFPNLCIVDGHIIYSLSNLSQLPTGVFVGSLSSLPSETITKRVS 164
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+F++ F+ GDLFWS+NG+G D+ V+YVPAGC+VE P+++ Y SVEGG++ KKLP+SNP
Sbjct: 165 EFVANFE-GDLFWSLNGLGTLDMVVVYVPAGCRVEMPLHIVYXSVEGGDIGFKKLPVSNP 223
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV------VIGKGGKVRHSYLQNQSLN 283
RV VLVEEGGE+G IEEFVG N CYWAN+V EV VIG+G KV+HSY+Q+QSL+
Sbjct: 224 RVFVLVEEGGEIGEIEEFVGGGENKCYWANAVTEVRIIIILVIGEGAKVKHSYIQSQSLS 283
Query: 284 AAHIKWTAVRQ 294
AAHIKWT+V+Q
Sbjct: 284 AAHIKWTSVQQ 294
>gi|357482367|ref|XP_003611469.1| Protein ABCI7 [Medicago truncatula]
gi|355512804|gb|AES94427.1| Protein ABCI7 [Medicago truncatula]
Length = 474
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/267 (53%), Positives = 187/267 (70%), Gaps = 13/267 (4%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP G +VE P+
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+L Y+S++G +L +SNPRV+V+VE+GGEV I+EEF G E N+CYW+N+VLEVVIG
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNE-NECYWSNAVLEVVIG 258
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+GGKVRHSY+Q QS+ AAHIKWT+VRQ
Sbjct: 259 EGGKVRHSYVQTQSMLAAHIKWTSVRQ 285
>gi|388493956|gb|AFK35044.1| unknown [Medicago truncatula]
Length = 450
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/267 (53%), Positives = 187/267 (70%), Gaps = 13/267 (4%)
Query: 31 IRVSLQTTFPQATF--SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTP 88
IR + TF A SDPF++ LAE+LEDS+P+ P PLQ LR +SS +LLS+P
Sbjct: 29 IRTKTRVTFNNAISISSDPFILDLAETLEDSVPT-------PQPLQNLRQASSHSLLSSP 81
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV-LIDGFIQNSALNLSN 147
WPSRK EPFRF D S ++SSQI + P + + QFP + ++DG S +S
Sbjct: 82 WPSRKHEPFRFNDFSFLRSSQI--LPAPIPTTTTTATDQFPCHISIVDGHFIQSTSKISE 139
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
DGVYVG+L ++ + KRV + +S GDLFWSINGMGAPDL V+YVP G +VE P+
Sbjct: 140 FSDGVYVGNLSKLNGVVAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVRVETPV 199
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+L Y+S++G +L +SNPRV+V+VE+GGEV I+EEF G E N+CYW+N+VLEVVIG
Sbjct: 200 HLGYVSLQGSKEGGNELYLSNPRVLVVVEKGGEVDIVEEFEGNE-NECYWSNAVLEVVIG 258
Query: 268 KGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+GGKV+HSY+Q QS+ AAHIKWT+VRQ
Sbjct: 259 EGGKVKHSYVQTQSMLAAHIKWTSVRQ 285
>gi|356541420|ref|XP_003539175.1| PREDICTED: protein ABCI7, chloroplastic-like [Glycine max]
Length = 452
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/298 (47%), Positives = 188/298 (63%), Gaps = 39/298 (13%)
Query: 1 MSALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSL 60
M+ + FSP +P + P P K+RV Q +A SDP+V++LAE+LEDS
Sbjct: 1 MNGIGFSP-----AGYSP-VIPSSSCFPKKLRVQPQ----RALSSDPYVLELAETLEDSF 50
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
PSS S+ PLPLQ LR SSSQ+LLSTPWPSR+DEPFRFTD S I+ S+I P++ P+ SL
Sbjct: 51 PSSPST---PLPLQNLRLSSSQSLLSTPWPSRRDEPFRFTDLSFIRQSRILPVS-PTISL 106
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
T S+LP+ VYVGSL S +++RVS FI F GDL
Sbjct: 107 LTPT---------------------SHLPNDVYVGSLSSSSPSLLQRVSHFICPFPIGDL 145
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD--SKKLPISNPRVVVLVEEG 238
F+SING+ APDL ++YVP GC V+ PI+L Y+ + D + +SNPRV+V+VE+G
Sbjct: 146 FFSINGIAAPDLTLVYVPEGCHVDIPIHLDYMLPPTPSTDDSDAAMHLSNPRVLVVVEKG 205
Query: 239 GEVGIIEEFVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V IIE+F + ND YW+N+ E VIG+G K+ HSY+Q QS AAHIKWT++RQ
Sbjct: 206 AHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQSFRAAHIKWTSIRQ 263
>gi|116790030|gb|ABK25476.1| unknown [Picea sitchensis]
Length = 474
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 162/260 (62%), Gaps = 20/260 (7%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
DPFV++LAE LE+S +SS++L L +LR++ ++ + PWPS KDE FRFTD
Sbjct: 36 ALGDPFVLELAEKLEES--ASSNNLKNK-SLHRLRETCTEEVFRRPWPSAKDESFRFTDI 92
Query: 103 SMIKSSQIQPITRPSSSLDVS-TDAQFP---SLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
+K S+IQ +S LD+ + P +++LIDG + S + + LP GV+VGSL
Sbjct: 93 KFLKQSKIQVSEPLNSPLDLQGLENGRPGAYTILLIDGLLSTSHSHTAGLPHGVFVGSLS 152
Query: 159 GVSDGIMKRVSDFI----SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ D D++ GDLF S+NG+G+ DLGV+ VP GCK+E P+++ Y S
Sbjct: 153 SLPD-------DYVLPPLEAADGGDLFSSLNGIGSRDLGVVIVPEGCKLERPLHVVYYSQ 205
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
+GG+ D + L +SNPR+VV++ +G E+ I+EEF G N YW NSVL V + + ++ H
Sbjct: 206 QGGD-DLQSLCVSNPRLVVVLGKGAEMEIVEEFRGA-ANKSYWTNSVLHVSLEEKAQLCH 263
Query: 275 SYLQNQSLNAAHIKWTAVRQ 294
S++Q Q+ A H+KWT V+Q
Sbjct: 264 SFVQLQNPCAVHMKWTFVQQ 283
>gi|121489809|emb|CAK18875.1| hypothetical protein [Phillyrea latifolia]
Length = 191
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 128/179 (71%), Gaps = 12/179 (6%)
Query: 18 PKLTP--KRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQK 75
PKLTP K R + K RV Q+ A SDP V+QLAE+LEDSL SSSS+ P P PLQK
Sbjct: 18 PKLTPGSKTRLRTGKARVFTQSPT-LAILSDPRVLQLAETLEDSLQSSSSA-PLP-PLQK 74
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS---TDAQFP-SL 131
LRD SSQ+LLSTPWPSRKDEPFRFTDTS IK+S I+PI+ PS S ++ +D P ++
Sbjct: 75 LRDISSQSLLSTPWPSRKDEPFRFTDTSFIKNSDIEPIS-PSKSQSLAPVLSDTLLPLNI 133
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
++DG++ +S LS LPDGV+VG L + S+ MKRVS+ + FQ GDLFW +NG+GA
Sbjct: 134 TILDGYVVDSLSQLSELPDGVFVGGLSSITSEATMKRVSECVPNFQ-GDLFWLLNGVGA 191
>gi|326523615|dbj|BAJ92978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 153/264 (57%), Gaps = 32/264 (12%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 55 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 107
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 108 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 156
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 157 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 215
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 216 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 274
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V HSY+Q QS AAH KWT V+Q
Sbjct: 275 RVVHSYVQRQSSAAAHTKWTTVQQ 298
>gi|326488209|dbj|BAJ89943.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 508
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 153/264 (57%), Gaps = 32/264 (12%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 73 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 125
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 126 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 174
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 175 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 233
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 234 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 292
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V HSY+Q QS AAH KWT V+Q
Sbjct: 293 RVVHSYVQRQSSAAAHTKWTTVQQ 316
>gi|326520878|dbj|BAJ92802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 153/264 (57%), Gaps = 32/264 (12%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 212 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 270
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V HSY+Q QS AAH KWT V+Q
Sbjct: 271 RVVHSYVQRQSSAAAHTKWTTVQQ 294
>gi|326496228|dbj|BAJ94576.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528307|dbj|BAJ93335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 153/264 (57%), Gaps = 32/264 (12%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTD 101
+ SD V+++AE LEDS PSS PL L LR +S+ +LL+TPWP+R+ +E FRFTD
Sbjct: 51 SVSDDLVLRIAEQLEDSAPSS------PL-LAPLRSASALSLLTTPWPTRRSNEAFRFTD 103
Query: 102 TSMIKSSQIQPITRPSSSLDVST---DAQFPSLVLI-DGFIQNSALNLSNLPDGVYVGSL 157
S ++S PI+ P+ + ++ + S VL DG + +A G +V +L
Sbjct: 104 ISYLRS---LPISTPARTPGLAPPPPSSDLESHVLFSDGRLVAAA--------GAHVSAL 152
Query: 158 LGVSDG----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYL 212
+ G + F D+F+ N +GA D+ V++VP G K+ +P+++ +
Sbjct: 153 ADMPPGHARDRAAAAIAASARFSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF- 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGG 270
G+ + L +SNPRV+V+ E+G EV I+EE VG+E CYWAN V+++++ +G
Sbjct: 212 -AYSGSDGASSLMMSNPRVLVIAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGA 270
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V HSY+Q QS AAH KWT V+Q
Sbjct: 271 RVVHSYVQRQSSAAAHTKWTTVQQ 294
>gi|302766733|ref|XP_002966787.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
gi|300166207|gb|EFJ32814.1| hypothetical protein SELMODRAFT_64071 [Selaginella moellendorffii]
Length = 469
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 145/265 (54%), Gaps = 16/265 (6%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D F+++LAE LEDS+ + + L L+ LRD S++ ++ WPS KDE +RFT+
Sbjct: 21 DFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTCKWPSSKDEAYRFTNVKF 80
Query: 105 IKSSQIQPITR-----PSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSL 157
+K S+IQP+ S S + D + S LV +DG + + +P VYVGS+
Sbjct: 81 LKDSEIQPLILGEDEVESLSFEGMEDEEDESIRLVFVDGILSPELSKVEGVPPEVYVGSI 140
Query: 158 LGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
LG D + K V I++ D F S+NG+GA DLGV+ VP K+E PI++ Y S
Sbjct: 141 LGAPDEKLQKYVVPRIAQASTLIDKDAFVSLNGIGALDLGVVLVPKDLKLEKPIHVVYYS 200
Query: 214 VEGGNVDSKKLP----ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
N+ ++ P ++NPR++V+ EG V ++EEF G +W NSV E+VI G
Sbjct: 201 TPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEESSHWTNSVCEIVIESG 260
Query: 270 GKVRHSYLQNQSLNAAHIKWTAVRQ 294
V H +Q Q ++ +K T V Q
Sbjct: 261 ASVSHDLIQTQERSSVSMKKTYVSQ 285
>gi|302761748|ref|XP_002964296.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
gi|300168025|gb|EFJ34629.1| hypothetical protein SELMODRAFT_64073 [Selaginella moellendorffii]
Length = 469
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 144/265 (54%), Gaps = 16/265 (6%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
D F+++LAE LEDS+ + + L L+ LRD S++ ++ WPS KDE +RFT+
Sbjct: 21 DFFLLELAEKLEDSVSKGAGEERRSNLVLKALRDGSAEVAVTCKWPSSKDEAYRFTNVKF 80
Query: 105 IKSSQIQPI-----TRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSL 157
+K S+IQP+ S S + D + S LV +DG + + +P VYVGS+
Sbjct: 81 LKDSEIQPLIIGGDEVESLSFEGMEDEEGESIRLVFVDGILSPELSKVEGVPPEVYVGSI 140
Query: 158 LGVSD-GIMKRVSDFISEFQC---GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
L D + K V IS+ D F S+NG+GA DLGV+ VP K+E PI++ Y S
Sbjct: 141 LAAPDEKLQKYVVPRISQASTLIDKDAFVSLNGIGALDLGVVLVPKDLKLEKPIHVVYYS 200
Query: 214 VEGGNVDSKKLP----ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
N+ ++ P ++NPR++V+ EG V ++EEF G +W NSV E+VI G
Sbjct: 201 TPRKNLKNQLEPQVVSMTNPRLLVVASEGATVHLVEEFRGGTEESSHWTNSVCEIVIESG 260
Query: 270 GKVRHSYLQNQSLNAAHIKWTAVRQ 294
V H +Q Q ++ +K T V Q
Sbjct: 261 ASVSHDLIQTQGRSSVSMKKTYVSQ 285
>gi|413947304|gb|AFW79953.1| hypothetical protein ZEAMMB73_288078 [Zea mays]
Length = 481
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 161/286 (56%), Gaps = 33/286 (11%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R P + S+ T P SD V+++AE LEDS+ S+S PL L LR
Sbjct: 22 PLLRFRRSYAP--VAASVPRTAP--AVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 71
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLI- 134
+S+ +LLST WP+R+ E FRFTD S ++S PI+ PS D+ + F S VL
Sbjct: 72 SASALSLLSTRWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLKLPSSPFSSHVLFS 128
Query: 135 DGFIQNSALNLSNLPDGVYVGSLL----GVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
DG + +S+ G +V +L G + +EF DLF+ N +GA
Sbjct: 129 DGILVSSS--------GAHVSALADLPPGRARDRAAAALAAAAEFAHKDLFYDFNAVGAR 180
Query: 191 DLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++VP G KV ++PI++ + N ++ + +SNPRV+V+ E+ EV I+EE G
Sbjct: 181 DVVVVHVPEGVKVADDPIHIMFAYT---NSFAESMLMSNPRVLVVAEKSAEVAIVEEHFG 237
Query: 250 K-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E CYWAN V E++I +G +V HSY+Q+QS AAH KWT V+Q
Sbjct: 238 AGEEGGCYWANPVAEIIIDEGARVVHSYVQHQSFAAAHTKWTVVQQ 283
>gi|242056569|ref|XP_002457430.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
gi|241929405|gb|EES02550.1| hypothetical protein SORBIDRAFT_03g007140 [Sorghum bicolor]
Length = 479
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 158/286 (55%), Gaps = 33/286 (11%)
Query: 18 PKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLR 77
P L +R + P VS SD V+++AE LEDS+ S+S PL L LR
Sbjct: 21 PLLRFRRSSAP----VSASVARAAPAVSDDLVLRIAEQLEDSVTSTS-----PL-LDPLR 70
Query: 78 DSSSQTLLSTPWPSRKD-EPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLI- 134
+S+ +LLSTPWP+R+ E FRFTD S ++S PI+ PS D++ + F S VL
Sbjct: 71 SASALSLLSTPWPTRRSSEAFRFTDISYLRS---LPISLPSREPDLALPSSPFSSHVLFS 127
Query: 135 DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMGAP 190
DG + +S+ G +V +L + G + + DLF+ N +GA
Sbjct: 128 DGILLSSS--------GAHVSTLADLPPGRARDRAAAALAASAEFAHKDLFYDFNAVGAR 179
Query: 191 DLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++VP G K+ ++PI++ + G + + +SNPRV+V+ E+ EV I+EE G
Sbjct: 180 DVVVVHVPEGVKMADDPIHILFAYTNSG---AGSMLMSNPRVLVVAEKAAEVAIVEEHFG 236
Query: 250 K-EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E CYWAN V E++I +G +V HSY+Q QS AAH KWT V+Q
Sbjct: 237 AGEEGGCYWANPVAEIIIDEGARVVHSYVQQQSFAAAHTKWTVVKQ 282
>gi|168064389|ref|XP_001784145.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
gi|162664345|gb|EDQ51069.1| ATP-binding cassette transporter, subfamily I, member 10, ABC
component protein PpABCI10 [Physcomitrella patens subsp.
patens]
Length = 450
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 145/270 (53%), Gaps = 23/270 (8%)
Query: 46 DPFVIQLAESLEDSLPSSSS--SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS 103
D F++ LAE LE+S+PS SL L +LR S++ L+ WP+ KDE +RFTD
Sbjct: 1 DFFLLDLAEKLENSVPSEEQGDSLG-ARALAELRYKSAEQALNLRWPTNKDEAYRFTDVR 59
Query: 104 MIKSSQI-----QPITRPS--SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGS 156
+K+ I QP + P+ S L + F LV +DG I S + L G YVGS
Sbjct: 60 FLKNLDIAPTPAQPASVPNFESELGLGETEAF-RLVFVDGVISESLSKVEGLSGGAYVGS 118
Query: 157 LLGVS----DGIMKRVSDFISEFQCG---DLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
+ ++ + + +++ + G DLF +NG+G D G+++ P G ++ PI++
Sbjct: 119 VCKITADSAGSALSQALEYLGKPAAGTQDDLFTFLNGLGVQDAGLVFAPKGVQLSKPIHV 178
Query: 210 KYLSV-EGGNVDSKK---LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
Y S GG+ D ++ + ++ PR++V+ E G V IIE+FVG + YW N V E+
Sbjct: 179 VYYSTGRGGSKDGEEVTSISLATPRLLVVAESGARVEIIEQFVGAP-DQVYWTNQVCEIY 237
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+ G +V HS Q Q +A HIK T V Q+
Sbjct: 238 VANGAEVSHSCSQEQERSAVHIKQTHVSQV 267
>gi|115434288|ref|NP_001041902.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|53791281|dbj|BAD52546.1| putative SufD [Oryza sativa Japonica Group]
gi|113531433|dbj|BAF03816.1| Os01g0127300 [Oryza sativa Japonica Group]
gi|215697126|dbj|BAG91120.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 147/256 (57%), Gaps = 23/256 (8%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGN 218
++ + F DLF+ N +GA D+ V++VP G + ++P+++ + G+
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q
Sbjct: 217 ---GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQ 273
Query: 279 NQSLNAAHIKWTAVRQ 294
QS AAH KWT V+Q
Sbjct: 274 QQSFAAAHTKWTVVQQ 289
>gi|125568868|gb|EAZ10383.1| hypothetical protein OsJ_00219 [Oryza sativa Japonica Group]
Length = 482
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 147/256 (57%), Gaps = 23/256 (8%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTS 103
SD V+++AE LEDS+ +SS PL L LR +S+ +LLST WP+R+ +E +RFTD S
Sbjct: 51 SDDLVLRIAEQLEDSVAASS-----PL-LDPLRSASALSLLSTRWPTRRSNEAYRFTDIS 104
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
++S I +R + ++ + DG + +S+ G +V +L + G
Sbjct: 105 YLRSLPISLPSRDAPAVAPPASPYASHVHFSDGVLTSSS--------GAHVSALADLPPG 156
Query: 164 IMK----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGN 218
++ + F DLF+ N +GA D+ V++VP G + ++P+++ + G+
Sbjct: 157 HVRDRAAAALAASAGFADKDLFFDFNAVGAKDVVVVHVPEGVSMADDPVHIMFSYSGCGD 216
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q
Sbjct: 217 ---GSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQ 273
Query: 279 NQSLNAAHIKWTAVRQ 294
QS AAH KWT V+Q
Sbjct: 274 QQSFAAAHTKWTVVQQ 289
>gi|357127219|ref|XP_003565281.1| PREDICTED: protein ABCI7, chloroplastic-like [Brachypodium
distachyon]
Length = 572
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 144/264 (54%), Gaps = 36/264 (13%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK-DEPFRFTDTSM 104
D V+++AE LEDS SS PL L LR +S+ +LLSTPWP+R+ +E FRFTD S
Sbjct: 138 DDLVLRIAEQLEDSASSS------PL-LDPLRSASALSLLSTPWPTRRSNEAFRFTDISY 190
Query: 105 IKSSQIQPITRPSSSLDVST------DAQFPSLVLIDGFI----QNSALNLSNLPDGVYV 154
++S PI+ PS + + D + DG + A L++LP G
Sbjct: 191 LRS---LPISLPSQTPSSAPAPPPSSDLGSSHIRFSDGLLVSATGAHAAALADLPPGQAR 247
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLS 213
+ DLF+ N +G+ D+ V+YVP G K+ ++P+++ + +
Sbjct: 248 DRAAAALAASAEFAHR--------DLFYDFNAVGSSDVAVVYVPEGAKMTDDPVHISF-A 298
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG---KEGNDCYWANSVLEVVIGKGG 270
G D + +SNPRV+V+ E+G EV I+EE G ++ CYWAN V+++V+ +G
Sbjct: 299 YSGS--DGASMMMSNPRVLVIAEKGAEVAIVEEHFGIGEEDDGACYWANPVVDIVVEEGA 356
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V HSY+Q QS AAH KWT V+Q
Sbjct: 357 RVVHSYVQRQSSAAAHTKWTTVQQ 380
>gi|356495543|ref|XP_003516636.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 382
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
F GDLFWSING+ APDL ++Y+P GC V+ PI+L Y+ D+ +L SNPR +V+
Sbjct: 74 FPNGDLFWSINGIAAPDLTLVYIPEGCHVDIPIHLDYMHPPNTTTDAMQL--SNPRFLVV 131
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSV--LEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
VE+G + IIEEF + + E VIG+G K+ HSY+Q QS +AHIKWT+
Sbjct: 132 VEKGAQANIIEEFSALKIMKMTLIGVMPAFEAVIGEGAKLTHSYIQTQSFRSAHIKWTSC 191
Query: 293 RQ 294
Q
Sbjct: 192 MQ 193
>gi|326509811|dbj|BAJ87121.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVE-NPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
F D+F+ N +GA D+ V++VP G K+ +P+++ + G+ + L +SNPRV+V
Sbjct: 201 FSHRDIFYDFNAVGASDVAVVHVPEGAKMAGDPVHIMF--AYSGSDGASSLMMSNPRVLV 258
Query: 234 LVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
+ E+G EV I+EE VG+E CYWAN V+++++ +G +V HSY+Q QS AAH KWT
Sbjct: 259 IAEKGAEVAIVEEHFGVGEEDGGCYWANPVVDIIVEEGARVVHSYVQRQSSAAAHTKWTT 318
Query: 292 VRQ 294
V+Q
Sbjct: 319 VQQ 321
>gi|119509160|ref|ZP_01628311.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
gi|119466326|gb|EAW47212.1| hypothetical protein N9414_05145 [Nodularia spumigena CCY9414]
Length = 457
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 123/231 (53%), Gaps = 15/231 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DAQF 128
Q+LR ++ + + P+ ++E +RFTD S ++ Q T+ S +D+S +A
Sbjct: 45 FQELRQGAANWVRHSSIPTTREEEWRFTDLSALRQVQFHVETQLKS-VDISALTLPEAVN 103
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV ++G +++LP GV VG+L G S + V ++++ + ++F ++N
Sbjct: 104 SRLVFVNGVYAPDLSAVADLPSGVVVGNLAGFSKSQQEIVKHYLAQAEGSQEVFTALNTA 163
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
G D V++V VE PI+L +++V G ++ IS PR +V+ E GG V ++E+F
Sbjct: 164 GISDAAVVWVAQNVIVETPIHLLFVAVVG-----EQATISQPRCLVMAETGGSVTVVEDF 218
Query: 248 VGKEGND----CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ G + Y N+V EV +G+ +V H+ ++ + A H+ TAV Q
Sbjct: 219 INHRGAEDAEGVYLTNAVTEVWLGENAQVSHTRIEREGAEAFHVGKTAVTQ 269
>gi|434397830|ref|YP_007131834.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
gi|428268927|gb|AFZ34868.1| Iron-regulated ABC transporter permease protein SufD [Stanieria
cyanosphaera PCC 7437]
Length = 444
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
SDPF++++ + S+P L+ LR+ S+ + +PS+KDE +RFTD S
Sbjct: 15 SDPFLLKILQQ-RSSVPKEKLDSETSTWLENLREQSASWVSRLKFPSKKDEEWRFTDLSS 73
Query: 105 IKS---SQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ + + T S ++D+ +A +V ++G N S LP G+YVG+L +
Sbjct: 74 LLDLDFTAAKSGTVESDTIDLIPEATESRIVFVNGLYAPELSNTSGLPKGIYVGNLTNLP 133
Query: 162 DGIMKRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ K ++ Q G ++F S+N D+ +I+ VE PI+L ++SV ++
Sbjct: 134 EAYCKYFRPYLGT-QAGAEEVFTSLNTASITDVAIIWAAPNTVVEQPIHLLFISVTEDSI 192
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S PR ++ E+ + IIEE+ G+ Y N+V E+ +G+ ++ H+ Q
Sbjct: 193 S-----FSQPRSWIVAEKNCSLNIIEEYTGQ---SSYLTNAVTEIWLGENAQINHTRFQT 244
Query: 280 QSLNAAHIKWTAVRQ 294
+S A HI TAV Q
Sbjct: 245 ESETAYHIGKTAVSQ 259
>gi|443311377|ref|ZP_21041006.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
gi|442778574|gb|ELR88838.1| FeS assembly protein SufD [Synechocystis sp. PCC 7509]
Length = 444
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 125/230 (54%), Gaps = 14/230 (6%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST----DA 126
L LQ+LRD +S + P+ +DE +RFTD S ++ T P +D+S+ +A
Sbjct: 37 LLLQELRDRTSSIINLATLPTTRDEEWRFTDLSALRQLNFSENTSPQ--IDISSLILPEA 94
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
+ LV ++G + +++LPDG+ V +L G+ ++ ++++ Q ++F ++N
Sbjct: 95 ENSRLVFVNGVYTSELSRVADLPDGITVSNLAGLPITHRSKIKKYLAQQQGATEVFTALN 154
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
G D+ +++V V+ PI+L ++S S++ +S PR +++ E G V ++E
Sbjct: 155 TSGISDVAIVWVGKNVVVDTPIHLLFVST------SEQPIVSQPRCLLVAESGSNVTVVE 208
Query: 246 EFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ D Y+ NSV E+ + + +V H+ ++ +SL A HI TAV Q
Sbjct: 209 EYKKAGSADTVYFTNSVTEIWLEENAEVSHTRIEQESLEAFHIGKTAVSQ 258
>gi|356507151|ref|XP_003522334.1| PREDICTED: LOW QUALITY PROTEIN: protein ABCI7, chloroplastic-like
[Glycine max]
Length = 401
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 11/138 (7%)
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL-----SVEGGN 218
+++ S FI F GD F SI+G+ APDL + YV G V+ I L + + EG
Sbjct: 79 FIRQFSQFICTFPIGDFFCSISGIAAPDLTLAYVLEGFHVDILIQLDNMHPPTPTTEG-- 136
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE--GNDCYWANSVLEVVIGKGGKVRHSY 276
S + + NPRV+++VE+G IIE+F+ + ND Y N+ E +IG+G K+ HSY
Sbjct: 137 --SDAMQLFNPRVLIIVEKGEHFNIIEDFLASQENQNDSYXRNATFEAMIGQGAKLTHSY 194
Query: 277 LQNQSLNAAHIKWTAVRQ 294
+Q S +AAHIKWT++RQ
Sbjct: 195 IQTXSFHAAHIKWTSIRQ 212
>gi|428318184|ref|YP_007116066.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
gi|428241864|gb|AFZ07650.1| Iron-regulated ABC transporter permease protein SufD [Oscillatoria
nigro-viridis PCC 7112]
Length = 444
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 23/236 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS----------SLDV 122
L LRD ++Q +LS+ +P+ KDE +RFTD S + QI P+ P S ++ V
Sbjct: 35 LDDLRDIAAQYVLSSHFPTVKDEEWRFTDLSPLL--QI-PLHLPESNQPEIKLSDITMPV 91
Query: 123 STDAQFP-SLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCG 178
A P LV ++GF S +NL NLP Y G+L V + R+SD +S+ Q
Sbjct: 92 KDRADLPLRLVFVNGFYAPHLSTVNLPNLPLDFYAGNLSNVPEKYQGRISDVLSKHRQQT 151
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++F ++N G D V++VPA ++ PI+L +L+ G + +S P V+ E G
Sbjct: 152 EVFTALNTAGLTDSAVVFVPANMSIDLPIHLLFLTAPGASP-----TMSQPHCSVIAEPG 206
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V ++E++ GN + N+V +V++G+ V H LQ ++ HI +A+ Q
Sbjct: 207 SNVTLVEDY-ATIGNVAAFTNAVTDVLVGENATVNHVRLQREAGEVVHIGKSAIEQ 261
>gi|427731168|ref|YP_007077405.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
gi|427367087|gb|AFY49808.1| FeS assembly protein SufD [Nostoc sp. PCC 7524]
Length = 457
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI-TRPSSSLDVST----DAQ 127
LQ+LRD ++ + + P+ ++E +RFTD S + + + T P++SLD++ ++
Sbjct: 45 LQELRDRAANWVRHSTIPTTREEEWRFTDLSALCQVEFNHVETLPATSLDITGLTLPESH 104
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+ LV ++G +++LP G+ VG+L + +RV +++ + ++F ++N
Sbjct: 105 YSRLVFVNGVYSPELSAVADLPAGIVVGNLTTLPLTEQERVQQHLAQAEGALEVFTALNT 164
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D+ V+ V VE PI+L +++V G + IS PR +V+ E G +V +IE+
Sbjct: 165 AGISDVAVVLVAKNLVVETPIHLLFITVAG-----ETATISQPRCLVVAESGSQVSVIED 219
Query: 247 FVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+V + Y N+V E+ I V H ++ S A HI TAV Q
Sbjct: 220 YVTIPQREETVYLTNTVTEIAIADNAHVTHIRVERDSQAAFHIGKTAVTQ 269
>gi|75906651|ref|YP_320947.1| FeS assembly protein SufD [Anabaena variabilis ATCC 29413]
gi|75700376|gb|ABA20052.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
variabilis ATCC 29413]
Length = 454
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 18/231 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
LQ+LR+ ++ + + P+ ++E +RFTD S ++ + ++ DV +
Sbjct: 45 LQELRERATNWVRHSVIPNTREEEWRFTDLSALRRVEFHH----AAHTDVEKLHEMSLRG 100
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSI 184
LV ++G N++NLP G+ VG+L + +RV ++++ + ++F ++
Sbjct: 101 TGDNGLVFVNGVYTPELSNIANLPTGIVVGNLSALPITEQERVQKYLAQSEGALEVFTAL 160
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G D+ V+ V VE PI+L ++SV + IS PR +V+ E G +V ++
Sbjct: 161 NTAGISDVAVVLVAKNVIVETPIHLLFVSVA-----DETATISQPRCLVVAESGSQVSVV 215
Query: 245 EEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EEFV ++ Y N+V E+ I +V H+ ++N+S A HI TAV Q
Sbjct: 216 EEFVTPNADEGVYLTNAVTEITIADNAQVVHTRIENESKQAFHIGKTAVTQ 266
>gi|443326002|ref|ZP_21054671.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
gi|442794383|gb|ELS03801.1| FeS assembly protein SufD [Xenococcus sp. PCC 7305]
Length = 435
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
LQ +R+ S+ + P+ KDE +RFTD +S++ + P + + +A+ L
Sbjct: 39 LQTIREQSASWVSKLTLPTTKDEEWRFTDISSLLDREFVAPKSFTTDKNITIPEAEDTRL 98
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
V ++G N+S LP G+YVGSL + + + F+ + +F S+N
Sbjct: 99 VFVNGSYAAELSNISGLPQGIYVGSLTNLPENFCQYFRPFLGTLPGKEEVFTSLNTASIA 158
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
D+ +I+ VE PI+L ++SV G + + IS PR ++ E+ ++ I+EE+ G
Sbjct: 159 DVAIIWAAPNTVVEKPIHLVFVSVAG-----ESITISQPRGWIVAEKNCQLTIVEEYSGA 213
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
Y N+V E+ +G+ ++ H+ LQ +S+ A HI TAV Q
Sbjct: 214 ---SSYITNAVTEIWLGENAQINHTRLQQESVTAYHIGKTAVNQ 254
>gi|17229986|ref|NP_486534.1| hypothetical protein alr2494 [Nostoc sp. PCC 7120]
gi|17131586|dbj|BAB74193.1| alr2494 [Nostoc sp. PCC 7120]
Length = 453
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 11/227 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPS--SSLDVSTDAQFP 129
LQ+LR S++ + + P+ ++E +RFTD S ++ + Q +P+ S+L +S +A
Sbjct: 45 LQELRGSAANWVRHSTIPTTREEEWRFTDLSALRRVEFQQGEVKPADISALSLS-EAANN 103
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV ++G +++LP G+ V +L + +RV ++++ + ++F ++N G
Sbjct: 104 RLVFVNGVYAPDLSAVADLPPGIVVDNLSALPITEQERVQKYLAQSEGALEVFTALNTAG 163
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D+ V+ V VE PI+L +++V G + IS PR +V+ E G +V +IEEFV
Sbjct: 164 ISDVAVVLVAKNVIVETPIHLVFIAVAG-----ETATISQPRCLVVAESGSQVSVIEEFV 218
Query: 249 GKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ Y N+V E+ I +V H+ ++N+S A HI TAV Q
Sbjct: 219 TPNVDEGVYLTNAVTEITIADNAQVVHTRVENESKQAFHIGKTAVTQ 265
>gi|186684918|ref|YP_001868114.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
gi|186467370|gb|ACC83171.1| FeS assembly protein SufD [Nostoc punctiforme PCC 73102]
Length = 457
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 123/231 (53%), Gaps = 14/231 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ--IQPITRPSSSLDVSTDAQFPS 130
LQ+LR S++ + + P+ ++E +RFTD S ++ Q I+ + S D+ +A
Sbjct: 44 LQELRQSAANWVRHSIIPTTREEEWRFTDLSSLRKVQFNIETVNYASLEFDILPEAANSR 103
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G +S+LP G+ V +L G+S + V F+++ + ++F ++N G
Sbjct: 104 LVFVNGVFAPELSAVSDLPSGIVVSNLAGLSVLEQEGVRQFLAQAEGAQEVFTALNTAGI 163
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D V++V VE PI+L ++SV G + IS PR +V+ E G EV ++EE+
Sbjct: 164 TDAAVVWVKKNVVVETPIHLVFISVVG-----ETATISQPRCLVVAESGSEVTLVEEYTN 218
Query: 250 KEGND------CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ G + Y+ N+V EV +G +V H+ ++ + A HI TA+ Q
Sbjct: 219 RRGAESAEKEGVYFTNAVTEVWVGDNAQVSHTRVEQEGAEAFHIGKTAIAQ 269
>gi|427719480|ref|YP_007067474.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
7507]
gi|427351916|gb|AFY34640.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 7507]
Length = 459
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++R ++ + + P+ ++E +RFTD S ++ Q T +S+ D+ +A
Sbjct: 45 LQEVRQHATNWVRHSTIPTTREEEWRFTDLSSLRKVQFNVETGKFTSVQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G +++LP G+ VG+L ++ I KRVS ++++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAIADLPPGIVVGNLTELTVDIQKRVSQYLAQAEGAQEVFTALNTAGL 164
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE--- 246
D V+ V VE I+L +++V G + IS PR +V+ E G V ++EE
Sbjct: 165 TDAAVVLVDKNVAVETLIHLVFMTVAG-----ETATISQPRCLVVAESGSSVTLVEEYRN 219
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
F E Y N+V E+ + + +V H+ + +S A HI TAV Q
Sbjct: 220 FSSTEKEGVYLTNAVTEIWLAENAQVSHTRVVRESAEAFHIGKTAVTQ 267
>gi|427740191|ref|YP_007059735.1| iron-regulated ABC transporter permease SufD [Rivularia sp. PCC
7116]
gi|427375232|gb|AFY59188.1| Iron-regulated ABC transporter permease protein SufD [Rivularia sp.
PCC 7116]
Length = 450
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 18/232 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPS 130
LQ+L+DS++ + + P++KDE +RFTD S + R S D + T
Sbjct: 44 LQELKDSAASRVRHSFLPTKKDEEWRFTDLSALFKIDFNVENRNFLSPDTTPFTAISENR 103
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMG 188
LV ++G ++ ++NLPDGV V +L + D + V +++ + Q GD +F ++N G
Sbjct: 104 LVFVNGIFKSELSAIANLPDGVVVSNLASLPDLDGEFVKEYLGQAQ-GDKEVFTALNTAG 162
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
DL +I++ VE PI+L +++ + IS PR +V+ + G EV ++EEF+
Sbjct: 163 INDLALIWLSRNVVVETPIHLVFIT-------AGDKTISQPRCLVVAKTGSEVTLVEEFI 215
Query: 249 ------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K+ + Y N+V E+ + + V HS ++ L A HI TAV Q
Sbjct: 216 HFGDVEKKQEKEVYLNNAVTEIWVDENAGVNHSRVERDGLEAFHIGKTAVTQ 267
>gi|443476916|ref|ZP_21066797.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
gi|443018046|gb|ELS32366.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
biceps PCC 7429]
Length = 467
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 80 SSQTLLSTPWPSRKDEPFRFTDTSMIKS-SQIQPITRPSSSLDVST--------DAQFPS 130
+S L + +P+ KDE +++TD S + S + P TR S + D+ ++
Sbjct: 61 ASDRLFNLSFPTTKDEEWKYTDVSALGSLTFANPETRTSRNSDIEALITKHIAPESLGSR 120
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGA 189
LV ++G + +LSN+ G+ +G+L + D I+ ++ +++ + D F S+N
Sbjct: 121 LVFVNGRYRQDLSDLSNIVGGLEIGTLETLGDRILPKLRSHLAQHPEANDYFASLNTACM 180
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSV-EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D+ +I VP VENPI L + SV E G + I+ PR +V+ E + ++ FV
Sbjct: 181 EDVAIILVPKNLVVENPIQLIFGSVPEVG----QATLINQPRCLVIAESHSNLTFVQTFV 236
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G E + Y+ N+V EV + +G +V H+ +Q Q A HI TA+ Q
Sbjct: 237 G-EDHQVYFTNAVTEVWLAEGAQVNHTKVQQQGNEAIHINTTAIAQ 281
>gi|428207029|ref|YP_007091382.1| iron-regulated ABC transporter permease SufD [Chroococcidiopsis
thermalis PCC 7203]
gi|428008950|gb|AFY87513.1| Iron-regulated ABC transporter permease protein SufD
[Chroococcidiopsis thermalis PCC 7203]
Length = 467
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 126/241 (52%), Gaps = 25/241 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLD--VSTDAQ 127
L+++RD +S + + P+ K E +RFTD S +K Q P P++ + ++A
Sbjct: 43 LREIRDRASSIIRQSTLPTTKIEEWRFTDLSALKQFNFQVAAPTGLPAALVTPLTFSEAA 102
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
L+ I+G + +LP GV V +L G+ RV +++++ + G D+F ++N
Sbjct: 103 NSRLIFINGVYTPEHSAIGDLPKGVVVSNLSGLPAEYRDRVYNYLAKSEAGQDIFTALNT 162
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIE 245
D+ V+++P VE PI+L +++ +S + P I+ PR +V+ E G V ++E
Sbjct: 163 AAITDVAVVWIPKNVVVEAPIHLLFIA------NSFRTPTINQPRCLVVAETGSSVTLVE 216
Query: 246 EFV------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+++ + G Y+ N+V E+ +G+ +V H+ ++ +S+ A HI TA+
Sbjct: 217 DYLNQFNIEDPEEGEAEVGETVYFTNAVTEIWLGENAQVSHTRVERESVEAFHIGKTAIT 276
Query: 294 Q 294
Q
Sbjct: 277 Q 277
>gi|428304611|ref|YP_007141436.1| iron-regulated ABC transporter permease SufD [Crinalium epipsammum
PCC 9333]
gi|428246146|gb|AFZ11926.1| Iron-regulated ABC transporter permease protein SufD [Crinalium
epipsammum PCC 9333]
Length = 437
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 26/246 (10%)
Query: 67 LPQPLP-----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
L Q LP ++++RD ++ + P+ +DE +R TD S + Q ++ S++
Sbjct: 20 LGQELPATTSLIREIRDRATAVVQELAIPTTRDEEWRVTDLSGLLKVNFQAVSNQESAIS 79
Query: 122 VST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
+S +A LV ++G +++NLP G++VG+LL + + + +++ +
Sbjct: 80 LSDINSLILPEAAASRLVFVNGIYAPELSSVANLPAGLFVGNLLAAN---IPHLENYLGK 136
Query: 175 FQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
Q G ++F ++N D V+YVP VE PI+L ++SV G + IS PR +V
Sbjct: 137 QQGGQEVFTALNTASLTDAAVVYVPKNLLVETPIHLLFISVTG-----EAATISQPRCLV 191
Query: 234 LVEEGGEVGIIEEFVGK-----EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
+VE G V +IE+++ + NSV EV +G+ +V H +Q ++ A HI
Sbjct: 192 VVEAGSTVTLIEDYISYPVTSPQSPVTNLTNSVTEVWVGENAQVSHIRVQQENKEAFHIG 251
Query: 289 WTAVRQ 294
+A+ Q
Sbjct: 252 KSAIAQ 257
>gi|428215690|ref|YP_007088834.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
gi|428004071|gb|AFY84914.1| FeS assembly protein SufD [Oscillatoria acuminata PCC 6304]
Length = 457
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 132/272 (48%), Gaps = 24/272 (8%)
Query: 40 PQATFSDPFVIQLAESLEDSL-PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFR 98
PQ ++ D + Q S + P+ + P LQ++RD+++ + P+RKDE +R
Sbjct: 9 PQVSYLDELLKQAVASPAPVVNPAYGMAPPTAALLQQVRDNAATWVRELAMPTRKDEEWR 68
Query: 99 FTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDG 151
TD S +++ Q P ++ + A F LV ++G N+S LP+G
Sbjct: 69 VTDLSGLQALTFQ--AAPPEAIPTTGVAPFELPEMLDSRLVFVNGCYSAELSNVSGLPEG 126
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLK 210
++VG+L + + ++ ++ ++F S+N G D V+++ V+ PI+L
Sbjct: 127 IFVGNLGQLPPSLQTQLPKYLGNVDGNKEVFTSLNTAGLMDAAVVWIAKDVAVDKPIHLL 186
Query: 211 YLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVL 262
+++V G + PR +++ E G IEE+V + + C Y+ N+V
Sbjct: 187 FMAVPGAQPR-----LVQPRCLIVAERGSRCTAIEEYVVADDDSCGNFKGNAPYFTNAVT 241
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ + + +V H+ +Q +S N+ HI TA+ Q
Sbjct: 242 EIWVAETAQVTHAKIQRESTNSFHIGKTAIAQ 273
>gi|255071939|ref|XP_002499644.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226514906|gb|ACO60902.1| ATP-binding cassette superfamily, partial [Micromonas sp. RCC299]
Length = 406
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVST--DAQ 127
++ LR + ++L P+ + E +RFTD + + +S+ P S T DA
Sbjct: 6 VEALRSRAIESLKRARVPNSRVEDYRFTDLAPLLTSKPVAADPAAASSVDAAAWTLADAD 65
Query: 128 FPSLVLIDGFIQNSALNLS--NLPDGVYVGSL-LGVSDGIMKRVSDFISEFQCGDLFWSI 184
+VL+DG A N++ N DGV V ++ LG S G +S + +F I
Sbjct: 66 ATRVVLVDGAFNADASNVTGANDVDGVVVSTVSLGASSGFAI---GEVSAVRGAGVFAEI 122
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N A D VI VPAG + PI++ LS D + + S PRV V V EG V I+
Sbjct: 123 NAATASDAVVINVPAGKSLSAPIHIVQLSTSAATKDGE-MSSSAPRVAVHVGEGASVSIV 181
Query: 245 EEFVGKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EEF G++ YW N V E+V+ KG KV H+ +Q Q+ A H + T + Q
Sbjct: 182 EEFAAAGGSEDGAYWHNGVCELVLEKGAKVTHTMVQAQTRAAVHTRATHLTQ 233
>gi|218441630|ref|YP_002379959.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
gi|218174358|gb|ACK73091.1| FeS assembly protein SufD [Cyanothece sp. PCC 7424]
Length = 454
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 125/237 (52%), Gaps = 25/237 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLD--VSTDAQ 127
+Q+LR + T+ + P++KDE +RFTD S ++ Q P+ +S+D + +
Sbjct: 33 IQQLRHQAGMTVSQSSLPTKKDEEWRFTDISQLQQHHFQVATPVELTLNSIDSFILPETD 92
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++GF N+S LP GV +G+L +S ++++ ++ + Q G + F + N
Sbjct: 93 NSILVFVNGFYSPELSNISGLPQGVKIGNLATLSP---EKIAPYLGQ-QPGQTEFFTAFN 148
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGII 244
+G D+ VI+V A VE P+ L +L+VE + PI PRV+V+ E+ + ++
Sbjct: 149 TVGLTDVAVIWVDAEITVERPVELLFLTVE------PQTPIVIQPRVLVVAEKNSSLQLV 202
Query: 245 EEF-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E + G G Y+ NSV E+ + + ++ H+ +Q +S + HI TA+ Q
Sbjct: 203 EYYNVLTENCSGSSGKSSYFTNSVTEIWLQENAQINHTRIQQESGKSFHIGKTAIAQ 259
>gi|254413288|ref|ZP_05027059.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
gi|196179908|gb|EDX74901.1| FeS assembly protein SufD [Coleofasciculus chthonoplastes PCC 7420]
Length = 452
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 25/238 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT----RPSSSLDVSTDAQFPS 130
+LRD ++ + P+R+DE +RFTD S + + Q + + LD+ T P
Sbjct: 38 QLRDQAAAIVEELAMPTRRDEEWRFTDLSPLLAVNFQGVEAFFEQFLQHLDL-TSLTLPE 96
Query: 131 -----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSI 184
LV ++G ++ LP+GVYVG+L G+ + +R+ +++ + Q D+F ++
Sbjct: 97 TPDSRLVFVNGVYAPDLSSVRGLPEGVYVGNLAGLPNAYQERIPNYLGKQQAASDVFAAL 156
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGI 243
N G D V+++P VE PI+L ++S + +P I PR +V+ E G V +
Sbjct: 157 NTSGLTDAAVVWIPKATIVETPIHLLFIST------TDDVPVICQPRCLVVAEPGSVVNL 210
Query: 244 IEEFVGK-EG------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IE + EG N Y+ N V E+ I +V H+ Q ++++ HI TAV Q
Sbjct: 211 IEHYAANVEGCPDIPVNRPYFNNQVTEIWIEDDAQVIHTRNQREAIDGFHIGKTAVTQ 268
>gi|298490172|ref|YP_003720349.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
gi|298232090|gb|ADI63226.1| FeS assembly protein SufD ['Nostoc azollae' 0708]
Length = 448
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 130/235 (55%), Gaps = 21/235 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVSTDA 126
LQ+LRDS+ + + + P+ ++E +RFTD S++K + + + ++LDV +
Sbjct: 37 LQQLRDSAVKWVRHSVIPNTRNEEWRFTDLSLLKEVEFNSVDIKTLEKFQETALDVEIFS 96
Query: 127 QFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSI 184
+ LV ++G + ++NLP G+ +G+L + D + + +++++ + D+F ++
Sbjct: 97 EVSHCLVFVNGIFAPNLSAITNLPPGLKIGNLDILPDAVAQ---EYLAQSEGTRDVFTTL 153
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G D+ V++V V+NPIYL ++SV G + IS PR +V+ E +V +I
Sbjct: 154 NTAGLNDVAVVWVGKNVVVQNPIYLLFISVAG-----ESAIISQPRCLVVAESNSQVSLI 208
Query: 245 EEFVGKEG-----NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EE+ + G ++ Y+ANSV E+ + + +V H+ + Q A HI TAV Q
Sbjct: 209 EEYTNRRGAEKAEDEVYFANSVTEIWVNENAQVSHTRVVMQGEAAFHIGKTAVTQ 263
>gi|428225672|ref|YP_007109769.1| iron-regulated ABC transporter permease SufD [Geitlerinema sp. PCC
7407]
gi|427985573|gb|AFY66717.1| Iron-regulated ABC transporter permease protein SufD [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV-----STDAQ 127
LQ LRD + L +PSR+DE +RFTD S + + Q T + + ++A+
Sbjct: 42 LQGLRDQGAAFLKEQSFPSRRDEDWRFTDLSPLLAVPFQAATASRLTPEAIAPFAVSEAE 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LVL++G ++ LP G +VGSL + + D++++ G+ F ++N
Sbjct: 102 QSRLVLVNGVYAPELSAIAGLPAGAFVGSLADLPAERQSALQDYLAKQHGGEERFTALNT 161
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
D+ V+++P +E PI+L ++ + + + +PR +V+ E G + ++E+
Sbjct: 162 SHFQDVAVVWLPHNAVIEAPIHLLLVAT------ASEAALISPRCLVVAETGSALTLVED 215
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
FV G+ +W N+V EV + +V H+ +Q +++ A HI TAV Q
Sbjct: 216 FV-TVGDGPHWTNAVTEVWVQANAQVNHTRIQREAIAAFHIGKTAVSQ 262
>gi|332709645|ref|ZP_08429604.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
gi|332351472|gb|EGJ31053.1| Iron-regulated ABC transporter permease protein SufD [Moorea
producens 3L]
Length = 449
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 17/233 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIKSSQIQPITRPSSSLDVST----DAQ 127
LQ+L + + P+ KDE +RFTD S +++ + + +S+LD+S +A
Sbjct: 32 LQELSNHARGIAQELAIPTTKDEEWRFTDLSPLLQETFEAALAVDTSTLDISPVVLPEAM 91
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
LV ++G +++ LP+GV+VG+L + R++D++ Q D+F +N
Sbjct: 92 NSRLVFVNGIYAPEQSSVAGLPEGVFVGNLAELPSEYQSRIADYLGNQQGVSDVFTLLNT 151
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIE 245
G D+ VI++P +V PI+L ++S+ G +P + PR +V+ E G ++ ++E
Sbjct: 152 AGLTDVAVIWLPRNTEVTAPIHLLFVSMADG------VPRLFQPRCLVVAEPGSQLSLVE 205
Query: 246 EF-VGKEGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ G+E N Y NSV E+ +G+ +V H + +S A H+ +A+ Q
Sbjct: 206 EYWQGQEANSAQGVYLTNSVTELWVGENARVTHIRVDGESNQAFHVGKSAIAQ 258
>gi|428776745|ref|YP_007168532.1| iron-regulated ABC transporter permease SufD [Halothece sp. PCC
7418]
gi|428691024|gb|AFZ44318.1| Iron-regulated ABC transporter permease protein SufD [Halothece sp.
PCC 7418]
Length = 450
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQK + ++ + + +P RKDE +RFTD S + + SQ + S+S +A
Sbjct: 41 LQKRQQEAANWVAESRFPHRKDEEWRFTDLSPLLDHPFQGSQAVAVNPESASQFFIPEAS 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSING 186
LV ++G L LP GV + SL + +V+D++++ + G+ LF ++N
Sbjct: 101 SARLVFVNGRFSPELSQLDQLPSGVTLTSLGNLDVHQQSQVTDYLTQQEGGEELFTALNT 160
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D G+++V A +VE PI + +L+V GN S+ + PR++V+ + +V +IE+
Sbjct: 161 AGFEDSGIVWVAANTEVETPIQVLFLAV--GNDTSQFM---QPRLLVVADTSAKVNLIEQ 215
Query: 247 F--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + E Y N V E+ + +V H LQ+++ N+ HI TAV Q
Sbjct: 216 YASLSSENAAPYLCNPVSEIWLAGNAEVNHIRLQDEAFNSFHIAKTAVTQ 265
>gi|218245299|ref|YP_002370670.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|257058334|ref|YP_003136222.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
gi|218165777|gb|ACK64514.1| FeS assembly protein SufD [Cyanothece sp. PCC 8801]
gi|256588500|gb|ACU99386.1| FeS assembly protein SufD [Cyanothece sp. PCC 8802]
Length = 455
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 25/224 (11%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQFPSLVLIDGFIQ 139
P+P+ E +RFTD S + + P RP S+ +S +A+ SL+ ++G
Sbjct: 56 PFPTTHHEEWRFTDLSELYQIRFDP--RPRSTTILSDTLAPFILPEAKLSSLIFVNGEFA 113
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVP 198
NL+ LPDGVYVG+L+G+S ++V +++++ D+F +N + +++V
Sbjct: 114 PELSNLAALPDGVYVGNLMGLSSEKREKVVNYLAKHDGAKDVFTLMNTADMYHIAIVWVD 173
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--- 255
V+ PI+L +L+V S I PRV+V+ E G + ++E + G DC
Sbjct: 174 PNVTVDIPIFLLFLTVA-----SHIHNIIQPRVLVIAETGSSLQLVEHY-GAISEDCSDL 227
Query: 256 -----YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
Y+ N+V E+ + +V H+ +Q + ++ HI TA+ Q
Sbjct: 228 AHNKAYFTNTVTEIWVKDNAQVNHTRVQRELGDSFHIGKTAIAQ 271
>gi|428779546|ref|YP_007171332.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
gi|428693825|gb|AFZ49975.1| FeS assembly protein SufD [Dactylococcopsis salina PCC 8305]
Length = 447
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 22/253 (8%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L++ LE + S+ + LQK + ++ + + +P RK+E +RFTD S + Q Q
Sbjct: 22 LSQRLESQIAEDDSTFK--VWLQKRQQEAANWVAESKFPHRKEEEWRFTDLSPLLDYQFQ 79
Query: 112 PITRPSS------SLDVST--DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+S S++ T + LV ++G + LP GV + SL +
Sbjct: 80 ---RPASIAPNQESIEPFTLPECSQTRLVFVNGRYAPQLSQVDQLPAGVTMTSLAELDVH 136
Query: 164 IMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+V+D++++ + G+ LF ++N G D +++V +VE P++L +LSV +
Sbjct: 137 QQSQVTDYLTQQEGGEELFTALNTAGFEDTAIVWVAVNTEVETPLHLLFLSV------GE 190
Query: 223 KLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ P PR++V+ E +V IE++VG Y+ N V EV + +V H LQ ++
Sbjct: 191 ETPQFIQPRLLVVAETSAKVSFIEQYVGL-TTAPYFCNPVTEVWLAPNAEVNHVRLQEEA 249
Query: 282 LNAAHIKWTAVRQ 294
LN+ HI TAV Q
Sbjct: 250 LNSFHIGKTAVMQ 262
>gi|411119135|ref|ZP_11391515.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
gi|410710998|gb|EKQ68505.1| Iron-regulated ABC transporter permease protein SufD
[Oscillatoriales cyanobacterium JSC-12]
Length = 450
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 16/232 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
LQ++RD ++ + PS ++E +RFTD S + +++ + R SS++ + A F
Sbjct: 42 LQEVRDRAASRVQELAIPSTREEEWRFTDLSPLLKVELKSVARKSSAISQAEIASFILPE 101
Query: 129 --PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFIS-EFQCGDLFW 182
LV +DG NLP + VG+L + + R+ D+++ + G+ F
Sbjct: 102 SSTCLVFVDGTFLPELSTTQNLPTNMVVGNLATAIQQESSLQNRILDYLARQPGSGETFT 161
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N D+ VIYVP V++PI++ ++S D ++ ++ PR +V+ E +
Sbjct: 162 ALNTASMTDVAVIYVPQKQIVDSPIHVLFVS----TADQPQV-MTTPRCLVIAESNSSLT 216
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IE+++ + Y+ NSV EV + V H+ +Q S A HI TAV Q
Sbjct: 217 LIEDYISLNAS-VYFTNSVTEVWVEANAHVNHTRIQRDSQTAFHIGKTAVSQ 267
>gi|414078259|ref|YP_006997577.1| FeS assembly protein SufD [Anabaena sp. 90]
gi|413971675|gb|AFW95764.1| FeS assembly protein SufD [Anabaena sp. 90]
Length = 438
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 121/226 (53%), Gaps = 13/226 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
L++LRD +++ + + P+ ++E +RFTD S +K + +SL D+ +
Sbjct: 37 LKQLRDGAAKWVRHSVIPNTREEEWRFTDLSSLKQVDFKLGMFQKTSLGSDILPEVS-QR 95
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGA 189
LV ++G N NLP G+ VG+L +S I V +++++ + ++F ++N
Sbjct: 96 LVFVNGVYSPDLSNTENLPAGLIVGNLNVLSSEI---VGEYLAQAEGAKEVFTALNTAAL 152
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ V++V +E PI+L ++SV G + IS PRV+V+ E +V +IEE++
Sbjct: 153 NDVAVVWVGKNVVLETPIHLLFISVSG-----ESATISQPRVLVVAESNSQVTLIEEYIA 207
Query: 250 KEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
N+ Y+ NSV E+ + + +V H+ + + A H+ TAV Q
Sbjct: 208 SSQNEGVYFTNSVTEIWVNENAQVSHNRIAREGAAAFHVGKTAVTQ 253
>gi|159490004|ref|XP_001702979.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158270886|gb|EDO96717.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 482
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 16/234 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDVSTD 125
P L LR+ S L + P+ ++E +RFTD + + + +QP PS L
Sbjct: 62 PSSLAALREQSKSALATLRMPTTRNEDYRFTDIAPLLRTNVQPAAAGAAVPSELLAAH-- 119
Query: 126 AQFPS----LVLIDGFIQ-NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
+ P LV++DG ++ + LS LP G YVG L G + + +++ + G
Sbjct: 120 -ELPGAAARLVVVDGVLRPELSSGLSGLPAGTYVGPLAGAPEAVKQKLGSLSNSR--GGP 176
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +NG P++ V+ VPA ++E P+++ +L+ G + ++ + PR+++ G
Sbjct: 177 FAVLNGSLVPEVLVVAVPAERQLEGPLFVLHLA--SGATGADEVAANAPRLLLHAGTGSS 234
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++EE+V G Y +V E+ + VRHSY+Q + + H K T V Q
Sbjct: 235 AELVEEYVALPGGRRYLTVAVGELFLEAAASVRHSYVQREGEGSFHFKSTLVHQ 288
>gi|428301500|ref|YP_007139806.1| iron-regulated ABC transporter permease SufD [Calothrix sp. PCC
6303]
gi|428238044|gb|AFZ03834.1| Iron-regulated ABC transporter permease protein SufD [Calothrix sp.
PCC 6303]
Length = 451
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 10/225 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--TDAQFPS 130
L ++++ ++ + + P+ +DE +RFTD S +K + +S +++ + +
Sbjct: 52 LPEVKEKAANWVRHSTLPTTRDEEWRFTDLSALKQVNFNVASGSITSSNIAFLQECENSR 111
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +S LP+G+ V +L + ++ + ++ + ++F ++N G
Sbjct: 112 LVFVNGVYAAELSAVSGLPEGITVTNLSQLPAEYTEKAKIYFAQAEGAIEVFTALNTAGM 171
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D VI++ VE PI+L Y++ V IS PR +V+ E G +V ++EEFV
Sbjct: 172 LDAAVIWIGKNVAVETPIHLIYVTTGENPV------ISQPRCLVVAETGSQVTLVEEFV- 224
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E D ++ N+V E+ +G+ V HS +Q +L HI TAV Q
Sbjct: 225 TENQDGHFVNAVTEIWVGENASVNHSRIQKDNLATFHIGKTAVTQ 269
>gi|428218175|ref|YP_007102640.1| iron-regulated ABC transporter permease SufD [Pseudanabaena sp. PCC
7367]
gi|427989957|gb|AFY70212.1| Iron-regulated ABC transporter permease protein SufD [Pseudanabaena
sp. PCC 7367]
Length = 484
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 33/248 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSL----------- 120
LQ +R + L+ P +K E +++TD ++++K S + + +P L
Sbjct: 56 LQSIRQEAQTLLVDQELPHKKQEEWKYTDLSAVLKRSYV--LRKPQECLLDALENPGFEK 113
Query: 121 ----DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-----DGIMKRVSDF 171
+ +A LV ++G L +LP+GV VGSL + + + +R+++F
Sbjct: 114 LIAGQIVPEAARSLLVFVNGVFSPQLSGLIDLPEGVIVGSLAQLCADCLPEKVQQRLAEF 173
Query: 172 ISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL----SVEGGNVDSKKLPI 226
++E D F ++N D+ + YVP ++ PI Y S + N+ I
Sbjct: 174 LAELTDADDFFANLNAACLSDVAIAYVPKNVVIDQPIQFVYAVTPRSAQTANISV----I 229
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
S PR +V+ E G + ++E +VG E + Y +NSV E+++G+ V H+ +Q + A H
Sbjct: 230 SQPRCLVVAETGSSMTLVETYVG-EPDRSYLSNSVAEIMVGENAAVNHTKVQWEGHAACH 288
Query: 287 IKWTAVRQ 294
I TA+ Q
Sbjct: 289 ISTTAIAQ 296
>gi|428312510|ref|YP_007123487.1| iron-regulated ABC transporter permease SufD [Microcoleus sp. PCC
7113]
gi|428254122|gb|AFZ20081.1| Iron-regulated ABC transporter permease protein SufD [Microcoleus
sp. PCC 7113]
Length = 462
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 126/233 (54%), Gaps = 17/233 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPS- 130
L++LRD +++ + + P+++DE +RFTD S + Q P ++ + V+TD P
Sbjct: 52 LKQLRDRAARWVKTLSLPAKRDEDWRFTDLSPLLQVNFQTPESQAEITESVATDFALPEA 111
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G +++LP+G+ V +L + +V +++++ Q G ++F ++N
Sbjct: 112 SIRLVFVNGVYAPHLSAVTDLPEGLVVSNLAQLPVAYRSKVGNYLAQ-QPGSAEVFTALN 170
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V++V +VE PI+L ++S SK +S PR +V+ E G + ++E
Sbjct: 171 TASLKDAAVVWVGKNQQVETPIHLLFISTV-----SKTPTVSLPRCLVVAESGSNLTLVE 225
Query: 246 EFVG-KEGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ K GND Y+ N+V E+V+ + ++ H+ + +S A HI +A+ Q
Sbjct: 226 EYRNYKCGNDVQKVYFTNAVTEIVLEENAQINHTRIDQESKGAFHIGKSAIAQ 278
>gi|334120519|ref|ZP_08494599.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
gi|333456497|gb|EGK85129.1| FeS assembly protein SufD [Microcoleus vaginatus FGP-2]
Length = 454
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 39/249 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS----------LDV 122
LQ LR++++Q +LS+ +P+ +DE +RFTD S + QI P P S+ + V
Sbjct: 35 LQDLREAATQYVLSSSFPTVRDEEWRFTDLSSVL--QI-PFHIPQSNQSKVKLADIIMPV 91
Query: 123 STDAQFP-SLVLIDGFIQNSALNLSNLPDGV---------------YVGSLLGVSDGIMK 166
P LV ++GF A +LS + V Y G+L V +
Sbjct: 92 KNRDDLPLRLVFVNGFY---APDLSTVESSVFPNLPLAEPSKRIDFYAGNLSNVPEKYQG 148
Query: 167 RVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
R+SD +S+ Q ++F ++N G D V++VPA ++ PI+L +L+ G +
Sbjct: 149 RISDVLSKHRQQTEVFTALNTAGLADSAVVFVPANMSIDLPIHLLFLTAPGASP-----T 203
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+S P +V+ E G V ++E++ GN + N+V +VV+G+ V H LQ +
Sbjct: 204 MSQPHCLVIAEPGSNVTLVEDY-ATIGNVAAFTNAVTDVVVGENATVNHVRLQREGGEVV 262
Query: 286 HIKWTAVRQ 294
HI +A+ Q
Sbjct: 263 HIGTSAIEQ 271
>gi|172035921|ref|YP_001802422.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|354556032|ref|ZP_08975330.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
gi|171697375|gb|ACB50356.1| putative iron-sulfur assembly protein [Cyanothece sp. ATCC 51142]
gi|353552031|gb|EHC21429.1| FeS assembly protein SufD [Cyanothece sp. ATCC 51472]
Length = 449
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 20/236 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 MQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLEFQTAKTETVTQSIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S LP+ +YVG+L + D +++D++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSELPEDIYVGNLSDLPDPKNNKIADYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
G D+ VI+V VE PI L +L+V GN + + PR +V+ E G + +E
Sbjct: 153 TAGFKDVAVIWVNKNIVVETPIQLLFLTV--GN---ETPSLIQPRTLVIAETGSSLSFVE 207
Query: 246 EFV-------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ E N Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q
Sbjct: 208 YYATVTESCSDDEKNQPYFTNSVTEIWLDNNAQINHSRIQRELGDSFHIGKSAISQ 263
>gi|119493189|ref|ZP_01624064.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
gi|119452754|gb|EAW33931.1| hypothetical protein L8106_15719 [Lyngbya sp. PCC 8106]
Length = 446
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 42/260 (16%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------------MI 105
+L + + +PQ LQ LRD ++ L P++K+E +RFTD S +
Sbjct: 19 NLAKTQTIVPQNSHLQDLRDRAATELQDKAIPTQKEEDWRFTDLSGLLQVNFQVAKPMQL 78
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL--PDGVYVGSLLGVSDG 163
I P+T P +A+ LV +DG A +LS DG++ G+L +
Sbjct: 79 TPEDISPLTLP--------EAENSCLVFVDG---EYAPHLSTFSQTDGIFAGNLGNLPAS 127
Query: 164 IMKRVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
R+ D++ + Q ++F ++N D+ +I+V VE P++L ++S D+
Sbjct: 128 FGDRIDDYLDKQQGNSEIFTALNTASLTDIAIIWVGKNQAVETPLHLLFISTAD---DTP 184
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEVVIGKGGKVRH 274
++ S PR +V+ E G IE + E DC Y+ NSV E+ I + +V+H
Sbjct: 185 RM--SQPRALVVAETGSSCTFIEHYASLE--DCSGFSTHHPYFVNSVTEIWIEENAEVKH 240
Query: 275 SYLQNQSLNAAHIKWTAVRQ 294
+ +Q + A HI TA+ Q
Sbjct: 241 TRVQRDAPQAFHIGRTAISQ 260
>gi|145349023|ref|XP_001418940.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
gi|144579170|gb|ABO97233.1| ABC(membrane) family transporter (Fe-S assembly/SufBCD system)
[Ostreococcus lucimarinus CCE9901]
Length = 383
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 18/210 (8%)
Query: 90 PSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVST---DAQFPSLVLIDGFIQNSALNL 145
P+ + E +RFTD S + ++ + P + +S D S + ++VL+DG + + +
Sbjct: 1 PTNRAEEYRFTDFSALTTATLVGP--KEGASADASATRVEDACATVVLVDGVLDATQSDF 58
Query: 146 SNLPD-GVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
G+ + +G +D + S G++F +IN A D+ V+ VP G K
Sbjct: 59 EGAAKAGIKIS--VGAADATTGKQSATR-----GNVFAAINSASAADVVVVRVPKGVKCA 111
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
+P+++ +S G N ++ +S PR+ ++VEE GE+ ++E+F G EG YW N V E+
Sbjct: 112 SPVHIVTMSTGGENGATR---VSAPRITIVVEEEGELCVVEDFAG-EGETEYWQNGVCEI 167
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ KG ++H+ +QN A H + T V Q
Sbjct: 168 AVEKGASMKHALIQNHGRGATHTRTTLVTQ 197
>gi|414876495|tpg|DAA53626.1| TPA: hypothetical protein ZEAMMB73_819224 [Zea mays]
Length = 882
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 9/121 (7%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKV-ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
+LF+ N +GA D+ V++VP G V ++ +++ + G ++ + +SNPRV+V+ E+
Sbjct: 45 NLFYDFNAVGARDVVVVHVPEGVNVADDSVHIMFAYTNSG---AEIMLMSNPRVLVVAEK 101
Query: 238 GGEVGIIEE----FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
EV I+EE VG+EG CYWAN V E++I +G +V HSY+Q+QS AAH KWT V+
Sbjct: 102 AAEVAIVEEQEHFGVGEEGG-CYWANPVAEIIIDEGARVVHSYVQHQSFAAAHTKWTVVK 160
Query: 294 Q 294
Q
Sbjct: 161 Q 161
>gi|307152986|ref|YP_003888370.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
gi|306983214|gb|ADN15095.1| FeS assembly protein SufD [Cyanothece sp. PCC 7822]
Length = 449
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 22/235 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ++R ++ T+ P++KDE +RFTD S ++ T + + D P
Sbjct: 39 LQQIRQQATATVGQLALPTKKDEEWRFTDISELQQQNFSAATPVNLTADSIKSFILPETA 98
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGDLFWSING 186
LV ++GF NLS LP+GV VG+L + +++S ++ + + ++F ++N
Sbjct: 99 NSILVFVNGFYAPELSNLSALPEGVKVGNLASIP---TEKISVYLGKQNEQTEIFSALNT 155
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D+ V++ AG V++ I L +L+V+ + PI + PRV+V+ E+ + IIE
Sbjct: 156 AGLTDVAVVWTEAGVTVDSSIQLLFLTVK------TETPIFTQPRVLVVAEKHSSLQIIE 209
Query: 246 EF------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ ++ Y+ NSV E+ + + +V HS +Q ++ + HI + + Q
Sbjct: 210 DYRVITNSCSHLSDNTYFTNSVTEIWLEENAQVNHSRIQREAGKSFHIAKSTIAQ 264
>gi|427706857|ref|YP_007049234.1| iron-regulated ABC transporter permease SufD [Nostoc sp. PCC 7107]
gi|427359362|gb|AFY42084.1| Iron-regulated ABC transporter permease protein SufD [Nostoc sp.
PCC 7107]
Length = 453
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 130/239 (54%), Gaps = 20/239 (8%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV--S 123
S+ + LQ+LR ++ + + P+ ++E +RFTD S ++ + + +P +++ V
Sbjct: 37 SVTEADGLQELRQQAANWVRHSTIPTTREEEWRFTDLSELRGVEFRK-AQPVNNVAVLKV 95
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS-DGIMKRVSDFISEFQCG-DLF 181
T LV ++G + L+ NLPDG+ VG+L G++ +G R+ ++++ + ++F
Sbjct: 96 TSLTDNRLVFVNG-VYAPELSAVNLPDGIVVGNLAGLTVEG--DRIRKYLAQAEGALEVF 152
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N G D V++V V+ PI+L ++SV G + IS PR +V+ E G +V
Sbjct: 153 TALNTAGLTDAAVVWVGKNVVVDTPIHLLFISVAG-----ETATISQPRCLVVAETGSQV 207
Query: 242 GIIEEFV------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++EEF G EG Y+ N+V EV +G+ V H+ ++ + A H+ TAV Q
Sbjct: 208 TLVEEFTNRRDTEGAEGK-SYFTNAVTEVWVGENAAVNHTRVELEGAEAFHVGKTAVNQ 265
>gi|209527508|ref|ZP_03276011.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|423062206|ref|ZP_17050996.1| FeS assembly protein SufD [Arthrospira platensis C1]
gi|209492057|gb|EDZ92409.1| FeS assembly protein SufD [Arthrospira maxima CS-328]
gi|406716114|gb|EKD11265.1| FeS assembly protein SufD [Arthrospira platensis C1]
Length = 458
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 34/270 (12%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPL--------QKLRDSSSQTLLSTPWPSRKDEPFRF 99
++ QL + SLP +P PL Q +RD+++ + P+R+ E +RF
Sbjct: 12 YLNQLLNRVRGSLP-----IPASFPLERNIAEQLQNIRDNAASWVKELAIPTRRHEDWRF 66
Query: 100 TDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYV 154
TD S + QP T S D + P LV ++GF L NLPDGV+V
Sbjct: 67 TDLSALLELPFQPATAVELSRDEISPLILPEVKGTRLVFVNGFYSPQLSCLDNLPDGVFV 126
Query: 155 GSLLGVSDGIMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
G+L + + ++ +++++ ++F ++N D V++V ++ PI+L ++S
Sbjct: 127 GNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNTSSLADAAVVWVHQNQVIDTPIHLLFIS 186
Query: 214 VEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEV 264
+ S P+ S PR +++ E G + +IE + C Y+ N+V E+
Sbjct: 187 L------SSSQPVTSQPRTLIVAEPGSKATVIEHYATANILGCSDRTQKTPYFTNTVTEL 240
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+G +++H+ LQ + ++ HI T V Q
Sbjct: 241 WVGDNAELQHTRLQRELASSFHIGRTVVSQ 270
>gi|376001922|ref|ZP_09779776.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
gi|375329833|emb|CCE15529.1| FeS assembly protein SufD [Arthrospira sp. PCC 8005]
Length = 458
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ +RD+++ + P+R+ E +RFTD S + QP T S D + P
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQPATAVELSRDEISPLILPEVK 99
Query: 131 ---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR +++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRTLIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVTELWVGDNAELQHTRLQRELASSFHIGRTVVSQ 270
>gi|170078418|ref|YP_001735056.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
gi|34765745|gb|AAQ82449.1| SufD [Synechococcus sp. PCC 7002]
gi|169886087|gb|ACA99800.1| FeS assembly protein SufD [Synechococcus sp. PCC 7002]
Length = 452
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 19/239 (7%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST- 124
Q Q +RD + + +PSR+DE +R TD S++K + QP T ++ LDV
Sbjct: 35 QSAEFQAIRDQGLEKVRQGKFPSRRDEAWRVTDLSVLKHTTFQAAQPTTPTAADLDVFAL 94
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGDLFW 182
+ LV ++G +S LPDGV+VG+ ++ ++ ++ + + D+F
Sbjct: 95 PETANSRLVFVNGHYAPDQSCVSGLPDGVFVGNFTALAADQKAAIAKYLGQQTEQLDVFA 154
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N G DL +++VP VE PI L ++ GN + + + R +V+ E G +
Sbjct: 155 ALNDAGLGDLAIVWVPKNTVVEQPIQLLFV----GNGADQPTAMQS-RCLVIAETGAQAN 209
Query: 243 IIEEFVGKEGNDC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ E+ G C Y+ N++ EV + ++ H +Q ++ A H+ TA+ Q
Sbjct: 210 VV-EYYGAIAQGCTDQDTHRYFNNALTEVWVQTNARLNHVRVQREAGGAIHLGNTAIAQ 267
>gi|307103250|gb|EFN51512.1| hypothetical protein CHLNCDRAFT_59225 [Chlorella variabilis]
Length = 495
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 23/262 (8%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ +LE +P S++ LP+PL L+ S L + P+ ++E +RFTD + +
Sbjct: 55 IERTLEVIVPESAA-LPKPLA--SLQASCLSALATLRMPTTRNEEYRFTDLRSLLQHSLG 111
Query: 112 PITRPSSSLDVSTDAQFPSLVLI-----DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P + V + DG I ++ +LP GVYVG L+G I+
Sbjct: 112 PTAGAAPDAAVRAACSLKQVAAATVVVADGVIDQQQSSIRDLPAGVYVGGLVGAPQDIVS 171
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
S + G F ++NG A D+ V++VPA + PI++ YL+ + P+
Sbjct: 172 LALGAQSRSR-GGPFATLNGAAAQDVVVVHVPASTVMPGPIHVLYLASSAAAASGGRAPV 230
Query: 227 SNPRVVVLVEEGGEVGIIEEFVG--------------KEGNDCYWANSVLEVVIGKGGKV 272
+ PR++ ++E+G I+EEF G + + Y+ ++V E + +
Sbjct: 231 AMPRLLAVLEKGAVADIVEEFAGPAAAAPLAPADAKTADSSLNYFTDAVAEFELDDSAVL 290
Query: 273 RHSYLQNQSLNAAHIKWTAVRQ 294
+HSY+Q +S AH+K T V Q
Sbjct: 291 KHSYVQLESTGVAHMKATLVNQ 312
>gi|255635600|gb|ACU18150.1| unknown [Glycine max]
Length = 276
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ +SNPRV+V+VE+G V IIE+F + ND YW+N+ E VIG+G K+ HSY+Q QS
Sbjct: 15 MHLSNPRVLVVVEKGAHVNIIEDFPASPENQNDSYWSNAAFEAVIGQGAKLTHSYIQTQS 74
Query: 282 LNAAHIKWTAVRQ 294
AAHIKWT++RQ
Sbjct: 75 FRAAHIKWTSIRQ 87
>gi|443318075|ref|ZP_21047358.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
gi|442782319|gb|ELR92376.1| FeS assembly protein SufD [Leptolyngbya sp. PCC 6406]
Length = 451
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 15/252 (5%)
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
Q L+ L ++ + +P+ LPL LR + +PS +DE +RFTD S + +
Sbjct: 23 QREACLQALLATAQAGVPESLPLTALRTQAIAIAQEQGFPSTRDEDWRFTDLSSLIAVPF 82
Query: 111 Q-PITRPSSSLDVSTDAQFPS----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
Q P T P+ Q P LV I+G + + LP+GV VGSL + + +
Sbjct: 83 QPPTTMPTVKATALAAVQLPEVSARLVFINGQFSAALSSTETLPNGVAVGSLAQLHNSPL 142
Query: 166 KRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
D G DLF ++N G D V++V V PI + YLS+ +
Sbjct: 143 GDQIDVRLGHAGGQQDLFSALNTAGFQDGAVVWVSQFQTVAAPIQILYLSI------PQD 196
Query: 224 LPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
PI S PR +V+ E + +IE+F G D + SV EV + +V H LQ +
Sbjct: 197 QPIVSYPRCLVVAEAASTLTLIEDFYGTGTGD-HLNTSVTEVWVDDTAQVNHVRLQREGS 255
Query: 283 NAAHIKWTAVRQ 294
HI TAV Q
Sbjct: 256 GTFHIGKTAVSQ 267
>gi|428772613|ref|YP_007164401.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
stanieri PCC 7202]
gi|428686892|gb|AFZ46752.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium stanieri PCC 7202]
Length = 457
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 124/237 (52%), Gaps = 22/237 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFP 129
+++L+ + ++ ++ + P+ +DE +RFTD + ++ + T+ + S LD + P
Sbjct: 43 IEQLKQTFAKVVVKSNIPTNRDEAWRFTDLTALQKTDFHAPTKQNLSDSILDGFKLQEAP 102
Query: 130 S--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
+ LV ++GF + ++S LPDGVYVG+L G+ ++VS+F+ + ++F ++N
Sbjct: 103 NSRLVFVNGFYDENLSDVSALPDGVYVGNLAGLDGSKKEKVSNFLGQNHSDNEVFSALNT 162
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D V++V +V+ PI+L ++ V + LPI PR++++ E II
Sbjct: 163 AGINDAFVVWVDKNVEVDIPIHLLHI------VAKEDLPILVQPRILMVGEVNSRCQII- 215
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ G C Y+ N V E+ + + + H +Q +S + HI +A+ Q
Sbjct: 216 EYYGATSVGCSDAVGGKPYFTNVVTEIHLQENASLNHCRIQRESGDGFHIAQSAIAQ 272
>gi|218187437|gb|EEC69864.1| hypothetical protein OsI_00223 [Oryza sativa Indica Group]
Length = 283
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +SNPRV+V+ E+G EV IIEE G+E CYWAN V+E+++ + KV HSY+Q QS
Sbjct: 20 MMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFA 79
Query: 284 AAHIKWTAVRQ 294
AAH KWT V+Q
Sbjct: 80 AAHTKWTVVQQ 90
>gi|308806105|ref|XP_003080364.1| unnamed protein product [Ostreococcus tauri]
gi|116058824|emb|CAL54531.1| unnamed protein product [Ostreococcus tauri]
Length = 430
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVS---TDA 126
L ++ + + L P+ ++E +RFTD S + ++ + P R + D S
Sbjct: 18 LAVKNASEEARALLEGAKAPTTRNEEYRFTDFSALTTAAFVGP--REDARCDASGTKVAE 75
Query: 127 QFPSLVLIDGFIQNSALNLSNLPD-GVYVGSLLGVSD---GIMKRVSDFISEFQCGDLFW 182
+VL+DG + + +L+N GV V +G D G+ V G++F
Sbjct: 76 ACARIVLVDGALDATQSDLTNAAKAGVDV--RVGEGDETTGVQSAVR--------GNVFS 125
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+IN A D+ V+ V G K PI++ LS G DS + +S PRV +++EE E+
Sbjct: 126 AINSASASDVVVVKVAKGVKCAMPIHIVTLSTGG---DSGAMRVSAPRVTIVLEEDAELS 182
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E+F G EG YW N V E+ + KG ++HS +QN +A H + T V Q
Sbjct: 183 VVEDFAG-EGETEYWQNGVCEITLAKGASMKHSLIQNHGRSATHTRTTLVTQ 233
>gi|291567130|dbj|BAI89402.1| FeS assembly protein SufD [Arthrospira platensis NIES-39]
Length = 458
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 121/237 (51%), Gaps = 21/237 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR++++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRILIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQ 270
>gi|428204624|ref|YP_007083213.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
gi|427982056|gb|AFY79656.1| FeS assembly protein SufD [Pleurocapsa sp. PCC 7327]
Length = 449
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---MIKSSQIQPITRPSSSLDVST--DAQ 127
+++LR + +L + PS++DE +RFTD S I + T + L+ T +A+
Sbjct: 42 IEELRRQAVSQVLESRIPSKRDEEWRFTDLSDLLQISFQVAEKATVAAGDLERLTLPEAK 101
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSING 186
+V ++GF ++S LP+ VYVG+L+ + D ++ +++ + ++F ++N
Sbjct: 102 QSRIVFVNGFYSPELSDVSGLPESVYVGNLVDLPDAQNDKIVKYLARQEDATEIFTALNT 161
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D+ VI+ VE PI + +LSV G + + PR++V+ E G + ++E
Sbjct: 162 SGLIDVAVIWANPNVIVETPIQVLFLSVSGSSPSFSQ-----PRLLVVAETGSSLELVE- 215
Query: 247 FVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
F G G + Y+ N+V E+ + +VRH+ +Q +S HI A+ Q
Sbjct: 216 FYGAVGKNTPYFTNAVTEIWVQDNAQVRHNRIQQESATGFHIAKNAIAQ 264
>gi|409990930|ref|ZP_11274242.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
gi|409938204|gb|EKN79556.1| FeS assembly protein SufD [Arthrospira platensis str. Paraca]
Length = 458
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 121/237 (51%), Gaps = 21/237 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
LQ +RD+++ + P+R+ E +RFTD S + +++ ++R S + + +
Sbjct: 40 LQNIRDNAASWVKELAIPTRRHEDWRFTDLSALLELPFQAATAVELSREEISPLILPEVK 99
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++GF L NLPDGV+VG+L + + ++ +++++ ++F ++N
Sbjct: 100 GTRLVFVNGFYSPQLSCLDNLPDGVFVGNLGQLDKPLSDKLGNYLTQQPDSQEVFTALNT 159
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D V++V ++ PI+L ++S+ S P+ S PR++++ E G + +IE
Sbjct: 160 SSLADAAVVWVHQNQVIDTPIHLLFISL------SSSQPVTSQPRLLIVAEPGSKATVIE 213
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ C Y+ N+V E+ +G +++H+ LQ + ++ HI T V Q
Sbjct: 214 HYATANILGCSDRTQKTPYFTNTVAELWVGDNAELQHTRLQRELASSFHIGRTVVSQ 270
>gi|398893986|ref|ZP_10646416.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
gi|398183118|gb|EJM70613.1| FeS assembly protein SufD [Pseudomonas sp. GM55]
Length = 439
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 23/239 (9%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST---- 124
P L++LR ++ Q + +P+ KDE +++T + I + ++P P +S +S
Sbjct: 21 HPAWLRELRSAAFQWVAEHGFPTAKDEAWKYTRVAPILETSLRP-AEPGTSRGLSDASIE 79
Query: 125 ----DAQFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSDFISEFQC 177
D P LV ++G+ L LP G V +LL G+++ + F F+
Sbjct: 80 RLIGDYGGPRLVFVNGYFAAEFSVLEELPPGTQVTHFATLLRADSGMLEAL--FSHAFRT 137
Query: 178 G-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLV 235
F ++N A D ++ +PA VE PI+L + S D+ P+ ++PR +VL+
Sbjct: 138 QPQAFTALNAALAEDGALVQIPAHTTVEKPIHLVFFS------DTGATPLMTHPRALVLM 191
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G + ++E VG G + Y +N+V EV++ + H +QN+S A H+ VRQ
Sbjct: 192 GAGSRLTLVESHVGS-GAEAYLSNAVSEVLLDADAVLEHYSVQNESTAAFHVALLNVRQ 249
>gi|303277771|ref|XP_003058179.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226460836|gb|EEH58130.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 492
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 23/238 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-------VSTD 125
++ LR + L P+ + E FRFTD + + + Q P +S D
Sbjct: 68 VESLRAGAVTQLARARMPTSRAEEFRFTDLAPLLTKQ--PTAADASKADDVDASAWTFEA 125
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF-----ISEFQCGDL 180
A +VL+DG + ++ + G G+ + VS + ++ G +
Sbjct: 126 ASASRVVLVDGVFRADKSSIDAIAKG---GAKISVSAAAAGDAAPPAALGSMTSTGRGGV 182
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
S+N + A D + VPAG ++ PI++ LS G D+ +L S PR+V+ V E
Sbjct: 183 LASLNAVMASDFVHVDVPAGVTLDVPIHIVQLSTSGD--DAAELSSSAPRIVITVGERAS 240
Query: 241 VGIIEEFV---GKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V ++EEF G + C YW N V E+VI K G+V H+ +Q Q+ NA H + T + Q
Sbjct: 241 VEVVEEFAPAPGVSDDACGYWHNGVCEIVIEKDGRVTHAMVQAQTRNAVHTRLTTLTQ 298
>gi|16331746|ref|NP_442474.1| hypothetical protein slr0076 [Synechocystis sp. PCC 6803]
gi|383323489|ref|YP_005384343.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326658|ref|YP_005387512.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492542|ref|YP_005410219.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437810|ref|YP_005652535.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|451815898|ref|YP_007452350.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
gi|3024874|sp|Q55792.1|Y076_SYNY3 RecName: Full=UPF0051 protein slr0076
gi|1001707|dbj|BAA10544.1| slr0076 [Synechocystis sp. PCC 6803]
gi|339274843|dbj|BAK51330.1| hypothetical protein SYNGTS_2582 [Synechocystis sp. PCC 6803]
gi|359272809|dbj|BAL30328.1| hypothetical protein SYNGTI_2581 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275979|dbj|BAL33497.1| hypothetical protein SYNPCCN_2580 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359279149|dbj|BAL36666.1| hypothetical protein SYNPCCP_2580 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407960620|dbj|BAM53860.1| hypothetical protein BEST7613_4929 [Bacillus subtilis BEST7613]
gi|451781867|gb|AGF52836.1| hypothetical protein MYO_126070 [Synechocystis sp. PCC 6803]
Length = 453
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 119/234 (50%), Gaps = 24/234 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------P 129
R ++ L S P ++DE ++FTD S +K+ I + SLDV+ F
Sbjct: 44 RQGAADLLGSLRLPHKRDEEWQFTDLSELKA--IDFVAAGKVSLDVAAAENFYLPEAHQS 101
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV I+GF N ++LP + S ++ +++++++ + G ++F ++N G
Sbjct: 102 RLVFINGFFTPELSNTNDLPSAITCQSWTNLAAHQREQLANYLGQKTDGNEVFSNLNTAG 161
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D V+++PA ++++PI+L +L+V VD + + PR++V+VE +V I E +
Sbjct: 162 MTDSAVVWIPANTELKSPIHLLFLTV----VDPTPIMVQ-PRLLVVVENNAQVTIAESY- 215
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G +C Y+ N V E+ +G+ +V H Q S ++ HI TA+ Q
Sbjct: 216 GAISTNCTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQRDSGDSFHIATTAIAQ 269
>gi|126660041|ref|ZP_01731162.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
gi|126618638|gb|EAZ89386.1| hypothetical protein CY0110_12152 [Cyanothece sp. CCY0110]
Length = 449
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 119/237 (50%), Gaps = 22/237 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQ 127
+Q LR ++ + PS+KDE +RFTD S + ++++ + +T+ + +AQ
Sbjct: 34 VQTLRKNAVSQVQELTLPSKKDEEWRFTDLSELYQLNFQTAKTETVTQTIIDNFILPEAQ 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + N+S L + +Y+G+L + D ++++++ + Q G D F ++N
Sbjct: 94 QSYLVFVNGEYSSELSNVSGLSEDIYIGNLGHLPDAKNSKIANYLGK-QEGEKDAFTALN 152
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGII 244
G D VI+ +E PI L +L+V GN PI PR +V+ E G + +
Sbjct: 153 TAGFKDAAVIWANKNSVIETPIQLLFLTV--GN----DTPILIQPRTLVIAETGSSLSFV 206
Query: 245 EEFV-------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E + E N Y+ NSV E+ + ++ HS +Q + ++ HI +A+ Q
Sbjct: 207 EYYATVTESCSDDEKNQPYFTNSVTEIWLENNAQINHSRIQRELGDSFHIGKSAISQ 263
>gi|440681297|ref|YP_007156092.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
gi|428678416|gb|AFZ57182.1| Iron-regulated ABC transporter permease protein SufD [Anabaena
cylindrica PCC 7122]
Length = 447
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 21/232 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
LQ LRD ++ + + P+ ++E +RFTD S +K + SL+ D P
Sbjct: 42 LQGLRDVAANWVRHSVIPNTREEEWRFTDLSPLKQVKFNLGMFEEISLE---DYILPEVS 98
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV ++G + N NLP G+ VG+L +S ++++ ++++ + ++F ++N
Sbjct: 99 QRLVFVNGVYSPNLSNTENLPSGLMVGNLDVLSGEVLRK---YLAQAEGANEVFTALNTA 155
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
G D V++V VE+PI+L ++SV G + IS PRV+V+ E G +VG+IEE+
Sbjct: 156 GLCDAAVVWVGKNVVVESPIHLLFVSVSG-----ESATISQPRVLVVAECGSQVGLIEEY 210
Query: 248 VGK-----EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + Y+ N V E+ + + +V HS + + A H+ TAV Q
Sbjct: 211 TNRPDAENAEEEVYFTNGVTEIWVHENAQVSHSRVVWEGDAAFHVGKTAVTQ 262
>gi|224126311|ref|XP_002329523.1| predicted protein [Populus trichocarpa]
gi|222870232|gb|EEF07363.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 44/50 (88%), Gaps = 2/50 (4%)
Query: 247 FVGKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
FV KEGND YWAN VLEVVIGKG KVRHSY+Q+QSLN+AHIKWTAVRQ
Sbjct: 15 FVSKEGNDDKRYWANPVLEVVIGKGAKVRHSYVQSQSLNSAHIKWTAVRQ 64
>gi|443323166|ref|ZP_21052175.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
gi|442787076|gb|ELR96800.1| FeS assembly protein SufD [Gloeocapsa sp. PCC 73106]
Length = 440
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---PITRPSSSLDVST--DAQ 127
+ +L + + L + P + DE +RFTD S +K ++ P+ +L+ T +AQ
Sbjct: 29 ITELSNQALTALANQSLPQKSDEDWRFTDLSELKKLSLRLASPVEVTKQALEQFTLPEAQ 88
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSING 186
+V ++G + + S LP G+Y+G+L G+ + + +++S ++Q D+F +N
Sbjct: 89 HSRIVFVNGVYVSELSDTSGLPPGIYLGNLAGLEEAKKPELIEYLSRDYQ--DVFSLLNT 146
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
G D+ + +V V PI+L YL+V + PI PR +V+ ++ ++ I+
Sbjct: 147 GGLKDIAIAWVEPDVVVTTPIHLLYLTVPESD------PILVQPRTLVVAQKNSQLEIV- 199
Query: 246 EFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ G DC Y N+V ++V+ + +++HS +Q +S + I T V Q
Sbjct: 200 EYYGAITQDCSDQPHNLPYCNNAVTDIVLHENAQLKHSRVQRESGDGLSIANTCVEQ 256
>gi|425469710|ref|ZP_18848623.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880400|emb|CCI38830.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 441
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV VG+L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVGNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|434395013|ref|YP_007129960.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
gi|428266854|gb|AFZ32800.1| Iron-regulated ABC transporter permease protein SufD [Gloeocapsa
sp. PCC 7428]
Length = 468
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 117/241 (48%), Gaps = 26/241 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ--PITRPSSSLDVST---DAQ 127
L+ +RD ++ + + +P+ +DE +RFTD S +K + Q P+ P + +A
Sbjct: 54 LEAIRDRATAIVHQSKFPTTRDEEWRFTDVSPLKQVKFQAAPLVVPDLAALKPLLLPEAD 113
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-QCGDLFWSING 186
LV ++G I L+ L DGV +L + R+ +++++ ++F ++N
Sbjct: 114 RSRLVFVNG-IYAPELSAVVLSDGVVASNLDRLPPAYRSRLENYLAQIPGTEEVFTALNT 172
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIE 245
D+ V+++P VE PI+L ++S + PI + PR +V+ E G + +IE
Sbjct: 173 AAIADVAVVWIPKNVVVETPIHLLFVST------ASVAPIVTQPRCLVVAESGSSITLIE 226
Query: 246 EFV------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++ + G Y+ N+V E+ + + +V H+ ++ S A HI TA+
Sbjct: 227 DYFNQITNLEAEESEAEVGEPIYFTNAVTEIWLEENAQVNHTRIERDSPEAFHIGKTAIA 286
Query: 294 Q 294
Q
Sbjct: 287 Q 287
>gi|443667505|ref|ZP_21133952.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
gi|159027408|emb|CAO86892.1| sufD [Microcystis aeruginosa PCC 7806]
gi|443330996|gb|ELS45677.1| feS assembly protein SufD [Microcystis aeruginosa DIANCHI905]
Length = 441
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + QP+T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQPVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPSGVRVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHNLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|300863813|ref|ZP_07108738.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
gi|300338161|emb|CBN53884.1| FeS assembly protein SufD [Oscillatoria sp. PCC 6506]
Length = 446
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 22/237 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-------MIKSSQIQPITRPSSSLDVSTD 125
L+ LRD +++ +L+ +P+ KDE +RFT+ S + ++ I +L VS+
Sbjct: 34 LKDLRDIATEYVLAAAFPTTKDEEWRFTNLSPLLEIPFQVAENKQLDIGLSDITLPVSSK 93
Query: 126 AQFP-SLVLIDGFI--QNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSDFISEFQC-G 178
P LV ++G+ Q S++ S LP Y G+L R+ + +S+ Q
Sbjct: 94 EDLPLRLVFVNGYYAPQLSSVQSSLLPTLALEFYAGNLSNAPGPYHARIREHLSKHQQQS 153
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
++F ++N G D V++VP ++ PI+L + ++ G P+ P +V+ E
Sbjct: 154 EVFSALNIAGLVDAAVVFVPQDKAIDTPIHLLFFTIAGAT------PVMCQPHCLVIAEP 207
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G + ++E++ GN + N++ E+V+G+ V H +Q + +A HI + + Q
Sbjct: 208 GSSITLVEDY-ATIGNVSTFTNAMTEIVVGENATVNHLRIQREGGDAFHIGKSTISQ 263
>gi|354567898|ref|ZP_08987065.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
gi|353541572|gb|EHC11039.1| FeS assembly protein SufD [Fischerella sp. JSC-11]
Length = 446
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 16/229 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ++RD ++ + + P+ +DE +RFTD S ++ + T + SL D+ +A
Sbjct: 45 LQQVRDRAANWVRHSVLPTTRDEEWRFTDLSALRQVKFNVETLHAKSLQPDILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-GIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G ++ LP GV V +L S G+ K ++ D+F ++N G
Sbjct: 105 LVFVNGIYVPELSVVAGLPKGVVVSNLDAASQLGVQKYLARAEGAL---DVFTALNTAGI 161
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV- 248
D+ V++VP VE PI+L +++ + IS PR +V+ E G +V ++EE+
Sbjct: 162 NDVAVVWVPKDVVVETPIHLVFIAA------GDQPFISQPRCLVVAESGSQVSLVEEYRN 215
Query: 249 ---GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K + Y +N+V E+ + +V H+ ++ S A HI TAV Q
Sbjct: 216 RHDAKNAKEVYLSNAVTEIWLEDNAQVNHTRVEWDSREAFHIGKTAVTQ 264
>gi|427722164|ref|YP_007069441.1| iron-regulated ABC transporter permease SufD [Leptolyngbya sp. PCC
7376]
gi|427353884|gb|AFY36607.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7376]
Length = 450
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 42 ATFSDPF---------VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
A+F +P ++QLAE+ + S+ L++LR + + +P++
Sbjct: 9 ASFDNPITMLDLSLSPLLQLAETNKTVFNQGSTGW-----LKELRTQGAYKVSHAIFPTK 63
Query: 93 KDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTD---AQFPSLVLIDGFIQNSALNLSNL 148
+DE +R TD S +++++ + T + D++T+ LV ++G N L
Sbjct: 64 RDEDWRVTDISTLRATRFLNAKTYELDAADIATELVGEAIHQLVFVNGKFSAELSNTEEL 123
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
P+G++VG+L +S + + +I + D+F ++N G D+ +I+ VE PI
Sbjct: 124 PEGLFVGNLAQLSADQAEELIKYIGVHSRERDVFAALNNAGFHDVAIIWAEKNVVVEAPI 183
Query: 208 YLKYLSVEGGN---VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK-EGNDCYWANSVLE 263
+ +++ G + ++ L I++P +IE++VG+ G Y+ N++ E
Sbjct: 184 QVLFVNQAAGRPTAMQTRCLAIASP--------SSSFSLIEQYVGRGSGEQTYFNNALTE 235
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + + +++H +Q + NA HI T V Q
Sbjct: 236 IFVQENAEIKHVRVQQEIPNATHISNTIVGQ 266
>gi|158334401|ref|YP_001515573.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
gi|158304642|gb|ABW26259.1| FeS assembly protein SufD [Acaryochloris marina MBIC11017]
Length = 434
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVST 124
P P L+K+R+ + + PS +DE +RFTD S + + T S SL D
Sbjct: 32 PNPQGLEKVREGALSIVQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIDAFI 91
Query: 125 DAQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + +LP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSTIDHLPAGLSVSTLADAGN-----LPELGQQPGLSEVFTA 146
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D+ V+ + +E PI+L YL+ + I++PR +V+ E +
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPI------ITSPRGLVIAEANSAATL 200
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IEE+ Y+ NSV+EV +G+ ++ H +Q ++ A HI T+V Q
Sbjct: 201 IEEYAAVNAA-SYFTNSVMEVSLGQNAQLHHHRIQREAKTAFHIGTTSVSQ 250
>gi|427417545|ref|ZP_18907728.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
gi|425760258|gb|EKV01111.1| Iron-regulated ABC transporter permease protein SufD [Leptolyngbya
sp. PCC 7375]
Length = 426
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 116/252 (46%), Gaps = 32/252 (12%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQI 110
L E LE + S+ S PL L LR ++ + +PS +DE +RFTD +SM++ S
Sbjct: 14 LGELLEQAALSAKQS---PLGLDALRAAARALVQERTFPSNRDEDWRFTDLSSMLEMSFQ 70
Query: 111 QP-------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
P I L + LV ++G +S LSN+ DG V S
Sbjct: 71 APGALKDAVIAEAKQQLANISLGDTARLVFVNGIFADS---LSNISDGTSVLSQ------ 121
Query: 164 IMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ D +++ Q ++F ++N G D V+++ +E PI + YL++ G
Sbjct: 122 -AEATPDALAQIQGSNEVFTALNTAGFTDAAVLHIKKNTAIEQPIQIVYLTIGHG----- 175
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
PR +V+ E G V ++EEF G+ + NSV EV + +V H LQ +S
Sbjct: 176 --LFVQPRCLVVAEAGSAVTLVEEF---HGSGASFTNSVSEVWVHDNAEVTHLRLQQESS 230
Query: 283 NAAHIKWTAVRQ 294
A HI TAV Q
Sbjct: 231 EAVHIGKTAVSQ 242
>gi|422303635|ref|ZP_16390986.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791391|emb|CCI12817.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 441
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|434384446|ref|YP_007095057.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
gi|428015436|gb|AFY91530.1| FeS assembly protein SufD [Chamaesiphon minutus PCC 6605]
Length = 433
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 18/231 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD-------VSTD 125
L +LR ++ L PS KDE +RFT+ + + Q T P++ + V +
Sbjct: 27 LLELRTQAAGYLQEETLPSNKDEEWRFTNLDPLLT---QTFTAPATQVPLVNINGLVLPE 83
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSI 184
A LV ++G +L++LP GV+VG+L ++ +S ++ + G+ +F +I
Sbjct: 84 AINTRLVFVNGIYAPLLSSLADLPAGVFVGNL-AAANATGLAISTYLGKQPGGEEVFTAI 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N G + V+++ +E PI+L +++ VD + + PR ++++E+ +I
Sbjct: 143 NTAGINEAAVLWLAPDIVLETPIHLLFITT----VDDTAIA-TQPRTLIVLEQRSSATLI 197
Query: 245 EEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+E++ D Y+ N+V EV +G K+ H+ +Q++ + A HI TAV Q
Sbjct: 198 QEYLHTSIPDRSYFNNAVTEVWLGDTAKLNHTRIQDEDITAIHIGKTAVSQ 248
>gi|390440154|ref|ZP_10228505.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836438|emb|CCI32631.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 441
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|425452572|ref|ZP_18832389.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765610|emb|CCI08566.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 441
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 HLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|428771190|ref|YP_007162980.1| iron-regulated ABC transporter permease SufD [Cyanobacterium
aponinum PCC 10605]
gi|428685469|gb|AFZ54936.1| Iron-regulated ABC transporter permease protein SufD
[Cyanobacterium aponinum PCC 10605]
Length = 455
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 69 QPLPL--------QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS 117
QPL L Q++R ++ ++ P+ KDE +RFTD S + + QP +
Sbjct: 27 QPLHLEGKLQTIVQEIRRKAANKVVKLNLPTTKDESWRFTDLSELYKQDLVYAQPQDLEN 86
Query: 118 SSLD--VSTDAQFPSLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVSDGIMKRVSDFISE 174
+L + +A LV ++G+ Q + + S L + +YVG+L + D ++++ ++++
Sbjct: 87 QTLQEFILKEASNSRLVFVNGYYQANLSDTSGLNSEQIYVGNLTNLDDDKQEKIAQYLAK 146
Query: 175 FQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ ++F ++N D V++V A +++ PI+L +LSV+ K PR++V
Sbjct: 147 NEPENEVFTALNSTSLNDAFVVWVKANQEIKTPIHLLHLSVK-----EKTGSWHQPRILV 201
Query: 234 LVEEGGEVGIIEEFVGKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+ E + I E+ G C Y+ N+V E+ + +V H+ +Q +S +
Sbjct: 202 VAEANSVLEFI-EYYGATSFGCSDSARQQYYFTNAVTEIHLLDNAQVNHNRIQRESGDGF 260
Query: 286 HIKWTAVRQ 294
HI T V Q
Sbjct: 261 HIAQTMVNQ 269
>gi|434407798|ref|YP_007150683.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
gi|428262053|gb|AFZ28003.1| Iron-regulated ABC transporter permease protein SufD
[Cylindrospermum stagnale PCC 7417]
Length = 456
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 118/231 (51%), Gaps = 16/231 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPS 130
LQ+LRD ++ + + P+ ++E +RFTD S ++ Q + SL ++ +A
Sbjct: 45 LQELRDGAANWVRHSTIPTTREEEWRFTDLSELRKVQFNLGRLETISLQPNILPEAANSR 104
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMGA 189
LV ++G +++LP G+ V +L + + + V F+++ + ++F ++N G
Sbjct: 105 LVFVNGVYAPELSAVADLPRGIVVSNLALLDN--YQVVQPFLAQSEGAREVFTALNTAGL 162
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D V+ V VE PI+L ++SV G + S PR +V+ E G +V ++EEF
Sbjct: 163 TDAAVVLVGKNVVVETPIHLLFVSVVG-----ETPTFSQPRCLVVAESGSQVTLVEEFTN 217
Query: 250 KEG------NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ Y+ N+V E+ + + +V H+ ++ + A H+ TAV Q
Sbjct: 218 RQDAKSAKEEGVYFTNAVTEIWLAENAEVSHTRVEMEGAGAIHVGKTAVTQ 268
>gi|425456922|ref|ZP_18836628.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389801855|emb|CCI19029.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 441
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P +KDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGKKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVAANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|220908817|ref|YP_002484128.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
gi|219865428|gb|ACL45767.1| FeS assembly protein SufD [Cyanothece sp. PCC 7425]
Length = 451
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 19/230 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ---IQPITRPSSSLDVSTDAQFP 129
+Q LRD ++ P+ ++E +RFTD S +++ Q I P P+ + +S
Sbjct: 48 VQDLRDRATALAQELTIPTTREEEWRFTDLSPLRTVQFTAIAPEQSPARAEQISGFVLPE 107
Query: 130 S---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSI 184
S LV ++G +L +P G+ VG+L G + +++ ++++ Q G ++F +
Sbjct: 108 SSLRLVFVNGRFAPELSDLQAIPSGLKVGTLAGQT----AQLNPYLAQ-QAGSEEIFTVL 162
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N D VI V ++E P++L +++V + I++PR +V+ E + ++
Sbjct: 163 NTASFSDAAVIQVDRNQQIEAPLHLLFIAV-----PTSTPTIAHPRCLVMAETSSRLTLV 217
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EE+V G N+V E+ +G +V H +Q Q+L+ HI TAV Q
Sbjct: 218 EEYV-TVGTGVQLTNAVTEIWLGSNAEVNHIRIQAQALDGFHIGKTAVSQ 266
>gi|425446491|ref|ZP_18826494.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733251|emb|CCI02948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 441
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVST--DAQFP 129
+LR+S + P RKDE ++FTD S + + Q +T ++L V +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFCAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RLVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|416376182|ref|ZP_11683447.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
gi|357266426|gb|EHJ15056.1| Iron-sulfur cluster assembly protein SufD [Crocosphaera watsonii WH
0003]
Length = 449
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIVDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D VI++ +E PI + +L+V S+ + PR +V+ E G ++E
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAV-----SSETASLIQPRTLVIAETGSSATLVEY 208
Query: 247 F-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + + N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q
Sbjct: 209 YGTITEQSLDVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQ 263
>gi|359463776|ref|ZP_09252339.1| FeS assembly protein SufD [Acaryochloris sp. CCMEE 5410]
Length = 434
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-- 125
P P L+K+R S+ + PS +DE +RFTD S + + T S SL+
Sbjct: 32 PNPKGLEKVRASALSIIQERGLPSNRDEDWRFTDLSGLYKTAFTAPTAASLSLEEIAPFI 91
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV ++G+ + NLP G+ V +L + + + + ++F +
Sbjct: 92 LAEAPVRLVFVNGWFAPDLSEIDNLPAGLSVSTLADAGN-----LPELGQQPGMTEVFTA 146
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D+ V+ + +E PI+L YL+ + +++PR +V+ E +
Sbjct: 147 LNTASFADVAVLRIAKNQVIEAPIHLLYLTTGDTPI------VTSPRGLVVAEANSAATL 200
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IEE+ + Y+ N+V EV +G+ ++ H +Q ++ A HI TAV Q
Sbjct: 201 IEEYTAVK-TASYFTNAVTEVSLGQNAQLHHYRIQREAKTAFHIGTTAVSQ 250
>gi|425439775|ref|ZP_18820090.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719921|emb|CCH96312.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 441
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + + Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRVPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D+ VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDVAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|425438288|ref|ZP_18818693.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676593|emb|CCH94429.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 441
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 CIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKNPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|425463003|ref|ZP_18842466.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389823782|emb|CCI27750.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 441
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAQELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEHCSDLPVNYSYFTNAVTEIYLEVNAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|428220268|ref|YP_007104438.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
gi|427993608|gb|AFY72303.1| FeS assembly protein SufD [Synechococcus sp. PCC 7502]
Length = 434
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----------SQIQPITRPSSS 119
P L+ LR +S L +P+ KDE +R D S ++ PIT P +
Sbjct: 20 PAWLRTLRSEASDRLNYLKFPTPKDEEWRNNDFSELRDIGFALVNAVDKSEDPITNPINI 79
Query: 120 LDVST--DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-----LGVSDGIMKRVSDFI 172
LD ++ + IDG L LP GV++GSL LG+ + +S +
Sbjct: 80 LDAHILPESAESLITFIDGRFSIEFSALEGLPTGVFIGSLNNFNHLGID--LTASLSPHL 137
Query: 173 SEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
++ D F ++N D+ V+Y+P + L + S + IS PR
Sbjct: 138 GKYADAEDFFVALNTASIDDVAVVYIPKNLNFIPTVQLLFASHQN--------TISQPRC 189
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
+V+VE GG + ++E +G++ ++ NSV E+ +G ++ H+ +Q +S A I A
Sbjct: 190 LVIVESGGSLNLVETHIGQDS--LHFCNSVTEIYVGANARINHTKVQTESDQAIWISNCA 247
Query: 292 VRQ 294
+ Q
Sbjct: 248 IVQ 250
>gi|67920339|ref|ZP_00513859.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
gi|67857823|gb|EAM53062.1| FeS assembly protein SufD [Crocosphaera watsonii WH 8501]
Length = 449
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 18/235 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSSSLDVSTDAQ 127
L LR ++ + P +KDE +RFTD S + + + +++ + +A+
Sbjct: 34 LHTLRKNAVSQVQELTLPKKKDEEWRFTDLSKLYELDLTIGKTEAVSKNIIDQFILPEAK 93
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSING 186
LV ++G + N+S L +GV VG+L +SD +++ +++ + + D F ++N
Sbjct: 94 QSYLVFVNGEYASELSNVSALSEGVSVGNLSHLSDAQTEKIVNYLGKSEGEKDTFSALNT 153
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
G D VI++ +E PI + +L+V S+ + PR +V+ E G ++E
Sbjct: 154 AGLSDAAVIWINKNVVLETPIMVLFLAV-----SSETASLIQPRTLVIAETGSSATLVEY 208
Query: 247 F-------VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + + N+ Y+ NSV E+ + + H+ +Q + N+ HI + + Q
Sbjct: 209 YGTITEQSLYVKQNEPYFTNSVTEICLDGNAHINHNRIQRELGNSFHIGRSIITQ 263
>gi|440756054|ref|ZP_20935255.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
gi|440173276|gb|ELP52734.1| feS assembly protein SufD [Microcystis aeruginosa TAIHU98]
Length = 441
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + ++ + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALAVFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|148360747|ref|YP_001251954.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296106188|ref|YP_003617888.1| ABC transporter permease [Legionella pneumophila 2300/99 Alcoy]
gi|148282520|gb|ABQ56608.1| ABC transporter, permease component [Legionella pneumophila str.
Corby]
gi|295648089|gb|ADG23936.1| ABC transporter, permease component [Legionella pneumophila 2300/99
Alcoy]
Length = 428
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 26/233 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+N GV IY+PAG +E PI LK++ + + R ++L+E+ +
Sbjct: 136 YLN-TAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MHLRHLILMEKESQA 187
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 188 TLIEEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|307609399|emb|CBW98888.1| hypothetical protein LPW_06751 [Legionella pneumophila 130b]
Length = 428
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVSTDAQFP 129
L +L+ + L +P+R DE +++T + P +P+ V D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALK-TVFDDSPVK 80
Query: 130 SLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F +
Sbjct: 81 NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYAD-LVKPYLGKIVEQEHG--FHYL 137
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N IY+PAG +E PI LK++ + R ++L+E+ + +I
Sbjct: 138 NTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQATLI 190
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 191 EEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|292490818|ref|YP_003526257.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
gi|291579413|gb|ADE13870.1| FeS assembly protein SufD [Nitrosococcus halophilus Nc4]
Length = 447
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--S 117
L S QP L++LR + S +P K+E +++T + + P+ +
Sbjct: 18 LESEQVGAVQPW-LRELRQQALGQFQSMGFPGPKNEDWKYTRVRALAETAFTPVVSSPVA 76
Query: 118 SSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
SLD P LV +DG + LP G VGSL +DG+ +
Sbjct: 77 VSLDECQGYFLPDMPCFRLVFVDGRFVPGLSEIEELPQGAVVGSL---ADGLKQEGEGLR 133
Query: 173 SEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
S F F ++N D +Y+PA + P++L +++ G D+ ++
Sbjct: 134 SVFAGYADHHNQPFTALNTAFMADGAYLYLPAKAVLTKPVHLLFITT--GRSDA---VVT 188
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+PR ++++E E+ +IE + G ND Y+ N+V EVV+G+G KV H LQ ++ + H
Sbjct: 189 HPRNLMILEPESELTVIEHYAGL--NDGVYFTNAVTEVVMGRGAKVEHIKLQEEAAKSFH 246
Query: 287 IKWTAVRQ 294
I V+Q
Sbjct: 247 IATVQVQQ 254
>gi|397666278|ref|YP_006507815.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395129689|emb|CCD07922.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L + +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKHSGFPTRYDEEWKYTLVDSLLQQHFVPPDPAVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|373488168|ref|ZP_09578833.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
gi|372006493|gb|EHP07125.1| Iron-regulated ABC transporter permease protein SufD [Holophaga
foetida DSM 6591]
Length = 422
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 12/232 (5%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS 117
D LP +++ +P + LR + L +P+ K E +++TD + +K+ +P
Sbjct: 6 DFLPEVAAA-SRPKEWETLRAKAETHLDGKSYPAPKAEDWKYTDLAPLKTLAPKPGIHAC 64
Query: 118 SSL--DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+ + +++ LV ++G N S LP GV + L S+ + +
Sbjct: 65 VDIRGHILPESRGARLVFVNGHYDPHYSNASGLPPGVRMLQLASASE-AASALGTLATPE 123
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
C D+F ++N D IYVP G +VE +++ ++ G D + ++PR++V++
Sbjct: 124 TC-DVFANLNTAKFADGAFIYVPKGLQVEPVLHVCFM----GAPDGDQATCAHPRLLVVL 178
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
E+G E+ ++EE+ G Y+ N++ EV++ G ++RH +Q +S A H+
Sbjct: 179 EKGAELHLVEEY---SGQGSYFTNALTEVIVKDGAELRHERIQLESPEAIHL 227
>gi|166365048|ref|YP_001657321.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|425465457|ref|ZP_18844766.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166087421|dbj|BAG02129.1| Fe-S cluster assembly protein [Microcystis aeruginosa NIES-843]
gi|389832299|emb|CCI24210.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 441
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 24/234 (10%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSLDVSTDAQFP 129
+LR+S + P RKDE ++FTD S + ++ Q I + + + + +A+
Sbjct: 33 ELRESGASKAHELAIPGRKDEEWQFTDLSQLWAIDFRAPQTVTIDKNALATFLLPEAKNS 92
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+V ++G Q ++S LP GV V +L ++ +++ + + + F ++N G
Sbjct: 93 RIVFVNGIYQPELSDISALPPGVSVSNLANAQKDVL---VNYLGKEKTPEFFTALNQAGL 149
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV 248
D VI+V A V PI+L +++V +++P P +++ E G V IIE +
Sbjct: 150 SDGAVIHVTANTVVTTPIHLLFITV------VEEIPRFYQPHSLIVAETGASVNIIENY- 202
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G C Y+ N+V E+ + +V H+ +Q +S + HI T + Q
Sbjct: 203 GALAEYCSDLPVNYSYFTNAVTEIYLEANAEVIHTRVQRESGDGFHIGRTIIEQ 256
>gi|384245333|gb|EIE18827.1| stabilizer of iron transporter SufD [Coccomyxa subellipsoidea
C-169]
Length = 518
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+A +L S+++ P P++++R + L S P+ ++E +RFTD + I Q++
Sbjct: 96 IARTLAAFRKDSANAQTLPGPMEEMRMDCTVALRSQRMPTTRNEEYRFTDIAPIL--QLE 153
Query: 112 P------ITRPSSSLDVSTDAQ-----FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
P P ++ +A +V+IDG + + LP
Sbjct: 154 PQVAASATVLPGEAIAALVEASPLKEAVARVVVIDGVVARQLSDTDRLPQ---------- 203
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
G R+ G F ING A D+ I VP G VE PI++ Y++ NV
Sbjct: 204 -QGKQARLR--------GSPFALINGATAEDVLCIDVPEGVSVEGPIHVLYITSGASNVV 254
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ PR++ + ++EEFVG +G + ++ N+V E+ + +++H Y+
Sbjct: 255 A-------PRLLCTLGADSSAEVVEEFVGPAKGAEPHFTNAVAEINLADRAQIKHGYVAL 307
Query: 280 QSLNAAHIKWTAVRQ 294
+ A H+K T VRQ
Sbjct: 308 EGRRALHMKGTLVRQ 322
>gi|113477761|ref|YP_723822.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
gi|110168809|gb|ABG53349.1| FeS assembly protein SufD [Trichodesmium erythraeum IMS101]
Length = 453
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 119/237 (50%), Gaps = 22/237 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVS----TDAQ 127
LQ++RD ++ + P++KDE +RFT+ +SM+K S P +L+++ +
Sbjct: 41 LQQVRDRAAAWVRELSIPTKKDEEWRFTNLSSMMKLSFQAPTLVDLDALNIAPFILPEVA 100
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSIN 185
LV ++G + + + V+VG+L + + KRV +++++ Q G ++F +N
Sbjct: 101 DSRLVFVNGVFAPQLSEVKGIENQVFVGNLGQLPEEYQKRVGNYLAQ-QPGSEEVFTCLN 159
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG-II 244
G D V+++P +E PI+L +++ E ++PI R ++V E G II
Sbjct: 160 TAGLTDAAVVWLPKNQVLEKPIHLLFIATE------TEIPILTQRRCLVVAESNSSGKII 213
Query: 245 EEFVGKE-------GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E V E + Y N+V E+ + + ++ H+ +Q + A HI TA+ Q
Sbjct: 214 EHCVTAEVICPEAPNSHPYLTNTVTEIWVEENAEIDHTRVQRDAGAAFHIGKTAIAQ 270
>gi|54293586|ref|YP_126001.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
gi|53753418|emb|CAH14871.1| hypothetical protein lpl0638 [Legionella pneumophila str. Lens]
Length = 428
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPEGVLILPLSLALINYAD-LVKPYLGKIVEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 189 LIEEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|378776542|ref|YP_005184979.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|364507356|gb|AEW50880.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 428
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSSSLDVSTDAQFP 129
L +L+ + L +P+R DE +++T + P +P+ V D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKA-VFYDSPVK 80
Query: 130 SLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+L LI +GFI + NLP+GV + +L+ +D ++K I E + G F +
Sbjct: 81 NLFLIQNGFISQEQEWIKNLPEGVLILPLSLALIHYAD-LVKPYLGKIVEQEHG--FHYL 137
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
N IY+PAG +E PI LK++ + R ++L+E+ + +I
Sbjct: 138 NTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQATLI 190
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ ++RQ
Sbjct: 191 EEYQGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSIRQ 239
>gi|374293753|ref|YP_005040776.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
gi|357427156|emb|CBS90094.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum lipoferum 4B]
Length = 445
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 12/227 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD----VSTDAQ- 127
L +LR + + + P+ ++E +R+T+ + QP ++++D V + Q
Sbjct: 35 LNELRAAGRERFAAVGLPTIRNESWRYTNLRDLAKVSFQPAAPAAATIDLLPTVRAEGQD 94
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSIN 185
P LV +DG + ++ LP GV + SL ++D I D ++N
Sbjct: 95 GPRLVFVDGRFRADLSSVDGLPPGVELLSLAAALTTHSDLLADHIGRLAAADDRPLVALN 154
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V++VPAG +VE PI L ++SV + +PR +++ E G + ++E
Sbjct: 155 SAYLADGAVLHVPAGVQVERPIELVFVSVG----TEAQATSCHPRSLLIAEAGSKAVVVE 210
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
VG+ G +N V EV +G+G + H Q + A H+ A
Sbjct: 211 HHVGR-GAGTTLSNHVTEVFVGEGATLHHYKSQREGGGAIHLSHIAA 256
>gi|397663169|ref|YP_006504707.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
gi|395126580|emb|CCD04763.1| component of SufBCD complex [Legionella pneumophila subsp.
pneumophila]
Length = 428
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 24/232 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVLPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP GV + +L+ +D + + + + F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGKIVEQEHG---FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+PAG +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPAGICLEEPIVLKHIQDQTNQA-------VYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|116626729|ref|YP_828885.1| iron ABC transporter permease [Candidatus Solibacter usitatus
Ellin6076]
gi|116229891|gb|ABJ88600.1| Iron-regulated ABC transporter permease protein SufD [Candidatus
Solibacter usitatus Ellin6076]
Length = 420
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR----PSSSLDVSTD 125
P LQ LRD++ + +P+ +E +RFT+ I PI R P + +V+T
Sbjct: 22 PAWLQPLRDNAFRRFAELGFPTIHNEEWRFTN--------IAPIARTKFAPGRTGEVATK 73
Query: 126 -AQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A+ P LV +G + LP G+ G I K + + S + + F +
Sbjct: 74 LAKGPIQLVFANGHLLTRP---ETLPAGLQAGGFADDPAAIEKHLGKYASFDE--NAFVA 128
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVG 242
+N D +I V G + PI L YL+ + PI ++PR ++L+ E +
Sbjct: 129 LNTAMTQDGALIRVARGAVIAEPIELFYLT------STAATPIATHPRALILIGENAQCS 182
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
I+E + G G Y+ N+V E+V+G+G V H +Q ++L A H+
Sbjct: 183 IVERYQGA-GEGAYFTNAVTEIVVGEGAVVDHYKVQQETLAAYHV 226
>gi|52840840|ref|YP_094639.1| ABC transporter permease [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296623|ref|YP_122992.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
gi|52627951|gb|AAU26692.1| ABC transporter, permease component [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750408|emb|CAH11802.1| hypothetical protein lpp0654 [Legionella pneumophila str. Paris]
Length = 428
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 24/232 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPS--SSLDVSTDAQ 127
L +L+ + L +P+R DE +++T + P +P+ ++ D D+
Sbjct: 22 LAQLQSKALTDLKRRGFPTRYDEEWKYTLVDSLLQQHFVPPDPTVKPALKTAFD---DSP 78
Query: 128 FPSLVLI-DGFIQNSALNLSNLPDGVYVG----SLLGVSDGIMKRVSDFISEFQCGDLFW 182
+L LI +GFI + NLP GV + +L+ +D + + I E + G F
Sbjct: 79 VKNLFLIQNGFISQEQEWIKNLPQGVLILPLSLALIHYADLVKPHLGK-IMEQEHG--FH 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N IY+P G +E PI LK++ + R ++L+E+ +
Sbjct: 136 YLNTAMLQCGVFIYIPEGICLEEPIVLKHIQDQTNQA-------MYLRHLILMEKESQAT 188
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IEE+ G+E N CY+ NS+ EV +G G K+ H +Q +S +A H+ +VRQ
Sbjct: 189 LIEEYHGEE-NICYFTNSITEVFLGAGAKLNHYKIQKESKSAYHLGHLSVRQ 239
>gi|288940481|ref|YP_003442721.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
gi|288895853|gb|ADC61689.1| FeS assembly protein SufD [Allochromatium vinosum DSM 180]
Length = 433
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 20/247 (8%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L LE L + S P P L + R ++ L + P P K E +R+T+ +
Sbjct: 5 LHSGLEHWLSAPDDS-PAPDWLLEHRRAARARLSTQPLPHSKQEAWRYTNLKGLLEQDFT 63
Query: 112 PITRPSSSL---DVST------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
I P S+L D+ T DA +VL++G L LP G +G L D
Sbjct: 64 AIEEPLSALQPEDLDTVLIPGFDAH--RVVLVNGRFAPELSTLGELPAGARIGGLRDWLD 121
Query: 163 GIMKRVSDFI--SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + + + + G F +N G D V+++ G +E P+ L +LSV +D
Sbjct: 122 HDPESLRGRLDAARGESGAFFALLNTAGLDDGLVVWLARGVILERPLELIHLSV---GLD 178
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ ++ PR +V +E G + ++E +V G Y N+V+EVV+ + ++H LQ +
Sbjct: 179 EPR--VAQPRHLVHLEAGAQATLVERYVSL-GESLYCTNAVMEVVLERDAVLKHERLQME 235
Query: 281 SLNAAHI 287
S NA H+
Sbjct: 236 SRNAFHL 242
>gi|302832968|ref|XP_002948048.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
gi|300266850|gb|EFJ51036.1| iron-sulfur cluster assembly protein [Volvox carteri f.
nagariensis]
Length = 492
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 23/254 (9%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--- 116
L + + P L LR++S+ L + P+ ++E +RFTD S + + ++P
Sbjct: 49 LARTVKDVATPPGLVTLREASTGALATLRMPTTRNEEYRFTDISPLLKTAVEPAAPGAVV 108
Query: 117 SSSLDVSTDA--QFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
+S L TD V++DG +++ L++LP GVYVG L G S +++++ +
Sbjct: 109 TSELLQRTDLPDAAVVAVVVDGVLRSELCRGLADLPKGVYVGPLEGASAAVVEKLGSLSN 168
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
G F +NG P + V+ G + P+++ L V + + + PR++V
Sbjct: 169 SR--GGPFAVLNGSLTPGVLVVAAEPGASLPGPVFV--LHVASASSAAAIANANAPRLLV 224
Query: 234 LVEEGGEVGIIEEFVGKE-------------GNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
G V ++EE+VG E + Y S+ E+ + +V+HSY+Q +
Sbjct: 225 HAGVGSLVEVVEEYVGLEDSTTASAAASASSDHGHYLTVSMAELFLEPAAEVKHSYVQRE 284
Query: 281 SLNAAHIKWTAVRQ 294
+ + H K T V Q
Sbjct: 285 AAGSFHFKGTLVHQ 298
>gi|288961956|ref|YP_003452266.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
gi|288914236|dbj|BAI75722.1| Fe-S cluster assembly protein [Azospirillum sp. B510]
Length = 454
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV--STDAQF-P 129
L +LR + + + P+ K+E +R+T+ + + ++S+D+ + A+ P
Sbjct: 46 LTELRAAGRERFAAVGLPTIKNESWRYTNLRDLAKTSFLSAAPAAASIDLLPTLRAEGGP 105
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGM 187
LV +DG + ++ LP GV + SL ++D I D ++N
Sbjct: 106 RLVFVDGRFRADLSSVGGLPPGVELLSLAAALTSHGDLLADHIGRLAVADDRPLVALNSA 165
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
D V++VPAG +VE P+ L ++SV + +PR +++ E G + ++E
Sbjct: 166 YLADGPVLHVPAGVQVERPVELVFVSVG----SEAQATACHPRSLLVAEAGSKAAVVEHH 221
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
VG+ G AN V EV +G+G + H Q + A H+ A
Sbjct: 222 VGR-GAGTTLANHVTEVFVGEGATLHHYKSQCEGGGAIHLSHIAA 265
>gi|209516301|ref|ZP_03265158.1| FeS assembly protein SufD [Burkholderia sp. H160]
gi|209503237|gb|EEA03236.1| FeS assembly protein SufD [Burkholderia sp. H160]
Length = 441
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 17/250 (6%)
Query: 54 ESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L + + SS+LP LP L++ R + +T + +P+ + E +++T+ + I
Sbjct: 7 DYLHQAFQTVSSTLPGAELPWLRRARHDAFETFEALGFPTTRLEDWKYTNVATIAKRPWH 66
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+ S DV D LV ++G + LPD +VGSL +
Sbjct: 67 FTSPRSDEPDVERIVDQLVPDTTVGRLVFMNGHHIPRLSRVPALPDAAFVGSLTRALREM 126
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+R+ I+ D F ++N D V+ +P C ++ P+ + +L+ E G L
Sbjct: 127 PERLMGVIAHQAPHDGFAALNTAFLSDGYVVLLPPDCAIDAPLVMLFLTDEAG------L 180
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ +P ++ + I+E+FVG + Y N+V +V G V+H +QN++ NA
Sbjct: 181 AV-HPFNTIVADARSRCSIVEQFVGI-ADGAYLINAVTRIVTGNEADVQHCRIQNEARNA 238
Query: 285 AHIKWTAVRQ 294
HI V Q
Sbjct: 239 FHIAHVDVTQ 248
>gi|192361506|ref|YP_001981956.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
gi|190687671|gb|ACE85349.1| FeS assembly protein SufD [Cellvibrio japonicus Ueda107]
Length = 434
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 21/228 (9%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK----SSQIQPITRPSSSLD-V 122
Q LP LQ+LR ++ L+ PWP+RK E +++T ++ S Q T ++SLD +
Sbjct: 16 QVLPWLQELRVQAADAWLAQPWPTRKTEHWKYTPLQSLQKDTPQSWGQGETLEAASLDLI 75
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--L 180
DA LV ++G NS L+ S+LP GV S + R ++ G+ L
Sbjct: 76 PLDA--TRLVFVNGVF-NSELS-SSLPAGVVRFSQANSEQQALVR--QYLGRVVEGERHL 129
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGG 239
F ++N + +++VP + E P+YL ++S ++ P S N RV+V++E G
Sbjct: 130 FATLNNAWVNEGVLVHVPRNIQWEKPVYLVHVS------SAQDAPTSANSRVLVVLESGA 183
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++E+++ + + N++ E+V+G + H L + NA HI
Sbjct: 184 SATLVEQYISTDEIQNSFVNALSELVLGDNASLHHYRLNLEQENALHI 231
>gi|385811470|ref|YP_005847866.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
gi|383803518|gb|AFH50598.1| Fe-S cluster assembly protein SufD [Ignavibacterium album JCM
16511]
Length = 437
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 23/255 (9%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I+ +S E SL + ++R + S P+ KDE +++T+ S I
Sbjct: 11 IENFQSFEKSLNGGKTE-----SFHRIRKDALSKFSSIKIPTIKDEEWKYTNISSIIKHN 65
Query: 110 IQPI-----TRPSSSLDVSTDA-QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ T P D + LV I+G + L+ LPD V VGSL
Sbjct: 66 FSVVPPKKDTAPEIIGKFLFDKLEHHLLVFINGEFRKDLSRLNELPDRVKVGSLSAAIKN 125
Query: 164 ----IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
++K + + +LF ++N D I VP G +E+PI++ +L++ G
Sbjct: 126 NHPVLLKHFGKYAED--SNNLFTALNSAFTKDGAFILVPKGIAIEDPIHIIFLNIAG--- 180
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+K + PR + + EE ++ IIE + + Y +N+V E+ + + V H LQ
Sbjct: 181 -EEKFA-TQPRNLFIAEENSQITIIEHYAS-DDEGIYLSNAVTEIFVCENAVVDHIKLQE 237
Query: 280 QSLNAAHIKWTAVRQ 294
+S A HI V Q
Sbjct: 238 ESTKAFHIGRMEVDQ 252
>gi|358637797|dbj|BAL25094.1| putative Fe-S assembly protein [Azoarcus sp. KH32C]
Length = 441
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 22/258 (8%)
Query: 44 FSDPFVIQLAESLEDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
F D FV E + LP +S +P +++LR + + P+ +DE +++T
Sbjct: 13 FVDRFVAAFVER-QSRLPGAS------VPWIRRLRSEAIERFAELGLPTTRDEDWKYTSV 65
Query: 103 SMIKSSQIQPITRPSSSLDVSTDAQFPSL------VLIDGFIQNSALNLSNLPDGVYVGS 156
+ I + +S V +L V +DG + + LP+G ++GS
Sbjct: 66 AGIARRAFDVVVADASLEGVGERVAAYALPGTHRLVFVDGHYVSGLSQVGALPEGAHIGS 125
Query: 157 LLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
L S R+++ D F ++N D I + G VE P++L +++
Sbjct: 126 LALASVAHADRLAEIFGGGNAADGFGALNEALWSDGAWIDLAPGVVVEEPVHLLFMT--- 182
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
++ S P +V V +G V +IE VG + Y ++V +V+GK +V H+
Sbjct: 183 ----TRSDGASFPHNLVHVGDGASVTMIEHHVGPD-EASYLTDAVTRIVVGKAARVNHTK 237
Query: 277 LQNQSLNAAHIKWTAVRQ 294
LQ + HI A Q
Sbjct: 238 LQQEGRKGFHIARVAAEQ 255
>gi|387129251|ref|YP_006292141.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
gi|386270540|gb|AFJ01454.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM7]
Length = 430
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 18/252 (7%)
Query: 51 QLAESLEDSLPSSSSSLPQPLP---LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
QL E D +P + LP + LR S Q P ++DE +++T
Sbjct: 3 QLTEFQTDFIPVAEMRRENGLPNPDWRGLRASGQQYFERNGLPGKRDEDWKYTSLWSFSQ 62
Query: 108 SQI-----QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
Q QP ++ + +DA LV++DG I +A +LS LPDGV V L D
Sbjct: 63 QQFTHDVSQPGHVNAADWQLLSDAY--QLVIVDGHIDFTASSLSGLPDGVTVQPLSQSLD 120
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
M ++ IS + G F ++N M + I+V AG K++ PI L L V GN
Sbjct: 121 AAMPYLNQQISLEKSG--FNALNTMLMSEGAYIHVAAGVKLKKPIEL--LVVNSGNTADL 176
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ + R VV++E E +IE + + + NS+ E+ + K+ H LQ +S
Sbjct: 177 AVHL---RHVVVMEAESEATLIELYASPD-DTTGLTNSITEIDLADRAKLFHYKLQRESK 232
Query: 283 NAAHIKWTAVRQ 294
HI A +Q
Sbjct: 233 QQFHIATMAAKQ 244
>gi|223936151|ref|ZP_03628065.1| FeS assembly protein SufD [bacterium Ellin514]
gi|223895373|gb|EEF61820.1| FeS assembly protein SufD [bacterium Ellin514]
Length = 449
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+S + + P L +R +S +P+ KDE +RFT+ I +P+
Sbjct: 12 DSFWEKFERLEKEIKNPSWLFPIRKASIARFAELGFPTLKDEDWRFTNVGPITKLPFKPV 71
Query: 114 -TRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
T SL+ + QF LV ++G ++ DG+ VGSL +
Sbjct: 72 FTYSKESLNEAAINQFAFTSLKSSKLVFVNGHFSKELSHILPQKDGIKVGSLAAALEADS 131
Query: 166 KRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ + + G F ++N D I+VPAG +E P++L + V + K
Sbjct: 132 ALLEKHLGRYVKPEGTAFSALNTAFFHDGAFIHVPAGKVIEEPVHLLF-------VTTSK 184
Query: 224 LPIS--NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
P + +PR +++ E G + +IE +V + Y+ N V E+VIG+ V H Q++S
Sbjct: 185 EPGTTVHPRNLIIAERGSQATVIESYVSTV-DGPYFTNVVSEMVIGEDAVVEHCKFQDES 243
Query: 282 LNAAHI 287
A HI
Sbjct: 244 PEAFHI 249
>gi|56752363|ref|YP_173064.1| hypothetical protein syc2354_c [Synechococcus elongatus PCC 6301]
gi|56687322|dbj|BAD80544.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 442
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 22/227 (9%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFP-S 130
+ L+ + L PS K E +RFTD S++ +S P + ++ A P
Sbjct: 40 ESLQAQARDRLTDLAIPSTKVEDWRFTDLSLLPKRSFVAAPAQAKAEFVEPLLLADVPLR 99
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
V +DG + + L+ ++ P+G+ + +G I + DLF ++N G
Sbjct: 100 AVFVDGQFR-ADLSSADWPEGLSL--TVGFDAAIAQ-------NLLADDLFATLNTAGFG 149
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
VI V AG + P++L ++S + + S PR ++ + + +IE+F
Sbjct: 150 QAAVIRVAAGAAIAQPLHLLWISSS-----TSETAFSQPRALIELGANSALTLIEDF-AP 203
Query: 251 EGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
GNDC Y+ N+V E+ +G +++HS +Q A HI TAVRQ
Sbjct: 204 LGNDCTADYFVNAVTEIQLGANAQLKHSRVQRDGDRAIHIGTTAVRQ 250
>gi|81300546|ref|YP_400754.1| iron ABC transporter permease [Synechococcus elongatus PCC 7942]
gi|81169427|gb|ABB57767.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
elongatus PCC 7942]
Length = 442
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 22/227 (9%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFP-S 130
+ L+ + L PS K E +RFTD S++ +S P + ++ A P
Sbjct: 40 ESLQAQARDRLTDLAIPSTKVEDWRFTDLSLLLKRSFVAAPAQAKAEFVEPLLLADVPLR 99
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
V +DG + + L+ ++ P+G+ + +G I + DLF ++N G
Sbjct: 100 AVFVDGQFR-ADLSSADWPEGLSL--TVGFDAAIAQ-------NLLADDLFATLNTAGFG 149
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
VI V AG + P++L ++S + + S PR ++ + + +IE+F
Sbjct: 150 QAAVIRVAAGAAIAQPLHLLWISSS-----TSETAFSQPRALIELGANSALTLIEDF-AP 203
Query: 251 EGNDC---YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
GNDC Y+ N+V E+ +G +++HS +Q A HI TAVRQ
Sbjct: 204 LGNDCTADYFVNAVTEIQLGANAQLKHSRVQRDGDRAIHIGTTAVRQ 250
>gi|282897159|ref|ZP_06305161.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
gi|281197811|gb|EFA72705.1| FeS assembly protein SufD [Raphidiopsis brookii D9]
Length = 460
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 53/279 (18%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L PS +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNGICPS-----KEPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 K-----------SSQI------QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNL 148
+ SSQI + + P ++ LV I+G + + S+L
Sbjct: 75 REINFALGSNLGSSQIAMESLMEGLALPEAT---------HRLVFINGVLTPTLSQTSDL 125
Query: 149 PDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
P G++VG+L + D + ++ ++++F D+F +N G D+ V++ VE+ I
Sbjct: 126 PSGLHVGNLDSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVLWAGKNVVVEDSI 182
Query: 208 YLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFV-----------GKEGNDC 255
+L ++S+ G + P PR +V+ E ++ ++EE++ G +
Sbjct: 183 HLLFISLVG------EFPTFCQPRCLVIAEGNSQISLVEEYIILNTPSLQNNPMGAGLNT 236
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ NSV E+ + + +V HS + ++ I TAV Q
Sbjct: 237 GFNNSVTEIWVHENAQVNHSRIVLGGDHSFDIGKTAVTQ 275
>gi|390575630|ref|ZP_10255717.1| FeS assembly protein SufD [Burkholderia terrae BS001]
gi|389932429|gb|EIM94470.1| FeS assembly protein SufD [Burkholderia terrae BS001]
Length = 447
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 28/260 (10%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
GSL + +R+ I+ D F +++ D + +P G ++ P+++ +L+
Sbjct: 123 GSLARALREMPQRLQGTIAAQTYADGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
EGG L + VV+ G V I+E FVG G D YW N+V +V + V+H
Sbjct: 183 EGG------LAVQPFNVVLAGARSGCV-IVEHFVGL-GGDAYWTNAVTRIVADEQADVQH 234
Query: 275 SYLQNQSLNAAHIKWTAVRQ 294
LQ + A HI A Q
Sbjct: 235 YRLQQEGSKAFHIASVAAAQ 254
>gi|420251173|ref|ZP_14754360.1| FeS assembly protein SufD [Burkholderia sp. BT03]
gi|398058522|gb|EJL50415.1| FeS assembly protein SufD [Burkholderia sp. BT03]
Length = 447
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 28/260 (10%)
Query: 54 ESLEDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
ESL D + + L + LP L+ +R S+ + P+ + E +++T+ S+I
Sbjct: 4 ESL-DHFHEAFAQLAKRLPGAELPWLRAVRRSAFDQFNALGLPTTRHEDWKYTNVSVIGK 62
Query: 108 SQIQPITRPSSSL-------------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV 154
++ + L +++ D LV ++G ++ LP GV+V
Sbjct: 63 RPWHFASQRTDRLGLIDGSDVQGIVDELALDPAGHRLVFVNGLHAPRLSKVNGLPHGVFV 122
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
GSL + +R+ I+ D F +++ D + +P G ++ P+++ +L+
Sbjct: 123 GSLARALREMPQRLQGTIAARTYTDGFTALSTAFLTDGFAVVLPPGEVIDQPLHMLFLTD 182
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
EGG L + VV+ G V I+E FVG G D YW N+V +V + V+H
Sbjct: 183 EGG------LAVQPFNVVLAGARSGCV-IVEHFVGL-GGDAYWTNAVTRIVADEQADVQH 234
Query: 275 SYLQNQSLNAAHIKWTAVRQ 294
LQ + A HI A Q
Sbjct: 235 YRLQQEGSKAFHIASVAAAQ 254
>gi|414167004|ref|ZP_11423234.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
gi|410892282|gb|EKS40077.1| FeS assembly protein SufD [Afipia clevelandensis ATCC 49720]
Length = 440
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 50 IQLAESLEDSL----PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+L ++ S LP P+ ++R ++ + P R+ E +++TD +
Sbjct: 3 VALVQSTTDALGELFAAARSRLPGSGPVAEVRQNAFDDFVRRGLPHRRIEEWKYTDLRAL 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
++ P+ D++ A+ LVL+DG +++ L GV++ +
Sbjct: 63 LR-EVAPLAAAPDQADLTRAAKAIKALGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRT 121
Query: 157 LLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L V DG K +D + D S+N A D V+ V G + PI++ +++ +
Sbjct: 122 LREVLEDGGNKVRADLLQTSVASDAMISLNAALATDGVVVDVAEGVTLTKPIHIVHVATD 181
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G R ++ + +G + ++E FV EG Y + + + IG +++H
Sbjct: 182 SGTS-------LVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHV 234
Query: 276 YLQNQSLNAAHI 287
L +L+AAH+
Sbjct: 235 RLMEDALDAAHV 246
>gi|392377260|ref|YP_004984419.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
gi|356878741|emb|CCC99631.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Azospirillum brasilense Sp245]
Length = 451
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 28/262 (10%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
+ PF+ Q + ++D LP + S L LR + P+ K+E +R+T+
Sbjct: 18 AKPFLEQF-DRVKDGLPGAGLSW-----LNDLRSQGHHRFAALGLPTVKNESWRYTNLRA 71
Query: 105 IKSSQIQPITRPSSSL------DVSTDAQF-PSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
+ QP ++ V TD P LV +DG + + + LP GV L
Sbjct: 72 LDKLAFQPAAGTGDTVRFDVLPTVRTDGTTGPRLVFVDGRFRAELSSTAGLPAGV---EL 128
Query: 158 LGVSDGIMKR---VSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
L ++D + ++ V++ + D ++N D V++VP G VE I L ++
Sbjct: 129 LNLADALARKPDLVAEHLGRIAAPDDQPLVALNTAFLADGPVLHVPRGVTVEETIELVFV 188
Query: 213 SVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGK 271
SV S+ P + +PR +++ E I+E VG G+ +N V EV +G+G
Sbjct: 189 SV-----GSEAQPTAFHPRGLIVAEAESRAVIVEHHVGL-GSCTTLSNGVTEVFVGEGAL 242
Query: 272 VRHSYLQNQSLNAAHIKWTAVR 293
V H +Q + + H+ TA +
Sbjct: 243 VHHYKVQREHAESFHLSHTAAK 264
>gi|153003773|ref|YP_001378098.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
gi|152027346|gb|ABS25114.1| FeS assembly protein SufD [Anaeromyxobacter sp. Fw109-5]
Length = 437
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 18/255 (7%)
Query: 56 LEDSLPSSSSSLP-QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-----MIKSSQ 109
LE SL + P +P L + R + + P+ +DE +RFT + +++ +
Sbjct: 4 LESSLVDLYAKDPREPGWLSEARAEALARFRARGLPTSRDEDWRFTSLAPLAPLVLERAH 63
Query: 110 IQPITRPSSSLDV--STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
+ +++ + + A+ LV +DG ++ + LP GV V L +
Sbjct: 64 VADADGGAAAALLDRAPGAEGTRLVFLDGRLRPELSRVGALPGGVVVCPLSRALREAPEL 123
Query: 168 VSDFISEFQC-GD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
V + GD F + N D G +++ AG ++ P+ L +L+ S +
Sbjct: 124 VRPHLGRLAPPGDHAFVAANAALMADGGFVHLAAGAALDAPVVLVFLA------SSHRPA 177
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+++PR +V+ EG + E F+G EG Y N+V E+V+G+G +V H LQ++S A
Sbjct: 178 LASPRTLVVAGEGARATVAEVFLGTEG--VYLTNAVTELVLGEGAEVEHLRLQDESRRAF 235
Query: 286 HIKWTAVRQLVVMSL 300
H+ A Q SL
Sbjct: 236 HVGVVAAEQQARASL 250
>gi|284929291|ref|YP_003421813.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
gi|284809735|gb|ADB95432.1| Iron-regulated ABC transporter permease protein SufD
[cyanobacterium UCYN-A]
Length = 443
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 18/235 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-----PITRPSSSLDVSTDAQ 127
Q L+ S Q + +P+ K+E +RF + + + Q + IT+ S V ++A
Sbjct: 30 FQSLKQDSLQKIKELSFPTSKEEEWRFMNLAELYKYQFKIAKATKITKESIKDLVVSEAN 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSING 186
+V +DG + +++ D +++G+L V D + ++ Q D+F +N
Sbjct: 90 SNCIVFVDGQYDRALSDIALSSDDIFIGTLQDVPDIKKNEIYTLLNSDQNKKDIFSRLNT 149
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
+G D +I V +++PI L +++ + N L I PR +V+ E+G ++ I+E
Sbjct: 150 IGLVDPAIIIVNENITIKDPIQLLFIATKQKN----SLLIQ-PRTLVVAEKGSDLSIVEY 204
Query: 247 FVGKEGNDC-------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ E Y+ NSV E+ + +V HS +Q +S + HI + + Q
Sbjct: 205 YSTVENPYLELDQIVPYFTNSVTEIFLKDNSRVIHSRIQLESNISFHISKSNITQ 259
>gi|30249419|ref|NP_841489.1| hypothetical protein NE1448 [Nitrosomonas europaea ATCC 19718]
gi|30138782|emb|CAD85359.1| Uncharacterized protein family UPF0051 [Nitrosomonas europaea ATCC
19718]
Length = 435
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 30/248 (12%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
E L +S +S + L +LR+ + + S P+ +DE +RFTD S ++S P
Sbjct: 11 EKLIESWKKEASPVHSVSYLDQLREDALDRIESLRLPTIRDEEWRFTDISSLRS---MPF 67
Query: 114 TRPSSS----LDVST----DAQFPSLVLIDGFIQNSALNLSNLPDG-----VYVGSLLGV 160
R S++ LD D LV +DG + LS+L D + L+G
Sbjct: 68 PRASAAPLPGLDKQAGTFLDETACRLVFVDGQYMS---GLSSLADDGSITVCSLSELIGT 124
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
I +R +++FQ ++F ++N D I +PAG V+ P+++ Y V
Sbjct: 125 RASIAERYFGQLADFQ-ENVFVALNTALMHDGVCIVIPAGVSVKVPVHILY-------VT 176
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S+K PR +++ E G V ++EE+V EG N+V E+ I V H +Q
Sbjct: 177 SRKDVAVYPRCLLIAEPGANVTVVEEYVTLYEGAS--LTNAVTEMYIRDSACVNHIRVQR 234
Query: 280 QSLNAAHI 287
+S A HI
Sbjct: 235 ESSQAFHI 242
>gi|254422828|ref|ZP_05036546.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
gi|196190317|gb|EDX85281.1| FeS assembly protein SufD [Synechococcus sp. PCC 7335]
Length = 462
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 44/264 (16%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP----- 116
+++++ PL L+ LRD + + +PS KDE +RFTD S + QP R
Sbjct: 28 AAAAADESPLGLKALRDQAIALVNERSFPSGKDEEWRFTDLSKMLD---QPFQRSQPVYS 84
Query: 117 -----SSSLDVSTDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVG---SLLGVSDGIMKR 167
++ L + +D L I+G +S + + D VG LL SD K
Sbjct: 85 QADDWNAHLKLLSDG--TCLTTINGHYDSSLSREVDQSTDKAIVGPLSELLKNSDYAEKL 142
Query: 168 ---VSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ D +++ + G ++F ++N +G D+ V++V A V+ PIY+ S +GG
Sbjct: 143 GPILKDKLAQIKGGSEVFTALNTVGFADVMVVWVQADQVVDAPIYIARGS-QGG------ 195
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVG-------------KEGNDCYWANSVLEVVIGKGG 270
IS+ R +V+ E + ++E F G E + NSV E+ + +G
Sbjct: 196 -FISHVRSLVIAERHAKFTLVESFFGPAEATNAQCSVGQDEPTETCCNNSVTEIWLAEGA 254
Query: 271 KVRHSYLQNQSLNAAHIKWTAVRQ 294
+V H +Q++S N H+ TAV Q
Sbjct: 255 QVNHIRVQDESANTFHLAKTAVDQ 278
>gi|452823290|gb|EME30302.1| ABC transporter, Fe-S cluster assembly protein SufD, transmembrane
[Galdieria sulphuraria]
Length = 540
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPIT-RPSSSLDVS---TDAQFPSLVLIDGFIQNSALNL 145
P RKDE +RFT+ + ++ Q + R + L S D Q +VL+DG N+
Sbjct: 126 PGRKDELWRFTNLRNLFLTRFQTSSHRVDNQLLESLFEKDVQSQRVVLVDGVFDPFLSNI 185
Query: 146 SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----DLFWSINGMGAPDLGVIYVPAGC 201
SN+PD +++GS+ + + + + + + G ++F +IN D+ ++++P
Sbjct: 186 SNIPDRIFIGSVTELDVERQRWIYELTKKGETGIQETNIFGAINLASFRDITIVWIPQDV 245
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
+++ I+L S ++S IS+PR+VV+VE G V I++ G G Y N
Sbjct: 246 SLQDYIHLCCYS--SNCLNSSFYGISHPRIVVVVEGGSHVKILQHHFGASGG--YLDNFA 301
Query: 262 LEVVIGKGGKVRHSYLQNQ 280
+ IG + + Y+ N+
Sbjct: 302 TSISIGDSATLEY-YIVNE 319
>gi|407716313|ref|YP_006837593.1| iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
gi|407256649|gb|AFT67090.1| Iron-regulated ABC transporter permease protein SufD
[Cycloclasticus sp. P1]
Length = 443
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 26/228 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L LR +++ ++ +P+ ++E +R+T+ + I+ +Q T P + V D+ F
Sbjct: 30 LANLRKQAAEQFSASGFPTFREEEWRYTNITPIEKNQF---TLPDVAGQV--DSAFVDSV 84
Query: 129 -----PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEF-QCGD 179
+V +DGF Q +L ++P+GV V +L L ++ ++K + D + E G
Sbjct: 85 LLDDCHHIVFVDGFYQAELSSLKDIPNGVIVSALSDGLVDNEALIKSLLDSVVETPALG- 143
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
F + N D +I + V+ PI + ++S + G L +SN R ++L +
Sbjct: 144 -FINFNTALFSDGALICIEENTVVDKPIQVAFISSKQG-----ALTLSNTRNLILAQASS 197
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ IIE + + + CY N V EVV+ + H LQ++S +A HI
Sbjct: 198 KAQIIETYHAVD-DSCYLTNVVSEVVVEPNANLSHHRLQSESTSAYHI 244
>gi|282900437|ref|ZP_06308387.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
gi|281194750|gb|EFA69697.1| FeS assembly protein SufD [Cylindrospermopsis raciborskii CS-505]
Length = 461
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 129/271 (47%), Gaps = 36/271 (13%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ +L L + S +P L+++R ++++ + + P+ +DE +RFTD S +
Sbjct: 20 DAFLTRLLNQLNEICLSK-----EPSWLEQVRTNATKWVRHSVIPTTRDEEWRFTDLSPL 74
Query: 106 KSSQIQPITRPSSS---LDVSTDAQ---FPS----LVLIDGFIQNSALNLSNLPDGVYVG 155
+ + SS ++ D + P LV I+G + + S+LP G++VG
Sbjct: 75 REISFALGSNLGSSQIAMESFMDMEGLGLPEATHRLVFINGVLTPTLSQTSDLPSGLHVG 134
Query: 156 SLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+L + D + ++ ++++F D+F +N G D+ V++ VE+PI L ++S+
Sbjct: 135 NLNSLEDSVAQK---YLAQFDGTRDVFSDLNTAGLSDVAVVWARKNVVVEDPIQLLFISL 191
Query: 215 EGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVGKE----------GNDCYWANSVLE 263
G + P PR +V+ E ++ +IEE + G + + NSV E
Sbjct: 192 VG------EFPTFCQPRCLVIAEGNSQISLIEEHITLNTPSPQNNPSPGLNSGFNNSVTE 245
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + + ++ HS + ++ I TAV Q
Sbjct: 246 IWVHENAQINHSRIVLGGDHSFDIGKTAVTQ 276
>gi|424775418|ref|ZP_18202411.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
gi|422889128|gb|EKU31508.1| hypothetical protein C660_01565 [Alcaligenes sp. HPC1271]
Length = 435
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 14/227 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-----DAQ 127
L +R + WP+ + E + T ++++ P S++ V++ D
Sbjct: 25 LSAVRQRALDRFAQEGWPTTRIEAWHHTSLALLEQQSFAPQKSASAAELVASVRQQEDGY 84
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGM 187
F LV +DG + +L+ LP GV + SL + + + G ++N
Sbjct: 85 F--LVFVDGHYDAALSHLNELPAGVRLASLSTCLEQDADWLQQAYGDESLGASTAALNLA 142
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
A D +++ AG +E P++L ++ +GG+ S R ++ +E G ++E +
Sbjct: 143 LAQDGAALHIAAGKHLEQPVHLVFVRTQGGSA-------SFTRNLISLESGASATVVEHY 195
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
VG+EG D +++V + + + H LQ ++L H+ V+Q
Sbjct: 196 VGQEGTDASLSSAVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQ 242
>gi|197121305|ref|YP_002133256.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
gi|196171154|gb|ACG72127.1| FeS assembly protein SufD [Anaeromyxobacter sp. K]
Length = 439
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI------TRPSSSLDVSTDA-QFPSLVLIDGFIQNSA 142
P+ + E +RFT + + + + P P+ +L A + LV +G +
Sbjct: 39 PTPRHEDWRFTSLAALSTLSLAPAPAPEDGEGPARALLAGRPAPEGARLVFENGRFRREL 98
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAG 200
+ + LP G +GSL + V + D F ++NG D + +PAG
Sbjct: 99 SSGAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPAG 158
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
+VE PI L + + G + +PRV+V+ EG + E +G D Y ANS
Sbjct: 159 ARVEAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--GDTYLANS 211
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V E+V+G+G ++ H LQ++ A H+
Sbjct: 212 VTELVLGEGAEIEHLRLQDEGARAFHV 238
>gi|381160203|ref|ZP_09869435.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
gi|380878267|gb|EIC20359.1| FeS assembly protein SufD [Thiorhodovibrio sp. 970]
Length = 449
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVSTD 125
+P L +R ++++ + P+++ E +R+T + QP P ++L D+ D
Sbjct: 30 EPDWLTAMRAAATERASNQGVPTKRSEGWRYTSLRALIDQGFQPHQEPITALQPEDIE-D 88
Query: 126 AQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQ 176
P L V+++G + L LP GV +GSL V +D + + + Q
Sbjct: 89 QLIPGLDSHRLVMVNGHFEPRLSQLEGLPAGVRIGSLADVLAQDADALAGLLGQIAGDGQ 148
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLV 235
LF S+N G D V+ + A ++E P+ L +S+ +D + P ++ PR ++ +
Sbjct: 149 --HLFTSLNTAGFDDGLVMLIDAKVRLERPVELLNISI---GLDQAEGPGLAQPRHLIHL 203
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G + +IE + G+ Y N+V+E+ + + ++ H LQ +S +A H+ + Q
Sbjct: 204 AAGAQAELIERHL-SFGDALYCNNAVVEIRLAEQARLHHVRLQQESPSAYHLTGLYLEQ 261
>gi|226228435|ref|YP_002762541.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
gi|226091626|dbj|BAH40071.1| putative iron-sulfur cluster assembly protein SufD [Gemmatimonas
aurantiaca T-27]
Length = 438
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ--IQPITRPSSSL 120
++S P L+ LR + ++ S +P+ ++E + +T+ S I S+Q + +S++
Sbjct: 13 AASVADAPGSLKALRTAGAEAFKSLGFPTTREEDWHYTNVSAIASAQFDVAADRTAASAV 72
Query: 121 DVSTDAQF------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
DV+ A + P +V ++G + + LPDGV V L + + +S F+
Sbjct: 73 DVAALAPYTFGGTWPLIVFVNGRFSAALSSFGALPDGVRVMPLTQAAIDEPELLSRFLGT 132
Query: 175 FQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPRV 231
D F ++N A + ++++ + P++ L + G NV +S+PR
Sbjct: 133 AVTPSRDGFSALNAAFAGEGMLVHIAKEMVSDTPVHILHVVDAAGANV------MSHPRH 186
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
V++ E + ++E +VG + Y+ N+V+EV + G ++ +Q +S +A H+
Sbjct: 187 VLIAERHAKASVVESYVGL-ADVPYFTNAVVEVFVEDGATLQLVRIQRESRSAQHVGTVE 245
Query: 292 VRQ 294
RQ
Sbjct: 246 ARQ 248
>gi|338974695|ref|ZP_08630053.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
gi|338232290|gb|EGP07422.1| iron-sulfur cluster assembly protein SufD [Bradyrhizobiaceae
bacterium SG-6C]
Length = 440
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 22/252 (8%)
Query: 50 IQLAESLEDS----LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
+ L +S D+ ++ S LP P+ ++R ++ P R+ E +++TD +
Sbjct: 3 VALVQSTTDAPGELFAAARSRLPGSGPVAEVRQNAFDDFARRGLPHRRIEEWKYTDLRAL 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
++ P+ D++ A+ LVL+DG +++ L GV++ +
Sbjct: 63 LR-EVAPLAPAPDQADLTRAAKAIKSLGIENTQKLVLVDGVFTPQLSDVTTLEAGVHLRT 121
Query: 157 LLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L V DG K +D + D S+N A D V+ V G + PI++ ++S +
Sbjct: 122 LREVLEDGGNKVRADLLQTSVASDAMISLNAALATDGVVVDVAEGVTLTRPIHIVHVSTD 181
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G+ R ++ + +G + ++E FV EG Y + + + IG +++H
Sbjct: 182 SGSS-------LVTRSLLKLAKGAQATLVESFVAAEGAKSYQTHDSVVIWIGDEAELQHV 234
Query: 276 YLQNQSLNAAHI 287
L +L+AAH+
Sbjct: 235 RLMEDALDAAHV 246
>gi|224823958|ref|ZP_03697066.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
gi|224603377|gb|EEG09552.1| FeS assembly protein SufD [Pseudogulbenkiania ferrooxidans 2002]
Length = 438
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
P P+++ +D A LV ++G Q N+ LP GV + SL V +
Sbjct: 65 MPPP-PTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIDPLPGGVTLASLAEVLERD 123
Query: 165 MKRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+R+ + G F ++N D + + AG +E P++L +++ E G
Sbjct: 124 PQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAG----- 178
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
L + + R VV E G +IE V G+ Y +N+ ++V+G+ +V H LQ +SL
Sbjct: 179 -LAL-HTRNVVRAEAGSRACLIEHHVAL-GDGAYLSNTATDLVVGQDAEVEHLKLQQESL 235
Query: 283 NAAHIKWTAVRQ 294
A H+ V Q
Sbjct: 236 KAFHVAALDVDQ 247
>gi|82701831|ref|YP_411397.1| FeS assembly protein SufD [Nitrosospira multiformis ATCC 25196]
gi|82409896|gb|ABB74005.1| Iron-regulated ABC transporter permease protein SufD [Nitrosospira
multiformis ATCC 25196]
Length = 440
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 68 PQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
P PL +LR ++ P+ +DE +RFTD S + QP R + +L +
Sbjct: 24 PSPLAWFNQLRANAVDHAGRLKLPTTRDEEWRFTDLSPLVRHSFQP-ARAAPALQTADVE 82
Query: 127 QFP------SLVLIDG-----------FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
F LV +DG + N L ++NL + + + I +
Sbjct: 83 HFSLTEAAIRLVFVDGKYMPQLSTPAERLGNRGLIVTNLSSAITANA-----EAIEPHLG 137
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
+ + F+ G+LF ++N D ++ VP G ++ P+++ V ++ S+P
Sbjct: 138 QY-ARFE-GNLFAALNTAFLHDGALVIVPRGAVIDTPVHVLL-------VTTQPEVASHP 188
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
R + + E G EV I+E++V Y N+V E+ +G ++ H +Q S A HI
Sbjct: 189 RCLFIAEAGSEVTILEDYVSL-NEAIYVTNAVTEIAVGDNAQISHIRVQRDSTEAFHIGN 247
Query: 290 TAV 292
AV
Sbjct: 248 CAV 250
>gi|339483424|ref|YP_004695210.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
gi|338805569|gb|AEJ01811.1| FeS assembly protein SufD [Nitrosomonas sp. Is79A3]
Length = 436
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 33/237 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L +LR + + + P+R+DE +RFTD S + QP ++P +L F
Sbjct: 28 LNQLRTQAIDRVGTQKLPTRRDEEWRFTDISPLVHLPYQP-SQPECNLLAHDIEHFYLKE 86
Query: 129 --PSLVLIDGF-----------IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
LV +DG + +AL + NLP +V + V + + F +
Sbjct: 87 AKHRLVFVDGHYSPNLSTIIDPVDPAALVIGNLP--AFVATHASVLESHLGHYVHFDN-- 142
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+LF ++N D +I VP + PI+L +++ + S PR +++
Sbjct: 143 ---NLFAALNTAFLRDGALIIVPKNIAIAEPIHLLFIATQNE-------VTSYPRCLLIG 192
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
E G V +IE++V + Y NSV E+ + + +H +Q +S A H+ AV
Sbjct: 193 EAGSNVTLIEDYVALQ-QATYITNSVTEISLAANAQAKHIRIQRESTQAFHLANCAV 248
>gi|347539983|ref|YP_004847408.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
gi|345643161|dbj|BAK76994.1| FeS assembly protein SufD [Pseudogulbenkiania sp. NH8B]
Length = 438
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 53 AESLEDSLPSSSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
A+ D+ +++LP LP L++ R++ +P+ + E +++T + I+ S+
Sbjct: 5 ADFYRDAFARVATTLPGSELPWLRRGREAGLAFFAEAGFPTLRQEDWKYTSVAAIEKSRF 64
Query: 111 QPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
P P+++ +D A LV ++G Q N+ LP GV + SL V +
Sbjct: 65 MPPP-PTANGVAPGLIDAWGLAGTQRLVFVNGRYQPRWSNIGPLPAGVTLASLAEVLERD 123
Query: 165 MKRVSDFISEFQCG--DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+R+ + G F ++N D + + AG +E P++L +++ E G
Sbjct: 124 PQRLEGVLGVLPAGYPSGFAALNQAFFSDGVYLDLAAGVALETPVHLLFVTTEAG----- 178
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
L + + R VV E G +IE V G+ Y +N+ ++V+G+ ++ H LQ +SL
Sbjct: 179 -LAL-HTRNVVRAEAGSRACLIEHHVAL-GDGAYLSNTATDLVVGQDAEIEHLKLQQESL 235
Query: 283 NAAHIKWTAVRQ 294
A H+ V Q
Sbjct: 236 KAFHVAALDVDQ 247
>gi|86157272|ref|YP_464057.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773783|gb|ABC80620.1| Iron-regulated ABC transporter permease protein SufD
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 437
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI----TRPSSSLDVSTDA-QFPSLVLIDGFIQNSALN 144
P+ + E +RFT + + + + P P+ +L S A + LV +G +
Sbjct: 39 PTTRHEDWRFTSLAALSTLSLAPAPADGEGPARALLASRPAPEGARLVFENGRFRRELST 98
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCK 202
+ LP G +GSL + V + D F ++NG D + +P G +
Sbjct: 99 GAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGAR 158
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
V+ PI L + + G + +PRV+V+ EG + E +G D Y ANSV
Sbjct: 159 VDAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--GDTYLANSVT 211
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHI 287
E+V+G+G ++ H LQ++ A H+
Sbjct: 212 ELVLGEGAEIEHLRLQDEGARAFHV 236
>gi|344339048|ref|ZP_08769978.1| FeS assembly protein SufD [Thiocapsa marina 5811]
gi|343800968|gb|EGV18912.1| FeS assembly protein SufD [Thiocapsa marina 5811]
Length = 441
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 19/226 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF--PS 130
L+ R S+ + P K E +R+T + + ++L + + P
Sbjct: 28 LEAQRRSALHQVREQGVPGTKQEAWRYTSLKRLIEQGFARVEDEVTALQLHDIEELLIPG 87
Query: 131 L-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQCGDLF 181
L V+++G S L +LP GV V L + D + +R++ E Q LF
Sbjct: 88 LDSHRVVMVNGRYTPSLSALGDLPPGVRVTGLRALLASDPDALRERLNGVAGESQ--PLF 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N G D V+ + G +E PI L +LSV +D + ++ PR +V + +G +
Sbjct: 146 AALNTAGLDDGLVVLLDRGAVLERPIELIHLSV---GMDEPR--VAQPRHLVALADGAQA 200
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE +V G Y NSVLE+ +G+ ++H +Q +S NA HI
Sbjct: 201 SLIERYVSL-GESLYCTNSVLELSLGRDAVLKHDRIQIESPNAFHI 245
>gi|220916009|ref|YP_002491313.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953863|gb|ACL64247.1| FeS assembly protein SufD [Anaeromyxobacter dehalogenans 2CP-1]
Length = 437
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPI----TRPSSSLDVSTDA-QFPSLVLIDGFIQNSALN 144
P+ + E +RFT + + + + P P+ +L A + LV +G + +
Sbjct: 39 PTPRHEDWRFTSLAALSTLSLAPAPDDGEGPARALLAGRPAPEGARLVFENGRFRRELSS 98
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCK 202
+ LP G +GSL + V + D F ++NG D + +P G +
Sbjct: 99 GAPLPAGAVLGSLADALRHAPEAVRPHLGRLARVDGLAFTALNGALLEDGAFLLLPPGAR 158
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L + + G + +PRV+V+ EG + E +G +D Y ANSV
Sbjct: 159 VEAPIELVFATGAAGRAVA-----VHPRVLVVAGEGARATLAEVHLGT--SDTYLANSVT 211
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHI 287
E+V+G+G ++ H LQ++ A H+
Sbjct: 212 ELVLGEGAEIEHLRLQDEGARAFHV 236
>gi|86606834|ref|YP_475597.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
gi|86555376|gb|ABD00334.1| FeS assembly protein SufD [Synechococcus sp. JA-3-3Ab]
Length = 429
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+A + V ++G+ +LS LP + V L +++ ++ D+F ++
Sbjct: 90 EASYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAK-------TDVFTAL 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNPRVVVLVEEGGEVG 242
N D I + G +V +P++L +++V EG V ++ PR ++ ++ +
Sbjct: 143 NTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAV------LAQPRCLLSLQAHSSLT 196
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IE+ V G+ ++N+V E+ + +G ++ H LQ Q A HI TAVRQ
Sbjct: 197 LIEDHVSL-GSGIPFSNAVTEIALAEGSRLHHVILQRQGSPAFHINKTAVRQ 247
>gi|89900648|ref|YP_523119.1| FeS assembly protein SufD [Rhodoferax ferrireducens T118]
gi|89345385|gb|ABD69588.1| Iron-regulated ABC transporter permease protein SufD [Rhodoferax
ferrireducens T118]
Length = 442
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 22/250 (8%)
Query: 54 ESLEDSLPSSSSSL--PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+ L SL ++ SL QP L LR + + + + PS DE +RFT +
Sbjct: 15 DGLLASLTQTAGSLVSTQPKWLTTLRAQALERVGALTLPSTHDEAWRFTPLATFARQSFH 74
Query: 112 PITRPSSSL-----DVSTDAQFPSLVLIDGFIQNSALNLSNL-PD-GVYVGSLLGVSDGI 164
P+ P++ L + + LV +DG A LS+L PD G+ VG+L +
Sbjct: 75 PLRTPTALLPGDIKHLHIEEVTTRLVFVDGV---HAPQLSSLKPDAGLAVGTLASMLARQ 131
Query: 165 MKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + + LF ++N D V+ VP + P+++ Y+S +
Sbjct: 132 ASSIEPHLGQHLAFHDALFAALNTAFLQDAAVLVVPRETTLAAPVHVLYISTQPDVA--- 188
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S+PR++++ G + +IE++V Y+ N+V EV +G +V H +Q +S
Sbjct: 189 ----SHPRLLLVAGAGSKATLIEDYVALHPG-TYFTNAVAEVALGANAQVSHVRIQRESQ 243
Query: 283 NAAHIKWTAV 292
A H+ AV
Sbjct: 244 QAFHMASCAV 253
>gi|393758120|ref|ZP_10346944.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165812|gb|EJC65861.1| hypothetical protein QWA_03345 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 435
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-----DAQ 127
L +R + + WP+ + E + T ++++ P S++ V++ D
Sbjct: 25 LSAVRQRALERFEQEGWPTTRIEAWHHTSLALLEQQSFAPRKSASAAELVASVRQQEDGY 84
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWS 183
F LV +DG + +L LP GV + SL ++R +D++ + G +
Sbjct: 85 F--LVFVDGHYDAALSHLDELPAGVRLASL----SACLERDADWLQQAYGDESQGASTAA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A D +++ AG +E P++L ++ +GG+ S R ++ +E G +
Sbjct: 139 LNLALAQDGAALHIAAGKHLEQPVHLVFVRTQGGSA-------SFTRNLISLESGASATV 191
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+E +VG++G D ++ V + + + H LQ ++L H+ V+Q
Sbjct: 192 VEHYVGQDGMDASLSSVVTRLNVAPDANLTHMKLQQEALQDFHLAAIDVQQ 242
>gi|300113348|ref|YP_003759923.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
gi|299539285|gb|ADJ27602.1| FeS assembly protein SufD [Nitrosococcus watsonii C-113]
Length = 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 27/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
L++LR + +S +P K E +++T + + S ++ + ++
Sbjct: 30 LRELRQQALARFISLGFPGPKHEDWKYTRVRTLAETAFTSAVSSSIAVSLEQCQRYFLAE 89
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-------GIMKRVSDFISEFQCG 178
LV +DG +++LP G VG+L G++ +D+ ++
Sbjct: 90 TPCFRLVFVDGGFAPGLSEVADLPAGAVVGNLASCFKQQAESLRGVLASYADYQNQ---- 145
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N D +Y+P + P++L +L+ K +++PR ++++E
Sbjct: 146 -PFTALNTAFMADGAYLYLPPRTVLTKPVHLIFLTT-----GRSKAVVTHPRNLIVLEPE 199
Query: 239 GEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ +IE G ND Y+ N+V E+V+GKG V H LQ +S + HI V+Q
Sbjct: 200 SELTVIEHHAGL--NDAVYFTNTVTEIVVGKGASVEHIKLQEESAKSFHIATVQVQQ 254
>gi|383453126|ref|YP_005367115.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
gi|380734435|gb|AFE10437.1| FeS assembly protein SufD [Corallococcus coralloides DSM 2259]
Length = 436
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 31/238 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
LQ LR+ + P+ KDE +++T + + S QP+ S+ DV+
Sbjct: 23 LQALREEGLSQFQARGLPTSKDEEWKYTPVATLSSHPFQPVRDVSAGEDVAQAVARLALP 82
Query: 129 -PSLVLIDGFIQNSALNLSNLPDGVYV----------GSLLGVSDGIMKRVSDFISEFQC 177
P LV +DG + L+ LP GV + G+LL + G R S
Sbjct: 83 GPRLVFVDGRFVPALSVLAGLPRGVVLKPLSQALREDGALLQETLGQRARPS-------- 134
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG-GNVDSKKLPISNPRVVVLVE 236
F S+N + ++ + E P+ L +L+ G G V +++PR+VV+
Sbjct: 135 AHAFTSLNAALLEEGALLTLAPRALSEVPVQLLFLARGGDGPV------LASPRIVVVAG 188
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EG E ++E + G G+ + N+V EV +G +RH LQ + A H+ RQ
Sbjct: 189 EGSEATLVETYAGL-GSGATFTNAVTEVSLGDNASLRHFKLQAEGDTALHLGGLYSRQ 245
>gi|427428786|ref|ZP_18918825.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
gi|425881449|gb|EKV30136.1| Iron-sulfur cluster assembly protein SufD [Caenispirillum salinarum
AK4]
Length = 450
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 23/253 (9%)
Query: 55 SLEDSLPSSSSSLP--QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
+L D+LP + S+LP Q ++ R+ ++ + P+ K E +++T+ + +P
Sbjct: 11 ALSDTLPGAGSALPGGQIAWVRHAREEGAKLWQAHGAPTVKVEQWKYTNLREMLKVPFRP 70
Query: 113 ITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
RP+ + + T DA LV ++G +L LP GV V +L + +
Sbjct: 71 -ARPAHEIGLETIPAGDALTLDAHV--LVFVNGHFSAEMSDLDTLPKGVAVSTLATLLET 127
Query: 164 IMKRVSDFISEF-QCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
V FI DL F ++N D V+ V G +E P+++ +S +
Sbjct: 128 EPHAVEPFIGRLADAADLPFAALNQGALEDGFVVRVKTGTALEKPLHIVQVSA------A 181
Query: 222 KKLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ P ++ PR VV++E G ++E ++G + N+V E+ + + + H LQN
Sbjct: 182 EDEPTAHQPRNVVVLENGAVATVLESWIGTTSDTPSLRNAVTEIHVAQDAVLTHQILQNL 241
Query: 281 SLNAAHIKWTAVR 293
A ++ TAV+
Sbjct: 242 PERAYNVAATAVK 254
>gi|339322817|ref|YP_004681711.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
gi|338169425|gb|AEI80479.1| iron sulfur cluster assembly protein SufD [Cupriavidus necator N-1]
Length = 447
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL 131
L R + + +P+ + E +++T + ++ S+ + + LD + AQ +L
Sbjct: 28 LAHARRQALEYFAQAGFPTLRQEDWKYTSVAALERSRFAVALPQGGDGLDGAVAAQIEAL 87
Query: 132 --------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEF 175
V ++G Q + LP G + SL + +++R S++ S F
Sbjct: 88 ALAGAHLMVFVNGVHQPQWSRIGALPAGTELASLAATLERAPDCLEALLVRRTSEYPSGF 147
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
G F ++N D I V AG E PI+L +L+ G +L ++ R +V+
Sbjct: 148 ASG--FAALNMALMTDGAYIRVAAGTVPEQPIHLLFLATAG------ELA-THARNLVVA 198
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ G +V I+E G +G Y N++ ++V + +V H LQ +SL A HI
Sbjct: 199 QAGSQVCIVEHHAGLDGL-AYCTNTITDIVAERDAQVEHHKLQQESLKAFHI 249
>gi|414173284|ref|ZP_11428047.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
gi|410891936|gb|EKS39732.1| FeS assembly protein SufD [Afipia broomeae ATCC 49717]
Length = 441
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 18/244 (7%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
+L + ++ LP P+ + R ++ P R+ E +++TD + +I P+
Sbjct: 12 HALGELFAAARGRLPGSGPVAEFRQNAFDDFARLGLPHRRIEEWKYTDLRALLR-EIAPL 70
Query: 114 TRPSSSLDVSTDAQF---------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDG 163
D++ A+ LVL+DG +++ L GV++ +L V DG
Sbjct: 71 APAPDQADLARAAKAVKSLGIDSTQKLVLVDGVFAPQLSDVTALEAGVHLRTLREVLEDG 130
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
K +D + D S+N A D VI V G + PI++ +++ + G
Sbjct: 131 SNKVRADLLQTSVASDAMISLNAALATDGVVIDVAEGAALAKPIHIVHVATDSGTS---- 186
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
R ++ V +G V +E FV EG Y + + + IG +++H L +L+
Sbjct: 187 ---LVTRSLLKVGKGARVTFVESFVAAEGAKSYQTHDSVVIWIGDEAELQHVRLMEDALD 243
Query: 284 AAHI 287
AA+I
Sbjct: 244 AANI 247
>gi|108803021|ref|YP_642958.1| Iron-regulated ABC transporter permease SufD [Rubrobacter
xylanophilus DSM 9941]
gi|108764264|gb|ABG03146.1| Iron-regulated ABC transporter permease protein SufD [Rubrobacter
xylanophilus DSM 9941]
Length = 453
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 30/237 (12%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P L++ R ++ +T P P+ +DE +R+TD S ++ + P + S DV +
Sbjct: 29 EPGWLREKRLAAWRTFEEIPMPTMRDEAWRYTDVSDVRFEEYVPY---APSPDVEREGDL 85
Query: 129 PSLV--LIDGFIQNSALNLSNLPDGVYV---------GSLLGVSDGIMKRVSDFISEF-- 175
P V LI +NSAL + + + Y G + ++ + + E
Sbjct: 86 PDAVQRLIKEGEENSALLVQHNSETTYARTDEALRARGVIFTDLHTALREHGELVRERLF 145
Query: 176 ----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPR 230
+ D F +++ +YVP G +VE PI ++L V G + PR
Sbjct: 146 RLVPEGYDKFAALSAAAFSGGSFLYVPRGVEVEVPIQSYRWLDVAGSIM---------PR 196
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+V+VEEG V I+E+ ++G + +N +E+ +G+G +++ LQN + N H
Sbjct: 197 TLVIVEEGASVTYIDEYASEDGEEPALSNGAVELFVGQGAHLQYVSLQNWARNVVHF 253
>gi|154706072|ref|YP_001424793.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164685980|ref|ZP_01947350.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165924043|ref|ZP_02219875.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212218764|ref|YP_002305551.1| SufD [Coxiella burnetii CbuK_Q154]
gi|154355358|gb|ABS76820.1| SufD [Coxiella burnetii Dugway 5J108-111]
gi|164601505|gb|EAX32026.2| FeS assembly protein SufD [Coxiella burnetii 'MSU Goat Q177']
gi|165916502|gb|EDR35106.1| FeS assembly protein SufD [Coxiella burnetii Q321]
gi|212013026|gb|ACJ20406.1| SufD [Coxiella burnetii CbuK_Q154]
Length = 426
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 28/246 (11%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TDA LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDADIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQ 294
T++ Q
Sbjct: 226 NTSIHQ 231
>gi|86608871|ref|YP_477633.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557413|gb|ABD02370.1| FeS assembly protein SufD [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 430
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST------- 124
P LR + L P+ ++E ++++D S + + + + SLD +T
Sbjct: 30 PYTTLRQQARAQLAELGIPTPREEDWKYSDLSPLLAHKFRLAAAGDPSLDAATLEPWLWP 89
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
+ + V ++G+ +LS LP + V L +++ ++ D+F ++
Sbjct: 90 ETSYSRAVFVNGYFAPQLSDLSGLPTALQVIPLAQAPGELLQTLAK-------TDVFTAL 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPISNPRVVVLVEEGGEVG 242
N D I + G +V +P++L +++V EG V ++ PR ++ ++ +
Sbjct: 143 NTAHLGDGIQIGLQPGQEVPSPLHLLFITVAPEGEAV------LAQPRCLLSLQAHSSLT 196
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+IE+ V G+ + N+V E+ + +G ++ H LQ Q A HI TAVRQ
Sbjct: 197 LIEDHVSL-GSGIPFGNAVTEIALAEGSRLHHVILQRQGSPAFHINQTAVRQ 247
>gi|77165946|ref|YP_344471.1| FeS assembly protein SufD [Nitrosococcus oceani ATCC 19707]
gi|254433093|ref|ZP_05046601.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
gi|76884260|gb|ABA58941.1| Iron-regulated ABC transporter permease protein SufD [Nitrosococcus
oceani ATCC 19707]
gi|207089426|gb|EDZ66697.1| FeS assembly protein SufD [Nitrosococcus oceani AFC27]
Length = 446
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 27/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
L++LR + +S +P K+E +++T + + S ++ + ++
Sbjct: 30 LRELRQQALARFISLGFPGLKNEDWKYTRVRALAETAFNSAVSSSVAVSLEQCQRYFLAE 89
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD-------GIMKRVSDFISEFQCG 178
LV +DG + +LP G VG+L G G++ +D+ ++
Sbjct: 90 TPCFRLVFVDGCFAPGLSEIEDLPAGTVVGNLAGCFKQQGESLRGVLASYADYQNQ---- 145
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N D +Y+P + P++L +L+ + +++ R ++++E
Sbjct: 146 -PFTALNTAFMADGAYLYLPPRTVLAKPVHLIFLTT-----GRSEAVVTHSRNLIVLEPE 199
Query: 239 GEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ +IE + G ND Y+ N+V E+ GKG V H LQ +S + HI V+Q
Sbjct: 200 SELTVIEHYAGL--NDAVYFTNTVTEIAAGKGANVEHIKLQEESAKSFHIATIQVQQ 254
>gi|374263111|ref|ZP_09621663.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
gi|363536373|gb|EHL29815.1| ABC transporter, permease component [Legionella drancourtii LLAP12]
Length = 397
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLI-DGFIQNSALNLSN 147
+P R DE +++T + +++ ++D S ++I +G I +
Sbjct: 14 FPGRHDEEWKYTRVDALLKQPFAAYHHGLAAVPKASDLPIASQIVIHNGLISGVEVLAKT 73
Query: 148 LPDGVYV---GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVE 204
LP GV V + L ++K I + + G F + + L IY+PAG ++
Sbjct: 74 LPAGVLVLPLAAALISHPELLKPYLGMILKQEHGFHFLNTAMIHCGVL--IYLPAGVYLD 131
Query: 205 NPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEV 264
PI L+++ D + + R V++ E G + I+E++ G E N CY N+V EV
Sbjct: 132 EPIALRHIQ------DQTNQAV-HLRHVIIAEAGSQATIVEDYQGLE-NSCYLTNTVTEV 183
Query: 265 VIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+G K+ H +Q +S A H+ +V+Q
Sbjct: 184 FMGTNAKLTHCKIQRESKAAYHLGHLSVKQ 213
>gi|345871237|ref|ZP_08823184.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
gi|343920647|gb|EGV31376.1| FeS assembly protein SufD [Thiorhodococcus drewsii AZ1]
Length = 442
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
LF ++N G D V++V G +E PI L +LSV +D + ++ PR +V++E+G
Sbjct: 145 LFAALNTAGMDDGLVLFVARGVVLERPIELIHLSV---GLDEPR--VAQPRHLVVLEDGA 199
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ ++E +V G+ Y NSVLE+ +G+ ++H +Q +S NA HI
Sbjct: 200 QATLVERYVSL-GDSIYCTNSVLELALGRDALLKHDRIQMESPNAFHI 246
>gi|209963826|ref|YP_002296741.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
gi|209957292|gb|ACI97928.1| FeS assembly protein SufD [Rhodospirillum centenum SW]
Length = 439
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 38/258 (14%)
Query: 54 ESLEDSLPSSSSSLPQP-LP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+S + + +++LP LP L +LR + + T +P+ + E ++FT ++
Sbjct: 9 QSYVEQFKAHAATLPGAGLPWLDELRAAGLDRFVKTGFPTPRQESWKFT--------SLR 60
Query: 112 PITRPSSSLDVSTDAQFPS--------------LVLIDGFIQNSALNLSNLPDGVYVGSL 157
P+ R S L + A P+ +V + G + ++ LP G + SL
Sbjct: 61 PLERQSFGLAPALTAPVPAASIPTVAPDGGSHRMVFLGGRYRPDLSDIGGLPPGATLESL 120
Query: 158 ----LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ DG+ + + + G ++N D V+ + G V P+ L +LS
Sbjct: 121 GEALVRAPDGVAEHLGRTAT--LDGHPLLALNLAFLTDGVVLRLARGTVVAKPVELVFLS 178
Query: 214 VEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ G LP + +PR++VL EE E ++E VG C+ +N V E+V+G G ++
Sbjct: 179 SDDG------LPAAWHPRILVLAEENAEATLVEHHVGLGSATCF-SNIVAEIVLGAGARL 231
Query: 273 RHSYLQNQSLNAAHIKWT 290
H +Q +SL+ H+ T
Sbjct: 232 HHYKIQRESLSTIHLATT 249
>gi|114331235|ref|YP_747457.1| FeS assembly protein SufD [Nitrosomonas eutropha C91]
gi|114308249|gb|ABI59492.1| Iron-regulated ABC transporter permease protein SufD [Nitrosomonas
eutropha C91]
Length = 435
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS---QIQPITRPSSSLDVSTDAQFP 129
L +LR ++ + S P+ +DE +RFTD S ++++ + + P ST P
Sbjct: 30 LNRLRANALSRIESLRLPTIRDEEWRFTDISSLRNTLFPRASTASLPGLDSQKSTFLDEP 89
Query: 130 S--LVLIDGFIQNSALNLSNLPDG-----VYVGSLLGVSDGIMKRVSDFISEFQCGDLFW 182
+ LV +DG LS L D + L G+ ++ +++FQ D+F
Sbjct: 90 TCRLVFVDG---QYMPGLSGLTDDGSIIVCSLSELTGICASKTEQYLGQLADFQ-DDVFV 145
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N D I +PA + P+++ Y++ S K + PR +++ E EV
Sbjct: 146 ALNTALMHDGICIVIPANVSITVPVHILYIT-------SGKEVAAYPRCLLVAESEAEVT 198
Query: 243 IIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
I+EE+V +EG N+V E+ +G+ +V H +Q ++ A HI
Sbjct: 199 IVEEYVAWQEG--VSLTNAVTEIYVGESARVNHIRVQREASQAFHI 242
>gi|29654655|ref|NP_820347.1| FeS assembly protein SufD [Coxiella burnetii RSA 493]
gi|161831539|ref|YP_001597200.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
gi|29541923|gb|AAO90861.1| SufD [Coxiella burnetii RSA 493]
gi|161763406|gb|ABX79048.1| FeS assembly protein SufD [Coxiella burnetii RSA 331]
Length = 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQ 294
T++ Q
Sbjct: 226 NTSIHQ 231
>gi|212212267|ref|YP_002303203.1| SufD [Coxiella burnetii CbuG_Q212]
gi|212010677|gb|ACJ18058.1| SufD [Coxiella burnetii CbuG_Q212]
Length = 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 28/246 (11%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
E +L + + Q P QK +T L +P RK E +++T+ + PI
Sbjct: 6 ESALRALQNQNSQWHPWQK---EQLKTFLLHGFPHRKVENWKYTN--------VTPIAEQ 54
Query: 117 SSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
+ S +TD LV I+G +LS LP V + SL + I +
Sbjct: 55 AFSFGENTDTDIADFILPDAYRLVFINGHFAPRLSDLSGLPSAVQMTSLKNIQRDIQNEL 114
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ ++Q F +N D + VP C +E PI+L +LS + L +S
Sbjct: 115 A-IKKDYQTA--FSLMNDALFQDGLFLQVPKDCYLEKPIHLIHLSKP-----TASLTMSQ 166
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R V+L+EE + I EE+ G G Y+ N V ++ + + LQ + A HI
Sbjct: 167 IRHVILLEENAKAVIFEEYQGTNG-VAYFNNVVTQIKVNSAAHLELYKLQQEGDRAFHIA 225
Query: 289 WTAVRQ 294
T++ Q
Sbjct: 226 NTSIHQ 231
>gi|390949482|ref|YP_006413241.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
gi|390426051|gb|AFL73116.1| Iron-regulated ABC transporter permease protein SufD [Thiocystis
violascens DSM 198]
Length = 441
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSL--DVSTDAQFPSL-----VLIDGFIQNSA 142
P+ K E +R+T + + ++L D + P L VL++G
Sbjct: 45 PTSKTEDWRYTSLKGLLEQGFAQVDEAITALQPDDLEEILIPGLDSHRVVLVNGRYAPEL 104
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAG 200
L +LP GV +G L + D + D ++ LF ++N G D V
Sbjct: 105 SVLGDLPKGVRLGGLRALLDADPDALRDHLNRIADARQPLFLALNTAGLDDGFVALFDRA 164
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
+E PI L +LSV +D + ++ PR ++++ +G + +IE +V G Y NS
Sbjct: 165 VMLERPIELIHLSV---GLDEPR--VAQPRHLIVLGDGAQATLIERYVSL-GESLYCTNS 218
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHI 287
VLE+ +G+ ++H +Q +S NA H+
Sbjct: 219 VLEISLGRDAVLQHDRIQMESANAFHL 245
>gi|444919520|ref|ZP_21239535.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
gi|444708362|gb|ELW49433.1| Iron-sulfur cluster assembly protein SufD [Cystobacter fuscus DSM
2262]
Length = 441
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 22/256 (8%)
Query: 48 FVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+ + LAE + + + P L+ LR + L +P+ ++E +++T+ S +
Sbjct: 8 YYLDLAERFQAERAAGA-----PAWLRALRQDGIEQLARQGFPTSRNEDWKYTNVSSVSC 62
Query: 108 SQIQPI-TRPSSSLDVSTDAQF-----PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GV 160
P+ T +S++ + + Q P LV +DG L LP+G+ V SL +
Sbjct: 63 QSFCPVHTVHEASMEAAVELQRLPGPGPRLVFVDGRFVRELSRLDGLPEGLQVRSLREAL 122
Query: 161 SDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+G + + + + + F ++N + + V G P+ L +L+
Sbjct: 123 EEGAP--LEELVGQRARAESSAFTALNVALLEEGAWVDVAPGTVCAEPVQLLFLAR---- 176
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
L +++PRVVV E+ ++E +VG + N+V EVV+G G +V H LQ
Sbjct: 177 -GVATLSLASPRVVVRAGANSELTLVESYVGV-APGVSFTNAVTEVVLGDGARVTHLKLQ 234
Query: 279 NQSLNAAHIKWTAVRQ 294
+S A HI V Q
Sbjct: 235 AESEVAFHIGSLHVEQ 250
>gi|427712068|ref|YP_007060692.1| iron-regulated ABC transporter permease SufD [Synechococcus sp. PCC
6312]
gi|427376197|gb|AFY60149.1| Iron-regulated ABC transporter permease protein SufD [Synechococcus
sp. PCC 6312]
Length = 448
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD---AQFP 129
L +LR +++ L P+ + E +RFTD S+I + P P + T +
Sbjct: 45 LGQLRQTAADALHEQFIPTTRQEEWRFTDLSLITQAPFSPPAHPPDLATLPTQRIAEKHL 104
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+VL++G ++ N GV VG+L + + ++F ++N
Sbjct: 105 RMVLVNGVYAPDLSDVGNSHAGVMVGNLAQARPETLALLGQLPGR---EEVFTALNTASC 161
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D+ I V A I+L +L+ + + + +PRV+V+++ G + ++E+++
Sbjct: 162 RDVLTIEVGAKVCPGFVIHLVFLTT------APQATLISPRVLVVLQPGSSLTLVEDYIS 215
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E D N+V E+ +G ++ H+ +Q Q+ A HI T + Q
Sbjct: 216 GE-MDTALTNAVTEIYLGNQAELDHTRIQRQAPTALHIGKTVISQ 259
>gi|90424335|ref|YP_532705.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB18]
gi|90106349|gb|ABD88386.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisB18]
Length = 459
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+ LP P+ + R +S + S P+R+ E +++TD ++ + P +
Sbjct: 41 ARLPGSEPVTERRQASFEAYASKGLPNRRIEDWKYTDLRVLMREVLPLAAAPDEAALQRA 100
Query: 125 DA--------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISE 174
A LVL+DG S + + L + + SL V DG R +D ++
Sbjct: 101 AAALAQLETRDTTKLVLVDGVFAPSLSDHAGLEAAIEIRSLADVLGDDGNASR-ADLLNI 159
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D S+N A D +I V G V PI++ +++ ++ S R +
Sbjct: 160 KASADAMISLNAAMATDGVLITVADGASVGKPIHIVHVA-------TQSKAASYTRSFLK 212
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+ G V +E FVG G Y AN + + +G G ++ H L +L+A +I TAV
Sbjct: 213 LGNGARVTFVESFVGAAGAASYQANDAVVIWVGDGAELEHVRLMEDALDAINIS-TAV 269
>gi|430761125|ref|YP_007216982.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010749|gb|AGA33501.1| Iron-sulfur cluster assembly protein SufD [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 447
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 24/257 (9%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ +P L R ++ +P + E +++T+ I +
Sbjct: 6 LSKHYADQVQHLQEVLPEGMPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA---------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+P + +VS D +V +DG ++ +LS LP+G V L
Sbjct: 64 -KPFVAAAGDAEVSADTVRALGFGGLDAYRMVFVDGRLRRDLSDLSELPEGAVVQGLGEA 122
Query: 161 SDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ F++ F ++N D ++ + G ++E P++L L G
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGALVRLAQGIRLERPLHLLMLGSAG-- 180
Query: 219 VDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
PI S+PRV++ EG E +IE + G + + N+V E+ G +VRH L
Sbjct: 181 ----DTPIWSHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLL 235
Query: 278 QNQSLNAAHIKWTAVRQ 294
Q+ + A H+ V+Q
Sbjct: 236 QDHADGAYHVGSVFVQQ 252
>gi|406941606|gb|EKD74053.1| hypothetical protein ACD_45C00096G0002 [uncultured bacterium]
Length = 417
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR--PSSSLDVSTDA----QFPS--LVL 133
+ L+ P+R +E F++ D S + S + TR +++L DA + PS LVL
Sbjct: 16 EAFLAHGLPNRSNERFKYHDFSFLLKSALANATRLDETAALRECVDAHRLREKPSILLVL 75
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--------FWSIN 185
++G+ + +L +PD V + D++ ++ G L F +N
Sbjct: 76 VNGYFVPALSDLERIPDDAIVTCI----HEARTLYPDWVEQY--GSLPIDQTKYPFAELN 129
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D IY+ AGC + +PI+L LS+ G N ++ I+ P +++++ + +IE
Sbjct: 130 AQSYSDGLFIYLKAGCNLTDPIHL--LSI-GMNTEA---FIAQPHHIIVLDIASRLTLIE 183
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+V N ++ VV+ + H +QN+ +A H T ++Q
Sbjct: 184 EYVSLHDAVSCLTNVLMNVVLKEKTFFNHCKIQNEQSSALHCSNTFIKQ 232
>gi|412991263|emb|CCO16108.1| FeS assembly protein SufD [Bathycoccus prasinos]
Length = 527
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-----AQ 127
++++R S+S+ L + P+ +DE +RF D S I S+ + + S DV D A
Sbjct: 95 VERMRSSASKQLSESKTPTNRDESWRFFDVSEITSATL--VREDDSEADVEEDMKAFLAD 152
Query: 128 FPSLVLIDGFIQN------SALNLSNLPDGVYVGSLLG--VSDGIMKRVSDFISEFQCGD 179
P + F+ S+++ + +GV + + ++ I D E Q G
Sbjct: 153 VPEGAKVVAFVNGRFSEKWSSIDEDD-KNGVSISRTISGDIATAIGTYDEDEEVEGQ-GA 210
Query: 180 LFWSINGMGAPDLGVIYVPAGCK-VENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
+F IN A V + + VEN +Y+ + + +L +N RV +
Sbjct: 211 IFARINKSCARSDNVACITVKSENVENIVYIIHARRSSKDRKDGELATGANARVFIDALA 270
Query: 238 GGEVGIIEEFV-----GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
V ++E++ GK+ + YWAN V+E+ + + +V HS Q+ A H + T V
Sbjct: 271 KSSVSVVEKYATVGGSGKKHDSRYWANDVVEIHLAENARVFHSLSQDHGREAVHTRATYV 330
Query: 293 RQ 294
RQ
Sbjct: 331 RQ 332
>gi|374370072|ref|ZP_09628085.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
gi|373098374|gb|EHP39482.1| FeS assembly protein SufD [Cupriavidus basilensis OR16]
Length = 444
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L + R + + +P+ + E +++T + I+ S+ P++S D A +
Sbjct: 28 LARARKQALECFAQAGFPTLRHEDWKYTSVAAIEKSRF--TAGPAASGDKPDAALLAARL 85
Query: 131 ----------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF----ISEFQ 176
+V ++G Q + LP G + SL + + + V +SE
Sbjct: 86 ETLALPGAYLMVFVNGRHQPQWSRIGALPAGAELLSLATMMECTPEPVEALLCRPVSELP 145
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP--ISNPRVVVL 234
G F ++N D I + AG + PI+L +++ E P +++ R +V+
Sbjct: 146 SG--FAALNTAFMADGAYIRLAAGTAPDMPIHLLFIATE---------PELVTHTRNLVM 194
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
EEG V I+E VG +G Y+ NSV ++V + V H +Q +SL A HI
Sbjct: 195 AEEGSRVCIVEHHVGVDGL-AYFTNSVTDIVAARDAHVEHHKVQQESLKAFHI 246
>gi|115372504|ref|ZP_01459812.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|310819044|ref|YP_003951402.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|115370466|gb|EAU69393.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
gi|309392116|gb|ADO69575.1| FeS assembly protein SufD [Stigmatella aurantiaca DW4/3-1]
Length = 441
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ-- 127
P+ L+ LR + L +P+ + E +++TD + I S P P + + +
Sbjct: 23 PVWLRTLRQEGLERLAQAGFPTTRHEAWKYTDVAPIVSRPFVPAW-PGKRVHLEACVEQR 81
Query: 128 ---FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FW 182
P V +DG + +L LP GV V SL + + + + + F
Sbjct: 82 ALPGPRWVFVDGLLAPELSSLEGLPPGVRVMSLREAVREEGEALEAVLGQRARAEAHPFV 141
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
++N + + V G + P+ L +L V G D +++PR+VV V E
Sbjct: 142 ALNAALLEEGVFVRVAPGTVAQVPVQLLFL-VSG---DGAAQVLASPRIVVDVGANAEAA 197
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E + G+E + + N+V EVV+G+ ++ H LQ ++ A H+ RQ
Sbjct: 198 LVEFYAGEE-DGASFTNAVTEVVLGENARLHHYKLQAETEGAYHLASLHARQ 248
>gi|392375425|ref|YP_003207258.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
gi|258593118|emb|CBE69429.1| sufD, needed for fhuF Fe-S center production/stability [Candidatus
Methylomirabilis oxyfera]
Length = 480
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 38/257 (14%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS-------TDA 126
Q++R ++ + +P+ + E +++T+ + I ++ + + +L + D
Sbjct: 31 QQIRTAAFGRFIELGFPTTRLEDWKYTNVAPIITTAFRRAGQAQRTLPIEPIESFTLEDV 90
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GDLFWSI 184
LV ++G + +L LP GV V +L V V +++ F ++
Sbjct: 91 ACAQLVFVNGCYSSDLSSLKKLPAGVVVSNLATVLACNPASVKPHLAQHAGFHNQAFVAL 150
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLS---------------------------VEGG 217
N D +++P G V+ PI+L ++S +GG
Sbjct: 151 NTAFMEDGAFVFIPKGTVVDAPIHLLFVSSSPCDSALGRPPSTEFGAGFESPVPAGFQGG 210
Query: 218 NVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
D + +S PR +++VE +V +IE +VG G+D Y N+V E+V G+ + +
Sbjct: 211 ADDKSSVASVSYPRNLIVVESHSQVRVIESYVGM-GHDVYCTNAVTEIVGGENAVIDYYK 269
Query: 277 LQNQSLNAAHIKWTAVR 293
+Q +S A H+ V+
Sbjct: 270 VQRESEEAFHVATAQVQ 286
>gi|158425237|ref|YP_001526529.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
gi|158332126|dbj|BAF89611.1| FeS assembly protein [Azorhizobium caulinodans ORS 571]
Length = 445
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 28/232 (12%)
Query: 75 KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ--FPSL- 131
+LR +++ P+R+ E +++TD I + P+ P LD S +A+ F +L
Sbjct: 39 ELRRAAATAFSEGGLPTRRVEEWKYTDLKAILRDAV-PLAGP---LDASAEAEGSFKALT 94
Query: 132 -------VLIDGFIQNSALNLSNLPDGVY---VGSLLGVSDGIMKRVSDFISEFQCGDLF 181
+ ++G + A +L L G+ + S + +D + +R+ + Q D
Sbjct: 95 VPGAKRILFVNGALARPASDLLALESGIAALPLESAIASNDPLAERIGAL--QPQRYDAP 152
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGE 240
++N + + ++ V AG K+ P+++ NV + P++ RVVV+VE+G E
Sbjct: 153 LALNTVFLGEGLLVRVAAGAKIAAPLHI-------ANVFTGDDPVATYGRVVVVVEDGAE 205
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
V ++E F G++G Y N+ LE+ +G G V +Q + A H+ V
Sbjct: 206 VTLVESFQGRDGV-AYQTNTALELFVGDGAHVDLVRVQEEGDAALHLSTVMV 256
>gi|326334712|ref|ZP_08200919.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693162|gb|EGD35094.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 433
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P++K E + +T + ++++ QP+ + ++ L
Sbjct: 21 LKDIRKEAFSFFAEKGFPNKKVEAWEYTSLTELQATDYHLWQPVNKKTTLLPEVLYKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
A LV ++G+ +S ++ L GV V SLL + + K FI ++ + GD+
Sbjct: 81 ADCYQLVFVNGYY-SSEMSSKELT-GVTVTSLL---EALHKGGEAFIQKYFNANTEKGDI 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +IN A + I VP G VE PI L Y + D K+ PR +++V E +
Sbjct: 136 FTAINTAFASEGVYIEVPKGKVVEKPIQLLYFN------DRKETTCYQPRNIIVVGENAQ 189
Query: 241 VGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE + N+V EV + K + + LQN SL A+ I T + Q
Sbjct: 190 LKVIEMHQNLSDAATAILTNAVTEVFVAKNAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|313675023|ref|YP_004053019.1| fes assembly protein sufd [Marivirga tractuosa DSM 4126]
gi|312941721|gb|ADR20911.1| FeS assembly protein SufD [Marivirga tractuosa DSM 4126]
Length = 441
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 22/261 (8%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F I ++ E SL S PL R + +P K E +++++ + +
Sbjct: 10 DKFFIGQFKAFESSLNGESKK-----PLHAKRKQAIDNFKELGFPHAKHEEYKYSNVAKM 64
Query: 106 --KSSQIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGS 156
K + ++ S SL + +++ LV ++G + N ++ LP GV++ +
Sbjct: 65 FGKLFNVGNLSDDSFSLSLDEASKYFIPELDAIRLVFVNGVLDNKLSDMETLPKGVHIQA 124
Query: 157 LLGVSDGIMKRVSDFIS--EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ +D + + E + D F +N + + A VE PI Y +
Sbjct: 125 IKTAADDYAEDFEKHFNTHEIEGADNFSELNTAFTNGGVFVKIDANAVVETPIACYYFN- 183
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
+ N D IS PR +V+ ++ + +IE +V G + + N+V E+V+ +
Sbjct: 184 DAKNAD----VISQPRNLVIAKKNSQASLIESYVTL-GENTSFTNAVTEIVMEDDCVFNY 238
Query: 275 SYLQNQSLNAAHIKWTAVRQL 295
QN+S A + T V QL
Sbjct: 239 YKYQNESDQAIQVGATMVHQL 259
>gi|388455287|ref|ZP_10137582.1| component of SufBCD complex [Fluoribacter dumoffii Tex-KL]
Length = 430
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 105/268 (39%), Gaps = 54/268 (20%)
Query: 58 DSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
D + ++ LP L +++ + L +P+ DE +++T + +P
Sbjct: 6 DFYQQQAKAICSALPWLAQMQTKALMDLHQHGFPTHHDENWKYTRVDALFKQTFKPSVEA 65
Query: 117 SSS-------LDVSTDAQFP---SLVLIDGFIQNSALNLSNLPDGV-------------- 152
SS D + A P +++ +G I LP+GV
Sbjct: 66 ESSKESASTRADEKSYADLPVKHKVLIQNGTILGVEQLAKALPEGVLILPLSVALIRHPE 125
Query: 153 ----YVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
Y+G++L G + I CG IY+PAG +E PI
Sbjct: 126 LLKPYLGTILKQEHGFHYLNTAMI---HCGVF--------------IYIPAGTLIEEPIA 168
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
L + V ++ R +++ E + IIE++ G + CY N V EV++G
Sbjct: 169 LSH-------VQNQMQQAVYLRHLIIAEANSQATIIEDYQGS-ADCCYLTNKVTEVMVGT 220
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQLV 296
G K+ H +Q +S A H+ +V+QL
Sbjct: 221 GAKLTHCTIQRESKAAFHLGHLSVKQLA 248
>gi|88811717|ref|ZP_01126971.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
gi|88791108|gb|EAR22221.1| FeS assembly protein SufD [Nitrococcus mobilis Nb-231]
Length = 443
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 15/234 (6%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS-- 119
+ S+ P L +LR + + +P RK E +R TD + + P + P
Sbjct: 17 AHSAHQDAPEWLARLRQHGIECFEAQGFPGRKVEAWRKTDLTPVLREHFVPASGPGQMGP 76
Query: 120 ---LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
V Q LV +DG+ ++ LP+G+ + L + + + + + F
Sbjct: 77 ELLEKVGVLGQVHRLVFVDGWFDPGLSDVDKLPNGLTLAPLSEYGERLPAVIQEALGGFV 136
Query: 177 CGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
+ F ++N D +++V G VE P+ + +L D + + PR V++
Sbjct: 137 DTETHPFTALNTAFFRDGAIMHVARGATVEQPVVVVHLLTP--EADRRAV---YPRTVLV 191
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHI 287
EE +V +IE+FVG ++ + N V E+V +G V + +Q + +AH+
Sbjct: 192 AEEASQVTLIEQFVG--ADEPFALNCPVTEIVARQGANVDYYKVQEEGAGSAHL 243
>gi|116695455|ref|YP_841031.1| iron sulfur cluster assembly protein SufD [Ralstonia eutropha H16]
gi|113529954|emb|CAJ96301.1| iron sulfur cluster assembly protein (SufD),ABC-type transporter
involved in Fe-S cluster assembly,Fe-S family [Ralstonia
eutropha H16]
Length = 443
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSLDVSTDAQFPSL--------VLIDGFIQ 139
+P+ + E +++T + ++ S+ + + S D + AQ +L V ++G Q
Sbjct: 44 FPTLRHEDWKYTSVAALERSRFAVALPQAGDSPDPAVAAQIEALALAGAQLMVFVNGTHQ 103
Query: 140 NSALNLSNLPDGVYVGSLLGVSDG--------IMKRVSDFISEFQCGDLFWSINGMGAPD 191
+ LP G+ + SL + ++ R SD+ S F ++ + +G
Sbjct: 104 PQWSRIGTLPAGIELASLAATLERAPDCLEALLLCRTSDYPSGFAALNMAFMTDG----- 158
Query: 192 LGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE 251
I V AG E PI+L +L+ + +L ++ R +V+ + G +V I+E G +
Sbjct: 159 -AYIRVAAGTVPEQPIHLLFLAT------AAELA-THARNLVVAQAGSQVCIVEHHAGLD 210
Query: 252 GNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G Y N++ ++V + +V H LQ +SL A HI
Sbjct: 211 GL-AYCTNTITDIVAERDAQVEHHKLQQESLKAFHI 245
>gi|406915041|gb|EKD54168.1| hypothetical protein ACD_60C00119G0014 [uncultured bacterium]
Length = 418
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 12/226 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP--ITRPSSSLDVSTDAQFPS 130
L R SQ L WP++K+E F++T+ S P P + S A
Sbjct: 15 LDDFRLKQSQIFLKRGWPTKKEECFKYTEIKNTISENKNPHFTDLPERNYFFSEIAAI-R 73
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGDL-FWSINGMG 188
++ I+G+ N+ LP G+ + +L + + +++ EF F +N
Sbjct: 74 MIFINGYFVAHLSNVEKLPGGIAIYTLQKALEKKESIIQSYLTREFDEKRFPFAVLNASV 133
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D + + K PI+L ++ + I +PR +V+ +V +IEE V
Sbjct: 134 MKDGMFLEISKNTKTSLPIHLVFI-----HTGEDHFTI-HPRNIVVARPDSKVILIEEHV 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G E Y+ N+V ++ G+ + + +QN+S A H+ V Q
Sbjct: 188 G-ENAKHYFTNTVTDIHAGENASIEYYKIQNESHTATHVANVFVTQ 232
>gi|325982997|ref|YP_004295399.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
gi|325532516|gb|ADZ27237.1| FeS assembly protein SufD [Nitrosomonas sp. AL212]
Length = 435
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 60 LPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS 118
L S S+ +PL L +LR + + + P+++DE +RFTD S + Q +P +
Sbjct: 14 LKSWSTKSNEPLSWLNQLRARAIDHVSTQRLPTKRDEEWRFTDISALTRLSFQS-AQPHT 72
Query: 119 SLDVSTDAQF------PSLVLIDGF--------IQNSALNLSNLPDGVYVGSLLGVSDGI 164
+L SLV +DG+ + ++ L + NL + L +
Sbjct: 73 NLQTQDIEHLYLKEAKSSLVFVDGYYSPQLSTHVDSAVLQIGNL------STFLLTQPSV 126
Query: 165 MKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
++ ++F ++F ++N D +I P + PI+L +++ +
Sbjct: 127 LESHFGQYAKFD-NNVFAALNTAFLRDCALIIAPKNTVIAEPIHLLFIATQSE------- 178
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
PR +++ E G +V +E++V Y NSV E+ + +H +Q +S A
Sbjct: 179 VTCYPRCLIIGEPGSDVTFVEDYVSLR-ETAYVTNSVTEISLSANAHAKHIRIQRESAQA 237
Query: 285 AHIKWTAV 292
H+ AV
Sbjct: 238 YHLANCAV 245
>gi|91790109|ref|YP_551061.1| FeS assembly protein SufD [Polaromonas sp. JS666]
gi|91699334|gb|ABE46163.1| Iron-regulated ABC transporter permease protein SufD [Polaromonas
sp. JS666]
Length = 447
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 25/247 (10%)
Query: 58 DSLPSSSSSLPQ-PLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----I 110
D +SLP LP L++ R++ + T P+ + E +++T + I+ + +
Sbjct: 11 DEFARLKASLPGGHLPWLRRAREAGLASFADTGLPTLRQEDWKYTSVAAIEKGRFVLATL 70
Query: 111 QPITRPSSSLDVSTDAQFPS---LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
P T + D P LV ++G Q ++ LP GV + SL + + +
Sbjct: 71 TPPTPNGVTAQQIEDWSLPDTQRLVFVNGHYQPRWSRIAPLPAGVTLASLAELLERDPEC 130
Query: 168 VSDFIS----EFQCG---DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + + G F ++N D +++ AG ++ PI+L +++ E G
Sbjct: 131 LESLLGPTPHAYPSGCYPSAFAALNAAFMSDGAYVHLAAGVALDTPIHLLFVTTEAG--- 187
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
L + R +V+ + G +IE V G Y+ N + ++V G+ ++ H LQ +
Sbjct: 188 ---LAVQT-RNLVVADAGSRASLIEHHVAV-GEGAYFTNVITDLVAGRDAEIEHHKLQQE 242
Query: 281 SLNAAHI 287
SL A H+
Sbjct: 243 SLKAFHV 249
>gi|344943945|ref|ZP_08783231.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
gi|344259603|gb|EGW19876.1| FeS assembly protein SufD [Methylobacter tundripaludum SV96]
Length = 440
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 24/238 (10%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-ITRPSSSLDVSTDA 126
Q LP L+ LR + + +PS ++E +R+T+ S I+ P ++ + LD
Sbjct: 23 QALPWLKALRAEALMAFSAHGFPSPREEEWRYTNVSGIEKKLFSPSLSLTAGDLDSEWLK 82
Query: 127 QFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK---RVSDFI--SEFQ 176
+ S+VL++G NL++LP V S++ ++D ++K +V ++ + Q
Sbjct: 83 SYQLEDTWSVVLVNGHFSAELSNLTDLPSTV---SVMSMADALVKQPDKVEKYLGTAADQ 139
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
F + N D ++VP + PI L ++ V G + ++ R +++ +
Sbjct: 140 SEHSFIAFNTAWFTDGLFVHVPVKQVLNKPIQLLHI-VTGSD------AMATTRNIIIAD 192
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E E +IE FVG ++ Y +V EV +G V +Q++S A H + ++Q
Sbjct: 193 EMAEAKVIETFVGI--DNAYLTAAVTEVFVGSNADVTLYKMQSESDKAYHFGGSYIKQ 248
>gi|359786382|ref|ZP_09289517.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
gi|359296232|gb|EHK60485.1| Fe-S cluster assembly protein SufD [Halomonas sp. GFAJ-1]
Length = 446
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 13/212 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P+R+DE +++TD I S + P L +DG ++ +
Sbjct: 41 FPTRRDEEWKYTDVRTIAQGNFALADNAEFSQATAATLTLPLDAYRLTFVDGVFSSALSD 100
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCK 202
L LP V V L + V + D F ++N + V+ + G
Sbjct: 101 LEALPSSVQVMPLSKALSENHEAVGGPLGRLTGVDFSAFAALNTAFTEEGAVVRIAPGTV 160
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L++LS G V + +PR++V E IIE + G E + + N V
Sbjct: 161 VEKPILLQFLSRAGSPV------MCHPRILVEAAGRSEATIIEHYAG-EADAANFTNVVA 213
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+++ +G + H LQ L H+ V Q
Sbjct: 214 ELMLDRGAILNHYKLQEAPLGDMHVASIHVEQ 245
>gi|22299448|ref|NP_682695.1| hypothetical protein tlr1905 [Thermosynechococcus elongatus BP-1]
gi|22295631|dbj|BAC09457.1| tlr1905 [Thermosynechococcus elongatus BP-1]
Length = 432
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L LR ++ L P+ +DE +RFTD S++++ QP P + L+ A+ L+
Sbjct: 38 LAVLRQTARDRLHEQTLPTPRDEDWRFTDLSVLRTRTFQP---PIAPLNPEIVAEVQHLL 94
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL 192
F + + L DG + G L V ++ + + ++F +N +
Sbjct: 95 CERSFPTVAQIVLI---DGYFCGELSRVDAAGVELLPPSLPAIAPPEVFSDLNAAMLAER 151
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+ + + P+ + ++S ++ + +PR+ V V G+V +IE F+ G
Sbjct: 152 LCLRLSGHFR--EPVEVFFVS------SRQQQSVVSPRLTVEVAAHGQVTLIERFLSLTG 203
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
D + N+V E+ +G + H +Q+QS A HI TAV Q
Sbjct: 204 -DQQFTNTVTEISLGAAAGLHHVRIQHQSPTAIHIGSTAVCQ 244
>gi|86140875|ref|ZP_01059434.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
gi|85832817|gb|EAQ51266.1| FeS assembly protein SufD [Leeuwenhoekiella blandensis MED217]
Length = 437
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 21/253 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQK----LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L SS + + ++D + + + +PS+KDE +++T + +
Sbjct: 2 SLKDKLLSSYLTFQENTSFDNSILDIKDQAIKVFETEGFPSKKDENWKYTSLNSVTKPDY 61
Query: 111 QPITRPSSSLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSD 162
++ +++ Q+ +V IDG + +S L+ DGV V L ++
Sbjct: 62 SLVSHADDAIEFKDVKQYFLNDIDTFKIVFIDG-VYSSYLS-ETTHDGVDVCLLSSALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ + ++N A + IYVP V PI + +LS S
Sbjct: 120 PKFKQVIDVYFNKIAKKESLTALNTAFAKEGAYIYVPKSRAVNKPIQIVHLST-----GS 174
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++ EE EV +IE N + NSV E+ GK +V + +QN
Sbjct: 175 EANLMLQPRNLIVAEENAEVQVIERHQSLSSN-AVFTNSVTEIYAGKHARVDYYKIQNDK 233
Query: 282 LNAAHIKWTAVRQ 294
NA+ I T + Q
Sbjct: 234 ENASLIDNTHIDQ 246
>gi|350561305|ref|ZP_08930144.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781412|gb|EGZ35720.1| FeS assembly protein SufD [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 447
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 24/257 (9%)
Query: 52 LAESLEDSLPSSSSSLPQPLP--LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
L++ D + LP+ LP L R ++ +P + E +++T+ I +
Sbjct: 6 LSQHYADQVQHLQEILPEGLPEWLAGRRRGAAVRFAEAGFPDPRMEEWKYTNVRPIAT-- 63
Query: 110 IQPITRPSSSLDVSTDA----QFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+P + DVS D F L V +DG ++ NL+ LP+G V L
Sbjct: 64 -KPFVAAAGDADVSADTVRALGFDGLDAYRMVFVDGRLRRDLSNLAGLPEGAVVQGLGEA 122
Query: 161 SDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ F++ F ++N D V+ + G ++E P++L L G
Sbjct: 123 LATDPDPLEPFLATLAHDRFSSFAALNTAFMNDGAVVRLAPGVRLERPLHLLLLGSAG-- 180
Query: 219 VDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
P S+PRV++ EG E +IE + G + + N+V E+ G +VRH L
Sbjct: 181 ----DAPTWSHPRVLIQAGEGAEATVIEHYADLPGANGF-TNTVTELRAEAGARVRHYLL 235
Query: 278 QNQSLNAAHIKWTAVRQ 294
Q+ + A H+ V+Q
Sbjct: 236 QDHADGAYHVGSVFVQQ 252
>gi|431931545|ref|YP_007244591.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
gi|431829848|gb|AGA90961.1| FeS assembly protein SufD [Thioflavicoccus mobilis 8321]
Length = 444
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSA 142
P+ K E +R+T + P + + ++ +VL+DG
Sbjct: 46 PTSKHEAWRYTGLKGLIEQGFAPYREATPETNTGELSRHLIDGLESHRVVLVDGRFAAGL 105
Query: 143 LNLSNLPDGVYVGSLLGV----SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVP 198
L LP GV + L V D + R++ LF ++N D V+ V
Sbjct: 106 SALDGLPAGVRIAGLGQVLRQDPDAVRGRLAQVAG--TGAHLFAALNTAAMSDGLVVLVE 163
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWA 258
G ++E PI L +L+V + + PR ++ + +G + +IE FVG+ G Y
Sbjct: 164 PGVRLERPIELIHLAV-----GAAGPGVVQPRHLIALGDGAQATLIERFVGR-GGARYCT 217
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N V EV +G+ + H +Q ++ A HI
Sbjct: 218 NLVAEVTLGRDAGLEHYRVQTEAPEAFHI 246
>gi|163796147|ref|ZP_02190109.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
gi|159178606|gb|EDP63146.1| FeS assembly protein SufD [alpha proteobacterium BAL199]
Length = 429
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I + G E PI L ++ GG+ I++PRV+V+VEEG ++ +G
Sbjct: 145 IRIARGVMPEAPILLS-MATSGGD---GATAIAHPRVLVVVEEGASADLVTV---HQGTG 197
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
Y AN V E+++G G ++ HS LQ ++ A H+ T+VR
Sbjct: 198 AYMANPVTEIIVGAGARLSHSVLQAEAAEAFHVAMTSVR 236
>gi|92113361|ref|YP_573289.1| FeS assembly protein SufD [Chromohalobacter salexigens DSM 3043]
gi|91796451|gb|ABE58590.1| Iron-regulated ABC transporter permease protein SufD
[Chromohalobacter salexigens DSM 3043]
Length = 445
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS-------SLD 121
+P + R + + + +P+++DE +++TD I + +T + +L
Sbjct: 18 EPTWVTARRQAGAARFEALGFPTKRDEAWKYTDVRRIAEGEF-ALTYDAELSASRFEALS 76
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL- 180
+ DA LV +DG + ++ LP+G+ + L + + I D
Sbjct: 77 MPLDAY--RLVFVDGVFSTALSDVEALPEGISIEPLTTAMRTNHEAIGGAIGRLAGVDFS 134
Query: 181 -FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEG 238
F ++N + + V+ + G V+ PIY+ + S + + P +S+PRV+V+
Sbjct: 135 PFTALNVALSEEGAVVRIGQGVVVDKPIYVVFAS------RANEAPRMSHPRVLVMAGAR 188
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE + G+ G + N V EV++ +G V H LQ S H+ V Q
Sbjct: 189 SQSTVIEHYAGETGA-ANFTNVVSEVMLERGAIVDHYKLQEASSEDLHVASIHVEQ 243
>gi|296136902|ref|YP_003644144.1| FeS assembly protein SufD [Thiomonas intermedia K12]
gi|295797024|gb|ADG31814.1| FeS assembly protein SufD [Thiomonas intermedia K12]
Length = 439
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST---- 124
+P + + R + + LL + P+R E +++T + + + +T PS+ L+
Sbjct: 21 EPARVAQARRQALEALLRSGLPTRHSEDWKYTSLRALDAMDL-AVTAPSARLNEEALRAA 79
Query: 125 ------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
DA P LV +DG L++LP GV + + G
Sbjct: 80 GALLVGDA--PRLVFVDGAFDAELSRLNDLPPGVSLAPWGARQSPSATGAGTVLDAAAPG 137
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F +IN M A D + + AG ++ PI + + G S+ R + + +G
Sbjct: 138 GAFDAINRMFARDGMALELGAGVCLDAPIVVVMVQTRAG--------ASHVRHALRLGQG 189
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE+ +G Y A+SV + +G K++H LQ++S A H+
Sbjct: 190 SSARVIEQHLGLAQVGPYLASSVTRAELARGAKLQHVRLQDESDAAVHV 238
>gi|390944982|ref|YP_006408743.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
gi|390418410|gb|AFL85988.1| Iron-regulated ABC transporter permease protein SufD [Belliella
baltica DSM 15883]
Length = 425
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV-S 123
+++PQ + LR+SS + L P K+E ++FT S I T PS ++ + S
Sbjct: 15 TNIPQYSSFEDLRNSSLEFLKKNGLPHLKEEEYKFTQISKKLEQNITAFT-PSKNISISS 73
Query: 124 TDAQFPSLVLIDG--FIQNSAL---NLSNLPDGVYVGSLLGVSDG-IMKRVSDFISEFQC 177
+D + DG + N+ L LS++ Y S L S ++ ++ F S
Sbjct: 74 SDVKSNLFEGFDGDVIVFNNGLLDTQLSSISSKNYSFSKLSDSKSELLGNIATFES---- 129
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F ++N +G D I G KVE PI +L + G I PR+++ V
Sbjct: 130 -DPFTALNNIGFEDGLHIQTAKGKKVEKPIAFLLFNQANEG-------QIIQPRILIEVA 181
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
E +V IE + + + Y++N+V+EV + + + LQN++ A
Sbjct: 182 ENSDVTFIENTISAD-EEAYFSNAVVEVKVAQNSHAYYYRLQNENRKA 228
>gi|294626269|ref|ZP_06704872.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292599415|gb|EFF43549.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 420
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ +I V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLIRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + +G + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARMQAGSAHA 222
>gi|154248387|ref|YP_001419345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154162472|gb|ABS69688.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS--------SQIQPITRPSSSLDVS 123
L +L + + + P+R+ E +++TD + ++ S +LDV
Sbjct: 37 LGELSADALEAFRAHGLPNRRVEEWKYTDLRAAVRDFPPLAGSPGTAAEAEAASQTLDVP 96
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVY---VGSLLGVSDGIMKRVSDFISEFQCGDL 180
A+ L+ + G + A + + LP GV + + D ++ R+ + G L
Sbjct: 97 HAAR---LLFVSGALARGASDFAGLPAGVSALPLDAAKAAHDPLVDRIGSLQPDRYDGAL 153
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
+ +G + V+ V AG + P++L Y+ +++ R VV+V +G E
Sbjct: 154 ALNTGFLG--EGLVMKVDAGTRAAKPVHLAYV------FPAEEAVAGFTRTVVVVGDGAE 205
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ ++E F G+EG Y AN +E+V+G G V LQ + +A H+
Sbjct: 206 LTLVESFTGREGV-AYQANHAMELVVGDGATVNLVRLQEEGASALHL 251
>gi|407781307|ref|ZP_11128526.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
gi|407208190|gb|EKE78116.1| ABC transporter involved in Fe-S cluster assembly protein SufD
[Oceanibaculum indicum P24]
Length = 442
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI---------TRPSSSLDVS 123
L LR S+ P+ + E +RFT+ + + P + P+SSL ++
Sbjct: 30 LAALRADSAARCRQNGLPTTRVEAWRFTNLKDLVAGDFTPAGNVPDMALDSLPASSL-LA 88
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--- 180
+ L ++G + + LPDGV +LL +S+ I R + G L
Sbjct: 89 VNGHV--LAFVNGRFRAELSTIDALPDGV---ALLPLSEAI--RTDEQSLSAHLGHLTEA 141
Query: 181 ----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
F +N D V+ + G ++ P++L V G V + + PR++V++
Sbjct: 142 EENPFADLNTAFLEDGLVLRLADGVTLDRPVHL----VSIGAVADRAVAFF-PRLLVVLG 196
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
+G + + E G G Y++N V+E V+G+G + H LQN+S A HI T +
Sbjct: 197 KGTKATLFESHAGLGG--AYFSNGVMEAVLGEGAHLEHYKLQNESPEAFHIANTRI 250
>gi|381151144|ref|ZP_09863013.1| FeS assembly protein SufD [Methylomicrobium album BG8]
gi|380883116|gb|EIC28993.1| FeS assembly protein SufD [Methylomicrobium album BG8]
Length = 440
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 71 LPLQKLRDSSSQTLLSTP-WPSRKDEPFRFTDTSMIKSSQIQP-ITRPSSSLDVSTDAQF 128
LP K R + L + +PS ++E +R+T+ S I+ P ++ P+S++D + +
Sbjct: 25 LPWLKQRRHDALALFAAGGFPSLREEEWRYTNVSAIEKKLFSPLLSAPASAVDQAWIDSY 84
Query: 129 P-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLG--------VSDGIMKRVSDFISEF 175
S+VL++G +L++LP+ V V S+ V + K V+D F
Sbjct: 85 RLQDAWSIVLLNGRFSAELSSLASLPNDVLVLSMADALRQYSERVEEHFGKAVADSEHGF 144
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+ W +G+ +++PA + P+ L ++ E ++ R +++V
Sbjct: 145 VAFNTAWFSDGL------FVHIPAKQVLAKPLQLLHVVTESD-------ALATTRNLIVV 191
Query: 236 EEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + ++E ++G DC Y A SV EV +G ++ LQ +S A H T V Q
Sbjct: 192 DPMAQAEVVETYIGA---DCAYLAASVNEVFVGANAELALYKLQAESAKAYHFGGTYVAQ 248
>gi|270158825|ref|ZP_06187482.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|289166382|ref|YP_003456520.1| component of SufBCD complex [Legionella longbeachae NSW150]
gi|269990850|gb|EEZ97104.1| FeS assembly protein SufD [Legionella longbeachae D-4968]
gi|288859555|emb|CBJ13520.1| component of SufBCD complex [Legionella longbeachae NSW150]
Length = 426
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 62 SSSSSLPQPLPLQ--KLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQPI 113
+S SSLP LQ LRD L +P+R DE +++T + S + S ++ +
Sbjct: 14 TSLSSLPWLAHLQTKALRD-----LHRRGFPTRHDEDWKYTSVDGLLNQSFLPVSNLESV 68
Query: 114 TRPSSSLDVSTDAQFPSLVLIDG--FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF 171
+PS D+ D +L+ + + L S LP GV V L +S I++
Sbjct: 69 AKPSH-YDLEFDLPITQKILLQNGSYFSDDRLT-SVLPKGVIV---LPLSAAIIQHPE-- 121
Query: 172 ISEFQCGDLFWSINGMGAPDLGVI------YVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ E G++ +G + +I Y+P G +E PI L + V ++
Sbjct: 122 LLEPYLGNILKQEHGFHYLNTAMIHCGVMIYIPKGVVLEEPIALTH-------VQTRMNQ 174
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
R V++ E +IE++ G + Y N+V E+++G ++ H +Q +S +A
Sbjct: 175 AVYLRHVIIAEANSRATVIEDYQGLP-DGSYLTNTVTEILVGANAQLTHYKIQRESKSAY 233
Query: 286 HIKWTAVRQL 295
H+ AV+QL
Sbjct: 234 HVGHVAVKQL 243
>gi|42521820|ref|NP_967200.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
gi|39574350|emb|CAE77854.1| Transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus HD100]
Length = 419
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+
Sbjct: 11 SQSNPADGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPVEPSHE 70
Query: 119 SL---DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+L + + +F ++V +G + N L+ ++LP GV +K +S + ++F
Sbjct: 71 TLVEIKKNLNPEFANIVFFNGVL-NKTLS-ADLPAGVS-----------LKELSQYPAQF 117
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLP--ISNPRVV 232
D F ++NG ++ V VE P+ ++ + S EGG P + NPR+
Sbjct: 118 D--DTFDALNGAYMAKPFLVTVAKETSVEKPVNFVFFTSAEGG-------PSLMVNPRLS 168
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+ V V ++E GK G Y+ANSV +V +G+ K+ + +Q +S +A +I T
Sbjct: 169 LDVGARSSVRVLESHYGKAGT-TYFANSVSDVHVGESAKLVYVRVQAESESAVNIGRT 225
>gi|85817042|gb|EAQ38226.1| FeS assembly protein SufD [Dokdonia donghaensis MED134]
Length = 437
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 21/253 (8%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYGIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG + +S L+ DG+ V ++ ++
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDIDTYKIVFVDG-VYSSYLS-ETTHDGIDVCTMGAALTK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ G+ ++N A D IY+P G + PI + + S G D+
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDALNTAYAKDGAYIYIPKGKVAQKPIQIVHFST--GTNDA 177
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +++ EE EV IIE N V E+ K V + +QN
Sbjct: 178 MMLQ---PRNLIVAEENSEVQIIERHQSLSEKKV-LTNVVTEIFADKRALVDYYKIQNDK 233
Query: 282 LNAAHIKWTAVRQ 294
L+A+ I T + Q
Sbjct: 234 LDASLIDTTEIEQ 246
>gi|390989906|ref|ZP_10260199.1| feS assembly protein SufD [Xanthomonas axonopodis pv. punicae str.
LMG 859]
gi|372555350|emb|CCF67174.1| feS assembly protein SufD [Xanthomonas axonopodis pv. punicae str.
LMG 859]
Length = 420
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + +G + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHA 222
>gi|319786703|ref|YP_004146178.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
gi|317465215|gb|ADV26947.1| FeS assembly protein SufD [Pseudoxanthomonas suwonensis 11-1]
Length = 435
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 10/227 (4%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI--TRPSSSLDVSTD 125
P+ L R ++ LL+ P ++E +++T ++ P T P+ V
Sbjct: 18 PEAQELGPGRRAALDALLADGLPGPREEAWKYTPLRALERRGFAPADATAPAFDAGVLEG 77
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI-SEFQCGD-LFWS 183
P LV +G + +L+ LP G V +L V + R ++F+ ++ D +F
Sbjct: 78 IPAPRLVFANGRFDAAHSDLAGLPAGASVEALSQVLERGEPRDANFLLRRYERRDEVFAR 137
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
N A + V+ + AG ++ P++L ++ V + L R + + EG + I
Sbjct: 138 ANAALAEEGAVVRLDAGVRLPAPLHLVFVGVAQEGDRAWHL-----RHFIDLREGAALDI 192
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+E +G G +N VL + GKG VRH+ +Q S A+ T
Sbjct: 193 VEHQLGA-GEHANLSNDVLHLHAGKGAVVRHARVQADSARASRFART 238
>gi|332292133|ref|YP_004430742.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
gi|332170219|gb|AEE19474.1| FeS assembly protein SufD [Krokinobacter sp. 4H-3-7-5]
Length = 437
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+D L S+ L + + P+ +R+ + +T + +P++K E +++T + I
Sbjct: 2 SLKDKLVSNHIVLQESIDADSPIYDIRNEAIKTFEAEGFPTKKLENWKYTSLNSILKEDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSD 162
++LD Q+ +V +DG S+ DG+ V ++ +S
Sbjct: 62 NIFPSKEAALDFKDVKQYFLNDVDTYKIVFVDGVY--SSFLSETTHDGIDVCTMGAALSK 119
Query: 163 GIMKRVSD-FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
K+V D + ++ G+ S+N A D IY+P G + PI + + + G N
Sbjct: 120 PKYKQVIDVYFNKIAKGESMDSLNTAFAKDGAYIYIPKGKVAQKPIQIVHFAT-GAN--- 175
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++ EE EV IIE N V E+ K V + +QN +
Sbjct: 176 -EAMMLQPRNLIVAEENSEVQIIERHQSLTDKKV-LTNVVTEIFADKRALVDYYKIQNDN 233
Query: 282 LNAAHIKWTAVRQ 294
L+A+ + T + Q
Sbjct: 234 LSASLVDTTEIEQ 246
>gi|21243664|ref|NP_643246.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
gi|21109242|gb|AAM37782.1| ABC transporter permease [Xanthomonas axonopodis pv. citri str.
306]
Length = 420
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + +G + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHA 222
>gi|346725751|ref|YP_004852420.1| iron-regulated ABC-type transporter [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650498|gb|AEO43122.1| iron-regulated ABC-type transporter [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 420
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDEAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + ++ L G + ++E +
Sbjct: 135 EGVLVRVQAGAQIELPLHLVFVGVAG----EQDLSWHHRHLIAL-RAGAALQVVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + ANSV+ V + +G + H+ +Q S A
Sbjct: 189 VGDAAHLANSVMHVHLAQGAALSHARVQAGSAQA 222
>gi|448746842|ref|ZP_21728507.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
gi|445565770|gb|ELY21879.1| SUF system FeS cluster assembly, SufD [Halomonas titanicae BH1]
Length = 446
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 89 WPSRKDEPFRFTDTSMIK--------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
+P+R+DE +++TD I +++ P T +++L + DA L +DG +
Sbjct: 41 FPTRRDEEWKYTDVRSIAQGNFAIADNAEFSPAT--AAALTLPIDAY--RLTFVDGVFSS 96
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVP 198
+ +L +LP V V L + V + D F ++N + V+ +
Sbjct: 97 ALSDLDSLPSSVQVLPLSKALAENHEAVGGPLGRLIGVDFSPFAALNTAFMEEGAVVRIA 156
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCY 256
G VE PI L++LS G V + +PR VLVE GG E +IE + G E
Sbjct: 157 PGTVVEKPILLQFLSRAGQPV------MCHPR--VLVEAGGRSEATLIEHYTG-ESEAAN 207
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ N V E+++ +G + H LQ L H+ V Q
Sbjct: 208 FTNVVGELMLDRGAILAHYKLQEAPLGDLHVASIHVEQ 245
>gi|359395489|ref|ZP_09188541.1| UPF0051 protein slr [Halomonas boliviensis LC1]
gi|357969754|gb|EHJ92201.1| UPF0051 protein slr [Halomonas boliviensis LC1]
Length = 446
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 89 WPSRKDEPFRFTDT--------SMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
+P+R+DE +++TD ++ ++ P + +++L + DA L +DG +
Sbjct: 41 FPTRRDEEWKYTDVRSIAQGSFALADDAEFSPAS--AAALTLPIDAY--RLTFVDGVFSS 96
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVP 198
+ ++ +LP V V L + V + D F ++N + V+ +
Sbjct: 97 ALSDVDSLPSSVQVLPLSKALAENHEAVGGPLGRLTGVDFSPFAALNTAFMEEGAVVRIA 156
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCY 256
G VE PI L++LS G V +S+PR VLVE GG E +IE + G E
Sbjct: 157 PGTVVEKPILLQFLSRAGQPV------MSHPR--VLVEAGGRSEATLIEHYTG-ESEATN 207
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ N V E+++ +G + H LQ L H+ V Q
Sbjct: 208 FTNVVGELMLDRGAILAHYKLQEAPLGDMHVASIHVEQ 245
>gi|78048637|ref|YP_364812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325925549|ref|ZP_08186937.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|418516646|ref|ZP_13082818.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|78037067|emb|CAJ24812.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325544053|gb|EGD15448.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
perforans 91-118]
gi|410706662|gb|EKQ65120.1| ABC transporter-associated protein involved in Fe-S cluster
assembly [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 420
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDEAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + ++E +
Sbjct: 135 EGVLVRVQAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + ANSV+ V + +G + H+ +Q S +A
Sbjct: 189 VGDAAHLANSVMHVHLAQGAALSHARVQAGSAHA 222
>gi|336450976|ref|ZP_08621422.1| FeS assembly protein SufD [Idiomarina sp. A28L]
gi|336282232|gb|EGN75470.1| FeS assembly protein SufD [Idiomarina sp. A28L]
Length = 422
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA----QF 128
L +R ++ TL WP+R+ E +R+T + ++ S+++ A
Sbjct: 19 LSPVRQTALATLREQAWPTRRTEAWRYTSLHEVAELELAQANSAQSTVNAEAPAIEGLNS 78
Query: 129 PSLVLIDGFIQNSALNLSN--LPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSIN 185
LV +D + S LP+GV V SL GV+ R+S ++ + LF +N
Sbjct: 79 LDLVFVDA---QPVTDFSKLILPEGVTVTSLHGVNADQQARISKIFNQAKPTHHLFGLVN 135
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ A VI V AG ++E PI + +G S+ RV+V V + +V +IE
Sbjct: 136 DVLAEQGVVIDVAAGAEIEQPIRIVNFVTDGVE--------SHHRVLVNVGDNAKVTVIE 187
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
GN + E V+G K+ H A H+
Sbjct: 188 H---GAGNGHSMNTAYAEYVLGSETKLEHYRFAMHGQEAIHM 226
>gi|344345304|ref|ZP_08776158.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
gi|343803133|gb|EGV21045.1| FeS assembly protein SufD [Marichromatium purpuratum 984]
Length = 431
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
+VL++G L LP+GV + SL L D + R LF ++N G
Sbjct: 83 VVLVNGRYAPEHGRLGALPEGVRIDSLARLLAEDPEVVRPHLGALADDPAALFPALNAAG 142
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D V+ + G ++E P+ L +++ ++ ++ PR ++++ EG E ++E +V
Sbjct: 143 GADGLVLLLAPGARLERPLELLHVTT------GERPTLAQPRHLIVLGEGAEARLVERYV 196
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G E + + N+VLE+ + ++ H +Q+ S + H+ +RQ
Sbjct: 197 GAEPSIAHATNAVLEIDLAAAARLDHECIQHDSPESFHLSTLYLRQ 242
>gi|124005856|ref|ZP_01690694.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
gi|123988539|gb|EAY28180.1| FeS assembly protein SufD [Microscilla marina ATCC 23134]
Length = 442
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 22/235 (9%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-SMIKSSQIQPITRPSSSLDVSTDAQF-- 128
P+ K+R + Q+ +P+ K E +++T+ ++K + T P D+ QF
Sbjct: 31 PIHKIRQQAIQSFDGLGFPTTKHEEWKYTNLGKVLKEAYTFGQTSPLQKADIE---QFFL 87
Query: 129 ------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--L 180
++V ++G Q + + + D + V +L D V ++ +
Sbjct: 88 PNMPKANNIVFVNGVYQPTLSQIVSSEDVLVVKNLEEAYDTHTTLVEPHFAQLANSEEEA 147
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS-VEGGNVDSKKLPISNPRVVVLVEEGG 239
++N D I+VPA VE P L +++ GNV + PR +++VE+G
Sbjct: 148 LIALNTAFVQDGVFIHVPANKVVEAPTVLYFINDARNGNVGVQ------PRSLIVVEQGA 201
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +++ G ++N+V+EVV+ ++ H +QN NA+++ T V+Q
Sbjct: 202 QATFVDK-TDTIGGQASFSNAVMEVVVEPNARMTHYKVQNDQPNASYVGTTQVKQ 255
>gi|442318214|ref|YP_007358235.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
gi|441485856|gb|AGC42551.1| FeS assembly protein SufD [Myxococcus stipitatus DSM 14675]
Length = 442
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--RPSSSLDVSTDAQ 127
P L +LR P+ +DE +++T+ + I P++ R ++ L + A+
Sbjct: 23 PAWLARLRQEGLAHFERLGLPTTRDEAWKYTNVAPIADGAFAPVSSVRDAAELKAAV-AR 81
Query: 128 F----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCGDLF 181
P LV +DG + ++ L GV + L V DG F
Sbjct: 82 LALPGPRLVFVDGRLAPELSSVEGLARGVSLKPLRDVWAEDGAWLAEELGQRALAAEHAF 141
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D V+ + E P+ L +L+ V +++PRV+V+ EG E
Sbjct: 142 TALNAALLEDGAVLRLAPRALSETPVQLLFLTRGDAPV------LASPRVLVVAGEGSEA 195
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E + G + N+V EV +G ++H +Q++ +A H+ VRQ
Sbjct: 196 TLVETYASVTGGSGPTFTNAVTEVTLGDNASLKHYRVQSEGDSALHVGGLHVRQ 249
>gi|375013273|ref|YP_004990261.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
gi|359349197|gb|AEV33616.1| FeS assembly protein SufD [Owenweeksia hongkongensis DSM 17368]
Length = 439
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 22/255 (8%)
Query: 54 ESLEDSLPSSSSSLPQPL------PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
E+L+D L SS L P+ K+R ++ + + +P++KDE +++T+ I
Sbjct: 2 EALKDKLESSFIVFENELDDDAKKPVHKIRQNAFKRFEESGFPTKKDEEWKYTNLKPILK 61
Query: 108 SQIQPITRPSSSLDVS-------TDAQFPSLVLIDGFIQN-SALNLSNLPDGVYVGSLLG 159
+ + + + +++D +D LV IDG + + + D + S+L
Sbjct: 62 NDFRILNKSENAIDFKDVRRYFLSDVDSYKLVFIDGVFSSWLSETTHDKFDICTLSSMLN 121
Query: 160 VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ + K+ F + SIN A + I + V+ P+ + + + +
Sbjct: 122 RYEDVTKKY--FNKALPQAETMASINTAFAKEGAFIRIKKNQTVDKPVQIVFFTT-AHDY 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
D ++ PR +V+VEE EV I+E N+ E+ K ++ + +QN
Sbjct: 179 D----IMTQPRNLVVVEENAEVKIVERHQSLSEKPV-LTNTATEIFAEKNSRLFYYKVQN 233
Query: 280 QSLNAAHIKWTAVRQ 294
++ A+ I T V+Q
Sbjct: 234 DNMEASIIDSTTVKQ 248
>gi|392964323|ref|ZP_10329744.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
gi|387847218|emb|CCH51788.1| FeS assembly protein SufD [Fibrisoma limi BUZ 3]
Length = 441
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 27/237 (11%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPS 130
PL +LR S+ Q +P+ K E +++++ S+IK + S D+ D Q P+
Sbjct: 33 PLHQLRRSALQQFERLGFPTIKHEEWKYSNVNSLIKQAFDIDGASSISEADMD-DLQIPN 91
Query: 131 L-----VLIDGFIQNSALNLSNLPDGVYVGSLLG-------VSDGIMKRVSDFISEFQCG 178
L ++G + + + + V + S + D R +D+
Sbjct: 92 LEGNILYFVNGQYKPDLSRIVSPAEQVQITSFAEALKAEPELIDKHFARYADY-----QD 146
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
+ F ++N A D V+ VP G VE PI L++++ D+++ I S PR +++V
Sbjct: 147 NAFTALNTALANDGVVVRVPNGKTVEQPIILRFIT------DAREKNIASQPRNLIIVGR 200
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EV + E + G+ ++N+V E+V+ + + ++ +QN+S A HI T V Q
Sbjct: 201 NAEVTLAESY-RTLGDRSSFSNAVTEIVVEQDARAQYYKVQNESEAAYHIGTTQVYQ 256
>gi|294664774|ref|ZP_06730100.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605461|gb|EFF48786.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 420
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL------LGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
+G + +LS LP+GV + +L G + ++ R D E +F +N
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASGQAQQLLGRRFDGSDE-----VFARLNAAL 132
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + +I V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 133 ADEGVLIRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + +G + H+ +Q S +A
Sbjct: 188 -HVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHA 222
>gi|384440330|ref|YP_005655054.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
gi|359291463|gb|AEV16980.1| SufD protein (Membrane protein) [Thermus sp. CCB_US3_UF1]
Length = 431
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 27/235 (11%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + S +L +PL L + R + + L P+PS+K+E +R+TD S ++ Q + P
Sbjct: 9 LEAISQALSEPLWLLEKRLKALEAFLRLPYPSKKEENWRYTDLS--EAPLEQEVEAPRG- 65
Query: 120 LDVSTDAQFPSLVL-------IDGFIQNSALNL--SNLPDGVYVGSLLGVSDGIMKRVSD 170
L +S DA P V + GF+ +L + +P+ + L+ S +
Sbjct: 66 LKLSRDA-LPEAVRRRLEKTDVSGFLVFVGPDLVYAEVPEELLAKGLVFTSLAEALKTHP 124
Query: 171 FISE---FQ---CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
E FQ D F ++N +YVPAG +VE P+ + + +EGG
Sbjct: 125 HKVESALFQGVYTEDKFAALNAAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGGKA----- 179
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S R ++ +E+ + IEE++ + + S E+++ G ++RH+++Q
Sbjct: 180 --SAGRSLLFLEDNAKAAYIEEYLSPDLSPTLHL-SATEMLLRPGARLRHAHVQT 231
>gi|357405358|ref|YP_004917282.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
gi|351718023|emb|CCE23688.1| FeS assembly protein SufD [Methylomicrobium alcaliphilum 20Z]
Length = 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 56 LEDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+E +LP S LP L+ LR + + +PS ++E +R+T+ S I+ + +P
Sbjct: 16 IETTLPGGS------LPWLRALRSDALKQFSGRGFPSLREEEWRYTNVSGIEKNLFEPRL 69
Query: 115 RPSSS------LDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV 168
PS + L+ A +VL+DG+ +L++LP+ V V SL + + ++
Sbjct: 70 EPSDNQIDKDWLENYRLADCWQIVLVDGYYSPELSDLADLPENVTVKSLSELLEADAGQI 129
Query: 169 SDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ + D F + N I +PA ++ P+ L ++ D +L
Sbjct: 130 ETYFGQAVGIDEHSFVAFNTAWFTGGAFIRIPAKTVLDKPVQLLHVV-----TDPNRLAT 184
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+ R +V+ E + I+E +VG + Y + S+ EV + + + +Q +S A H
Sbjct: 185 T--RNLVIAESMAQAQIVETYVGT--DQSYLSASITEVFVEQNADLTLYKVQCESEKAYH 240
Query: 287 IKWTAVRQ 294
T V+Q
Sbjct: 241 FGGTYVKQ 248
>gi|329901919|ref|ZP_08272987.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
gi|327548918|gb|EGF33540.1| Iron-sulfur cluster assembly protein SufD [Oxalobacteraceae
bacterium IMCC9480]
Length = 440
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD------TSMIKS--SQIQPI 113
++ +S+P + R ++ LL+ P+ +DE +RFTD T+ + + S+ P+
Sbjct: 14 TAQASIPSWTGALRARGAARFALLA--RPTTRDEEWRFTDLSPFAQTAFVAAPGSKTSPL 71
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
T + ++ D LV +DG I AL++ D + V L + +
Sbjct: 72 TLADIA-GLTVDEAQTRLVFVDG-IYAPALSIRQDDDHLVVADLQTAPARHAHTIEAHLG 129
Query: 174 EFQCGD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
D F + N + V+ VP + P++L ++ ++K + PR
Sbjct: 130 RHASIDTAYFAAQNTASIENAAVVIVPRDSAITAPVHLLFIG-------TQKDVLGFPRA 182
Query: 232 VVLVEEGGEVGIIEEFV------GKEGND--CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+++ E G V ++E++V G+E Y+ N+V E+ + +V H LQ +
Sbjct: 183 LIVAEPGSSVTVLEDYVVLNPPGGQEEAHLATYFTNTVTEIALADSARVNHIRLQREGNR 242
Query: 284 AAHIKWTAV 292
A H+ AV
Sbjct: 243 ALHVGLCAV 251
>gi|381172330|ref|ZP_09881460.1| FeS assembly protein SufD [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|380687174|emb|CCG37947.1| FeS assembly protein SufD [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
Length = 420
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHR-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + +G + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQGAALSHARVQAGSAHA 222
>gi|357416831|ref|YP_004929851.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
gi|355334409|gb|AER55810.1| iron ABC transporter permease [Pseudoxanthomonas spadix BD-a59]
Length = 420
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 78 DSSSQTLL----STPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--L 131
DS+ +T+L + P++++E +++T ++ P+ + + +D + A P+ L
Sbjct: 15 DSARRTVLDEALAAGLPTQREEAWKYTSLRALERRSFAPV-QVAPPVDAAPIAHIPAPRL 73
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGIMKRVSDFIS-EFQCGD-LFWSINGMG 188
VL++G S +LS L DG+ V L +++G + F++ F+ GD +F +N
Sbjct: 74 VLVNGRHVESLSDLSGLADGISVQRLSQALAEG--GDAARFLARRFERGDEVFARLNAAL 131
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + ++ AG + P+ L ++ G DS + R ++ + G ++ ++E +
Sbjct: 132 ATEGVLVRAEAGVQAATPLQLVFI----GAADSTDRAW-HLRHLIELRAGAQLRVVEHHL 186
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
G + AN++ V + +G ++ H+ LQ++S
Sbjct: 187 AA-GEHAHLANTLTHVHLAQGAQLVHARLQHES 218
>gi|388257768|ref|ZP_10134947.1| FeS assembly protein SufD [Cellvibrio sp. BR]
gi|387938935|gb|EIK45487.1| FeS assembly protein SufD [Cellvibrio sp. BR]
Length = 442
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 19/228 (8%)
Query: 69 QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVST 124
QPL LQ R +++ L+ WP+RK E +++T ++ + + S + LD
Sbjct: 16 QPLQWLQSFRAAAANDWLAQAWPTRKTEHWKYTPLQSLQKTLLTAFGNRSGFSAELDAEL 75
Query: 125 DAQFP-----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD 179
Q LV I+G L+++ V ++++ I E +
Sbjct: 76 RRQLIPLDALRLVFINGVFDADNSILADV--AVRFSQANSEQQALIEKHLGKIVEGE-RH 132
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
LF ++N + +++VP ++E P+Y+ N+ S SN R++++++E
Sbjct: 133 LFATLNNAWLEEGVLLHVPCNQRLEKPVYIV-------NITSGAACASNQRLLIVLDENA 185
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ ++E + + NS+ E+ + G ++H L ++ A H+
Sbjct: 186 QAEVVEHYFTCGAAQTGFVNSLTEIYLADGANLQHYRLNMEAEQAQHV 233
>gi|339000118|ref|ZP_08638740.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
gi|338762993|gb|EGP18003.1| Fe-S cluster assembly protein SufD [Halomonas sp. TD01]
Length = 446
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGFIQNSALN 144
+P+R+DE +++TD I S + P L +DG + +
Sbjct: 41 FPTRRDEEWKYTDVRTIAQGNFALAENADFSQAQAAALTLPLDAYRLTFVDGVFSAALSD 100
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCK 202
L LP V V L + V + D F ++N + V+ + G
Sbjct: 101 LEALPSSVQVMPLSKALADNHEAVGGPLGRLTGVDFSPFAALNTAFMEEGAVVRIAPGTV 160
Query: 203 VENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVL 262
VE PI L+++S G V + +PR++V E +IE +VG E + N V
Sbjct: 161 VEKPILLQFMSRAGTPV------MCHPRILVEAAGRSEATLIEHYVG-ETEAANFTNVVA 213
Query: 263 EVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+++ +G + H LQ L H+ V Q
Sbjct: 214 ELMLDRGAILNHYKLQEAPLGDMHVASIHVEQ 245
>gi|402832459|ref|ZP_10881105.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
gi|402277249|gb|EJU26333.1| FeS assembly protein SufD [Capnocytophaga sp. CM59]
Length = 432
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 31/256 (12%)
Query: 55 SLEDSLPSSSSSLP-QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI--- 110
+L+D ++ + P Q L+ +R + + +S +P +K E +++T ++++
Sbjct: 3 NLKDKWEAAFAQFPHQNDILKDIRQEALRFFVSNGFPHKKIEAWKYTSLDGVQATDYVLW 62
Query: 111 QPITRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
QP T +L + +A P LV ++GF +S ++ + + D V LL +
Sbjct: 63 QP-THAKKTL--AAEALHPYRIEGSHLLVFVNGFF-SSEMSDAAVADFT-VTPLL---EA 114
Query: 164 IMKRVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ K +DF+ ++ + GD+F ++N A + I VP G VE PI L YLS
Sbjct: 115 LHKGGADFVGKYFNAATEKGDVFTALNTAYAAEGVYIEVPKGKVVEKPIQLLYLS----- 169
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
D PR ++ V E E+ +IE N+V EV + K + + LQ
Sbjct: 170 -DVGTPTCFQPRNIISVGERAELKVIEMHHNLSQAQV-LTNAVTEVFVAKEAHLDYYKLQ 227
Query: 279 NQSLNAAHIKWTAVRQ 294
N +L A+ I T + Q
Sbjct: 228 NDALQASLIDNTYISQ 243
>gi|426402180|ref|YP_007021151.1| [Fe-S] cluster assembly transport protein [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425858848|gb|AFX99883.1| transport protein involved in the [Fe-S] cluster assembly
[Bdellovibrio bacteriovorus str. Tiberius]
Length = 419
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 36/239 (15%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-----SQIQPITRPSS 118
S S P L R + L+ P+RKDE + +T + S + P+ PS
Sbjct: 11 SQSNPAEGALSAFRKAGYDYALNKGLPTRKDEDWHYTSVKTLNEGTFLPSAVNPL-EPSH 69
Query: 119 SLDVST----DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V + +F ++V +G + N L+ + LP GV +K VS + +
Sbjct: 70 DTLVEIKKYLNPEFANIVFFNGVL-NKTLS-AELPAGV-----------TLKDVSQYPVQ 116
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLP--ISNPRV 231
F D F ++NG V+ V VE P+ ++ + SVEGG P + +PR+
Sbjct: 117 FD--DTFDALNGAYMAKPFVVTVAKETSVEKPVNFVFFTSVEGG-------PSLMVHPRL 167
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+ V ++E GK G Y+ANSV +V +G+ K + +Q +S +A +I T
Sbjct: 168 SFEIGARSYVRVLESHYGKAGT-TYFANSVSDVHVGESAKFVYVRVQAESESAVNIGRT 225
>gi|260910874|ref|ZP_05917518.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635025|gb|EEX53071.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 447
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 34/244 (13%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S+ I L E+ D + + S+++ + LR+++ + +P+RK E +++TD S
Sbjct: 3 SEKQYIDLFEANRDVISAHSTAV-----MNVLREAAFEDFKRLGFPTRKTEKYKYTDISK 57
Query: 105 IKSS----QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA-----LNLSNLPDGVYVG 155
+ +Q + P + +V + P L + F+ N A + LPDGV +
Sbjct: 58 LFEPDFGLNLQRLPIPINPYEVFS-CDVPRLSTANHFVVNDAFLHPTMPHKQLPDGVVIT 116
Query: 156 SLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
SL ++ + DFI+++ D ++N M A D ++YVP G K+E I
Sbjct: 117 SLCEYAE----KNPDFIAKYYGKLASTAEDGVTALNTMLAQDGLLVYVPRGVKIEQTI-- 170
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW-ANSVLEVVIGK 268
+ +++ VD + N RV+++VE E + F +D ++ A V+E +G
Sbjct: 171 QVINILHAEVD----LMVNRRVLIIVEPQAEAKFL--FCDHTFDDRHFLATQVIEAFVGD 224
Query: 269 GGKV 272
++
Sbjct: 225 NARL 228
>gi|405355139|ref|ZP_11024365.1| Iron-sulfur cluster assembly protein SufD [Chondromyces apiculatus
DSM 436]
gi|397091481|gb|EJJ22283.1| Iron-sulfur cluster assembly protein SufD [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 446
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 24/236 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L+ LR + P+ +DE ++++ + I QP+ R + D + A
Sbjct: 28 LKHLRADALAHFERQGLPTPRDEAWKYSRLAPIAEGAFQPVVRDAR--DAAHLASVVERL 85
Query: 129 ----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCG--DL 180
P LV +DG + +++ LP G+ + L DG + + + +
Sbjct: 86 ALPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGAL--LESLVGQRALAKEHA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N + ++ + G E P+ L +L+ G V +S+PR++V E E
Sbjct: 144 FTALNAALLEEGALLRLAPGALSEAPVQLLFLTRGEGPV------LSSPRILVDAGESSE 197
Query: 241 VGIIEEFV--GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E + G G+ + N+V EV +G + H LQ ++ A H+ RQ
Sbjct: 198 ATLVETYASAGPAGSGATFTNAVTEVTLGDNASLHHYKLQAEADAALHVGALHARQ 253
>gi|299472231|emb|CBN77201.1| FeS assembly protein SufD [Ectocarpus siliculosus]
Length = 524
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 27/249 (10%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
++P+P L +L + L P+RK EP+R+TD + + +++ + +
Sbjct: 129 AVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPTTTAAETAAA 188
Query: 126 --------AQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVSDGIMKRVSDFIS-- 173
+Q +V ++G + ++S L +G+ G + + + + + +S
Sbjct: 189 IKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYL 248
Query: 174 -----EFQC--GDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+F+ G L F S+N D GVI V G VE PI + + S EG +
Sbjct: 249 PEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFS-EG----EEGPT 303
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
+S+PR+VV V + + ++ + G AN V++G V H Y + S +
Sbjct: 304 VSHPRLVVKAGADSHVTLTQSYLSRGG--VCLANGFTRVLVGDRATVTHDYAEEMSASDR 361
Query: 286 HIKWTAVRQ 294
+ +V Q
Sbjct: 362 LVDTVSVDQ 370
>gi|255039511|ref|YP_003090132.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
gi|254952267|gb|ACT96967.1| FeS assembly protein SufD [Dyadobacter fermentans DSM 18053]
Length = 439
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSAL 143
+PS K E +++++ + S S L D + P+ L ++G S
Sbjct: 47 FPSIKHEEWKYSNVRDLISVSYDFNAESSIGLAELEDLKVPAQEANILYFVNGRYDASLS 106
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYVPAGC 201
+ + + + + SL +V+ F +E D F ++N D I++P
Sbjct: 107 TIISPVEKITISSLAEAYKNDPAKVASFFNELTKDAEDAFTALNTAFTQDGVFIHIPDNQ 166
Query: 202 KVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
VE+PI L+++S D+++ + S PR ++ V + V + E F G+ + N+
Sbjct: 167 SVEHPIILRFVS------DAREQHVGSQPRNIIWVGKNAHVKMAEAFRTL-GDQRSFTNA 219
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
V E+ + + V++ +QN+S NA HI T VR L
Sbjct: 220 VTEIHVAEEANVQYYKVQNESENAYHIGTTQVRML 254
>gi|288800581|ref|ZP_06406039.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332794|gb|EFC71274.1| FeS assembly protein SufD [Prevotella sp. oral taxon 299 str.
F0039]
Length = 461
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 48/257 (18%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
IQL E+ ++ L +S+ + R + Q P RKDE +++TD
Sbjct: 22 IQLFEAEQNLLCQNSAP-----AMNAKRAEALQHFKQLGIPQRKDERYKYTD-------- 68
Query: 110 IQPITRPSSSLDVST-----------DAQFPSLVLIDGFIQNSALNLS-----NLPDGVY 153
+Q I P L++ P+L F+ N +++ +LP+GV
Sbjct: 69 MQAIFAPDYGLNLHRMPFSFRPEEVFSCDVPNLSTAVYFLMNDVFDVNSLPKGHLPEGVV 128
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
V SL + +K DFI ++ D ++N M A D ++YVP KVE I
Sbjct: 129 VDSL---KEYALKN-PDFIEKYYAKLAATDKDGIAALNTMLAQDGLLVYVPKNTKVEKTI 184
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVI 266
+ +++ +VD + N RV+++VE G EV ++ F ND Y A V+E +
Sbjct: 185 --QVINIMRSDVD----LMLNRRVLIVVEPGAEVKML--FCDHTANDRNYLATQVIEAYV 236
Query: 267 GKGGKVRHSYLQNQSLN 283
G+ + ++ S N
Sbjct: 237 GENASLDLYCMEETSYN 253
>gi|429740124|ref|ZP_19273832.1| FeS assembly protein SufD [Prevotella saccharolytica F0055]
gi|429154225|gb|EKX96967.1| FeS assembly protein SufD [Prevotella saccharolytica F0055]
Length = 446
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 53/271 (19%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
I L E + SS + + +RD++ + +PSRK E +R+TD
Sbjct: 8 IDLYERYRKVIFDHSSDI-----MNAVRDTAFEDFKRQGFPSRKVERYRYTD-------- 54
Query: 110 IQPITRPSSSLDVST-----------DAQFPSLVLIDGFIQNSALNLSN-----LPDGVY 153
IQ + P L+++ P+L + F+ N A N LPDGV
Sbjct: 55 IQEVFAPDYGLNLNRLDIPVNPYEAFKCDVPNLSTTNYFVVNDAFYKDNLPKATLPDGVI 114
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
V SL V+ + +FI ++ D ++N M A D +YVP G KV+ I
Sbjct: 115 VDSLRDVA----VQNPNFIGKYYAKLAETNKDAVTALNTMLAQDGLFVYVPKGVKVDKTI 170
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW-ANSVLEVVI 266
+ +++ +VD + N RV+++VE EV + F +D ++ A V+E +
Sbjct: 171 --QVINILRSDVD----LMVNRRVLIVVEPDAEVKFL--FCDHAFDDRHFLATQVIEAYV 222
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
H+ L + H K T V + +
Sbjct: 223 AD-----HACLDLYCMEETHEKSTRVSNVYI 248
>gi|338213041|ref|YP_004657096.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
gi|336306862|gb|AEI49964.1| FeS assembly protein SufD [Runella slithyformis DSM 19594]
Length = 439
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL-PISNPRVVVLVEE 237
D F ++N A D V++VP G VE PI L++++ DS+ + S PR +++V +
Sbjct: 145 DAFTALNTAFAHDGVVVHVPEGKVVEEPIILRFIT------DSRSVNAASQPRNLIVVGK 198
Query: 238 GGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EV + E F +G G+ + N V E+V+ + V++ +QN++ A HI T V Q
Sbjct: 199 NAEVKMAESFRTIGDNGS---FTNVVTEIVVEENANVQYYKVQNETEKAYHIGTTQVLQ 254
>gi|170747131|ref|YP_001753391.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
gi|170653653|gb|ACB22708.1| SufBD protein [Methylobacterium radiotolerans JCM 2831]
Length = 440
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 34/222 (15%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA---------- 126
R+ + + +T PSR+ E F++TD + P P SLDV+ A
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAP--SLDVAEAAVARAKGFSGI 91
Query: 127 QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------ 180
+ L ++G + +L +P+GV V + +SD + + D Q +
Sbjct: 92 EAARLTFVNGHLVRELSDLDGIPEGVTV---VPMSDALTRAHVDLK---QLAPVPQAREN 145
Query: 181 -FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEG 238
+ +N D +I V G K P++L++ V + P S RV+V + EG
Sbjct: 146 PVYQLNTAFLADGALITVAPGAKPARPLHLRF-------VGAGDAPFSTATRVLVQLGEG 198
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
E ++E G +G C N L+VV+G RH+ L +
Sbjct: 199 AEFSLLESHEGPDGLTC-QPNDALDVVVGPRAAFRHTRLNTE 239
>gi|253996497|ref|YP_003048561.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
gi|253983176|gb|ACT48034.1| FeS assembly protein SufD [Methylotenera mobilis JLW8]
Length = 442
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 24/216 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPS----- 130
R ++ + + +PSR++E +++TD SMI K + P P + S++A+ +
Sbjct: 32 RKAAFKRFEAHGFPSRREEEWKYTDVSMISKRGTLAPDNIPP---EASSEAKLLAWSLSS 88
Query: 131 -----LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
+V ++G N L +LP GV + SL + + + + +F ++N
Sbjct: 89 ERMHLMVFVNGHFDNGLSTLDDLPAGVQLSSLADMLEDGAELPKPLFQQQHEHTVFSALN 148
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D V+ + G ++ PIYL ++ G PR++V+ G IIE
Sbjct: 149 NAFVTDGAVLNIAPGIVLDKPIYLLLIASGHGTA-------IYPRIIVMAGAGTRATIIE 201
Query: 246 EFVGKEGNDCY-WANSVLEVVIGKGGKVRHSYLQNQ 280
++G D + + N+ ++ + G + H L +
Sbjct: 202 HYMGTL--DAHNFTNATTQLNLDAGASIEHCKLTQE 235
>gi|332284498|ref|YP_004416409.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
gi|330428451|gb|AEC19785.1| hypothetical protein PT7_1245 [Pusillimonas sp. T7-7]
Length = 435
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL---DVSTDAQFP 129
L +R + + S WP+ K E +R T + ++ P + S + V +
Sbjct: 26 LAAMRKRAIERFASEGWPTTKQENWRHTSLATLEQQSFLPAGQASVADLVNQVRANESGH 85
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV DG + ++ +LP G + +L V D + G ++N A
Sbjct: 86 WLVFTDGRFDPALSDIGDLPGGAQILALSAALADSPDTVQDLFGDETQGASTAALNLALA 145
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D VI + G ++E P++L +++ + + S PR ++ E G I+E ++G
Sbjct: 146 SDGAVIRLARGVELEKPVHLIFIA-------ASQQAASFPRNLIQAEAGSRAVIVEHYLG 198
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ + N+V + V H LQ++ A H+
Sbjct: 199 QN-SGASLTNTVTRAQLAADAHVTHLKLQHEDEQAVHL 235
>gi|429746994|ref|ZP_19280301.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
gi|429164464|gb|EKY06597.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 380 str.
F0488]
Length = 439
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 27 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 86
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L+ GV V LL + + K FI ++ + G
Sbjct: 87 ADCYVLVFVNGYYCPEMSSKELT----GVTVTPLL---EALHKGGEAFIKKYFNVNTEKG 139
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 140 DVFTALNTTFASEGIYIEVPKGRVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 193
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N+V EV + K + + LQN SL A+ I T + Q
Sbjct: 194 AQLKVIE--VHQNLSDTATAILTNAVTEVFVAKEAFLDYYKLQNDSLTASLIDNTYISQ 250
>gi|387791804|ref|YP_006256869.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
gi|379654637|gb|AFD07693.1| FeS assembly protein SufD [Solitalea canadensis DSM 3403]
Length = 432
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
SLP L + R ++ L +P+ K+E +++T + I + + T + S
Sbjct: 19 SLPVDLANAEQRKTALSNFLEGGFPTIKNEDWKYTSVNKIVNIPYELTTTSTGSFTQKEL 78
Query: 126 AQFPSLVLIDGFIQ---NSALN--LSNLPDGVYVGSLLGVSDGIMKRVSD--FISEFQCG 178
+QFP +D + Q N N LSN P ++ +SD K +++ F + +
Sbjct: 79 SQFP-FTNLDVYYQVFINGHYNARLSNFPSTENGLTISHLSDPAAKELANKYFNTVAKND 137
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK-KLPISNPRVVVLVEE 237
F S+N D +I++ G ++ P++L +++ DS+ + P+ PR +++ E+
Sbjct: 138 SGFASLNTALTTDGTLIHLSPGKNLDKPLFLVFIA------DSRIETPLIQPRNIIVAEK 191
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
E+ ++E F+ G + NS+ EV+ G+ + ++ + + N H+ T L
Sbjct: 192 NNELQLVELFLSI-GENQSLTNSITEVLCGENAHIDYTKIHLEGDNNYHVATTQFELL 248
>gi|254428157|ref|ZP_05041864.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
gi|196194326|gb|EDX89285.1| FeS assembly protein SufD [Alcanivorax sp. DG881]
Length = 409
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 36/233 (15%)
Query: 63 SSSSLPQPLPLQKLRDSSSQ--------TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L ++ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRSGSEGDALAALEAANFPERKTERWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D P+L I N L NLPDGV + DG I+
Sbjct: 64 ------DGEISQPLPALSEHVVTINNGQLVSHNLPDGVTLSH-----DG------PAING 106
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
Q F+ N A V+ V A ++E PI+++ S S NPR+VV+
Sbjct: 107 LQTPFAFY--NSAVASQPVVLTVAANTRIEQPIHVQIQSA------SDAPAHCNPRLVVV 158
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +G E +IE + G N+V +V ++ H LQ + ++ HI
Sbjct: 159 LNQGAEAAVIEHY---HGQGEALTNAVTALVTADNAQLTHYRLQGEQASSLHI 208
>gi|58581026|ref|YP_200042.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84622943|ref|YP_450315.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577998|ref|YP_001914927.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|58425620|gb|AAW74657.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84366883|dbj|BAE68041.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188522450|gb|ACD60395.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 420
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST- 124
SL + R + L T P + E +++T ++ QP + +D +
Sbjct: 7 SLARGFSGDDTRRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAAL 66
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD- 179
D P LV ++G + +LS LPDGV + +L L SD + + F D
Sbjct: 67 DDIPSPRLVFVNGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLG---RRFDGSDE 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F +N A + V+ V G ++E P++L ++S+ G + S + R ++ + G
Sbjct: 124 VFARLNAALADEGMVVRVRDGAQIELPLHLVFVSMAGEHDLSW-----HHRHLIELRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ ++E + G+ + NSV+ V + + + H+ +Q S +A
Sbjct: 179 ALQLVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHA 222
>gi|288925322|ref|ZP_06419256.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|402307394|ref|ZP_10826417.1| FeS assembly protein SufD [Prevotella sp. MSX73]
gi|288337793|gb|EFC76145.1| FeS assembly protein SufD [Prevotella buccae D17]
gi|400378444|gb|EJP31299.1| FeS assembly protein SufD [Prevotella sp. MSX73]
Length = 448
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 28/238 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
L +RD + + +PSRK E +R+TD S + ++++ P + DV
Sbjct: 27 LNGVRDKAFEDFCRQGFPSRKVERYRYTDMSKLFEPDYGLNLNRLEIPINPYEAFKCDVP 86
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F L + LPDGV V SL V+ G+++R +++ + D
Sbjct: 87 NLSTSLYFVVNDAFY-TKQLPKTELPDGVIVDSLCRVATENPGLIERYYARMAKTE-DDA 144
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D ++YVP K++ + + +++ +VD + N RV++++E+G E
Sbjct: 145 ITALNTMLAQDGLLVYVPKNVKLDRAV--QVINILRSDVD----LMVNRRVLIILEQGAE 198
Query: 241 VGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
+ F +D ++ + V+E +G+ L L H+K T V + +
Sbjct: 199 AKFL--FCDDSADDRHFLTTQVIEAYVGENAS-----LDLYCLEETHVKNTRVSNVYI 249
>gi|418519552|ref|ZP_13085604.1| ABC transporter permease [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410704996|gb|EKQ63475.1| ABC transporter permease [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 420
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LVL+
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LP+GV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V AG ++E P++L ++ V G + L + R ++ + G + +IE +
Sbjct: 135 EGVLVRVHAGAQIELPLHLVFVGVAG----EQDLSWHH-RHLIELRAGAALQVIEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + + + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARVQAGSAHA 222
>gi|389774347|ref|ZP_10192466.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
gi|388437946|gb|EIL94701.1| FeS assembly protein SufD [Rhodanobacter spathiphylli B39]
Length = 439
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 25/254 (9%)
Query: 59 SLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ- 111
+LP S L PLP L R S ST P + E +++T + +
Sbjct: 6 TLPLVESLLDAPLPASGIAWLDAARQESRDAFASTGLPDTRVEAWKYTALRGLAQRRFAH 65
Query: 112 -PITRPSSSLDVSTDA----QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
T ++D S A + LV ++G + L LPDG+ + L V +
Sbjct: 66 GDATASGRAVDPSLLALPGVEGARLVFVNGVFRADLSTLDALPDGLTLQPLSRVLKDDAE 125
Query: 167 -------RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
R + D F IN A D V+ V A + P+ L ++ +G
Sbjct: 126 PLRFGWSRSATRAEAHGAADAFARINAASAADGMVLRVAARATIAAPVQLVFIGADG--- 182
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+L + R ++ + EG + +IE+ +G +G A V ++ +G G K+ H LQN
Sbjct: 183 -EGELAW-HARNLIELGEGASLTLIEQHLG-DGGQAQLATFVSDIHVGAGAKLHHVTLQN 239
Query: 280 QSLNAAHIKWTAVR 293
+ A I+ + +R
Sbjct: 240 AASAANLIRHSHLR 253
>gi|352101432|ref|ZP_08958738.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
gi|350600598|gb|EHA16662.1| Fe-S cluster assembly protein SufD [Halomonas sp. HAL1]
Length = 446
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 14/244 (5%)
Query: 58 DSLPSSSSSL-PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
D+L + SSS +P + R + + + +P+R+DE +++TD I
Sbjct: 9 DTLKARSSSYTAEPTWIAARRQAGAARFEALGFPTRRDEEWKYTDVRSIAQGNFALADNA 68
Query: 117 SSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
S + P L +DG ++ ++ +LP V V L + V +
Sbjct: 69 EFSQASAAALTLPIDAYRLTFVDGVFSSALSDVDSLPSSVQVLPLSKALAENHEAVGGPL 128
Query: 173 SEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
D F ++N + V+ + G VE PI L++LS G V + +PR
Sbjct: 129 GRLTGVDFSPFAALNTAFMEEGAVVRIAPGTVVEKPILLQFLSRAGQPV------MCHPR 182
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V+V E +IE + G E + N V E+++ +G + H LQ L H+
Sbjct: 183 VLVEAGSRSEATLIEHYTG-ESEATNFTNVVGELMLDRGAILAHYKLQEAPLGDMHVASI 241
Query: 291 AVRQ 294
V Q
Sbjct: 242 HVEQ 245
>gi|154244044|ref|YP_001415002.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
gi|154158129|gb|ABS65345.1| FeS assembly protein SufD [Xanthobacter autotrophicus Py2]
Length = 446
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 25/246 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ ++ ++LP + R ++ T P R+ E +R+TD + + +P+
Sbjct: 19 ALAETFAAARTALPGGADVAAQRAAAFDTFADVGLPHRRVEAWRYTDLRALMR-EARPLA 77
Query: 115 RPSSSLDVSTDAQ---------FPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSD 162
P + + A F LV+++G +L+ L G+ + S+ L D
Sbjct: 78 APPDAEAKAAAATAGAMLAGLGFRRLVVVNGAFVPELSDLAGLEAGLSIRSMADALTNGD 137
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ ++ ++ D ++N D V++V AG +E P+ L + V ++
Sbjct: 138 ALTGQLGQTVA---SSDAVLALNTALMGDGVVLHVAAGAVIERPVELVF-------VTTQ 187
Query: 223 KLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
P+S R +V+VEEG + +IE G G Y N+ LE+V+G G V + +
Sbjct: 188 TTPVSMFTRSLVVVEEGASLTLIESHEGPAGV-AYQVNTALELVVGAGANVERVKITAEG 246
Query: 282 LNAAHI 287
+A H+
Sbjct: 247 SDAVHL 252
>gi|119945238|ref|YP_942918.1| FeS assembly protein SufD [Psychromonas ingrahamii 37]
gi|119863842|gb|ABM03319.1| Iron-regulated ABC transporter permease protein SufD [Psychromonas
ingrahamii 37]
Length = 475
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 110/248 (44%), Gaps = 32/248 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI----QPITRPSSSLDVS-TDAQ 127
L LR+S+ + + +PS KDE +++T+T ++ ++ Q I P+ SL ++ Q
Sbjct: 26 LNDLRESAIKNFAAQGFPSPKDESWKYTNTKKLQQTEYCLAQQSIIPPTDSLTAQISEQQ 85
Query: 128 F----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
F +V I+G + + LP G+ + S ++ + E F
Sbjct: 86 FCPDEHRMVFINGTYHHDLSSNPPLPKGIILSSFAQALQDHPILIASTLGEMVNHQTHPF 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N D ++ ++ PI+ ++S + K + PR++++++ ++
Sbjct: 146 SALNSAFMSDGLFLWAAENSQMAPPIHCLFISTT-----TAKTVVCYPRLLLVLKNKTQL 200
Query: 242 GIIEEFV---------------GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+IE ++ G GN N+V E+ +G ++ H LQ +SLN++H
Sbjct: 201 TLIEHYIDLCSPRSDPDMTAANGTSGNP-NLINAVTEIHLGSEAQLDHYKLQRESLNSSH 259
Query: 287 IKWTAVRQ 294
I V+Q
Sbjct: 260 IAAMYVQQ 267
>gi|347756366|ref|YP_004863929.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
gi|347588883|gb|AEP13412.1| FeS assembly protein SufD, group 1 [Candidatus Chloracidobacterium
thermophilum B]
Length = 440
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS-------SSLDVST 124
P ++++ + T P+ +DE +R+T+ + + +P T S +
Sbjct: 27 PYGRVQEDAFATFERLGLPTVRDEAWRYTNLAPLTKRSFRPATADGLMAANLQSGIAFFD 86
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
++ +V ++G Q + +LS LP GV + L DG S F+ +L +
Sbjct: 87 ESATTRMVFVNGAFQAALSDLSGLPAGVEIRRL----DGPAPLPEADASSFRALNLAFLS 142
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
+G+ I V G V PI L +++ D ++ ++PRV++ ++E ++
Sbjct: 143 DGV------TIRVARGRAVAAPIGLFFVTAP---TDDDRM--THPRVIIELDEAAIATVV 191
Query: 245 E------EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
E + G+ G Y N+V +V +G+G + H +Q + A HI
Sbjct: 192 EIHTVLCDEEGRFGTHPYLTNAVTDVRLGQGANLTHIKVQTEGSAAYHI 240
>gi|146340501|ref|YP_001205549.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
gi|146193307|emb|CAL77323.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 278]
Length = 440
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 24/246 (9%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + ++R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVVEIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLD---------VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
P ++ +S D LVL+DG + +L+ LP GV V +L V
Sbjct: 69 PLAGAPDAAALARAKAAIAPISIDGA-AKLVLVDGVVAAELSDLAALPAGVGVRTLRAVL 127
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
D + + D S+N A D V+ V G ++ P++L +++ S
Sbjct: 128 DEASNEAIGDLLLTKVSDPMLSLNAALATDGVVVTVADGAQLTEPLHLIHVATA-----S 182
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
K S R V V +G ++E + EG Y AN + +G G ++ H L +
Sbjct: 183 KAARYS--RSHVKVGQGARATLVETSIAAEGVAAYQANDAAVIWVGDGAQLSHIRLMRDA 240
Query: 282 LNAAHI 287
+A ++
Sbjct: 241 ADAVNV 246
>gi|315606717|ref|ZP_07881727.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
gi|315251572|gb|EFU31551.1| FeS assembly protein SufD [Prevotella buccae ATCC 33574]
Length = 448
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 28/238 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
L +RD + + +PSRK E +R+TD S + ++++ P + DV
Sbjct: 27 LNGVRDKAFEDFCRQGFPSRKVERYRYTDMSKLFEPDYGLNLNRLEIPINPYEAFKCDVP 86
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F L + LPDGV V SL V+ G+++R +++ + D
Sbjct: 87 NLSTSLYFVVNDAFY-TKQLPKTELPDGVIVDSLCRVATENPGLIERYYARMAKTE-DDS 144
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D ++YVP K++ + + +++ +VD + N RV++++E+G E
Sbjct: 145 ITALNTMLAQDGLLVYVPKNVKLDRAV--QVINILRSDVD----LMVNRRVLIILEQGAE 198
Query: 241 VGIIEEFVGKEGNDCYWANS-VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
+ F +D ++ + V+E +G+ L L H+K T V + +
Sbjct: 199 AKFL--FCDDSADDRHFLTTQVIEAYVGENAS-----LDLYCLEETHVKNTRVSNVYI 249
>gi|384418461|ref|YP_005627821.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461375|gb|AEQ95654.1| FeS assembly protein SufD [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLI 134
R + L T P + E +++T ++ QP + +D + PS LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALEDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAP 190
+G + +LS LPDGV + +L L SD + + F D +F +N A
Sbjct: 78 NGRPSEALSDLSTLPDGVQLDTLSASLAASDDAQQLLG---RRFDGSDEVFARLNAALAD 134
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+ ++ V G ++E P++L ++S+ G + S + R ++ + G + ++E +
Sbjct: 135 EGMLVRVRDGAQIELPLHLVFVSMAGEHDLSW-----HHRHLIQLRAGAALQLVEHHL-H 188
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
G+ + NSV+ V + + + H+ +Q S +A
Sbjct: 189 VGDAAHLENSVMHVHLAQDAALSHARMQANSAHA 222
>gi|430746002|ref|YP_007205131.1| FeS assembly protein SufD [Singulisphaera acidiphila DSM 18658]
gi|430017722|gb|AGA29436.1| FeS assembly protein SufD [Singulisphaera acidiphila DSM 18658]
Length = 452
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 25/234 (10%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP--ITRPSSSLDVSTDA 126
+P LQ R + + S P P+ +DE +R TD +K P + PS+ + D
Sbjct: 30 EPKWLQDRRREAFEYFRSNPLPTSRDEEWRRTDIRALKLDAFAPPALQEPSAEARAAIDP 89
Query: 127 QFPSLV--LIDGFIQNSAL-----NLSNLPDGVYVGSLLGVSDG--IMKR--VSDFISEF 175
+ +L G Q +A + + L + V V D ++KR ++D +S
Sbjct: 90 VWKTLSTHYATGIEQVNATVTRRADPAKLGGAILVDLAQAVKDHPELLKRWLLTDVVSPR 149
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGNVDSKKLPISNPRVVVL 234
+ D F +++ ++YVP G KVE P++ L L+ EG + +++
Sbjct: 150 E--DAFSALHAAFWTGGTLLYVPKGVKVEAPLFSLVGLAREG--------QVDFDHTLIV 199
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWAN-SVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+E+G E + E G+E D + +E+++G+ K+R +QN H
Sbjct: 200 LEDGAEASFVRETTGRERADAPGLHVGAVELIVGREAKLRFVNIQNWDAGTWHF 253
>gi|282879388|ref|ZP_06288131.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
gi|281298501|gb|EFA90927.1| FeS assembly protein SufD [Prevotella buccalis ATCC 35310]
Length = 447
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTD 125
+ +RD++ + +PSRK E +R+TD + + +++ +P + S
Sbjct: 27 MNDVRDAAFEDFKRQGFPSRKVERYRYTDMAALFEPNYGLNLNRLDIPVKPYEAFKCSVP 86
Query: 126 AQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
SL I D F AL + LP+GV V SL V++ + VS + ++ D
Sbjct: 87 NLSTSLYFIVNDAF-HAKALPKATLPEGVIVDSLQKVANTHPQLVSKYYAQLAETKDDAI 145
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D IYVP K++ + + +++ +VD + N RV+++++EG E
Sbjct: 146 TALNTMLAQDGLFIYVPKRVKIDRAV--QVVNLLRSDVD----LMVNRRVLIVLDEGAEA 199
Query: 242 GIIEEFVGKEGNDCYW-ANSVLEVVIGKGG 270
+ F +D ++ A V+E +G+
Sbjct: 200 KFL--FCDHTMDDKHFLATQVIEAYVGENA 227
>gi|315225486|ref|ZP_07867299.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|420159751|ref|ZP_14666549.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
gi|314944584|gb|EFS96620.1| FeS assembly protein SufD [Capnocytophaga ochracea F0287]
gi|394761802|gb|EJF44130.1| FeS assembly protein SufD [Capnocytophaga ochracea str. Holt 25]
Length = 433
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L GV V LL + + K FI ++ + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKELI----GVTVTPLL---EALHKGGEAFIKKYFNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N+V EV + K + + LQN SL A+ I T + Q
Sbjct: 188 AQLKVIE--VHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|336172315|ref|YP_004579453.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
gi|334726887|gb|AEH01025.1| FeS assembly protein SufD [Lacinutrix sp. 5H-3-7-4]
Length = 437
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + +++ P+ +R + +T +T +PS+K+E +++T I
Sbjct: 1 MDLKEKLVSSFLAFENTIDVESPVHDIRTEAIKTFETTGFPSKKEEAWKYTSLKNILKED 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ ++L+ D ++ IDG + ++++ DG+ V + +
Sbjct: 61 YSVFPKQENALEYKDIKKYFIHDIDTYKIIFIDGKYSSHLSHVTH--DGIDVCLMSSALN 118
Query: 163 GIMKR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
R + ++ ++ D ++N + + I++P VE PI + + S GN
Sbjct: 119 KPKYRPVIENYFNKIATKDSLSALNTAFSNEGAYIHIPKNKLVEKPIQIIHFST--GNEA 176
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++V+E V IIE N NSV E+ K V + +QN
Sbjct: 177 ALMLQ---PRNLIVVDENSHVQIIERHQSLTENPV-LTNSVTEIYGNKRAIVDYYKIQND 232
Query: 281 SLNAAHIKWTAVRQ 294
+ NA+ I T V Q
Sbjct: 233 NKNASLIDNTYVDQ 246
>gi|294507395|ref|YP_003571453.1| FeS assembly protein SufD [Salinibacter ruber M8]
gi|294343723|emb|CBH24501.1| FeS assembly protein SufD [Salinibacter ruber M8]
Length = 487
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 133/304 (43%), Gaps = 52/304 (17%)
Query: 16 RNPK-LTPKRRAKPNKIRVSLQTTF-----PQATFSDPFVIQLAESLEDSLPSSSSSLPQ 69
R P+ L P R P R ++ T P+ F F + ++L +++S+ Q
Sbjct: 23 RGPRPLAPPRFCSPTD-RSTMTTALDTDVRPEDRFISAFEVNHGQALN----GTNASIAQ 77
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSS--------SLD 121
R+ + + P+ E +++T+ S + I RP + SLD
Sbjct: 78 Q------REDAIERFAQLGIPTNDLEAWKYTNIS-------KTIDRPYTLSLSPEGPSLD 124
Query: 122 VSTDAQFP-------SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDF 171
S A F +VL++G + S ++ +LP GV + SL + I++
Sbjct: 125 PSDIAPFTIDEMDAHRVVLVNGHVDESLSDIGDLPSGVVLSSLAQAGEEHPDIVEEHYGQ 184
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
++F+ + ++N D IYVP+G VE PI+ +L + G S+ L + PR
Sbjct: 185 YADFE-DEALTALNTAFVQDGAFIYVPSGTIVEKPIF--FLHITAG---SEPLFL-QPRH 237
Query: 232 VVLVEEGGEVGIIE-EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+ +VE+G ++E + E + N+V E +G+ + H +Q++ NA+ +
Sbjct: 238 LFVVEDGAIAKVVEAQHSVTEAQT--FTNTVSEAFVGERANLEHYLVQDEGANASQVHTR 295
Query: 291 AVRQ 294
A +Q
Sbjct: 296 AGQQ 299
>gi|410694648|ref|YP_003625270.1| putative Protein sufD [Thiomonas sp. 3As]
gi|294341073|emb|CAZ89470.1| putative Protein sufD [Thiomonas sp. 3As]
Length = 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLD 121
S + + +P + R + + LL + P+R E +++T + + + T P++ LD
Sbjct: 14 SGAYAAAEPAWCAQARHQAREDLLRSGLPTRHTEDWKYTSLRALDAIDL-ATTAPTALLD 72
Query: 122 VST--DA------QFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSD 170
DA P LV +DG +LS+LP GV + G+ L + V D
Sbjct: 73 GEALRDAGALLVGDGPRLVFVDGAFDAELSHLSDLPPGVSLAPWGAGLSHNATASGAVLD 132
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
+ G F +IN + A D + + G + P+ + L G S+ R
Sbjct: 133 AAAR---GGAFEAINRLFARDGMALELADGVCLAAPVVVIALQTRAG--------ASHLR 181
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
V+ + +G +IE+ +G Y + SV + +G + H LQ++S A H+
Sbjct: 182 HVLRLGQGSWARVIEQHIGLAQMVPYLSTSVTRAELARGATLAHVRLQDESGAAVHVSQL 241
Query: 291 AVRQ 294
V Q
Sbjct: 242 HVAQ 245
>gi|149278439|ref|ZP_01884576.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
gi|149230809|gb|EDM36191.1| iron-regulated ABC transporter, membrane-spanning permease
[Pedobacter sp. BAL39]
Length = 435
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDA-Q 127
+ L LR S T +P+ K E +++T+ S + K QI P T +SL + + Q
Sbjct: 20 VHLAALRAGSFGTFDQKGFPTTKLEEWKYTNISSLFDKEYQISPFTDNPASLAAAIEEIQ 79
Query: 128 FPS------LVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISE--FQCG 178
P L ++G + S + + + + V LL S G + + + E
Sbjct: 80 LPEHTNANVLYFVNGRYEPSLSIIRSTIEELQVMPLLQAASAGFQEIIDQHLGESSVYLK 139
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEE 237
D ++N D I+V AG ++ +P+Y+ +L+ D++ I + PR +V V +
Sbjct: 140 DGIHALNTSFITDAVFIHVAAGKELSHPVYIYHLA------DAQHQAILTQPRSLVYVSK 193
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ I E F D + +N+V+EVV+ + + + LQN + + + + T + Q
Sbjct: 194 RAKIQIAETFRTVGTMDSF-SNAVMEVVVAQDAFLEYYKLQNDAAHTSQVSSTHIHQ 249
>gi|335419037|ref|ZP_08550095.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
gi|334897172|gb|EGM35308.1| FeS assembly protein SufD [Salinisphaera shabanensis E1L3A]
Length = 442
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D ++ + A +E LP S ++ Q+ R + + T +P + E +++T +
Sbjct: 9 DHYLAEYAR-IERDLPGSDAN-------QRARKDALKAFTDTGFPDTRQEDWKYTSLRPL 60
Query: 106 K------SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG 159
+ SS+ ++ + + D + +V++DG L LP+GV V S
Sbjct: 61 EKRRFEISSEAGDVSEKELAAFLPADLEAYRIVIVDGHFSPRLSALDGLPEGVVVQSFAE 120
Query: 160 -VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ + RV E Q G L +N A D ++V A + PI++ LS GG+
Sbjct: 121 YLRNNDDARVKASAIESQPGSL-SDMNAAFATDGAYVHVAANAAADKPIHVITLS-SGGH 178
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ +S R +++ + +IE +VG G+ Y+ N V E V+G+ ++ +Q
Sbjct: 179 EER----MSQLRHRYVMDPSSQATVIEHYVGL-GDKPYFTNVVTEAVMGQNAQLTRCRVQ 233
Query: 279 NQSLNAAH 286
+S H
Sbjct: 234 QESDRGYH 241
>gi|261881039|ref|ZP_06007466.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
gi|270332221|gb|EFA43007.1| Fe-S cluster assembly protein SufD [Prevotella bergensis DSM 17361]
Length = 453
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 45/266 (16%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S+ I L E L SS+ PL +RD + + P+RK E +++TD
Sbjct: 3 SEKQYIDLYEQARQMLFEHSSA-----PLNAVRDKAFEDFKKQGLPNRKVEDYKYTDMQK 57
Query: 105 -------IKSSQIQ-PIT-RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG 155
+ +IQ PI S S DV + V+ D F + + LP+GV VG
Sbjct: 58 LFEPDYGVNLKRIQFPINPYQSFSCDVPNLSTSLYFVVNDQFY-SKVHPKTTLPEGVIVG 116
Query: 156 SLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
SL ++ + ++ + ++ GD ++N M A D +YVP K++ I + ++
Sbjct: 117 SLKEQAERNPELITKYYAKLAKTNGDPLTALNTMLAQDGLFVYVPKNVKMDRAI--QVVN 174
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVG-----------------IIEEFVGKEGN-DC 255
+ +VD + N RV+++VEEG EV +IE FVG+ + D
Sbjct: 175 ILRSDVD----LMVNRRVLIIVEEGAEVKFLFCDDSADDRNFLGTQVIEAFVGENASLDL 230
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQS 281
Y LE K ++ + Y+ Q+
Sbjct: 231 Y----CLEATHHKNVRISNVYIDQQA 252
>gi|337741244|ref|YP_004632972.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|386030260|ref|YP_005951035.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336095328|gb|AEI03154.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM4]
gi|336098908|gb|AEI06731.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 436
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 16 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 75
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 76 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 132
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPIS 227
D + D S NG A D ++ V G +E P+Y+ +++ +V K+ I
Sbjct: 133 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 192
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V LV E FV G Y + +++ +G +++H L + +AA+I
Sbjct: 193 KKACVTLV---------ESFVAA-GATAYQVHDQVDISVGDDSELQHIRLMEDARDAANI 242
Query: 288 KWTA 291
A
Sbjct: 243 TTAA 246
>gi|209885129|ref|YP_002288986.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
gi|209873325|gb|ACI93121.1| FeS assembly protein SufD [Oligotropha carboxidovorans OM5]
Length = 439
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS-SQIQPITR 115
D ++ LP P+ R ++ + S P R+ E +++TD +++++ + + P+
Sbjct: 19 DVFAAARDRLPGEGPVATARKAAFEDFTSRGLPHRRIEEWKYTDLRALLRAVAPLAPVPG 78
Query: 116 PSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
++ + L L+DG + +L+ LP GV V SL + +
Sbjct: 79 DAALALAAKAQAAIGIENATRLTLVDGVLAPKLSDLALLPKGVRVRSL---RESLAAGAV 135
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV--EGGNVDSKKLPIS 227
D + D S NG A D ++ V G +E P+Y+ +++ +V K+ I
Sbjct: 136 DLLKTTFAADAMISFNGAMATDGVLVEVDDGVILERPLYIAHVATASSASSVTRSKIAIG 195
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V LV E FV G Y + +++ +G +++H L + +AA+I
Sbjct: 196 KKACVTLV---------ESFVAA-GATAYQVHDQVDISVGDDSELQHIRLMEDARDAANI 245
Query: 288 KWTA 291
A
Sbjct: 246 TTAA 249
>gi|305665682|ref|YP_003861969.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
gi|88710440|gb|EAR02672.1| FeS assembly protein SufD [Maribacter sp. HTCC2170]
Length = 438
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+KDE +++T ++
Sbjct: 3 LKDKLVSSFMAFENKVDVEHPVHDIRSEAIKNFEEKGFPSKKDEAWKYTSLKGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDG 163
+ ++L+ +F +V IDG I +S L+ DGV + + ++
Sbjct: 63 IFPKEVNALEYKDVKKFFLHEIESYKIVFIDG-IYSSFLS-ETTHDGVDICLMSAALTKP 120
Query: 164 IMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ K+V D + ++ D ++N + + IY+P + PI + Y S GN S
Sbjct: 121 MYKQVIDVYFNKIASKDETLTTLNTAFSREGAYIYIPKNKMPKKPIEILYFST--GNEAS 178
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +V+VEE EV IIE N+ N+V E+ + + + +QN S
Sbjct: 179 LMLQ---PRSLVVVEENAEVQIIERHQSLTSNEV-LTNAVTEIFAAENSIIDYYKVQNDS 234
Query: 282 LNAAHIKWTAVRQ 294
A+ I T + Q
Sbjct: 235 KTASLIDNTYINQ 247
>gi|297622510|ref|YP_003703944.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
gi|297163690|gb|ADI13401.1| FeS assembly protein SufD [Truepera radiovictrix DSM 17093]
Length = 437
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 101/232 (43%), Gaps = 27/232 (11%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P L R ++ +T + PWP+ +DE +R+T + ++ +T P D + +
Sbjct: 21 EPAWLASERRAAWRTFEALPWPTNRDEAWRYTQLERFSLAGLELVTAPR---DRAVSERI 77
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSIN 185
++ + D + + + + +Y S L + I + + E + L+ +N
Sbjct: 78 -TMRITDSDAEGALVYKGG--EAIYRDSKLKEAGVIFTDLRTALKEHEALVRAHLYSVVN 134
Query: 186 GMGAPDLGV----------IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
+ + ++VP +V+ P+ + + GG ++ PR ++++
Sbjct: 135 ATQSKYAALSAALWQNGTFLFVPKNTEVKLPLGAFHTADAGG--------LTAPRTLIVL 186
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
E I+E+ E + +A+ +E+++ G K+R+ LQN S AH+
Sbjct: 187 EPNAHATFIDEYTSDEFGERLFASGSVEIILQDGAKLRYVSLQNWSRTVAHV 238
>gi|325919611|ref|ZP_08181623.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
gi|325549947|gb|EGD20789.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
gardneri ATCC 19865]
Length = 420
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 15/225 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
SL + +R + L T P + E +++T + +S Q P+ V
Sbjct: 7 SLARGFCGNDVRRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQTAPLVPTLVDASVL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD- 179
D P LV ++G ++ +LS LPDGV + +L L SD + + F+ D
Sbjct: 67 DDIASPRLVFVNGRPSDALSDLSTLPDGVQLETLSASLAASDDAQQLLG---RRFEGSDE 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F IN A + ++ V G +++ P+ L ++SV G + S + R ++ + G
Sbjct: 124 IFARINAALADEGVLVRVQEGAQIDIPLQLVFISVAGEHDLSW-----HHRHLIELRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ ++E + G+ + NS++ V + + + H+ +Q S +A
Sbjct: 179 ALNVVEHHL-HVGDAAHLDNSLMHVHLAQDAVLSHARVQADSAHA 222
>gi|365859211|ref|ZP_09399085.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
gi|363712921|gb|EHL96588.1| FeS assembly protein SufD [Acetobacteraceae bacterium AT-5844]
Length = 424
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 89 WPSRKDEPFRFTDTSMI-KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSN 147
+P+RK E + FTD M+ +S+ + +T S+++ V +DG + +LS
Sbjct: 47 FPTRKIEAWHFTDLGMMARSAFTEALTPVDGSVELPASHASRRAVFVDGRFRE---DLSE 103
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENP 206
P +G+ L ++G++ V+ + D+ ++N M D +I +PAG E+
Sbjct: 104 TPV-QSLGANLSAAEGLLGSVA------RVDDVPLAALNTMLFEDGALIDLPAG---EDG 153
Query: 207 IYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
++ LS+ +++ PI+ +PR V+ + +G + +IE +G+ G Y N V+E+V
Sbjct: 154 GTIELLSI----IEANDRPIAVHPRHVIRLGKGATLVLIERAIGR-GEGRYLHNPVVEIV 208
Query: 266 IGKGGKVRHSYLQNQ 280
+ +G + H+ +Q +
Sbjct: 209 LEEGAHLTHARIQQE 223
>gi|288928614|ref|ZP_06422460.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329598|gb|EFC68183.1| FeS assembly protein SufD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSS-----SLDVSTDAQ 127
R+++ + +P+RK E +++TD S + +Q + P + S DV +
Sbjct: 30 REAAFEDFKRLGFPTRKTEEYKYTDISKLFEPDFGLNLQRLPMPINPYEVFSCDVPHLST 89
Query: 128 FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGDLF 181
V+ D F+Q +A + LPDGV + SL ++ + DFI+ + GD
Sbjct: 90 ANHFVVNDAFLQPTAPH-KQLPDGVVITSLCQYAE----KNPDFIARYYGKLAATSGDAV 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N M A D ++YVP G K+ I + +++ VD + N RV+++VE E
Sbjct: 145 TALNTMLAQDGLLVYVPRGVKLGQTI--QVINILHAQVD----LMVNRRVLIIVEPQAEA 198
Query: 242 GIIEEFVGKEGNDC-YWANSVLEVVIGKGGKV 272
+ F +D + A V+E +G ++
Sbjct: 199 KFL--FCDHTFDDQRFLATQVIEAFVGDNARL 228
>gi|392398274|ref|YP_006434875.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
gi|390529352|gb|AFM05082.1| Iron-regulated ABC transporter permease protein SufD [Flexibacter
litoralis DSM 6794]
Length = 441
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 36/269 (13%)
Query: 41 QATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT 100
++TF PF +LAE + +++ + +L + L+ + + +P+ ++E ++FT
Sbjct: 9 KSTFLAPFE-ELAEQVSENINTDKLTLAKKTALEAIEEK--------EFPTTRNEEWKFT 59
Query: 101 DTSMIKSSQIQPITRP---SSSLDVS-------TDAQFPS--LVLIDGFIQNSALNLSNL 148
D + S+ + ++ +S+LD++ ++ + S LV I+G+ ++ L
Sbjct: 60 DIKSVISNNFELQSKEGSENSTLDLNELDYYLNSNKELDSHILVFINGYFSEKHSSIKAL 119
Query: 149 PDGVYVGSLLGV---SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
D + + +L + S K SD +S +F IN APD VI + ++E
Sbjct: 120 NDKISIKTLSNIEANSSIFDKFESDSVS------IFSDINTAFAPDGYVIELADNQELEL 173
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
P+++ ++ N S+K +S R + V E ++E ++ K G + N V +
Sbjct: 174 PVFVYFV-----NDASQKNTLSQVRNYISVGENSRCTVVENYITK-GENPNLVNIVTSIN 227
Query: 266 IGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ K V+H +Q + + + T +Q
Sbjct: 228 VEKYANVKHLKIQADAKSQFQVGSTHAKQ 256
>gi|317504204|ref|ZP_07962198.1| ABC superfamily ATP binding cassette transporter permease, partial
[Prevotella salivae DSM 15606]
gi|315664693|gb|EFV04366.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella salivae DSM 15606]
Length = 318
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L + D++ S+ PL +RD + + +P+RK E +++TD + + +
Sbjct: 8 IDLYQEQSDAIKRHSAE-----PLNAVRDRAFNDFKAQGFPTRKVERYKYTDMAALFAPN 62
Query: 108 -----SQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGV 160
+++ P + SL I D F L ++LP+GV + SL V
Sbjct: 63 YGLNLNRLAIPVDPYEAFKCDVPNLSTSLYFIINDTFY-TKMLPSAHLPEGVIIDSLCHV 121
Query: 161 SDGIMKRVSDFISEFQCG------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ DFI+++ D ++N M A D ++YVP K + PI + +++
Sbjct: 122 A----TEKPDFIAKYYAKLANTQEDGITALNTMLAQDGLLVYVPKNVKTDRPI--QVINM 175
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVR 273
+VD + N RV++++E+ E + F +D + + V+EV + +
Sbjct: 176 LRADVD----LMVNRRVLIIMEQNAEAKFL--FCDHAADDRRFLSTQVIEVYVDE----- 224
Query: 274 HSYLQNQSLNAAHIKWTAVRQLVV 297
+++L+ L H K T V + +
Sbjct: 225 YAHLELNCLEETHFKNTRVSNVYI 248
>gi|429756138|ref|ZP_19288749.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
gi|429171988|gb|EKY13573.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 324 str.
F0483]
Length = 433
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
+ LV ++G+ + S+ L GV V LL + + K FI ++ + G
Sbjct: 81 SDCYQLVFVNGYYCPEMSSKELI----GVTVTPLL---EALHKGGETFIKKYFNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFASEGIYIEVPKGKVVNKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE + + N+V EV + K + + LQN SL A+ I T + Q
Sbjct: 188 AQLKVIEVYQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|83814449|ref|YP_445509.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
gi|83755843|gb|ABC43956.1| FeS assembly protein SufD [Salinibacter ruber DSM 13855]
Length = 446
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 41/268 (15%)
Query: 46 DPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI 105
D F+ + +L +++S+ Q R+ + + P+ E +++T+ S
Sbjct: 13 DRFISAFEVNHGQALNGTNASIAQQ------REDAIERFAQLGIPTNDLEAWKYTNIS-- 64
Query: 106 KSSQIQPITRPSS--------SLDVSTDAQFP-------SLVLIDGFIQNSALNLSNLPD 150
+ I RP + SLD S A F +VL++G + S ++ +LP
Sbjct: 65 -----KTIDRPYTLSLSPEGPSLDPSDIAPFTIDEMDAHRVVLVNGHVDESLSDIGDLPS 119
Query: 151 GVYVGSLLGVSD---GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
GV + SL + I++ ++F+ + ++N D IYVP+G VE PI
Sbjct: 120 GVVLSSLAQAGEEHPDIVEEHYGQYADFE-DEALTALNTAFVQDGAFIYVPSGTIVEKPI 178
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE-EFVGKEGNDCYWANSVLEVVI 266
+ +L V G S+ L + PR + +VE+G ++E + E + N+V E +
Sbjct: 179 F--FLHVTAG---SEPLFLQ-PRHLFVVEDGAIAKVVEAQHSVTEAQT--FTNTVSEAFV 230
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G+ + H +Q++ NA+ + A +Q
Sbjct: 231 GERANLEHYLVQDEGANASQVHTRAGQQ 258
>gi|289671185|ref|ZP_06492260.1| FeS assembly protein SufD [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 420
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST- 124
SL + R + L T P + E +++T ++ QP + +D +
Sbjct: 7 SLARGFSGDDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAAL 66
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGV----YVGSLLGVSDGIMKRVSDFISEFQCGD 179
D P LV ++G + +LS LPDG+ + SL D R F +
Sbjct: 67 DDIPSPRLVFVNGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLRGRRFDG---SDE 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F +N A + ++ V G ++E P++L ++SV G + S + R ++ V G
Sbjct: 124 IFARLNAALADEGVLVRVRDGAQIELPLHLVFVSVTGEHDLSW-----HHRHLIEVRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+ ++E + G+ + NSV+ V + + + H+ +Q S +A + T
Sbjct: 179 ALQVVEHHL-HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRT 228
>gi|389722325|ref|ZP_10188975.1| FeS assembly protein SufD, partial [Rhodanobacter sp. 115]
gi|388442278|gb|EIL98485.1| FeS assembly protein SufD, partial [Rhodanobacter sp. 115]
Length = 332
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 26/245 (10%)
Query: 57 EDSLPSSSSSLPQPLP------LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
E ++P +S+L P P L + R + P + E +++T +
Sbjct: 3 ESAVPFVASTLAVPPPSSGIGWLDEARHENLAAFGEAGLPDTRVEAWKYTALRALSQRSF 62
Query: 111 QPITRPSSSLDVSTDA------QFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
+++ D+ +A P LV ++G + +LS LP G+ +L +S +
Sbjct: 63 IHGDAQAATRDIDPEAFALPGLDGPRLVFVNGVFRGDLSDLSALPAGL---ALRPLSQAL 119
Query: 165 MK-----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ R + + GD F +N A D V+ V AG K++ P+ L ++ V
Sbjct: 120 AQDPEPLRFALARRYKERGDAFAQLNAAQAIDGVVLRVAAGAKIDVPVRLVFVGVAADAE 179
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L R V+ + EG E+ ++E+ VG G V +VV+ G +++H+ Q+
Sbjct: 180 LAWHL-----RNVIELGEGAELTLVEQHVGS-GTARQLGTLVADVVLRDGARLQHTVAQD 233
Query: 280 QSLNA 284
S +A
Sbjct: 234 ASADA 238
>gi|110834728|ref|YP_693587.1| ABC transporter permease [Alcanivorax borkumensis SK2]
gi|110647839|emb|CAL17315.1| permease component of ABC-tranporter [Alcanivorax borkumensis SK2]
Length = 409
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 63 SSSSLPQPLPLQKL----RDSSS----QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
S+SSL Q L Q L R+ S+ L + +P RK E +++T + + I
Sbjct: 4 SASSLAQELKTQALANAQRNGSAGDALAALQAASFPERKTESWKYTSLQALADGHLNAIA 63
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D + P+L I N L NLPDGV + DG I+
Sbjct: 64 ------DGEINPPLPALSEHVVTINNGKLVDHNLPDGVTLSH-----DG------PAING 106
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
Q F+ N A V+ V A ++E PI+++ + S NPR+VV+
Sbjct: 107 LQTPFAFY--NSAVASQPIVLTVAANTRIEQPIHVQIQAA------SDTPAHCNPRLVVV 158
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +G E +IE + N+V ++ ++ H LQ + + HI
Sbjct: 159 LNQGAEAAVIEHY---HAQGKALTNAVTALITADNAQLTHYRLQGEQASTIHI 208
>gi|188583648|ref|YP_001927093.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
gi|179347146|gb|ACB82558.1| FeS assembly protein SufD [Methylobacterium populi BJ001]
Length = 440
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 26/231 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS--------LDVSTDAQF 128
R+ + + +T PSR+ E F++TD + P PS + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGAAGFAEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + + +L +P+GV V L L D +K ++ + + E + +
Sbjct: 94 ARLTFVNGHLVAALSDLDRIPEGVTVTPLNAALAAGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K + P++L++ V + + S RV+V + G E
Sbjct: 150 LNTAFLADGALISVAPGAKPQTPVHLRF-------VGTGETAFSTATRVLVEIGAGAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++E G G Y N L+V IG+ RH+ L + A + +VR
Sbjct: 203 LLESHEGPSGL-TYQPNDALDVRIGEEAAFRHTRLNREGDAAIALSTISVR 252
>gi|220925675|ref|YP_002500977.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
gi|219950282|gb|ACL60674.1| FeS assembly protein SufD [Methylobacterium nodulans ORS 2060]
Length = 439
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPITRPSSSLDVSTDAQ-FPS--- 130
R+ + + +T P R+ E F+++D ++ +++ P ++ + A+ F +
Sbjct: 33 REEAFRFFEATGLPHRRVEAFKYSDLRAALREAAPPAEAPTPEAARNAVMKAEGFATIEA 92
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGM 187
L ++G + + +L +P+GV V L+ F Q + + +N
Sbjct: 93 ARLTFVNGHLVPALSDLGAMPEGVEVTPLVEALTNGHPLTEQFTPVAQARENPIFQLNIA 152
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
D +I V AG KVE P++L+++ G S + R++V++EEG E+ + E
Sbjct: 153 FMADGALIRVAAGAKVERPLHLRFVGT-GAEAFS-----TATRILVVLEEGAELTLFESH 206
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G +G Y N L+ VI G +RH+ L + A + +V+
Sbjct: 207 EGPDGV-AYQPNDALDAVIADGATLRHTRLNREGREAIALSTLSVK 251
>gi|114776744|ref|ZP_01451787.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
gi|114552830|gb|EAU55261.1| FeS assembly protein SufD [Mariprofundus ferrooxydans PV-1]
Length = 416
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---------KSSQIQPITRPS---SSL 120
LQ +RD + Q + P+ +DE +++TD S I +S+ +P S + L
Sbjct: 5 LQHIRDEAWQAFEARGLPTTRDEDWKYTDISRIQALLGDQWWQSAATEPCDAASFVIAKL 64
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
D +V+++G A S+LP V V SL + ++VS+ I+ D
Sbjct: 65 DAY------RVVIVNGHFDAQA---SDLPASVSVKSLAAMIQDEPEQVSELITYRD--DA 113
Query: 181 FWS-----INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
F S N A D I VP +++ PI++ L+V G ++ R + +
Sbjct: 114 FLSNGIVAANSALASDGACICVPDNTRLDKPIHI--LNVNSGGT-------THLRTGIHI 164
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + IIE F G N+ +V + + +G ++ H LQ ++ H+ + Q
Sbjct: 165 GKQAQAEIIEHFAGNH-NNSGLTTAVTAIRLLEGARIEHYRLQMEAPKQCHLGRVEITQ 222
>gi|221632407|ref|YP_002521628.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
gi|221156953|gb|ACM06080.1| FeS assembly protein SufD [Thermomicrobium roseum DSM 5159]
Length = 445
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 29/241 (12%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--- 114
+++ S L +P L++ R ++ + TP PSR DE +R TD + Q+ P
Sbjct: 15 EAVEELSHLLDEPAWLRERRLAAWEIYERTPMPSRTDEEWRRTDIRRLPIDQVVPFAGVG 74
Query: 115 --------RPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG- 163
PS+ ++ DA S LV +D + + L+ +GV LL +
Sbjct: 75 QRVSGPDVLPSALFEILGDAALRSGLLVQVDSSVVFTQLDPQLAAEGVVFTDLLTAARDM 134
Query: 164 --IMKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIY-LKYLSVEGGN 218
+++RV F++E + F +++G +YVP G +V P+ + G
Sbjct: 135 PELLQRV--FMTEAVKPEDNKFAALHGAFWSGGTFLYVPEGVEVALPLRSFVWAETPGSA 192
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ + L ++ P G V +I+ + + A++V+E++ G+G +VR+ LQ
Sbjct: 193 IFAHTLLVAEP--------GASVVLIDTWASPTVEEPLIASNVVEIITGEGAQVRYIQLQ 244
Query: 279 N 279
+
Sbjct: 245 D 245
>gi|408490462|ref|YP_006866831.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
gi|408467737|gb|AFU68081.1| cysteine desulfurase activator complex protein SufD [Psychroflexus
torquis ATCC 700755]
Length = 437
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 21/256 (8%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + + + +R+ + + ST +P++K E +++T + +
Sbjct: 1 MELKEKLMSSYLAFEEQVDMENDIHSVRNKAIKFFESTGFPTKKMEAWKYTSLNSVLKED 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGV 160
+ ++D D ++V IDG I +S L+ + D + S L
Sbjct: 61 YSIFPKKEDAIDYKDIKKYLIHDIDTYTIVFIDG-IYSSHLSRTTHDKLDACLMSSALNK 119
Query: 161 SDG--IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
S IM + + ++ + S+N A + I +P E PI + L+ GN
Sbjct: 120 SKYKPIMDK---YFNKIVPEESMSSLNTAFAKEGAYIRIPKNVSAEKPIQI--LNFSTGN 174
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ + PR +++ EEG V IIE N NSV EV +GK +V + +Q
Sbjct: 175 ESALMIQ---PRNLIIAEEGAHVQIIERHQSLTDNPV-LTNSVTEVYVGKNAEVDYYKIQ 230
Query: 279 NQSLNAAHIKWTAVRQ 294
N ++ I T ++Q
Sbjct: 231 NDKTTSSLIDNTFIKQ 246
>gi|345881417|ref|ZP_08832937.1| FeS assembly protein SufD [Prevotella oulorum F0390]
gi|343919656|gb|EGV30400.1| FeS assembly protein SufD [Prevotella oulorum F0390]
Length = 447
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 40/244 (16%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----------IQPITRPSSSL- 120
L +RD + + +P++K E +++TD + + + + P + +
Sbjct: 26 LNAVRDEAFADFKAQGFPTKKVERYKYTDMAALFAPDYGLNLKRLPIPVDPYETFTCDVP 85
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-- 178
++ST F V+ DGF AL + LP+GV + SL + I D ++ + G
Sbjct: 86 NLSTSVYF---VVNDGFY-TQALPQNKLPEGVIIDSL----NRIAAERPDLVAPYYAGLA 137
Query: 179 ----DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ++N M A D IYVP KV+ I + +++ +V+ + N RV+++
Sbjct: 138 QTKDDAITALNTMLAQDGLFIYVPKRVKVDRTI--QVINILRADVE----LMVNRRVLLV 191
Query: 235 VEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+EEG E+ ++ F N + V+E +G+G + L+ L H+K T V
Sbjct: 192 LEEGAELKLL--FCDHAADNRRFLTTQVIEAYVGEGAQ-----LELNCLEETHLKNTRVS 244
Query: 294 QLVV 297
+ +
Sbjct: 245 NVYI 248
>gi|313680303|ref|YP_004058042.1| iron-regulated ABC transporter permease protein sufd [Oceanithermus
profundus DSM 14977]
gi|313153018|gb|ADR36869.1| Iron-regulated ABC transporter permease protein SufD [Oceanithermus
profundus DSM 14977]
Length = 441
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 37/253 (14%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS----MIKSSQIQP- 112
+SL S +P L R+ + + WP+RK+E +R+TD ++ + +P
Sbjct: 11 ESLRRRSKQRGEPAWLAAARERAWRIFERLDWPTRKNEAWRYTDLDPAWFALELEEARPA 70
Query: 113 -------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+ R +DA+ +LV DG + + L GV + L G +
Sbjct: 71 ELRQRDELPRAVRERLAESDAE-AALVFEDGRLVYAHLPAELGAKGVVLSDLAGALEDHG 129
Query: 166 KRVSDFIS-----------EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
+ V + E + L ++ G GA +YVPAG +E PI + + +
Sbjct: 130 EHVEGALYQAVTETGLQGPEDKLAALNAALWGYGA----FVYVPAGVTLEAPIGVFHYAA 185
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
G KL +S R ++++++ E IEE++ + + A E+++ G ++RH
Sbjct: 186 RPG-----KLSLS--RTLIVLDDNAEATFIEEYLSEAHARTHVATG--ELLLRPGARLRH 236
Query: 275 SYLQNQSLNAAHI 287
+ +Q H
Sbjct: 237 AGVQTWGAGVRHF 249
>gi|386361340|ref|YP_006059585.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
gi|383510367|gb|AFH39799.1| FeS assembly protein SufD [Thermus thermophilus JL-18]
Length = 431
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 49/242 (20%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPAWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLKLSRDE 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVRRRLEKTDVSGFLVFVGPDLVYAEVPEELRQKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D F + N +YVPAG +VE P+ + + +EGG
Sbjct: 133 QAVY---------------TEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGG 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S R ++ +E+ + IEE++ + + S E+V+ G ++RH+++
Sbjct: 178 KA-------SAGRSLLFLEDNAKAAYIEEYLSLDLSPTLHL-SATEMVLRPGARLRHAHV 229
Query: 278 QN 279
Q
Sbjct: 230 QT 231
>gi|332878306|ref|ZP_08446032.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332683757|gb|EGJ56628.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS-SLDVSTDAQF 128
L+ +R + +P +K E +++T S ++++ QP+ ++ S +V +
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKIEAWKYTSLSKLQATDYSLWQPVNEKATLSAEVLHEYSI 80
Query: 129 P---SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
SLV ++GF A S GV + LL + + K FIS++ + GD+
Sbjct: 81 KDCYSLVFVNGFY--CAEMSSKEIAGVTITPLL---EALHKGGEAFISKYFNTTTEKGDV 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A + I VP G V+ PI L Y + D + PR ++ V E +
Sbjct: 136 FTALNTAFASEGIYIEVPKGKVVDKPIQLLYFN------DRGETTCYQPRNIIAVGENAQ 189
Query: 241 VGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE V + ++ A N+V E+ + K + + LQN L A+ I T + Q
Sbjct: 190 LKVIE--VHQNVSNTATAILTNAVTEIFVAKEAFLDYYKLQNDRLTASLIDNTYISQ 244
>gi|420149517|ref|ZP_14656693.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394753740|gb|EJF37247.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ +PI ++ L
Sbjct: 21 LKDIRKGALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWRPIYNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCG 178
A LV ++G+ + S+ L+ GV V LL + + K FI ++ + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKELT----GVTVTPLL---EALHKGGEAFIKKYFNANTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N A + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 134 DVFTALNTAFASEGIYIEVPKGRVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N+V E + K + + LQN SL A+ I T + Q
Sbjct: 188 AQLKVIE--VHQNLSDISTAILTNAVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|402773181|ref|YP_006592718.1| FeS assembly protein SufD [Methylocystis sp. SC2]
gi|401775201|emb|CCJ08067.1| FeS assembly protein SufD [Methylocystis sp. SC2]
Length = 440
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 31/238 (13%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP------- 116
S+ PQ L KLR ++ T P+R+DE +++TD + ++P+ P
Sbjct: 28 SAGAPQ---LAKLRTAAFDAFAKTGLPNRRDEAWKYTDLRALLRD-VKPLAAPPEDSAKQ 83
Query: 117 -SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
+ + V +V + G+ +L +L G+ V SL S+ + K D +
Sbjct: 84 GARNAAVLEGVASRRVVFVGGYFVPELSDLGDLEAGLSVVSL---SEALAK--GDAAAMT 138
Query: 176 QCGDL------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
Q G++ +++N + VI + AG V+ PI L + V G + L
Sbjct: 139 QIGNVGEVDDPAFALNTAFMGEGVVIRIGAGVCVDKPIQLVF--VAGAQPATYFL----- 191
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
R +V+VE+G +IE F G+ + Y N+ EVV+ +G + + ++ A H+
Sbjct: 192 RSLVIVEKGARATLIESFEGETVQE-YHVNAATEVVLEEGASLERLKISHEGAAAMHV 248
>gi|323343779|ref|ZP_08084006.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
gi|323095598|gb|EFZ38172.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella oralis ATCC 33269]
Length = 447
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 48/248 (19%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
+ +RD + +PS+K E +++ D IQ I P L++
Sbjct: 26 MNAVRDKAFDDFQQLGFPSKKAERYKYID--------IQKIFEPDFGLNLRRLEMPLNPY 77
Query: 125 ---DAQFPSLVLIDGFIQNSAL-----NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P+L F+ N + + S LP+GV VGSL D K DFI ++
Sbjct: 78 EEFKCGVPNLDTSLYFVVNDSFYSKIRHGSPLPEGVIVGSL---RDETAKN-PDFIGKYY 133
Query: 177 CG------DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
D ++N M A D ++YVP G KV+ + + +++ ++D + N R
Sbjct: 134 SKIAKTEEDAITALNTMLAQDGLLVYVPKGVKVDRAV--QVINILRSDID----LMLNRR 187
Query: 231 VVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
V+++VEE E+ ++ F +D + A V+EV + KG L L H K
Sbjct: 188 VLIIVEEEAEIKLL--FCDDSADDRNFLATQVIEVYVAKGAS-----LDLYCLEETHHKN 240
Query: 290 TAVRQLVV 297
T V + V
Sbjct: 241 TRVSNVYV 248
>gi|228471669|ref|ZP_04056442.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
gi|228276822|gb|EEK15517.1| FeS assembly protein SufD [Capnocytophaga gingivalis ATCC 33624]
Length = 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFVEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEF-----QCGD 179
A LV ++G+ + VG+ + + + + K FI ++ + GD
Sbjct: 81 ADCYQLVFVNGYY------CPEMSSKEIVGATISPLLEALHKGGEAFIKKYFNTNTEKGD 134
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F ++N A + I VP G V+ PI L Y + D K++ PR ++ V E
Sbjct: 135 IFTALNTAFASEGIYIEVPKGKIVDKPIQLLYFN------DRKEITCYQPRNIIAVGENA 188
Query: 240 EVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N V E + K + + LQN SL A+ I T + Q
Sbjct: 189 QLKVIE--VHQNLSDTATAILTNVVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|46445825|ref|YP_007190.1| sufD [Candidatus Protochlamydia amoebophila UWE25]
gi|46399466|emb|CAF22915.1| putative sufD [Candidatus Protochlamydia amoebophila UWE25]
Length = 450
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 20/244 (8%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-----QPIT 114
L ++ Q PLQK R + L P+++ E +R+ + S + IT
Sbjct: 28 LEKHLDAINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEFPKEESIT 87
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
+ + V + Q LV I+G + NLP V + +L + +++ S+
Sbjct: 88 KDQIASLVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSK 147
Query: 175 F--QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
+ D F IN IY+P VE PI + +L G +L + PR+
Sbjct: 148 SLKEENDSFALINSALHHQGAFIYIPPKTIVETPIQILHLVQAQG-----QLLMLMPRIN 202
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK---W 289
V V EV + K N Y+ N V + ++ V ++ Q LN H++ +
Sbjct: 203 VCVGAQAEVKFVSSIHQKSMNG-YFINQVTDFLVEDQAYVHYT----QILNEEHVQAWHF 257
Query: 290 TAVR 293
AVR
Sbjct: 258 EAVR 261
>gi|289664560|ref|ZP_06486141.1| FeS assembly protein SufD [Xanthomonas campestris pv. vasculorum
NCPPB 702]
Length = 420
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 19/222 (8%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--DAQFPSLVLI 134
R + L T P + E +++T ++ QP + +D + D P LV +
Sbjct: 18 RRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPALVDAAALDDIPSPRLVFV 77
Query: 135 DGFIQNSALNLSNLPDGV----YVGSLLGVSDG--IMKRVSDFISEFQCGDLFWSINGMG 188
+G + +LS LPDG+ + SL D ++ R D E +F +N
Sbjct: 78 NGRPSEALSDLSPLPDGMQLDTFSASLAAGDDAQQLLGRRFDGSDE-----IFARLNAAL 132
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A + ++ V G ++E P++L ++SV G + S + R ++ V G + ++E +
Sbjct: 133 ADEGVLVRVRDGAQIELPLHLVFVSVTGEHDLSW-----HHRHLIEVRAGAALQVVEHHL 187
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
G+ + NSV+ V + + + H+ +Q S +A + T
Sbjct: 188 -HVGDAAHLENSVMHVHLAQDAALSHARMQANSAHATSLLRT 228
>gi|307544376|ref|YP_003896855.1| Fe-S cluster assembly protein SufD [Halomonas elongata DSM 2581]
gi|307216400|emb|CBV41670.1| K09015 Fe-S cluster assembly protein SufD [Halomonas elongata DSM
2581]
Length = 448
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------LDVSTDAQFPSLVLIDGFIQNSA 142
+P R+ E +++TD I + S L + DA L +DG +
Sbjct: 41 FPHRRVEEWKYTDVRDIARNDFVLTENADFSPAAAAALTLPLDAH--RLTFVDGVFAPAL 98
Query: 143 LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAG 200
+L +LP+GV V L + + V + D F ++N + V+ +
Sbjct: 99 SDLGSLPEGVQVLPLSRALEENHEAVGGPLGRLTGVDFSSFAALNTAFMEEGAVVRLAPR 158
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG--EVGIIEEFVGKEGNDCYWA 258
V+ PI L++LS G ++ +S+PR+ LVE GG E +IE VG E +
Sbjct: 159 TVVDKPIVLQFLSRAG-----EQDVMSHPRI--LVEAGGRSEATLIEHHVG-EAEAANFT 210
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
N V E+++ +G + H LQ L HI V Q
Sbjct: 211 NLVEEIILERGAILTHYKLQEAPLKDRHIASIHVEQ 246
>gi|406941270|gb|EKD73804.1| hypothetical protein ACD_45C00183G0020 [uncultured bacterium]
Length = 432
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSS----------QIQPITRPSSSLDVSTDAQFPSL 131
Q ++ +P+ DE +++T+ IK + Q+Q I + S D Q +
Sbjct: 36 QEFMARGFPTCSDEKWKYTE---IKENRVPNHSGRLVQLQSIAKHV----FSEDMQSIRV 88
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
V ++G + N++ LP GV + S+ L + ++K I + Q F +N
Sbjct: 89 VFVNGHFAENLSNMAALPMGVTLSSVQQALAQQEDVIKPYLTQIFDKQRFP-FAVLNSAL 147
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D + +P K+ PI+L +++ + + + NPR +++ + +V IE+ V
Sbjct: 148 MTDGIFLQIPENVKLSTPIHLLFMNTQQNDF------MINPRNIIVANKNSQVTFIEDHV 201
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G E Y+ N+V ++ V + +Q++ A H+ V Q
Sbjct: 202 G-EAAQHYFTNAVTDIYTKDNACVEYYKIQDEDSAATHVASLFVNQ 246
>gi|88799896|ref|ZP_01115468.1| Cysteine desulfurase activator SufB [Reinekea blandensis MED297]
gi|88777327|gb|EAR08530.1| Cysteine desulfurase activator SufB [Reinekea sp. MED297]
Length = 429
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 22/232 (9%)
Query: 62 SSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT---DTSMIKSSQIQPITRPSS 118
S + +P LQ+ + + TPWP+RK E +++T + I S +P T +
Sbjct: 12 SKQEAWSRPQWLQQWQQAGLDRFRETPWPTRKTEHWKYTPLKSLTGIDWSLPEPKTSVAD 71
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+ D L +++G +QN +LP GV SL+ +S+ ++ F++ +
Sbjct: 72 GIRFD-DWNAIRLNIVNGELQNPG----DLPTGV---SLVRLSECNQEQAERFLAALEAS 123
Query: 179 D---LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
LF + N D + V +V+ ++L Y++ +G +V +S+ ++ + +
Sbjct: 124 RNDFLFDTANQAFIQDAYWLNVDPNTQVQQALHLNYVT-DGDDV------LSSSQIWINL 176
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G +V ++E F E C N+ + + ++ H +L + +A HI
Sbjct: 177 GVGAQVTVVETFSAGEQGRCL-VNANTAITLADNARMTHYHLMLEEGDAHHI 227
>gi|440747410|ref|ZP_20926669.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
gi|436484330|gb|ELP40334.1| Iron-sulfur cluster assembly protein SufD [Mariniradius
saccharolyticus AK6]
Length = 425
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD-------AQF 128
LR+ S Q + P+ KDE ++FT S K Q+ P+ + VS D A F
Sbjct: 26 LREESKQIVNGKGLPAAKDEEYKFTSVSK-KLEQVITDFSPAKPIAVSKDTIKDHLWAGF 84
Query: 129 PS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSING 186
LV +G LS + + +L S+ I I++ + D F ++N
Sbjct: 85 EGSYLVFNNGIFSEE---LSAFENSGFEVQMLSESNAIALGS---IAKAE-KDPFIALNT 137
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
+ D I +P G KV++PI + + + + I +PR+++ V E E +E
Sbjct: 138 IYFEDGIQISIPRGKKVDSPILFLFFN------QANEGQIISPRILIEVAENAEATFLEH 191
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + Y++NSV E+ +G+ V +S LQN
Sbjct: 192 SISLD-EAVYFSNSVTEIKVGQNSHVHYSRLQN 223
>gi|170743212|ref|YP_001771867.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
gi|168197486|gb|ACA19433.1| FeS assembly protein SufD [Methylobacterium sp. 4-46]
Length = 439
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 26/231 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ------------PITRPSSSLDVST 124
R+ + + + P R+ E F+++D I R V
Sbjct: 33 REEAFRFFEAAGLPHRRVEAFKYSDLRAALREAAAPAEPPSPEAARTAIVRAEGFATV-- 90
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISEFQCGDL-FW 182
+ L ++G + + +L +PDGV V L+ ++DG ++F Q D +
Sbjct: 91 --EAARLTFVNGHLVPALSDLGAMPDGVEVVPLVEALTDG-HALTAEFTPVAQARDNPIY 147
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+N D +I V AG + E P++L+++ G S + R +V++E G +
Sbjct: 148 QLNTAFMADGALIRVTAGARPERPLHLRFVGT-GAEAFS-----TATRTLVVLEGGAALT 201
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++E G +G Y N L+ V+G G +RH+ L + A + +V+
Sbjct: 202 LVESHEGPDGVG-YQPNDALDAVVGDGATLRHARLNREGGGAVALSTLSVK 251
>gi|389875965|ref|YP_006369530.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
gi|388526749|gb|AFK51946.1| FeS assembly protein SufD [Tistrella mobilis KA081020-065]
Length = 449
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSINGMG 188
+ +++G + + L DGV V L RV + + GD F ++N
Sbjct: 92 IAMVNGVFSDELSAVGELADGVVVAGLSRALTTAPDRVHAVLGQVARGDRDGFAALNQAA 151
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEF 247
D + VP ++ P++L + ++ + ++P+ + PR+V+ + E +IE +
Sbjct: 152 LADGAAVLVPRAVELARPVHLLHHAL------APRMPVVAQPRIVIDLAENARATVIEHW 205
Query: 248 VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G G + N+ +E+ +G+G K+ LQ HI
Sbjct: 206 RGLAGETAF-VNATVEIRLGRGAKLTLIRLQTSGEKGFHI 244
>gi|300727479|ref|ZP_07060870.1| FeS assembly protein SufD [Prevotella bryantii B14]
gi|299775182|gb|EFI71783.1| FeS assembly protein SufD [Prevotella bryantii B14]
Length = 431
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQ 127
PL +RD + + +PS+K E +++T+ + + + P + D +
Sbjct: 9 PLNAIRDKAFEDFKKQGFPSKKVERYKYTNMDKLFEPDYGLNLNRLEIPVNPYD-AFRCD 67
Query: 128 FPSLVLIDGFIQNSALNL-----SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---D 179
P+L F+ N A + LP+GV V SL V+ + V+ + + Q D
Sbjct: 68 VPNLSTSLYFVVNDAFYTKAQPKTTLPEGVIVASLSHVAATCPELVAKYYGK-QAKTEED 126
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
++N M A D ++YVP K++ + + +++ +VD + N RV++++EEG
Sbjct: 127 AITALNTMLAQDGLMVYVPKNVKIDRAV--QVVNILRSDVD----LMINRRVLIVLEEGA 180
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
E + F +D + V+E +G+ K L+ L H+K T V + +
Sbjct: 181 EATFL--FCDDSADDRNFLTTQVIEAFVGENAK-----LELNCLEETHLKNTRVSNVYI 232
>gi|372220666|ref|ZP_09499087.1| FeS assembly protein SufD [Mesoflavibacter zeaxanthinifaciens S86]
Length = 438
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 114/255 (44%), Gaps = 18/255 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + P+ ++R + + + +PS+K+E +++T I+
Sbjct: 1 MELKDKLISSFLAFENQVDLDHPVHEVRSEAIKNFEAKGFPSKKEEAWKYTSLKSIEKVD 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ +++L+ +F +V +DG + +S L+ DGV V +
Sbjct: 61 FSIFPKETNALEYKDVKKFFLHEIDTYKIVFVDG-VYSSYLS-ETTHDGVDVCLMSAAFS 118
Query: 163 GIMKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
M + + + ++ D ++N + + IY+P PI + +L+ GN
Sbjct: 119 KPMYKEVIEKYFNKVASKDESLTTLNTAFSREGAYIYIPKSKAPRKPIQILHLAT--GNE 176
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L PR +++VEE EV IIE N+ + N+V E+ K +V + +QN
Sbjct: 177 AALML---QPRNLIVVEENAEVQIIERHQSLTTNEVF-TNAVTEIFAAKDARVDYYKVQN 232
Query: 280 QSLNAAHIKWTAVRQ 294
+ A+ + T + Q
Sbjct: 233 DAPTASLVDNTYIDQ 247
>gi|167764128|ref|ZP_02436255.1| hypothetical protein BACSTE_02511 [Bacteroides stercoris ATCC
43183]
gi|167698244|gb|EDS14823.1| FeS assembly protein SufD [Bacteroides stercoris ATCC 43183]
Length = 447
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + ++++ P SL + D F
Sbjct: 42 FPTRKTEKYKYTDVSKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMAEQRPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+EV +G+ L+ + I VRQ
Sbjct: 214 ATQVVEVFVGENATFDFYELEETHTSTVRINSLYVRQ 250
>gi|404450970|ref|ZP_11015945.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
gi|403763387|gb|EJZ24346.1| Iron-regulated ABC transporter permease protein SufD [Indibacter
alkaliphilus LW1]
Length = 424
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 76 LRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQ--FPSLVL 133
L++ + Q L T P KDE ++FT I+ + ++S D Q P
Sbjct: 25 LKEKAQQRLRETGLPGIKDEEYKFTSILRKIEKSIENFSCAAASELSEEDVQESLPQGFS 84
Query: 134 IDGFIQNSA---LNLSNLPDGVYVGSLLGVSD----GIMKRVSDFISEFQCGDLFWSING 186
D + N+ LNLS + Y +LL ++ G + ++ D F ++N
Sbjct: 85 GDYLVINNGKPELNLSKISSQHYKVTLLSEAENQTLGSIAKIEK--------DPFTALNS 136
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
D I V K+E PI++ + + + + N R+++ + E EV +E
Sbjct: 137 ASFADGLSISVDKNSKIEQPIFILLFN------KANQGEVINSRLLIEIGENAEVSFLEN 190
Query: 247 FVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ + Y+AN V+EV + +++ LQN+S NA
Sbjct: 191 TISLDER-AYFANQVVEVKASPNSQTKYAKLQNESRNA 227
>gi|387127402|ref|YP_006296007.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
gi|386274464|gb|AFI84362.1| Iron-sulfur cluster assembly protein SufD [Methylophaga sp. JAM1]
Length = 434
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 74 QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPITRPSSSLDVSTDAQF 128
+ LR+ + P RK+E +++T + + +QP + L + DA
Sbjct: 29 KSLREQAQYQFERMGLPGRKEEDWKYTSLWQLGQEEFRHRVVQPGFVETHELKLVVDAY- 87
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--FWSING 186
+V+IDG + +A +++ LP G+ +L +S I +R S+F++ + F +IN
Sbjct: 88 -RIVIIDGRVDLTASSIAQLPSGL---TLTPLSKSI-ERASEFLNRQINMEKPGFNAINT 142
Query: 187 MGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
M + I V A K++ PI L + G+ + + R V+++ +G + IE
Sbjct: 143 MLMNEGVFIEVAANTKIDKPIEL--IVANSGHTPHYAMHL---RHVIVLGKGSQATFIET 197
Query: 247 FVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ G E N + V E+ + + ++ H LQ +SL+ H+ A Q
Sbjct: 198 YAGNNEANGL--TDVVTEISLAENAELFHYKLQRESLDHYHVATMAATQ 244
>gi|319953155|ref|YP_004164422.1| iron-regulated ABC transporter permease protein sufd [Cellulophaga
algicola DSM 14237]
gi|319421815|gb|ADV48924.1| Iron-regulated ABC transporter permease protein SufD [Cellulophaga
algicola DSM 14237]
Length = 438
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 24/254 (9%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ ++R + + + +PS+KDE +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDVDHPVHEVRSEAMKNFETKGFPSKKDEAWKYTSLNGLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSL-LGVSD 162
+ ++L+ ++ +V IDG + NLS DGV + + ++
Sbjct: 63 IFPKEVNALEYREVKKYFINEIDTYKIVFIDGIFSS---NLSETTHDGVDICLMSSALNK 119
Query: 163 GIMKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ K++ D + ++ D ++N + + IY+P + PI + + + GN
Sbjct: 120 PMYKQIIDVYFNKIASKDESLTTLNTAFSKEGAYIYIPKNKMPKKPIEILHFAT--GNEA 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S L PR +++VEE EV IIE N+ N V E+ K V + +QN
Sbjct: 178 SLMLQ---PRNLIIVEEHAEVQIIERHQSLTSNEV-LTNCVTEIFAAKSAIVDYYKVQND 233
Query: 281 SLNAAHIKWTAVRQ 294
NA+ I T + Q
Sbjct: 234 DANASLIDNTYIDQ 247
>gi|299142246|ref|ZP_07035379.1| FeS assembly protein SufD [Prevotella oris C735]
gi|298576335|gb|EFI48208.1| FeS assembly protein SufD [Prevotella oris C735]
Length = 447
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQ 127
PL +RD + + +P+RK E +++TD + + S + + P + D +
Sbjct: 25 PLNAVRDRAFADFKAQGFPTRKVERYKYTDMAALFSPDYGLNLNRLAIPVNPYD-AFKCD 83
Query: 128 FPSLVLIDGFIQNSALNLSNLPD-----GVYVGSLLGVS----DGIMKRVSDFISEFQCG 178
P+L FI N + LP GV V SL ++ D I K + + +
Sbjct: 84 VPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIAAEKPDFIAKYYAQIAATHE-- 141
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D ++N M A D +YVP KV+ I + +++ +VD + N RV+V++E+G
Sbjct: 142 DAVTALNTMLAQDGLFVYVPKNVKVDRTIQI--INILRADVD----LMVNRRVLVVMEQG 195
Query: 239 GEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E ++ F +D + + V+E +G + + L+ L + + Q
Sbjct: 196 AEAKLL--FCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVRVSNVYIEQ 250
>gi|336397615|ref|ZP_08578415.1| FeS assembly protein SufD [Prevotella multisaccharivorax DSM 17128]
gi|336067351|gb|EGN55985.1| FeS assembly protein SufD [Prevotella multisaccharivorax DSM 17128]
Length = 447
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 39/269 (14%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM 104
S+ I L + L + SS++ L +RDS+ + +PSRK E +++TD
Sbjct: 3 SEKQYIDLYAQSREMLNAHSSAV-----LNGVRDSAFEDFKRQRFPSRKVERYKYTDMDK 57
Query: 105 -------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG 155
+ ++++ P S S DV + V+ D F + AL LP+GV V
Sbjct: 58 LFEPDYGVNVNRVEFPINPYSVFSCDVPNLSTSLYFVVNDTFYK-KALPKVGLPEGVEVM 116
Query: 156 SLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYL 209
SL +D DF++++ D ++N M A D I+VP KVE I
Sbjct: 117 SLKDAADVH----PDFVAKYYGKIAKTSEDAVTALNTMLAEDGLFIHVPKNIKVERAI-- 170
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGK 268
+ +++ NVD + N RV+++++EG E ++ F +D + V+E +G+
Sbjct: 171 QVVNILRSNVD----LMVNRRVLIVMDEGAEAKLL--FCDDSADDRNFLGTQVIEAYVGE 224
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
L L H K T V + +
Sbjct: 225 NAS-----LDLYCLEETHDKNTRVSNVYI 248
>gi|367477660|ref|ZP_09477007.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
gi|365270110|emb|CCD89475.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 285]
Length = 440
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 22/245 (8%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGAGKVADVRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ A LVL+DG + +L+ LP GV V +L V D
Sbjct: 69 PLAGAPDAAALAKAKAAIALVAIDGAAKLVLVDGVVAAELSDLAALPAGVTVRTLRAVLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + D S+N A D V+ V G ++ P++L +++ SK
Sbjct: 129 EASNESRGDLLLTKATDPMLSLNAALATDGVVVTVADGAQLSAPLHLIHVATT-----SK 183
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S R V V +G ++E + +G Y AN + +G G ++ H L +
Sbjct: 184 AARYS--RSHVKVGQGARATLVETSIAADGVAAYQANDTGVIWVGDGAQLSHIRLMRDAA 241
Query: 283 NAAHI 287
+A +I
Sbjct: 242 DAVNI 246
>gi|269926802|ref|YP_003323425.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
gi|269790462|gb|ACZ42603.1| FeS assembly protein SufD [Thermobaculum terrenum ATCC BAA-798]
Length = 434
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ-PITRPSSSL-D 121
S SL +P + LR + + +TP P+ +DE +R TD + Q P+ SS L +
Sbjct: 22 SESLNEPEWFRDLRLRAWEAFENTPMPTLQDEEWRRTDIRALNFDNFQVPLEASSSYLPE 81
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS--------DGIMKRVSDFIS 173
S D + +DG + S L+ S GV + L + + V D S
Sbjct: 82 SSEDHRSGFAQFVDGRLVQSWLDDSLAAKGVIMTDLSTAAREYPDLLRQYLFSVVPDAYS 141
Query: 174 EFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
+F N G GV +YVP +V+ P+ + + + S L + PR +
Sbjct: 142 KFAA-----LANAFGN---GVFVYVPNNVQVDLPVQISF------TLSSPGLAVF-PRSL 186
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSV--LEVVIGKGGKVRHSYLQNQSLNAAHI 287
V+ E G + IIE + ++ D + SV EVV G+G ++R+ +Q N H
Sbjct: 187 VVAERGSSLAIIERYYTEDWKDEPESLSVAGAEVVAGEGSQLRYVSVQELGRNFWHF 243
>gi|163853378|ref|YP_001641421.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
gi|163664983|gb|ABY32350.1| FeS assembly protein SufD [Methylobacterium extorquens PA1]
Length = 440
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 22/229 (9%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS------ 130
R+ + + +T PSR+ E F++TD + P PS + A+
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAETTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSIN 185
L ++G + S +L +P+GV V L +G D +K ++ Q + + +N
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRQ--NPIYQLN 151
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVGII 244
D +I V G K PI+L++ V + + S RV+V V E ++
Sbjct: 152 TAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFFLL 204
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
E G G Y N L+V IG RH+ L + A + +VR
Sbjct: 205 ESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVR 252
>gi|344202783|ref|YP_004787926.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
gi|343954705|gb|AEM70504.1| FeS assembly protein SufD [Muricauda ruestringensis DSM 13258]
Length = 440
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 18/255 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + L P+ + R+++ + + +P++KDE +++T ++
Sbjct: 3 MDLKEKLVSSFLAFEDGLDLDHPVHEERNNAIKNFETKGFPTKKDEAWKYTSLRGLQKVD 62
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++L+ ++ +V +DG + +S L+ DGV V + S
Sbjct: 63 FSIFPKQETTLEYKDVKKYFLHEIDTYKIVFVDG-VYSSYLS-ETTHDGVDVCLMSSAFS 120
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+ ++V + F + S+N + IY+P + PI + +L+ GN
Sbjct: 121 KPMFQQVIEVYFNKAASKDESLTSLNTAFCKEGAYIYIPKNKMPKKPIQILHLAT--GNE 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ L PR +++ E+ EV IIE GN+ + NSV E+ GK V + +QN
Sbjct: 179 AALMLQ---PRNLIVAEDNAEVQIIERHQSLTGNEVF-TNSVTEIFAGKDAIVDYYKVQN 234
Query: 280 QSLNAAHIKWTAVRQ 294
A+ + T + Q
Sbjct: 235 DESTASLVDNTYISQ 249
>gi|407700820|ref|YP_006825607.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
gi|407249967|gb|AFT79152.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Black Sea 11']
Length = 418
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N N+P G+ + SL + +S + + +F +N
Sbjct: 75 IDLVFVDGVLV-TQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD ++ RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVD------AHTRVVVKVAEGASATVIEQG 185
Query: 248 VG 249
G
Sbjct: 186 FG 187
>gi|406597511|ref|YP_006748641.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
gi|406374832|gb|AFS38087.1| cysteine desulfurase activator SufB [Alteromonas macleodii ATCC
27126]
Length = 418
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N N+P G+ + SL + +S + + +F +N
Sbjct: 75 IDLVFVDGVLV-TQVNTLNVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG +++ PI + +++ NVD ++ RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGARIDTPI--RIVNMASQNVD------AHTRVVVKVAEGASATVIEQG 185
Query: 248 VG 249
G
Sbjct: 186 FG 187
>gi|281422602|ref|ZP_06253601.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
gi|281403272|gb|EFB33952.1| FeS assembly protein SufD [Prevotella copri DSM 18205]
Length = 449
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-------KSSQIQPITRPSSSL--DVS 123
L +RD++ + +PSRK E +++TD S I ++++ P + DV
Sbjct: 28 LNAVRDAAFEDFRRLGFPSRKIERYKYTDMSAIFEPDYGLNLNRLEIPVDPYEAFRCDVP 87
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG----- 178
+ V+ D F N AL LP+GV V SL + I +FI ++
Sbjct: 88 NLSTSLYFVVNDAFY-NKALPKVELPEGVIVDSL----NKIAAENPEFIGKYYAKIAKTD 142
Query: 179 -DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D ++N A D +IYVP KVE I + +++ +VD + N RV++++E
Sbjct: 143 EDGITALNTFLAQDGLLIYVPKNVKVERTI--QVINILRSDVD----LMVNRRVLIVMEP 196
Query: 238 GGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGK-----VRHSYLQNQSLNAAHIKWTA 291
G E + F +D + A V+E +G+ + ++ +N ++ +I+ A
Sbjct: 197 GAEAKFL--FCDHAADDKNFLATQVIEAFVGENASLDLYCLEETHYKNSRVSNVYIEQQA 254
>gi|325916456|ref|ZP_08178728.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
gi|325537376|gb|EGD09100.1| Iron-regulated ABC transporter permease protein SufD [Xanthomonas
vesicatoria ATCC 35937]
Length = 420
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 15/225 (6%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST- 124
SL + R + L T P + E +++T ++ QP + LD +
Sbjct: 7 SLARGFSGDDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLLDAAVL 66
Query: 125 -DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGD- 179
D P LV ++G + ++S LPDGV + +L L D + F D
Sbjct: 67 DDIPAPRLVFVNGRPSAALSDVSTLPDGVQLDTLSAALAAGDDARHLLG---RRFDGSDA 123
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F +N A + ++ V G ++ P+++ ++ V G + S + R ++ + G
Sbjct: 124 VFARLNAALADEGVLVRVHDGAQIALPLHIVFVGVAGEHDLSW-----HYRHLIELRAGA 178
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ ++E + G+ + NSV+ V +G+ + H+ +Q S++A
Sbjct: 179 ALNVVEHHL-HVGDAAHLDNSVMHVHLGQDATLSHARVQADSVHA 222
>gi|365887511|ref|ZP_09426350.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
gi|365336882|emb|CCD98881.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3809]
Length = 440
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 22/245 (8%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + +R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGTGKVADIRREAFAAFERTGLPHRRIEEWKYTDLRALVREVL 68
Query: 111 QPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ + S LVL+DG + +L+ LP GV V +L V +
Sbjct: 69 PLAGAPDAAALARARSAIASVAIEGAAKLVLVDGVVAAELSDLAALPSGVTVRTLRAVLE 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + D S+N A D V+ V G ++ +P+ L +++ G +
Sbjct: 129 EQGNEARGDLLLTKASDPMLSLNAALATDGVVVTVADGTQLSSPVQLIHVATAG---KAA 185
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ S+ R V G ++E + EG Y AN + +G ++ H L +
Sbjct: 186 RYSRSHLR----VGHGARATLVETSIAAEGATAYQANDAAVISVGDEAQLSHIRLMRDAA 241
Query: 283 NAAHI 287
A ++
Sbjct: 242 EAVNV 246
>gi|213962936|ref|ZP_03391196.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
gi|213954593|gb|EEB65915.1| FeS assembly protein SufD [Capnocytophaga sputigena Capno]
Length = 433
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LNDIRKEALSFFAEKGFPHKKVEAWKYTSLSDLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFI-------QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
A LV ++G+ + + +S L + ++ G + +K+ F + + G
Sbjct: 81 ADCYQLVFVNGYYCPEMSSKEIAGATISPLLEALHKGG-----EAFIKKY--FNTNTEKG 133
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D+F ++N + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 134 DIFTALNTAFTSEGLYIEVPKGKVVDKPIQLLYFN------DRKETTCYQPRNIIAVGEN 187
Query: 239 GEVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N+V E + K + + LQN SL+A+ I T + Q
Sbjct: 188 AQLKVIE--VHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLSASLIDNTYISQ 244
>gi|416112189|ref|ZP_11593154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|442314164|ref|YP_007355467.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
gi|315022125|gb|EFT35154.1| FeS assembly protein SufD [Riemerella anatipestifer RA-YM]
gi|441483087|gb|AGC39773.1| hypothetical protein G148_0468 [Riemerella anatipestifer RA-CH-2]
Length = 427
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 35/256 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSS PL KL ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLVENIKTHSSS---PLSGDKL--NALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFL- 55
Query: 115 RPSSSLDVSTD---------AQFPSLVLIDGFIQNSALNLSNLPDG----VYVGSLL--G 159
P +S + F +VL++G ++ LS + D + + +L G
Sbjct: 56 -PQEEHHISEEELKALRLGGEDFDWVVLVNGKLRPE---LSKISDKDIKVLALDEVLSSG 111
Query: 160 VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGN 218
++ + + + IS F ++N + LGV +YVP VE PI++ Y+S
Sbjct: 112 ENEALFRPYFNTISNESWA--FPNLN-LAFAHLGVALYVPKNTVVEKPIHIFYIS----- 163
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ + NPR +++VE G ++ +IE + + + NS+ E+ K LQ
Sbjct: 164 QNQSENTFYNPRNILVVEAGSQIEVIESHHNFDTSFTF-TNSLTEIFTKPNAKADWHKLQ 222
Query: 279 NQSLNAAHIKWTAVRQ 294
N + + + T V+Q
Sbjct: 223 NDTDTSYLVDHTFVKQ 238
>gi|94501135|ref|ZP_01307658.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
gi|94426711|gb|EAT11696.1| FeS assembly protein SufD [Oceanobacter sp. RED65]
Length = 451
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 88 PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP-------SLVLIDGFIQN 140
P+P+RK E +++T S+ +Q Q P + DV+ F LV ++G Q
Sbjct: 44 PFPTRKTEAWKYT--SLFALTQ-QDYNHPVQNTDVTGVESFEIPELDVHRLVYVNGVYQE 100
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LFWSINGMGAPDLGVIYVP 198
S L++ + G+ V + ++D + + D LF ++N D +I+V
Sbjct: 101 S-LSVIDQESGLSVVRFSDADESQKSIIADKLGQTAETDRNLFTALNNAQVNDGVLIHVA 159
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
+VE PI L ++ + P S R ++++E V +IE+F+ +
Sbjct: 160 KETQVEKPIQLVNITTQQAQ------PASAFARHLIVLERHANVKVIEQFISSDDEQNVL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N E + G K+ H + + ++ H
Sbjct: 214 LNQTSEAYVADGAKLEHYRVHTEHESSLHF 243
>gi|160331083|ref|XP_001712249.1| sufD [Hemiselmis andersenii]
gi|159765696|gb|ABW97924.1| sufD [Hemiselmis andersenii]
Length = 471
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQF-- 128
+ +LR + L +T +PS+KDE +RFT K ++ + +S +V+ D +F
Sbjct: 66 INQLRKIGNNILKNTNFPSKKDESWRFT-----KLDRLFGMKFANSDSEVNADFVKKFFL 120
Query: 129 ----PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLF 181
V ++G S D ++G +++ K++ D + + G F
Sbjct: 121 ENSQARCVFLNGVFFPSLFQARENTDSYFLGRFSDLNEKERKKIRDLAGKGESGINGGFF 180
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGE 240
+N ++ V+Y+ A K+++PI + + S + + PI N +++++ E+ +
Sbjct: 181 PILNLANLDEIAVLYIKADSKIKDPIQILFSS------STNETPICINQKLIIVCEKNSK 234
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
II+ VG ++ ++ NS +++ + ++ +L NQ
Sbjct: 235 AKIIQHHVGSNESE-FFDNSTTTILVDEEAQIDF-FLINQ 272
>gi|268317574|ref|YP_003291293.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
gi|262335108|gb|ACY48905.1| FeS assembly protein SufD [Rhodothermus marinus DSM 4252]
Length = 444
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 26/218 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQPI-TRPSSSLDVSTDAQFP 129
L LR + + +P RK E +++T ++ +I P+ P+ + D P
Sbjct: 35 LAALRRKAIERFGVLGFPGRKSEAWKYTPIAKALQHPYRIDPVPAVPALNEQALADYAIP 94
Query: 130 SL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL---- 180
L VL++G S+LP+GV + L + +R +D ++ L
Sbjct: 95 ELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGL----EEAARRHADLFEKYFAHYLDFEN 150
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A D +YVP G +E P+++ L +D+ + PR VV+ G
Sbjct: 151 EPFLALNTAFARDGFFLYVPEGTALERPVHVLNL------IDTDEELFLQPRNVVVAAPG 204
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
+ ++ + + N V EV +G+G +V H Y
Sbjct: 205 ASLKLVTSGHSRAAQRTF-TNGVTEVFVGQGAEV-HQY 240
>gi|284035108|ref|YP_003385038.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
gi|283814401|gb|ADB36239.1| FeS assembly protein SufD [Spirosoma linguale DSM 74]
Length = 441
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 20/262 (7%)
Query: 42 ATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD 101
A+++D F QL S D+ + + PL +LR ++ + +P+ + E +++++
Sbjct: 6 ASYND-FKEQLLASFRDNEERMNGE--RKSPLHQLRRAALKQFEQLGFPTIRHEEWKYSN 62
Query: 102 -TSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVG 155
S+IK T ++ D++ + P+L ++G L + + V +
Sbjct: 63 VNSLIKEDFALDATSSLTAEDLAP-LEIPNLEGNILYFVNGIYHPELSRLVSPSEQVQIT 121
Query: 156 SLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
SL + V + + F ++N A D V+ VPA VE PI L++++
Sbjct: 122 SLAEAIKADPEFVGTHFAHYADYQDSAFTALNTAMASDGVVVRVPANTTVEQPIILRFIT 181
Query: 214 VEGGNVDSKKLPI-SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
D++ I S PR ++++ + EV + E + G + N V E+V+ + ++
Sbjct: 182 ------DARVNNITSQPRNLIVIGKNAEVMMAESY-RTLGEKSSFVNVVTEIVLDRDARM 234
Query: 273 RHSYLQNQSLNAAHIKWTAVRQ 294
++ + N++ A HI T V Q
Sbjct: 235 QYYKVLNETAKAYHIGTTQVHQ 256
>gi|281424961|ref|ZP_06255874.1| FeS assembly protein SufD [Prevotella oris F0302]
gi|281400805|gb|EFB31636.1| FeS assembly protein SufD [Prevotella oris F0302]
Length = 447
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 29/239 (12%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQ 127
PL +RD + + +P+RK E +++TD + + + + + P + D +
Sbjct: 25 PLNAVRDRAFADFKAQGFPTRKVERYKYTDMAALFAPDYGLNLNRLAIPVNPYD-AFKCD 83
Query: 128 FPSLVLIDGFIQNSALNLSNLPD-----GVYVGSLLGVSDGIMKRVSDFISEFQC----- 177
P+L FI N + LP GV V SL ++ DFI+++
Sbjct: 84 VPNLSTSLYFIVNDSFYSQKLPQVQLPAGVIVDSLRHIA----AEKPDFIAKYYARIAAT 139
Query: 178 -GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D ++N M A D +YVP KV+ I + +++ +VD + N RV+V++E
Sbjct: 140 HEDAVTALNTMLAQDGLFVYVPKNVKVDRTIQI--INILRADVD----LMVNRRVLVVME 193
Query: 237 EGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+G E ++ F +D + + V+E +G + + L+ L + + Q
Sbjct: 194 QGAEAKLL--FCDHATDDRKFLSTQVIEAYVGDNASLELNCLEETHLKNVRVSNVYIEQ 250
>gi|329954148|ref|ZP_08295243.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
gi|328528125|gb|EGF55105.1| FeS assembly protein SufD [Bacteroides clarus YIT 12056]
Length = 447
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKTEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 GKALPKSHLPEGVIFGSLKDMAEQHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLACDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+E IG+ L+ + I VRQ
Sbjct: 214 ATQVVEAFIGENATFDFYELEETHTSTVRISSLYVRQ 250
>gi|319900396|ref|YP_004160124.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
gi|319415427|gb|ADV42538.1| FeS assembly protein SufD [Bacteroides helcogenes P 36-108]
Length = 447
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKQEKYKYTDVSNFFEPDYGLNLNRLELPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N L S+LP GV GSL V++ + V + + D + N A D ++YV
Sbjct: 101 NKTLPKSHLPQGVIFGSLKEVAEQNPELVRKYYGKLANTAEDGVAAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+VD + N RV++++EEG +V ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVDF----LVNRRVLIILEEGAQVRLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+E +G+ L+ + I V+Q
Sbjct: 214 ATQVIEAFVGENAVFDFYELEETHTSTVRISNLYVKQ 250
>gi|404486685|ref|ZP_11021875.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
gi|404336503|gb|EJZ62964.1| FeS assembly protein SufD [Barnesiella intestinihominis YIT 11860]
Length = 449
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 30/260 (11%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-- 107
I L S ++ + S SS++ + LR+ + L S PS KDE R TD + S
Sbjct: 8 IDLYRSQKNLINSHSSAV-----MNGLREEAVALLESRGLPSLKDEEHRRTDIESVYSPD 62
Query: 108 -----SQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
+I P DV + V+ D F + S LPDGV VGSL +
Sbjct: 63 YGLNLGRIDIEINPYEVFRCDVPNLSTLLYFVVNDSFYKRVQPVSSKLPDGVLVGSLCDM 122
Query: 161 SDGIMKRVSDFISEF--QCGDL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSV 214
S + D +S + + D+ ++N A D +Y+P G VE PI L +++
Sbjct: 123 S----LQYPDLVSRYYGKVADMKRDGTVALNTAFAQDGFFLYIPDGVIVEKPIQL--VNI 176
Query: 215 EGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
GNVD + N R++++V + + ++ E + ++ V E+ + +
Sbjct: 177 LRGNVDF----MVNRRLLIVVGKRAQAKLLVCDHSDEATVKFLSSQVCEIFVDDDAVFDY 232
Query: 275 SYLQNQSLNAAHIKWTAVRQ 294
++ S N + + VRQ
Sbjct: 233 YDIEESSENTSKVSSVFVRQ 252
>gi|410663514|ref|YP_006915885.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
gi|409025871|gb|AFU98155.1| FeS assembly protein SufD [Simiduia agarivorans SA1 = DSM 21679]
Length = 408
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
LQ R + + L WP RK E +R+T ++ S T P+ + + +V
Sbjct: 18 LQVQRARAREALSVARWPGRKVEDWRYTPVRALEKSAFVQATLPAEPAPAIGNLETLDIV 77
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDL 192
L DG + LP+GV + L SD K VS F S LF +N + A
Sbjct: 78 LRDGM----PILPEGLPEGVSIAFL---SDA--KAVSLFGSVKPERHLFGLVNDLLATTG 128
Query: 193 GVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK-E 251
I V AG +VE P+ + Y + EG V RV+V + G +IE E
Sbjct: 129 VYIEVAAGVEVERPLRVVYQAGEGEQVQQ--------RVLVKLAAGARATVIEHSESAVE 180
Query: 252 GNDCYWANSVLE 263
C +A +LE
Sbjct: 181 SFTCAYAEYLLE 192
>gi|383765395|ref|YP_005444376.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
gi|381385663|dbj|BAM02479.1| FeS cluster assembly protein SufD [Phycisphaera mikurensis NBRC
102666]
Length = 445
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 91/229 (39%), Gaps = 24/229 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRPSSSLDVSTDAQFPS- 130
L RD+ WP +++E +RFT+ + ++ + + S + Q P
Sbjct: 27 LNPFRDAGRARFKELGWPGKRNESWRFTNLDKLAATNFVSAVDDAEVSDEALASFQVPGL 86
Query: 131 ----LVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF------QCGD 179
LV +DG F + + L GV V L +++ I + D + + D
Sbjct: 87 DATLLVFVDGRFREELSDATGELEPGVLV---LPLTEAICQH-RDLVEPHLGRLTRETDD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEG 238
F ++N + + V G P+++ ++ + G P+ S+PR +++
Sbjct: 143 AFTALNNASVENGVFVRVQDGVAASKPVHVLSIATDAGE------PVASHPRGLIIAGVA 196
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V ++E V EG N+ E+ +V H +L+ A H+
Sbjct: 197 SSVTVLEHAVAVEGAGVSLTNAATEIFAADRARVEHYFLERDGREAFHV 245
>gi|160887875|ref|ZP_02068878.1| hypothetical protein BACUNI_00278 [Bacteroides uniformis ATCC 8492]
gi|317477850|ref|ZP_07937036.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|423304182|ref|ZP_17282181.1| FeS assembly protein SufD [Bacteroides uniformis CL03T00C23]
gi|423310703|ref|ZP_17288687.1| FeS assembly protein SufD [Bacteroides uniformis CL03T12C37]
gi|156862561|gb|EDO55992.1| FeS assembly protein SufD [Bacteroides uniformis ATCC 8492]
gi|316905986|gb|EFV27754.1| FeS assembly protein SufD [Bacteroides sp. 4_1_36]
gi|392680973|gb|EIY74336.1| FeS assembly protein SufD [Bacteroides uniformis CL03T12C37]
gi|392685708|gb|EIY79022.1| FeS assembly protein SufD [Bacteroides uniformis CL03T00C23]
Length = 447
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK+E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKEEKYKYTDISKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL V++ V + + D + N A D + YV
Sbjct: 101 GRALPKSHLPEGVIFGSLKEVAEKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLVCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+E+ G+ L+ + I VRQ
Sbjct: 214 ATQVIEIFAGENAIFDFYELEETHTSTVRISNMYVRQ 250
>gi|410098740|ref|ZP_11293716.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
gi|409221201|gb|EKN14152.1| FeS assembly protein SufD [Parabacteroides goldsteinii CL02T12C30]
Length = 450
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 89 WPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
+PS K E +++TD + + I + P + DV P+L F+ N
Sbjct: 45 FPSVKSEDYKYTDVAQAFAPDYGVNINRLAIPVNPYDVFR-CDVPNLSTSLYFVVNDTFY 103
Query: 145 -----LSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
++LP+GVY G L ++ + + + + D ++N M A D V+YV
Sbjct: 104 DKMMPKAHLPEGVYAGGLKNFAEQYPEVAACYYGKAAKSSHDGIIALNTMLAQDGFVLYV 163
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-Y 256
P G VE PI L +++ +VD+ ++N R++V++E E ++ +D +
Sbjct: 164 PEGVAVERPIQL--INIFRSDVDT----MANRRILVIMEPRSEAKLL--VCDHSIDDVKF 215
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+E+ G+G + L+ S++ + V+Q
Sbjct: 216 LATQVVEIFAGEGAYFDYYDLEESSISTSRFASVYVKQ 253
>gi|338530235|ref|YP_004663569.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
gi|337256331|gb|AEI62491.1| FeS assembly protein SufD [Myxococcus fulvus HW-1]
Length = 446
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 16/235 (6%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS------SSLDVS 123
P L++LR + P+ +DE ++++ I P R + SS+
Sbjct: 25 PRWLKRLRADALAHFERQGLPTTRDEAWKYSRLGAIADGTFIPAARDARDAAHLSSVVER 84
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD--LF 181
P LV +DG + +++ LP G+ + L + + + + + F
Sbjct: 85 LGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESLLGQRALSNEHAF 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N + ++ + G E P+ L +L+ G V +++PR++V+ E E
Sbjct: 145 TALNAALLEEGALLRLAPGALSEVPVQLLFLTRGDGPV------LASPRILVVAGESSEA 198
Query: 242 GIIEEFV--GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E + G G+ + N+V EV +G + H LQ ++ A H+ RQ
Sbjct: 199 TLVETYASAGPAGSSATFTNAVTEVTLGDNASLHHYKLQVEADAALHLGALHARQ 253
>gi|313206630|ref|YP_004045807.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383485936|ref|YP_005394848.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|386321386|ref|YP_006017548.1| Fe-S cluster assembly ABC transporter permease [Riemerella
anatipestifer RA-GD]
gi|312445946|gb|ADQ82301.1| FeS assembly protein SufD [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|325335929|gb|ADZ12203.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Riemerella anatipestifer RA-GD]
gi|380460621|gb|AFD56305.1| fes assembly protein sufd [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 426
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSSL + ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALERFLSKGFPSKKDEEYKYTNLKEIIEKQYQFLP 55
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK--RVSDFI 172
+ + ++ + +L L + + L +G + L +SD +K + + +
Sbjct: 56 QEEHHI---SEEELKALRLGE-----EDFDWVVLVNGKWCPELSKISDKDIKVLALEEAL 107
Query: 173 SEFQCGDLF-----------WS---INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
S + G LF W+ +N A +YVP VE PI++ Y+S
Sbjct: 108 SNGENGALFRPYFNTIANESWAFPNLNLAFAHSGVALYVPKNTVVEKPIHIFYIS----- 162
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY-WANSVLEVVIGKGGKVRHSYL 277
+ + NPR +++VE G ++ +IE +D + + NS+ E+ K L
Sbjct: 163 QNQSENTFYNPRNILVVEAGSQIEVIES--HHNFDDSFTFTNSLTEIFTKPNAKADWHKL 220
Query: 278 QNQSLNAAHIKWTAVRQ 294
QN + + + T V+Q
Sbjct: 221 QNDTDTSYLVDHTFVKQ 237
>gi|254563304|ref|YP_003070399.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
gi|254270582|emb|CAX26585.1| FeS assembly protein SufD [Methylobacterium extorquens DM4]
Length = 440
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 26/231 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST--------DAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++E G G Y N L+V IG RH+ L + A + +VR
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVR 252
>gi|429753386|ref|ZP_19286193.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
gi|429173667|gb|EKY15179.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 326 str.
F0382]
Length = 433
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG-VSDGIMKRVSDFISEF-----QCGD 179
A LV ++G+ + VG+ + + + + K FI ++ + GD
Sbjct: 81 ADCYQLVFVNGYY------CPEISSKEIVGATITPLLEALHKGGEAFIKKYFNTNTEKGD 134
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+F ++N + I VP G V+ PI L Y + D K+ PR ++ V E
Sbjct: 135 IFTALNTAFTSEGLYIEVPKGKIVDKPIQLLYFN------DRKETTCYQPRNIIAVGENA 188
Query: 240 EVGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ +IE V + +D A N+V E + K + + LQN SL A+ I T + Q
Sbjct: 189 QLKVIE--VHQNLSDTATAILTNAVTEAFVAKEAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|406899477|gb|EKD42738.1| hypothetical protein ACD_73C00038G0004 [uncultured bacterium]
Length = 436
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 119 SLDVSTDAQFPSLVLIDGFIQNS--ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
SL + + SLV+I+G + +S AL+L+ + + + + + ++K+ SE
Sbjct: 78 SLSLGNPEEAYSLVVINGRLISSLQALHLNEKIEILPLAEAVLSRETLVKKYLTLTSE-- 135
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F+ +N A D I+V +G ++ P+ + + + G N + + R VV VE
Sbjct: 136 NNDPFFDLNTALATDGLFIHVKSGFWLDKPLEIIFYTA-GENQNRGQ------RHVVYVE 188
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E + ++E + G ++CYW N+ E+V+ K + +Q +S A H V Q
Sbjct: 189 ENAGLKLVETYGG--SDECYWMNTATEIVLEKNAHLELVQIQKESAKAFHTGSVLVTQ 244
>gi|218532235|ref|YP_002423051.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
gi|218524538|gb|ACK85123.1| FeS assembly protein SufD [Methylobacterium extorquens CM4]
Length = 440
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 26/231 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPS--- 130
R+ + + +T PSR+ E F++TD + P PS + V+ F +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTTGFNAVEA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGEAAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++E G G Y N L+V IG RH+ L + A + +VR
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVR 252
>gi|114319888|ref|YP_741571.1| FeS assembly protein SufD [Alkalilimnicola ehrlichii MLHE-1]
gi|114226282|gb|ABI56081.1| Iron-regulated ABC transporter permease protein SufD
[Alkalilimnicola ehrlichii MLHE-1]
Length = 441
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV------- 122
P L+ R ++ + +P+R+ E +R ++ + +Q RP+ +L V
Sbjct: 25 PDWLEARRQAAIEAFERMGFPTRRWEAWR----NIKLDALLQHHYRPAETLGVAPQVLQE 80
Query: 123 --STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD--GIMKRVSDFISEFQCG 178
S P LV IDG LP+G+ V L D + + ++ Q
Sbjct: 81 AISVAPDAPRLVFIDGVFSPQHSTPDALPEGLTVKPLSEALDEADVQQHLAAHADYEQ-- 138
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A ++VP G VE + + + G + S PRV+V EE
Sbjct: 139 HPFIALNTAFARQGVYVHVPRGQAVEQEVLFIFACSDAGADRA-----SWPRVLVHAEES 193
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
E +IE G +G+ Y A+ V E++ VR LQ + +A H+
Sbjct: 194 AECRLIEWHGGPDGS-AYLASPVTEIIAEANANVRLDRLQREGADAFHL 241
>gi|240140794|ref|YP_002965274.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|418058018|ref|ZP_12696000.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
gi|240010771|gb|ACS41997.1| FeS assembly protein SufD [Methylobacterium extorquens AM1]
gi|373568471|gb|EHP94418.1| FeS assembly protein SufD [Methylobacterium extorquens DSM 13060]
Length = 440
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 26/231 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS--------TDAQF 128
R+ + + +T PSR+ E F++TD + P PS + + +
Sbjct: 34 REEAFRFFEATGLPSRRVEAFKYTDLRAAITEAAPPAEAPSEDAARAAVAGTAGFNEVEA 93
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVS--DFISEFQCGDLFWS 183
L ++G + S +L +P+GV V L +G D +K ++ + + E + +
Sbjct: 94 VRLTFVNGHLVASLSDLDRVPEGVTVTPLNEAMGKGDARLKLLAPVEQVRE----NPIYQ 149
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEVG 242
+N D +I V G K PI+L++ V + + S RV+V V E
Sbjct: 150 LNTAFLADGALISVAPGAKPATPIHLRF-------VGTGETAFSTATRVLVDVGAEAEFF 202
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++E G G Y N L+V IG RH+ L + A + +VR
Sbjct: 203 LLESHEGPAGL-TYQPNDALDVHIGAEAAFRHTRLNREGDAAVALSTLSVR 252
>gi|407688453|ref|YP_006803626.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291833|gb|AFT96145.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + + L + WP+R++E +RFT + ++ + +Q + P ++D +
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKREAKQAVQADSLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
LV +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 VDLVFVDGVLV-TQVNTLDVPAGMSITSLNNDDTATQQAISSVYGQVKPTRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD ++ RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGAKIDTPV--RIVNMASQNVD------AHTRVVVKVAEGASATVIEQG 185
Query: 248 VG 249
G
Sbjct: 186 FG 187
>gi|340347352|ref|ZP_08670463.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella dentalis DSM 3688]
gi|433651122|ref|YP_007277501.1| FeS assembly protein SufD [Prevotella dentalis DSM 3688]
gi|339609670|gb|EGQ14537.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella dentalis DSM 3688]
gi|433301655|gb|AGB27471.1| FeS assembly protein SufD [Prevotella dentalis DSM 3688]
Length = 447
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-------SQIQPITRPSSSLDVSTD 125
L +RD + + + P+RK E +++TD + + ++I+ P + S
Sbjct: 26 LNAVRDRAFEDFKAQGLPTRKVERYKYTDMQQLFAPDYGLNLNRIEIPINPYKAFSCSVP 85
Query: 126 AQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
SL + D F + S LP+GV VGSL ++ G +++ ++ D
Sbjct: 86 NLSTSLYFVVNDEFYRKQQTKAS-LPEGVIVGSLREAAEKNPGFIEKYYARLARTG-EDG 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D ++YVP +VE I + +++ +VD + N RV++++EEG E
Sbjct: 144 VTALNTMLAQDGLLVYVPRNVRVERAI--QVVNILRSDVD----LMVNRRVLIVMEEGAE 197
Query: 241 VGIIEEFVGKEGNDCYW-ANSVLEVVIGKGG 270
++ F +D ++ V+E +G+
Sbjct: 198 AKLL--FCDDSADDRHFLGTQVIEAYVGENA 226
>gi|429748337|ref|ZP_19281533.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
gi|429171246|gb|EKY12879.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 332 str.
F0381]
Length = 433
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYAI 80
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF-----QCGDL 180
A LV ++G+ S S GV V LL + + K FI ++ + GD+
Sbjct: 81 ADCYLLVFVNGYY--SPEMSSKAIAGVTVTPLL---EALHKGGEAFIKKYFNTNTEKGDV 135
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A + I VP G V+ PI L Y + D + PR ++ V E +
Sbjct: 136 FTALNTAFASEGVYIEVPKGKVVDKPIQLLYFN------DGAETTCYQPRNIIAVGENAQ 189
Query: 241 VGIIEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE + + ++ A N+V EV + K + + LQN L A+ I T + Q
Sbjct: 190 LKVIE--IHQNVSNTATAILTNAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQ 244
>gi|330994037|ref|ZP_08317967.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
gi|329758983|gb|EGG75497.1| FeS cluster assembly protein sufD [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
A P +V ++G + S LP GV V + ++G R+ D I GD+ ++N
Sbjct: 86 AAAPRVVFVNGHFDAAR---SRLPTGVRVSTF--AAEG---RIGDDIDP--AGDVTTALN 135
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGII 244
+ A D V+ VP G + L + V G V PIS +PR ++VE+GG + ++
Sbjct: 136 TVLAHDGLVLVVPEGVDA-GCLLLASIGVAAGGV-----PISFHPRHSIVVEKGGRLALL 189
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+ G+ Y N + ++ + GG + H+ +Q + A H+ + R
Sbjct: 190 DAAAGQ---GFYLHNPLYDITVAGGGHLSHARVQVEGQEAVHLAVSHAR 235
>gi|436835812|ref|YP_007321028.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
gi|384067225|emb|CCH00435.1| FeS assembly protein SufD [Fibrella aestuarina BUZ 2]
Length = 439
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 25/262 (9%)
Query: 43 TFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT 102
+F D V E E +S S+ Q +R S+ QT + +P+ + E +++++
Sbjct: 8 SFKDQLVAAFREGEERMNGASKSAFHQ------IRRSALQTFETLGFPTIRHEEWKYSNV 61
Query: 103 SMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNL----SNLPDGVY 153
+ + + D Q P+L ++G + + ++L +
Sbjct: 62 KAMVGQAYAFDNGTALTADELGTLQIPNLEGNILYFVNGHYRADLSQIVSPATHLQIRSF 121
Query: 154 VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+L ++ I S + ++FQ F ++N A D I VP VE P+ L++++
Sbjct: 122 AEALQTDAETIGLHFSRY-ADFQ-DSAFTALNTAFAYDGVFIRVPDNKVVEEPVILRFIT 179
Query: 214 -VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
V NV ++ PR ++++ +V I E + G+ + N V EVV+ +V
Sbjct: 180 DVRTQNVAAQ------PRNLIVIGRNADVKIAESY-RTIGDKAAFTNIVTEVVVAADARV 232
Query: 273 RHSYLQNQSLNAAHIKWTAVRQ 294
H +QN S HI T V Q
Sbjct: 233 EHYRVQNDSQQTNHICRTQVSQ 254
>gi|380511422|ref|ZP_09854829.1| iron ABC transporter permease [Xanthomonas sacchari NCPPB 4393]
Length = 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 110/237 (46%), Gaps = 30/237 (12%)
Query: 55 SLEDSLPSS-SSSLPQPLPL-QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQI 110
+L DSL ++ + PL Q LRD P + E +++T + +S
Sbjct: 3 ALLDSLAAAFHGDAARRAPLEQALRDG---------LPGTRSETWKYTSLRALERRSFAA 53
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGV---YVGSLLGVSDGIMKR 167
P + P + P LV ++G ++ +LS LP GV + ++L D M+
Sbjct: 54 APQSAPVVDAALLDGIPAPRLVFVNGRASDALSDLSGLPAGVELQRLSTILRSGDDAMR- 112
Query: 168 VSDFISE-FQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
F+ F+ D +F +N A + V+ V AG +VE P++L ++S + +
Sbjct: 113 ---FLGRRFERSDEVFARLNAALADEGSVLRVDAGVRVELPLHLVFVST------AAEAD 163
Query: 226 IS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
++ + R ++ + + + ++E + G+ + +NS+ V + G ++ H+ +Q+++
Sbjct: 164 LAWHHRHLIELRQDAALAVVEHHL-HAGDAAHLSNSLAHVHLAAGAQLTHARVQDEA 219
>gi|152995375|ref|YP_001340210.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
gi|150836299|gb|ABR70275.1| FeS assembly protein SufD [Marinomonas sp. MWYL1]
Length = 419
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS----TDAQFPSLV 132
R + + L +T WP+RK E +R+T ++ +Q + I S +D+S D LV
Sbjct: 23 RAHALELLANTKWPTRKTEAWRYTPLRPVERTQAKVI---SDKIDLSPVAIADLSAIELV 79
Query: 133 LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMG 188
++G + L LP+G+ + LG G ++ +D +S F +F +N
Sbjct: 80 FVNGQFDQAQLT-KTLPEGLSIS--LGGDLGSAQQ-ADALSVFSTIKPERHIFGLVNDAL 135
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
A D+ VI V G ++ PI + L +G S+ RV V + G + +IE+ V
Sbjct: 136 AQDVVVITVAEGVEITQPIRISSLLSQGAE--------SHTRVQVALAAGSRLTVIED-V 186
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+G + + +E + ++ H Q+
Sbjct: 187 QAQGES--FNTAFVEYNVAANARLEHYRFAMQT 217
>gi|163786784|ref|ZP_02181232.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
gi|159878644|gb|EDP72700.1| hypothetical protein FBALC1_16402 [Flavobacteriales bacterium
ALC-1]
Length = 437
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 25/258 (9%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + +++ P+ +R + +T + +P+++ E +++T + +
Sbjct: 1 MSLKEKLVSSFMAFENTIDVDSPVHDIRTEAIKTFETEGFPTKRQEAWKYTSLNSVLKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ ++L+ D ++ IDG S+L + G + +
Sbjct: 61 YSVFPKHENALEFKDVKKYFIHDIDSYKIIFIDGKYS------SHLSQTTHDGIDVCLMS 114
Query: 163 GIMKR------VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
+ + + ++ ++ D S+N + + I++P V+ PI + + S
Sbjct: 115 AALTKPKYQLIIENYFNKIASKDSLASLNTAFSSEGAYIHIPKNKLVDKPIQIIHFST-- 172
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
GN + L PR +V+V+E V IIE N NSV E+ K V +
Sbjct: 173 GNEAALMLQ---PRNLVVVDENSHVQIIERHQSLTDNPV-LTNSVTEIFTNKRAIVDYYK 228
Query: 277 LQNQSLNAAHIKWTAVRQ 294
+QN + NA+ I T V Q
Sbjct: 229 IQNDNENASLIDNTYVNQ 246
>gi|218131829|ref|ZP_03460633.1| hypothetical protein BACEGG_03450 [Bacteroides eggerthii DSM 20697]
gi|217986132|gb|EEC52471.1| FeS assembly protein SufD [Bacteroides eggerthii DSM 20697]
Length = 447
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV+V++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLVILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+EV +G+ L+ + I V+Q
Sbjct: 214 ATQVIEVFVGENATFDFYELEETHTSTVRISALYVKQ 250
>gi|317474555|ref|ZP_07933829.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
gi|316909236|gb|EFV30916.1| FeS assembly protein SufD [Bacteroides eggerthii 1_2_48FAA]
Length = 447
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKVEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++D + V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEMADRHPELVRKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV+V++EEG + ++ + + +
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLVILEEGAQARLLACDHAMDSVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+EV +G+ L+ + I V+Q
Sbjct: 214 ATQVIEVFVGENATFDFYELEETHTSTVRISALYVKQ 250
>gi|393769168|ref|ZP_10357696.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
gi|392725409|gb|EIZ82746.1| FeS assembly protein SufD [Methylobacterium sp. GXF4]
Length = 440
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS---SSLDVSTDAQFPS--- 130
R+ + + + PSR+ E F++TD + P PS + V++ F
Sbjct: 34 REEAFRFFEAAGLPSRRVEAFKYTDLRAAMKEAVPPAEAPSPEVAQAAVASAKGFAGLDA 93
Query: 131 --LVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMKRVSDFISEFQCGDLFWSIN 185
L ++G + +L LP G+ V L +G D ++ ++ E + + +N
Sbjct: 94 ARLTFVNGHLIRPLSDLDGLPAGLTVTPLNDAMGKGDARLRLLAPV--EQARENPVFQLN 151
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D +I V G K+E ++L+++ S+ + RV+V + G E+ ++E
Sbjct: 152 TAFLADGALISVAPGTKIERALHLRFV-----GTGSEGFSTAT-RVLVDLGAGAELTLLE 205
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G + + Y N L+V +GK RH+ L + A + +VR
Sbjct: 206 SHEGPD-DITYQPNDALDVRVGKQAVFRHARLNREGKAAIALSTISVR 252
>gi|384432018|ref|YP_005641378.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
gi|333967486|gb|AEG34251.1| FeS assembly protein SufD [Thermus thermophilus SG0.5JP17-16]
Length = 431
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 49/242 (20%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS---------------MIKSS 108
S +L +P L + R + + P+PS+KDE +R+TD S + +
Sbjct: 13 SKALGEPGWLLEKRLKALEAFARLPYPSKKDENWRYTDLSEAPLELPVEAPKGLRLSRDD 72
Query: 109 QIQPITRPSSSLDVS----------TDAQFPSLVLIDGFIQNS-ALNLSNLPDGVYVGSL 157
+P+ R DVS A+ P + G + S A L PD V
Sbjct: 73 LPEPVKRRLERTDVSGFLVFVGPDLVYAEVPEALKEKGLVFTSLAEALKTHPDKVEAALF 132
Query: 158 LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
V D F + N +YVPAG +VE P+ + + +EG
Sbjct: 133 QAVY---------------TEDKFAAQNSAFFTHGAFLYVPAGLEVEKPLGVFKVLLEGE 177
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S R ++ +E+ + IEE++ + + S E+V+ G ++RH+++
Sbjct: 178 KA-------SAGRSLLFLEDNAKAAYIEEYLSLDLSPTLHL-SATEMVLRPGARLRHAHV 229
Query: 278 QN 279
Q
Sbjct: 230 QT 231
>gi|347757852|ref|YP_004865414.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
gi|347590370|gb|AEP09412.1| feS assembly protein SufD [Micavibrio aeruginosavorus ARL-13]
Length = 414
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDV 122
S + L +P L RD + + + P+ K E +++T+ I P+ + +
Sbjct: 33 SDTLLHEPDWLAACRDKAREIVARRGLPTAKLEGWKYTN--------ILPVVKAIN---- 80
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLP-DGVYVGSLLGV--SDGIMKRVSDFIS--EFQC 177
Q +N+++ G+ V SL G+ D + K +S +S E+
Sbjct: 81 ----------------QAGTVNITHKEGHGITVNSLAGMLGEDWVQKAISAPLSDKEYNA 124
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
+ W + + D VI VPA + + P+ L ++ +GG ++N R+++ +
Sbjct: 125 ENTLWYLGNLFLRDGLVIDVPANTEAKTPLDLTMVA-DGG--------LANARLIIRLGA 175
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWT 290
+ +IE G YW N ++++ G + H Q S A H + T
Sbjct: 176 NARLTVIEHHTG---TGAYWKNIQTQIILADGAHLTHVRYQEDSEQAVHTQLT 225
>gi|329964517|ref|ZP_08301571.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
gi|328524917|gb|EGF51969.1| FeS assembly protein SufD [Bacteroides fluxus YIT 12057]
Length = 447
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSL-VLIDGFIQN 140
+P+RK E +R+TD S + ++++ P SL +++ N
Sbjct: 42 FPTRKQEKYRYTDVSKFFEPDYGLNLNRLELPVNPYEVFKCDVPNMSTSLYFVVNDVFYN 101
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYVP 198
AL +LP+GV GSL ++ + V + + D + N A D ++YVP
Sbjct: 102 KALPKPHLPEGVIFGSLKEMAQQHPELVKKYYGKLADTSEDGVTAFNTAFAQDGVLLYVP 161
Query: 199 AGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWA 258
VE PI L +++ G+V+ + N RV++++EEG + ++ +G + + A
Sbjct: 162 KNVVVEKPIQL--VNILRGDVNF----LVNRRVLIVLEEGAQARLLACDHAMDGVN-FLA 214
Query: 259 NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V+EV G+ L+ + I V+Q
Sbjct: 215 TQVIEVFAGENATFDLYELEETHTSTVRISNMYVKQ 250
>gi|307565753|ref|ZP_07628222.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
gi|307345579|gb|EFN90947.1| FeS assembly protein SufD [Prevotella amnii CRIS 21A-A]
Length = 447
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 52/248 (20%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
+ LRD + +PS+K+E +++T+ I + P+ L+++
Sbjct: 26 MNDLRDEAFMNFKKLGFPSKKEERYKYTN--------IHSLFEPNYGLNLNRLEIPIDPY 77
Query: 125 ---DAQFPSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEF- 175
P+L FI N L LP +GV + SL + + ++ + +
Sbjct: 78 KTFKCGIPNLSTSLYFIVNDQLYTKKLPNTYLGEGVIIDSLAKAATHYPELITKYYGKLA 137
Query: 176 -QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ++N M A D IYVP K++N + + +++ +VD + N RV+++
Sbjct: 138 KTSEDGITALNTMLAQDGLFIYVPKNVKLKNTVQI--VNILRSDVD----LMVNRRVLII 191
Query: 235 VEEGGE-----------------VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+EEG E +IE FV GN+ + + LE K ++ ++++
Sbjct: 192 LEEGAEGQFLFCDDTADDRNFLTTQVIEAFV---GNNAHIDLNCLEETHTKNVRISNAFI 248
Query: 278 QNQSLNAA 285
Q +S + A
Sbjct: 249 QQESYSKA 256
>gi|410028958|ref|ZP_11278794.1| Iron-regulated ABC transporter permease protein SufD [Marinilabilia
sp. AK2]
Length = 425
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 24/228 (10%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
S P Q++R +S L T P+ K+E ++FT I Q I +L + D
Sbjct: 16 SHPHLNNYQEMRKNSEAFLQKTGLPAPKEEEYKFT---AISKKIDQSIKNFGPALPTNLD 72
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDFISEFQCG----- 178
+ + +GF + L +N G+Y L D +K + + E G
Sbjct: 73 QELVQKEVFEGF-EGDILVFNN---GIYQAELSRFTGQDYALKAL-ELEEEAGLGKIVKI 127
Query: 179 --DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D F ++N I+V ++E PI+L + + + I PR+ + VE
Sbjct: 128 EKDPFTALNNATFSSGVSIHVGRNRQIEKPIFLLFFN------QANNGEIITPRLYIQVE 181
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
+ EV +E V +D Y++N V E+ + + V +S LQ +S A
Sbjct: 182 DNAEVTFLENTVSL-NDDPYFSNMVTEIKVAQNAHVHYSRLQAESRKA 228
>gi|340351752|ref|ZP_08674655.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella pallens ATCC 700821]
gi|339616966|gb|EGQ21601.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella pallens ATCC 700821]
Length = 447
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 29/238 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLDVSTDAQF 128
L K+RD + + +P++K E +++TD S + + +Q + P + +
Sbjct: 26 LNKVRDKAFEDFKRQGFPTKKMERYKYTDISKLFAPDYGLNLQRLKMPINPYE-EFKCDV 84
Query: 129 PSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEF------QC 177
P L F+ N LP DG+ V S L +K S+ I++
Sbjct: 85 PDLNTSLYFVVNDQFYTDQLPKPQLNDGIVVDSFLNA----LKTHSEIITKHYAKLADTA 140
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D + N M A D +YVP K + I + +++ +V+ + N R+++++E+
Sbjct: 141 KDALTAFNTMLAQDGLFVYVPKDVKADRTI--QVINILRSDVN----LMLNRRILIVLED 194
Query: 238 GGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G E+ ++ F +D + A V+E +G K+ + L+ L I + Q
Sbjct: 195 GAELSML--FCDDSADDRKFLATQVIEAYVGNNAKLELNCLEETHLKNVRISNVYIDQ 250
>gi|223984309|ref|ZP_03634453.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
gi|223963742|gb|EEF68110.1| hypothetical protein HOLDEFILI_01747 [Holdemania filiformis DSM
12042]
Length = 469
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPI- 207
G + +D +++V + + E+ + ++ N A + V IYVP G K+E P+
Sbjct: 144 GVIFLDTDSALQQVPELVKEYFATVVPYTDNKFAALNSAVWSGGSFIYVPKGVKLEKPLQ 203
Query: 208 -YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
Y + S + G + R +++V+EG +V +E + +V+E++I
Sbjct: 204 SYFRINSEQMGQFE---------RTLIIVDEGADVHYVEGCTAPTYSKDSLHAAVVEIII 254
Query: 267 GKGGKVRHSYLQNQSLN 283
+GGK R+S +QN S N
Sbjct: 255 KEGGKCRYSTVQNWSDN 271
>gi|399024661|ref|ZP_10726692.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
gi|398079958|gb|EJL70791.1| FeS assembly protein SufD [Chryseobacterium sp. CF314]
Length = 441
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 23/254 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKL---RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
+L D + + S + L + L R ++ Q +T +P++KDE +++T I
Sbjct: 8 ALYDQIIDNHSEFLESLHHRFLDGDRKAALQRFENTGFPTKKDEEYKYTSLKEITEKDYN 67
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQN--SALNLSNLPDGVYVGSLLGVSD 162
+ S ++ + F +V ++G + S +++ N+ ++ ++D
Sbjct: 68 FFPKESHNITKEQLEELHLGEENFDWIVFVNGKLHKELSKISIENVE---FLSFNYALND 124
Query: 163 GIMKRVSD-FISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
K V + + + D F ++N + VP +E PI++ YLS +
Sbjct: 125 AKHKEVFETYFNTIATKDSAFTNLNLAYCKYGFFLKVPKDVVIEKPIHVFYLSQ-----N 179
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
++ N R +++VEEG +V +IE + N + NSV E+ K LQN
Sbjct: 180 QEENTFYNTRNLLIVEEGAKVEVIESHHNFD-NSYVFTNSVTEIFTYPNAKADWHKLQND 238
Query: 281 SLNAAHIKWTAVRQ 294
+ + I T RQ
Sbjct: 239 NDTSYLIDNTFARQ 252
>gi|393779806|ref|ZP_10368041.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392609763|gb|EIW92566.1| FeS assembly protein SufD [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 433
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYVI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A LV ++G+ + S+ ++ + +L + +K+ F + + GD+F +
Sbjct: 81 ADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGGEAFIKKY--FNANTEKGDVFTA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A + I VP V+ PI L Y + D K+ PR ++ V E ++ +
Sbjct: 139 LNTAFASEGIYIEVPKAKVVDKPIQLLYFN------DRKETTCYQPRNIIAVGENAQLKV 192
Query: 244 IEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IE V + +D A N V E + K + + LQN SL A+ I T + Q
Sbjct: 193 IE--VHQNLSDTATAILTNVVTEAFVAKDAFLDYYKLQNDSLTASLIDNTYISQ 244
>gi|340617828|ref|YP_004736281.1| protein SufD [Zobellia galactanivorans]
gi|339732625|emb|CAZ95893.1| Protein SufD [Zobellia galactanivorans]
Length = 438
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 22/253 (8%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + +PS+K+E +++T + ++
Sbjct: 3 LKDKLISSFMAFENNVDIEHPVHDVRTEAMKNFERKGFPSKKEEAWKYTSLNSLQKIDFS 62
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
R ++L+ ++ +V +DG I +S L+ DGV + +
Sbjct: 63 IFPREENTLEYKNVKKYFLHEVDSYKIVFVDG-IYSSYLS-ETTHDGVDICLMSAALTKP 120
Query: 165 MKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
M R + + ++ D S+N + + IY+P + PI + + + GN S
Sbjct: 121 MYRPVIDVYFNKVASKDESLTSLNTAFSREGAYIYIPKNKMPKKPIEIIHFAT--GNEAS 178
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +V+ EE EV IIE N+ NSV E+ K V + +QN +
Sbjct: 179 LLLQ---PRNLVIAEENAEVQIIERHQSLTSNEV-LTNSVTEIFAAKNAIVDYYKIQNDA 234
Query: 282 LNAAHIKWTAVRQ 294
+A+ I T + Q
Sbjct: 235 PSASLIDNTYIDQ 247
>gi|256820069|ref|YP_003141348.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
gi|256581652|gb|ACU92787.1| FeS assembly protein SufD [Capnocytophaga ochracea DSM 7271]
Length = 433
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 22/234 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI---QPITRPSS----SLDVSTD 125
L+ +R + +P +K E +++T S ++++ QPI ++ L
Sbjct: 21 LKDIRKEALSFFAEKGFPHKKVEAWKYTSLSNLQATDYSLWQPIHNKTTLSPEVLHKYVI 80
Query: 126 AQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
A LV ++G+ + S+ ++ + +L + +K+ F + + GD+F +
Sbjct: 81 ADCYVLVFVNGYYSPEMSSKEIAGATITPLLEALHKGGEAFIKKY--FNANTEKGDVFTA 138
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N A + I VP V+ PI L Y + D K+ PR ++ V E ++ +
Sbjct: 139 LNTAFASEGIYIEVPKAKVVDKPIQLLYFN------DRKEPTCYQPRNIIAVGENAQLKV 192
Query: 244 IEEFVGKEGNDCYWA---NSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IE V + +D A N+V EV + K + + LQN L A+ I T + Q
Sbjct: 193 IE--VHQNLSDTATAILTNAVTEVFVAKDAFLDYYKLQNDRLTASLIDNTYISQ 244
>gi|427384574|ref|ZP_18881079.1| FeS assembly protein SufD [Bacteroides oleiciplenus YIT 12058]
gi|425727835|gb|EKU90694.1| FeS assembly protein SufD [Bacteroides oleiciplenus YIT 12058]
Length = 447
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NKALPTSHLPEGVIFGSLKEMAEKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVIVERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV +G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISSLYVKQ 250
>gi|254447152|ref|ZP_05060619.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
gi|198263291|gb|EDY87569.1| FeS assembly protein SufD [gamma proteobacterium HTCC5015]
Length = 439
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 39/246 (15%)
Query: 61 PSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
P+ +S+LP PL K RD ++ L + P+R+ E ++++ ++ QI TR ++
Sbjct: 17 PAHTSALPAPLA--KWRDEAAPHLSALTLPTRRTENWKYSYRALKLDDQIAQ-TRTNAPQ 73
Query: 121 DVSTDAQFPS------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
S D+ P LV+ +G+I SA S LP + LL S+ + D ++
Sbjct: 74 TDSADS-VPHHGLGYRLVIRNGWIDRSA---SRLPQQSGI-ELLAFSE-----LDDLQAQ 123
Query: 175 FQCGDL----------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
G L +N D VI + G ++ P+YL G
Sbjct: 124 ALAGKLGSCLDAKTTQLAVLNQAHLADGLVIRLAKGAVLDQPLYLAIHGDAGA------- 176
Query: 225 PISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
S PR+ + E ++ ++EE+ EG D N+ +E+ + V L ++ ++
Sbjct: 177 --SYPRIWLEAAENSQIAVVEEY-SSEGADPTLTNAAVEMTLAANAHVNWVRLALEAEHS 233
Query: 285 AHIKWT 290
HI T
Sbjct: 234 QHIGAT 239
>gi|445115334|ref|ZP_21378209.1| FeS assembly protein SufD [Prevotella nigrescens F0103]
gi|444840445|gb|ELX67477.1| FeS assembly protein SufD [Prevotella nigrescens F0103]
Length = 447
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSS-----SLDVS 123
L K+RD + + + +P++K E +++TD + + +Q + P + DV
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLKMPINPYEDFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
+ V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 86 NLSTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKDAL 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG E+
Sbjct: 145 TAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGAEL 198
Query: 242 GIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ F +D + A V+E +G K+ + L+ L + + Q
Sbjct: 199 SML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIDQ 250
>gi|320449480|ref|YP_004201576.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
gi|320149649|gb|ADW21027.1| FeS assembly protein SufD [Thermus scotoductus SA-01]
Length = 430
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS 123
S +L +P + + R + + P+PS+KDE +R+TD S ++ Q + P L +S
Sbjct: 13 SRALKEPGWVLEKRLKALEAFARLPYPSKKDEAWRYTDLS--EAPLEQEVETPKG-LSLS 69
Query: 124 TDAQFPSLVL-------IDGFIQNSALNL--SNLPDGVYVGSLL--GVSDGIM----KRV 168
D + P LV + GF+ +L + +P+ + L+ +++ + K
Sbjct: 70 RD-ELPELVKRRLEKTDVSGFLVFVGPDLVYAEVPEELSAKGLVFTSLAEALKTHPGKVE 128
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ D F + N +YVPAG +VE P+ + + +EGG S
Sbjct: 129 ATLFRGVYVEDKFAAENSAFFTHGAFLYVPAGLEVEKPLGV-FKVLEGGKA-------SA 180
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
R ++ +E+ + IEE++ + S E+V+ G ++RH+++Q
Sbjct: 181 GRSLIFLEDNAKAAYIEEYLSLDLPPTLHL-SATEMVLRPGARLRHAHVQT 230
>gi|303235596|ref|ZP_07322203.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
gi|302484043|gb|EFL47031.1| putative FeS assembly protein SufD [Prevotella disiens FB035-09AN]
Length = 447
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 31/239 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSLDVSTDAQF 128
L K+RD + + + +P++K E +++TD + + +Q + P + D S
Sbjct: 26 LNKVRDKAFEDFKTQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLETPINPYD-SFKCDV 84
Query: 129 PSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVS-------DGIMKRVSDFISEFQ 176
P+L F+ N LP +G+ + S+ + + R++D
Sbjct: 85 PNLSTSLYFVVNDQFYNKQLPKVQLNEGIVIDSICNAAKIYPELLEQHYARIAD-----T 139
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
D + N M A D IYVP G K + I + +++ NV+ + N RV++++E
Sbjct: 140 SKDALTAFNTMLAQDGLFIYVPKGIKADRTI--QVINILRSNVN----LMVNRRVLIIIE 193
Query: 237 EGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EG E ++ F +D + V+E + K+ + L+ L + + Q
Sbjct: 194 EGAEASML--FCDDSTDDRNFLTTQVIEAYVADNAKLELNCLEETHLKNVRVSNVYIEQ 250
>gi|365122292|ref|ZP_09339196.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
gi|363642792|gb|EHL82132.1| FeS assembly protein SufD [Tannerella sp. 6_1_58FAA_CT1]
Length = 447
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 38/259 (14%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
L D S S P+ L LR+ + T +PS DE ++ T+ I +
Sbjct: 10 LYDQYHSLIDSHASPI-LNALREKAMSDFRVTGFPSPNDEEYKHTN--------IPDLFA 60
Query: 116 PSSSLDVST-----------DAQFPSLVLIDGFIQNSALNLSN-----LPDGVYVGSLLG 159
P L+++ P+L + F+ N + LP+GV +GSL
Sbjct: 61 PDYGLNLNRLEIPVNPYEVFRCDVPNLSTLLYFVVNDSFYTKENPKVKLPEGVLIGSLNE 120
Query: 160 VSDGIMKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
++ V + + C D ++N D +YVP G +E PI L +++ G
Sbjct: 121 MARSHPDLVQRYYGKQACTQNDGIVALNTAFVQDGFFLYVPKGVIIEKPIQL--INILRG 178
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGII--EEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
+ D + N R+++++EEG + ++ + + K+ + ++ V E+ GK +
Sbjct: 179 DADF----MVNRRLLIILEEGAQARLLVCDHTMDKKK---FLSSQVTEIYAGKNAVFDYY 231
Query: 276 YLQNQSLNAAHIKWTAVRQ 294
++ SLN I T V Q
Sbjct: 232 DIEESSLNTNRITSTFVDQ 250
>gi|345302709|ref|YP_004824611.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
gi|345111942|gb|AEN72774.1| FeS assembly protein SufD [Rhodothermus marinus SG0.5JP17-172]
Length = 444
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 25/229 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQPI-TRPSSSLDVSTDAQFP 129
L LR + + +P RK E +++T ++ +I P+ P+ + P
Sbjct: 35 LAALRRKAIERFGVLGFPGRKSEAWKYTPIAKALQHPYRIDPMPAVPALTEQALAGYAIP 94
Query: 130 SL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL---- 180
L VL++G S+LP+GV + L + +R +D ++ L
Sbjct: 95 ELDAYRVVLVNGRFVPELSTTSDLPEGVVLTGL----EEAARRHADLFEKYFAHYLDFEN 150
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N A D +YVP G +E P+++ L +D+ + PR VV+ G
Sbjct: 151 EPFLALNTAFARDGFFLYVPEGATLERPVHVFNL------IDTDEELFLQPRNVVVAAPG 204
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ ++ + + N V EV +G+G +V L+ +S A+ I
Sbjct: 205 ASLKLVTSGHNRTAQRTF-TNGVTEVFVGQGAEVHQYDLRLESEAASGI 252
>gi|387132366|ref|YP_006298338.1| FeS assembly protein SufD [Prevotella intermedia 17]
gi|386375214|gb|AFJ08352.1| FeS assembly protein SufD [Prevotella intermedia 17]
Length = 447
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 21/234 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSS-----SLDVS 123
L K+RD + + + +P++K E +++TD + + +Q + P + DV
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLRMPINPYEDFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
+ V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 86 NLSTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKDAL 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG E+
Sbjct: 145 TAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGAEL 198
Query: 242 GIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ F +D + A V+E +G K+ + L+ L + + Q
Sbjct: 199 SML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIDQ 250
>gi|340350381|ref|ZP_08673373.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella nigrescens ATCC 33563]
gi|339608459|gb|EGQ13354.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella nigrescens ATCC 33563]
Length = 447
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS----SQIQPITRPSSSL-DVSTDAQ 127
L K+RD + + + +P++K E +++TD + + +Q + P + D D
Sbjct: 26 LNKVRDKAFEDFKAQGFPTKKVERYKYTDIPKLFAPDYGLNLQRLRMPINPYEDFKCDV- 84
Query: 128 FPSL------VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGD 179
P+L V+ D F N L + L DG+ V S + +++ ++ D
Sbjct: 85 -PNLNTSVYFVVNDQFY-NDQLPKAQLNDGIVVDSFSNAIKTHGEIITNHYAKLADTAKD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
+ N M A D +YVP G K + I + +++ +VD + N R+++++EEG
Sbjct: 143 ALTAFNTMLAQDGLFVYVPKGVKSDRTI--QVINILRSDVD----LMLNRRILIVLEEGA 196
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E+ ++ F +D + A V+E +G K+ + L+ L + + Q
Sbjct: 197 ELSML--FCDDSADDRKFLATQVIEAYVGDNAKLELNCLEETHLKNVRVSNVYIEQ 250
>gi|393786113|ref|ZP_10374252.1| FeS assembly protein SufD [Bacteroides nordii CL02T12C05]
gi|392660697|gb|EIY54305.1| FeS assembly protein SufD [Bacteroides nordii CL02T12C05]
Length = 447
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDISKFFAPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL V++ V + + D + N A D ++YV
Sbjct: 101 NKALPKSHLPEGVIFGSLKEVAEQHPDLVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVERPIQL--INILRADVNF----MVNRRVLIILEEGAQARLLMCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIG 267
A V+EV G
Sbjct: 214 ATQVVEVFAG 223
>gi|407684525|ref|YP_006799699.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
gi|407246136|gb|AFT75322.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'English Channel 673']
Length = 418
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSL 131
L +R + + L + WP+R++E +RFT T + K Q + S + + L
Sbjct: 18 LAPVRQQALEKLKADGWPARRNESWRFTPLTPVEKRDAKQAVQADSLPVPAIDNLNAIDL 77
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGMGAP 190
V +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 78 VFVDGVLV-TQVNTLDVPAGMSITSLNSDDAATQQAISSVYGQVKPTRHMFGLVNDALCQ 136
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
I V AG K++ P+ + +++ NVD ++ RVVV V EG +IE+ G
Sbjct: 137 HGIFINVEAGAKIDTPV--RIVNMASQNVD------AHTRVVVKVGEGASATVIEQGFG 187
>gi|182677102|ref|YP_001831248.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
gi|182632985|gb|ACB93759.1| FeS assembly protein SufD [Beijerinckia indica subsp. indica ATCC
9039]
Length = 444
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 22/239 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQP 112
+L +S + ++LP + KLR+ + + P R+ E + +TD T M ++ + P
Sbjct: 15 TLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAP 74
Query: 113 ITRPSSSLDVSTDA-----QFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGV-SDGIM 165
+ P++ + D LVL+DG F+ + +P GV V SL V + G
Sbjct: 75 VPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELS---DTVPAGVTVHSLASVLTKGPA 131
Query: 166 KRVSDFISE-FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKL 224
+ ++ E GD ++N D V+ V G + P+ L Y + + +
Sbjct: 132 ELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYAT-------ASAM 184
Query: 225 PISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
P++ R +V V V I E +G EG N L +G KV H+ SL
Sbjct: 185 PVARFSRSLVAVGAKASVTIAESSLG-EGGRSGQTNGCLIFSVGDEAKVNHTTQLTGSL 242
>gi|423315855|ref|ZP_17293760.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
gi|405585571|gb|EKB59395.1| FeS assembly protein SufD [Bergeyella zoohelcum ATCC 43767]
Length = 426
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 102/237 (43%), Gaps = 18/237 (7%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS-------QIQPITRPSSSL 120
Q LQ + ++ + LS +P++KDE +++T + + IT+ +
Sbjct: 9 KQKNTLQGEKHAALEKFLSLGFPTKKDEEYKYTHLKEVTEKDYNFSPKKTHNITKEQLNQ 68
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR--VSDFISEFQCG 178
+ F LV ++G + +S + + ++ SL V + + V ++
Sbjct: 69 LHLGEENFDWLVFVNGELHKELSKIS-IENAEFL-SLEYVQNHEQYQPMVKQYLDTIANK 126
Query: 179 DLFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
DL ++ G +++P +E PI++ YLS + ++ N R +++ EE
Sbjct: 127 DLAFTQLNTALYSFGFFLHIPKNTVIEKPIHVFYLSQ-----NQEENTCYNVRNLLIAEE 181
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G +V IIE + + N+V E+ + KV LQN + ++ + T +Q
Sbjct: 182 GAKVEIIESHHNFDTTYTF-TNAVTEIFVASNAKVDWHKLQNDNASSYLVDHTFAKQ 237
>gi|347760112|ref|YP_004867673.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
gi|347579082|dbj|BAK83303.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
xylinus NBRC 3288]
Length = 423
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 132 VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPD 191
V ++G+ + S LP GV V + ++G R+ D I GD+ ++N + A D
Sbjct: 92 VFVNGYFDAAR---SRLPTGVRVSAF--AAEG---RIDDDIDP--TGDVTTALNTVLAHD 141
Query: 192 LGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGK 250
V+ VP G + L ++V G P+S +PR ++VE+GG + +++ VG
Sbjct: 142 GLVLVVPEGVDA-GCLLLASIAVAG------DAPVSIHPRHTIVVEKGGRLALLDASVG- 193
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+G+ Y N + ++ +G+ G + H+ +Q + A H+ + R
Sbjct: 194 QGD--YLHNPLYDITVGEDGHLSHARVQAEGDQAIHLAVSHAR 234
>gi|350563274|ref|ZP_08932096.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
gi|349779138|gb|EGZ33485.1| FeS assembly protein SufD [Thioalkalimicrobium aerophilum AL3]
Length = 446
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 52 LAESLEDSLPSSSSSLPQP----LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTS-MIK 106
+A++ D + ++ L Q L + R ++ + +PSRKDE ++FT S +K
Sbjct: 14 VAQAAMDYYQAQATRLIQAEGEGHALARFRQAALNEFIEQGFPSRKDEDWQFTPLSNFLK 73
Query: 107 SS-QIQPITRPSSSLDVSTDAQFPS---LVLIDGFIQNS-ALNLSNLPDGVYVGSLLGVS 161
+ I+R +++ D++ F LV +DG+ S + +L LPDGV + S
Sbjct: 74 THYHFNGISRATAA-DIAKLRPFVDAWHLVFVDGYFSESLSDDLVGLPDGVSIESGKDAL 132
Query: 162 DGIMKRVSDFISEFQC-GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS--VEGGN 218
D M SE D F +N M D I V ++E PI + Y+ E N
Sbjct: 133 DFEMGFCVFAQSEEDIQQDAFGMLNAMLFDDGVFIEVAPHVQLEKPIVISYVQTLAEHAN 192
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWA--NSVLEVVIGKGGKVRHSY 276
+ K+ + + + +IE++V D W NSV E+ + ++
Sbjct: 193 IVRNKIKLGSS---------ASLNVIEQYVAI---DDGWGFENSVCEIELAANARLNQVV 240
Query: 277 LQN 279
QN
Sbjct: 241 WQN 243
>gi|333029423|ref|ZP_08457484.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
gi|332740020|gb|EGJ70502.1| FeS assembly protein SufD [Bacteroides coprosuis DSM 18011]
Length = 447
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 40/232 (17%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---- 105
I L E + S+SS + + +LR ++ +P++K E F++TD +
Sbjct: 8 IDLFSQSEKVINSNSSVI-----MNRLRKNAISDFEKQGFPTKKLEDFKYTDVAKFFEPD 62
Query: 106 KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL-----NLSNLPDGVYVGSLLGV 160
++ + P++ D P+L I+ F+ N S +PDGV GSL +
Sbjct: 63 YGINLKRLNIPANP-DSVFKCDVPNLNTIECFMVNDVFYPEVRKQSLIPDGVVFGSLKDL 121
Query: 161 SDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
D V + + D ++N A D ++Y+P +E PI L L N
Sbjct: 122 GDKYADIVEKYYGQLADTSKDAISALNTAFAQDGILLYIPKNVIIEEPIQLINLLRADVN 181
Query: 219 VDSKKLPISNPRVVVLVEEGGE-----------------VGIIEEFVGKEGN 253
+ +SN R+++++E G + G+ E FVG+ N
Sbjct: 182 L------MSNRRLLIILERGAQAKMLICNHAVDEVEFLSTGVTEIFVGENAN 227
>gi|386717492|ref|YP_006183818.1| Iron-sulfur cluster assembly protein SufD [Stenotrophomonas
maltophilia D457]
gi|384077054|emb|CCH11640.1| Iron-sulfur cluster assembly protein SufD [Stenotrophomonas
maltophilia D457]
Length = 413
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 85 LSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA 142
L P+ ++E +++T + ++ P+ P+ + D P LV ++G + +
Sbjct: 19 LRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDAALLDDIPAPRLVFVNGRLDAAL 78
Query: 143 LNLSNLPDGVYV----GSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIY 196
++ LP GV + +L D + F+ + ++F +N A + V+
Sbjct: 79 SDVQALPSGVQLQPLSAALAAGEDAVR-----FLGRRYERSEEIFARLNAALADEGVVLR 133
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCY 256
V G +VE P+ L + SV G L + R ++ + G +G++E G+ +
Sbjct: 134 VDEGVQVETPLQLVFASVAG----EADLAWHH-RHLIELRAGASLGVVEHRFSV-GDSAH 187
Query: 257 WANSVLEVVIGKGGKVRHSYLQNQS 281
N+VL + + G ++H+ +Q S
Sbjct: 188 LDNTVLHAHVARDGVLKHARVQAGS 212
>gi|296087515|emb|CBI34104.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 25/26 (96%)
Query: 269 GGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G KV+HSY+Q+QSL+AAHIKWT+V+Q
Sbjct: 20 GAKVKHSYIQSQSLSAAHIKWTSVQQ 45
>gi|330997786|ref|ZP_08321621.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
gi|329569674|gb|EGG51439.1| putative FeS assembly protein SufD [Paraprevotella xylaniphila YIT
11841]
Length = 447
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 26/230 (11%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVS 123
+ L LRD + + +P++K E +++TD S + ++++ P +
Sbjct: 24 VALNALRDKAFEDFTRQGFPTQKVERYKYTDVSAAFAPDYGLNLNRVEFPVNPYEAFRCD 83
Query: 124 TDAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC--GD 179
SL + D F + AL + LP+GV V SL ++ RVS + D
Sbjct: 84 VPNLSTSLYFMVNDSFYR-KALPAAALPEGVVVCSLKQAAEDYPDRVSACYGKLARTEKD 142
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
++N M D IYVP G VE L+ +++ +VD ++N RV+V++EE
Sbjct: 143 AINALNTMLVQDGLFIYVPRGVVVERT--LQVVNILRSDVD----LMANRRVLVVLEENA 196
Query: 240 EVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
+V ++ F +D + V+EV + + L+ L H+K
Sbjct: 197 QVRLL--FCDHAMDDRNFLTTQVVEVFAAENTR-----LELYELEETHVK 239
>gi|270294862|ref|ZP_06201063.1| FeS assembly protein SufD [Bacteroides sp. D20]
gi|270274109|gb|EFA19970.1| FeS assembly protein SufD [Bacteroides sp. D20]
Length = 447
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK+E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKEEKYKYTDISKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
AL S+LP+GV GSL V+ V + + D + N A D + YV
Sbjct: 101 GRALPKSHLPEGVIFGSLKEVAGKHPDLVKKYYGKLADTAEDGVTAFNTAFAQDGVLFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ G+V+ + N RV++++EEG + ++ +G + +
Sbjct: 161 PKNVVVEKPIQL--VNILRGDVNF----MVNRRVLIILEEGAQARLLVCDHAMDGVN-FL 213
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
A V+E+ G+ L+ + I V+Q
Sbjct: 214 ATQVIEIFAGENAIFDFYELEETHTSTVRISNMYVKQ 250
>gi|423223490|ref|ZP_17209959.1| FeS assembly protein SufD [Bacteroides cellulosilyticus CL02T12C19]
gi|392638370|gb|EIY32211.1| FeS assembly protein SufD [Bacteroides cellulosilyticus CL02T12C19]
Length = 447
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++ + V + + D + N A D ++Y+
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAAKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYI 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV +G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISNMYVKQ 250
>gi|284046833|ref|YP_003397173.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
gi|283951054|gb|ADB53798.1| FeS assembly protein SufD [Conexibacter woesei DSM 14684]
Length = 420
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 12/224 (5%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEP-FRFTDTSMIKSSQIQPITRPSSSLD 121
+S+++ QP L + R ++ P+ K P + FTD S + + +
Sbjct: 2 ASATIEQPSWLAERRARAAGLTERLDLPTYKGRPGWEFTDISSLDLAAYAAAGDGDAGAV 61
Query: 122 VSTDAQFPSL---VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
DA F L +++ + LP+GV V +L + + V + G
Sbjct: 62 ARADALFVGLEQPIVVTQVDATTVEVSGELPEGVVVTTLERAAAEHPELVERHLGTIVAG 121
Query: 179 -DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D F + N G ++VP G V P+ + + + D L N R +++VE+
Sbjct: 122 EDAFVARNEAGFAGGLFVHVPRGTIVPRPVLVTVVQ----DADRTAL---NWRSLIVVED 174
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
GG+ + E+++ + N+V+E+V+G+ +R QN S
Sbjct: 175 GGQAEVWEQYLSADAERETLLNTVVELVVGENANLRFVNGQNLS 218
>gi|406672658|ref|ZP_11079883.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
gi|405587202|gb|EKB60930.1| FeS assembly protein SufD [Bergeyella zoohelcum CCUG 30536]
Length = 426
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 98/236 (41%), Gaps = 16/236 (6%)
Query: 68 PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS-------QIQPITRPSSSL 120
Q LQ + ++ + LS +P++KDE +++T + + IT+ +
Sbjct: 9 KQKNTLQWEKHAALEKFLSLGFPTKKDEEYKYTHLKEVTEKDYNFSPKKTHNITKEELNQ 68
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVG-SLLGVSDGIMKRVSDFISEFQCGD 179
+ F LV ++G + +S + + ++ + + V ++ D
Sbjct: 69 LHLGEENFDWLVFVNGELHKELSKIS-IENAEFLSLEYVQSHEQYQPMVKQYLDTIANKD 127
Query: 180 LFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
L ++ G +++P +E PI++ YLS + ++ N R +++ EEG
Sbjct: 128 LAFTQLNTALYSFGFFLHIPKNTVIEKPIHVFYLS-----QNQEENTCYNVRNLLIAEEG 182
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+V IIE + + N+V E+ + KV LQN + + + T +Q
Sbjct: 183 AKVEIIESHHNFDTTYTF-TNAVTEIFVASNAKVDWHKLQNDNATSYLVDHTFAKQ 237
>gi|224536658|ref|ZP_03677197.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521749|gb|EEF90854.1| hypothetical protein BACCELL_01534 [Bacteroides cellulosilyticus
DSM 14838]
Length = 447
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL ++ + V + + D + N A D ++Y+
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAAKHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVLLYI 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGG 270
+ A V+EV +G+
Sbjct: 212 FLATQVIEVFVGENA 226
>gi|384097324|ref|ZP_09998445.1| FeS assembly protein SufD [Imtechella halotolerans K1]
gi|383837292|gb|EID76692.1| FeS assembly protein SufD [Imtechella halotolerans K1]
Length = 438
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 34/259 (13%)
Query: 56 LEDSLPSSSSSLPQPLPL----QKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + +R + +T +PS+KDE +++T + + +
Sbjct: 3 LKDKLVSSFMIFENQVDIDSSVHDIRSEAIKTFEEKGFPSKKDEAWKYTSLNSLLKNNYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG----- 159
+ +SL+ S D +V +DG + +S L+ ++ DG+ V +
Sbjct: 63 VFPKEDNSLEFSDIKKYFIHDIDSYKIVFVDG-VYSSNLSATS-HDGLDVCLMSSALTKP 120
Query: 160 ----VSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
V D +++D D ++N + + I +P G V PI + + S
Sbjct: 121 KYKMVIDNFFNKITD------KEDSLTALNTAFSREGAYINIPKGKVVNKPIQILHFST- 173
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G ++ L +PR +++V E V IIE GN NSV E+ K V +
Sbjct: 174 -GRDEALML---HPRNLIIVGENSHVQIIERHQSLSGNPV-LTNSVTEIFANKNAIVDYY 228
Query: 276 YLQNQSLNAAHIKWTAVRQ 294
+QN S +A+ I T + Q
Sbjct: 229 KIQNDSKSASLIDNTFISQ 247
>gi|304383862|ref|ZP_07366319.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
gi|304334940|gb|EFM01213.1| FeS assembly protein SufD [Prevotella marshii DSM 16973]
Length = 455
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 27/215 (12%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----------IQPI-TRPSSSL 120
+ +R+ + + P++K E +++TD + + I P T P
Sbjct: 35 MNAMREQAFEDFKRIGIPTKKVEHYKYTDMQALFAPDYGLNLNRIDIPINPYETFPCDVP 94
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CG 178
++ST F V+ D F + L + LP GV V SL V++ + V + + C
Sbjct: 95 NLSTTLYF---VINDRFY-DKHLPAATLPAGVIVDSLKKVAEEHPELVEKYYGKLAATCD 150
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D ++N M A D +YVP ++ I + L++ +VD ++N RVV+ +EEG
Sbjct: 151 DSMTALNTMLAQDGLFVYVPKNVRLNRCI--QVLNLLRSDVD----LMANRRVVIALEEG 204
Query: 239 GEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKV 272
E + F +D + V+E +G +
Sbjct: 205 AEAKFL--FCDHAADDRQFLTTQVIEAYVGSNASL 237
>gi|254522712|ref|ZP_05134767.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
gi|219720303|gb|EED38828.1| FeS assembly protein SufD [Stenotrophomonas sp. SKA14]
Length = 420
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--KSSQIQPITRPSSSLDVS 123
S+ Q R L P+ ++E +++T + ++ P+ P+ +
Sbjct: 7 SMAQAFCGSDARREVLDAALRDGLPAARNEAWKYTSLRQLERRAFAAAPLQGPALDATLL 66
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVSDGIMKRVSDFISEF--QCGDL 180
D P LV ++G + + ++ LP GV + L ++DG + F+ + ++
Sbjct: 67 EDIPAPRLVFVNGRLDAALSDVQALPAGVQLQPLSAALADG--EDAVRFLGRRYERSEEI 124
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F +N A + V+ V G +V+ P+ L + SV G+ D + R ++ + G
Sbjct: 125 FARLNAALADEGVVLRVDEGVQVDVPLQLVFASV-AGDTDLAW----HHRHLIELRAGAS 179
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+G++E G+ + N+VL + + G ++H+ +Q S
Sbjct: 180 LGVVEHRFSV-GDSAHLDNTVLHAHVARDGVLKHARVQASS 219
>gi|334143296|ref|YP_004536452.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
gi|333964207|gb|AEG30973.1| FeS assembly protein SufD [Thioalkalimicrobium cyclicum ALM1]
Length = 446
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 30/244 (12%)
Query: 52 LAESLEDSLPSSSSSLPQP----LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS 107
+A++ D S ++ L Q L + R ++ + +P+RKDE ++FT S
Sbjct: 14 VAKAAMDYYQSQATRLIQAEGEGHALARFRQAALHHFVEQGFPTRKDEDWQFTPLSNFLK 73
Query: 108 SQIQPITRPSSSLDVSTDAQFP------SLVLIDG-FIQNSALNLSNLPDGVYVGS---L 157
+ S D ++ A+ LV +DG F + + +L LP GV + S
Sbjct: 74 THYH--FNGVSQFDKASIAKIKPPVDAWHLVFVDGCFSEALSDDLVKLPKGVSIESGKDA 131
Query: 158 LGVSDG--IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVE 215
L G + + D I + D F +N M D I + A ++ PI + Y
Sbjct: 132 LDFEQGFRVFAKHEDEIEQ----DAFGMLNAMLFDDGVFIELAAHTHLDKPIAISY---- 183
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
V + K + R + + G ++ +IE++V + + C + NSV E+ + + ++
Sbjct: 184 ---VQTLKDHANTTRNKIKLGVGSQLQLIEQYVALD-DACGFENSVCEIELAEQAQMSQV 239
Query: 276 YLQN 279
QN
Sbjct: 240 VWQN 243
>gi|410862378|ref|YP_006977612.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
gi|410819640|gb|AFV86257.1| cysteine desulfurase activator SufB [Alteromonas macleodii AltDE1]
Length = 418
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + L + WP+R++E +RFT + I+ + +Q P ++D +
Sbjct: 18 LSPVRQQALAQLKADGWPARRNESWRFTPLTPIEKREAKQAVQADNLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
L+ +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 IDLIFVDGVLV-TQVNTLDVPAGMSITSLNSDDAATQQAISSVYGKVKPSRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD ++ RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVD------AHTRVVVKVAEGASATVIEQG 185
Query: 248 VG 249
G
Sbjct: 186 FG 187
>gi|260772564|ref|ZP_05881480.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
gi|260611703|gb|EEX36906.1| iron-sulfur cluster assembly protein SufD [Vibrio metschnikovii CIP
69.14]
Length = 419
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L +R + L T WP+R+ E +R+T S ++ ++ P + ++ +++ A +
Sbjct: 19 LSPVRQQALNALRQTRWPTRRTEAWRYTSLSCLEQLELSPKS-DNAPFNLAPIAGLETID 77
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGV-SDGIMKRVSDFISEFQCGDLFWSINGMGA 189
LV +DG +Q + L+ NLP GV + S + +D VS F LF +N + A
Sbjct: 78 LVFVDGQLQ-TDLSALNLPQGVSIYSAQSLPADQQAAAVSRFSQVKPSRHLFGMVNDVLA 136
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
++ I V C PI + + + G ++ RV V + G++ +IE G
Sbjct: 137 DNVLFIDVDPECHCTTPIRIVHHNHHGYE--------AHYRVQVNLGHHGKLTLIEHAQG 188
Query: 250 KEGN 253
N
Sbjct: 189 SGDN 192
>gi|189465086|ref|ZP_03013871.1| hypothetical protein BACINT_01430 [Bacteroides intestinalis DSM
17393]
gi|189437360|gb|EDV06345.1| FeS assembly protein SufD [Bacteroides intestinalis DSM 17393]
Length = 447
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTSLYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S+LP+GV GSL +++ + + + + D + N D ++YV
Sbjct: 101 NKALPASHLPEGVIFGSLKEMAEKYPELLKKYYGKLADTSKDGVTAFNTAFTQDGVLLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P +E PI L +++ G+V+ + N RV++++E+G + ++ V D
Sbjct: 161 PKNVALERPIQL--VNILRGDVNF----LVNRRVLIVLEDGAQARML---VCDHAMDAVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV +G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFVGENAVFDLYELEETHTSTVRISNMYVKQ 250
>gi|163849011|ref|YP_001637055.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222526973|ref|YP_002571444.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
gi|163670300|gb|ABY36666.1| FeS assembly protein SufD [Chloroflexus aurantiacus J-10-fl]
gi|222450852|gb|ACM55118.1| FeS assembly protein SufD [Chloroflexus sp. Y-400-fl]
Length = 404
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 191 DLGVIYVPAGCKVENPIYLKY-LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D ++YVP G +E P+ L Y L +G + PR +V+VE V +IEEF
Sbjct: 124 DGALLYVPKGVAIEVPLRLIYTLGADGVAI--------FPRTLVIVEPQASVTLIEEFTS 175
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +A + E+ +G G VR +Q+ H+
Sbjct: 176 PDLRAGSFAGPITEIFVGDGASVRFVSIQHWGTGVYHL 213
>gi|407451526|ref|YP_006723250.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
gi|403312511|gb|AFR35352.1| hypothetical protein B739_0750 [Riemerella anatipestifer RA-CH-1]
Length = 426
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
SL +++ + SSSL + ++ + LS +PS+KDE +++T+ I Q Q +
Sbjct: 2 SLFENIKTHSSSLSGD------KLNALELFLSKGFPSKKDEEYKYTNLKEIIEKQYQFLP 55
Query: 115 RPSSSLDVST-------DAQFPSLVLIDG-------FIQNSALNLSNLPDGVYVGSLLGV 160
+ + + F +VL++G I + + + L + + G +
Sbjct: 56 QEEHHISEEELKALRLGEEDFDWVVLVNGKWRPELSKISDKDIKVLALDEALSNGESEAL 115
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+++ F +L ++ +G+ +YVP VE PI++ Y+S +
Sbjct: 116 FRPYFNTIANESWAFPNLNLAFAHSGVA------LYVPKNTVVEKPIHIFYIS-----QN 164
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ NPR +++VE G ++ +IE + + + NS+ E+ K LQN
Sbjct: 165 QSENTFYNPRNILVVEAGSQIEVIESHHNFDASFTF-TNSLTEIFTKPNAKADWHKLQND 223
Query: 281 SLNAAHIKWTAVRQ 294
+ + + T V+Q
Sbjct: 224 TDTSYLVDHTFVKQ 237
>gi|160872499|ref|ZP_02062631.1| FeS assembly protein SufD [Rickettsiella grylli]
gi|159121298|gb|EDP46636.1| FeS assembly protein SufD [Rickettsiella grylli]
Length = 434
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS---QIQPITRPSSSLDVSTDAQFP 129
L +LR ++ + +PS+K +++T + + + + + P L+ + +
Sbjct: 34 LTRLRRTALDAFTTMGFPSKKQADWKYTSFNTLHQTPYFLVASSSPPDPVLEATIGVR-- 91
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-GDLFWSINGMG 188
LV ++GF + +L + L+ + + V ++ + F +N
Sbjct: 92 -LVFVNGFFAPHLSTVIDLAQNDRITHLIQMHHHHPELVKAHVNSNAVEKNSFTQLNTAF 150
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
+ IY+PA + PI + +++ + ++ +P+ N +++ EE I+E+++
Sbjct: 151 LREGAFIYLPANTCLNTPIDVLFINTD--ETPNRFIPLRN---IIIAEENSHATIVEKYI 205
Query: 249 G--KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ N Y+ NSV E + + H N+S A H+ +V Q
Sbjct: 206 DMTSKKNTPYFTNSVTECYLSANSHIEHYQYINESQQAQHVGSLSVSQ 253
>gi|119386674|ref|YP_917729.1| SufBD protein [Paracoccus denitrificans PD1222]
gi|119377269|gb|ABL72033.1| SufBD protein [Paracoccus denitrificans PD1222]
Length = 448
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDG 136
R+ ++Q L + P +DE +R+TD + +++ +P+ + + + T + +LV +DG
Sbjct: 44 REDAAQRLQAMGLPGARDEYWRYTDPAPFNAARPEPVEFGADASTLFTGIERLNLVFVDG 103
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------FWSINGMGAP 190
+A ++ ++ +GV + SL + + F +N + A
Sbjct: 104 RFDAAASDVLDV-EGVEIESLAAAEAAADHWAAGLYGRLETAGQVPVKRPFAVLNTLAAA 162
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV--VVLVEEGGEVGIIEEFV 248
+ GV+ G KVE P+++ Y + P ++ + VV +EEG E+ ++E
Sbjct: 163 E-GVLIRVTG-KVERPVHITY---------RRSAPDADVYLHHVVKLEEGAELTLLE--- 208
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRH 274
G +N V+E +G+G + H
Sbjct: 209 --SGAIGARSNVVIEADLGRGARFHH 232
>gi|288801641|ref|ZP_06407083.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302344948|ref|YP_003813301.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
gi|288335683|gb|EFC74116.1| FeS assembly protein SufD [Prevotella melaninogenica D18]
gi|302149228|gb|ADK95490.1| FeS assembly protein SufD [Prevotella melaninogenica ATCC 25845]
Length = 447
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P++K E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRQGFPTKKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P+L FI N +LP DGV V SL V+ + V+ +
Sbjct: 78 DTFKCDVPNLSTSLYFIVNDQFYSKSLPKAKLNDGVIVDSLNHVATERPELVAKYYGRLA 137
Query: 177 C--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ++N M A D IYVP ++E I + +++ +VD + N RV+++
Sbjct: 138 NTEADAITALNTMLAQDGLFIYVPKNVQLERTI--QVINILRSDVD----LMVNRRVLIV 191
Query: 235 VEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQ 278
+EEG + + F +D + A V+E +G + + L+
Sbjct: 192 LEEGAKAQFL--FCDHAADDRNFLATQVIEAYVGANANLELNCLE 234
>gi|373459363|ref|ZP_09551130.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
gi|371721027|gb|EHO42798.1| FeS assembly protein SufD [Caldithrix abyssi DSM 13497]
Length = 441
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 110/243 (45%), Gaps = 37/243 (15%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTD----------------TSMIKSSQIQPITR 115
PL ++R ++ + + + P+ +DE +RFT+ + QIQP
Sbjct: 25 PLHQVRKAALEFVSQSGLPTSRDEEWRFTNPKPFFETEFRLAEKAAGEALSIEQIQPF-- 82
Query: 116 PSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF---- 171
+ + + +LV ++G+ ++ D V + SL ++ + +
Sbjct: 83 ------LYNNFEGITLVFVNGYFMPHLSTMAESNDRVQISSLNHALSNKVELLPELNEKA 136
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
++EF ++F ++N D +I VP ++ PI + L++ G ++ I N
Sbjct: 137 VNEF---NVFSALNAAFFSDGIIIEVPDHTVLKVPINV--LNIAMGQGETVNNVIRN--- 188
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTA 291
V+ V E + +IE F+ ++ ++ N++ V + KV HS++QN++ NA H+
Sbjct: 189 VIKVGEHSFLRVIETFLSF-SDEPHFTNALTVVSVSNHAKVIHSHIQNENENAYHVGNVL 247
Query: 292 VRQ 294
V+Q
Sbjct: 248 VQQ 250
>gi|371775946|ref|ZP_09482268.1| FeS assembly protein SufD [Anaerophaga sp. HS1]
Length = 464
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 37/246 (15%)
Query: 52 LAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L E ++ SSS + L LR+ + + L PS K E +++T+ S
Sbjct: 18 LFEENRQTIEDSSSKV-----LNNLREQALEAFLKLGIPSNKVENYKYTNLQPYFSGDFS 72
Query: 112 -PITRPSS--------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ P S DV T F ++ + N+ L LP+GV VGSL ++
Sbjct: 73 FSLNAPDFTGRMEDIFSCDVETLDSFTIFIVNGWYYSNNGSAL--LPEGVRVGSLAALA- 129
Query: 163 GIMKRVSDFISEFQCGDLFW------SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
K F+ ++ + W ++N M A D I++P G VE PI + + +
Sbjct: 130 ---KEDPSFVEKYYGKNAPWLSDGLVALNTMFARDGFYIHIPKGVVVEKPIQVVNILL-- 184
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE--GNDCYWANSVLEVVIGKGGKVRH 274
S++ ++N R ++++EE E ++ V +D + N+V E + ++ +
Sbjct: 185 ----SEEPLMTNQRNLIVLEENSEARVL---VCDHTLSSDRFVVNNVTEGFVAPNARLDY 237
Query: 275 SYLQNQ 280
LQNQ
Sbjct: 238 YNLQNQ 243
>gi|390954259|ref|YP_006418017.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
gi|390420245|gb|AFL81002.1| Iron-regulated ABC transporter permease protein SufD [Aequorivita
sublithincola DSM 14238]
Length = 437
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 21/253 (8%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D L SS +L L PL +R+ + + +P++K+E +++T + +
Sbjct: 2 SFKDKLLSSYIALEDYLEFDSPLHDVRNGAIKIFEEQGFPTKKEEAWKYTSLNSLLKPDY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLS--NLPDGVYVGSLLGVS 161
+ +++ Q+ LV +DG + NS L+ + + D + + L S
Sbjct: 62 SVYSNKERHVELQDVRQYFLHEIDTYKLVFVDG-VYNSFLSETTHDTLDVCLMSAALNKS 120
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + ++ D S+N + I +PA +VE PI + ++ GN +
Sbjct: 121 -KYKPVIEAYFNKVAKSDSLTSLNTAFTKEGAYINIPAHKEVEKPIEI--INFSTGNEAA 177
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
L PR +++V E V IIE N+ NSV E+ K V + +QN
Sbjct: 178 MFLQ---PRNLIVVGENAHVQIIERHQSLSSNEV-LTNSVTEIFAEKRAYVDYYKIQNDE 233
Query: 282 LNAAHIKWTAVRQ 294
A+ I T + Q
Sbjct: 234 ATASLIDNTYISQ 246
>gi|269837553|ref|YP_003319781.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
gi|269786816|gb|ACZ38959.1| FeS assembly protein SufD [Sphaerobacter thermophilus DSM 20745]
Length = 443
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 28/238 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS 123
SS +P +++ R ++ + + P P+R DE +R TD + + P P+ +D S
Sbjct: 20 SSLRGEPDWVREKRLAAWEAYEAIPMPTRTDEEWRCTDIRRLPIGDVAPYATPNGRVD-S 78
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV---SDGIM--------KRVSDFI 172
A P + + G + A L+ D V S L G++ ++ D +
Sbjct: 79 VAALQPEVAAVLGDEERRA-GLTVQVDSSSVFSELSADLAEQGVIFCDLATAIEKYPDLV 137
Query: 173 SEFQCGDL-------FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ + F +++G +YVPAG +VE P++ + + G V
Sbjct: 138 KQHFMTEAVPVDDNKFAALHGAFWSGGTFVYVPAGVQVEVPLWAQVYAHAGVGV------ 191
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
P +V+ E+G V +I+ + + ++ A V+E++ + +VR+ LQ+ N
Sbjct: 192 --FPHTLVVAEQGASVVVIDAWNSETSDEPTIAAGVVEIIAREEAQVRYIQLQDWGRN 247
>gi|327313029|ref|YP_004328466.1| FeS assembly protein SufD [Prevotella denticola F0289]
gi|326945567|gb|AEA21452.1| FeS assembly protein SufD [Prevotella denticola F0289]
Length = 447
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIATEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G + L+ L H K T V
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNAR-----LELNCLEETHAKNTRV 243
Query: 293 RQLVV 297
+ +
Sbjct: 244 SNVYI 248
>gi|88706201|ref|ZP_01103908.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
gi|88699595|gb|EAQ96707.1| FeS assembly protein SufD [Congregibacter litoralis KT71]
Length = 435
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALN 144
P+R+ E +++T ++++ + S +LD D LV +DG Q SAL+
Sbjct: 37 PTRRTENWKYTGLNVLRDDY--HLADGSLTLDALPDKWAAGCGGTRLVFVDGIYQ-SALS 93
Query: 145 LSNLPDGVYVGSLLGVSDGIMKRVSDFIS-EFQCGD-LFWSINGMGAPDLGVIYVPAGCK 202
+ DGV V + +++ ++ D LF ++N D ++ + A
Sbjct: 94 TAASADGVRVCRFEDADEEQSAKIAGHLNGALNVEDHLFAALNTATLRDGVLVEIAANTA 153
Query: 203 V-ENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
E PI +L V + P + N R++VL E G ++E F + + N
Sbjct: 154 ADEAPIECLWL------VSAVDAPTAANQRLLVLAESGASATVVEHFASLDDAKDSFCNG 207
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+ E+++G ++ H + +S +A HI R
Sbjct: 208 LTELMLGPNARLSHYRIHEESGSAVHIGGVHAR 240
>gi|408674679|ref|YP_006874427.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
gi|387856303|gb|AFK04400.1| FeS assembly protein SufD [Emticicia oligotrophica DSM 17448]
Length = 443
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 49/249 (19%)
Query: 71 LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS 130
LP+ +LR + + +PS + E +++++ S + + D T F
Sbjct: 33 LPVHQLRGEAMKNFEKLGFPSIRHEEWKYSNVSNL----------VKQTFDFHTKTDFNQ 82
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVS----------------------DGIMKRV 168
L + N N+ +GVY L + +G +
Sbjct: 83 SDLDKIALPNLTGNVLYFINGVYSAELSQIVSPDNKLKVLPFAEALAQQPELIEGHFAKY 142
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-S 227
+++ + D F ++N + D V+ V VE PI L++++ D++ S
Sbjct: 143 ANYET-----DAFTALNTALSHDGVVVQVADNKIVEEPIILRFIT------DARTANAGS 191
Query: 228 NPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
PR +V+V + +V I E + VG+E + N+V E+V+ + V + +QN+S +
Sbjct: 192 QPRNLVVVGKNSQVKIAEAYRTVGEE---AAFVNTVTEIVVAESAMVDYYKVQNESDKSY 248
Query: 286 HIKWTAVRQ 294
HI T V Q
Sbjct: 249 HIGTTQVYQ 257
>gi|338174481|ref|YP_004651291.1| hypothetical protein PUV_04870 [Parachlamydia acanthamoebae UV-7]
gi|336478839|emb|CCB85437.1| UPF0051 protein slr0076 [Parachlamydia acanthamoebae UV-7]
Length = 434
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 26/235 (11%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
ES SL + ++ L+K+R + L P+ +++ FR+ + +
Sbjct: 10 ESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELGLPTPRNDVFRYVPLRKLFAHTYATA 69
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P+ LD + A F + LV ++G+ S ++S LP V V L + ++
Sbjct: 70 LTPA--LDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPL----EQAVR 123
Query: 167 RVSDFISE------FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
F++ + D F ++N D +Y+P +VE PI + + +D
Sbjct: 124 SFGAFLTNQWGKTLMEETDPFATLNAAIHTDGIFVYIPPRLQVEKPIQILEI------MD 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
++ +S PR+ V E+ ++ +G YW N V + I + VR++
Sbjct: 178 TEVPFMSMPRLHFFVGAQSELNVLST-LGSLSGSTYWVNQVADFSIEEQAHVRYT 231
>gi|332141973|ref|YP_004427711.1| cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
gi|327551995|gb|AEA98713.1| Cysteine desulfurase activator SufB [Alteromonas macleodii str.
'Deep ecotype']
Length = 418
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ----IQPITRPSSSLDVSTDAQF 128
L +R + L + WP+R++E +RFT + I+ + +Q P ++D +
Sbjct: 18 LSPVRQQALAQLKADGWPARRNESWRFTPLTPIEKREAKQAVQADNLPVPAID---NLNA 74
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ-CGDLFWSINGM 187
L+ +DG + + +N ++P G+ + SL + +S + + +F +N
Sbjct: 75 IDLIFVDGVLV-TQVNTLDVPVGMSITSLNSDDAATQQAISSVYGKVKPSRHMFGLVNDA 133
Query: 188 GAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEF 247
I V AG K++ P+ + +++ NVD ++ RVVV V EG +IE+
Sbjct: 134 LCQHGIFINVEAGVKIDTPV--RIVNMASQNVD------AHTRVVVKVAEGASATVIEQG 185
Query: 248 VG 249
G
Sbjct: 186 FG 187
>gi|227539029|ref|ZP_03969078.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
gi|227241085|gb|EEI91100.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33300]
Length = 446
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 116/261 (44%), Gaps = 29/261 (11%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-S 103
+D QL + ++ +S + + L KLR + +P+ K+E +++T+ S
Sbjct: 18 ADSLFQQLVDGFQEQENAS-----ETVALTKLRQDAFDKFRQVGFPTVKNEDWKYTNVHS 72
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLL 158
++ + + LD S A P L VL++G L S+L + + + ++
Sbjct: 73 LVNKTYVLNPDVDIDGLDFSK-ADIPDLDAHRIVLVNG---QYILAFSSLEEEIGL-TVK 127
Query: 159 GVSDGIMKRVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ D + +FI+ F + + F ++N I V G ++ PI++ +++
Sbjct: 128 PIDDAAQE--GNFITHFAHYADKTQNPFVALNTALYTSGLYIDVAKGKTLQKPIHIVHVA 185
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVR 273
+ + R ++++E E IIE F+ +G+ N V E+V+ + K++
Sbjct: 186 TGAEDF------FTQTRNLIVLEPHAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQ 239
Query: 274 HSYLQNQSLNAAHIKWTAVRQ 294
H YLQ + + ++ T V Q
Sbjct: 240 HYYLQVSASVSHYLNHTEVYQ 260
>gi|426401808|ref|YP_007020780.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
gi|425858476|gb|AFX99512.1| feS assembly protein SufD [Candidatus Endolissoclinum patella L2]
Length = 431
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 95 EPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN-LSNLPDGVY 153
E +RFT+ + K+ ++PI S+++ +S F L ++ I N L + +P+ +
Sbjct: 45 EAWRFTNLNAFKA--LEPIAANSTAI-LSCPKVFAELNALELHISNGILTWIDAVPEYI- 100
Query: 154 VGSLLGVSDGIMKRVS-DFISEFQCGDL------FWSINGMGAPDLGVIYVPAGCKVENP 206
L +D +R++ ++ E + F +IN + + G ++ P
Sbjct: 101 --DLFDFAD---RRITPTWVIEAFGSTINTKMHPFTAINTTAFSGGVAMRIRKGAVMKKP 155
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
I L + G K+ NPRV+V++EE +IE G + Y N V E+VI
Sbjct: 156 IILLVDTQANG-----KIVAVNPRVLVVLEEDAVADLIEIHTG---SGVYINNVVTELVI 207
Query: 267 GKGGKVRHSYLQNQSLNAAHIKWTAVR 293
GK + H LQ + +A HI A R
Sbjct: 208 GKNSHISHYKLQAEDTDAFHIAMNAAR 234
>gi|325856465|ref|ZP_08172154.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
gi|325483434|gb|EGC86407.1| FeS assembly protein SufD [Prevotella denticola CRIS 18C-A]
Length = 447
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYTKALPKTKLNDGIIVDSLNRIAAEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G + L+ L H K T V
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNAR-----LELNCLEETHAKNTRV 243
Query: 293 RQLVV 297
+ +
Sbjct: 244 SNVYI 248
>gi|302801848|ref|XP_002982680.1| hypothetical protein SELMODRAFT_421987 [Selaginella moellendorffii]
gi|300149779|gb|EFJ16433.1| hypothetical protein SELMODRAFT_421987 [Selaginella moellendorffii]
Length = 278
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 53 AESLEDSLPSSSSSLPQP-LPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
AE LEDS + + L + LRD S++ ++ WPS KDE RFT+ +K+S+I
Sbjct: 170 AEKLEDSASKGAGEERRTNLVSKALRDGSAEVAVTCKWPSSKDEAHRFTNVKFLKNSEIL 229
Query: 112 PI 113
P+
Sbjct: 230 PL 231
>gi|218294673|ref|ZP_03495527.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
gi|218244581|gb|EED11105.1| FeS assembly protein SufB [Thermus aquaticus Y51MC23]
Length = 468
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFREYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G K R++ +QN S N
Sbjct: 256 GAKSRYTTIQNWSTN 270
>gi|333982946|ref|YP_004512156.1| FeS assembly protein SufD [Methylomonas methanica MC09]
gi|333806987|gb|AEF99656.1| FeS assembly protein SufD [Methylomonas methanica MC09]
Length = 433
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 32/236 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD--AQFP- 129
LQ+ R + + +P+ +DE +R+T+ +++ + + PS + DV D A +
Sbjct: 29 LQQFRSEGLKAFETHGFPNPRDEEWRYTNLAVLNKT----LFAPSDNQDVDADWLAAYRL 84
Query: 130 ----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL----- 180
S+VL++G + LS LP V V S VS + S + E + G
Sbjct: 85 ENAWSVVLVNGRFSAALSRLSGLPAAVSVQS---VSTALRNNPS--VLETRLGKAVGNDE 139
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
+ N D VI + A ++ P+ + + V + ++ R + ++E+G
Sbjct: 140 HSLVAFNSAWFADGVVIEIAANQRLAKPLQIVH-------VVTSPDALAASRNLFVLEQG 192
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E I+E ++G + Y++ +V E + + + S +Q ++ A H T V+Q
Sbjct: 193 AEAEIVETYIGSAAS--YFSAAVNECFLEQNAGLTLSKMQVEADKACHFGGTYVKQ 246
>gi|224025202|ref|ZP_03643568.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
gi|224018438|gb|EEF76436.1| hypothetical protein BACCOPRO_01936 [Bacteroides coprophilus DSM
18228]
Length = 450
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 89 WPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
+P+RK E +++TD + + + P + +V P++ F+ N A +
Sbjct: 45 FPTRKQEDYKYTDVGRYFAPDYGLNLNRLEIPVNPYEVFK-CDVPNMSTSLYFVVNDAFD 103
Query: 145 -----LSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
++LP+GV GSL ++ + + + + D + N + A D V+YV
Sbjct: 104 RHDSPTASLPEGVEFGSLCEIATRRPELIKKYYAHLADTSEDALAAFNTLFAQDGVVMYV 163
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG-IIEEFVGKEGNDCY 256
P G VE PI L +++ +V + + N R+++++EEG + +I + E N +
Sbjct: 164 PKGVVVERPIQL--VNILRADVAT----LVNRRLLIILEEGAQAKLLICDHAMDEVN--F 215
Query: 257 WANSVLEVVIGKGGKV 272
+ V EV +G+ +
Sbjct: 216 LSTQVAEVFVGENASL 231
>gi|440230704|ref|YP_007344497.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
gi|440052409|gb|AGB82312.1| Iron-regulated ABC transporter permease protein SufD [Serratia
marcescens FGI94]
Length = 424
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 23/212 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q L WP+RK E +++T + + Q + S + + P LV +DG
Sbjct: 36 QQALRLGWPTRKHENWKYTPLDGLLAQQFHAPQPATVSAERCAELALPLDAYRLVFVDGR 95
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
Q +LS+ G Y L G + E ++F + AP+ +I +
Sbjct: 96 YQ---ADLSDADLGDYQLELTGYQ----------LPEPIQPEIFLHLTESLAPESSLIRL 142
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
PAG P+YL L + G + ++ + R + V G + +IE +V ++
Sbjct: 143 PAGKVAARPLYL--LHISSGRSGAGEINSVHHRHHLEVAAGAQAEVIEHYVSL-NEHAHF 199
Query: 258 ANSVLEVVIGKGGKVRHSYL--QNQ-SLNAAH 286
+ L +G ++ H L +NQ S + AH
Sbjct: 200 TGARLTATVGDNAQLHHCKLAFENQPSYHFAH 231
>gi|89889830|ref|ZP_01201341.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
gi|89518103|gb|EAS20759.1| ABC-type transport system involved in Fe-S cluster assembly
[Flavobacteria bacterium BBFL7]
Length = 437
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 27/256 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQ----KLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D + SS +L + + +LR+ + + P RK+E +++T + +
Sbjct: 2 SFKDKILSSFIALENEVDTETYAHQLRNEALASFEELGIPQRKEEAYKYTSLKSLFNKDY 61
Query: 111 QPITRPSSSLDV---------STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ S+++ DA ++ IDG + +LS + L+ +
Sbjct: 62 SLFPKKESAIEYGDIKPYLIHQIDAY--RVIFIDGIYSS---HLSETTHDKFDVCLMSSA 116
Query: 162 DGIMKR---VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
K + + ++ D S+N A + I + VE PI + Y S GN
Sbjct: 117 LNNPKYSPVIEAYYNKLAPKDGLTSLNTAFAREGAYISIGKNTAVEKPIEVVYFST--GN 174
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
+ ++ PR +V+V E +V IIE N NSV E+ K V + +Q
Sbjct: 175 ---ESTLMTQPRNLVVVGENSQVQIIERHQSLSDNQV-LTNSVTEIFADKRAMVDYYKIQ 230
Query: 279 NQSLNAAHIKWTAVRQ 294
N LNA+ I T+V Q
Sbjct: 231 NDHLNASLIDHTSVEQ 246
>gi|56459263|ref|YP_154544.1| cysteine desulfurase [Idiomarina loihiensis L2TR]
gi|56178273|gb|AAV80995.1| Cysteine desulfurase activator SufB [Idiomarina loihiensis L2TR]
Length = 416
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ----------PITRPSSSLDV 122
L +R + TL WP+R+ E +R+T + +++ P+ +SLD
Sbjct: 19 LSPVRAQALDTLKQQQWPTRRTEAWRYTSLHPVADLELKSSTGNATAEAPVIEGLNSLD- 77
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS---DGIMKRVSDFISEFQCGD 179
LV +DG + L LP+G+ + L S + I +V
Sbjct: 78 --------LVFVDGQLSTDISKLK-LPEGITISELSAPSEPAEAIFAQVKP------SRH 122
Query: 180 LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
LF +N + A VI + AG KVE PI + + G S+ R +V V E
Sbjct: 123 LFGLVNDVLAQQGVVIDIAAGAKVEQPIRIVNFASAGIE--------SHQRTLVRVGENA 174
Query: 240 EVGIIEEFVGKEGNDCYWANSVL-EVVIGKGGKVRHSYLQNQSLNAAHI 287
+ IIE G GN N+V E I + ++ H A HI
Sbjct: 175 QATIIEHGSGS-GNSL---NTVFAEYDIAEKARLEHYRFALHEGEAIHI 219
>gi|325269678|ref|ZP_08136291.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
gi|324988046|gb|EGC20016.1| ABC superfamily ATP binding cassette transporter permease
[Prevotella multiformis DSM 16608]
Length = 447
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
L ++RD + + +P RK E +++TD +Q + P L+++
Sbjct: 26 LNEVRDKAFEDFRRLGFPDRKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVNPY 77
Query: 125 ---DAQFPSLVLIDGFIQN-----SALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFIS 173
P+L FI N AL + L DG+ V SL ++ ++++ I+
Sbjct: 78 ETFKCDVPNLSTSLYFIVNDQFYAKALPKTKLNDGIIVDSLNRMATEHPELVRKYYGRIA 137
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+ D ++N M A D IYVP ++E + + +++ +VD + N RV++
Sbjct: 138 HTE-ADAVTALNTMLAQDGLFIYVPKNVQMERTV--QVVNILRSDVD----LMVNRRVLI 190
Query: 234 LVEEGGEVGIIEEFVGKEG-NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
++EEG + + F N + A V+E +G + L+ L H K T V
Sbjct: 191 VLEEGAKAQFL--FCDHAADNRNFLATQVIEAFVGDNAR-----LELNCLEETHAKNTRV 243
Query: 293 RQLVV 297
+ +
Sbjct: 244 SNVYI 248
>gi|298387897|ref|ZP_06997446.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
gi|298259304|gb|EFI02179.1| FeS assembly protein SufD [Bacteroides sp. 1_1_14]
Length = 447
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++Q P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V+ + V F + D + N A D + YV
Sbjct: 101 NKALPKTHLPEGVIFGSLKEVAAEHPELVKKFYGKLADTSKDGITAFNTAFAQDGVIFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVIVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|219847880|ref|YP_002462313.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
gi|219542139|gb|ACL23877.1| FeS assembly protein SufD [Chloroflexus aggregans DSM 9485]
Length = 404
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 191 DLGVIYVPAGCKVENPIYLKY-LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
D +YVP G +E P+ L Y L +G + PR +V+VE V +IEEF
Sbjct: 124 DGAFLYVPKGVAIEVPLRLIYTLGTDGVAI--------FPRTLVIVEPQASVTLIEEFTS 175
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +A + E+ +G G VR +Q+ H+
Sbjct: 176 PDLRAGSFAGPITEIFVGDGASVRFISIQHWGRGVYHL 213
>gi|386819500|ref|ZP_10106716.1| FeS assembly protein SufD [Joostella marina DSM 19592]
gi|386424606|gb|EIJ38436.1| FeS assembly protein SufD [Joostella marina DSM 19592]
Length = 438
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 16/254 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + P+ +R + + +P++KDE +++T + +
Sbjct: 1 MELKDKLISSFMAFENRVDVEHPVHDIRTEAIKFFEEKGFPTKKDEAWKYTSLKTLLKND 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGV 160
+ S+L+ D +V IDG I +S L+ ++ D + S L
Sbjct: 61 YSVFPKEESALEFKDVKKYFIHDIDSYKIVFIDG-IYSSHLSQTSHEGLDVCLMSSALSK 119
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ + F + D S+N + + I +P G V+ PI + +L+ G
Sbjct: 120 PKYQLIIENYFNKIAKTDDSLTSLNTAFSREGAFINIPKGKVVDKPIQIIHLAT--GKES 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
S L PR +V+V E V IIE N N+V E+ K G V + +QN
Sbjct: 178 SIML---QPRSLVVVGENAHVQIIERHQSLTDNPV-LTNAVTEIFTHKRGIVDYYKIQND 233
Query: 281 SLNAAHIKWTAVRQ 294
+ NA+ I T + Q
Sbjct: 234 NPNASLIDNTYISQ 247
>gi|373460673|ref|ZP_09552424.1| FeS assembly protein SufD [Prevotella maculosa OT 289]
gi|371955291|gb|EHO73095.1| FeS assembly protein SufD [Prevotella maculosa OT 289]
Length = 447
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS-------SQIQPITRPSSSL--DVS 123
L +RD + + +P+RK E +++TD + + ++++ P + DV
Sbjct: 26 LNAVRDRAFADFKAQGFPTRKVERYKYTDIPALFAPDYGLNLNRLEIPLNPYDTFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD---GIMKRVSDFISEFQCGDL 180
+ V+ D F N L + LP+GV V SL V+ G++ I++ + D
Sbjct: 86 NLSTSLYFVVNDSFY-NKMLPQAGLPEGVIVDSLGHVATQKPGLIAEYYARIADTR-EDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D +YVP K++ I + +++ +VD + N RV++++E+G E
Sbjct: 144 ITALNTMFAQDGLFVYVPKHVKIDRAI--QVINILRADVD----LMVNRRVLIVMEQGAE 197
Query: 241 VGIIEEFVGKEG-NDCYWANSVLEVVIGKGGK-----VRHSYLQNQSLNAAHIKWTA 291
+ F N + + V+E + + + ++L+N L+ +I+ A
Sbjct: 198 AKFL--FCDHAADNRKFLSTQVIEAYVAENASLELNCLEETHLKNTRLSNVYIEQQA 252
>gi|451979728|ref|ZP_21928141.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
gi|451763097|emb|CCQ89338.1| putative Iron-sulfur cluster assembly protein SufD [Nitrospina
gracilis 3/211]
Length = 438
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 35 LQTTFPQATFSDPFVIQL-AESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRK 93
+ TT + S+ V+ L E L+DS P+ L+ L ++ + + +P RK
Sbjct: 1 MSTTLDVISESEQAVLDLHKEFLKDSDPA----------LKPLNEAGIRRFEAVKFPHRK 50
Query: 94 DEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-----LVLIDGFIQNSALNLSNL 148
E + F +T + ++ Q ++ A +PS +V ++G N S L
Sbjct: 51 HEMYTFVNTHDLTETRFQLTGHAAADAKEVQAAVYPSCQDRVIVFVNGVYDEKLSNTSGL 110
Query: 149 PDGVYVGSLL-GVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
V + L+ + D ++ E + D+F ++N A D V+ V +E P+
Sbjct: 111 EAEVKITPLVQAIQDEAVQEYLLATVE-EENDVFAALNSGFAKDGLVVSVAEKAVIEKPL 169
Query: 208 YLKYLS--VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
+ Y+S + G V S+PR++V ++ E + +F+G+ Y+ N+V + +
Sbjct: 170 QVLYVSTGTDNGTV------ASHPRLLVKLQPRAEFKLAVKFIGQGAG--YFVNAVQDFL 221
Query: 266 I 266
+
Sbjct: 222 V 222
>gi|381186652|ref|ZP_09894222.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
gi|379651496|gb|EIA10061.1| iron-sulfur cluster assembly protein SufD [Flavobacterium frigoris
PS1]
Length = 438
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 18/255 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R S+ + + +P++KDE +++T + I +
Sbjct: 1 MDLKEKLVSSFMAFEERIDVHSELHDVRTSAIKNFENKGFPTKKDEAWKYTSLNAILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ S++ S ++ +V IDG + +S L+ S +G+ V + ++
Sbjct: 61 FTVFPKTESNIQYSDVQKYFLHEVDTYKVVFIDG-VFSSHLS-STTHEGIDVCLMASALT 118
Query: 162 DGIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D F D S+N A + I +P + PI + Y S
Sbjct: 119 KPKYKMVIDTYFNQIANKDDSLTSLNTAFAIEGAYINIPKSKVADKPIEIMYFST----- 173
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
S+ ++ PR +V+V E V IIE N NSV E+ K V +QN
Sbjct: 174 GSEAALMTQPRNLVIVGENSHVQIIERHQSLNDNPV-LTNSVTEIFAQKRAIVDFYKIQN 232
Query: 280 QSLNAAHIKWTAVRQ 294
+L A I T V Q
Sbjct: 233 DNLTANLIDNTYVSQ 247
>gi|333379412|ref|ZP_08471135.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
gi|332885278|gb|EGK05529.1| hypothetical protein HMPREF9456_02730 [Dysgonomonas mossii DSM
22836]
Length = 446
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP-----ITRP--SSSLDVSTD 125
+ LRD + +P++K E + + D + ++ P I R + + V+
Sbjct: 25 MNGLRDKALNIFKDQGFPTKKMEDYLYLDVA----AEFLPDFALNINRLPFTGNPYVAFR 80
Query: 126 AQFPSLVLIDGFIQNSALNLS-----NLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCG 178
+ P+L F+ N + N P GV+VGS ++ D S++ Q
Sbjct: 81 CEIPNLTTNLYFVLNDIFHEEHKPKINYPSGVFVGSFKHFAE----EKPDVFSKYYGQIA 136
Query: 179 DL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D+ + N M A D VIYVP G VE PI L + N+ + N R++++
Sbjct: 137 DMDNNGIVAFNTMFAQDGFVIYVPKGVVVEEPIQLINILKSEFNI------LVNRRILII 190
Query: 235 VEEGGEVG-IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
E+ +V +I + E + A V E+ G+ + + L+ S + T V
Sbjct: 191 AEDDAQVKLLICDHTVDESQ--FLATQVTEIFAGRNALIDYYDLEENSDKVTRLTNTFVH 248
Query: 294 QL 295
QL
Sbjct: 249 QL 250
>gi|294675013|ref|YP_003575629.1| FeS assembly protein SufD [Prevotella ruminicola 23]
gi|294472044|gb|ADE81433.1| FeS assembly protein SufD [Prevotella ruminicola 23]
Length = 451
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDV 122
P + +RD + + +P++K E +++TD + +++Q P +
Sbjct: 23 PESMNVVRDQAFEDFRKQGFPTKKVERYKYTDMQKLFEPDYGVNLNRLQIPVDPYEAFHC 82
Query: 123 STDAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
SL + D F + +LP+GV +GS+ + + K + + D
Sbjct: 83 DVPNLSTSLYFVVNDMFYHDDKQK-GHLPEGVVIGSMRDYPELVSKYYTKLAKTGE--DA 139
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPI-YLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEG 238
++N M A D ++YVP KV+ I + L N + N RV++++EE
Sbjct: 140 VTALNTMLAQDGLLVYVPKNVKVDRAIQVINILKATPQNAQHVVTDLMVNRRVLIVLEES 199
Query: 239 GEVGIIEEFVGKEGND-CYWANSVLEVVIGKGG 270
E+ ++ F +D + A V+E +G+
Sbjct: 200 AEIKML--FCDHAADDRNFLATQVIEAYVGENA 230
>gi|345868944|ref|ZP_08820907.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
gi|344046428|gb|EGV42089.1| feS assembly protein SufD [Bizionia argentinensis JUB59]
Length = 437
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 17/254 (6%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + P+ +R + +T + +P +K+E +++T +
Sbjct: 1 MELKDKLVTSFMAFEDRIDVDSPVHDIRSEAMKTFEADGFPGKKNEDWKYTSLKSVLKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ + +D D +V +DG + S+ +G+ V + +
Sbjct: 61 YSVFPKQENHIDYQAVKKYFIHDIDTYKIVFVDG--KYSSYLSETTHEGIDVCLMSSALN 118
Query: 163 GIMKR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
R + ++ ++ D S+N + + I++P V PI + + + GN
Sbjct: 119 KPKYRLIIENYFNKIAGKDSITSLNTAFSQEGAYIHIPKNKLVAKPIQIIHFAT--GNES 176
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++V+E V IIE N NSV E+ K V + +QN
Sbjct: 177 ALMLQ---PRNLIVVDENSHVQIIERHQSLTDNPV-LTNSVTEIYSNKRAIVDYYKIQND 232
Query: 281 SLNAAHIKWTAVRQ 294
+ NA+ I T V Q
Sbjct: 233 NENASLIDNTFVNQ 246
>gi|397689345|ref|YP_006526599.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
gi|395810837|gb|AFN73586.1| Fe-S cluster assembly protein SufD [Melioribacter roseus P3M]
Length = 447
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
L+K+R++S +P+ K+E +++TD S + ++ P+ PS T + LV
Sbjct: 33 LKKMRETSLAKFSEFDFPTNKNEEWKYTDVSFARKNKFNPL--PSERKTGYTKDEIKKLV 90
Query: 133 ----------LIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LF 181
++G ++S D + +G+L G + + +++ + D LF
Sbjct: 91 FGGFDYNLITFVNGRYSAELSDISEDGDKIIIGNLNGFIESHGEIAGNYLGKISSEDNLF 150
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++NG+ D V+ + ++ P L+ L + G D ++ + PR +++ +
Sbjct: 151 HALNGVYMQDGVVVVLKENSELSKP--LQALFING---DPEENLLIAPRNLIVAGKNSRA 205
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI-KWTAVRQ 294
+I + G + Y+ + + E+++ + + +Q ++ ++ HI K A+++
Sbjct: 206 SVIFNYYGG-SKESYFTDGITEIMLEEDSLIDVYKIQRENPSSYHIEKLQAIQK 258
>gi|384432017|ref|YP_005641377.1| FeS assembly protein SufB [Thermus thermophilus SG0.5JP17-16]
gi|333967485|gb|AEG34250.1| FeS assembly protein SufB [Thermus thermophilus SG0.5JP17-16]
Length = 468
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|291295172|ref|YP_003506570.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
gi|290470131|gb|ADD27550.1| FeS assembly protein SufB [Meiothermus ruber DSM 1279]
Length = 469
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KVE P+ Y + + E G + R +++V+EG EV IE
Sbjct: 190 VYVPKGVKVELPLQAYFRVNTAELGQFE---------RTIIVVDEGAEVHYIEGCTAPTY 240
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ + V+E+V+ +G K R++ +QN S N
Sbjct: 241 TTDSFHSGVIEIVVNQGAKSRYTTIQNWSHN 271
>gi|381191357|ref|ZP_09898867.1| SufB protein membrane protein [Thermus sp. RL]
gi|380450717|gb|EIA38331.1| SufB protein membrane protein [Thermus sp. RL]
Length = 468
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|297565449|ref|YP_003684421.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
gi|296849898|gb|ADH62913.1| FeS assembly protein SufB [Meiothermus silvanus DSM 9946]
Length = 468
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KVE P+ Y + + E G + R +++V+EG E+ IE
Sbjct: 189 VYVPKGVKVELPLQAYFRVNTAELGQFE---------RTIIIVDEGAEMHYIEGCTAPTY 239
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ + + V+E+V+ KG + R++ +QN S N
Sbjct: 240 STDSFHSGVIEIVVKKGARSRYTTIQNWSHN 270
>gi|260061112|ref|YP_003194192.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
gi|88785244|gb|EAR16413.1| FeS assembly protein SufD [Robiginitalea biformata HTCC2501]
Length = 455
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 18/256 (7%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
+ L + L S + + + P+ +R + + S +P RK E +++T + ++
Sbjct: 17 TMDLKDKLLASFMAFENQVDMDHPVHDIRSEAIRNFESKGFPHRKMEAWKYTSLAPLQKV 76
Query: 109 QIQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS 161
+ S+LD Q+ +V IDG I +S L+ DGV + +
Sbjct: 77 DFSLFPKEDSTLDYREVKQYFLHEVDTYKIVFIDG-IYSSYLS-ETTHDGVDICLMSAAL 134
Query: 162 DGIMKR--VSDFISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+ M R + + ++ + ++N + IY+P P+ + +LS GN
Sbjct: 135 NKPMYRPIIDVYFNKVASREESLTTLNTAFTREGAYIYIPKNKAPRKPVEILHLST--GN 192
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
S L PR +++VEE E+ +IE N+ NSV E+ K V + +Q
Sbjct: 193 EASLLL---QPRNLIVVEENAELQVIERHQSLTSNEV-LTNSVTEIFAAKDAIVDYYKVQ 248
Query: 279 NQSLNAAHIKWTAVRQ 294
A+ I T + Q
Sbjct: 249 TDRPTASLIDNTYIDQ 264
>gi|325842531|ref|ZP_08167702.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
gi|325489575|gb|EGC91939.1| FeS assembly protein SufB [Turicibacter sp. HGF1]
Length = 473
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPI 207
G + +D +K+ D E+ + ++ N A + V IYVP G K+E P+
Sbjct: 147 AGVIFMDTDSALKQYPDLFKEYFGKVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPL 206
Query: 208 --YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
Y + + G + R +++V+EG ++ +E + ++V+E+
Sbjct: 207 QSYFRINTESMGQFE---------RTLIIVDEGADIHYVEGCTAPTYSADSLHSAVVEIY 257
Query: 266 IGKGGKVRHSYLQNQSLN-------------AAHIKW 289
I KGG+ R+S +QN S N AH++W
Sbjct: 258 IRKGGRCRYSTIQNWSNNILNLVTKRAVCEDYAHMEW 294
>gi|333908821|ref|YP_004482407.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
gi|333478827|gb|AEF55488.1| FeS assembly protein SufD [Marinomonas posidonica IVIA-Po-181]
Length = 419
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-DAQFPSLVLID 135
R + L +T WP+RK E +R+T ++ S + + R S V+ + LV ++
Sbjct: 23 RAQALDILANTQWPTRKTEAWRYTPLKAVERSSAKALDRVSGLTPVAIPNVSAIELVFVN 82
Query: 136 GFIQNSAL-NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC----GDLFWSINGMGAP 190
G Q AL + LP G+ V LG D ++ ++ + F LF +N + A
Sbjct: 83 G--QFDALQSTKTLPTGLTVQ--LG-QDLSSQQQAEALRSFSNVKPERHLFGLVNDVLAS 137
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEE 246
D+ ++ V K+ P+ + L G S+ RV+V +E+G ++ +IE+
Sbjct: 138 DVLLVTVAESIKIAEPLRISSLLSAGAE--------SHTRVLVRLEKGAQLAVIED 185
>gi|46199790|ref|YP_005457.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
gi|46197417|gb|AAS81830.1| ABC transporter ATP-binding protein [Thermus thermophilus HB27]
Length = 468
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|293375292|ref|ZP_06621574.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
gi|292646048|gb|EFF64076.1| FeS assembly protein SufB [Turicibacter sanguinis PC909]
Length = 473
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPI 207
G + +D +K+ D E+ + ++ N A + V IYVP G K+E P+
Sbjct: 147 AGVIFMDTDSALKQYPDLFKEYFGKVISYADNKFSALNSAVWSGGSFIYVPKGVKIEKPL 206
Query: 208 --YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVV 265
Y + + G + R +++V+EG ++ +E + ++V+E+
Sbjct: 207 QSYFRINTESMGQFE---------RTLIIVDEGADIHYVEGCTAPTYSADSLHSAVVEIY 257
Query: 266 IGKGGKVRHSYLQNQSLN-------------AAHIKW 289
I KGG+ R+S +QN S N AH++W
Sbjct: 258 IRKGGRCRYSTIQNWSNNILNLVTKRAVCEDYAHMEW 294
>gi|55981808|ref|YP_145105.1| SufB protein membrane protein [Thermus thermophilus HB8]
gi|55773221|dbj|BAD71662.1| SufB protein (membrane protein) [Thermus thermophilus HB8]
Length = 468
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|386361339|ref|YP_006059584.1| FeS assembly protein SufB [Thermus thermophilus JL-18]
gi|383510366|gb|AFH39798.1| FeS assembly protein SufB [Thermus thermophilus JL-18]
Length = 468
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +YVP G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|363582469|ref|ZP_09315279.1| FeS assembly protein SufD [Flavobacteriaceae bacterium HQM9]
Length = 437
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 99/252 (39%), Gaps = 13/252 (5%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L E L S + + + + +R + ++ +P++K E +++T + + +
Sbjct: 1 MELKEKLVSSFLAFEAEVDTTNDIHDIRTEAIKSFEKYGFPTKKLEAWKYTSLNSVLKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ + ++ Q+ +V IDG + ++ V + S D
Sbjct: 61 FSLFPKKEAVIEFKDVKQYFISDLDSYKIVFIDGVYSSHLSGTTHDKIDVCLMSSALTQD 120
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + ++ D S+N A + IY+P + PI + + + +
Sbjct: 121 RFKAVIDVYYNKIAKEDGLVSLNTAYAREGAYIYIPKNTAADKPIQIIHFAT-----GLE 175
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+ + PR +++ E+ EV IIE + NSV E+ GK V + +QN +
Sbjct: 176 QASMLQPRNLIVAEDNTEVTIIERHQNLSDKKVF-TNSVTEIYTGKNAHVDYYKIQNDTD 234
Query: 283 NAAHIKWTAVRQ 294
A I T Q
Sbjct: 235 TATLIDNTFAEQ 246
>gi|407892711|ref|ZP_11151741.1| hypothetical protein Dmas2_01215 [Diplorickettsia massiliensis 20B]
Length = 402
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 21/232 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKS---SQIQPITRPSSSLDVSTDAQFP 129
L + R S+ L +P RK +++T S + S P++ + +L +
Sbjct: 5 LTEQRQSALARLTEMGFPDRKHAAWKYTPLSSLLGKPFSATDPLSAATQTLVLEKSTSDY 64
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL------FWS 183
LV +DGF ++ ++ LP GV +GSL +++ +SE + + F
Sbjct: 65 RLVFVDGFFISTLSTIAPLPPGVQIGSL----ATFLQQSPTLVSEQKINPIQRDSNSFID 120
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
+N D I V ++ PI L +++ D +PI N + + + +
Sbjct: 121 LNTAFLQDGAYIDVAENIQLSAPIELVFIA----TCDLGFIPIRNR---IQLGPSSQAVV 173
Query: 244 IEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+E+++ E C + N V E + ++ H L +L + H+ V Q
Sbjct: 174 VEKYLSLTEKPLCTFTNVVTECTLENQSQLEHYKLIRDTLTSFHLGHLCVNQ 225
>gi|282892126|ref|ZP_06300601.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498021|gb|EFB40365.1| hypothetical protein pah_c207o063 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 434
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 26/235 (11%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI 113
ES SL + ++ L+K+R + L P+ +++ FR+ + +
Sbjct: 10 ESFHSSLEEAFRNVAGDPLLKKIRQKAWDHFLELGLPTPRNDVFRYVPLRKLFAHTYATA 69
Query: 114 TRPSSSLDVSTDAQFPS-------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
P +LD + A F + LV ++G+ S ++S LP V V L + ++
Sbjct: 70 LTP--ALDKAKIADFIAPECIHSVLVFVNGYYVPSLSDISGLPTKVVVTPL----EQAIR 123
Query: 167 RVSDFISE------FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
F++ + D F +N D +Y+P +VE PI + + +D
Sbjct: 124 SFGAFLTNQWGKTLMEETDPFAILNAAIHTDGIFVYIPPRLQVEKPIQILEI------MD 177
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
++ +S PR+ V E+ ++ +G YW N V + I + VR++
Sbjct: 178 TEVPFMSMPRLHFFVGAQSELNVLST-LGSLSGSTYWVNQVADFSIEEQAHVRYT 231
>gi|316934378|ref|YP_004109360.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
gi|315602092|gb|ADU44627.1| FeS assembly protein SufD [Rhodopseudomonas palustris DX-1]
Length = 437
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 100/248 (40%), Gaps = 20/248 (8%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQ 111
++ D+ ++ + LP L + R + P R+ E +++TD SM + +
Sbjct: 12 DTASDNFAAAGARLPVAGKLDETRRQALDVFQRIGLPHRRIEDWKYTDLRASMREVLPVA 71
Query: 112 P------ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
P + R ++ + A LVL+DG + +L+ L G+ + SL +
Sbjct: 72 PAPDASALVRAEAAAGLHAIAGVRRLVLVDGALAPGLSDLAGLEAGLSIRSLREA----L 127
Query: 166 KRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ D + D ++N D VI V G + P+++ +++ G P
Sbjct: 128 QSGDDCVLSLDTADPMAALNTALMTDGVVIEVADGTTLARPLHILHIASGGA-------P 180
Query: 226 ISN-PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
++ R + + + ++E +V EG Y + + +G ++ + + S A
Sbjct: 181 VAMFTRSRIALGKDAAATVVESYVAGEGAGSYQVHDAAVIAVGDYARLDYVRIVEDSREA 240
Query: 285 AHIKWTAV 292
+I AV
Sbjct: 241 FNITSAAV 248
>gi|443243238|ref|YP_007376463.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
gi|442800637|gb|AGC76442.1| ABC-type transport system involved in Fe-S cluster assembly
[Nonlabens dokdonensis DSW-6]
Length = 437
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 29/257 (11%)
Query: 55 SLEDSLPSSSSSLPQPLP----LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
S +D + SS +L + + LR + P RK+E +++T + + +
Sbjct: 2 SFKDHILSSFIALENEVDTNSYVHNLRSEAINEFEKLGIPQRKEETYKYTSLKSVFNKEY 61
Query: 111 QPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP--DGVYVGSLLGVS 161
+ S++ S ++ ++ IDG I +S L+ + D + S L
Sbjct: 62 SLFPKKESAISYSDIKKYLVHQIDSYRVIFIDG-IYSSHLSQTTHDKFDVCLMSSALN-- 118
Query: 162 DGIMKRVSDFISEF----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ SD I E+ D S+N A + I + VE PI + Y S G
Sbjct: 119 ---NPKYSDVIKEYYNRLAVKDGLVSLNTAFAKEGAYINIGKNIVVEKPIEIVYFST--G 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
N D ++ PR +V+ E +V IIE N NSV E+ K V +
Sbjct: 174 NEDQ---LMTQPRNLVVAGENSQVQIIERHQSLSDN-AVLTNSVTEIFSAKRALVDWYKI 229
Query: 278 QNQSLNAAHIKWTAVRQ 294
QN L+A+ I T V Q
Sbjct: 230 QNDHLSASLIDHTFVEQ 246
>gi|441500737|ref|ZP_20982891.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
gi|441435578|gb|ELR68968.1| Iron-sulfur cluster assembly protein SufD [Fulvivirga imtechensis
AK7]
Length = 444
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 108/257 (42%), Gaps = 33/257 (12%)
Query: 54 ESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQ 111
E+LE L +S+ LP+ ++R + P+ ++E +++TD ++ K+ +
Sbjct: 18 EALEKRLNGASA-----LPIHQVRKKAINAFQELGLPTARNEEYKYTDLKKALQKTFDFK 72
Query: 112 PITRPSSSLDVST---------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+ P ++ T DA L+ I+G N + + D + + L +
Sbjct: 73 APS-PQGKINRETIEECLIPGLDANI--LIFINGVFSNELSTIISPEDQLTIKDLEAATM 129
Query: 163 GIMKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS-VEGGNV 219
+ + ++ +++ D F ++N I++P VE PI L + + + G
Sbjct: 130 EDKELIDNYFAQYANYEHDAFIALNTAFTEHGSFIHIPDNKLVEKPIALYFFNDAQAGK- 188
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ PR + +V + + +E F VGK + + N V E+V+ + + +
Sbjct: 189 -----SYNQPRNLFIVGKSSQATFLEVFYTVGKHES---FTNIVSEIVVNENANAEYYKI 240
Query: 278 QNQSLNAAHIKWTAVRQ 294
QN A H+ T V Q
Sbjct: 241 QNNRDTAFHVGTTQVWQ 257
>gi|320449481|ref|YP_004201577.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
gi|320149650|gb|ADW21028.1| FeS assembly protein SufB [Thermus scotoductus SA-01]
Length = 468
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|149369533|ref|ZP_01889385.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
gi|149356960|gb|EDM45515.1| iron-regulated ABC transporter, membrane-spanning permease
[unidentified eubacterium SCB49]
Length = 437
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 28/251 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT--DTSMIKSSQIQP 112
+ ED+L + S PL LR ++ + +PS+K+E +++T ++ + K I P
Sbjct: 13 AFEDNLKADS-------PLYDLRSNALKVFEEKGFPSKKEENWKYTSLNSLLKKDYCISP 65
Query: 113 ITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM 165
+ + ++ Q+ +V IDG + +S L+ DG+ V L D
Sbjct: 66 --KGDTDIEFKNVKQYFLHNVDTYKVVFIDG-VYSSYLS-ETTHDGIDVCLLSSAFDKSK 121
Query: 166 KR--VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
R + + ++ + +N + I++P + + PI + Y S GN +
Sbjct: 122 YRPVIESYFNKAAKKEGLTQLNTAFTKEGAFIHIPKNKEADKPIEIIYFST--GN---EA 176
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
PR +++ +E V IIE N N+V E+ K V + +QN +
Sbjct: 177 TLFVQPRNLIIADENAHVQIIERHQSLSSN-AVLTNAVTEIFADKRAMVDYYKIQNDTPE 235
Query: 284 AAHIKWTAVRQ 294
A+ + T ++Q
Sbjct: 236 ASLVDSTYIKQ 246
>gi|408372893|ref|ZP_11170592.1| ABC transporter permease [Alcanivorax hongdengensis A-11-3]
gi|407767245|gb|EKF75683.1| ABC transporter permease [Alcanivorax hongdengensis A-11-3]
Length = 408
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 84 LLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSAL 143
L +T +P RK E +++T + + + + L A S+V I+ N L
Sbjct: 33 LEATRFPERKTERWKYTSVQALADGHLNAVA--AGDLRQPLPALSESVVTIN----NGEL 86
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
S+LPDGV + G+ + +++ V+ V A ++
Sbjct: 87 VTSSLPDGVTLHHNAPAVAGL--------------ETPFAVYNSAVARAVVLEVAANTRI 132
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
E PI+++ + S NPRV+V + G E +IE + G EG N+V
Sbjct: 133 EQPIHVQIQAA------SDAPAHCNPRVIVKLNNGAEATVIEHYHG-EGQ--ALTNAVTA 183
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHI 287
++ + H LQ ++ + HI
Sbjct: 184 LITADNAHLTHYRLQGEAASTLHI 207
>gi|390565474|ref|ZP_10246130.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
gi|390171290|emb|CCF85465.1| FeS assembly protein SufD [Nitrolancetus hollandicus Lb]
Length = 449
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 45/256 (17%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF 128
+P +++ R ++ + P PSR DE +R TD + + P T + V++ A+
Sbjct: 30 EPEWVREKRLAAWDAFEAIPMPSRTDEEWRRTDIRRLPIDAVAPYTGIAGK--VNSVAEL 87
Query: 129 PS---------------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG---------I 164
P+ V +D + LN GV L D +
Sbjct: 88 PADVTAALAEDERRSGLTVQVDSNSVYADLNADLAGQGVIFTDLATAIDQHPDLVKQYFM 147
Query: 165 MKRVSDFISEFQC-GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ V + S+F FWS +YVPA VE P++ V G ++ S
Sbjct: 148 TRAVPNEDSKFAALHGAFWSGGTF-------VYVPANTHVEIPLHAH---VYGQSLGSSI 197
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
LP ++++ EEG V +++ + G D A+ V+E+ + +VR+ +Q+ +
Sbjct: 198 LP----HMLIVAEEGASVVVVDSWASPTGTDPLLASGVVEIFAKEASQVRYIQVQDWGRS 253
Query: 284 AAHIKWTAVRQLVVMS 299
A W Q V+S
Sbjct: 254 A----WNFTTQRAVIS 265
>gi|384440329|ref|YP_005655053.1| Fe-S cluster assembly ABC transporter permease [Thermus sp.
CCB_US3_UF1]
gi|359291462|gb|AEV16979.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Thermus sp. CCB_US3_UF1]
Length = 468
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFKEYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|383762991|ref|YP_005441973.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383259|dbj|BAM00076.1| protein SufD [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 424
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 34/257 (13%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
+ + S++ +P + + R ++ + PWP DE +R T + + +P+ P+
Sbjct: 1 MRAHSAARNEPEWMLEFRLNAWRQFEQMPWPQPTDESWRRTRLTGFDLNNFKPLAVPTGL 60
Query: 120 LDVSTDAQF-----------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV---SDGIM 165
++ ++F S+V D ++N LN + G+ L ++
Sbjct: 61 VEKGELSKFLQDELNEMDSAASMVFEDSGLRNRILNTNLDEHGIIFTDLQSAVLKHPELV 120
Query: 166 KRVSDFISEFQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+R F++E D F +++ +YVPA +V P+ + G
Sbjct: 121 RRY--FMTEAVKPDHNKFTALHAALWDTGSFVYVPARARVTLPLQVILNQCTPG------ 172
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVG-KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S +V+ EEG EV ++++ +G K+G SV+E+++G G VR+ LQ
Sbjct: 173 -VGSYHHTLVVAEEGAEVTVVDDLLGAKDGLQA----SVVELILGPGSVVRYMNLQ---- 223
Query: 283 NAAHIKWTAVRQLVVMS 299
+ H W + VM+
Sbjct: 224 DFEHSAWNFLTGRAVMN 240
>gi|374374430|ref|ZP_09632089.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
gi|373233872|gb|EHP53666.1| Iron-regulated ABC transporter permease protein SufD [Niabella soli
DSM 19437]
Length = 434
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD-----------TSMIKSSQIQPITRPSSSLD 121
L+ LRD + T P+ K E +++T T+ IK Q Q L
Sbjct: 23 LKTLRDGAFNAFEQTGIPTIKHEEWKYTRINDFFNKDYHFTTDIKEKQFQAAELKPFLLP 82
Query: 122 VSTDAQFPSLVLIDGFI--QNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD 179
+A +V I+G ++S L L ++ +S+ + + + +
Sbjct: 83 GHEEANV--IVFINGHYHPEHSVLRSEELE-------IISLSEAAQNQYAAIVEQHLGHS 133
Query: 180 LFWSINGMGAPDLGVI------YVPAGCKVENPIYLKYLS-VEGGNVDSKKLPISNPRVV 232
+ +G+ A + I ++ G V +P+Y+ ++ GN+ + PR +
Sbjct: 134 ADYHKDGINALNTAFIQEGVFVHIQKGKTVNHPVYIYNVTDARSGNI------FAQPRAL 187
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
V V E +V ++E F G D + N V E+V+ +G + +QN + N+ + T V
Sbjct: 188 VHVGENAQVEMLETF-ATVGADESFTNQVFEIVVEEGAVLNLCKIQNDAPNSTIVSTTHV 246
Query: 293 RQL 295
Q+
Sbjct: 247 HQV 249
>gi|383317248|ref|YP_005378090.1| FeS assembly protein SufD [Frateuria aurantia DSM 6220]
gi|379044352|gb|AFC86408.1| FeS assembly protein SufD [Frateuria aurantia DSM 6220]
Length = 440
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK-----SSQIQPITRP-SSSLDV 122
+P L LR Q+L+ P + E +++T + S + +RP ++L
Sbjct: 24 EPAWLIALRQQYRQSLIEDGMPGPRSEAWKYTSLRALAQRRFASHDAEAASRPMDAALWQ 83
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVY---VGSLLGVSDGIMKRVSDFISEFQCGD 179
+ PSLV ++G + L LP+G+ V ++L G + D
Sbjct: 84 IPGLEGPSLVFVNGVFRADLSMLDGLPEGLTLEPVSAVLAEGRGDELKALWEGESLAAAD 143
Query: 180 LFWSINGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
+ +N GA GV + V AG +E+P+ L +++ + L R +V VEEG
Sbjct: 144 IMRRLNA-GAAREGVRLRVAAGAVIESPVRLVHIATPASEDQAWHL-----RHLVQVEEG 197
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
++ ++E+ + S L V +G
Sbjct: 198 AQLQLVEQHLSAGAQQHLATVSSLHQVAARG 228
>gi|332881714|ref|ZP_08449362.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357044641|ref|ZP_09106290.1| putative FeS assembly protein SufD [Paraprevotella clara YIT 11840]
gi|332680353|gb|EGJ53302.1| putative FeS assembly protein SufD [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355532448|gb|EHH01832.1| putative FeS assembly protein SufD [Paraprevotella clara YIT 11840]
Length = 447
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL---- 120
+ LRD + + +P++K E +++TD + ++++ P +
Sbjct: 25 AMNALRDKAFEDFTRQGFPTQKVERYKYTDVPAAFAPDYGLNLNRVEFSVNPYEAFRCDV 84
Query: 121 -DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-- 177
++ST F V+ D F + S L + LP+GV V SL ++ RVS +
Sbjct: 85 PNLSTSLYF---VVNDAFYRKS-LPAAALPEGVVVCSLKQAAEDYPDRVSACYGKLARTE 140
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
D ++N M D IYVP G VE L+ +++ +VD ++N RV+V++EE
Sbjct: 141 KDAINALNTMLVQDGLFIYVPRGVVVERT--LQVVNILRSDVD----LMANRRVLVVLEE 194
Query: 238 GGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
+ ++ F +D + V+EV + + L+ L H+K
Sbjct: 195 NAQARLL--FCDHAMDDRNFLTTQVVEVFAAENAR-----LELYELEETHVK 239
>gi|29348817|ref|NP_812320.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|383124992|ref|ZP_09945651.1| FeS assembly protein SufD [Bacteroides sp. 1_1_6]
gi|29340723|gb|AAO78514.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides thetaiotaomicron VPI-5482]
gi|251840857|gb|EES68938.1| FeS assembly protein SufD [Bacteroides sp. 1_1_6]
Length = 447
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++Q P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLQIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V+ + V + + D + N A D + YV
Sbjct: 101 NKALPKTHLPEGVIFGSLKEVAAEHPELVKKYYGKLADTSKDGITAFNTAFAQDGVIFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVIVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|328543979|ref|YP_004304088.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
gi|326413723|gb|ADZ70786.1| FeS assembly protein SufD [Polymorphum gilvum SL003B-26A1]
Length = 440
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQ 109
Q L + S +SL + LR+++ T P R+ E +++TD + +K +
Sbjct: 11 QAETDLAEQFERSRTSLAGGAEIAALRNAAFDRFSQTGLPHRRVEEWKYTDLRAYMKGAA 70
Query: 110 --IQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQNSALNLSNL-PDGVYVGSLLGVS 161
P+T ++ + D + LVL +G + +L+ L GV V ++
Sbjct: 71 PLADPVTAQAAGPALEAADAYGGLERFRLVLANGRLVAELSDLNALDAAGVTVRD---IN 127
Query: 162 DGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
DG+ SD QC G+ +N + V AG +V+ P+ + +L+V
Sbjct: 128 DGLAN--SDAAKLLQCPAIAQGNALVDLNTALVQGGVTVAVEAGRRVDKPVEIVHLTVGA 185
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEF--VGKEGNDCYWANSVLEVVIGKGGKVRH 274
G S R + + EG E+ ++E F VG G N+V + +GKG +
Sbjct: 186 G--------ASFSRCRIALGEGAELTLLESFASVGAGGE----TNAVSDYDLGKGAILAS 233
Query: 275 SYLQNQSLNAAHIKWTAVR 293
L + + + AH+ + R
Sbjct: 234 VRLMSGAGSHAHVSTSFAR 252
>gi|282881111|ref|ZP_06289798.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
gi|281304915|gb|EFA96988.1| FeS assembly protein SufD [Prevotella timonensis CRIS 5C-B1]
Length = 447
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL--DVS 123
+ +R+ + + +PSRK E +R+TD + + ++++ P ++ DV
Sbjct: 26 MNHVREQAFKDFKQQGFPSRKIERYRYTDINALFEPNYGLNLNRLEIPVDPYAAFKCDVP 85
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF---ISEFQCGDL 180
+ V+ D F AL LPDGV V SL S + V+ + I++ Q D
Sbjct: 86 NLSTSLYFVVNDAFY-TKALPKVGLPDGVKVLSLREASMEMPDLVAKYYGQIAKTQ-EDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
++N M A D IYV G +++ + + +++ +VD + N RV++++EEG +
Sbjct: 144 LTALNAMLAQDGLFIYVSKGVQMDRAV--QVINLLRSDVD----LMVNRRVLIVMEEGAQ 197
Query: 241 VGIIEEFVGKEGNDC-YWANSVLEVVIGKGG 270
+ F +D + A V+E +G+
Sbjct: 198 AKFL--FCDHTIDDHRFLATQVIEAYVGENA 226
>gi|86134637|ref|ZP_01053219.1| FeS assembly protein SufD [Polaribacter sp. MED152]
gi|85821500|gb|EAQ42647.1| FeS assembly protein SufD [Polaribacter sp. MED152]
Length = 437
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
D S+N A + IY+P +V+ PI + ++ G S+ + PR +++VEE
Sbjct: 137 DNLTSLNTAFASEGAYIYIPKNIEVQKPIQI--INFTTG---SEPATMIQPRNLIVVEEN 191
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
V IIE N +N V EV K V + +QN + NA+ + T V Q
Sbjct: 192 SHVQIIERHQSLTSN-AVLSNVVTEVFAAKSATVDYYKIQNDNTNASLVDNTYVNQ 246
>gi|325286420|ref|YP_004262210.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
gi|324321874|gb|ADY29339.1| FeS assembly protein SufD [Cellulophaga lytica DSM 7489]
Length = 455
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 24/254 (9%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + P+ +R + + + +PS+K+E +++T + ++
Sbjct: 20 LKDKLVSSFLAFENNVDVHNPVHDVRTEAIKNFETKGFPSKKEEAWKYTSLNSLQKIDFS 79
Query: 112 PITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLP-DGVYVGSL-LGVSD 162
+ SSL+ ++ +V +DG + NLS DGV + + ++
Sbjct: 80 IFPKKESSLEYKDVKKYFIHQIDTYKIVFVDGVYSS---NLSETTHDGVDICLMSAALTK 136
Query: 163 GIMKRVSD--FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
+ K V D F D ++N + + IY+P + PI + + S GN
Sbjct: 137 PMYKAVIDVYFNKVASKDDSLTTLNTAFSREGAYIYIPKNKVPKKPIEIIHFST--GNDA 194
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++ EE E+ IIE N+ N V E+ K V + +QN
Sbjct: 195 ALMLQ---PRNLIIAEENSEMQIIERHQSLTSNEV-LTNCVTEIFAAKNAIVDYYKVQND 250
Query: 281 SLNAAHIKWTAVRQ 294
+A+ I T V Q
Sbjct: 251 VDSASLIDNTYVDQ 264
>gi|300770537|ref|ZP_07080416.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
gi|300763013|gb|EFK59830.1| FeS assembly protein SufD [Sphingobacterium spiritivorum ATCC
33861]
Length = 446
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 29/261 (11%)
Query: 45 SDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT-S 103
+D QL + ++ +S + + L KLR + +P+ K+E +++T+ S
Sbjct: 18 ADSLFQQLVDGFQEQKNAS-----ETVALTKLRQDAFDKFRQVGFPTVKNEDWKYTNVHS 72
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLL 158
++ + + LD S A P L +L++G L S+L + + + ++
Sbjct: 73 LVNKTYVLNPDVDIDGLDFSK-ADIPDLDAHRIILVNG---QYVLAFSSLEEEIGL-TVK 127
Query: 159 GVSDGIMKRVSDFISEF-QCGDL----FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLS 213
+ D + +F + F Q D F ++N I V G ++ PI++ +++
Sbjct: 128 PIDDAAQE--GNFSAHFAQYADKTQNPFVALNTALYTSGLYIDVAKGKALQKPIHIVHVA 185
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVR 273
+ + R ++++E E IIE F+ +G+ N V E+V+ + K++
Sbjct: 186 TGAEDF------FTQTRNLIVLEPNAEAEIIESFITLDGSAKNVQNKVTEIVVQENAKLQ 239
Query: 274 HSYLQNQSLNAAHIKWTAVRQ 294
H YLQ + + ++ T V Q
Sbjct: 240 HYYLQVSASVSHYLNHTEVYQ 260
>gi|309790995|ref|ZP_07685535.1| FeS assembly protein SufD [Oscillochloris trichoides DG-6]
gi|308226968|gb|EFO80656.1| FeS assembly protein SufD [Oscillochloris trichoides DG6]
Length = 402
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
D +YVP G +E P+ + Y DSK+ PR +V++EE +IEEF+
Sbjct: 122 DGAFLYVPKGVAIERPLRVCYTLA-----DSKQAIF--PRTLVILEEQASATLIEEFISH 174
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ + A + E+ G G +R +Q+ HI
Sbjct: 175 DHAEPALAGPISEIFAGPGSSLRFVSVQHWGAGVYHI 211
>gi|283782289|ref|YP_003373044.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
gi|283440742|gb|ADB19184.1| FeS assembly protein SufD [Pirellula staleyi DSM 6068]
Length = 443
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 87/247 (35%), Gaps = 31/247 (12%)
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
+ S + +S +P L LR + WP+R E + TD + K Q Q P
Sbjct: 18 QRSFEAFLASRNEPAWLVDLRRRWWDVFQTQSWPARNSEEWIRTDIRLFKPDQYQL---P 74
Query: 117 SSSLDVSTDAQ---------FPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKR 167
SL+ + Q S +D S L+ GV GSL D ++
Sbjct: 75 IGSLEAAETTQPLLNVGVQLAGSTSAVDSRPVKSILDPKWAAKGVVFGSL----DQLVHT 130
Query: 168 VSDFISEFQ-------CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
D I + D F S++ +YVP G ++ P+++ GG
Sbjct: 131 HGDLIRRYLFTEAMNPAYDRFASLHAACWSGGQFLYVPRGVVIDEPVHMLSALHHGG--- 187
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+V++EEG E ++ E D EV+ ++R LQN
Sbjct: 188 -----CDMGHTLVVLEEGAEATVLSETASHGEKDAGMHCGATEVIQRANSRLRLVSLQNW 242
Query: 281 SLNAAHI 287
L H
Sbjct: 243 GLGVWHF 249
>gi|150003926|ref|YP_001298670.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
gi|294775082|ref|ZP_06740611.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|319639843|ref|ZP_07994572.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|345518992|ref|ZP_08798425.1| FeS assembly protein SufD [Bacteroides sp. 4_3_47FAA]
gi|423312933|ref|ZP_17290869.1| FeS assembly protein SufD [Bacteroides vulgatus CL09T03C04]
gi|149932350|gb|ABR39048.1| conserved hypothetical protein, putative ABC transporter permease
component [Bacteroides vulgatus ATCC 8482]
gi|294451126|gb|EFG19597.1| FeS assembly protein SufD [Bacteroides vulgatus PC510]
gi|317388507|gb|EFV69357.1| hypothetical protein HMPREF9011_00169 [Bacteroides sp. 3_1_40A]
gi|345457304|gb|EET13935.2| FeS assembly protein SufD [Bacteroides sp. 4_3_47FAA]
gi|392686663|gb|EIY79965.1| FeS assembly protein SufD [Bacteroides vulgatus CL09T03C04]
Length = 447
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSS-----SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + + + P + DV + V+ D F +
Sbjct: 42 FPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVFKCDVPNMSTALYFVVNDAFYR 101
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
AL + LP+GV +GSL +S+ V + + D + N A D ++YV
Sbjct: 102 -KALPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P G V+ PI L +++ +V+ + N RV+V++EEG + ++
Sbjct: 161 PKGVVVDKPIQL--VNILRADVNF----MVNRRVLVVLEEGAQARLL 201
>gi|410696127|gb|AFV75195.1| FeS assembly protein SufB [Thermus oshimai JL-2]
Length = 468
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + +G MK+ D E+ + F ++N +Y+P G KVE P+ Y
Sbjct: 146 FVAIEEG-MKKYEDLFREYFAKVVPPEDNKFAALNSAAWSGGSFVYIPPGVKVELPLQAY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG EV IE + V+E+V+ +
Sbjct: 205 FRVNTPEFGQFE---------RTLIIVDEGAEVHYIEGCTAPMYSTESLHTGVIEIVVKR 255
Query: 269 GGKVRHSYLQNQSLN 283
G + R++ +QN S N
Sbjct: 256 GARSRYTTIQNWSTN 270
>gi|407695025|ref|YP_006819813.1| ABC transporter permease [Alcanivorax dieselolei B5]
gi|407252363|gb|AFT69470.1| Permease component of ABC-transporter [Alcanivorax dieselolei B5]
Length = 418
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 44/231 (19%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS-- 130
L LR S L + +P RK E +++T + P+T L + D P
Sbjct: 29 LAPLRGDSLSALEAAVFPDRKTEQWKYTS--------LHPLT--DGHLSTAADGALPEPL 78
Query: 131 -------LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWS 183
LV+ +G +Q + LS LP+GV + G D ++ F
Sbjct: 79 PNLAAHRLVMSNGRLQEA---LSQLPEGVTLRRQAGQRDELLTP-------------FAL 122
Query: 184 INGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI 243
NG D + V A +V P++L + S RV VL+ G ++ +
Sbjct: 123 YNGAALTDAITLEVAANTEVSAPLHLLL------HAASDAPAHCQTRVEVLLNPGSKLTL 176
Query: 244 IEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IE ++G+ N+V + + H LQ++ + HI RQ
Sbjct: 177 IEHYIGQ---GPVLNNAVTVIEARDNASLTHYRLQSEREDTLHISTLLFRQ 224
>gi|320104748|ref|YP_004180339.1| SufBD protein [Isosphaera pallida ATCC 43644]
gi|319752030|gb|ADV63790.1| SufBD protein [Isosphaera pallida ATCC 43644]
Length = 463
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 33/251 (13%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPI---- 113
D+L + +P R ++ + + TP P+ +DE +R TD +K Q P+
Sbjct: 15 DALAAFLEGRDEPSWFGDRRRAAFERFIQTPLPTLRDEEWRRTDLRGLKLDQFGPVAGGP 74
Query: 114 TRPSSSLDVS---------TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
PS +L S A+F + DG + LP GV L
Sbjct: 75 ASPSEALSASPAWSTLAETHGAEF-GVHHRDGRPATHPASAPELPAGVVFTDLATA---- 129
Query: 165 MKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
+KR D I D F + +YVP G K+++P++ G
Sbjct: 130 LKRHPDLIQRHLGHAIDTQADAFALLQSAFVSGGVALYVPQGVKLDHPLFHLIELGPDGR 189
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV--LEVVIGKGGKVRHSY 276
D +V++E+G E I+E + D A V +E+ +G+ K+R
Sbjct: 190 SDFNH-------TLVILEKGAEATFIQETASTQRPDKTPALHVGAVELFVGERAKLRFVN 242
Query: 277 LQNQSLNAAHI 287
+QN H
Sbjct: 243 IQNWDRQTWHF 253
>gi|409199078|ref|ZP_11227741.1| ABC transporter permease [Marinilabilia salmonicolor JCM 21150]
Length = 463
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 38/250 (15%)
Query: 50 IQLAESLED---SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK 106
I LAE ++ ++ S SSS+ L LRD + PS K E +++T+ +
Sbjct: 13 ISLAELFDENRAAIESHSSSV-----LNSLRDEAFDAFQELGIPSNKVENYKYTNLQPLF 67
Query: 107 SSQIQPITRPSS---------SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL 157
S +P + S DV T ++ L++G+ N LP G+ +GS+
Sbjct: 68 SGDFTFSLKPETLTENLEDIFSCDVDT-LDSITIYLVNGWYYTRN-NPGVLPKGLVIGSM 125
Query: 158 LGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKY 211
++ K D I ++ D + N M A D ++VP G VE PI +
Sbjct: 126 AQMA----KENPDLIEKYYGTRAPHLSDGAVAFNTMFAQDGFFVHVPKGVAVERPIQIVN 181
Query: 212 LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGI-IEEFVGKEGNDCYWANSVLEVVIGKGG 270
+ + S+ ++ R +V++E+ E I + + G + NSV E +GK
Sbjct: 182 ILM------SEDALMTTQRNLVVMEDNSEARIMVCDHTLTTGK--FVMNSVTEGYVGKDA 233
Query: 271 KVRHSYLQNQ 280
++ LQNQ
Sbjct: 234 RLDLYNLQNQ 243
>gi|309790998|ref|ZP_07685538.1| FeS assembly protein SufB [Oscillochloris trichoides DG-6]
gi|308226971|gb|EFO80659.1| FeS assembly protein SufB [Oscillochloris trichoides DG6]
Length = 675
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVPAG KV+ P+ Y + + G + R ++++EEG E IE
Sbjct: 396 VYVPAGVKVDIPLQAYFRINAESMGQFE---------RTLIIIEEGAEAHYIEGCTAPIY 446
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ ++V+E++I KGGK R++ +QN + N
Sbjct: 447 STNSLHSAVVEIIIKKGGKFRYTTIQNWANN 477
>gi|159896939|ref|YP_001543186.1| FeS assembly protein SufB [Herpetosiphon aurantiacus DSM 785]
gi|159889978|gb|ABX03058.1| FeS assembly protein SufB [Herpetosiphon aurantiacus DSM 785]
Length = 472
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G KV+ P+ Y + N+ + R +++V+EG EV IE +
Sbjct: 193 VYVPKGVKVDIPL-QAYFRINAENMGQFE------RTLIIVDEGAEVHYIEGCTAPVYST 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E++I KGGK R++ +QN + N
Sbjct: 246 NSLHSAVVEIIIKKGGKCRYTTIQNWANN 274
>gi|90021063|ref|YP_526890.1| Iron-regulated ABC transporter permease SufD [Saccharophagus
degradans 2-40]
gi|89950663|gb|ABD80678.1| Iron-regulated ABC transporter permease protein SufD
[Saccharophagus degradans 2-40]
Length = 439
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 38/245 (15%)
Query: 72 PLQKLRDSSSQ---TLLSTPWPSRKDEPFRFTDTSMIKSSQI--------QPITRPSSSL 120
PL L+D + Q L +P+RK E +++T+ ++ P P
Sbjct: 15 PLTWLQDKTQQGKQAWLGHRFPTRKTENWKYTNLRALEQGDYLRAANIGAAPEALPQHLT 74
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF----ISEFQ 176
+A LV ++G +++L D + ++ G+ + SD I+E Q
Sbjct: 75 IAGLEA--VKLVFVNGQF------VASLSDDLARANVAGLELTLFSNASDAQKKAINE-Q 125
Query: 177 CGDLF----WSINGMGAPDL--GV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
G L + +G+ L GV I V +V PI++ +++ ++ + P
Sbjct: 126 LGQLVNSTKYEFSGLNTAQLNDGVYINVAKNQQVAKPIHIVWMTT------AQDSAFTVP 179
Query: 230 -RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
R++V +E G +IE+FV + + +SV E +G+ +++H LQ + +A HI
Sbjct: 180 HRLLVNLETGASACVIEQFVSGDEAQNSFTHSVSEFNVGENARLQHYRLQQEQEDAIHIG 239
Query: 289 WTAVR 293
VR
Sbjct: 240 GVFVR 244
>gi|85710908|ref|ZP_01041969.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
gi|85695312|gb|EAQ33249.1| Cysteine desulfurase activator SufB [Idiomarina baltica OS145]
Length = 415
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 49 VIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
VI+ A +++D L + L KL++ S WP R+ E +R+T +++
Sbjct: 8 VIERAAAVDDWLSPVRAE-----ALAKLKEQS--------WPGRRTEAWRYTSLHAVEN- 53
Query: 109 QIQPITRPSSSLDVSTDAQFPS--------LVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
++ P+ S + A+ P+ LV +DG + S L NLP+G+ + SL
Sbjct: 54 ----LSLPTES---NAQAEAPAIKGLDAIDLVFVDGRL-TSDLAALNLPEGLTIRSLTDK 105
Query: 161 SDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
SD I ++V F LF +N + A VI V A +E PI + ++ NV+
Sbjct: 106 SD-IAEQV--FTQVKPSHHLFGLVNDVLATQGIVIEVAANATIERPI--RVVNFATDNVE 160
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
S+ RV+V + + + +IE G
Sbjct: 161 ------SHTRVLVSLGDNAKATVIEHGSG 183
>gi|312129604|ref|YP_003996944.1| iron-regulated ABC transporter permease sufd [Leadbetterella
byssophila DSM 17132]
gi|311906150|gb|ADQ16591.1| Iron-regulated ABC transporter permease protein SufD
[Leadbetterella byssophila DSM 17132]
Length = 432
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP-RVVVLVEEGGEV 241
++N A V+YVPA +E P+ +K+++ DS+ L N + +V++ EV
Sbjct: 142 ALNVAFAQQGAVVYVPANATLEEPVLIKHIN------DSRNLEAFNAIHHLTVVDKNAEV 195
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++E F G + N+V E+ + + +V + +Q+++ + H+ T V Q
Sbjct: 196 KLVEIFQSV-GEQAAFTNAVSEIFVAEDARVDYYKIQDENDASYHVGTTQVVQ 247
>gi|383449388|ref|YP_005356109.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
gi|380501010|emb|CCG52052.1| Fe-S assembly protein, SufD [Flavobacterium indicum GPTSA100-9]
Length = 438
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + L ++R + + + +PS+K+E +++T + I
Sbjct: 1 MELKDKLVASFMAFEEKINDNAELHEVRSQAIKNFETKGFPSKKEEAWKYTSLNAILKHD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL-LGVS 161
+ ++++ D +V IDG + S+ S DG+ V L ++
Sbjct: 61 FSVFPKHENAIEFKDVKKYFLHDVDTYKVVFIDG--KFSSFLSSTTHDGLDVCLLSSALT 118
Query: 162 DGIMKRVSD-FISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D + ++ + ++N A + I+VP VE PI + Y S GN
Sbjct: 119 KPKYKMVIDTYFNQIASKEETLTTLNTAFAFEGAYIHVPKSKVVEKPIEIIYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +++V E V I+E N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLIIVGENAHVQIVERHQSLNSNPV-LTNSVTEIFAQKRAIVDYYKVQN 232
Query: 280 QSLNAAHIKWTAVRQ 294
L A + T + Q
Sbjct: 233 DVLTANLVDNTYIAQ 247
>gi|376317242|emb|CCG00611.1| FeS assembly protein SufD [uncultured Flavobacteriia bacterium]
Length = 437
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 21/253 (8%)
Query: 55 SLEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
SL+ L SS + L P+ +R + T +P++K+E +++T + I +
Sbjct: 2 SLKSKLVSSYLAFDDHLDDNSPIHDIRKKAIDTFEEKGFPTKKEEDWKYTSLNAIINKDY 61
Query: 111 QPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--S 161
++ + D +V IDG S+ DG+ V L V
Sbjct: 62 SISSKGDKEIKYEKVREYFLHDIDSYKVVFIDGVF--SSFLSETSHDGLDVCLLSSVLSK 119
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDS 221
+ + + ++ D S+N A + I +P +V+ PI + ++ GN
Sbjct: 120 EKYKAIIEAYYNKIASKDSITSLNTAFAKEGAYINIPNNKEVDKPIEI--INFSTGN--- 174
Query: 222 KKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
+ + PR +++V E V IIE N + NSV E+ K + +QN
Sbjct: 175 ETALMMQPRNLIIVGENAHVQIIERHQSLSDN-AVFTNSVTEIFAEKRAYLDFYKIQNDK 233
Query: 282 LNAAHIKWTAVRQ 294
NA+ I T + Q
Sbjct: 234 ENASLIDNTFIHQ 246
>gi|340028693|ref|ZP_08664756.1| SufBD protein [Paracoccus sp. TRP]
Length = 448
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTD 125
+LP+ + R+ ++Q L + P +DE +R+TD ++ +++ + S + T+
Sbjct: 33 TLPEGGFTRAAREDAAQRLQAMGLPGPRDEYWRYTDPALFNAARPEAAEIAGDSSTLFTE 92
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL----- 180
+ +LV +DG +A + +GV + +L + +
Sbjct: 93 IERLNLVFVDGRFDAAASDKLE-GEGVEIENLASAEGRADHWAAGLYGRLEAAGQQPVKR 151
Query: 181 -FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
F +N + A D GV+ G ++ P+++ Y VD+ +S VV L EEG
Sbjct: 152 PFAVLNTLTASD-GVLIRVTG-RIGRPVHITYHR---SAVDA---DVSLHHVVKL-EEGA 202
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRH 274
E+ ++E G +N VLEV +GKG + H
Sbjct: 203 ELTLLE-----TGAIGARSNVVLEVEVGKGARFHH 232
>gi|148261257|ref|YP_001235384.1| FeS assembly protein SufD [Acidiphilium cryptum JF-5]
gi|326404671|ref|YP_004284753.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
gi|146402938|gb|ABQ31465.1| Iron-regulated ABC transporter permease protein SufD [Acidiphilium
cryptum JF-5]
gi|325051533|dbj|BAJ81871.1| FeS assembly protein SufD [Acidiphilium multivorum AIU301]
Length = 399
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 30/201 (14%)
Query: 89 WPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDA-QFPSLVLIDGFIQNSALNLS 146
WP+++DE + +TD + ++ + P+ +++V+ + + P +V ++G + S
Sbjct: 33 WPTKRDEAWHYTDLAAGLRGFALG----PAPAVEVAAELPEGPRVVFVNGRFDAA---RS 85
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
PD V ++ D ++ G + ++N A D GV A +
Sbjct: 86 AAPDWV-------------SQLGDAAADPARGGVVVALNTALAED-GVAITLAPGQQGGT 131
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
++L L+ G + +P PR +++ G + +IE G Y V EV +
Sbjct: 132 LFLVALAAGRG----ETMPAIAPRHRIVLGAGATLTLIET---ARGEGSYLHAPVFEVDL 184
Query: 267 GKGGKVRHSYLQNQSLNAAHI 287
G G ++ H LQ++S A H+
Sbjct: 185 GAGARLNHYRLQDESAEAVHV 205
>gi|157370422|ref|YP_001478411.1| FeS assembly protein SufD [Serratia proteamaculans 568]
gi|157322186|gb|ABV41283.1| FeS assembly protein SufD [Serratia proteamaculans 568]
Length = 430
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 34/219 (15%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPIT---RPSSSLDVSTDAQFPSLVL 133
Q L WP+RK E +++T + Q ++P+T R + +LD+ DA LV
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPPLEPVTAAQRDALALDI--DAY--RLVF 91
Query: 134 IDGFIQNSALNLSNLPDGVY----VGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
IDG ++AL+ S L D + G+L + + I ++F + A
Sbjct: 92 IDGRF-SAALSDSELGDYQFDVAPYGTLQALPEPIQ------------AEIFLHLTESLA 138
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
+ +I V AG E P+YL L + G ++ + R + + + +IE +V
Sbjct: 139 QETSIIRVAAGKIAERPLYL--LHISSGRGAEGEVNTVHHRHHLEIARNAQAEVIEHYVS 196
Query: 250 KEGND-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
ND ++ + L +G +++H L +S + H
Sbjct: 197 L--NDAAHFTGARLTANVGDNAQLQHCKLAFESRPSYHF 233
>gi|189459831|ref|ZP_03008616.1| hypothetical protein BACCOP_00461 [Bacteroides coprocola DSM 17136]
gi|189433441|gb|EDV02426.1| FeS assembly protein SufD [Bacteroides coprocola DSM 17136]
Length = 447
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 89 WPSRKDEPFRFTDTSMIKSS----QIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN 144
+P+RK E +++T+ S + + + P + +V P++ F+ N A +
Sbjct: 42 FPTRKQEKYKYTEVSKYFAPDYGLNLNRLEFPVNPYEVFK-CDVPNMSTSLYFVVNDAFD 100
Query: 145 L-----SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
+ LP+GV GSL V++ + V + + D + N M A D ++YV
Sbjct: 101 KHVHPSAQLPEGVIFGSLKDVAEQHPELVKKYYGKLADTSKDGVVAFNTMFAQDGALMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG-IIEEFVGKEGNDCY 256
P +E P+ L +++ +V++ + N R+++++EEG + +I + E N +
Sbjct: 161 PKNVVMERPVQL--VNILRADVNT----MVNRRILIILEEGAQAKLLICDHAMDEVN--F 212
Query: 257 WANSVLEVVIGKGG 270
+ V+E IG+
Sbjct: 213 LSTQVVEAFIGENA 226
>gi|198277422|ref|ZP_03209953.1| hypothetical protein BACPLE_03636 [Bacteroides plebeius DSM 17135]
gi|198269920|gb|EDY94190.1| FeS assembly protein SufD [Bacteroides plebeius DSM 17135]
Length = 449
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSL-----DVSTDAQFPSLVLIDG 136
+P+RK E +++T+ S + ++++ P ++ST F D
Sbjct: 44 FPTRKQEKYKYTEVSKYFAPDYGLNLNRLEFPVNPYEVFKCDVPNMSTSLYFVVNDTFDK 103
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGV 194
+ SA LP+GVY GSL V++ V + + D + N M A D
Sbjct: 104 HVHPSA----QLPEGVYFGSLKDVAEQRPDLVRKYYGKLADTSKDALAAFNTMFAQDGVC 159
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
+YVP +E PI L +++ +VD + N RV++++E+G + ++
Sbjct: 160 MYVPKNVVLERPIQL--VNILRADVDF----MVNRRVLIILEDGAQAKLL 203
>gi|115524971|ref|YP_781882.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisA53]
gi|115518918|gb|ABJ06902.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris BisA53]
Length = 439
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 95/230 (41%), Gaps = 17/230 (7%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI--------QPITRPSS 118
LP + + R+ + ++ P+R+ E +++TD ++ + + R +
Sbjct: 24 LPGAAAVAEKRELAFESYARQGLPNRRVEDWKYTDLRVLMREVLPLAAGPDHATLARAAD 83
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG 178
+L + +VL+DG +L++L DG+ + +L D + + D +
Sbjct: 84 ALKLHAIEGVRRIVLVDGVFVADLSDLADLEDGLVIRALREALDQ-GEPLEDRWPAPETA 142
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEE 237
D ++N D VI V A + P+ + +++ + P++ R ++ +
Sbjct: 143 DAMVALNTAMMTDGVVIEVGADIVLARPLQIVHVA-------AAATPVAIVTRSLLRLGR 195
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++E FV G Y + L++ I G ++ L + +A HI
Sbjct: 196 NARATLVESFVAAGGTKGYQTHDALQIAIEDGARLEQIRLNEDATDAFHI 245
>gi|238897308|ref|YP_002922985.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465063|gb|ACQ66837.1| required for stability of Fe-S component of FhuF [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 432
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMI--------KSSQIQPITRPSSSLDVSTDAQF 128
+++ Q LL +P K E +R+T + + K S + P L + Q
Sbjct: 38 KEAHWQALLKLGFPHAKHEDWRYTSLNRLLDHTFTLEKKSTVTP--EKCGDLALFMVGQS 95
Query: 129 PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMG 188
LV IDG S + +P LL + V + F +
Sbjct: 96 HKLVFIDGHFIASLSEIDEIP-----YELLKRKQAVPAPVKP--------EFFLHLTESL 142
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
+ + VI + AG K + P+YL ++S ++ L +++ R +L+E G E ++E FV
Sbjct: 143 SVENLVIRLAAGQKSKKPLYLLHIS---SGQETSPLKMAHYRHHLLLEPGSEAEVVEHFV 199
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRH---SYLQNQSLNAAH 286
++ + L IG+ ++ H ++ NQS + AH
Sbjct: 200 SL-NTQRHFTGARLTASIGEEARLHHYKLAFENNQSDHFAH 239
>gi|108760528|ref|YP_629415.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
gi|108464408|gb|ABF89593.1| FeS assembly protein SufD [Myxococcus xanthus DK 1622]
Length = 446
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 92/238 (38%), Gaps = 28/238 (11%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF---- 128
L++LR + P+ +DE ++++ I P T DVS D
Sbjct: 28 LKRLRADALAHFERQGLPTTRDEAWKYSRLGAIAEGTFIPRT------DVSRDTAHLSAV 81
Query: 129 --------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV--SDGIMKRVSDFISEFQCG 178
P LV +DG + +++ LP G+ + L DG +
Sbjct: 82 VERLGLPGPRLVFVDGRLAPELSSVAGLPRGLTLKPLRDAVREDGELLESVLGQRALANE 141
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++N + ++ + G E P+ + +L+ V +S+PR++V+ E
Sbjct: 142 HAFTALNAALLEEGVLLRLAPGALSEVPVQVVFLTRGDAPV------LSSPRILVVAGES 195
Query: 239 GEVGIIEEFVGKEGNDCY--WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
E ++E + + N+V EV +G + H LQ ++ A H+ RQ
Sbjct: 196 SEATLVETYASAGPAGSAATFTNAVTEVTLGDNASLHHYKLQVEADAALHVGALHARQ 253
>gi|406962621|gb|EKD88921.1| hypothetical protein ACD_34C00274G0002, partial [uncultured
bacterium]
Length = 334
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLK 210
L + DG +K+ D E+ + F ++N +YVP G KVE P+
Sbjct: 148 FLSIEDG-LKQYPDLFREYFGTVIPIEDNKFAALNSAVWSGGSFVYVPKGVKVELPL-QA 205
Query: 211 YLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGG 270
Y + N+ + R +++ +EG +V +E + + V+E+++ KG
Sbjct: 206 YFRLNMANIGQFE------RSLIIADEGAQVHYVEGCTAPSYTTDSFHSGVIEIIVKKGA 259
Query: 271 KVRHSYLQNQSLN 283
+VR++ +QN S N
Sbjct: 260 RVRYTTIQNWSTN 272
>gi|350553961|ref|ZP_08923110.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
gi|349789269|gb|EGZ43233.1| FeS assembly protein SufD [Thiorhodospira sibirica ATCC 700588]
Length = 437
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 89 WPSRKDEPFRFTDTSMIKSSQIQPITRP----SSSLDVSTDAQFPS--LVLIDGFIQNSA 142
+P + E +++T +K+ + ++ L+ T PS LV +DG Q +
Sbjct: 41 YPDPRHEEWKYTKLRTLKNQSFVTASHAPMLDAADLERCTWPDLPSHRLVFVDGIYQPAL 100
Query: 143 LNLSNLPDGVYVGSL--------LGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV 194
+LP GV + SL +G+ + V S F +L +G +
Sbjct: 101 SEPGDLPAGVQITSLAQAIAAGAVGLETVLGTLVDAQYSSFAAWNLAQLFDG------AL 154
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLP-ISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
I + ++ P++L ++ ++ P I +P V+ +G + I+E +G G
Sbjct: 155 IQLAPDTCLQQPVHLLFIH------SAQPTPQIYHPHSVIQAGQGSKAHILEHHIGLPGA 208
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ NS E+ + + H+ LQ S + HI
Sbjct: 209 QGF-CNSATEIHLSANATLEHTLLQEHSEASYHI 241
>gi|241204824|ref|YP_002975920.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858714|gb|ACS56381.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 424
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 21/225 (9%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLD-V 122
LP + LRD L P+R+ E + +TD +++++ Q S +L+ +
Sbjct: 25 GELPGNGTVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAGDAGSEALEPL 84
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFW 182
DA L +I G N L Y LL DG +D + D
Sbjct: 85 VADATV--LAVIQGH-SNQKATADGLGVSAYSEHLL---DG---SAADGLDALGSDDAVG 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
ING D VI VPA ++ENP+ +++ + G +LP+S G +
Sbjct: 136 RINGSFVRDGYVIDVPAETELENPLEIQF--IHAGGQTHTRLPVS-------FGAGVKAT 186
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 187 VIERHRTVTG-DAALVSHVTDITVGEGTELTWIILQQQGADDTHL 230
>gi|357060944|ref|ZP_09121706.1| FeS assembly protein SufD [Alloprevotella rava F0323]
gi|355375479|gb|EHG22765.1| FeS assembly protein SufD [Alloprevotella rava F0323]
Length = 434
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
Q D +N M A D +I++PAG K+E P L+ +++ +D +SN RV+++V
Sbjct: 123 QQRDAVSELNTMLAQDGILIHIPAGKKLERP--LQIVNISAATIDF----MSNRRVLIVV 176
Query: 236 EEGGEVGIIEEFVGKEGNDCY-WANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
EEG E I+ F + + V+E+ GK K+ L+ + H+ + Q
Sbjct: 177 EEGAEGTIL--FCDESPTEQRSLTTQVVEIFAGKNSKLHLYALEETADTHTHLSNMYIEQ 234
>gi|417859734|ref|ZP_12504790.1| transport system [Agrobacterium tumefaciens F2]
gi|338822798|gb|EGP56766.1| transport system [Agrobacterium tumefaciens F2]
Length = 425
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 26/237 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L D+ + S LP + RD L + P+R+ E + +TD S++++ P
Sbjct: 17 ALVDAYTAKFSELPGDGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRTV---PE 73
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSD 170
RP+ ++ SLV ++Q+ ++ + + + SLL DG +
Sbjct: 74 DRPAPVIEKQAPTVAGSLV---AYVQHGTADIGKIDEIRVSRFADSLL---DG---SAAA 124
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
++E D+ ING D V+ +PA ++E PI L+ + G V S R
Sbjct: 125 GLAEASKDDVIGRINGSFVRDGLVLDIPADAEIEKPIELQVIH-GAGQVHS--------R 175
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V +G + +IE + +D +SV ++V+ G +V LQ Q H+
Sbjct: 176 FPVRFGKGSKATVIERHLSVT-SDAALVSSVTDIVVEDGAEVTWIILQQQGAADVHL 231
>gi|320104747|ref|YP_004180338.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
gi|319752029|gb|ADV63789.1| Iron-regulated ABC transporter membrane component SufB [Isosphaera
pallida ATCC 43644]
Length = 473
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+Y+PAG KV+ P+ Y + N+ + R +++VEEG +V +E
Sbjct: 194 VYIPAGVKVDIPL-QAYFRINAENMGQFE------RTLIIVEEGAQVHYVEGCTAPIYTS 246
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN + N
Sbjct: 247 ESLHSAVVEIIVKKGGRCRYTTIQNWANN 275
>gi|255692958|ref|ZP_05416633.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
gi|260621269|gb|EEX44140.1| FeS assembly protein SufD [Bacteroides finegoldii DSM 17565]
Length = 449
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 44 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 102
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V++ + V + + D + N A D + YV
Sbjct: 103 NKALPKTHLPEGVIFGSLKEVAEQYPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYV 162
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV++++E+G + ++ + N +
Sbjct: 163 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLLLCDHAMD-NVNFL 215
Query: 258 ANSVLEVVIGKG 269
A V+EV G+
Sbjct: 216 ATQVIEVFAGEN 227
>gi|402770812|ref|YP_006590349.1| FeS assembly protein SufD [Methylocystis sp. SC2]
gi|401772832|emb|CCJ05698.1| FeS assembly protein SufD [Methylocystis sp. SC2]
Length = 430
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 27/214 (12%)
Query: 74 QKLRDSSSQTLLSTPW--------PSRKDEPFRFTD--TSMIKSSQIQPITRPSSSLDVS 123
+++RD + L + W P+R+ E + +TD T+M + + + +R + SL +
Sbjct: 17 EEMRDKGAPRLRAAGWAAFSESGVPNRRMEAWHYTDLKTAMGRPAPLATASRAAVSLPRA 76
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL--- 180
D+ LV +DG + +++ LPDGV V SL D + + +S D+
Sbjct: 77 HDSL--RLVTLDGVFRPDLSDIARLPDGVVVQSL---RDALAQGEPHVMSALASADIGAQ 131
Query: 181 --FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
++N D VI + G ++ I L L+ ++ + R +V++ G
Sbjct: 132 DPILALNAALMQDGVVIQIAPGAAIDRAIELATLA------SAEAAQSTYTRALVMLGAG 185
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+IE VG + NS L + + G ++
Sbjct: 186 ARATMIET-VGALSSAPAQDNSALVLRLAPGARL 218
>gi|430746001|ref|YP_007205130.1| FeS assembly protein SufB [Singulisphaera acidiphila DSM 18658]
gi|430017721|gb|AGA29435.1| FeS assembly protein SufB [Singulisphaera acidiphila DSM 18658]
Length = 471
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+Y+PAG KV+ P+ Y + N+ + R +++VEEG +V +E
Sbjct: 192 VYIPAGVKVDIPL-QAYFRINAENMGQFE------RTLIVVEEGAQVHYVEGCTAPMYTT 244
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN + N
Sbjct: 245 ESLHSAVVEIIVKKGGRCRYTTIQNWASN 273
>gi|423301194|ref|ZP_17279218.1| FeS assembly protein SufD [Bacteroides finegoldii CL09T03C10]
gi|408471795|gb|EKJ90324.1| FeS assembly protein SufD [Bacteroides finegoldii CL09T03C10]
Length = 449
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 44 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 102
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL ++LP+GV GSL V++ + V + + D + N A D + YV
Sbjct: 103 NKALPKTHLPEGVIFGSLKEVAEQYPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYV 162
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
P VE PI L +++ +V+ + N RV++++E+G + ++ + N +
Sbjct: 163 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLLLCDHAMD-NVNFL 215
Query: 258 ANSVLEVVIGKG 269
A V+EV G+
Sbjct: 216 ATQVIEVFAGEN 227
>gi|229496659|ref|ZP_04390373.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
gi|229316556|gb|EEN82475.1| SufB/sufD domain protein [Porphyromonas endodontalis ATCC 35406]
Length = 454
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 119 SLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDF---ISEF 175
S DV ++L + F +N + L LP GVY+GSL +R F +
Sbjct: 82 SCDVEDMPYMQGIILNERFDRNLSQGLEQLPTGVYIGSLRAFLTEHPEREPQFAKIYGRY 141
Query: 176 QCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D+ ++N M A D +++VP G KV P+ L ++ D L +V+
Sbjct: 142 AETDIDGIVALNTMFAQDAVLLFVPKGVKVTEPLRL----IQLVRADVPMLLFRRVLIVL 197
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
E EV + + K + + V+EV + + +++ ++ S H+ +R
Sbjct: 198 EEESAIEVLVCNHTLDKHD---FLVDQVIEVHVAENAQLKLYDVEESSSRMRHLSTLCLR 254
Query: 294 Q 294
Q
Sbjct: 255 Q 255
>gi|320528271|ref|ZP_08029433.1| FeS assembly protein SufB [Solobacterium moorei F0204]
gi|320131185|gb|EFW23753.1| FeS assembly protein SufB [Solobacterium moorei F0204]
Length = 475
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G K+E P+ Y + S G + R +++V++G E +E +
Sbjct: 196 IYVPKGVKLEKPLQSYFRINSESMGQFE---------RTIIIVDDGAECSYVEGCTAPQY 246
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+EV +GK K R+S +QN S N
Sbjct: 247 SKDSLHAAVVEVYVGKNAKCRYSSVQNWSGN 277
>gi|380693250|ref|ZP_09858109.1| ABC transporter permease [Bacteroides faecis MAJ27]
Length = 447
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + ++++ P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDISKYFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL +LP+GV GSL V+ + V + + D + N A D V YV
Sbjct: 101 NKALPKGHLPEGVIFGSLKEVAAEHPELVKKYYGKLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-- 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDSVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|92117849|ref|YP_577578.1| FeS assembly protein SufD [Nitrobacter hamburgensis X14]
gi|91800743|gb|ABE63118.1| Iron-regulated ABC transporter permease protein SufD [Nitrobacter
hamburgensis X14]
Length = 441
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 15/238 (6%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT--- 114
++ + S LP + R + + S P R+ E +++TD ++ +
Sbjct: 17 EAFAVACSRLPGAGKVAAARQKAFEAYESLGLPHRRVEDWKYTDLRVLMREVLPLAAAPD 76
Query: 115 -----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVS 169
+ L + VL+DG ++ L DG+ S V + +
Sbjct: 77 QAALAKAGEILKAQSLGDAYRFVLVDGVFVPQLSDVGGLEDGLRARSFHEVLGTGTDQSA 136
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
D + D+ S+N D +I V + PI++ +++ S +
Sbjct: 137 DLFTTSATTDVMVSLNAAMTTDGVIIEVGDRISLTKPIHVVHVTTV-----SSASAFTRS 191
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
R+ + + V +IE FV + Y A+ L V +G G V H L + +A +I
Sbjct: 192 RLTI--GKAARVTLIESFVAADDAKSYQAHDALIVAVGDGADVAHIRLMADADDATNI 247
>gi|406949997|gb|EKD80354.1| hypothetical protein ACD_40C00128G0012 [uncultured bacterium]
Length = 459
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 162 DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPIYLKYLSVE 215
DG +K+ + + E+ + + N + A + V +Y+P G KV+ P+ Y +
Sbjct: 141 DGGLKQYPEIVKEYFGKIVPYGDNKLAALNTAVWSGGSFVYIPKGVKVDLPL-QAYFRIN 199
Query: 216 GGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHS 275
G N + R +++ EEG V +E + ++V+EV++ +G KVR++
Sbjct: 200 GENAGQFE------RTLIIAEEGSSVSYVEGCSAPAFSSASLHSAVVEVIVKEGAKVRYT 253
Query: 276 YLQN 279
+QN
Sbjct: 254 TVQN 257
>gi|374290115|ref|YP_005037168.1| FeS assembly protein SufD [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358376907|gb|AEU09095.1| FeS assembly protein SufD [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 432
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 56 LEDSLPSSSSSL---PQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQP 112
L+D + SS S L + L KLR S +PS K+E +R T+ + I + +
Sbjct: 3 LKDKIISSFSELNSSEEDSYLSKLRYQSINLFKKNGFPSSKNEEWRETNINSILNQDYKI 62
Query: 113 ITRPSSSLDVSTDAQFPSL--------VLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDG 163
++ +L+ + L V IDG LS+ + +L +S
Sbjct: 63 FSKRKKNLEYQKIEKMVFLKEKNSFILVFIDG---EYNFYLSHKYNNEKKNIILSNISSQ 119
Query: 164 IMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+++ F + + D F S+N + + D G IY+P ++ PI + L + G ++SK
Sbjct: 120 KEEKIKKFYGKLLRKYDAFNSLNTIFSNDGGYIYIPNNVYLKTPIEI--LHIYTG-LESK 176
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
L NPR +++V + +V IIE + + ++NSV E+ ++ + +Q+
Sbjct: 177 ILL--NPRNLIIVGKSSKVKIIEHHKSLKKH-LLFSNSVSEIYALDNSEIEYYKIQD 230
>gi|296087516|emb|CBI34105.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 52/93 (55%), Gaps = 26/93 (27%)
Query: 1 MSALSFSPHLHININRNPKL----------TPKRRAKPNKIRVSLQTTFPQATFSDPFVI 50
M+A SPHL +N PKL TPK R+ P KIR ATFSDPFV
Sbjct: 35 MAATLLSPHLLLN----PKLSIQTSASKFPTPKSRSTP-KIR---------ATFSDPFVP 80
Query: 51 QLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQT 83
Q+AESL SSSS P PLQKLRD+SSQT
Sbjct: 81 QIAESL--EDSLSSSSTSSPPPLQKLRDASSQT 111
>gi|402850222|ref|ZP_10898431.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
gi|402499521|gb|EJW11224.1| Iron-sulfur cluster assembly protein SufD [Rhodovulum sp. PH10]
Length = 448
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 90 PSRKDEPFRFTDTS--MIKSSQIQP------ITRPSSSLDVSTDAQFPSLVLIDGFIQNS 141
P+R+ E +++TD M ++ + P + R + V LVLIDG +
Sbjct: 49 PNRRVEEWKYTDLRNLMREAKPLAPPVGPAGLVRAQGAGRVFAAVGVRRLVLIDGQFISE 108
Query: 142 ALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIY 196
+L++L G+ +GSL ++ + +D ++ D+ +++N D VI
Sbjct: 109 LSDLADLEPGLSIGSL---AEALAANDTDVVARLGAKSPADKDVAFALNTAFMGDGLVIA 165
Query: 197 VPAGCKVENPIYLK--YLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
V G ++ PI+L Y E V ++ L + + E E G +G D
Sbjct: 166 VAPGMQIARPIHLVHCYTGEEAAAVFTRSLVTLGGGAGLTLLESHE--------GPDGID 217
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAV 292
Y ++ L++V+G G ++ + + A H+ T V
Sbjct: 218 -YQVDNALDIVVGDGARLERVKVGAEGDAALHVSTTVV 254
>gi|326794501|ref|YP_004312321.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
gi|326545265|gb|ADZ90485.1| FeS assembly protein SufD [Marinomonas mediterranea MMB-1]
Length = 425
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
+ L + L +R + L +T WP+RK E +R+T ++ + R +S+ +
Sbjct: 16 TELAEQQWLAPIRAKAISQLKNTRWPNRKTEAWRYT--------PLRAVERTLASVK-NA 66
Query: 125 DAQFPSLV--LIDG-------FIQ---NSALNLSNLPDG--VYVGSLLGVSDGIMKRVSD 170
DA LV +I+G F+ + AL+ LP G + +GS L D ++ +S+
Sbjct: 67 DAAEKGLVPAVIEGLSAIEVVFVNGEFSEALSTQVLPAGLSIVLGSQLDNRDDLLDALSE 126
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
E LF +N ++ I V G ++ PI + LS + S+ +
Sbjct: 127 IKPERH---LFGMLNDALVQEVVWIKVAQGVSIDAPIRITNLSSQAAE--------SHVK 175
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL-----QNQSLNAA 285
V VEEG +V ++ E G G + E + K ++ H N S+
Sbjct: 176 AFVSVEEGAQVTVL-EMAGSNGQTL--STGFTEYDLAKDSRLEHYRFALQTDDNVSVGGC 232
Query: 286 HIKWTAVRQL 295
H + QL
Sbjct: 233 HFRLGEAAQL 242
>gi|295099526|emb|CBK88615.1| Iron-regulated ABC transporter membrane component SufB [Eubacterium
cylindroides T2-87]
Length = 467
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 155 GSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYVPAGCKVENPI- 207
G + +D +K D E+ + ++ N A + V IYVP G K+E P+
Sbjct: 142 GVIFLDTDTALKTCPDIFKEYFGKIVPYTDNKYAALNTAVWSGGSFIYVPKGVKLEKPLQ 201
Query: 208 -YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
Y + S++ G + R +++V+EG +V +E + +V+E+ +
Sbjct: 202 SYFRINSMQMGQFE---------RTLIIVDEGADVHYVEGCTAPIYSKDSLHAAVVEIYV 252
Query: 267 GKGGKVRHSYLQNQSLN 283
K K R+S +QN S N
Sbjct: 253 HKNAKCRYSTVQNWSSN 269
>gi|298372247|ref|ZP_06982237.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
gi|298275151|gb|EFI16702.1| ABC transporter [Bacteroidetes oral taxon 274 str. F0058]
Length = 446
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+QL + + +S+++ L K RD+S +P +K E + ++S+I++
Sbjct: 5 VQLYRQFAERIKENSATV-----LNKFRDASFAEFEQKGFPDKKTEAY--LNSSLIETLN 57
Query: 110 IQPITRPSSSLDVST------DAQFPSLVLIDGFIQNSALNLSN-----LPDGVYVGSLL 158
+ LD+ T + PS+ GF+ N +++ LP+GV
Sbjct: 58 TDYDVKIHQ-LDIDTSQNQLFQCKIPSINAALGFMLNDKFYMADDQRRSLPEGV---EFC 113
Query: 159 GVSDG------IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYL 212
+SD ++ R +S+ + D + N + IYV + P+ L +
Sbjct: 114 ALSDAERLYPEVVGRYLHTLSD-KSRDAMTAFNSTFVQNGYFIYVKKNTVADKPLQLINM 172
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ S+ I+ +++VE+G + ++ +EG D ++A+ V EVV+G G +
Sbjct: 173 LL------SEAPMIAFTHNLIVVEQGASLQLLVCDHAEEGVD-FFASKVTEVVVGDGARF 225
Query: 273 RHSYLQNQSLNAAHIKWTAVRQ 294
+ L+N + A ++ V Q
Sbjct: 226 EYYSLENTTRKANNLMQMFVTQ 247
>gi|313204300|ref|YP_004042957.1| fes assembly protein sufd [Paludibacter propionicigenes WB4]
gi|312443616|gb|ADQ79972.1| FeS assembly protein SufD [Paludibacter propionicigenes WB4]
Length = 466
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 32/261 (12%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDT----SMI 105
I L + +S+ S+++ + RD+S +P+ E ++++D S+
Sbjct: 26 IDLYKQHHESIKKHSAAV-----MNDSRDASFALFEELRFPTTALEDYKYSDLKAALSID 80
Query: 106 KSSQIQPITRP-----SSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGV 160
I I P + DV + V+ D F LP+GV +GSL +
Sbjct: 81 YGLNINRIPIPVNPYDAFKCDVPGIQSYLFFVVNDAFYPTMDPKALKLPEGVIIGSLKEI 140
Query: 161 SDGIMKRVSDFISEFQC--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGN 218
++ + + ++ + D + NG A D +YVP ++ P+ L +++ +
Sbjct: 141 AETRPELLKEYYGKLSTPKKDGLVAFNGAFAQDGFFMYVPKNVQLTKPVQL--VNIMRSD 198
Query: 219 VDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--CYWANSVLEVVIGKGGKVRHSY 276
VD ++N ++++EEG + ++ V D + +N V EV +G+ H
Sbjct: 199 VDF----MANSHNLIILEEGAKAQLL---VCDHTVDEVRFLSNRVTEVFVGEHATYEHYK 251
Query: 277 LQNQSLNAAHIKWTAVRQLVV 297
L+N H K T + L++
Sbjct: 252 LEN-----THTKTTNLSTLLI 267
>gi|374855193|dbj|BAL58056.1| Fe-S cluster assembly protein SufB [uncultured Chloroflexi
bacterium]
Length = 468
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP KVE P+ Y + N+ + R +++V+EG EV +E + +
Sbjct: 189 VYVPPNVKVELPL-QAYFRLNAANIGQFE------RTLIIVDEGAEVHYVEGCTAPQYST 241
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ + V+E+V+ +G + R++ +QN S N ++
Sbjct: 242 DSFHSGVIEIVVKRGARSRYTTIQNWSHNVYNL 274
>gi|60679818|ref|YP_209962.1| ABC transporter [Bacteroides fragilis NCTC 9343]
gi|375356660|ref|YP_005109432.1| putative ABC transporter protein sufD [Bacteroides fragilis 638R]
gi|383116570|ref|ZP_09937318.1| FeS assembly protein SufD [Bacteroides sp. 3_2_5]
gi|423259388|ref|ZP_17240311.1| FeS assembly protein SufD [Bacteroides fragilis CL07T00C01]
gi|423263640|ref|ZP_17242643.1| FeS assembly protein SufD [Bacteroides fragilis CL07T12C05]
gi|423282469|ref|ZP_17261354.1| FeS assembly protein SufD [Bacteroides fragilis HMW 615]
gi|60491252|emb|CAH06000.1| putative ABC transporter protein [Bacteroides fragilis NCTC 9343]
gi|301161341|emb|CBW20881.1| putative ABC transporter protein sufD [Bacteroides fragilis 638R]
gi|382973777|gb|EES88438.2| FeS assembly protein SufD [Bacteroides sp. 3_2_5]
gi|387776968|gb|EIK39068.1| FeS assembly protein SufD [Bacteroides fragilis CL07T00C01]
gi|392707062|gb|EIZ00182.1| FeS assembly protein SufD [Bacteroides fragilis CL07T12C05]
gi|404582037|gb|EKA86732.1| FeS assembly protein SufD [Bacteroides fragilis HMW 615]
Length = 451
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 46 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 104
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL S LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 105 NQALPKSGLPEGVIFGSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 164
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P V+ PI L +++ +V+ + N RV++++EEG + ++
Sbjct: 165 PKNVIVDRPIQL--VNILRADVNF----MVNRRVLIILEEGAQARLL 205
>gi|265764951|ref|ZP_06093226.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
gi|263254335|gb|EEZ25769.1| FeS assembly protein SufD [Bacteroides sp. 2_1_16]
Length = 447
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N AL S LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NQALPKSGLPEGVIFGSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P V+ PI L +++ +V+ + N RV++++EEG + ++
Sbjct: 161 PKNVIVDRPIQL--VNILRADVNF----MVNRRVLIILEEGAQARLL 201
>gi|392391462|ref|YP_006428065.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
gi|390522540|gb|AFL98271.1| Iron-regulated ABC transporter permease protein SufD
[Ornithobacterium rhinotracheale DSM 15997]
Length = 423
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 26/246 (10%)
Query: 58 DSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPS 117
+ + S S P P Q + + + +P+ K+E +RFT+ + S + +
Sbjct: 6 EEIKSHFESYPTPSERQT---QAFEEFVQEGFPTTKNEEWRFTNLKPVISQEYN-LKLNE 61
Query: 118 SSLDVSTDAQ--FPSL-----VLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIM--KRV 168
+L++S Q P L V ++GF A NLSN+ + + + ++ K +
Sbjct: 62 EALNLSDIEQHFIPELDSYKIVFVNGFF---AENLSNIGSEIEFLPVTAAKENVIYQKYL 118
Query: 169 SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN 228
+ + + S+N A + I++ KVE PI + + + E +
Sbjct: 119 NTVVKH---ENSLESLNTALATNGYYIHIKHNQKVEKPIEIVFFTNEA------QASFVQ 169
Query: 229 PRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
P+ +++ + + +IE V N+ ++ N+V E+V+G+ ++ QN + + A I
Sbjct: 170 PKNLIVAGDHATLDVIESHVSL-NNEPHFTNAVTEIVVGENTQINFYKTQNDTEHTALID 228
Query: 289 WTAVRQ 294
Q
Sbjct: 229 QVFAEQ 234
>gi|283769602|ref|ZP_06342498.1| FeS assembly protein SufB [Bulleidia extructa W1219]
gi|283103870|gb|EFC05256.1| FeS assembly protein SufB [Bulleidia extructa W1219]
Length = 468
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G K+E P+ Y + S G + R +++V++G E+ +E +
Sbjct: 189 IYVPPGVKLEKPLQSYFRINSESMGQFE---------RSIIIVDDGAEISYVEGCTAPQY 239
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+EV +GK K R+S +QN S N
Sbjct: 240 SKDSLHAAVVEVFVGKQAKCRYSSVQNWSGN 270
>gi|424870814|ref|ZP_18294476.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393166515|gb|EJC66562.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 424
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD 125
LP + LRD L P+R+ E + +TD +++++ Q S SL+ D
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAGDAGSQSLEPLVD 86
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
L +I G N + L Y LL DG + + D IN
Sbjct: 87 -DATVLAVIQGH-SNQKATVDGLGVSAYSERLL---DG---SAAGGLDALGSDDAVGRIN 138
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
G D V+ VPA ++ENP+ ++++ GG + + +LP+S G + +IE
Sbjct: 139 GSFVRDGYVLDVPADTELENPLEIQFIHA-GGQIHT-RLPVS-------FGAGVKATVIE 189
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 190 RHLTVTG-DAALVSHVSDITVGEGTELTWIILQQQGADDTHL 230
>gi|237720412|ref|ZP_04550893.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450163|gb|EEO55954.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 447
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V ++ + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKEYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|262405456|ref|ZP_06082006.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|293370445|ref|ZP_06616998.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|294646235|ref|ZP_06723889.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294809097|ref|ZP_06767815.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|298480552|ref|ZP_06998749.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|336404465|ref|ZP_08585160.1| FeS assembly protein SufD [Bacteroides sp. 1_1_30]
gi|345510641|ref|ZP_08790205.1| FeS assembly protein SufD [Bacteroides sp. D1]
gi|423214859|ref|ZP_17201387.1| FeS assembly protein SufD [Bacteroides xylanisolvens CL03T12C04]
gi|229442663|gb|EEO48454.1| FeS assembly protein SufD [Bacteroides sp. D1]
gi|262356331|gb|EEZ05421.1| FeS assembly protein SufD [Bacteroides sp. 2_1_22]
gi|292634437|gb|EFF52973.1| FeS assembly protein SufD [Bacteroides ovatus SD CMC 3f]
gi|292638453|gb|EFF56817.1| FeS assembly protein SufD [Bacteroides ovatus SD CC 2a]
gi|294443651|gb|EFG12400.1| FeS assembly protein SufD [Bacteroides xylanisolvens SD CC 1b]
gi|295086249|emb|CBK67772.1| FeS assembly protein SufD, group 1 [Bacteroides xylanisolvens XB1A]
gi|298273373|gb|EFI14937.1| FeS assembly protein SufD [Bacteroides sp. D22]
gi|335942262|gb|EGN04109.1| FeS assembly protein SufD [Bacteroides sp. 1_1_30]
gi|392692122|gb|EIY85360.1| FeS assembly protein SufD [Bacteroides xylanisolvens CL03T12C04]
Length = 447
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDYGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V+ + V + + D + N A D V YV
Sbjct: 101 NRALPKVNLPEGVIFGSLKEVAGQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGK 268
+ A V+EV G+
Sbjct: 212 FLATQVIEVFAGE 224
>gi|154253698|ref|YP_001414522.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
gi|154157648|gb|ABS64865.1| FeS assembly protein SufD [Parvibaculum lavamentivorans DS-1]
Length = 437
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI---------KSSQIQPITRPSSSLDVS 123
L + R+++ + + P R+ E +++TD + + + I +
Sbjct: 27 LSRRRETALKAFMEAGLPHRRLEEWKYTDLRQVLDKAAFASAPAHEGAVILPEGGAAAAF 86
Query: 124 TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG------VSDGIMKRVSDFISEFQC 177
++V ++G + N + LP GV + L D + +R+ D
Sbjct: 87 AAIDRYTVVFVNGSYRADLSNTARLPKGVELRPLADAVPEQWAKDLVERRLDDARQAEGV 146
Query: 178 GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEE 237
DL N D + + +G K++ P++L +++ + G S+ R ++L+E+
Sbjct: 147 VDL----NTALMSDGTCLRIRSGVKLDKPLHLLFVTADAG--------ASHARNLILLEK 194
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
E I E +G +++ V ++ + + ++ H LQ+++ A H+
Sbjct: 195 EAEATIFETHIGSAAG---FSDIVTDIALAECARLDHLKLQDEAPGAVHL 241
>gi|269118905|ref|YP_003307082.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
gi|268612783|gb|ACZ07151.1| FeS assembly protein SufB [Sebaldella termitidis ATCC 33386]
Length = 470
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F +++G +YVP G KV+ P+ Y + + E G + +++VEEG
Sbjct: 177 FAALHGAVWSGGSFVYVPKGVKVDKPLQSYFRLNAAEAGQFE---------HTLIIVEEG 227
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++ IE + +E+ I KGG++R+S ++N S N
Sbjct: 228 ADLHFIEGCSAPKYQKNALHAGAVELFIKKGGRLRYSTIENWSRN 272
>gi|269837552|ref|YP_003319780.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
gi|269786815|gb|ACZ38958.1| FeS assembly protein SufB [Sphaerobacter thermophilus DSM 20745]
Length = 467
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G KVE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 188 VYVPKGVKVEVPL-QAYFRINSENMGQFE------RTLIIVDEGAYVHYVEGCTAPTYST 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ +GG+ R++ +QN S N ++
Sbjct: 241 ASLHSAVVEIIVKEGGRCRYTTIQNWSKNVYNL 273
>gi|338740505|ref|YP_004677467.1| ABC transporter permease [Hyphomicrobium sp. MC1]
gi|337761068|emb|CCB66901.1| ABC transporter, permease; Fe-S cluster assembly protein
[Hyphomicrobium sp. MC1]
Length = 447
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 100/251 (39%), Gaps = 17/251 (6%)
Query: 47 PFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI- 105
P ++L ++ SSL + R+ + + + P R E +++TD +
Sbjct: 10 PMKTAAEQTLAKLFVATQSSLAGGPEISACREQAFRNFEAKGLPHRHIESWKYTDLRAVM 69
Query: 106 ---KSSQIQPIT----RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL 158
K P T R + + LV ++G ++ + G+ + SL
Sbjct: 70 REAKGLAQAPNTDIRRRAADACKALASVGSRRLVFVNGAFAAELSDVEAIEPGLKISSLA 129
Query: 159 -GVSDGIMKRVSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
+S+G V+ GD +S+N D VI V G + P++L +
Sbjct: 130 EALSNGNPSVVASIEGASPASGDAVFSLNTAFMQDGAVIDVAPGAVIARPLHLVFF---- 185
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSY 276
S++ + R ++ V +G + +IE G +G D Y N+ L++ IG G + H
Sbjct: 186 --YGSEEASATVTRSLLKVGDGARITLIESHEGPDGVD-YQCNNALDISIGAGACLDHVK 242
Query: 277 LQNQSLNAAHI 287
+ + + H+
Sbjct: 243 IISDGARSLHV 253
>gi|399030740|ref|ZP_10731071.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
gi|398071139|gb|EJL62409.1| FeS assembly protein SufD [Flavobacterium sp. CF136]
Length = 438
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
+ L E L S + + L +R ++ + + +P++K+E +++T ++I +
Sbjct: 1 MDLKEKLVSSFMAFEERVDVHSDLHDIRTNAIKNFENKGFPTKKEEAWKYTSLNVILKND 60
Query: 110 IQPITRPSSSLDVSTDAQF-------PSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVS 161
+ ++++ + ++ LV IDG + +S L+ S DG+ V + ++
Sbjct: 61 FTVFPKQENAIEFNQVKKYFLHEIDTYKLVFIDG-VFSSHLS-STTHDGIDVCLMSSALT 118
Query: 162 DGIMKRVSD-FISEFQCGDL-FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
K V D + ++ D S+N A + I +P + PI + Y S GN
Sbjct: 119 KPKYKMVIDKYFNQIASKDESLTSLNTAFASEGAFINIPQKKVADKPIEIMYFST--GN- 175
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + PR +++V E V IIE N NSV E+ K V + +QN
Sbjct: 176 --EAALMVQPRNLIIVGENSHVQIIERHQSLNENPV-LTNSVTEIFAQKRAIVDYYKIQN 232
Query: 280 QSLNAAHIKWTAVRQ 294
++ A I T V Q
Sbjct: 233 DNIEANLIDNTYVSQ 247
>gi|126665740|ref|ZP_01736721.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
gi|126629674|gb|EBA00291.1| FeS assembly protein SufD [Marinobacter sp. ELB17]
Length = 433
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 29/248 (11%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+R+ E ++++ + + ++ ++S
Sbjct: 12 LQSAGQALPEPLL--ALRANRASALTDLLLPTRRTENWKYSAKHLKLTDEMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALN------LS-------NLPDGVYVGSLLGVSDGIMK 166
D Q ++VL++G ++ A N LS N D LLG K
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALEGLSIQRFSDLNGDDAELAADLLG------K 123
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+SD ++ +L +N D +I + G ++ P+++ + + +
Sbjct: 124 SISDQPAKHGSINLSL-LNAARFEDGLLIQLQPGTVLDQPLFVVH------HTSASHSGS 176
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+ P ++V ++ ++E++V G N+ E +G G V L + N H
Sbjct: 177 AFPCILVAAGSNSQLTLVEDYV-SSGESPVMVNTATEFSLGDGANVTSVRLNTEGQNVQH 235
Query: 287 IKWTAVRQ 294
+ T VRQ
Sbjct: 236 MGTTGVRQ 243
>gi|430003785|emb|CCF19576.1| putative iron-sulfur cluster assembly protein [Rhizobium sp.]
Length = 425
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 93/240 (38%), Gaps = 40/240 (16%)
Query: 66 SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-----KSSQIQPITRPSSSL 120
SLP + RD L ++ P+R+ E + +TD + S+ + P P +SL
Sbjct: 26 SLPGNGAVAGTRDRLLDDLKTSGLPTRRVESWHYTDLRTLLRAVPASNVVAPTIEPVASL 85
Query: 121 -------DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
V A PS V++DG +S+ D + G+ + + R D
Sbjct: 86 IEGATVLPVLQGAAAPS-VIVDG------AEVSSFADTLVSGA---AAQSLTARDKD--- 132
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D ING D I VPAG VE PI L+ L G + P++
Sbjct: 133 -----DAIGKINGSFVCDGYQINVPAGATVETPIELQAL--HGAGQVHTRFPVT------ 179
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
G I+E G D + +S+ ++ + +G V LQ Q + H+ VR
Sbjct: 180 -FGAGSRATIVERHRSVTG-DAAFISSISDLTLEEGADVVWVILQEQGADDTHLGQIRVR 237
>gi|410620757|ref|ZP_11331615.1| Fe-S cluster assembly protein SufD [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410159640|dbj|GAC26989.1| Fe-S cluster assembly protein SufD [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 440
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 35/226 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLV 132
LQ +RD++S+ L P+RK E +++ + ++ Q + LD + L+
Sbjct: 23 LQGIRDAASERLRVLQLPTRKTEDWKYLKLEKLLAND-QLDAQSMQELDSKSLEDIDELL 81
Query: 133 ---LIDGFIQNSALNLSNLPDGVYVGSLL------------GVSDGIMKRVSDFI--SEF 175
IDG A L +GV+V L S + + D + S
Sbjct: 82 EQSFIDGL---DAYRLV-FVNGVFVSQLSQHDSNPYSVLFSAASKAQQQLIVDHLDTSHN 137
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D F S+N D +I +P C V+ P Y+ L++ ++ S R++V+
Sbjct: 138 YYHDYFSSLNSAQLEDGLLINIPKDCVVDKPFYIVNLTI------GEQPKTSMMRLLVIA 191
Query: 236 EEGGEVGIIEEF---VGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
E G IIE + G N+V+E + + HS LQ
Sbjct: 192 ETGSTATIIEHEDAPLKHTG----MVNTVIECFVNDHAYITHSRLQ 233
>gi|227833040|ref|YP_002834747.1| ABC transporter [Corynebacterium aurimucosum ATCC 700975]
gi|262182472|ref|ZP_06041893.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
gi|227454056|gb|ACP32809.1| ABC-type transport system involved in Fe-S cluster assembly
[Corynebacterium aurimucosum ATCC 700975]
Length = 481
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEEG V IE N
Sbjct: 202 VYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVEEGAYVHYIEGCTAPIYNS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V+E+++ KGG+ R++ +QN S N ++
Sbjct: 255 DSLHTGVIEIIVKKGGRCRYTTIQNWSTNVYNL 287
>gi|406835980|ref|ZP_11095574.1| FeS assembly protein SufB [Schlesneria paludicola DSM 18645]
Length = 472
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 155 GSLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
G + +D ++ D + E+ + F ++N IYVP G K+E P+
Sbjct: 147 GVIFTDTDSAVRDYPDLVREYFGTIIPSADNKFAALNSAVWSGGSFIYVPKGVKIEFPL- 205
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
Y + N+ + R +++V+EG V +E + ++V+E+++ +
Sbjct: 206 QAYFRINTQNMGQFE------RTLIIVDEGASVHYVEGCTAPTYSSDSLHSAVVEIMVKR 259
Query: 269 GGKVRHSYLQNQSLNAAHI 287
GG+ R++ +QN S N ++
Sbjct: 260 GGRCRYTTIQNWSNNVYNL 278
>gi|260591773|ref|ZP_05857231.1| FeS assembly protein SufD [Prevotella veroralis F0319]
gi|260536057|gb|EEX18674.1| FeS assembly protein SufD [Prevotella veroralis F0319]
Length = 467
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST-------- 124
+ ++RD + +PS+K E +++TD +Q + P L+++
Sbjct: 46 MNEVRDKAFDDFRRLGFPSKKVERYKYTD--------MQKLFEPDYGLNLNRLEIPVDPY 97
Query: 125 ---DAQFPSLVLIDGFIQNSALNLSNLP-----DGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P+L FI N LP DGV + SL V+ + VS + +
Sbjct: 98 ETFKCDVPNLSTSLYFIVNDQFYTKALPKAKLNDGVVIDSLNHVAIEHPELVSKYYGKLA 157
Query: 177 C--GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ++N M A D IYVP +++ + + +++ +VD + N RV+++
Sbjct: 158 DTEKDAVTALNTMLAQDGLFIYVPKNVQLDRTV--QVINILRSDVD----LMVNRRVLIV 211
Query: 235 VEEGGEVGIIEEFVGKEGND-CYWANSVLEVVIGKGGKV 272
+EEG + + F +D + A V+E +G +
Sbjct: 212 LEEGAKAQFL--FCDHAADDRNFLATQVIEAFVGDNANL 248
>gi|386824747|ref|ZP_10111876.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
gi|386378192|gb|EIJ19000.1| FeS assembly protein SufD [Serratia plymuthica PRI-2C]
Length = 428
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-----IQPIT---RPSSSLDVSTDAQFPSLVL 133
Q L WP+RK E +++T + Q I+PIT R + +LD+ DA LV
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPRIEPITAAQRDALALDL--DAY--RLVF 91
Query: 134 IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLG 193
+DG N+AL+ S+L + + + G + + + ++F + A +
Sbjct: 92 VDGRF-NAALSDSDLGEYQFDVTPYGTPQALPEPIQP--------EIFLHLTESLAQETS 142
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG P+YL L + G ++ + R + V +IE +V N
Sbjct: 143 MIRVAAGKIAARPLYL--LHISSGRGVMGEVNTVHHRHHLDVARNARAEVIEHYVSL--N 198
Query: 254 D-CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
D ++ + L IG ++RH L +S + H
Sbjct: 199 DAAHFTGTRLTASIGDNAELRHCKLAFESQASYHF 233
>gi|320161199|ref|YP_004174423.1| protein SufB [Anaerolinea thermophila UNI-1]
gi|319995052|dbj|BAJ63823.1| protein SufB [Anaerolinea thermophila UNI-1]
Length = 470
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 157 LLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKY 211
L + DG+ K F F + F ++N +YVP G KV+ P+ Y
Sbjct: 148 FLSIEDGLRKHPDLFREYFGTVVPIEDNKFAALNSAVWSGGSFVYVPKGVKVDLPL-QAY 206
Query: 212 LSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGK 271
+ N+ + R +++ +EG +V +E + + + V+E+V+ +G +
Sbjct: 207 FRLNVANIGQFE------RTLIIADEGAQVHYVEGCTAPQYTTDSFHSGVIEIVVKRGAR 260
Query: 272 VRHSYLQNQSLNAAHI 287
VR++ +QN S N ++
Sbjct: 261 VRYTTIQNWSNNVYNL 276
>gi|88801810|ref|ZP_01117338.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
gi|88782468|gb|EAR13645.1| FeS assembly protein SufD [Polaribacter irgensii 23-P]
Length = 437
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 23/257 (8%)
Query: 50 IQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
++L + L S + + + + ++R + Q +P++K E +++T + I
Sbjct: 1 MELKDKLIASYVAFENDIDTSSDIHEIRSKAFQNFEGLGFPTKKLEAWKYTSLNSILKQD 60
Query: 110 IQPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+S+ ++ D LV IDG + S+ LS + L+ S
Sbjct: 61 YSLFPNKENSIQLADVQKYFIHDIDTYKLVFIDG--KYSSF-LSETTHDTFDVCLM--SS 115
Query: 163 GIMK-----RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ K + ++ ++ D S+N A + IY+P +VE PI + ++ G
Sbjct: 116 ALAKPKYKAVIENYFNKIARKDNLTSLNTAFANEGAYIYIPRNVEVEKPIQI--INFTTG 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
S+ + PR +++VE+ V IIE N N+V E+ K V +
Sbjct: 174 ---SEAATMLQPRNLIVVEQNAHVQIIERHQSLTSNPV-LTNAVTEIFAAKDATVDIYKI 229
Query: 278 QNQSLNAAHIKWTAVRQ 294
QN A+ I + + Q
Sbjct: 230 QNDHKTASLIDNSYIEQ 246
>gi|255532926|ref|YP_003093298.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
gi|255345910|gb|ACU05236.1| FeS assembly protein SufD [Pedobacter heparinus DSM 2366]
Length = 436
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRV--------SDFISEFQCGDLFW 182
LV ++G + N+ + + V L + G K + S +I D
Sbjct: 90 LVFVNGHFNTALSNIRSSETELTVQPLTEAAQGTYKTIVAAHLNKSSTYIK-----DGVH 144
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGGEV 241
++NG +Y+ G E+P+Y+ ++ +D + I + PR +V V+E +
Sbjct: 145 ALNGAFIAGGVFVYLHKGKLPEHPLYIYHI------LDGRAEHILAQPRSLVYVDESSTL 198
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+ E + +D + N V+E+V+ K V + +QN NA+ + T + Q+
Sbjct: 199 KLTEVYASVGTSDTF-CNEVMELVVEKNAYVEYYKIQNDRANASQVSTTHITQI 251
>gi|241895312|ref|ZP_04782608.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
gi|241871286|gb|EER75037.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella paramesenteroides ATCC 33313]
Length = 469
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G + PI Y + G + R +++V+EGG V +E ++
Sbjct: 190 LYVPKGVHADVPI-QSYFRINAGRTGQFE------RTLIIVDEGGSVNYVEGCTAPNYSE 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVVMSL 300
+V+EV + +GG R++ +QN S N ++ R S+
Sbjct: 243 DSLHAAVVEVFVKQGGYCRYTTIQNWSTNVYSLETKRARAEAAASM 288
>gi|116252325|ref|YP_768163.1| iron-sulfur cluster assembly protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256973|emb|CAK08067.1| putative iron-sulfur cluster assembly protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 442
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 21/267 (7%)
Query: 22 PKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSS 81
P A+ + RV T+ T S + A L ++ LP + LRD
Sbjct: 2 PTSSARRPEFRVERTTSMNMQTTSRLTAAETA--LIEAFNQQIGELPGNGAVTALRDRLL 59
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQN 140
L P+R+ E + +TD +++++ Q S +L+ D L +I G N
Sbjct: 60 DDLKKAGLPTRRIEAWHYTDLKNLLRTVPQQAGDAGSQALEPLVD-DATVLAVIQGH-SN 117
Query: 141 SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAG 200
+ L Y LL DG + + D ING D V+ VPA
Sbjct: 118 QKATVDGLGVSAYSERLL---DG---SAAGGLDALGSDDAVGRINGSFVRDGYVVDVPAD 171
Query: 201 CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANS 260
++E P+ +++ + G +LP+S G + +IE + G D +
Sbjct: 172 TELETPLEIQF--IHAGGQTHTRLPVS-------FGAGVKATVIERHLTVTG-DAALVSH 221
Query: 261 VLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V ++ +G+G ++ LQ Q + H+
Sbjct: 222 VSDITVGEGTELTWIILQQQGADDTHL 248
>gi|15807100|ref|NP_295829.1| hypothetical protein DR_2106 [Deinococcus radiodurans R1]
gi|6459902|gb|AAF11655.1|AE002046_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 468
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 16/134 (11%)
Query: 157 LLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPI--YL 209
L + DG+ + F F + F +IN +Y+P G KV+ P+ Y
Sbjct: 146 FLSIEDGMRQYPDLFREHFATIVPPEDNKFAAINSAVWSGGSFVYIPKGVKVDIPLQTYF 205
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
+ + G + R +++V+EG + IE N + + V+E+V+ +G
Sbjct: 206 RINAESSGQFE---------RTLIIVDEGAQAHYIEGCTAPAYNADSFHSGVIEIVVKEG 256
Query: 270 GKVRHSYLQNQSLN 283
+ R+S +QN S N
Sbjct: 257 ARFRYSTIQNWSHN 270
>gi|424887762|ref|ZP_18311365.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173311|gb|EJC73355.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 424
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 29/227 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D ++A
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSNA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A N DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSAVLAVIQGHA-NQKAAADGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQAHTRLPVT-------FGAGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE + G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 185 ATVIERHLAVTG-DAALVSHVSDIAVGEGAELTWIILQQQGADDTHL 230
>gi|374849932|dbj|BAL52934.1| Fe-S cluster assembly protein SufD [uncultured beta
proteobacterium]
Length = 441
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 41/252 (16%)
Query: 44 FSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQT-LLSTPWPSRKDEPFRFTDT 102
+ P V L E+ +LP S S R +++T LS +P R+DE +++T
Sbjct: 7 IAQPLVAHL-ETYRPTLPESVSE----------RQWAARTRFLSRGFPVRRDEEWKYTS- 54
Query: 103 SMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
+Q I + +L + D P D + A + DG L+ D
Sbjct: 55 -------VQGIANRAFALPDAADV-LPQATPTDHESPHGATHQWRFVDG----HLVAAPD 102
Query: 163 GIMKRVSDFISEFQCGDLFWS--------------INGMGAPDLGVIYVPAGCKVENPIY 208
+ + VS D FW ++ A G + + V P+
Sbjct: 103 SLPEGVSALPLAVALADPFWQERFAALATSEHSSFVDLNTALASGGLCLRIAAPVATPLE 162
Query: 209 LKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
+ + G + +P++ +PR++V+VE G +IE +G + ++ N+V E+++
Sbjct: 163 IVWQVRAGVAGEGAPVPLAVHPRLLVVVEAGASATLIEHAIG-DAASSHFVNAVAEIIVA 221
Query: 268 KGGKVRHSYLQN 279
+ ++ H +Q
Sbjct: 222 RDAQLTHYVVQE 233
>gi|387815488|ref|YP_005430978.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381340508|emb|CCG96555.1| FeS assembly protein SufD [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 428
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPLL--ALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++G + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANGEAEALSAKLGSTLN 126
Query: 178 GD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D F +NG D I + G ++ P+++ + + + PR+ V
Sbjct: 127 HDQVQFARLNGARFEDGLFIRLKPGAVLDQPLFIIH------ETSADASGSAYPRIYVEA 180
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ ++EE+ G ++V E + G V L + N HI T V Q
Sbjct: 181 GANSQLTLVEEYTSS-GEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQ 238
>gi|386857680|ref|YP_006261857.1| ABC transporter ATP-binding protein [Deinococcus gobiensis I-0]
gi|380001209|gb|AFD26399.1| ABC transporter ATP-binding protein [Deinococcus gobiensis I-0]
Length = 468
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 157 LLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPI--YL 209
L + DG+ + F F + F ++N +YVP G KV+ P+ Y
Sbjct: 146 FLSIEDGLKQYPELFREHFATIVPPEDNKFAAVNSAVWSGGSFVYVPKGVKVDIPLQTYF 205
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
+ + G + R +++++EG + IE N + + V+E+V+ +G
Sbjct: 206 RINAESSGQFE---------RTLIIIDEGAQAHYIEGCTAPAYNSDSFHSGVIEIVVKEG 256
Query: 270 GKVRHSYLQNQSLNAAHI 287
+ R+S +QN S N ++
Sbjct: 257 ARFRYSTIQNWSHNVYNL 274
>gi|160883924|ref|ZP_02064927.1| hypothetical protein BACOVA_01898 [Bacteroides ovatus ATCC 8483]
gi|156110654|gb|EDO12399.1| FeS assembly protein SufD [Bacteroides ovatus ATCC 8483]
Length = 447
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|399546249|ref|YP_006559557.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
gi|399161581|gb|AFP32144.1| FeS assembly protein SufD [Marinobacter sp. BSs20148]
Length = 433
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 29/248 (11%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L S+ +LP+PL LR + + L P+RK E ++++ + + + ++S
Sbjct: 12 LQSAGQALPKPLL--ALRANRASALTGLLLPTRKTENWKYSAKHLKLTDDMASSLPLNAS 69
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSNLP-------------DGVYVGSLLGVSDGIMK 166
D Q ++VL++G ++ A N L D LLG K
Sbjct: 70 AGAEADIQGYTVVLVNGVVRPEASNYPALKGLSIQRFSDLDGDDAELAVDLLG------K 123
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+SD ++ +L S+N D +I + G ++ P+++ + + +
Sbjct: 124 SISDQPAKHGSINL-TSLNAARFEDGLLIQLQPGTVLDQPLFVIH------HTSASHSGS 176
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
+ P ++V ++ ++E++V G N+ E +G G + L + N H
Sbjct: 177 AFPCILVAAGSNSQLTLVEDYV-SSGESPVMVNTATEFSLGDGANITSVRLNTEGQNVQH 235
Query: 287 IKWTAVRQ 294
+ T VRQ
Sbjct: 236 MGTTGVRQ 243
>gi|163753693|ref|ZP_02160816.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
gi|161325907|gb|EDP97233.1| iron-regulated ABC transporter, membrane-spanning permease [Kordia
algicida OT-1]
Length = 439
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 23/254 (9%)
Query: 56 LEDSLPSSSSSLPQPL-----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D L SS L L ++R+ + T +PS+KDE +++T + +
Sbjct: 3 LKDKLLSSFMVFEDRLNDESKHLNEIRNEAINTFQQKGFPSKKDEDWKYTSLNALLKHDY 62
Query: 111 QPITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ ++++ D +V IDG + S+ DG+ V + +
Sbjct: 63 CISPQQETAVEFKEIKKYFIHDIDTYKIVFIDG--KYSSFLSETTHDGIDVCLMSSALNK 120
Query: 164 IMKRV---SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVD 220
++ S + + S+N A + I++P VE PI + + S GN
Sbjct: 121 PKYKIIIDSYYNKAAKSDHSLTSLNTAFASEGAYIHIPKNKVVEKPIQIIHFST--GNEA 178
Query: 221 SKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQ 280
+ L PR +++V E V IIE N NSV EV K V + +QN
Sbjct: 179 TLMLQ---PRNLIVVGENSHVQIIERHQSLTSN-VVLTNSVTEVFANKRAIVDYYKIQND 234
Query: 281 SLNAAHIKWTAVRQ 294
+ A+ I T + Q
Sbjct: 235 NQQASLIDNTYISQ 248
>gi|423290619|ref|ZP_17269468.1| FeS assembly protein SufD [Bacteroides ovatus CL02T12C04]
gi|423294115|ref|ZP_17272242.1| FeS assembly protein SufD [Bacteroides ovatus CL03T12C18]
gi|392665272|gb|EIY58800.1| FeS assembly protein SufD [Bacteroides ovatus CL02T12C04]
gi|392676611|gb|EIY70042.1| FeS assembly protein SufD [Bacteroides ovatus CL03T12C18]
Length = 446
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 41 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 99
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 100 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 159
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 160 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 210
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 211 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 249
>gi|285017820|ref|YP_003375531.1| iron ABC transporter permease [Xanthomonas albilineans GPE PC73]
gi|283473038|emb|CBA15543.1| probable abc transporter-associated involved in fe-s cluster
assembly abc transporter protein [Xanthomonas
albilineans GPE PC73]
Length = 420
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 90 PSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPS--LVLIDGFIQNSALNLSN 147
P + E +++T ++ + P ++ ++ + A P+ LV ++G ++ LS
Sbjct: 31 PGPRSEAWKYTSLRALERRRFVPAADAAADVNAAVIASIPAPRLVFVNGRASDALSELSC 90
Query: 148 LPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWSINGMGAPDLGVIYVPAGCKVENP 206
LP GV + L + G + F+ D +F +N A + V+ V AG +VE P
Sbjct: 91 LPCGVALQRLSALLRGGEDAMRFLGRRFERVDEVFARLNAALADEGCVLRVDAGVRVETP 150
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
++L ++S + L + R ++ + + + ++E + E + + +NS+ + +
Sbjct: 151 LHLVFVSTAA----AADLAWHH-RHLIELGQNASLSLVEHHLHLE-DAPHLSNSLAHIHL 204
Query: 267 GKGGKVRHSYLQNQS 281
G ++ H+ +Q +
Sbjct: 205 AAGAQLMHARVQEDA 219
>gi|383111047|ref|ZP_09931865.1| FeS assembly protein SufD [Bacteroides sp. D2]
gi|382949416|gb|EFS31452.2| FeS assembly protein SufD [Bacteroides sp. D2]
Length = 446
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 41 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 99
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 100 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 159
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 160 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 210
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 211 FLATQVIEVFAGENAIFDMYELEETHTSTVRISNLYVKQ 249
>gi|295695245|ref|YP_003588483.1| FeS assembly protein SufD [Kyrpidia tusciae DSM 2912]
gi|295410847|gb|ADG05339.1| FeS assembly protein SufD [Kyrpidia tusciae DSM 2912]
Length = 440
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKE-GN 253
+YVP G +VE P+ + Y + + PI PRV+ +VEEG + ++E + G E G
Sbjct: 162 VYVPKGVRVEAPVLISY------RWEDPRNPIF-PRVLAVVEEGASLTLVETWSGTELGQ 214
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQN 279
+ V E ++ G++R + LQ+
Sbjct: 215 EGASTAVVDEYLVEANGELRVATLQD 240
>gi|299147101|ref|ZP_07040168.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
gi|298514986|gb|EFI38868.1| FeS assembly protein SufD [Bacteroides sp. 3_1_23]
Length = 447
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTSLYFVVNDTFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V++ + V + + D + N A D V YV
Sbjct: 101 NRALPTGNLPEGVIFGSLKEVAEQHPELVKKYYGQLADTSKDGVTAFNTAFAQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE I L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKTIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ A V+EV G+ L+ + I V+Q
Sbjct: 212 FLATQVIEVFAGENAVFDMYELEETHTSTVRISNLYVKQ 250
>gi|399910100|ref|ZP_10778414.1| Fe-S cluster assembly protein SufD [Halomonas sp. KM-1]
Length = 356
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI-SNPRVVVLVEEGG 239
F ++N + V+ + G VE PI L++LS + P+ S+PR++V
Sbjct: 47 FSALNTAFMEEGAVVRLAPGSVVEKPILLQFLS------RANAAPVMSHPRILVEAGARS 100
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ +IE VG E + N V E+++ +G + H LQ L H+ V Q
Sbjct: 101 QATLIEHHVG-ESEAANFTNLVAELMLDRGAILTHYKLQEAPLADLHVASIHVEQ 154
>gi|319760494|ref|YP_004124432.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
gi|318039208|gb|ADV33758.1| FeS cluster assembly protein sufD [Candidatus Blochmannia vafer
str. BVAF]
Length = 430
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I +P + + P+YL L + G +L +SN + E+ IIE FVG N
Sbjct: 146 IKLPKSIETKKPLYL--LHINSGTKIPNQLSLSNSHYYLETEQYTNTSIIEHFVGINENS 203
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
Y N+ ++IGK K+ H L ++ ++ HI
Sbjct: 204 -YLFNTRSSILIGKQSKLNHISLIYENQSSYHI 235
>gi|410615606|ref|ZP_11326625.1| Fe-S cluster assembly protein SufD [Glaciecola psychrophila 170]
gi|410165019|dbj|GAC40514.1| Fe-S cluster assembly protein SufD [Glaciecola psychrophila 170]
Length = 440
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEE 237
D F S+N D +I++P C+V+ P Y+ N+ P +N R++++ E
Sbjct: 141 DYFSSLNSAQLEDGLLIHIPEHCEVDKPFYI-------VNLTQGDQPKTNMMRLLIIAET 193
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQ 278
G + IIE + N+V+E + + HS LQ
Sbjct: 194 GSKATIIEHEDAPLKHTA-MVNTVIECFVNDKAHITHSRLQ 233
>gi|317122849|ref|YP_004102852.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
gi|315592829|gb|ADU52125.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter marianensis DSM 12885]
Length = 466
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 155 GSLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
G + +D +K D + E+ + F ++N IYVP G +VE P+
Sbjct: 141 GVIFCDTDTAVKEYPDLVREYFGTVVPAEDNKFAALNTAVWSGGSFIYVPPGVRVEIPL- 199
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
Y + N+ + R +++V+EG V +E + ++V+E+++ K
Sbjct: 200 QAYFRINAQNMGQFE------RTLIIVDEGAFVHYVEGCTAPIYSTDSLHSAVVEIIVKK 253
Query: 269 GGKVRHSYLQNQSLNAAHI 287
GG+ R++ +QN S N ++
Sbjct: 254 GGRCRYTTIQNWSHNVYNL 272
>gi|218281159|ref|ZP_03487685.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
gi|218217605|gb|EEC91143.1| hypothetical protein EUBIFOR_00246 [Eubacterium biforme DSM 3989]
Length = 470
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G K+E P+ Y + S+ G + R +++V+EG +V +E
Sbjct: 191 IYVPKGVKLEKPLQSYFRINSMSMGQFE---------RTLIVVDEGADVHYVEGCTAPTY 241
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+E+ + K K R+S +QN S N
Sbjct: 242 SKDSLHAAVVEIYVHKNAKCRYSTVQNWSSN 272
>gi|341820485|emb|CCC56766.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Weissella thailandensis fsh4-2]
Length = 469
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G + PI Y + G + R +++V+EGG V +E ++
Sbjct: 190 LYVPKGVHADVPI-QSYFRINAGRTGQFE------RTLIIVDEGGSVNYVEGCTAPNYSE 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
+V+EV + +GG R++ +QN S N ++ R
Sbjct: 243 DSLHAAVVEVFVKQGGYCRYTTIQNWSTNVYSLETKRAR 281
>gi|402487875|ref|ZP_10834690.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
gi|401813043|gb|EJT05390.1| FeS assembly protein SufD [Rhizobium sp. CCGE 510]
Length = 424
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ + LP + LRD L P+R+ E + +TD + +
Sbjct: 15 ALIEAFNNQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRA------ 68
Query: 115 RPSSSLDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVS 169
P D +DA P S VL IQ A N DG+ V + S+ ++ +
Sbjct: 69 LPPQVGDAGSDALEPLAGGSTVL--AVIQGHA-NQKAAADGLGVSAY---SEHLLDGSAA 122
Query: 170 DFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP 229
D + D ING D V+ VPA +E P+ ++++ GG V + +LP++
Sbjct: 123 DGLDALDSDDAVGRINGSFVRDGYVVDVPADTALEGPLEIQFVHA-GGQVHT-RLPVA-- 178
Query: 230 RVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G + +IE + G D + V ++ +G+G ++ LQ Q H+
Sbjct: 179 -----FGAGVKATVIERHLTVTG-DAALVSHVSDITVGEGAELTWIILQQQGAEDTHL 230
>gi|365898208|ref|ZP_09436178.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365421018|emb|CCE08720.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 438
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 43/242 (17%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI-------------QPI 113
LP + LR + P R+ E +++TD + +
Sbjct: 25 LPGKGRVADLRREAFAAFERAGLPHRRVEEWKYTDLRALMRELLPQAAAPDAAALARAKA 84
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
PS ++D +T LVL+DG + L DG+ GVS ++ V + S
Sbjct: 85 ALPSVTIDGAT-----RLVLVDGMFA------AELSDGIQA----GVSVRTLRDVLENES 129
Query: 174 EFQCGDLFW--------SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
GDL S+N A D V+ + G ++ P+ + +++ G
Sbjct: 130 NEARGDLLLTTSTDAMISLNAALATDGVVVGIADGVQLSAPLQIIHVATAGKTS------ 183
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
R + V +G ++E V EG + Y AN + IG G ++ H L + +A
Sbjct: 184 -RYTRSHLQVGKGARATLVETCVAAEGANAYQANDAAVIWIGDGVELSHIRLMRDAPDAF 242
Query: 286 HI 287
++
Sbjct: 243 NV 244
>gi|53711559|ref|YP_097551.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|52214424|dbj|BAD47017.1| putative ABC transporter permease protein [Bacteroides fragilis
YCH46]
Length = 447
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYV 197
N L S LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 101 NQVLPKSGLPEGVIFGSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P V+ PI L +++ +V+ + N RV++++EEG + ++
Sbjct: 161 PKNVIVDRPIQL--VNILRADVNF----MVNRRVLIILEEGAQARLL 201
>gi|226355170|ref|YP_002784910.1| hypothetical protein Deide_03340 [Deinococcus deserti VCD115]
gi|226317160|gb|ACO45156.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 468
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
L + DG M++ + E+ + F +IN +YVP G KV+ P+ Y
Sbjct: 146 FLSIEDG-MRQYPEMFREYFATVVPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + G + R +++++EG + IE N + + V+E+++ +
Sbjct: 205 FRINAESSGQFE---------RTLIIIDEGAQAHYIEGCTAPAYNADSFHSGVIEIIVKE 255
Query: 269 GGKVRHSYLQNQSLNAAHI 287
G + R+S +QN S N ++
Sbjct: 256 GARFRYSTIQNWSHNVYNL 274
>gi|336407754|ref|ZP_08588250.1| FeS assembly protein SufD [Bacteroides sp. 2_1_56FAA]
gi|423248230|ref|ZP_17229246.1| FeS assembly protein SufD [Bacteroides fragilis CL03T00C08]
gi|423253179|ref|ZP_17234110.1| FeS assembly protein SufD [Bacteroides fragilis CL03T12C07]
gi|423269880|ref|ZP_17248852.1| FeS assembly protein SufD [Bacteroides fragilis CL05T00C42]
gi|423272665|ref|ZP_17251612.1| FeS assembly protein SufD [Bacteroides fragilis CL05T12C13]
gi|335944833|gb|EGN06650.1| FeS assembly protein SufD [Bacteroides sp. 2_1_56FAA]
gi|392657079|gb|EIY50716.1| FeS assembly protein SufD [Bacteroides fragilis CL03T12C07]
gi|392660337|gb|EIY53951.1| FeS assembly protein SufD [Bacteroides fragilis CL03T00C08]
gi|392700726|gb|EIY93888.1| FeS assembly protein SufD [Bacteroides fragilis CL05T00C42]
gi|392708742|gb|EIZ01847.1| FeS assembly protein SufD [Bacteroides fragilis CL05T12C13]
Length = 451
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + +++ P SL + D F
Sbjct: 46 FPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFY- 104
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N L S LP+GV GSL +++ + V + + D + N A D ++YV
Sbjct: 105 NQVLPKSGLPEGVIFGSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMYV 164
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P V+ PI L +++ +V+ + N RV++++EEG + ++
Sbjct: 165 PKNVIVDRPIQL--VNILRADVNF----MVNRRVLIILEEGAQARLL 205
>gi|163849014|ref|YP_001637058.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222526976|ref|YP_002571447.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
gi|163670303|gb|ABY36669.1| FeS assembly protein SufB [Chloroflexus aurantiacus J-10-fl]
gi|222450855|gb|ACM55121.1| FeS assembly protein SufB [Chloroflexus sp. Y-400-fl]
Length = 471
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPI--YLKYL 212
+D +K +F E+ + + ++N +YVP G KV+ P+ Y +
Sbjct: 152 TDTALKEYPEFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRIN 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ G + R +++++EG E IE + ++V+EV++ KGGK
Sbjct: 212 AERMGQFE---------RTLIIIDEGAEAHYIEGCTAPIYSTNSLHSAVVEVIVKKGGKF 262
Query: 273 RHSYLQNQSLN 283
R++ +QN + N
Sbjct: 263 RYTTIQNWANN 273
>gi|320334856|ref|YP_004171567.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
gi|319756145|gb|ADV67902.1| FeS assembly protein SufB [Deinococcus maricopensis DSM 21211]
Length = 467
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 157 LLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPI--YL 209
L + DG+ + F F + F +IN +YVP G KV+ P+ Y
Sbjct: 145 FLSIEDGLRQYPELFREHFATVVPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTYF 204
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
+ + G + R +++V+EG + IE N + + V+E+++ G
Sbjct: 205 RINAESSGQFE---------RTLIIVDEGAQAHYIEGCTAPAYNSDSFHSGVIEIIVKPG 255
Query: 270 GKVRHSYLQNQSLN 283
+ R+S +QN S N
Sbjct: 256 ARFRYSTIQNWSHN 269
>gi|219847877|ref|YP_002462310.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
gi|219542136|gb|ACL23874.1| FeS assembly protein SufB [Chloroflexus aggregans DSM 9485]
Length = 471
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 161 SDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPI--YLKYL 212
+D +K +F E+ + + ++N +YVP G KV+ P+ Y +
Sbjct: 152 TDTALKEYPEFFKEYFGTIVPAADNKYAALNTAVWSGGSFVYVPKGVKVDIPLQAYFRIN 211
Query: 213 SVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
+ G + R +++++EG E IE + ++V+EV++ KGGK
Sbjct: 212 AERMGQFE---------RTLIIIDEGAEAHYIEGCTAPIYSTNSLHSAVVEVIVKKGGKF 262
Query: 273 RHSYLQNQSLN 283
R++ +QN + N
Sbjct: 263 RYTTIQNWANN 273
>gi|194015426|ref|ZP_03054042.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
gi|194012830|gb|EDW22396.1| FeS assembly protein SufB [Bacillus pumilus ATCC 7061]
Length = 465
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPLQ-AYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG R++ +QN + N
Sbjct: 239 NSLHSAVVEIVVKKGGYCRYTTIQNWANN 267
>gi|270261597|ref|ZP_06189870.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|421783260|ref|ZP_16219711.1| feS assembly protein SufD [Serratia plymuthica A30]
gi|270045081|gb|EFA18172.1| FeS assembly protein SufD [Serratia odorifera 4Rx13]
gi|407754700|gb|EKF64832.1| feS assembly protein SufD [Serratia plymuthica A30]
Length = 428
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRP-----SSSLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T + Q ++P P +L ++ DA LV +D
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPQAEPIAAAQRDALALNLDAY--RLVFVD 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G N+AL+ S+L + + + G + + + ++F + A + +I
Sbjct: 94 GRF-NAALSDSDLGEYQFEVTPYGTPQALPEPIQP--------EIFLHLTESLAQETSMI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND- 254
V AG P+YL L + G ++ + R + V +IE +V ND
Sbjct: 145 RVAAGKIAARPLYL--LHISSGRGAEGEVNTVHHRHHLDVGRNARAEVIEHYVSL--NDA 200
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++ + L IG ++RH L +S + H
Sbjct: 201 AHFTGARLTASIGDNAELRHCKLAFESQASYHF 233
>gi|153809155|ref|ZP_01961823.1| hypothetical protein BACCAC_03465 [Bacteroides caccae ATCC 43185]
gi|423220445|ref|ZP_17206940.1| FeS assembly protein SufD [Bacteroides caccae CL03T12C61]
gi|149128131|gb|EDM19351.1| FeS assembly protein SufD [Bacteroides caccae ATCC 43185]
gi|392623522|gb|EIY17625.1| FeS assembly protein SufD [Bacteroides caccae CL03T12C61]
Length = 449
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++TD S + +++ P DV + V+ D F
Sbjct: 44 FPTRKMEKYKYTDVSKYFEPDFGLNLNRLAIPVNPYEVFKCDVPNMSTALYFVVNDAFY- 102
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
+ AL S+LP+GV GSL V+ + V + + D + N A D + YV
Sbjct: 103 DKALPKSHLPEGVIFGSLKEVARQHPELVKKYYGKLADTSKDGVTAFNTTFAQDGVIFYV 162
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 163 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 213
Query: 256 YWANSVLEVVIGKG 269
+ A V+EV G+
Sbjct: 214 FLATQVIEVFAGEN 227
>gi|375255387|ref|YP_005014554.1| FeS assembly protein SufD [Tannerella forsythia ATCC 43037]
gi|363406529|gb|AEW20215.1| FeS assembly protein SufD [Tannerella forsythia ATCC 43037]
Length = 458
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 40 PQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRF 99
P+ + D F ED L + + L Q L D T +PS E +R+
Sbjct: 14 PEKQYMDFFTQH-----EDVLHRYAPAFMNALRTQALAD-----FERTGFPSPLHEDYRY 63
Query: 100 TDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP--- 149
TD + + +++ T PS SL F+ N +L LP
Sbjct: 64 TDVAKAFAPDYGLNLTRLHVPTNPSDVFRCDVPNMSTSLY----FVVNDSLYTDTLPKTS 119
Query: 150 --DGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDLFWSINGMGAPDLGVIYVPAGCKVEN 205
+ VY G + ++ + S + + D ++N M A D V+YVP G VE
Sbjct: 120 LSEEVYAGGMHAFAELHPEIASRYYGKAADTSADAVSALNTMLAQDGFVLYVPRGVHVER 179
Query: 206 PIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
P+ L +++ VD ++N RV++++E
Sbjct: 180 PVQL--INIFRSTVD----LMANRRVLIIIE 204
>gi|328951402|ref|YP_004368737.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
gi|328451726|gb|AEB12627.1| FeS assembly protein SufB [Marinithermus hydrothermalis DSM 14884]
Length = 467
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
+ + DG +K D E+ + F ++N +Y+P G +VE P+ Y
Sbjct: 145 FVSIEDG-LKNYEDLFKEYFGTVVPPEDNKFAALNAAVWSGGSFVYIPPGVEVELPLQAY 203
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + E G + R +++V+EG +V IE + + + V+E+V+ K
Sbjct: 204 FRVNTAELGQFE---------RTLIIVDEGAKVHYIEGCTAPTYSTDSFHSGVIEIVVKK 254
Query: 269 GGKVRHSYLQNQSLN 283
G R++ +QN S N
Sbjct: 255 GATSRYTTIQNWSHN 269
>gi|90962851|ref|YP_536766.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|301300115|ref|ZP_07206331.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90822045|gb|ABE00683.1| ABC transporter-associated protein [Lactobacillus salivarius
UCC118]
gi|300852289|gb|EFK79957.1| FeS assembly protein SufB [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 467
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE PI Y + GN + R +++V+EG V +E +
Sbjct: 188 IYVPKGVKVETPI-QSYFRINAGNSGQFE------RTLIIVDEGASVNYVEGCTAPNYSQ 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+V+EV + K R++ +QN S N ++ R L
Sbjct: 241 DSLHAAVVEVNVLKDAYCRYTTIQNWSNNVYSLETKRARAL 281
>gi|237709448|ref|ZP_04539929.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754647|ref|ZP_06089699.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
gi|423230284|ref|ZP_17216688.1| FeS assembly protein SufD [Bacteroides dorei CL02T00C15]
gi|423240992|ref|ZP_17222106.1| FeS assembly protein SufD [Bacteroides dorei CL03T12C01]
gi|423243993|ref|ZP_17225068.1| FeS assembly protein SufD [Bacteroides dorei CL02T12C06]
gi|229456504|gb|EEO62225.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234761|gb|EEZ20329.1| FeS assembly protein SufD [Bacteroides sp. 3_1_33FAA]
gi|392631440|gb|EIY25412.1| FeS assembly protein SufD [Bacteroides dorei CL02T00C15]
gi|392643054|gb|EIY36812.1| FeS assembly protein SufD [Bacteroides dorei CL03T12C01]
gi|392643276|gb|EIY37028.1| FeS assembly protein SufD [Bacteroides dorei CL02T12C06]
Length = 447
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA-- 142
+P+RK E +++TD S + + + P + +V P++ F+ N A
Sbjct: 42 FPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVFK-CDVPNMSTALYFVVNDAFY 100
Query: 143 ---LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
L + LP+GV +GSL +S+ V + + D + N A D ++YV
Sbjct: 101 RKVLPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P G V+ PI L +++ +V+ + N RV+V++EE + ++
Sbjct: 161 PKGVVVDKPIQL--VNILRADVNF----MVNRRVLVVLEESAQARLL 201
>gi|227892247|ref|ZP_04010052.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
gi|417788887|ref|ZP_12436568.1| iron-sulfur cluster assembly protein SufB [Lactobacillus salivarius
NIAS840]
gi|417810831|ref|ZP_12457505.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius GJ-24]
gi|418962047|ref|ZP_13513929.1| ABC transporter-associated protein [Lactobacillus salivarius
SMXD51]
gi|227865969|gb|EEJ73390.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius ATCC 11741]
gi|334307043|gb|EGL98031.1| iron-sulfur cluster assembly protein SufB [Lactobacillus salivarius
NIAS840]
gi|335348101|gb|EGM49608.1| ABC superfamily ATP binding cassette transporter-associated protein
[Lactobacillus salivarius GJ-24]
gi|380343454|gb|EIA31805.1| ABC transporter-associated protein [Lactobacillus salivarius
SMXD51]
Length = 467
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE PI Y + GN S + R +++V+EG V +E +
Sbjct: 188 IYVPKGVKVETPI-QSYFRINAGN--SGQF----ERTLIIVDEGASVNYVEGCTAPNYSQ 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+V+EV + K R++ +QN S N ++ R L
Sbjct: 241 DSLHAAVVEVNVLKDAYCRYTTIQNWSNNVYSLETKRARAL 281
>gi|345514493|ref|ZP_08794004.1| FeS assembly protein SufD [Bacteroides dorei 5_1_36/D4]
gi|345455961|gb|EEO46767.2| FeS assembly protein SufD [Bacteroides dorei 5_1_36/D4]
Length = 447
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA-- 142
+P+RK E +++TD S + + + P + +V P++ F+ N A
Sbjct: 42 FPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVFK-CDVPNMSTALYFVVNDAFY 100
Query: 143 ---LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
L + LP+GV +GSL +S+ V + + D + N A D ++YV
Sbjct: 101 RKVLPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P G V+ PI L +++ +V+ + N RV+V++EE + ++
Sbjct: 161 PKGVVVDKPIQL--VNILRADVNF----MVNRRVLVVLEESAQARLL 201
>gi|212692752|ref|ZP_03300880.1| hypothetical protein BACDOR_02250 [Bacteroides dorei DSM 17855]
gi|212664688|gb|EEB25260.1| FeS assembly protein SufD [Bacteroides dorei DSM 17855]
Length = 447
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSA-- 142
+P+RK E +++TD S + + + P + +V P++ F+ N A
Sbjct: 42 FPTRKQEKYKYTDVSKLFEPDYGLNLNRLDIPVNPYEVFK-CDVPNMSTALYFVVNDAFY 100
Query: 143 ---LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
L + LP+GV +GSL +S+ V + + D + N A D ++YV
Sbjct: 101 RKVLPKAQLPEGVLLGSLKELSEQYPALVKQYYGKLADTSKDGVTAFNTTFAQDGFMLYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
P G V+ PI L +++ +V+ + N RV+V++EE + ++
Sbjct: 161 PKGVVVDKPIQL--VNILRADVNF----MVNRRVLVVLEESAQARLL 201
>gi|408380481|ref|ZP_11178065.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
gi|407745694|gb|EKF57226.1| FeS assembly protein SufD [Agrobacterium albertimagni AOL15]
Length = 425
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
L D+ + SLP + RD L P+R+ E F +TD + + P
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLKRDGLFDALKRQGLPTRRVETFHYTDLKALLRA--LPADE 73
Query: 116 PSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSDFISE 174
P + T S + +Q A S LPDG+ + +S G +D ++
Sbjct: 74 PQAV--AKTVDPLVSGAHVLNVLQGVAQRPSALPDGLSIALYRDALSTGA---AADGLTA 128
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
F D +NG D + V ++E PI L+ + G +L + P
Sbjct: 129 FNADDTIGRLNGAFVRDGFTLDVAEDTEIEAPIELQSVHAAG------QLHLRFP---AT 179
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+G + +IE VG+ G+ A+ V ++ +G+G ++ LQ + H+
Sbjct: 180 FGKGSKATVIERHVGQSGS-AALASVVADLKLGEGAEITWIILQGEGDADTHL 231
>gi|399949807|gb|AFP65464.1| Fe-S cluster assembly protein SufD [Chroomonas mesostigmatica
CCMP1168]
Length = 486
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 23/259 (8%)
Query: 32 RVSLQTTF-PQATFSDPFVIQLAESLEDSLPSS--------SSSLPQPLPLQKLRDSSSQ 82
++SL+ +F + F D F + L+ S S S + + + LR
Sbjct: 33 KISLKNSFFRKKFFYDSFKMNTIRKLDSSTDKSKWLDSILLSKKVKKTSFINNLRKIGLT 92
Query: 83 TLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS---TDAQFPSLVLIDGFIQ 139
L +T PS+KDE +RFT + + + I + VS + +V I+G
Sbjct: 93 LLKNTRIPSKKDESWRFTSLDQLFNMEFSDIIVEENDDFVSKYIMENSVARIVFINGVFS 152
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG--DLFWSINGMGAPD-LGVIY 196
+L + + + K++S I + + G F+ I M D + V+
Sbjct: 153 FKFSSLDPISKKFLLQKFSELDIEKQKKISKLIGKGESGINGGFFPILNMACLDEIVVLS 212
Query: 197 VPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+ + ++E PI + + + N P+ N +++VL E+ + +IE+ V + ++
Sbjct: 213 LSSDLRLEKPIQIVFAGSKTKN------PVCLNQKIIVLGEKHAKATVIEQHVSSDDSE- 265
Query: 256 YWANSVLEVVIGKGGKVRH 274
++ NS + + +G ++ +
Sbjct: 266 FFDNSTTNIFLEEGAELNY 284
>gi|387907352|ref|YP_006337688.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582245|gb|AFJ91023.1| FeS assembly protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 430
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 167 RVSDFISEFQCG-DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLP 225
+ +F + C D F+++N + + D IY+P +ENPI + ++S ++SK +
Sbjct: 121 EIRNFYGKLSCKYDAFYTLNTIFSKDGAYIYIPNNVILENPIEILHIST---GIESKIML 177
Query: 226 ISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAA 285
N R ++++ E V IIE + + + NSV E+ + + +QN + +
Sbjct: 178 --NNRNLIVIGEHSSVKIIEHYKCLRKHFA-FINSVSEIYAMDCSVIDYYKIQNDLVETS 234
Query: 286 HIKWTAVRQ 294
I T ++Q
Sbjct: 235 IIDNTFLKQ 243
>gi|325109894|ref|YP_004270962.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
gi|324970162|gb|ADY60940.1| Iron-regulated ABC transporter membrane component SufB
[Planctomyces brasiliensis DSM 5305]
Length = 471
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G ++E P+ Y + ++ G + R +++V+EG V +E
Sbjct: 192 IYVPPGVEIEFPLQAYFRINTMNMGQFE---------RTLIIVDEGAAVHYVEGCTAPTY 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ ++V+E+++ +GG+ R++ +QN S N ++
Sbjct: 243 SSDSLHSAVVEIIVKRGGRCRYTTIQNWSNNVYNL 277
>gi|433607986|ref|YP_007040355.1| FeS assembly protein SufB [Saccharothrix espanaensis DSM 44229]
gi|407885839|emb|CCH33482.1| FeS assembly protein SufB [Saccharothrix espanaensis DSM 44229]
Length = 481
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 202 IYVPKGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYSS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG+ R++ +QN S N
Sbjct: 255 DSLHSAVVEIVVKKGGRCRYTTIQNWSNN 283
>gi|52081752|ref|YP_080543.1| FeS assembly protein SufB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319647669|ref|ZP_08001887.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
gi|404490636|ref|YP_006714742.1| FeS cluster assembly protein SufB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423683749|ref|ZP_17658588.1| FeS assembly protein SufB [Bacillus licheniformis WX-02]
gi|52004963|gb|AAU24905.1| FeS assembly protein SufB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52349641|gb|AAU42275.1| FeS cluster assembly protein SufB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317390010|gb|EFV70819.1| ABC transporter-associated protein [Bacillus sp. BT1B_CT2]
gi|383440523|gb|EID48298.1| FeS assembly protein SufB [Bacillus licheniformis WX-02]
Length = 465
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANN 267
>gi|407978738|ref|ZP_11159566.1| ABC transporter ATP-binding protein [Bacillus sp. HYC-10]
gi|407414769|gb|EKF36399.1| ABC transporter ATP-binding protein [Bacillus sp. HYC-10]
Length = 465
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANN 267
>gi|325283588|ref|YP_004256129.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
gi|324315397|gb|ADY26512.1| FeS assembly protein SufB [Deinococcus proteolyticus MRP]
Length = 468
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 18/139 (12%)
Query: 157 LLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--Y 208
L + DG M+ + E+ + F ++N +YVP G KV+ P+ Y
Sbjct: 146 FLSIEDG-MREYPELFREYFATVVPPEDNKFAAVNSAVWSGGSFVYVPKGVKVDIPLQTY 204
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
+ + G + R ++++EEG + IE + + + V+E+V+ +
Sbjct: 205 FRINAENSGQFE---------RTLIIIEEGAQAHYIEGCTAPAYSSDSFHSGVIEIVVKE 255
Query: 269 GGKVRHSYLQNQSLNAAHI 287
G + R+S +QN S N ++
Sbjct: 256 GARFRYSTIQNWSHNVYNL 274
>gi|157693675|ref|YP_001488137.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
gi|389574327|ref|ZP_10164391.1| ABC transporter ATP-binding protein [Bacillus sp. M 2-6]
gi|157682433|gb|ABV63577.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus SAFR-032]
gi|388425935|gb|EIL83756.1| ABC transporter ATP-binding protein [Bacillus sp. M 2-6]
Length = 465
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANN 267
>gi|90407344|ref|ZP_01215529.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
gi|90311495|gb|EAS39595.1| hypothetical protein PCNPT3_03882 [Psychromonas sp. CNPT3]
Length = 486
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + S + G + R +++ +
Sbjct: 184 NFFAALNAAVASDGTFVYIPKGVHCPMELSTYFRINSAQTGQFE---------RTILIAD 234
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 235 EGSYVSYIEGCSAPSHDTYQLHAAVVEVIILKDAQVKYSTVQN 277
>gi|375089886|ref|ZP_09736211.1| FeS assembly protein SufB [Facklamia languida CCUG 37842]
gi|374566733|gb|EHR37972.1| FeS assembly protein SufB [Facklamia languida CCUG 37842]
Length = 464
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G KV+ P+ Y + NV + R +++V+EG V +E ++
Sbjct: 185 IYIPKGVKVDMPL-QAYFRLNNANVGQFE------RTLIIVDEGASVHYVEGCTAPTYSE 237
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V+E+V+ K R++ +QN S N ++
Sbjct: 238 TSMHTGVIEIVVMKDATCRYTTIQNWSHNVYNL 270
>gi|148654873|ref|YP_001275078.1| FeS assembly protein SufB [Roseiflexus sp. RS-1]
gi|148566983|gb|ABQ89128.1| Iron-regulated ABC transporter membrane component SufB [Roseiflexus
sp. RS-1]
Length = 471
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEEG V IE +
Sbjct: 192 VYVPKGVHVDIPL-QAYFRINAENMGQFE------RTLIIVEEGASVHYIEGCTAPIYST 244
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGGK R++ +QN + N
Sbjct: 245 NSLHSAVVEIIVMKGGKCRYTTIQNWANN 273
>gi|238749442|ref|ZP_04610947.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
gi|238712097|gb|EEQ04310.1| hypothetical protein yrohd0001_27590 [Yersinia rohdei ATCC 43380]
Length = 407
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 24/201 (11%)
Query: 87 TPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLS 146
TP F F DT+++ ++Q L + DA LV IDG A LS
Sbjct: 36 TPLERLLAHNFSFADTAVVTAAQ-------RDQLSLVQDAH--RLVFIDG---RYAPELS 83
Query: 147 NLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENP 206
+ G Y + L + I + ++F + A + I +PAG + P
Sbjct: 84 DNECGPYQLTPLTENTPIPAAIQ--------SEVFLHLTESLAQEALHIRLPAGKHSDKP 135
Query: 207 IYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVI 266
+YL ++S G ++ + S+ R + +E G + +IE FV ++ ++ + L + +
Sbjct: 136 LYLLHISSGKG---TEVVNTSHYRHHLAIESGAQAEVIEHFVSL-NDEAHFTGARLTLAV 191
Query: 267 GKGGKVRHSYLQNQSLNAAHI 287
G ++ H L ++ ++ H
Sbjct: 192 GDNAELNHCKLAFETPHSYHF 212
>gi|51893173|ref|YP_075864.1| hypothetical protein STH2035 [Symbiobacterium thermophilum IAM
14863]
gi|51856862|dbj|BAD41020.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 382
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 36/220 (16%)
Query: 66 SLPQPLPLQKLRDSSSQTLLST-PWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVST 124
++ +P L++ R ++QTL T P++ DE +R T + Q +P ++ V+
Sbjct: 3 TVTEPRFLEE-RRKAAQTLTETLSLPAKTDEAWRRTSLEGLDVLQYRP-----TAARVTL 56
Query: 125 DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSI 184
P V+ + +A + + Y+G L + + ++ Q L +
Sbjct: 57 KGSVPEGVVFANLLDAAAEHAELVQR--YLGRLFPMD-------QNLLTAAQAAHLNGGV 107
Query: 185 NGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGII 244
++YVP G VE P+ + + + +G +++ L +V+ E+ EV ++
Sbjct: 108 ---------LLYVPRGVVVEEPLEVVFEAQDG---EAQYL-----HTLVIAEDNAEVTLL 150
Query: 245 EEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNA 284
E + EG Y + V+EV +G +VR+ YLQN S +A
Sbjct: 151 ERY---EGTGDYLSVHVVEVFPLQGARVRYGYLQNHSQDA 187
>gi|297622513|ref|YP_003703947.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
gi|297163693|gb|ADI13404.1| FeS assembly protein SufB [Truepera radiovictrix DSM 17093]
Length = 469
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVPAG ++E P+ +L ++++ + R +++ EEG + IE N
Sbjct: 190 VYVPAGVEIEVPLQAYFL------INAQSMG-QFERTLIIGEEGSKFHYIEGCTAPTYNS 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ + V+E++ +G +VR+S +QN S N
Sbjct: 243 DSFHSGVIEIICKEGSQVRYSTIQNWSHN 271
>gi|256851339|ref|ZP_05556728.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260660764|ref|ZP_05861679.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|297206210|ref|ZP_06923605.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
gi|256616401|gb|EEU21589.1| FeS assembly protein SufD [Lactobacillus jensenii 27-2-CHN]
gi|260548486|gb|EEX24461.1| FeS assembly protein SufD [Lactobacillus jensenii 115-3-CHN]
gi|297149336|gb|EFH29634.1| iron-sulfur ABC superfamily ATP binding cassette transporter,
membrane protein [Lactobacillus jensenii JV-V16]
Length = 409
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 69 QPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK--------SSQIQPITRPSSSL 120
+P ++R+++SQ + TP+P K ++ D + +S+ + +
Sbjct: 13 EPTWFSEIRENASQLIGKTPYPDFKKLKYKHWDLHLTGNFIPTESFASKANVVQAGENLA 72
Query: 121 DVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL 180
++ ++ +I ++ N L ++ L SD + +++ ++ Q G L
Sbjct: 73 QINIPDEYRKKGVIVADFHDALQNYPKLIKKYFMTKGLKASDD--EFLAEHVAYLQSG-L 129
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F IYVP VE P+ +YL + + S+ + V+++V+EG
Sbjct: 130 F-------------IYVPKNVHVETPLTCEYL--QKAALGSEYVH----HVLLIVDEGSN 170
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
IE+ +GN+ N V EV+ K V ++ + N + N
Sbjct: 171 FSYIEKLTS-QGNEASKVNFVCEVIAKKNSHVHYTSIDNLAEN 212
>gi|400406203|ref|YP_006588951.1| FeS assembly protein SufB [secondary endosymbiont of Heteropsylla
cubana]
gi|400364456|gb|AFP85523.1| FeS assembly protein SufB [secondary endosymbiont of Heteropsylla
cubana]
Length = 502
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + S + G + R +++ +
Sbjct: 199 NFFAALNSAVASDGTFVYVPKGVHCPMELSTYFRINSAQTGQFE---------RTILIAD 249
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE N +V+EV++ K +V++S +QN
Sbjct: 250 EGSYVSYIEGCSAPIRNSYQLHAAVVEVIVLKNAEVKYSTVQN 292
>gi|374599262|ref|ZP_09672264.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|423324406|ref|ZP_17302247.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
gi|373910732|gb|EHQ42581.1| FeS assembly protein SufD [Myroides odoratus DSM 2801]
gi|404608498|gb|EKB07962.1| FeS assembly protein SufD [Myroides odoratimimus CIP 103059]
Length = 439
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 31/258 (12%)
Query: 56 LEDSLPSSSSSLPQPL-----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
L+D L +S + Q L L +R +T +P++K+E +++T + I
Sbjct: 3 LKDKLITSFVAFEQQLSGEHDTLHNIRLEGLKTFEDKGFPTKKEEAWKYTSLNSILKQDF 62
Query: 111 QPITRPSSSLDVS-------TDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDG 163
+ + ++D +D+ LV I+G + +S L+ S DG+ V + S
Sbjct: 63 CVVPKKEVAVDYKDVKQYFLSDSDTYKLVFING-VFSSHLS-STTHDGLDVCLM---SSA 117
Query: 164 IMK-RVSDFISEF-----QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ K + I + D ++N A + + +P V PI + YLS G
Sbjct: 118 LTKPKYKMLIDTYYNTITDKEDSLTALNAAYAVEGAFVNIPKSKVVSKPIEIVYLSTAG- 176
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC-YWANSVLEVVIGKGGKVRHSY 276
++ + PR +++V E V I+E + ++C + NSV E+ K V
Sbjct: 177 ----EQALLVQPRNLIIVGENAHVQILERH--QSLDECSIFTNSVTEIFSHKRAIVDFYK 230
Query: 277 LQNQSLNAAHIKWTAVRQ 294
LQN I T ++Q
Sbjct: 231 LQNDLDTGTLIDNTFIKQ 248
>gi|258647680|ref|ZP_05735149.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
gi|260852509|gb|EEX72378.1| putative ABC transporter protein [Prevotella tannerae ATCC 51259]
Length = 451
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVST 124
P+ R+ ++ L P+ K E +++TD + +I P + +
Sbjct: 25 PMNNRREEAAALLTEKGLPTAKTERYKYTDVEAAFAPDFGLNLKRIPLEIDPYETYRCTI 84
Query: 125 DAQFP-SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLF 181
+ + +++ + ++ + + LP G+ V SL+ V+ + + F + + D
Sbjct: 85 EHLGAWNYYVVNDTVAPASHDSAALPQGIIVDSLVNVAAKRPELLEKFYHQAAGKSYDGV 144
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
++N + A D +IY+P+G + E + + ++V +D +SN RV++++EE +
Sbjct: 145 TALNTLLAQDGLLIYIPSGVEAERAVQI--VNVSASTIDF----MSNRRVLIVLEENAKA 198
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKV 272
++ EG Y V+EV +G ++
Sbjct: 199 TVLFCDHALEGRH-YLTTEVVEVFAEQGAEL 228
>gi|325299865|ref|YP_004259782.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
gi|324319418|gb|ADY37309.1| FeS assembly protein SufD [Bacteroides salanitronis DSM 18170]
Length = 447
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSS--SLDVSTDAQFPSLVLIDGFIQ 139
+P+RK E +++T+ + ++++ P DV + V+ D F +
Sbjct: 42 FPTRKQEKYKYTEVGKYFAPDFGLNLNRLEFPVNPYEVFKCDVPNMSTSLYFVINDSFDK 101
Query: 140 NSALNLSNLPDGVYVGSLLGVS----DGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
+ + + LP+GV GSL ++ D I + G + N M A D ++
Sbjct: 102 HDHPS-AQLPEGVLFGSLKELAVQHPDLIKNHYGKLADTSKDG--LTAFNTMFAQDGVLM 158
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND- 254
YVP +E PI L +++ +VD+ +SN R+++++EEG + ++ V D
Sbjct: 159 YVPKNVVIEKPIQL--VNILRADVDT----LSNRRLLIILEEGAQAKLL---VCDHAMDN 209
Query: 255 -CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQLVV 297
+ + V EV +G+ ++Y L H QL V
Sbjct: 210 VNFLSTQVTEVFVGE-----NAYFDLYELEETHNSTVRFSQLFV 248
>gi|414074813|ref|YP_007000030.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris UC509.9]
gi|413974733|gb|AFW92197.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris UC509.9]
Length = 470
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G K E PI Y + + + G + R +++VEEG + +E
Sbjct: 191 VYVPKGVKCEIPIQAYFRINNEKSGQFE---------RTLIIVEEGASIQYVEGCTAPTY 241
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +V+E+ + +GG +R+S +QN S N ++
Sbjct: 242 SASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNL 276
>gi|156740330|ref|YP_001430459.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
gi|156231658|gb|ABU56441.1| FeS assembly protein SufB [Roseiflexus castenholzii DSM 13941]
Length = 471
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEEG V IE +
Sbjct: 192 VYVPKGVHVDIPL-QAYFRINAENMGQFE------RTLIIVEEGASVHYIEGCTAPIYST 244
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGGK R++ +QN + N
Sbjct: 245 NSLHSAVVEIIVMKGGKCRYTTIQNWANN 273
>gi|15673770|ref|NP_267945.1| hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|125624747|ref|YP_001033230.1| hypothetical protein llmg_1969 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492381|ref|YP_003354361.1| cysteine desulfurase activator complex subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|385831267|ref|YP_005869080.1| Fe-S cluster assembly protein SufB [Lactococcus lactis subsp.
lactis CV56]
gi|385837610|ref|YP_005875240.1| Iron-sulfur cluster assembly protein SufB [Lactococcus lactis
subsp. cremoris A76]
gi|389855124|ref|YP_006357368.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris NZ9000]
gi|418037783|ref|ZP_12676150.1| hypothetical protein LLCRE1631_00957 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12724812|gb|AAK05886.1|AE006408_10 hypothetical protein L29491 [Lactococcus lactis subsp. lactis
Il1403]
gi|124493555|emb|CAL98539.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376045|gb|ADA65536.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. lactis KF147]
gi|300071546|gb|ADJ60946.1| Cysteine desulfurase activator complex, subunit SufB [Lactococcus
lactis subsp. cremoris NZ9000]
gi|326407276|gb|ADZ64347.1| Fe-S cluster assembly protein SufB [Lactococcus lactis subsp.
lactis CV56]
gi|354694131|gb|EHE93822.1| hypothetical protein LLCRE1631_00957 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|358748838|gb|AEU39817.1| Iron-sulfur cluster assembly protein SufB [Lactococcus lactis
subsp. cremoris A76]
gi|374673877|dbj|BAL51768.1| hypothetical protein lilo_1771 [Lactococcus lactis subsp. lactis
IO-1]
Length = 470
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G K E PI Y + + + G + R +++VEEG + +E
Sbjct: 191 VYVPKGVKCEIPIQAYFRINNEKSGQFE---------RTLIIVEEGASIQYVEGCTAPTY 241
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +V+E+ + +GG +R+S +QN S N ++
Sbjct: 242 SASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNL 276
>gi|365881110|ref|ZP_09420440.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
gi|365290774|emb|CCD92971.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. ORS 375]
Length = 440
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 22/245 (8%)
Query: 58 DSLPSSSS-------SLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQI 110
DS P++SS LP + ++R + T P R+ E +++TD + +
Sbjct: 9 DSGPAASSVFAAAQGRLPGTGKVAEIRREAFAAFERTGLPHRRIEEWKYTDLRALARELL 68
Query: 111 QPITRPSSSLDVSTDAQF--------PSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSD 162
P ++ A LVL+DG + +L+ LP GV V +L V D
Sbjct: 69 PLAGAPDAAALAKAKAAIASAAIDGATKLVLVDGVVAAELSDLAALPAGVTVRTLRAVLD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
+ + D S+N A D V+ V G ++ +P++L +++ SK
Sbjct: 129 EASNDSRGDLLLTKASDPMLSLNAALATDGVVVTVADGTQLSSPLHLIHVATA-----SK 183
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
S R V + +G ++E + +G Y AN + +G ++ H L +
Sbjct: 184 AARYS--RSHVRIGQGARATLVETSIVADGAAAYQANDAAVIWVGDQAQLSHIRLMRDAA 241
Query: 283 NAAHI 287
+A ++
Sbjct: 242 DALNV 246
>gi|340621063|ref|YP_004739514.1| hypothetical protein Ccan_02850 [Capnocytophaga canimorsus Cc5]
gi|339901328|gb|AEK22407.1| UPF0051 protein [Capnocytophaga canimorsus Cc5]
Length = 432
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 37/241 (15%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTD---------------TSMIKSSQIQPITRPS 117
L R+ S +P+RKDE +++T + + + QIQP +
Sbjct: 21 LYNTRNQSIAYFREKGFPTRKDEAWKYTSLKDLLNHNFEIVQSVKNQVSAEQIQPFLLET 80
Query: 118 SSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYV---GSLLGVSDGIMKRVSDFISE 174
S V V +DGF + +++ D + + +L G E
Sbjct: 81 DSYKV---------VFVDGFFNDELSDIN--SDEILISPLSEILKSDKGKEFSEKHLNQE 129
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVV 233
+ D+F ++N + IYV +E PI L +++ + ++ + PR ++
Sbjct: 130 TRKDDVFTALNTAFIQEGICIYVAKNKVIEKPIQLLFVT------SNTEISLCLQPRNII 183
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
V E +V IIE NSV E+ + + + +QN + A+ I T +
Sbjct: 184 EVGENAQVKIIETHQSLSSQPM-LTNSVTEIFVEDNALLDYYKVQNDNQQASLIDNTYIS 242
Query: 294 Q 294
Q
Sbjct: 243 Q 243
>gi|302669426|ref|YP_003829386.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
gi|302393899|gb|ADL32804.1| FeS assembly protein SufB [Butyrivibrio proteoclasticus B316]
Length = 469
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KVE P+ Y + + G + +++V+EG ++ IE +
Sbjct: 192 VYVPKGVKVEIPLQSYFRLNAAGAGQFE---------HTLIIVDEGADLHFIEGCSAPKY 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
N +E+ +GKG ++R+S ++N S N
Sbjct: 243 NVANLHAGCVELFVGKGARLRYSTIENWSKN 273
>gi|448241978|ref|YP_007406031.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|445212342|gb|AGE18012.1| FeS cluster assembly protein of SufBCD complex [Serratia marcescens
WW4]
gi|453065549|gb|EMF06510.1| FeS assembly protein SufD [Serratia marcescens VGH107]
Length = 428
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSS-----SLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T S+++ ++P P S +L + DA LV ID
Sbjct: 36 QQALRLGWPTRKHENWKYTPLESLLEQQFLEPQPAPVSAEQLDALALGIDA--CRLVFID 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G ++AL+ +L D + + G + + + ++F + A + +I
Sbjct: 94 GRY-SAALSDGDLGDYQFELTAYGTPQALPEPIQP--------EIFLHLTESLAQETSLI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
+PAG P+YL L + G + ++ + R + + G E +IE +V G
Sbjct: 145 RLPAGKIPARPLYL--LHISSGRGAAGEVNTVHHRHHLEIGRGAEAEVIEHYVSL-GEAA 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++ + L + + H L +S + H
Sbjct: 202 HFTGARLTANVADNAGLLHCKLAFESQPSYHF 233
>gi|405382874|ref|ZP_11036650.1| FeS assembly protein SufD [Rhizobium sp. CF142]
gi|397320635|gb|EJJ25067.1| FeS assembly protein SufD [Rhizobium sp. CF142]
Length = 424
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 21/235 (8%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L ++ LP + LRD L P+R+ E + +TD +++++ +Q
Sbjct: 15 ALIEAFNEKIGELPGNGAVTALRDRLLDDLKREGLPTRRVEAWHYTDLKNLLRNIPVQAG 74
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFIS 173
S +L+ D P L +I G + A + +L VY L +DG D +
Sbjct: 75 DAGSEALEPLVDGS-PVLAVIQGKPVHKA-SAGDLAVAVYSEKL---TDGSAAANLDALG 129
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
D ING D V+ VP G + E P+ ++++ GG++ + +LP+S
Sbjct: 130 R---DDAVGRINGSFVKDGYVVDVPDGTEFEEPLEIQFVHA-GGDIHT-RLPVSF----- 179
Query: 234 LVEEGGEV-GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G V G++ E ++ + V ++ +G+G ++ LQ Q H+
Sbjct: 180 ----GANVKGVVIERHQSVTDNAALVSHVSDITVGQGTELTWIILQQQGAEDTHL 230
>gi|189501697|ref|YP_001957414.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497138|gb|ACE05685.1| hypothetical protein Aasi_0242 [Candidatus Amoebophilus asiaticus
5a2]
Length = 439
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 28/248 (11%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ---- 111
L+++ SSL QK++ + +T P K E ++ T + + S +
Sbjct: 10 LQEAFSRHISSLSTTHDWQKVQQEAYRTFQKLGLPHAKTEAYKNTPITSVLSEKFNLSDV 69
Query: 112 PIT--RPSSSLDVSTDAQFPS--LVLIDGFI--QNSALNLSNLPDGVYV--GSLLGVSDG 163
PI PS ++ F S +VL++G I + + +NL + VY + D
Sbjct: 70 PIALDEPSEEIEALLQQSFDSYPIVLVNGMISKRYTPINLLHPSFQVYTFDEAYTQHPDL 129
Query: 164 IMKRVSDFISEFQCG----DLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNV 219
+MK QC D+F IN +IY+P +N + K L +
Sbjct: 130 LMKHFD------QCASDKLDIFTFINTALFKTGIMIYIP-----DNVVLDKTLHIYNITD 178
Query: 220 DSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
+ + IS PR++++ + ++ II + N+ + N+V ++++G ++ LQ
Sbjct: 179 AATQKAISYPRLLIVTGKNSQLSIINSWHTLGENEGF-TNAVTDIIVGPYTQLDCYTLQT 237
Query: 280 QSLNAAHI 287
Q NA I
Sbjct: 238 QLGNACQI 245
>gi|51893176|ref|YP_075867.1| hypothetical protein STH2038 [Symbiobacterium thermophilum IAM
14863]
gi|51856865|dbj|BAD41023.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 466
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 187 IYVPPGVTVEIPL-QAYFRINTENMGQFE------RTLIIVDEGANVHYVEGCTAPIYST 239
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+V+E+++ KGG+ R++ +QN S N ++
Sbjct: 240 DSLHAAVVEIIVKKGGRCRYTTIQNWSTNVYNL 272
>gi|409437499|ref|ZP_11264613.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
gi|408750927|emb|CCM75771.1| putative iron-sulfur cluster assembly protein [Rhizobium
mesoamericanum STM3625]
Length = 424
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 51/268 (19%)
Query: 33 VSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSR 92
+++QTT Q T ++ +I+ + LP S + +RD L P+R
Sbjct: 1 MNMQTTSRQ-TAAEAALIEAFNNQIGELPGDGSVIA-------IRDRLLDDLKRAGLPTR 52
Query: 93 KDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALN-LSNLPDG 151
+ E + +TD + ++ I P+ + D ++A+ P L++ Q+S L+ + +PD
Sbjct: 53 RIEAWHYTDLKTL----LRAI--PAQAGDAGSEARDP---LVE---QSSVLSVIQGVPD- 99
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCG------------DLFWSINGMGAPDLGVIYVPA 199
L DG+ +SD+ + G D ING D VI VPA
Sbjct: 100 -----LRASVDGL--DISDYAALLSNGTAATSLGALGSDDAIGRINGSFVRDGYVIDVPA 152
Query: 200 GCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWAN 259
G +E P+ +++ V G +LP++ V + +IE + +D +
Sbjct: 153 GADLEAPVEIQF--VHAGGQTHTRLPVNFGANV-------KATVIERHLAVT-SDAALVS 202
Query: 260 SVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V ++ +G+G ++ +Q Q + H+
Sbjct: 203 HVSDITVGEGSELTWIIIQQQGADDTHL 230
>gi|365900638|ref|ZP_09438503.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
gi|365418611|emb|CCE11045.1| sufD, needed for fhuF Fe-S center production/stability
[Bradyrhizobium sp. STM 3843]
Length = 441
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD--TSMIKSSQIQPI 113
L D ++ LP + +R ++ + P R+ E +++TD M ++ ++ +
Sbjct: 14 LADLYQTARKFLPGGDEVSAVRSAAFDRFNAVGLPHRRIEAWKYTDLRGQMKEAKRLASL 73
Query: 114 ------TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLG--VSDG-- 163
+ + D+ A F L+++DG +L+NL G+ + ++ SD
Sbjct: 74 PDDAAKAKAREAQDLFAGAGFRRLMIVDGAFVTELSDLANLEPGLTIHAMADALASDQPL 133
Query: 164 IMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKK 223
+ +R+ + E D +N A + VI V G + PI++ +++ N +
Sbjct: 134 LSQRLGAVVPE---DDPALVLNTALAGNGVVICVAPGTALARPIHVAFVTT---NWVATS 187
Query: 224 LPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ R +V + G IIE G + +D Y N+ +++V+G ++ H + +
Sbjct: 188 M---FTRSLVNIGGGASATIIETHQGPDRSD-YQVNTAMQLVVGDEARIDHIKVTREGDG 243
Query: 284 AAHI 287
A H+
Sbjct: 244 ALHV 247
>gi|410582771|ref|ZP_11319877.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
gi|410505591|gb|EKP95100.1| Iron-regulated ABC transporter membrane component SufB
[Thermaerobacter subterraneus DSM 13965]
Length = 466
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 155 GSLLGVSDGIMKRVSDFISEF------QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIY 208
G + +D +K D + E+ + F ++N IYVP G +V+ P+
Sbjct: 141 GVIFCDTDTAVKEYPDLVREYFGTVVPAEDNKFAALNTAVWSGGSFIYVPPGVRVDIPL- 199
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGK 268
Y + N+ + R +++V+EG V +E + ++V+E+++ K
Sbjct: 200 QAYFRINAQNMGQFE------RTLIIVDEGAFVHYVEGCTAPIYSTDSLHSAVVEIIVKK 253
Query: 269 GGKVRHSYLQNQSLNAAHI 287
GG+ R++ +QN S N ++
Sbjct: 254 GGRCRYTTIQNWSHNVYNL 272
>gi|116512657|ref|YP_811564.1| hypothetical protein LACR_1969 [Lactococcus lactis subsp. cremoris
SK11]
gi|116108311|gb|ABJ73451.1| Iron-regulated ABC transporter membrane component SufB [Lactococcus
lactis subsp. cremoris SK11]
Length = 470
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G K E PI Y + + + G + R +++VEEG + +E
Sbjct: 191 VYVPKGVKCEIPIQAYFRINNEKSGQFE---------RTLIIVEEGASIQYVEGCTAPTY 241
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +V+E+ + +GG +R+S +QN S N ++
Sbjct: 242 SASSLHAAVVEIFVEEGGYMRYSTIQNWSDNVYNL 276
>gi|239828239|ref|YP_002950863.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
gi|239808532|gb|ACS25597.1| FeS assembly protein SufB [Geobacillus sp. WCH70]
Length = 465
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
+G + +D +K D E+ + F ++N IYVP G KVE P+
Sbjct: 139 LGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPL 198
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
Y + N+ + R +++V+EG V +E ++V+E+++
Sbjct: 199 -QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPIYTTASLHSAVVEIIVK 251
Query: 268 KGGKVRHSYLQNQSLN 283
K R++ +QN S N
Sbjct: 252 KDAYCRYTTIQNWSNN 267
>gi|169350358|ref|ZP_02867296.1| hypothetical protein CLOSPI_01125 [Clostridium spiroforme DSM 1552]
gi|169293141|gb|EDS75274.1| FeS assembly protein SufB [Clostridium spiroforme DSM 1552]
Length = 468
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++NG IYVP G K+E P+ + ++S+++ R +++V++G E
Sbjct: 174 FSALNGAVWSGGSFIYVPPGVKLEKPLQSYF------RINSEQMA-QFERTLIIVDKGAE 226
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +E + V+E+V+ +G K R++ +QN S N
Sbjct: 227 IHYVEGCTAPNYSKDSLHAGVVEIVVKEGAKCRYTTIQNWSDN 269
>gi|410457118|ref|ZP_11310955.1| ABC transporter ATP-binding protein [Bacillus bataviensis LMG
21833]
gi|409926457|gb|EKN63628.1| ABC transporter ATP-binding protein [Bacillus bataviensis LMG
21833]
Length = 465
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPPGIKVDTPL-QAYFRINSENMGQFE------RTLIIVDEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|456355250|dbj|BAM89695.1| SufD, needed for fhuF Fe-S center production/stability [Agromonas
oligotrophica S58]
Length = 440
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
LVLIDG + +LS LP GV V +L V D + + D S+N A
Sbjct: 97 LVLIDGVVAADLSDLSALPAGVTVRTLRAVLDDQSNDARGDLLLTKASDPMLSLNAALAT 156
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
D VI V G ++ P+ L +++ S + S+ R V +G ++E +
Sbjct: 157 DGVVITVADGAQLSAPLQLIHVATAA---KSARYSRSHLR----VGQGARATLVENSIAV 209
Query: 251 EGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+G Y AN + +G + H L + +A ++
Sbjct: 210 DGAAAYQANDAAVISVGDDAALSHVRLMRDATDALNV 246
>gi|451343425|ref|ZP_21912497.1| FeS assembly protein SufB [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337788|gb|EMD16944.1| FeS assembly protein SufB [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 467
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++NG IYVP G K++ P+ + G + R +++V+EG +
Sbjct: 173 FSALNGAVWSGGSFIYVPPGVKLDKPLQAYFRINSAGMAQFE-------RTLIIVDEGAD 225
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +E + V+E+++GK R++ +QN S N ++
Sbjct: 226 IHYVEGCTAPSYSQDSLHAGVVEIIVGKNAHCRYTTIQNWSRNVLNL 272
>gi|449133607|ref|ZP_21769157.1| FeS assembly protein SufD [Rhodopirellula europaea 6C]
gi|448887772|gb|EMB18130.1| FeS assembly protein SufD [Rhodopirellula europaea 6C]
Length = 436
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 22/194 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--SSSLD 121
+S +P L LR S + WP+R+ E + TD I++ QI+ P +++ D
Sbjct: 19 ASRKDEPQWLTDLRRESFSHADAMDWPARRSEEWIRTD---IRTFQIKKFAPPVEATAGD 75
Query: 122 VSTDAQF-----PSLVL--IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V Q P VL D + + +L+ GV GSL + +V F+
Sbjct: 76 VPAVHQLRDGVEPGGVLETYDSQVISESLDEELAAKGVIFGSLERLCREQPDKVRPFLYT 135
Query: 175 FQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F +++ +YVP G +E PIYL +GG +
Sbjct: 136 VVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGT--------DTAHTL 187
Query: 233 VLVEEGGEVGIIEE 246
+++E+G E ++ E
Sbjct: 188 IVLEDGAEATVLHE 201
>gi|320334855|ref|YP_004171566.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
gi|319756144|gb|ADV67901.1| FeS assembly protein SufD [Deinococcus maricopensis DSM 21211]
Length = 451
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N + +YVP G +VE P+ + E G + R +V+ EE +
Sbjct: 160 FSALNAALWTNGAFVYVPRGVEVELPLGSFRVMSEAGT-------YTATRTLVVAEENAQ 212
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
V I+E E Y A +E+V+ G +VR+ +QN HI+
Sbjct: 213 VTFIDEQDSDELPGTY-AFGAVELVVKAGARVRYVSVQNWGKGVTHIQ 259
>gi|417104050|ref|ZP_11961280.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
gi|327191055|gb|EGE58108.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CNPAF512]
Length = 424
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 41/233 (17%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR--PSSSLDVST 124
LP + LRD L P+R+ E + +TD + + R PS + D +
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTD--------FKNLLRGLPSQAGDAGS 78
Query: 125 D------AQFPSLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
D A L +I G A L +S + + GS G D +
Sbjct: 79 DPLEPLVAGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLDAL---------- 128
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D ING D V+ VP +E+P+ +++ + G +LP+S
Sbjct: 129 -GGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQF--IHAGGQTHTRLPVS------- 178
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G + +IE G D + + + ++ +GKG ++ LQ Q + AH+
Sbjct: 179 FGAGVQATVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGADDAHL 230
>gi|227504375|ref|ZP_03934424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
gi|227199023|gb|EEI79071.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Corynebacterium striatum ATCC 6940]
Length = 481
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++VEE V IE N
Sbjct: 202 VYVPKGVHVDIPL-QAYFRINTENMGQFE------RTLIIVEEDAYVHYIEGCTAPIYNS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V+E+V+ KGG+ R++ +QN S N ++
Sbjct: 255 DSLHTGVIEIVVKKGGRCRYTTIQNWSTNVYNL 287
>gi|386395547|ref|ZP_10080325.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
gi|385736173|gb|EIG56369.1| FeS assembly protein SufD [Bradyrhizobium sp. WSM1253]
Length = 440
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 15/241 (6%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI--------K 106
++ D S++ LP + +R + +T P R+ E +++TD +
Sbjct: 13 AVSDLFASAAGRLPGSPSVIAVRREAFETYERLGLPHRRIEEWKYTDLRALVGEVLPLAA 72
Query: 107 SSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK 166
+ + R + ++ A LVL+DG +L L V V +L V +
Sbjct: 73 APDAAALKRAADAVKAHAIAGARKLVLVDGVFAADLSDLKALGSEVSVKTLREVLENKAN 132
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
+ + + D S+N A D VI V G + P+ L +++ +
Sbjct: 133 PAAADLLQTISSDAVISLNAAMATDGVVISVADGAQPSAPVQLIHVA-------TASSAS 185
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
S R + + +G IIE FV Y N + + +G V H L + S +A +
Sbjct: 186 SFTRSHLRIGKGARATIIESFVAAGKTSAYQVNDAVILWVGDNADVAHIRLMDDSPDAVN 245
Query: 287 I 287
I
Sbjct: 246 I 246
>gi|269123898|ref|YP_003306475.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
gi|268315224|gb|ACZ01598.1| FeS assembly protein SufB [Streptobacillus moniliformis DSM 12112]
Length = 471
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 27/113 (23%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F +++G +YVP G K+E P+ Y + + E G + +++VEEG
Sbjct: 177 FAALHGAVWSGGSFVYVPKGVKIEKPLQSYFRLNASESGQFE---------HTLIIVEEG 227
Query: 239 GEVGIIEEFVGKEGNDC----YWANSV----LEVVIGKGGKVRHSYLQNQSLN 283
E+ IE C Y+ N++ +E+ + K K+R+S ++N S N
Sbjct: 228 AELHFIE--------GCSAPKYYRNALHAGAVELFVAKNAKLRYSTIENWSKN 272
>gi|238791666|ref|ZP_04635303.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
gi|238728770|gb|EEQ20287.1| hypothetical protein yinte0001_13790 [Yersinia intermedia ATCC
29909]
Length = 428
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 76 LRDSSSQTLLSTPW--------PSRKDEPFRFTDTSMIKSSQI------QPITRPSSSLD 121
LR S T S W PS K E +++T + + + Q L
Sbjct: 25 LRQSGHSTQASAHWQQVLQLGFPSFKHEDWKYTPLERLLAHRFSFASPAQVTASQRDELS 84
Query: 122 VSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLF 181
+ DA LV IDG A LS++ G Y L +S + F Q ++F
Sbjct: 85 LVQDAH--RLVFIDG---RYAPELSDIECGPY--QLTNLSGN-----TQFPPAIQ-SEVF 131
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
+ A + I +P G E P+YL L + GN DS + S+ R +++E +
Sbjct: 132 LHLTESLAQESLHIRLPVGKHSEKPLYL--LHISSGN-DSDVVNTSHYRHHLVIEANAQA 188
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+IE FV ++ + L + +G ++ H L
Sbjct: 189 EVIEHFVSL-NQQPHFTGARLTIAVGDNAELHHCKL 223
>gi|336417373|ref|ZP_08597697.1| FeS assembly protein SufD [Bacteroides ovatus 3_8_47FAA]
gi|335936119|gb|EGM98059.1| FeS assembly protein SufD [Bacteroides ovatus 3_8_47FAA]
Length = 447
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 89 WPSRKDEPFRFTDTSMI----KSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDGFIQ 139
+P+RK E +++TD S + + P + +V P++ +++
Sbjct: 42 FPTRKMEKYKYTDVSKYFEPDYGLNLNRLAIPVNPYEVFK-CDVPNMSTALYFMVNDAFY 100
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
N AL NLP+GV GSL V+ + V + + D + N D V YV
Sbjct: 101 NRALPKVNLPEGVIFGSLKEVAGQHPELVKKYYGQLADTSKDGVTAFNTAFVQDGVVFYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE PI L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVVVEKPIQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGK 268
+ A V+EV G+
Sbjct: 212 FLATQVIEVFAGE 224
>gi|325953986|ref|YP_004237646.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
gi|323436604|gb|ADX67068.1| FeS assembly protein SufD [Weeksella virosa DSM 16922]
Length = 439
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 22/234 (9%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVS-------TD 125
+++LR + + +P RKDE +++T+ + I + L+ D
Sbjct: 25 IEELRQHAIEVFKEKGFPKRKDEEWKYTNIAPILKVDYKLFPETEVGLEYKDIKKYLIND 84
Query: 126 AQFPSLVLIDG----FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDL- 180
+V I+G F+ N+ + D + S L S + ++ + D
Sbjct: 85 IDTYLIVFINGKYSSFLSNTT---HDEADICVLSSALNNSVH-HSVIENYFGKIAAKDES 140
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++N A D IYVP + PI + Y S + + PR ++++ + +
Sbjct: 141 FTALNTAFARDGAFIYVPNNTILSKPIQVVYFS-----TGVLQEVMYQPRNLIVIGDNAQ 195
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
IIE +G N+V EV +GK +V+ QN S N + I + Q
Sbjct: 196 AQIIECHQTLDG-VANLTNAVTEVNVGKNAEVQIHKFQNDSDNVSLIDNVYINQ 248
>gi|385839752|ref|YP_005877499.1| ABC transporter-associated protein [Lactobacillus salivarius CECT
5713]
gi|300215443|gb|ADJ79856.1| ABC transporter-associated protein [Lactobacillus salivarius CECT
5713]
Length = 470
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE PI Y + GN S + R +++V+EG V +E +
Sbjct: 191 IYVPKGVKVETPI-QSYFRINAGN--SGQF----ERTLIIVDEGASVNYVEGCTAPNYSQ 243
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+V+EV + + R++ +QN S N ++ R L
Sbjct: 244 DSLHAAVVEVNVLRDAYCRYTTIQNWSNNVYSLETKRARAL 284
>gi|226355169|ref|YP_002784909.1| FeS assembly protein SufD [Deinococcus deserti VCD115]
gi|226317159|gb|ACO45155.1| putative FeS assembly protein SufD [Deinococcus deserti VCD115]
Length = 450
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G +VE P+ + E G + R +V+ EE +V I+E ++ +
Sbjct: 173 VYVPRGVEVELPLGSFRVMSEAGT-------YTATRTLVVAEENAQVTFIDEQDSEDLPN 225
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
Y +V E+V+ +G ++R+ +QN HI+
Sbjct: 226 TYAIGAV-ELVVKQGARLRYVSIQNWGKGVTHIQ 258
>gi|94984580|ref|YP_603944.1| FeS assembly protein SufB [Deinococcus geothermalis DSM 11300]
gi|94554861|gb|ABF44775.1| Iron-regulated ABC transporter membrane component SufB [Deinococcus
geothermalis DSM 11300]
Length = 467
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 157 LLGVSDGIMKRVSDFISEFQC-----GDLFWSINGMGAPDLGVIYVPAGCKVENPI--YL 209
L + DG+ + F F + F +IN +YVP G KV+ P+ Y
Sbjct: 145 FLSIEDGLKQYPDLFREHFATVIPPEDNKFAAINSAVWSGGSFVYVPKGVKVDIPLQTYF 204
Query: 210 KYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKG 269
+ + G + R +++V+EG + IE + + V+E+++ +G
Sbjct: 205 RINAESSGQFE---------RTLIIVDEGAQAHYIEGCTAPTYASDSFHSGVIEIIVKEG 255
Query: 270 GKVRHSYLQNQSLNAAHI 287
+ R+S +QN S N ++
Sbjct: 256 ARFRYSTIQNWSHNVYNL 273
>gi|32476186|ref|NP_869180.1| iron-regulated ABC transporter [Rhodopirellula baltica SH 1]
gi|32446730|emb|CAD76566.1| conserved hypothetical protein-putative iron-regulated ABC
transporter [Rhodopirellula baltica SH 1]
Length = 486
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 22/194 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--SSSLD 121
+S +P L LR S + WP+R+ E + TD I++ QI P +++ D
Sbjct: 69 ASRKDEPQWLTDLRRESFSHADAMDWPARRSEEWIRTD---IRTFQINKFAPPVEATAGD 125
Query: 122 VSTDAQF-----PSLVL--IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V Q P VL D + + +L+ GV GSL + +V F+
Sbjct: 126 VPAVHQLRDGVEPGGVLETYDSQVVSESLDEELAAKGVIFGSLERLCREQPDKVRPFLYT 185
Query: 175 FQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F +++ +YVP G +E PIYL +GG +
Sbjct: 186 VVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGT--------DTAHTL 237
Query: 233 VLVEEGGEVGIIEE 246
+++E+G E ++ E
Sbjct: 238 IVLEDGAEATVLHE 251
>gi|138896579|ref|YP_001127032.1| hypothetical protein GTNG_2942 [Geobacillus thermodenitrificans
NG80-2]
gi|196249281|ref|ZP_03147979.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
gi|134268092|gb|ABO68287.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
gi|196211038|gb|EDY05799.1| FeS assembly protein SufB [Geobacillus sp. G11MC16]
Length = 465
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPIYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGAYCRYTTIQNWANN 267
>gi|15644121|ref|NP_229170.1| hypothetical protein TM1369 [Thermotoga maritima MSB8]
gi|418045426|ref|ZP_12683521.1| FeS assembly protein SufB [Thermotoga maritima MSB8]
gi|4981931|gb|AAD36440.1|AE001791_2 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676311|gb|EHA59464.1| FeS assembly protein SufB [Thermotoga maritima MSB8]
Length = 464
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP------RVVVLVEEGGEVGIIEEFV 248
+YVPAG K+ P+ +L +SNP +++ EEG EV IE
Sbjct: 185 LYVPAGVKIPMPLQAYFL-------------MSNPGMGQFEHTIIVAEEGSEVTFIEGCS 231
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N ++E+ + KG KV++ +QN S N ++
Sbjct: 232 APRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYNL 270
>gi|170289249|ref|YP_001739487.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
gi|170176752|gb|ACB09804.1| FeS assembly protein SufB [Thermotoga sp. RQ2]
Length = 464
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP------RVVVLVEEGGEVGIIEEFV 248
+YVPAG K+ P+ +L +SNP +++ EEG EV IE
Sbjct: 185 LYVPAGVKIPMPLQAYFL-------------MSNPGMGQFEHTIIVAEEGSEVTFIEGCS 231
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N ++E+ + KG KV++ +QN S N ++
Sbjct: 232 APRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYNL 270
>gi|333926979|ref|YP_004500558.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333931933|ref|YP_004505511.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|386328802|ref|YP_006024972.1| FeS assembly protein SufD [Serratia sp. AS13]
gi|333473540|gb|AEF45250.1| FeS assembly protein SufD [Serratia plymuthica AS9]
gi|333491039|gb|AEF50201.1| FeS assembly protein SufD [Serratia sp. AS12]
gi|333961135|gb|AEG27908.1| FeS assembly protein SufD [Serratia sp. AS13]
Length = 428
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 20/212 (9%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQ-IQPITRP-----SSSLDVSTDAQFPSLVLID 135
Q L WP+RK E +++T + Q ++P P +L ++ DA LV +D
Sbjct: 36 QQALRLGWPTRKHENWKYTPLEGLLEQQFLEPQAEPIAAAQRDALALNLDAY--RLVFVD 93
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVI 195
G N+AL+ S+L + + + G + + + ++F + A + +I
Sbjct: 94 GRF-NAALSDSDLGEYQFDVTPYGTPQALPEPIQP--------EIFLHLTESLAQETSMI 144
Query: 196 YVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
V AG P+YL L + G ++ + R + V +IE +V
Sbjct: 145 RVAAGKIATRPLYL--LHISSGRGSEGEVNTVHHRHHLDVGRNARAEVIEHYVSL-NEAA 201
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++ + L +G ++RH L +S + H
Sbjct: 202 HFTGTRLTASVGDNAELRHCKLAFESQASYHF 233
>gi|281412851|ref|YP_003346930.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
gi|281373954|gb|ADA67516.1| FeS assembly protein SufB [Thermotoga naphthophila RKU-10]
Length = 464
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP------RVVVLVEEGGEVGIIEEFV 248
+YVPAG K+ P+ +L +SNP +++ EEG EV IE
Sbjct: 185 LYVPAGVKIPMPLQAYFL-------------MSNPGMGQFEHTIIVAEEGSEVTFIEGCS 231
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N ++E+ + KG KV++ +QN S N ++
Sbjct: 232 APRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYNL 270
>gi|91976930|ref|YP_569589.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
gi|91683386|gb|ABE39688.1| FeS assembly protein SufD [Rhodopseudomonas palustris BisB5]
Length = 437
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
LVL+DG + + +LS L G+ + SL D D + G+ ++N
Sbjct: 97 LVLVDGALAVALSDLSALEAGLSIRSLREALDA----GDDRLLSLDTGNPMTALNTALMT 152
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE--VGIIEEFV 248
D VI + G K+ P+++ +++ G S S LV G E ++E FV
Sbjct: 153 DGVVIDIADGAKLAKPLHIVHIA--SGGAPSAMFTRS------LVSLGKESAATVVESFV 204
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
EG Y + + +G ++ H L S +A +I VR
Sbjct: 205 AGEGAGVYQVHDTAVMTVGDRARLDHVRLIEDSRDAFNIASAEVR 249
>gi|448239250|ref|YP_007403308.1| FeS cluster assembly protein [Geobacillus sp. GHH01]
gi|445208092|gb|AGE23557.1| FeS cluster assembly protein [Geobacillus sp. GHH01]
Length = 465
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
+G + +D +K D E+ + F ++N IYVP G KV+ P+
Sbjct: 139 LGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPL 198
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
Y + N+ + R +++V+EG V +E ++V+E+++
Sbjct: 199 -QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPIYTTNSLHSAVVEIIVK 251
Query: 268 KGGKVRHSYLQNQSLN 283
KG R++ +QN + N
Sbjct: 252 KGAYCRYTTIQNWANN 267
>gi|148270543|ref|YP_001245003.1| FeS assembly protein SufB [Thermotoga petrophila RKU-1]
gi|147736087|gb|ABQ47427.1| Iron-regulated ABC transporter membrane component SufB [Thermotoga
petrophila RKU-1]
Length = 464
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP------RVVVLVEEGGEVGIIEEFV 248
+YVPAG K+ P+ +L +SNP +++ EEG EV IE
Sbjct: 185 LYVPAGVKIPMPLQAYFL-------------MSNPGMGQFEHTIIVAEEGSEVTFIEGCS 231
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N ++E+ + KG KV++ +QN S N ++
Sbjct: 232 APRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYNL 270
>gi|383190670|ref|YP_005200798.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371588928|gb|AEX52658.1| FeS assembly protein SufD [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 433
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP----SLVLIDGF 137
Q +L +P K E +++T S + +Q + + +++ P LV +DG
Sbjct: 42 QQVLRLGFPHAKLEDWKYTPVSSLLGNQFFAPQQQALTVEKIKSLALPLDCYRLVFVDGR 101
Query: 138 IQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYV 197
S LS+ G + + ++ + + D I ++F + A D + +
Sbjct: 102 FDAS---LSDSDTGAF--EIEKLNAAAQQTLPDPIQ----SEVFLHLTESLAQDSFFVRL 152
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYW 257
PAG + E P+YL +LS G S+++ + R + +E G +IE ++ + ++
Sbjct: 153 PAGKQAEKPLYLLHLS--SGREQSREMNTVHHRYHLAIENGANAEVIEHYLSL-NDQGHF 209
Query: 258 ANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ + V +G H L +S + H
Sbjct: 210 TGARMTVNVGDNADFTHYKLAFESQASFHF 239
>gi|421612433|ref|ZP_16053540.1| SUF system FeS cluster assembly, SufD [Rhodopirellula baltica SH28]
gi|408496729|gb|EKK01281.1| SUF system FeS cluster assembly, SufD [Rhodopirellula baltica SH28]
Length = 486
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 22/194 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--SSSLD 121
+S +P L LR S + WP+R+ E + TD I++ QI P +++ D
Sbjct: 69 ASRKDEPQWLTDLRRESFSHADAMDWPARRSEEWIRTD---IRTFQINKFAPPVEATAGD 125
Query: 122 VSTDAQF-----PSLVL--IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V Q P VL D + + +L+ GV GSL + +V F+
Sbjct: 126 VPAVHQLRDGVEPGGVLETYDSQVISESLDEELAAKGVIFGSLERLCREQPDKVRPFLYT 185
Query: 175 FQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F +++ +YVP G +E PIYL +GG +
Sbjct: 186 VVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGT--------DTAHTL 237
Query: 233 VLVEEGGEVGIIEE 246
+++E+G E ++ E
Sbjct: 238 IVLEDGAEATVLHE 251
>gi|56421526|ref|YP_148844.1| hypothetical protein GK2991 [Geobacillus kaustophilus HTA426]
gi|261420429|ref|YP_003254111.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297528870|ref|YP_003670145.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|319768096|ref|YP_004133597.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
gi|375010118|ref|YP_004983751.1| FeS cluster assembly protein sufB [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56381368|dbj|BAD77276.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|261376886|gb|ACX79629.1| FeS assembly protein SufB [Geobacillus sp. Y412MC61]
gi|297252122|gb|ADI25568.1| FeS assembly protein SufB [Geobacillus sp. C56-T3]
gi|317112962|gb|ADU95454.1| FeS assembly protein SufB [Geobacillus sp. Y412MC52]
gi|359288967|gb|AEV20651.1| FeS cluster assembly protein sufB [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 465
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
+G + +D +K D E+ + F ++N IYVP G KV+ P+
Sbjct: 139 LGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPL 198
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
Y + N+ + R +++V+EG V +E ++V+E+++
Sbjct: 199 -QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPIYTTNSLHSAVVEIIVK 251
Query: 268 KGGKVRHSYLQNQSLN 283
KG R++ +QN + N
Sbjct: 252 KGAYCRYTTIQNWANN 267
>gi|313147911|ref|ZP_07810104.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
gi|313136678|gb|EFR54038.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
Length = 447
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVST 124
P+ R ++ +P+RK E +++TD S + +++ P
Sbjct: 25 PMNAPRAAAFADFERQGFPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDV 84
Query: 125 DAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ--CGDL 180
SL + D F N AL S LP+GV G L +++ + V + + D
Sbjct: 85 PNMSTSLFFVVNDAFY-NQALPKSGLPEGVIFGGLREMAEQHPELVKKYYGKLADTSKDA 143
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
+ N D ++YVP V+ PI L +++ +V+ + N RV++++EEG +
Sbjct: 144 VTAFNTAFTQDGVLMYVPKNVVVDKPIQL--VNILRADVNF----MVNRRVLIILEEGAQ 197
Query: 241 VGII 244
++
Sbjct: 198 ARLL 201
>gi|403253687|ref|ZP_10919988.1| hypothetical protein EMP_07947 [Thermotoga sp. EMP]
gi|402811221|gb|EJX25709.1| hypothetical protein EMP_07947 [Thermotoga sp. EMP]
Length = 464
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNP------RVVVLVEEGGEVGIIEEFV 248
+YVPAG K+ P+ +L +SNP +++ EEG EV IE
Sbjct: 185 LYVPAGVKIPMPLQAYFL-------------MSNPGMGQFEHTIIVAEEGSEVTFIEGCS 231
Query: 249 GKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
N ++E+ + KG KV++ +QN S N ++
Sbjct: 232 APRYNIINLHAGMVEIYVKKGAKVKYLTIQNWSKNTYNL 270
>gi|423281185|ref|ZP_17260096.1| FeS assembly protein SufD [Bacteroides fragilis HMW 610]
gi|424665878|ref|ZP_18102914.1| FeS assembly protein SufD [Bacteroides fragilis HMW 616]
gi|404574131|gb|EKA78882.1| FeS assembly protein SufD [Bacteroides fragilis HMW 616]
gi|404583349|gb|EKA88030.1| FeS assembly protein SufD [Bacteroides fragilis HMW 610]
Length = 451
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 72 PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVST 124
P+ R ++ +P+RK E +++TD S + +++ P
Sbjct: 29 PMNAPRAAAFADFERQGFPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDV 88
Query: 125 DAQFPSLVLI--DGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDL 180
SL + D F N AL S LP+GV G L +++ + V + + D
Sbjct: 89 PNMSTSLFFVVNDAFY-NQALPKSGLPEGVIFGGLREMAEQHPELVKKYYGKLADTSKDA 147
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
+ N D ++YVP V+ PI L +++ +V+ + N RV++++EEG +
Sbjct: 148 VTAFNTAFTQDGVLMYVPKNVVVDKPIQL--VNILRADVNF----MVNRRVLIILEEGAQ 201
Query: 241 VGII 244
++
Sbjct: 202 ARLL 205
>gi|171910582|ref|ZP_02926052.1| FeS assembly protein SufB [Verrucomicrobium spinosum DSM 4136]
Length = 471
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IY+P G KV++P+ Y + S + G + R +++ +EG EV +E +
Sbjct: 192 IYIPPGVKVKHPLQAYFRINSEQFGQFE---------RTLIIADEGAEVMYMEGCTAPKF 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V KG K+++ +QN S N
Sbjct: 243 ETATLHSAVVELVAMKGAKIQYVTVQNWSSN 273
>gi|440718849|ref|ZP_20899288.1| FeS assembly protein SufD [Rhodopirellula baltica SWK14]
gi|436435924|gb|ELP29729.1| FeS assembly protein SufD [Rhodopirellula baltica SWK14]
Length = 464
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 22/194 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--SSSLD 121
+S +P L LR S + WP+R+ E + TD I++ QI P +++ D
Sbjct: 47 ASRKDEPQWLTDLRRESFSHADAMDWPARRSEEWIRTD---IRTFQINKFAPPVEATAGD 103
Query: 122 VSTDAQF-----PSLVL--IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V Q P VL D + + +L+ GV GSL + +V F+
Sbjct: 104 VPAVHQLRDGVEPGGVLETYDSQVISESLDEELAAKGVIFGSLERLCREQPDKVRPFLYT 163
Query: 175 FQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F +++ +YVP G +E PIYL +GG +
Sbjct: 164 VVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGT--------DTAHTL 215
Query: 233 VLVEEGGEVGIIEE 246
+++E+G E ++ E
Sbjct: 216 IVLEDGAEATVLHE 229
>gi|262037686|ref|ZP_06011129.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
gi|261748298|gb|EEY35694.1| FeS assembly protein SufB [Leptotrichia goodfellowii F0264]
Length = 471
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KV P+ Y + + E G + +++VEEG ++ IE +
Sbjct: 192 VYVPKGVKVNQPLQSYFRLNAAEAGQFE---------HTLIIVEEGADLHFIEGCSAPKY 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+E+++ KG ++R+S ++N S N
Sbjct: 243 RRNALHAGAVELIVRKGARLRYSTIENWSRN 273
>gi|209549491|ref|YP_002281408.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535247|gb|ACI55182.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 424
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 29/227 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D +DA
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSDA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A + DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSTVLAVIQGHA-SQKAAADGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQTHTRLPVA-------FASGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE + G D + V ++ +G+G ++ LQ + H+
Sbjct: 185 ATVIERHLAVTG-DPALVSHVSDITVGEGAELTWIILQQHGVEDTHL 230
>gi|119716776|ref|YP_923741.1| FeS assembly protein SufB [Nocardioides sp. JS614]
gi|119537437|gb|ABL82054.1| Iron-regulated ABC transporter membrane component SufB
[Nocardioides sp. JS614]
Length = 472
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E +
Sbjct: 193 VYVPPGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPVYSS 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E++I KGG+ R++ +QN S N
Sbjct: 246 DSLHSAVVEIIIKKGGRCRYTTIQNWSNN 274
>gi|167756730|ref|ZP_02428857.1| hypothetical protein CLORAM_02271 [Clostridium ramosum DSM 1402]
gi|237734449|ref|ZP_04564930.1| FeS assembly protein sufB [Mollicutes bacterium D7]
gi|365832365|ref|ZP_09373899.1| FeS assembly protein SufB [Coprobacillus sp. 3_3_56FAA]
gi|374625870|ref|ZP_09698285.1| FeS assembly protein SufB [Coprobacillus sp. 8_2_54BFAA]
gi|167702905|gb|EDS17484.1| FeS assembly protein SufB [Clostridium ramosum DSM 1402]
gi|229382269|gb|EEO32360.1| FeS assembly protein sufB [Coprobacillus sp. D7]
gi|365260543|gb|EHM90497.1| FeS assembly protein SufB [Coprobacillus sp. 3_3_56FAA]
gi|373914818|gb|EHQ46628.1| FeS assembly protein SufB [Coprobacillus sp. 8_2_54BFAA]
Length = 468
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++NG IYVP G K++ P+ + ++S+++ R +++V++G +
Sbjct: 174 FSALNGAVWSGGSFIYVPPGVKLDKPLQSYF------RINSEQMA-QFERTLIIVDKGAD 226
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +E + V+E+++G+G K R++ +QN S N
Sbjct: 227 IHYVEGCTAPSYSRDSLHAGVVEIIVGEGAKCRYTTIQNWSNN 269
>gi|238897306|ref|YP_002922983.1| cysteine desulfurase activator complex subunit SufB [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465061|gb|ACQ66835.1| putative transport protein associated with Fe-S cluster assembly
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 500
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 198 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTIIIAD 248
Query: 237 EGGEVGIIEEFVG--KEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE +E + + A V+EV++ K +V++S +QN
Sbjct: 249 EGSYVSYIEGCSAPVREASQLHAA--VVEVILHKNAEVKYSTVQN 291
>gi|340794429|ref|YP_004759892.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
variabile DSM 44702]
gi|340534339|gb|AEK36819.1| ABC-type transport system involved in Fe-S cluster assembly
permease component [Corynebacterium variabile DSM 44702]
Length = 492
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E
Sbjct: 213 VYVPKGVHVEIPL-QAYFRINTENMGQFE------RTLIIVDEGAFVHYVEGCTAPIYQS 265
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++++E+++ KGG+ R++ +QN S N
Sbjct: 266 DSLHSAIVEIIVKKGGRCRYTTIQNWSTN 294
>gi|149175399|ref|ZP_01854020.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
gi|148845667|gb|EDL60009.1| hypothetical protein PM8797T_18084 [Planctomyces maris DSM 8797]
Length = 470
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G +E P+ Y + N+ + R +V+V+EG +E +
Sbjct: 191 VYVPPGVHIEFPL-QAYFRINSENMGQFE------RTLVIVDEGASCHYVEGCTAPTYSS 243
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG+ R++ +QN S N ++
Sbjct: 244 NSLHSAVVEIIVKKGGRFRYTTIQNWSNNVYNL 276
>gi|417306259|ref|ZP_12093178.1| FeS assembly protein SufD [Rhodopirellula baltica WH47]
gi|327537446|gb|EGF24171.1| FeS assembly protein SufD [Rhodopirellula baltica WH47]
Length = 464
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 22/194 (11%)
Query: 64 SSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP--SSSLD 121
+S +P L LR S + WP+R+ E + TD I++ QI P +++ D
Sbjct: 47 ASRKDEPQWLTDLRRESFSHADAMDWPARRSEEWIRTD---IRTFQINKFAPPVEATAGD 103
Query: 122 VSTDAQF-----PSLVL--IDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
V Q P VL D + + +L+ GV GSL + +V F+
Sbjct: 104 VPAVHQLRDGVEPGGVLETYDSQVISESLDEELAAKGVIFGSLERLCREQPDKVRPFLYT 163
Query: 175 FQCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F +++ +YVP G +E PIYL +GG +
Sbjct: 164 VVDPDYDKFAALHAAFWSGGQFLYVPRGVVIEKPIYLGSTLSDGGT--------DTAHTL 215
Query: 233 VLVEEGGEVGIIEE 246
+++E+G E ++ E
Sbjct: 216 IVLEDGAEATVLHE 229
>gi|407464364|ref|YP_006775246.1| FeS assembly protein SufB [Candidatus Nitrosopumilus sp. AR2]
gi|407047552|gb|AFS82304.1| FeS assembly protein SufB [Candidatus Nitrosopumilus sp. AR2]
Length = 466
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG EV IE +
Sbjct: 187 IYVPPGVKVDMPL-QAYFRINAENIGQFE------RTLIIVDEGAEVHYIEGCTAPVYSS 239
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+V K K+R++ +QN S + ++
Sbjct: 240 ESLHSAVVELVALKDAKLRYTTIQNWSADVYNL 272
>gi|313901166|ref|ZP_07834654.1| FeS assembly protein SufB [Clostridium sp. HGF2]
gi|346314232|ref|ZP_08855753.1| hypothetical protein HMPREF9022_01410 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|373121479|ref|ZP_09535347.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 21_3]
gi|422327495|ref|ZP_16408522.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 6_1_45]
gi|312954124|gb|EFR35804.1| FeS assembly protein SufB [Clostridium sp. HGF2]
gi|345906590|gb|EGX76314.1| hypothetical protein HMPREF9022_01410 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|371663335|gb|EHO28525.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 6_1_45]
gi|371665497|gb|EHO30662.1| FeS assembly protein SufB [Erysipelotrichaceae bacterium 21_3]
Length = 466
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G K+E P+ Y + + G + R +++V+EG +V +E
Sbjct: 187 IYVPKGVKLEKPLQSYFRINTERMGQFE---------RTLIIVDEGADVHYVEGCTAPTY 237
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+E+ + K + R+S +QN S N
Sbjct: 238 SKDSLHAAVVEIFVHKNARCRYSTVQNWSDN 268
>gi|331697201|ref|YP_004333440.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
gi|326951890|gb|AEA25587.1| FeS assembly protein SufB [Pseudonocardia dioxanivorans CB1190]
Length = 478
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+V+ KGG+ R++ +QN S N ++
Sbjct: 252 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 284
>gi|94984579|ref|YP_603943.1| FeS assembly protein SufD [Deinococcus geothermalis DSM 11300]
gi|94554860|gb|ABF44774.1| Iron-regulated ABC transporter permease protein SufD [Deinococcus
geothermalis DSM 11300]
Length = 450
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G +VE P+ + E G + R +V+ EE +V I+E ++ D
Sbjct: 173 VYVPRGVEVELPLGSFRVMSEAGT-------YTATRTLVVAEENAQVTFIDE---QDSED 222
Query: 255 C--YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
+A +E+V+ +G ++R+ +QN HI+
Sbjct: 223 LPGTYAIGAVELVVKQGARLRYVSIQNWGKGVTHIQ 258
>gi|452973258|gb|EME73080.1| FeS cluster assembly protein SufB [Bacillus sonorensis L12]
Length = 465
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ +GG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKEGGYCRYTTIQNWANN 267
>gi|298291336|ref|YP_003693275.1| FeS assembly protein SufD [Starkeya novella DSM 506]
gi|296927847|gb|ADH88656.1| FeS assembly protein SufD [Starkeya novella DSM 506]
Length = 437
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 20/241 (8%)
Query: 57 EDSLPSSSSSLPQPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
E +L + LP L LR +++++ P R+ E +++TD + + P+
Sbjct: 13 EQALIAELGGLPAGTDRLADLRRAAARSFEEHGLPHRRVEEWKYTDLRTLMRDAV-PVAG 71
Query: 116 PSSSLDVST------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL---LGVSDGIMK 166
++ + + + +V+ +G + +L+ L G+ V +L + D ++
Sbjct: 72 SAAVAEADARATALREVEVRRIVVANGAVVPELSDLAGLEAGLAVTTLAAAIASGDEVLS 131
Query: 167 RVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPI 226
RV + D ++N A D V+ V G +E PI++ ++
Sbjct: 132 RVGGILPGRY--DAALALNTALAKDGVVLTVAPGAILERPIHVAHV------FAGDAAAA 183
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
S R +V+V G ++ +E F G E Y ANSV E V+G + LQ + +A H
Sbjct: 184 SYARSLVVVGAGAKLTYVESFEGPEAI-AYQANSVTEFVVGDEAHLDVVRLQQEGGSAFH 242
Query: 287 I 287
+
Sbjct: 243 L 243
>gi|78484926|ref|YP_390851.1| FeS assembly protein SufD [Thiomicrospira crunogena XCL-2]
gi|78363212|gb|ABB41177.1| Iron-regulated ABC transporter permease protein SufD
[Thiomicrospira crunogena XCL-2]
Length = 434
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 26/237 (10%)
Query: 53 AESLEDSLPSSSSSLPQPLPLQKL---RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQ 109
A L D L + S L + + L R ++ + LLS P+RKDE +++T + S
Sbjct: 13 ARQLLDQLVAESQRLNEQTEAEALIEKRQAAQERLLSLGLPTRKDEDWQYTSLIPMLSHA 72
Query: 110 IQPITRPSSSLDVSTDAQF------PSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSD 162
+ +P+ ++ + F L +DG F + + +PD + + + +D
Sbjct: 73 FE--IKPAKAIMLDDIQSFLPEFDTIRLTFVDGVFSEELSSGFDFIPDALSIE--MADAD 128
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
I I+ + D F +N M I + G + P+++ NV ++
Sbjct: 129 AIQS-----INLEEQADAFQLMNEMLLDQGLTISLEKGEALAVPVHIL-------NVQTQ 176
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
N R V + E E+ +++FV E N V +V + + + LQ+
Sbjct: 177 SEQWVNLRTQVELAENSEMMFLQQFVSLESGCSALVNDVAKVTVADHARFKQIVLQD 233
>gi|120556063|ref|YP_960414.1| FeS assembly protein SufD [Marinobacter aquaeolei VT8]
gi|120325912|gb|ABM20227.1| Iron-regulated ABC transporter permease protein SufD [Marinobacter
aquaeolei VT8]
Length = 428
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 16/239 (6%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR + L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGESLPEPLL--ALRKERASALVDMPLPTRKTENWKYS-SKYLKLADDMAISLPAEG 68
Query: 120 LDVSTDAQFPS--LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC 177
P +V I+G + A +L DG+ + S +++ + +S +
Sbjct: 69 -KTGNSLAVPGYKVVFINGVMIPEASEYPDL-DGIEILSFNDLANDEAEALSAKLGSTLN 126
Query: 178 GD--LFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D F +NG D I + G ++ P+++ + + + PR+ V
Sbjct: 127 HDQAQFARLNGARFEDGLFIRLKPGAVLDQPLFIIH------ETSADASGSAYPRIYVEA 180
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
++ ++EE+ G ++V E + G V L + N HI T V Q
Sbjct: 181 GANSQLTLVEEYTSS-GEASALVSTVTEFNLADGANVTSIRLNMEGENVQHIGATGVLQ 238
>gi|312109637|ref|YP_003987953.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
gi|336234052|ref|YP_004586668.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|423718750|ref|ZP_17692932.1| FeS assembly protein sufB [Geobacillus thermoglucosidans
TNO-09.020]
gi|311214738|gb|ADP73342.1| FeS assembly protein SufB [Geobacillus sp. Y4.1MC1]
gi|335360907|gb|AEH46587.1| FeS assembly protein SufB [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368352|gb|EID45625.1| FeS assembly protein sufB [Geobacillus thermoglucosidans
TNO-09.020]
Length = 465
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
+G + +D +K D E+ + F ++N IYVP G KV+ P+
Sbjct: 139 LGVIFKDTDSALKENEDLFREYFAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPL 198
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
Y + N+ + R +++V+EG V +E ++V+E+++
Sbjct: 199 -QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPIYTTASLHSAVVEIIVK 251
Query: 268 KGGKVRHSYLQNQSLN 283
K R++ +QN S N
Sbjct: 252 KDAYCRYTTIQNWSNN 267
>gi|408787050|ref|ZP_11198783.1| iron-sulfur cluster assembly protein [Rhizobium lupini HPC(L)]
gi|408487003|gb|EKJ95324.1| iron-sulfur cluster assembly protein [Rhizobium lupini HPC(L)]
Length = 423
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 22/235 (9%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPI 113
+L D+ + S LP + RD L + P+R+ E + +TD S++++ P
Sbjct: 15 ALVDAYTAKFSELPGDGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRTV---PE 71
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFI 172
RP+ ++ +T S V ++ + ++ + DGV V +D ++ + +
Sbjct: 72 DRPAPVIEKATSVVAGSSV---AYVLHGTADIGKV-DGVSVSRF---ADSLLDGSAAAGL 124
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
+E D ING D V+ +PA +++ PI L+ ++ G + P+ +
Sbjct: 125 AEASKDDTIGRINGSFVRDGLVVEIPADAELDKPIELQ--AIHGAGQVHSRFPVRFGK-- 180
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G + +IE + +D +SV ++V+ G + LQ Q H+
Sbjct: 181 -----GSKATVIERHLSVT-SDAALVSSVSDIVVEDGAEATWILLQQQGAADIHL 229
>gi|348173992|ref|ZP_08880886.1| putative iron-regulated ABC-type transporter [Saccharopolyspora
spinosa NRRL 18395]
Length = 487
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E +
Sbjct: 208 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYSS 260
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 261 DSLHSAVVEIIVKKGGRCRYTTIQNWSTN 289
>gi|421588792|ref|ZP_16034033.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
gi|403706434|gb|EJZ21697.1| FeS assembly protein SufD [Rhizobium sp. Pop5]
Length = 424
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 39/232 (16%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P + D ++A
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TVPPQAGDAGSEA 80
Query: 127 QFP------SLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQ 176
P L +I G A L +S + + GS +DG+ SD
Sbjct: 81 LEPLVTGSSVLAVIQGHSSQKAAADGLGISAYSEHLINGS---TADGLDALGSD------ 131
Query: 177 CGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLV 235
D ING D V+ VPA +E P+ ++++ GG + + +LP+S P V
Sbjct: 132 --DAIGRINGSFVRDGYVVDVPAETVLEEPLEIQFIHA-GGQIHT-RLPVSFGPGV---- 183
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +IE G D + + V ++ +G+G ++ LQ Q H+
Sbjct: 184 ----KATVIERHRAVTG-DAAFVSHVSDITVGEGTELTWIILQQQGAEDTHL 230
>gi|335429849|ref|ZP_08556747.1| SUF system FeS cluster assembly protein [Haloplasma contractile
SSD-17B]
gi|334889859|gb|EGM28144.1| SUF system FeS cluster assembly protein [Haloplasma contractile
SSD-17B]
Length = 484
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 144 NLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGV------IYV 197
NL L D G + +D ++ + E+ + ++ N A + V IYV
Sbjct: 151 NLKELEDQ---GVIFMDTDSALREYPELFKEYFAKSVPYTDNKFAALNTAVWSGGSFIYV 207
Query: 198 PAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDC 255
P G KVE P+ Y + S + G + R +++V+EG V +E +
Sbjct: 208 PKGVKVEKPLQSYFRINSEQMGQFE---------RTLIIVDEGASVHYVEGCTAPIYSQD 258
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLN-------------AAHIKW 289
+V+E+ + G R+S +QN + N +AH++W
Sbjct: 259 SLHAAVVEIFVRDEGYCRYSTVQNWANNIINLVTKRAMVDRSAHMEW 305
>gi|393782302|ref|ZP_10370487.1| FeS assembly protein SufD [Bacteroides salyersiae CL02T12C01]
gi|392673573|gb|EIY67032.1| FeS assembly protein SufD [Bacteroides salyersiae CL02T12C01]
Length = 447
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 89 WPSRKDEPFRFTDTSM-------IKSSQIQPITRPSSSLDVSTDAQFPSLVLI--DGFIQ 139
+P+RK E +++TD S + ++++ P SL + D F
Sbjct: 42 FPTRKQEKYKYTDISKFFEPDYGLNLNRLEIPVNPYEVFKCDVPNMSTSLFFVVNDAFYS 101
Query: 140 NSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF--QCGDLFWSINGMGAPDLGVIYV 197
L S+LP+GV G L +++ + V + S+ D + N A D ++YV
Sbjct: 102 RK-LPKSHLPEGVLFGGLKEMAEQHPELVKKYYSKLADTSKDGVTAFNTAFAQDGILMYV 160
Query: 198 PAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND--C 255
P VE P+ L +++ +V+ + N RV++++E+G + ++ + D
Sbjct: 161 PKNVIVERPVQL--VNILRADVNF----MVNRRVLIILEDGAQARLL---ICDHAMDNVN 211
Query: 256 YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
+ + V+EV G+ L+ + I VRQ
Sbjct: 212 FLSTQVIEVFAGENSVFDLYELEETHTSTVRISNLYVRQ 250
>gi|422014535|ref|ZP_16361145.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
gi|414100755|gb|EKT62366.1| cysteine desulfurase activator complex subunit SufD [Providencia
burhodogranariea DSM 19968]
Length = 434
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 148 LPDGVYVGSLLGVSDGIMKRV----SDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKV 203
L DG Y +L V G + D + + ++F + A VI++ A
Sbjct: 102 LVDGRYSSTLSSVDMGPFQVALLDNQDMLPDAVNSEIFLHLTESLAQQPIVIHLAANQIA 161
Query: 204 ENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLE 263
+ P+YL L++ G+ D ++ S R + ++ + +IE FV + ++ S L
Sbjct: 162 QKPLYL--LNISSGH-DGTEVNTSQYRYHITLDTNSKAQVIEHFVSF-NDKAHFTGSRLT 217
Query: 264 VVIGKGGKVRHSYLQNQSLNAAHI 287
V +G + RH L N++ A H
Sbjct: 218 VEVGDNAQYRHFKLNNENNQAQHF 241
>gi|58038583|ref|YP_190547.1| ABC transporter permease [Gluconobacter oxydans 621H]
gi|58000997|gb|AAW59891.1| ABC transporter permease protein [Gluconobacter oxydans 621H]
Length = 392
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
I VPAG + L +S+ G S L R+V+ E+G + + + G EG
Sbjct: 123 IRVPAGT---DAGLLTLVSLSDGQDVSTHL---QHRIVL--EDGASLTLYDVSAG-EGR- 172
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
Y AN ++V+GKG +RH +Q +SL A H+
Sbjct: 173 -YIANPRFDIVVGKGATLRHVKVQRESLTATHL 204
>gi|406837191|ref|ZP_11096785.1| ABC transporter-associated protein [Lactobacillus vini DSM 20605]
Length = 470
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ PI Y + GN + R +++V+EG V +E ++
Sbjct: 191 IYVPKGVKVKTPI-QSYFRINAGNSGQFE------RTLIIVDEGASVNYVEGCTAPNYSE 243
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+V+EV + K R++ +QN S N
Sbjct: 244 DSLHAAVVEVNVLKDAYCRYTTIQNWSNN 272
>gi|217970310|ref|YP_002355544.1| FeS assembly protein SufD [Thauera sp. MZ1T]
gi|217507637|gb|ACK54648.1| FeS assembly protein SufD [Thauera sp. MZ1T]
Length = 454
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 38/252 (15%)
Query: 63 SSSSLP-QPLP-LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSL 120
+++ LP LP L +LR+ + WP+ + E +R T + + + Q + +
Sbjct: 14 TAADLPGADLPWLVRLREDAIDRFADEGWPTTRRENWRHTSLAFM-AQQALAVRETVAPE 72
Query: 121 DVSTD-----------AQFPS-------------LVLIDGFIQNSALNLSNLPDGVYVGS 156
V D AQ P+ +V +DG + + LP GV +GS
Sbjct: 73 AVVADLRARYRAALGTAQDPARKAVESAGDDGHWVVFVDGHFAPALSAIGGLPGGVRIGS 132
Query: 157 LLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEG 216
L + V + G+ ++N A D I + G VE PI+L +L+
Sbjct: 133 LADALGQTPEAVEAAFGQAGDGEAPAALNAALAADGAWIRLGRGVAVEPPIHLVFLTA-- 190
Query: 217 GNVDSKKLPISNPRVVVLVEEGGEVGIIEEF-VGKEGNDCYWANSVLEVVIGKGGKVRHS 275
V + L R +V+ E G + I+E + G G+ +V V+ + V H
Sbjct: 191 -TVADQHL-----RNLVVTEPGAQATIVEHYPAGAAGSTL--TTAVTRVLAAQDSHVTHL 242
Query: 276 YLQNQSLNAAHI 287
LQ ++ A H+
Sbjct: 243 KLQQEAPEAIHL 254
>gi|217977769|ref|YP_002361916.1| FeS assembly protein SufD [Methylocella silvestris BL2]
gi|217503145|gb|ACK50554.1| FeS assembly protein SufD [Methylocella silvestris BL2]
Length = 448
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 29/205 (14%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS------- 119
LP +KLR+++ P R+ E + +TD + + P+ P+S+
Sbjct: 27 LPGGPDARKLREAAFSKFYDAGLPHRRIEAWHYTDLRALMRTA-APLAEPASAEALAALR 85
Query: 120 LDVSTDAQFPSLVLIDGFIQNSALNLSN-LPDGVYVGSLLGVSDGIMKRVSDFIS----- 173
++ A LV++DG LS+ P+GV + SL V + D I+
Sbjct: 86 EKLAASAPGQRLVVVDGVF---VAELSDPAPEGVVIQSLASV---LAAGRPDLIALLAAQ 139
Query: 174 EFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+F D S+N D VI V G V PI + Y S + + S R +
Sbjct: 140 DFGGTDTIVSLNAALMQDGVVIEVAPGAVVAEPIRIVYAST------ASEPRASYARSAL 193
Query: 234 LVEEGGEVGIIEEFVGKEG---NDC 255
+V G V +IE+ G + N C
Sbjct: 194 IVGAGASVRLIEDDFGAQAAQTNRC 218
>gi|421766396|ref|ZP_16203170.1| Iron-sulfur cluster assembly protein SufB [Lactococcus garvieae
DCC43]
gi|407625164|gb|EKF51879.1| Iron-sulfur cluster assembly protein SufB [Lactococcus garvieae
DCC43]
Length = 465
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G K E PI Y + + + G + R +++V+EG + +E
Sbjct: 186 VYVPKGVKCEIPIQAYFRINNEKSGQFE---------RTLIIVDEGASIQYVEGCTAPTY 236
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +V+E+ +GG +R+S +QN S N ++
Sbjct: 237 SSASLHAAVVEIFCEEGGYMRYSTIQNWSDNVYNL 271
>gi|410943157|ref|ZP_11374898.1| ABC transporter permease [Gluconobacter frateurii NBRC 101659]
Length = 398
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 227 SNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAH 286
++ R +++EEG + + + G EG Y N L++V+GKG ++ H LQ SL A H
Sbjct: 153 THLRHRIVLEEGASLTLFDVNAG-EGR--YVTNPRLDIVVGKGARLTHVKLQQDSLTAGH 209
Query: 287 IKWTA 291
+ A
Sbjct: 210 LAIVA 214
>gi|410085873|ref|ZP_11282587.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
gi|409767421|gb|EKN51497.1| Iron-sulfur cluster assembly protein SufD [Morganella morganii
SC01]
Length = 434
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%), Gaps = 29/214 (13%)
Query: 82 QTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFPSL-----VLIDG 136
Q T +P+ E + +T + + + Q T +L+V +A SL VL+DG
Sbjct: 46 QQAQKTGFPAFHQEDWHYTSLTPLLEADYQDKT---GTLNVLPEAVLTSLNAYRIVLVDG 102
Query: 137 FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQC---GDLFWSINGMGAPDLG 193
A S+ GV+ S V+D SEF G++F + A
Sbjct: 103 VF---APQWSDADFGVFELS-----------VADRHSEFPAPVNGEIFLHLTESLAQTPL 148
Query: 194 VIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGN 253
+I V AG + E P+Y+ +S + L + + R + + V +IE F+ +
Sbjct: 149 MIRVKAGAQAEKPLYIVNISTAHNDF----LNMRHSRYHLDIGANAAVSVIEHFISPDEQ 204
Query: 254 DCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++ + + +G+ RH L ++ A H
Sbjct: 205 SAHFTGARMTANVGENSDFRHLKLGFENPQAYHF 238
>gi|335357032|ref|ZP_08548902.1| ABC transporter-associated protein [Lactobacillus animalis KCTC
3501]
Length = 467
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV PI Y + GN + R +++V+EG + +E ++
Sbjct: 188 IYVPKGVKVSVPI-QSYFRINAGNSGQFE------RTLIIVDEGASINYVEGCTAPNYSE 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+V+EV + K R++ +QN S N ++ R L
Sbjct: 241 DSLHAAVVEVNVLKDAYCRYTTIQNWSDNVYSLETKRARAL 281
>gi|119476386|ref|ZP_01616737.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
gi|119450250|gb|EAW31485.1| Cysteine desulfurase activator SufB [marine gamma proteobacterium
HTCC2143]
Length = 418
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP-SSSLDVSTDAQFPSLVLID 135
R S + L + WP+RK E +++T +M+ + + + ++ + L+L+D
Sbjct: 23 RQQSLELLQQSRWPTRKTEAWKYTSVNMLVDATFAETSDGIFDAPELIDNLDSIDLLLVD 82
Query: 136 GFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-----DLFWSINGMGAP 190
G +++ ++ +LP G+ S+ ++D +++ ++ +E G F +N + A
Sbjct: 83 GVLRS---DIGDLPSGL---SIYSIADTPIEQ-REWAAEVFTGAKPSKHYFGLVNDVLAT 135
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGK 250
+I V G KV+ PI + G S+ R+++ + E IIE+F G+
Sbjct: 136 AGVLIDVAEGVKVDRPIRVICRQSNGCE--------SHTRILMRLGSNAEAVIIEDFAGE 187
Query: 251 EGNDCYWANSVLEVVIGKGGKVRH 274
+ + E ++G+ + H
Sbjct: 188 VKS---FNTGFSEYIVGESATLEH 208
>gi|347521005|ref|YP_004778576.1| hypothetical protein LCGT_0399 [Lactococcus garvieae ATCC 49156]
gi|385832368|ref|YP_005870143.1| hypothetical protein [Lactococcus garvieae Lg2]
gi|420144712|ref|ZP_14652200.1| Hypothetical protein Y7C_89250 [Lactococcus garvieae IPLA 31405]
gi|343179573|dbj|BAK57912.1| conserved hypothetical protein [Lactococcus garvieae ATCC 49156]
gi|343181521|dbj|BAK59859.1| conserved hypothetical protein [Lactococcus garvieae Lg2]
gi|391856164|gb|EIT66713.1| Hypothetical protein Y7C_89250 [Lactococcus garvieae IPLA 31405]
Length = 465
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G K E PI Y + + + G + R +++V+EG + +E
Sbjct: 186 VYVPKGVKCEIPIQAYFRINNEKSGQFE---------RTLIIVDEGASIQYVEGCTAPTY 236
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +V+E+ +GG +R+S +QN S N ++
Sbjct: 237 SSASLHAAVVEIFCEEGGYMRYSTIQNWSDNVYNL 271
>gi|296331746|ref|ZP_06874213.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675864|ref|YP_003867536.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151071|gb|EFG91953.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414108|gb|ADM39227.1| FeS cluster formation protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 465
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|433447123|ref|ZP_20410790.1| cysteine desulfurase [Anoxybacillus flavithermus TNO-09.006]
gi|432000090|gb|ELK20995.1| cysteine desulfurase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVDTPLQ-AYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGAYCRYTTIQNWANN 267
>gi|308174997|ref|YP_003921702.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|375363691|ref|YP_005131730.1| hypothetical protein BACAU_3001 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384165764|ref|YP_005547143.1| FeS cluster formation protein [Bacillus amyloliquefaciens LL3]
gi|421730349|ref|ZP_16169478.1| FeS cluster formation protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451345603|ref|YP_007444234.1| FeS cluster formation protein [Bacillus amyloliquefaciens IT-45]
gi|452856878|ref|YP_007498561.1| FeS cluster formation protein [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|307607861|emb|CBI44232.1| FeS cluster formation protein [Bacillus amyloliquefaciens DSM 7]
gi|328913319|gb|AEB64915.1| FeS cluster formation protein [Bacillus amyloliquefaciens LL3]
gi|371569685|emb|CCF06535.1| UPF0051 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|407076315|gb|EKE49299.1| FeS cluster formation protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849361|gb|AGF26353.1| FeS cluster formation protein [Bacillus amyloliquefaciens IT-45]
gi|452081138|emb|CCP22905.1| FeS cluster formation protein [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 465
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|16080319|ref|NP_391146.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311212|ref|ZP_03593059.1| hypothetical protein Bsubs1_17726 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315539|ref|ZP_03597344.1| hypothetical protein BsubsN3_17642 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320454|ref|ZP_03601748.1| hypothetical protein BsubsJ_17605 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324738|ref|ZP_03606032.1| hypothetical protein BsubsS_17756 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321312812|ref|YP_004205099.1| FeS cluster formation protein [Bacillus subtilis BSn5]
gi|350267468|ref|YP_004878775.1| FeS assembly protein SufB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|384176876|ref|YP_005558261.1| FeS assembly protein SufB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|398308205|ref|ZP_10511679.1| FeS assembly protein SufB [Bacillus mojavensis RO-H-1]
gi|402777426|ref|YP_006631370.1| feS cluster formation protein [Bacillus subtilis QB928]
gi|418031528|ref|ZP_12670013.1| hypothetical protein BSSC8_09570 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428280780|ref|YP_005562515.1| hypothetical protein BSNT_04841 [Bacillus subtilis subsp. natto
BEST195]
gi|430757976|ref|YP_007208231.1| hypothetical protein A7A1_2484 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449095708|ref|YP_007428199.1| FeS cluster formation protein [Bacillus subtilis XF-1]
gi|452913041|ref|ZP_21961669.1| feS assembly protein SufB [Bacillus subtilis MB73/2]
gi|81342165|sp|O32162.1|SUFB_BACSU RecName: Full=FeS cluster assembly protein SufB
gi|2635763|emb|CAB15256.1| FeS cluster formation protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485737|dbj|BAI86812.1| hypothetical protein BSNT_04841 [Bacillus subtilis subsp. natto
BEST195]
gi|320019086|gb|ADV94072.1| FeS cluster formation protein [Bacillus subtilis BSn5]
gi|349596100|gb|AEP92287.1| FeS assembly protein SufB [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349600355|gb|AEP88143.1| FeS assembly protein SufB [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|351472587|gb|EHA32700.1| hypothetical protein BSSC8_09570 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402482605|gb|AFQ59114.1| FeS cluster formation protein [Bacillus subtilis QB928]
gi|407962098|dbj|BAM55338.1| FeS cluster formation protein [Bacillus subtilis BEST7613]
gi|407966112|dbj|BAM59351.1| FeS cluster formation protein [Bacillus subtilis BEST7003]
gi|430022496|gb|AGA23102.1| Hypothetical protein YurU [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449029623|gb|AGE64862.1| FeS cluster formation protein [Bacillus subtilis XF-1]
gi|452118069|gb|EME08463.1| feS assembly protein SufB [Bacillus subtilis MB73/2]
Length = 465
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|386759874|ref|YP_006233091.1| FeS assembly protein SufB [Bacillus sp. JS]
gi|398306272|ref|ZP_10509858.1| FeS assembly protein SufB [Bacillus vallismortis DV1-F-3]
gi|443634218|ref|ZP_21118393.1| FeS assembly protein SufB [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|384933157|gb|AFI29835.1| FeS assembly protein SufB [Bacillus sp. JS]
gi|443345894|gb|ELS59956.1| FeS assembly protein SufB [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 465
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|212640282|ref|YP_002316802.1| cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
gi|212561762|gb|ACJ34817.1| Cysteine desulfurase activator SufB [Anoxybacillus flavithermus
WK1]
Length = 478
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 154 VGSLLGVSDGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI 207
+G + +D +K D E + F ++N IYVP G KV+ P+
Sbjct: 152 LGVIFKDTDSALKENEDLFREHWAKVVPPTDNKFAALNSAVWSGGSFIYVPKGVKVDTPL 211
Query: 208 YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIG 267
Y + N+ + R +++V+EG V +E ++V+E+++
Sbjct: 212 QA-YFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTTNSLHSAVVEIIVK 264
Query: 268 KGGKVRHSYLQNQSLN 283
KG R++ +QN + N
Sbjct: 265 KGAYCRYTTIQNWANN 280
>gi|408403700|ref|YP_006861683.1| FeS cluster assembly protein SufB [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364296|gb|AFU58026.1| FeS cluster assembly protein SufB [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 467
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP KVE P+ Y + N+ + R +++ +EG EV IE
Sbjct: 188 IYVPPNVKVELPL-QAYFRINAENIGQFE------RTLIIADEGAEVHYIEGCTAPVYTT 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQS 281
++V+E++ KG K+R++ +QN S
Sbjct: 241 ESLHSAVVELIAKKGAKIRYTTIQNWS 267
>gi|423123357|ref|ZP_17111036.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5250]
gi|376401988|gb|EHT14589.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5250]
Length = 495
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILIAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|384160877|ref|YP_005542950.1| FeS cluster formation protein [Bacillus amyloliquefaciens TA208]
gi|384169957|ref|YP_005551335.1| FeS assembly protein [Bacillus amyloliquefaciens XH7]
gi|328554965|gb|AEB25457.1| FeS cluster formation protein [Bacillus amyloliquefaciens TA208]
gi|341829236|gb|AEK90487.1| FeS assembly protein [Bacillus amyloliquefaciens XH7]
Length = 465
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|154687376|ref|YP_001422537.1| hypothetical protein RBAM_029750 [Bacillus amyloliquefaciens FZB42]
gi|384266795|ref|YP_005422502.1| hypothetical protein BANAU_3165 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385266151|ref|ZP_10044238.1| FeS assembly protein SufB [Bacillus sp. 5B6]
gi|387899868|ref|YP_006330164.1| Fe-S cluster assembly protein SufB [Bacillus amyloliquefaciens Y2]
gi|394994401|ref|ZP_10387122.1| YurU [Bacillus sp. 916]
gi|429506542|ref|YP_007187726.1| Fe-S cluster assembly protein SufB [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|154353227|gb|ABS75306.1| YurU [Bacillus amyloliquefaciens FZB42]
gi|380500148|emb|CCG51186.1| UPF0051 protein [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|385150647|gb|EIF14584.1| FeS assembly protein SufB [Bacillus sp. 5B6]
gi|387173978|gb|AFJ63439.1| Fe-S cluster assembly protein SufB [Bacillus amyloliquefaciens Y2]
gi|393804803|gb|EJD66201.1| YurU [Bacillus sp. 916]
gi|429488132|gb|AFZ92056.1| Fe-S cluster assembly protein SufB [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 465
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>gi|86357865|ref|YP_469757.1| ABC transporter involved in Fe-S cluster assembly, permease
[Rhizobium etli CFN 42]
gi|86281967|gb|ABC91030.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CFN 42]
Length = 424
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD 125
LP + LRD L P+R+ E + +TD ++++ IQ S L+
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDFKNLLRGLPIQAGDAGSDPLEPLV- 85
Query: 126 AQFPSLVLIDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLF 181
A L +I G A L +S + + GS G D + SD D
Sbjct: 86 AGSSVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLDALG---SD--------DAV 134
Query: 182 WSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEV 241
ING D V+ VP ++E+P+ +++ + G +LP+S G +
Sbjct: 135 GRINGSFVRDGYVVDVPDDTELEDPLEIQF--IHAGGQTHTRLPVS-------FGAGVKA 185
Query: 242 GIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE G D + + + ++ +GKG ++ LQ Q + H+
Sbjct: 186 TVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGADDTHL 230
>gi|354614231|ref|ZP_09032109.1| FeS assembly protein SufB [Saccharomonospora paurometabolica YIM
90007]
gi|353221416|gb|EHB85776.1| FeS assembly protein SufB [Saccharomonospora paurometabolica YIM
90007]
Length = 481
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIVVDEGAYVHYVEGCTAPIYQS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG+ R++ +QN S N
Sbjct: 255 DSLHSAVVEIVVKKGGRCRYTTIQNWSGN 283
>gi|424881755|ref|ZP_18305387.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392518118|gb|EIW42850.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 424
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 41/245 (16%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L ++ + LP + LRD L P+R+ E + +TD + T
Sbjct: 15 ALIEAFNNEIGELPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------T 68
Query: 115 RPSSSLDVSTDAQFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVS-------D 162
P + D ++A P L+DG IQ + D V LG+S D
Sbjct: 69 LPLQAGDAGSNALAP---LVDGSTVLPVIQGRS-------DQKAVAGDLGISAYSEHLLD 118
Query: 163 GIMKRVSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSK 222
G + + D ING D VI VP ++E+P+ ++++ GG V +
Sbjct: 119 G---SAAGGLDALGSDDAVGRINGSFVRDGYVIDVPDNTELEDPLEIQFIHA-GGQVHT- 173
Query: 223 KLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSL 282
+LP++ V + +IE + G D + V ++V+G+G ++ LQ Q
Sbjct: 174 RLPVAFGAAV-------KATVIERHLTVTG-DAALVSHVSDIVVGEGTELTWIILQQQGG 225
Query: 283 NAAHI 287
H+
Sbjct: 226 EDTHL 230
>gi|283782290|ref|YP_003373045.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
gi|283440743|gb|ADB19185.1| FeS assembly protein SufB [Pirellula staleyi DSM 6068]
Length = 471
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IY+P G K++ P+ Y + + G + R +++V+EG V +E
Sbjct: 192 IYIPKGVKIDFPMQAYFRINAERMGQFE---------RTLIIVDEGASVHYVEGCTAPMY 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ ++V+E+++ +GG+ R++ +QN + N
Sbjct: 243 SSESLHSAVVEILVKRGGRCRYTTIQNWANN 273
>gi|409386299|ref|ZP_11238721.1| Iron-sulfur cluster assembly protein SufB [Lactococcus
raffinolactis 4877]
gi|399206397|emb|CCK19636.1| Iron-sulfur cluster assembly protein SufB [Lactococcus
raffinolactis 4877]
Length = 472
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N + R +++V+EG V +E N
Sbjct: 193 IYVPKGIKVDIPL-QTYFRINNENTGQFE------RTLIVVDEGASVHYVEGCTAPTYNS 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQL 295
+V+E+ G VR+S +QN S N ++ R L
Sbjct: 246 NSLHAAVVEIFALDGAYVRYSTIQNWSDNVYNLVTKRARAL 286
>gi|291295169|ref|YP_003506567.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
gi|290470128|gb|ADD27547.1| FeS assembly protein SufD [Meiothermus ruber DSM 1279]
Length = 444
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 50 IQLAESL-EDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSS 108
++L SL D + S L +P LQ R + +T + P+P+ + E +++TD + +
Sbjct: 1 MELTSSLSRDLVLEVSKKLNEPQWLQTKRLEAWETFVKLPYPTTRTEEWKYTDITEVPFE 60
Query: 109 QIQPITRPSSSL--------DVSTDAQFPSLVLIDGFIQNSALNLSNLPD-----GVYVG 155
++ P+ P D AQ + G + L LP+ GV
Sbjct: 61 EL-PLELPKGGASEIPQAVQDRLAQAQLSGYAVFVG----ADLVHVELPEEYRQQGVIFT 115
Query: 156 SLLG--------VSDGIMKRVS--DFISEFQCGDLFWSINGMGAPDL--GV-IYVPAGCK 202
SL V + K V+ D + + I + A GV +Y+P +
Sbjct: 116 SLHQAIAQHPELVEANLFKAVNWHDLVGTQKNRPENSKIPALNAALFTHGVFLYIPKNVE 175
Query: 203 VENPI-YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSV 261
PI KYL EGG +S R +++ + + IEE++ S
Sbjct: 176 FSKPIGVFKYL--EGGR-------LSGSRTLIVGDVNSQAVYIEEYISPARVAPSVNTSS 226
Query: 262 LEVVIGKGGKVRHSYLQ 278
E+++G G KVRH+++Q
Sbjct: 227 TEIIVGPGAKVRHAHIQ 243
>gi|444431871|ref|ZP_21227032.1| iron-sulfur cluster assembly protein SufB [Gordonia soli NBRC
108243]
gi|443887270|dbj|GAC68753.1| iron-sulfur cluster assembly protein SufB [Gordonia soli NBRC
108243]
Length = 487
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 208 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 260
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG+ R++ +QN S N
Sbjct: 261 DSLHSAVVEIVVKKGGRCRYTTIQNWSNN 289
>gi|48478184|ref|YP_023890.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
gi|48430832|gb|AAT43697.1| ABC transporter ATP-binding protein [Picrophilus torridus DSM 9790]
Length = 480
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 162 DGIMKRVSDFISEFQC------GDLFWSINGMGAPDLGVIYVPAGCKVENPI--YLKYLS 213
D +++ D + E+ C + F ++NG +YVP G K++ P+ Y +
Sbjct: 160 DTAVQKYPDLVKEYYCRAIPPSDNKFAALNGAVWSGGSFLYVPKGVKIDMPLQTYFRLNG 219
Query: 214 VEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVR 273
+ G + +V+ +EG +V IE + +++E+ K +V+
Sbjct: 220 EQSGQFE---------HTIVIADEGAKVHYIEGCTAPKYETNSLHTAIVEIYAHKNSEVK 270
Query: 274 HSYLQNQS 281
++ +QN S
Sbjct: 271 YTSVQNWS 278
>gi|424913816|ref|ZP_18337180.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392849992|gb|EJB02513.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 424
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 29/227 (12%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDA 126
LP + LRD L P+R+ E + +TD + T P D +DA
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLR------TLPPQVGDAGSDA 80
Query: 127 QFPSLVLIDG-----FIQNSALNLSNLPDGVYVGSLLGVSDGIMK-RVSDFISEFQCGDL 180
P L+DG IQ A + DG+ V + S+ ++ +D + D
Sbjct: 81 LEP---LVDGSTVLAVIQGHA-SQKAATDGLGVSAY---SEHLLDGSAADGLDALGSDDA 133
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 134 VGRINGSFVRDGYVVDVPADTELDAPLEIQF--VHAGGQTHTRLPVA-------FASGVK 184
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE + G D + V ++ +G+G ++ LQ H+
Sbjct: 185 ATVIERHLAVTG-DPALVSHVSDITVGEGAELTWIILQQHGAEDTHL 230
>gi|149196445|ref|ZP_01873500.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
gi|149140706|gb|EDM29104.1| FeS assembly protein SufD [Lentisphaera araneosa HTCC2155]
Length = 434
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 13/216 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQFP--- 129
L R S + + +P R +E +++T + Q + + S +V +
Sbjct: 22 LGDFRKSHASKVSELEFPGRHNERWKYTPLRAVLELDYQVAQQVNVSDEVLASHRLQGSI 81
Query: 130 SLVLIDGFIQNSALNL-SNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG---DLFWSIN 185
LV I+G NL +LP G V + + + I E++ D+F ++N
Sbjct: 82 ELVFINGSFSEELSNLPVDLPKGFSVVPVSQALNSDLAHDVQNILEYEVSEEEDVFETLN 141
Query: 186 GMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
D I V G E I++ S +++ ++ R ++ +EEG +IE
Sbjct: 142 KSSFRDGAFIKVAKGAYSETAIHILNFS------SAEQSAVNFSRHLIYLEEGALATVIE 195
Query: 246 EFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQS 281
++G N + ++V+ + + +S LQN+S
Sbjct: 196 TCADRDGEVKKINNIMTDIVLQERSVLTYSRLQNES 231
>gi|163814490|ref|ZP_02205879.1| hypothetical protein COPEUT_00641 [Coprococcus eutactus ATCC 27759]
gi|158450125|gb|EDP27120.1| FeS assembly protein SufB [Coprococcus eutactus ATCC 27759]
gi|295094612|emb|CBK83703.1| Iron-regulated ABC transporter membrane component SufB [Coprococcus
sp. ART55/1]
Length = 468
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
+YVP G KVE P+ Y + + G + +++V+EG ++ IE +
Sbjct: 189 VYVPPGVKVEIPLQSYFRLNAAGAGQFE---------HTLIIVDEGADLHFIEGCSAPKY 239
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
N +E+ +GK K+R+S ++N S N ++ R
Sbjct: 240 NVANLHAGCVELFVGKNAKLRYSTIENWSKNMYNLNTKRAR 280
>gi|429086287|ref|ZP_19149019.1| Iron-sulfur cluster assembly protein SufB [Cronobacter universalis
NCTC 9529]
gi|426506090|emb|CCK14131.1| Iron-sulfur cluster assembly protein SufB [Cronobacter universalis
NCTC 9529]
Length = 496
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|375095927|ref|ZP_09742192.1| FeS assembly protein SufB [Saccharomonospora marina XMU15]
gi|374656660|gb|EHR51493.1| FeS assembly protein SufB [Saccharomonospora marina XMU15]
Length = 486
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 260 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 288
>gi|325002896|ref|ZP_08124008.1| FeS assembly protein SufB [Pseudonocardia sp. P1]
Length = 472
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 193 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 245
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+V+ KGG+ R++ +QN S N ++
Sbjct: 246 DSLHSAVVEIVVKKGGRCRYTTIQNWSNNVYNL 278
>gi|254786626|ref|YP_003074055.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
gi|237684877|gb|ACR12141.1| FeS assembly protein SufD [Teredinibacter turnerae T7901]
Length = 440
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMI-------KSSQIQPITRPSSSLDVSTD 125
L + +L P RK E +++T ++ +S+Q P S
Sbjct: 20 LAAVNQQGRNNVLGFTQPGRKTEAWKYTSLRVLDDGRFLEQSNQASPDAAVWDSAHQIEG 79
Query: 126 AQFPSLVLIDG-FIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGD-LFWS 183
LV ++G + + + L LPDGV + + +S ++ G+ F++
Sbjct: 80 LDALKLVFVNGVYCADLSSELEGLPDGVELTPFSLATAEQQASISCALNSAVVGEKHFFA 139
Query: 184 INGMGAPDLGV-IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
+ + GV + V A + PI + +L E S L RV+V + E +
Sbjct: 140 VANSAQVNEGVYLKVRANTLLLTPIQILHLHSESEQQQSAVL-----RVLVDMGESSQAT 194
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE+F G +G + NS+ E ++G K + L ++ HI
Sbjct: 195 LIEQFAGGDGVANVFVNSLNEFLVGDNAKFDYYRLNLEAETVPHI 239
>gi|262202310|ref|YP_003273518.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
gi|262085657|gb|ACY21625.1| FeS assembly protein SufB [Gordonia bronchialis DSM 43247]
Length = 485
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG+ R++ +QN S N
Sbjct: 259 DSLHSAVVEIVVKKGGRCRYTTIQNWSNN 287
>gi|402843442|ref|ZP_10891837.1| FeS assembly protein SufB [Klebsiella sp. OBRC7]
gi|402276860|gb|EJU25955.1| FeS assembly protein SufB [Klebsiella sp. OBRC7]
Length = 495
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|423103455|ref|ZP_17091157.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5242]
gi|376386119|gb|EHS98836.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5242]
Length = 495
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|423108794|ref|ZP_17096489.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5243]
gi|423114814|ref|ZP_17102505.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5245]
gi|376382988|gb|EHS95716.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5243]
gi|376383689|gb|EHS96416.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5245]
Length = 495
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|349685693|ref|ZP_08896835.1| iron-sulfur (Fe-S) cluster assembly protein [Gluconacetobacter
oboediens 174Bp2]
Length = 424
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVS---DGIMKRVSDFISEFQCGDLFW 182
A +V ++G+ + S LP GV + +L + DGI GD+
Sbjct: 86 AAASRVVFVNGYFD---VGRSRLPTGVKISTLAAGTLPDDGIDP----------AGDVTT 132
Query: 183 SINGMGAPDLGVIYVP----AGCKVENPIYLKYLSVEGGNVDSKKLPIS-NPRVVVLVEE 237
++N + A D + VP AGC L +S+ + + P+S +PR ++VE
Sbjct: 133 ALNTVLARDGLELVVPEGVDAGC-------LLLVSI---GMTQEAAPVSFHPRHRIVVET 182
Query: 238 GGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
GG + +++ VG+ Y N + ++ + + G + H+ +Q + A H+ + R
Sbjct: 183 GGRLALLDASVGR---GQYLHNPLYDIAVAQQGYLSHARIQAEGKQAVHLAVSHAR 235
>gi|213649930|ref|ZP_03379983.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
Length = 347
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|37526512|ref|NP_929856.1| cysteine desulfurase activator complex subunit SufB [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36785943|emb|CAE14995.1| SufB protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 498
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|357588630|ref|ZP_09127296.1| Fe-S cluster assembly ABC transporter permease [Corynebacterium
nuruki S6-4]
Length = 493
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G VE P+ Y + N+ + R +++V+EG V +E
Sbjct: 214 VYVPKGVHVEIPLQ-AYFRINTENMGQFE------RTLIIVDEGAFVHYVEGCTAPIYQS 266
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++++E+++ KGG+ R++ +QN S N
Sbjct: 267 DSLHSAIVEIIVKKGGRCRYTTIQNWSNN 295
>gi|375261344|ref|YP_005020514.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
oxytoca KCTC 1686]
gi|397658436|ref|YP_006499138.1| iron-sulfur cluster assembly protein SufB [Klebsiella oxytoca E718]
gi|365910822|gb|AEX06275.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
oxytoca KCTC 1686]
gi|394346737|gb|AFN32858.1| Iron-sulfur cluster assembly protein SufB [Klebsiella oxytoca E718]
Length = 495
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|358447747|ref|ZP_09158263.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
gi|385332727|ref|YP_005886678.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|311695877|gb|ADP98750.1| FeS assembly protein SufD [Marinobacter adhaerens HP15]
gi|357228100|gb|EHJ06549.1| FeS assembly protein SufD [Marinobacter manganoxydans MnI7-9]
Length = 428
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 20/241 (8%)
Query: 60 LPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSS 119
L + SLP+PL LR L+ P P+RK E ++++ + +K + I+ P+
Sbjct: 12 LHPAGQSLPEPLL--ALRKQRGTALVDMPLPTRKTENWKYS-SKYLKLTDDMAISLPA-- 66
Query: 120 LDVSTDAQFP----SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
D T + + ++G + A +L DG+ + S +SD ++D +
Sbjct: 67 -DGKTGSGLAVPGYKVAFLNGVMMPEACEYPDL-DGISIKSFGDLSDEEASDLADRLDST 124
Query: 176 QCGDL--FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVV 233
+N D +I + ++ P+++ + V ++ + PR+ V
Sbjct: 125 LDNKAVQMARLNSARFEDGLLIRLKPDAVLDQPLFIVH------EVTAEASGSAFPRIFV 178
Query: 234 LVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
++ ++EE++ G+ N+V E + G + L + N HI T V
Sbjct: 179 DAGRHSQITLVEEYISS-GSAQVMVNTVTEFNVADGANITSIRLNMEGENVQHIGSTGVL 237
Query: 294 Q 294
Q
Sbjct: 238 Q 238
>gi|190891949|ref|YP_001978491.1| Fe-S cluster assembly ABC transporter permease [Rhizobium etli CIAT
652]
gi|190697228|gb|ACE91313.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli CIAT 652]
Length = 424
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR--PSSSLDV 122
LP + LRD L P+R+ E + +TD + + R PS + D
Sbjct: 25 GDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTD--------FKNLLRGLPSQAGDA 76
Query: 123 STDAQFP----SLVL--IDGFIQNSA----LNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
+D P S+VL I G A L +S + + GS G D +
Sbjct: 77 GSDPLEPLVAGSMVLAVIQGHANQKAAAEGLGVSAYSESLRDGSAAGGLDAL-------- 128
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D ING D V+ VP +E+P+ +++ + G +LP+S
Sbjct: 129 ---GGDDAVGRINGSFVRDGYVVDVPDNTDLEDPLEIQF--IHAGGQTHTRLPVS----- 178
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G + +IE G D + + + ++ +GKG ++ LQ Q + H+
Sbjct: 179 --FGAGVQATVIERHRAVTG-DAAFVSHISDITVGKGTELTWIILQQQGADDTHL 230
>gi|403731088|ref|ZP_10949215.1| iron-sulfur cluster assembly protein SufB [Gordonia rhizosphera
NBRC 16068]
gi|403202319|dbj|GAB93546.1| iron-sulfur cluster assembly protein SufB [Gordonia rhizosphera
NBRC 16068]
Length = 483
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 204 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 256
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 257 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 285
>gi|385674958|ref|ZP_10048886.1| Iron-regulated ABC transporter membrane component SufB
[Amycolatopsis sp. ATCC 39116]
Length = 482
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 284
>gi|383827762|ref|ZP_09982851.1| FeS assembly protein SufB [Saccharomonospora xinjiangensis XJ-54]
gi|383460415|gb|EID52505.1| FeS assembly protein SufB [Saccharomonospora xinjiangensis XJ-54]
Length = 482
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 284
>gi|384565698|ref|ZP_10012802.1| FeS assembly protein SufB [Saccharomonospora glauca K62]
gi|384521552|gb|EIE98747.1| FeS assembly protein SufB [Saccharomonospora glauca K62]
Length = 482
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 284
>gi|375100269|ref|ZP_09746532.1| FeS assembly protein SufB [Saccharomonospora cyanea NA-134]
gi|374661001|gb|EHR60879.1| FeS assembly protein SufB [Saccharomonospora cyanea NA-134]
Length = 482
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYQS 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 284
>gi|291299940|ref|YP_003511218.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
gi|290569160|gb|ADD42125.1| FeS assembly protein SufB [Stackebrandtia nassauensis DSM 44728]
Length = 477
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E +
Sbjct: 198 IYVPKGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYSS 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 279
>gi|377570782|ref|ZP_09799915.1| iron-sulfur cluster assembly protein SufB [Gordonia terrae NBRC
100016]
gi|377532003|dbj|GAB45080.1| iron-sulfur cluster assembly protein SufB [Gordonia terrae NBRC
100016]
Length = 482
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 284
>gi|421919152|ref|ZP_16348660.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|410118549|emb|CCM91285.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
Length = 495
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|443673146|ref|ZP_21138217.1| Iron-regulated ABC transporter membrane component SufB [Rhodococcus
sp. AW25M09]
gi|443414307|emb|CCQ16555.1| Iron-regulated ABC transporter membrane component SufB [Rhodococcus
sp. AW25M09]
Length = 481
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYIPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG+ R++ +QN S N ++
Sbjct: 255 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 287
>gi|429093378|ref|ZP_19155974.1| Iron-sulfur cluster assembly protein SufB [Cronobacter dublinensis
1210]
gi|426741790|emb|CCJ82087.1| Iron-sulfur cluster assembly protein SufB [Cronobacter dublinensis
1210]
Length = 496
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|377575889|ref|ZP_09804873.1| iron-sulfur cluster assembly protein SufB [Escherichia hermannii
NBRC 105704]
gi|377541921|dbj|GAB50038.1| iron-sulfur cluster assembly protein SufB [Escherichia hermannii
NBRC 105704]
Length = 494
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IY+P G C +E Y + + + G + R +++ +
Sbjct: 192 NFFAALNAAVASDGTFIYIPKGVRCPMELSTYFRINAEKTGQFE---------RTILIAD 242
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 243 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 285
>gi|268592596|ref|ZP_06126817.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
gi|291312010|gb|EFE52463.1| FeS assembly protein SufB [Providencia rettgeri DSM 1131]
Length = 499
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVHCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|429096041|ref|ZP_19158147.1| Iron-sulfur cluster assembly protein SufB [Cronobacter dublinensis
582]
gi|426282381|emb|CCJ84260.1| Iron-sulfur cluster assembly protein SufB [Cronobacter dublinensis
582]
Length = 496
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|333919571|ref|YP_004493152.1| hypothetical protein AS9A_1903 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481792|gb|AEF40352.1| hypothetical protein AS9A_1903 [Amycolicicoccus subflavus DQS3-9A1]
Length = 484
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V+ KGG+ R++ +QN S N
Sbjct: 258 DSLHSAVVEIVVKKGGRCRYTTIQNWSNN 286
>gi|311031782|ref|ZP_07709872.1| FeS assembly protein SufB [Bacillus sp. m3-13]
Length = 465
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E++I K R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIIKKDAYCRYTTIQNWANNVYNL 271
>gi|408369389|ref|ZP_11167170.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
gi|407745135|gb|EKF56701.1| FeS assembly protein SufD [Galbibacter sp. ck-I2-15]
Length = 438
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 30/257 (11%)
Query: 56 LEDSLPSSSSSLPQPL----PLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQ 111
L+D L SS + + + +R + + +P++KDE +++T + + +
Sbjct: 3 LKDKLISSFMAFENRVDVNHAVHDIRTQAIKVFEEKGFPTKKDEAWKYTSLNALLKNDYS 62
Query: 112 PITRPSSSLDVST-------DAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGI 164
SS++ + D +V IDG S+L + + G +
Sbjct: 63 VFPEQESSIEFNDIKKYFIHDIDSYRIVFIDGVFS------SHLSETTHEGIDVCTMGAA 116
Query: 165 MKR------VSDFISEF-QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGG 217
+ + + ++ ++ D ++N + + I VP G V+ PI + Y S
Sbjct: 117 LTKPKYQLVIENYFNKIVDKEDSLTALNTAFSREGAFINVPKGKVVQKPIQVLYFST--- 173
Query: 218 NVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYL 277
+ + PR +V+V E V IIE N N+V E+ K G V + +
Sbjct: 174 --GKESAQMVQPRNLVVVGENAYVQIIERHQSLNLNPV-LTNAVTEIHTSKRGIVDYYKI 230
Query: 278 QNQSLNAAHIKWTAVRQ 294
QN +A+ I T + Q
Sbjct: 231 QNDQESASLIDNTYISQ 247
>gi|345298947|ref|YP_004828305.1| FeS assembly protein SufB [Enterobacter asburiae LF7a]
gi|345092884|gb|AEN64520.1| FeS assembly protein SufB [Enterobacter asburiae LF7a]
Length = 496
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILIAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|325293224|ref|YP_004279088.1| iron-sulfur cluster assembly protein [Agrobacterium sp. H13-3]
gi|325061077|gb|ADY64768.1| putative iron-sulfur cluster assembly protein [Agrobacterium sp.
H13-3]
Length = 423
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 32/240 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS---SQI 110
+L D+ + S LP + RD L + P+R+ E + +TD S++++ Q
Sbjct: 15 ALIDAYTAKFSELPGNGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRAIPEDQP 74
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKR 167
P+ +S+ + ++ + N+ + D + SLL DG
Sbjct: 75 APVIEKQASVVAGSSV---------AYVLHGTANVGKIEDISVSSFAESLL---DG---S 119
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ ++E D+ ING D ++ +PA ++E PI L+ ++ G + P+
Sbjct: 120 AATGLAEASKDDVIGRINGSFVRDGLMLDIPADAEIEKPIELQ--AIHGAGQVHSRFPVR 177
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ G + +IE + +D +SV ++V+ G +V LQ Q H+
Sbjct: 178 FGK-------GSKATVIERHLSVT-SDAALVSSVTDIVVEDGAEVTWIILQQQGAADIHL 229
>gi|398817436|ref|ZP_10576057.1| FeS assembly protein SufD [Brevibacillus sp. BC25]
gi|398030152|gb|EJL23582.1| FeS assembly protein SufD [Brevibacillus sp. BC25]
Length = 432
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP +V+ P+ Y + G N + P V+++ E +V ++ +V EG
Sbjct: 157 LYVPKNVEVDVPLQTVY-EIAGDN------ALLAPHVLIVAEANSKVTYVDTYVSGEGKS 209
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
ANSV+EV +G G V+ + +++ S++
Sbjct: 210 MV-ANSVVEVYVGAGASVQVASVRSLSVD 237
>gi|311279427|ref|YP_003941658.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
gi|308748622|gb|ADO48374.1| FeS assembly protein SufB [Enterobacter cloacae SCF1]
Length = 495
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|156934263|ref|YP_001438179.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii ATCC BAA-894]
gi|389841249|ref|YP_006343333.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii ES15]
gi|417790451|ref|ZP_12438003.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii E899]
gi|424799366|ref|ZP_18224908.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
696]
gi|429120269|ref|ZP_19180953.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
680]
gi|449308509|ref|YP_007440865.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii SP291]
gi|156532517|gb|ABU77343.1| hypothetical protein ESA_02093 [Cronobacter sakazakii ATCC BAA-894]
gi|333955468|gb|EGL73218.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii E899]
gi|387851725|gb|AFJ99822.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii ES15]
gi|423235087|emb|CCK06778.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
696]
gi|426325335|emb|CCK11690.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
680]
gi|449098542|gb|AGE86576.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
sakazakii SP291]
Length = 496
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|429108526|ref|ZP_19170395.1| Iron-sulfur cluster assembly protein SufB [Cronobacter malonaticus
681]
gi|426295249|emb|CCJ96508.1| Iron-sulfur cluster assembly protein SufB [Cronobacter malonaticus
681]
Length = 496
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|260597664|ref|YP_003210235.1| cysteine desulfurase activator complex subunit SufB [Cronobacter
turicensis z3032]
gi|429084463|ref|ZP_19147468.1| Iron-sulfur cluster assembly protein SufB [Cronobacter condimenti
1330]
gi|429100207|ref|ZP_19162181.1| Iron-sulfur cluster assembly protein SufB [Cronobacter turicensis
564]
gi|260216841|emb|CBA30350.1| Protein sufB [Cronobacter turicensis z3032]
gi|426286856|emb|CCJ88294.1| Iron-sulfur cluster assembly protein SufB [Cronobacter turicensis
564]
gi|426546520|emb|CCJ73509.1| Iron-sulfur cluster assembly protein SufB [Cronobacter condimenti
1330]
Length = 496
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|429115290|ref|ZP_19176208.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
701]
gi|426318419|emb|CCK02321.1| Iron-sulfur cluster assembly protein SufB [Cronobacter sakazakii
701]
Length = 388
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 86 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 136
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 137 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 179
>gi|418936150|ref|ZP_13489887.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
gi|375057133|gb|EHS53320.1| FeS assembly protein SufD [Rhizobium sp. PDO1-076]
Length = 425
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 56 LEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITR 115
L D+ + SLP + RD TL P+R+ E F +TD ++ + R
Sbjct: 16 LIDAYTNQIGSLPGDGAVLLQRDGLFDTLKRQGLPTRRVESFHYTD--------LKALLR 67
Query: 116 PSSSLDVSTDAQFPSLVLIDGFI----QNSALNLSNLPDGVYVGSLL-GVSDGIMKRVSD 170
+ ++S A+ ++ + + Q A + +LP+G+ V + + DG +
Sbjct: 68 ALPADEISAVAEGVRPIVTNATVLAIRQGVAQDAGSLPEGLTVTAYRDSLKDG---SAAP 124
Query: 171 FISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPR 230
++ + D ING D + + G ++E I L+ + G L + P
Sbjct: 125 ALTAYNSEDTIGRINGAFVRDGFSLEIADGAEIEELIELQSVHAAG------HLHLRFP- 177
Query: 231 VVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+G + I+E VG+ + A V ++ +G G +V LQ + +H+
Sbjct: 178 --ATFGKGAKATIVERHVGQS-DSAALATVVADLTLGDGAEVTWVILQGEGDADSHL 231
>gi|417334102|ref|ZP_12117425.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|417391375|ref|ZP_12154576.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353576232|gb|EHC38741.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Alachua str. R6-377]
gi|353615752|gb|EHC67195.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
Length = 454
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 152 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 202
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 203 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 245
>gi|288935005|ref|YP_003439064.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|290509066|ref|ZP_06548437.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
gi|288889714|gb|ADC58032.1| FeS assembly protein SufB [Klebsiella variicola At-22]
gi|289778460|gb|EFD86457.1| FeS assembly protein SufB [Klebsiella sp. 1_1_55]
Length = 495
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|218660816|ref|ZP_03516746.1| ABC transporter involved in Fe-S cluster assembly, permease protein
[Rhizobium etli IE4771]
Length = 330
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 39/232 (16%)
Query: 67 LPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLDVSTD 125
LP + LRD L P+R+ E + +TD S++++ P + D +D
Sbjct: 27 LPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDFKSLLRA-------LPPQAGDAGSD 79
Query: 126 AQFP------SLVLIDGFIQN----SALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEF 175
P L +I G AL +S + + GS + G+ SD
Sbjct: 80 PLEPLVAGSRVLAVIQGHANQKAAAEALGVSAFSESLRDGS---AAVGLDALGSD----- 131
Query: 176 QCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLV 235
D ING D V+ VP ++ENP+ +++ + G +LP+S V
Sbjct: 132 ---DAVGRINGSFVRDGYVVDVPDDTELENPLEIQF--IHAGGQTHTRLPVSFGANV--- 183
Query: 236 EEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ +IE G D + + + ++ IGKG ++ LQ Q + H+
Sbjct: 184 ----KATVIERHRAVTG-DAAFVSHISDITIGKGTELTWIILQQQGADDTHL 230
>gi|205375194|ref|ZP_03227985.1| YurU [Bacillus coahuilensis m4-4]
Length = 467
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+EG V +E
Sbjct: 188 IYVPKGIKVETPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 240
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E++I K R++ +QN + N ++
Sbjct: 241 NSLHSAVVEIIIKKDAYCRYTTIQNWANNVYNL 273
>gi|422008413|ref|ZP_16355397.1| cysteine desulfurase activator complex subunit SufB [Providencia
rettgeri Dmel1]
gi|414094886|gb|EKT56549.1| cysteine desulfurase activator complex subunit SufB [Providencia
rettgeri Dmel1]
Length = 499
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVHCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|196230993|ref|ZP_03129853.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
gi|196224823|gb|EDY19333.1| FeS assembly protein SufB [Chthoniobacter flavus Ellin428]
Length = 470
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV++P+ Y + N + R +++ +EG EV +E +
Sbjct: 191 IYVPPGVKVKHPLQ-AYFRINAENFGQFE------RTLIIADEGSEVMYMEGCTAPKFET 243
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V KG K+++ +QN S N
Sbjct: 244 ATLHSAVVELVALKGAKIQYVTVQNWSPN 272
>gi|86148047|ref|ZP_01066349.1| cysteine desulfurase modulator [Vibrio sp. MED222]
gi|85834180|gb|EAQ52336.1| cysteine desulfurase modulator [Vibrio sp. MED222]
Length = 423
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 25/235 (10%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFT------DTSMIKSSQIQP 112
SL S +L +P QK + S LL PS + E +++T + + + Q
Sbjct: 11 SLLDSFETLVRPHEWQKKQWSK---LLGVELPSPQHEDWKYTPLDRLNELELSSAPQQST 67
Query: 113 ITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFI 172
P + + DA LV +DGF S+ V V + +S + +S I
Sbjct: 68 ANTPYNKFSLDIDAY--RLVFVDGFF---LARYSDWIPKVRVTPICAISPIEIDELSRSI 122
Query: 173 SEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVV 232
D F I A +I V A +V PIYL L + G K+ +S+ R
Sbjct: 123 KP----DAFTYITDATASSGILIEVEANTQVSKPIYL--LHINSG----KQGDVSSYRSH 172
Query: 233 VLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ V + EV +IE V +G+ S L +G G H+ + ++L+ H
Sbjct: 173 IEVADHAEVTVIEHHVS-QGSGRGVTLSRLTQHVGCGAHYHHTKIVEEALSQHHF 226
>gi|429110023|ref|ZP_19171793.1| Iron-sulfur cluster assembly protein SufB [Cronobacter malonaticus
507]
gi|426311180|emb|CCJ97906.1| Iron-sulfur cluster assembly protein SufB [Cronobacter malonaticus
507]
Length = 496
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|423120691|ref|ZP_17108375.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5246]
gi|376396192|gb|EHT08835.1| FeS cluster assembly protein sufB [Klebsiella oxytoca 10-5246]
Length = 495
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|381161255|ref|ZP_09870485.1| FeS assembly protein SufB [Saccharomonospora azurea NA-128]
gi|418462567|ref|ZP_13033614.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora azurea SZMC 14600]
gi|359736404|gb|EHK85348.1| Iron-regulated ABC transporter membrane component SufB
[Saccharomonospora azurea SZMC 14600]
gi|379253160|gb|EHY87086.1| FeS assembly protein SufB [Saccharomonospora azurea NA-128]
Length = 482
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 203 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYQS 255
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG+ R++ +QN S N ++
Sbjct: 256 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 288
>gi|262044174|ref|ZP_06017246.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259038471|gb|EEW39670.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 495
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|212712082|ref|ZP_03320210.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
gi|422018402|ref|ZP_16364959.1| cysteine desulfurase activator complex subunit SufB [Providencia
alcalifaciens Dmel2]
gi|212685604|gb|EEB45132.1| hypothetical protein PROVALCAL_03161 [Providencia alcalifaciens DSM
30120]
gi|414104694|gb|EKT66259.1| cysteine desulfurase activator complex subunit SufB [Providencia
alcalifaciens Dmel2]
Length = 499
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|86750108|ref|YP_486604.1| FeS assembly protein SufD [Rhodopseudomonas palustris HaA2]
gi|86573136|gb|ABD07693.1| Iron-regulated ABC transporter permease protein SufD
[Rhodopseudomonas palustris HaA2]
Length = 437
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 131 LVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGAP 190
LVL+DG + S +L+ L G+ + SL D D + + ++N
Sbjct: 97 LVLVDGALVPSLSDLTALEAGLSIRSLRDALDA----GDDRLLSLDNANPMTALNTALMT 152
Query: 191 DLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISN-PRVVVLVEEGGEVGIIEEFVG 249
D VI V G K P+++ +++ G P + R ++ + ++E +V
Sbjct: 153 DGVVIEVADGAKPARPLHILHIASGGA-------PAAMFTRSLISIGNNAAATVVESYVA 205
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVR 293
EG Y + + IG G ++ H L S A I VR
Sbjct: 206 SEGAGVYQVHDAAVIAIGDGARLDHVRLIEDSREAFSIAAAEVR 249
>gi|428148061|ref|ZP_18995956.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|427541995|emb|CCM92094.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 495
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|419763522|ref|ZP_14289765.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397743451|gb|EJK90666.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 426
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 124 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINTEKTGQFE---------RTILVAD 174
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 175 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 217
>gi|206578883|ref|YP_002238017.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae 342]
gi|206567941|gb|ACI09717.1| FeS assembly protein SufB [Klebsiella pneumoniae 342]
Length = 495
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|152970689|ref|YP_001335798.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|330012602|ref|ZP_08307437.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
gi|365137838|ref|ZP_09344548.1| FeS cluster assembly protein sufB [Klebsiella sp. 4_1_44FAA]
gi|378979284|ref|YP_005227425.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|419975144|ref|ZP_14490557.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419979597|ref|ZP_14494887.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419984170|ref|ZP_14499318.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419991850|ref|ZP_14506812.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419998269|ref|ZP_14513058.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420003261|ref|ZP_14517908.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420008758|ref|ZP_14523246.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420015159|ref|ZP_14529461.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420020460|ref|ZP_14534647.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420026150|ref|ZP_14540154.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420031992|ref|ZP_14545810.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420037826|ref|ZP_14551478.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420043414|ref|ZP_14556902.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420049365|ref|ZP_14562673.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420055029|ref|ZP_14568199.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420060499|ref|ZP_14573498.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420066577|ref|ZP_14579376.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420071973|ref|ZP_14584615.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420078297|ref|ZP_14590756.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420081662|ref|ZP_14593968.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908273|ref|ZP_16338121.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|424932992|ref|ZP_18351364.1| Cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425076287|ref|ZP_18479390.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425081978|ref|ZP_18485075.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425086920|ref|ZP_18490013.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428933167|ref|ZP_19006727.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae JHCK1]
gi|428941710|ref|ZP_19014744.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae VA360]
gi|150955538|gb|ABR77568.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328533761|gb|EGF60450.1| FeS assembly protein SufB [Klebsiella sp. MS 92-3]
gi|363655730|gb|EHL94537.1| FeS cluster assembly protein sufB [Klebsiella sp. 4_1_44FAA]
gi|364518695|gb|AEW61823.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|397343729|gb|EJJ36871.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397348418|gb|EJJ41518.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354687|gb|EJJ47726.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397360865|gb|EJJ53536.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397362625|gb|EJJ55273.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397370245|gb|EJJ62836.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397376802|gb|EJJ69049.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397382949|gb|EJJ75103.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397387791|gb|EJJ79798.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397395776|gb|EJJ87476.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397398895|gb|EJJ90553.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397405065|gb|EJJ96544.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397413298|gb|EJK04515.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397414188|gb|EJK05390.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397422294|gb|EJK13271.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397429465|gb|EJK20179.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397433548|gb|EJK24195.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397439735|gb|EJK30168.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397445062|gb|EJK35317.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397453007|gb|EJK43071.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|405591996|gb|EKB65448.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601204|gb|EKB74358.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405603644|gb|EKB76765.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|407807179|gb|EKF78430.1| Cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410117837|emb|CCM80746.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|426299974|gb|EKV62281.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae VA360]
gi|426305869|gb|EKV67982.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae JHCK1]
Length = 495
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|427660699|ref|ZP_18956187.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
gi|414054920|gb|EKT36846.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm11]
Length = 495
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTIQN 286
>gi|444351861|ref|YP_007388005.1| Iron-sulfur cluster assembly protein SufB [Enterobacter aerogenes
EA1509E]
gi|443902691|emb|CCG30465.1| Iron-sulfur cluster assembly protein SufB [Enterobacter aerogenes
EA1509E]
Length = 495
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|354723200|ref|ZP_09037415.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
mori LMG 25706]
Length = 496
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|336249906|ref|YP_004593616.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
aerogenes KCTC 2190]
gi|334735962|gb|AEG98337.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
aerogenes KCTC 2190]
Length = 495
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|238895190|ref|YP_002919925.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|238547507|dbj|BAH63858.1| Fe-S cluster assembly protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 495
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|340344356|ref|ZP_08667488.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519497|gb|EGP93220.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 466
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G KV+ P+ Y + N+ + R +++ +EG EV IE +
Sbjct: 187 IYIPPGVKVDMPL-QAYFRINAENIGQFE------RTLIIADEGSEVHYIEGCTAPVYSS 239
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQS 281
++V+E+V K K+R++ +QN S
Sbjct: 240 ESLHSAVVELVAHKDAKLRYTTIQNWS 266
>gi|292488153|ref|YP_003531034.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
gi|292899363|ref|YP_003538732.1| SufB-SufC-SufD cysteine desulfurase (SufS) activator complex
protein [Erwinia amylovora ATCC 49946]
gi|428785090|ref|ZP_19002581.1| FeS assembly protein SufB [Erwinia amylovora ACW56400]
gi|291199211|emb|CBJ46326.1| component of SufB-SufC-SufD cysteine desulfurase (SufS) activator
complex [Erwinia amylovora ATCC 49946]
gi|291553581|emb|CBA20626.1| FeS assembly protein SufB [Erwinia amylovora CFBP1430]
gi|426276652|gb|EKV54379.1| FeS assembly protein SufB [Erwinia amylovora ACW56400]
Length = 497
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 195 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 245
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 246 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQN 288
>gi|449053646|ref|ZP_21732560.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae hvKP1]
gi|448875615|gb|EMB10627.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae hvKP1]
Length = 495
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|425091952|ref|ZP_18495037.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405613011|gb|EKB85762.1| FeS cluster assembly protein sufB [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 495
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|402780356|ref|YP_006635902.1| iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|402541262|gb|AFQ65411.1| Iron-sulfur cluster assembly protein SufB [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 495
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|283785087|ref|YP_003364952.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
gi|282948541|emb|CBG88131.1| component of SufB-SufC-SufD cysteine desulfurase activator complex
[Citrobacter rodentium ICC168]
Length = 495
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|424895175|ref|ZP_18318749.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393179402|gb|EJC79441.1| FeS assembly protein SufD [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 424
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 65 SSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKSSQIQPITRPSSSLD-V 122
LP + LRD L P+R+ E + +TD +++++ Q S +L+ +
Sbjct: 25 GDLPGNGAVTALRDRLLDDLKQAGLPTRRIEAWHYTDLKNLLRTVPPQAGDAGSEALEPL 84
Query: 123 STDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFW 182
D++ L +I G N +L Y LL DG ++ + D
Sbjct: 85 VADSEV--LAVIQGH-SNQKAAAGDLGVSAYSERLL---DG---SAAEGLDALGSDDAVG 135
Query: 183 SINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVG 242
ING D V+ VPA +++ P+ +++ V G +LP++ G +
Sbjct: 136 RINGSFVRDGYVVDVPADTELDGPLEIQF--VHAGGQAHTRLPVA-------FGAGVKAT 186
Query: 243 IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+IE + G D + V ++ +G+G ++ LQ Q + H+
Sbjct: 187 VIERHLAVTG-DAALVSHVSDITVGEGAELTWIILQQQGGDDTHL 230
>gi|386857682|ref|YP_006261859.1| FeS assembly protein SufD [Deinococcus gobiensis I-0]
gi|380001211|gb|AFD26401.1| FeS assembly protein SufD [Deinococcus gobiensis I-0]
Length = 418
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G +VE P+ + + G + R +V+ EE +V I+E +E
Sbjct: 141 VYVPRGVEVELPLGSFRVMSDAGT-------YTATRTLVVAEENAQVTFIDEQDSEELPG 193
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIK 288
Y +V E+V+ G ++R+ +QN HI+
Sbjct: 194 TYAIGAV-ELVVKDGARLRYVSIQNWGKGVTHIQ 226
>gi|407646718|ref|YP_006810477.1| FeS assembly protein SufB [Nocardia brasiliensis ATCC 700358]
gi|407309602|gb|AFU03503.1| FeS assembly protein SufB [Nocardia brasiliensis ATCC 700358]
Length = 478
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 280
>gi|422022556|ref|ZP_16369063.1| cysteine desulfurase activator complex subunit SufB [Providencia
sneebia DSM 19967]
gi|414095726|gb|EKT57386.1| cysteine desulfurase activator complex subunit SufB [Providencia
sneebia DSM 19967]
Length = 499
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYIPKGVTCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|62179960|ref|YP_216377.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|224584118|ref|YP_002637916.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375114281|ref|ZP_09759451.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
gi|62127593|gb|AAX65296.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224468645|gb|ACN46475.1| hypothetical protein SPC_2359 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322714427|gb|EFZ05998.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SCSA50]
Length = 495
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|392978730|ref|YP_006477318.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392324663|gb|AFM59616.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 496
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|312172291|emb|CBX80548.1| FeS assembly protein SufB [Erwinia amylovora ATCC BAA-2158]
Length = 497
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 195 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 245
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 246 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKNAEVKYSTVQN 288
>gi|401763369|ref|YP_006578376.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400174903|gb|AFP69752.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 496
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|419957357|ref|ZP_14473423.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae GS1]
gi|449471197|ref|XP_004153237.1| PREDICTED: feS cluster assembly protein SufB-like [Cucumis sativus]
gi|295096075|emb|CBK85165.1| Iron-regulated ABC transporter membrane component SufB
[Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|388607515|gb|EIM36719.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae GS1]
Length = 496
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|296102715|ref|YP_003612861.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057174|gb|ADF61912.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 496
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|168240879|ref|ZP_02665811.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194448024|ref|YP_002045375.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|386591220|ref|YP_006087620.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|419729101|ref|ZP_14256062.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|419734486|ref|ZP_14261376.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|419737529|ref|ZP_14264319.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|419744962|ref|ZP_14271608.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|419749245|ref|ZP_14275730.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|421570813|ref|ZP_16016498.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|421573852|ref|ZP_16019483.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|421580680|ref|ZP_16026234.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|421586536|ref|ZP_16032017.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
gi|194406328|gb|ACF66547.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339115|gb|EDZ25879.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|381297339|gb|EIC38431.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41563]
gi|381297804|gb|EIC38890.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41579]
gi|381304883|gb|EIC45838.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41573]
gi|381307169|gb|EIC48033.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41566]
gi|381311735|gb|EIC52546.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str. 41565]
gi|383798264|gb|AFH45346.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|402519175|gb|EJW26538.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00326]
gi|402523393|gb|EJW30711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00322]
gi|402526631|gb|EJW33902.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00325]
gi|402527935|gb|EJW35193.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Heidelberg str.
CFSAN00328]
Length = 495
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|453382238|dbj|GAC83269.1| iron-sulfur cluster assembly protein SufB [Gordonia paraffinivorans
NBRC 108238]
Length = 484
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 286
>gi|253989388|ref|YP_003040744.1| SUF system FeS cluster assembly, SufB [Photorhabdus asymbiotica]
gi|253780838|emb|CAQ84000.1| SUF system FeS cluster assembly, SufB [Photorhabdus asymbiotica]
Length = 492
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 190 NFFAALNSAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 240
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 241 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 283
>gi|261339557|ref|ZP_05967415.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
gi|288318374|gb|EFC57312.1| FeS assembly protein SufB [Enterobacter cancerogenus ATCC 35316]
Length = 496
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|359767043|ref|ZP_09270837.1| iron-sulfur cluster assembly protein SufB [Gordonia
polyisoprenivorans NBRC 16320]
gi|378717806|ref|YP_005282695.1| FeS assembly protein SufB [Gordonia polyisoprenivorans VH2]
gi|359315671|dbj|GAB23670.1| iron-sulfur cluster assembly protein SufB [Gordonia
polyisoprenivorans NBRC 16320]
gi|375752509|gb|AFA73329.1| FeS assembly protein SufB [Gordonia polyisoprenivorans VH2]
Length = 490
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 211 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 263
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 264 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 292
>gi|401676080|ref|ZP_10808066.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
sp. SST3]
gi|400216566|gb|EJO47466.1| cysteine desulfurase activator complex subunit SufB [Enterobacter
sp. SST3]
Length = 496
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|386035274|ref|YP_005955187.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae KCTC 2242]
gi|424831071|ref|ZP_18255799.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|339762402|gb|AEJ98622.1| cysteine desulfurase activator complex subunit SufB [Klebsiella
pneumoniae KCTC 2242]
gi|414708504|emb|CCN30208.1| FeS assembly protein SufB [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
Length = 495
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|257125281|ref|YP_003163395.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
gi|257049220|gb|ACV38404.1| FeS assembly protein SufB [Leptotrichia buccalis C-1013-b]
Length = 473
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G KV+ P+ Y + + E G + +++V+EG ++ IE +
Sbjct: 194 IYVPKGVKVKMPLQSYFRLNAPEAGQFE---------HTLIIVDEGADLHFIEGCSAPKY 244
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+E+++ KG ++R+S ++N S N
Sbjct: 245 KKNVLHAGAVELIVKKGARLRYSTIENWSRN 275
>gi|417511242|ref|ZP_12175909.1| Iron-sulfur cluster assembly protein SufB, partial [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
gi|353643645|gb|EHC87791.1| Iron-sulfur cluster assembly protein SufB, partial [Salmonella
enterica subsp. enterica serovar Senftenberg str.
A4-543]
Length = 480
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 178 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 228
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 229 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 271
>gi|29141702|ref|NP_805044.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213053496|ref|ZP_03346374.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428572|ref|ZP_03361322.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213581033|ref|ZP_03362859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213852802|ref|ZP_03382334.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|378959404|ref|YP_005216890.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
gi|29137330|gb|AAO68893.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|374353276|gb|AEZ45037.1| Cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. P-stx-12]
Length = 495
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|423139793|ref|ZP_17127431.1| FeS assembly protein SufB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052347|gb|EHY70238.1| FeS assembly protein SufB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 495
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|377563231|ref|ZP_09792582.1| iron-sulfur cluster assembly protein SufB [Gordonia sputi NBRC
100414]
gi|377529479|dbj|GAB37747.1| iron-sulfur cluster assembly protein SufB [Gordonia sputi NBRC
100414]
Length = 477
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 279
>gi|365902103|ref|ZP_09439926.1| ABC transporter component, iron regulated () [Lactobacillus
malefermentans KCTC 3548]
Length = 468
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVPAG + + PI Y + S G + R +++VEEG V +E
Sbjct: 189 IYVPAGVETKTPIQSYFRLNSENSGQFE---------RTLIIVEEGARVDYVEGCTAPNY 239
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+EV + K R++ +QN S N
Sbjct: 240 SSDSLHAAVVEVNVEKDAYCRYTTIQNWSDN 270
>gi|334122244|ref|ZP_08496285.1| FeS assembly protein SufB [Enterobacter hormaechei ATCC 49162]
gi|333392355|gb|EGK63459.1| FeS assembly protein SufB [Enterobacter hormaechei ATCC 49162]
Length = 496
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|393796445|ref|ZP_10379809.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia BG20]
Length = 466
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G KV+ P+ Y + N+ + R +++ +EG EV IE +
Sbjct: 187 IYIPPGVKVDMPL-QAYFRINAENIGQFE------RTLIIADEGSEVHYIEGCTAPVYSS 239
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQS 281
++V+E+V K K+R++ +QN S
Sbjct: 240 ESLHSAVVELVAHKDAKLRYTTIQNWS 266
>gi|418408554|ref|ZP_12981870.1| iron-sulfur cluster assembly protein [Agrobacterium tumefaciens 5A]
gi|358005468|gb|EHJ97794.1| iron-sulfur cluster assembly protein [Agrobacterium tumefaciens 5A]
Length = 423
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 32/240 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS---SQI 110
+L D+ + S LP + RD L + P+R+ E + +TD S++++ Q
Sbjct: 15 ALIDAYTAKFSELPGNGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRAIPEDQP 74
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKR 167
P+ +S+ + ++ + N+ + D + SLL DG
Sbjct: 75 APVIEKQASVVAGSSV---------AYVLHGTANVGKIEDISVSSFAESLL---DG---S 119
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ ++E D+ ING D + +PA ++E PI L+ ++ G + P+
Sbjct: 120 AATGLAEASKDDVIGRINGSFVRDGLTLDIPADAEIEKPIELQ--AIHGAGQVHSRFPVR 177
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ G + +IE + +D +SV ++V+ G +V LQ Q H+
Sbjct: 178 FGK-------GSKATVIERHLSVT-SDAALVSSVTDIVVEDGAEVTWIILQQQGAADIHL 229
>gi|294503593|ref|YP_003567655.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
gi|294354052|gb|ADE64393.1| hypothetical protein YPZ3_1483 [Yersinia pestis Z176003]
Length = 475
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 173 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 223
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 224 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQN 266
>gi|161503533|ref|YP_001570645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:- str.
RSK2980]
gi|160864880|gb|ABX21503.1| hypothetical protein SARI_01609 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 495
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|116492291|ref|YP_804026.1| Fe-S cluster assembly ABC-type transport system, permease component
[Pediococcus pentosaceus ATCC 25745]
gi|421894811|ref|ZP_16325295.1| FeS assembly protein SufB [Pediococcus pentosaceus IE-3]
gi|116102441|gb|ABJ67584.1| Iron-regulated ABC transporter membrane component SufB [Pediococcus
pentosaceus ATCC 25745]
gi|385272260|emb|CCG90667.1| FeS assembly protein SufB [Pediococcus pentosaceus IE-3]
Length = 469
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP + PI Y + G + R +++VE+GG V +E ++
Sbjct: 190 LYVPKNVHADIPI-QSYFRINAGRTGQFE------RTLIIVEKGGSVNYVEGCTAPNYSE 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+V+EV + K G R++ +QN S N
Sbjct: 243 DSLHAAVVEVFVKKDGYCRYTTIQNWSTN 271
>gi|359422790|ref|ZP_09213936.1| iron-sulfur cluster assembly protein SufB [Gordonia amarae NBRC
15530]
gi|358241777|dbj|GAB03518.1| iron-sulfur cluster assembly protein SufB [Gordonia amarae NBRC
15530]
Length = 478
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 280
>gi|332686996|ref|YP_004456770.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
gi|379727093|ref|YP_005319278.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
DAT561]
gi|332371005|dbj|BAK21961.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
ATCC 35311]
gi|376317996|dbj|BAL61783.1| iron-sulfur cluster assembly protein SufB [Melissococcus plutonius
DAT561]
Length = 464
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G + + PI Y + + G + R +++VEEG + +E
Sbjct: 185 IYVPKGVQTDIPIQSYFRINTENEGQFE---------RTLIIVEEGASINYVEGCSAPIY 235
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +V+EV + KGG R++ +QN S N
Sbjct: 236 STNSLHAAVVEVYVKKGGYCRYTTIQNWSTN 266
>gi|329764691|ref|ZP_08256287.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138837|gb|EGG43077.1| FeS assembly protein SufB [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 469
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IY+P G KV+ P+ Y + N+ + R +++ +EG EV IE +
Sbjct: 190 IYIPPGVKVDMPL-QAYFRINAENIGQFE------RTLIIADEGSEVHYIEGCTAPVYSS 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQS 281
++V+E+V K K+R++ +QN S
Sbjct: 243 ESLHSAVVELVAHKDAKLRYTTIQNWS 269
>gi|198244344|ref|YP_002215757.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205352910|ref|YP_002226711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207857124|ref|YP_002243775.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|375119236|ref|ZP_09764403.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|421358132|ref|ZP_15808430.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|421364602|ref|ZP_15814834.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|421366609|ref|ZP_15816811.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|421373570|ref|ZP_15823710.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|421377045|ref|ZP_15827144.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|421381545|ref|ZP_15831600.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|421385224|ref|ZP_15835246.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|421390448|ref|ZP_15840423.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|421393708|ref|ZP_15843652.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|421398246|ref|ZP_15848154.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|421404058|ref|ZP_15853902.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|421409569|ref|ZP_15859359.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|421413293|ref|ZP_15863047.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|421418604|ref|ZP_15868305.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|421422280|ref|ZP_15871948.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|421426482|ref|ZP_15876110.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|421432766|ref|ZP_15882334.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434771|ref|ZP_15884317.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|421441809|ref|ZP_15891272.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|421444627|ref|ZP_15894057.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|436627188|ref|ZP_20515176.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|436792624|ref|ZP_20521587.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|436809030|ref|ZP_20528410.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|436815214|ref|ZP_20532765.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|436844637|ref|ZP_20538395.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|436854032|ref|ZP_20543666.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|436857569|ref|ZP_20546089.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|436864743|ref|ZP_20550710.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|436873693|ref|ZP_20556417.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|436878108|ref|ZP_20558963.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|436888350|ref|ZP_20564679.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|436895866|ref|ZP_20568622.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|436901747|ref|ZP_20572657.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|436912212|ref|ZP_20578041.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|436922144|ref|ZP_20584369.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|436927118|ref|ZP_20586944.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|436936163|ref|ZP_20591603.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|436943353|ref|ZP_20596299.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|436951159|ref|ZP_20600214.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|436961516|ref|ZP_20604890.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|436970890|ref|ZP_20609283.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|436983508|ref|ZP_20614097.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|436994362|ref|ZP_20618833.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|437007089|ref|ZP_20623140.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|437024006|ref|ZP_20629215.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|437030328|ref|ZP_20631298.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|437040708|ref|ZP_20634843.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|437053963|ref|ZP_20642762.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|437058683|ref|ZP_20645530.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|437070494|ref|ZP_20651672.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|437076373|ref|ZP_20654736.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|437081264|ref|ZP_20657716.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|437091572|ref|ZP_20663172.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|437101785|ref|ZP_20666234.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|437121063|ref|ZP_20671703.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|437130978|ref|ZP_20677108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|437138729|ref|ZP_20681211.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|437145584|ref|ZP_20685491.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|437156911|ref|ZP_20692447.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|437157741|ref|ZP_20692834.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|437165958|ref|ZP_20697743.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|437180272|ref|ZP_20706040.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|437186121|ref|ZP_20709390.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|437258851|ref|ZP_20716771.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|437268421|ref|ZP_20721891.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|437277260|ref|ZP_20726779.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|437293320|ref|ZP_20732035.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|437312338|ref|ZP_20736446.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|437332493|ref|ZP_20742184.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|437343794|ref|ZP_20745962.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|437390286|ref|ZP_20751036.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|437452164|ref|ZP_20759645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|437460715|ref|ZP_20761669.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|437473502|ref|ZP_20765803.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|437499684|ref|ZP_20774108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|437514492|ref|ZP_20777855.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|437525457|ref|ZP_20779766.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|437560859|ref|ZP_20786143.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|437577802|ref|ZP_20791151.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|437594872|ref|ZP_20795789.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|437601186|ref|ZP_20797509.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|437613766|ref|ZP_20801646.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|437653856|ref|ZP_20810271.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|437663643|ref|ZP_20814080.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|437681582|ref|ZP_20818502.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|437696923|ref|ZP_20822586.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|437714933|ref|ZP_20827766.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|437733863|ref|ZP_20832108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|437764662|ref|ZP_20835047.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|437801155|ref|ZP_20838096.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|437953124|ref|ZP_20852059.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|438031410|ref|ZP_20855322.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|438088091|ref|ZP_20859552.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|438099940|ref|ZP_20863684.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|438110523|ref|ZP_20867921.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|445135136|ref|ZP_21383129.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|445142252|ref|ZP_21385938.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|445149792|ref|ZP_21389393.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|445170588|ref|ZP_21395761.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|445217153|ref|ZP_21402212.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|445223990|ref|ZP_21403489.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|445322218|ref|ZP_21412137.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|445326418|ref|ZP_21412582.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|445353038|ref|ZP_21420930.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|445357159|ref|ZP_21422079.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
gi|197938860|gb|ACH76193.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205272691|emb|CAR37605.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708927|emb|CAR33257.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326623503|gb|EGE29848.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|395984091|gb|EJH93281.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639016-6]
gi|395988436|gb|EJH97592.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
622731-39]
gi|395989264|gb|EJH98398.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
640631]
gi|395996689|gb|EJI05734.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-0424]
gi|396000667|gb|EJI09681.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-6]
gi|396001508|gb|EJI10520.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
485549-17]
gi|396014258|gb|EJI23144.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-70]
gi|396016661|gb|EJI25528.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
596866-22]
gi|396017591|gb|EJI26456.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-26]
gi|396024866|gb|EJI33650.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-50]
gi|396027138|gb|EJI35902.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
639672-46]
gi|396031319|gb|EJI40046.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629164-37]
gi|396037882|gb|EJI46526.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-2659]
gi|396040381|gb|EJI49005.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
77-1427]
gi|396041595|gb|EJI50218.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
78-1757]
gi|396048982|gb|EJI57525.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 8b-1]
gi|396053989|gb|EJI62482.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
22510-1]
gi|396059152|gb|EJI67607.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648905
5-18]
gi|396063111|gb|EJI71515.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
6-18]
gi|396067058|gb|EJI75418.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-3079]
gi|434956084|gb|ELL49857.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE30663]
gi|434962081|gb|ELL55312.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22704]
gi|434966847|gb|ELL59682.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1882]
gi|434973330|gb|ELL65718.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1884]
gi|434979223|gb|ELL71215.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1594]
gi|434982835|gb|ELL74643.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1566]
gi|434989721|gb|ELL81271.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1580]
gi|434995778|gb|ELL87094.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1543]
gi|434998450|gb|ELL89671.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1441]
gi|435008045|gb|ELL98872.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1810]
gi|435010060|gb|ELM00846.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1558]
gi|435015755|gb|ELM06281.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1018]
gi|435021181|gb|ELM11570.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1010]
gi|435024462|gb|ELM14668.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0895]
gi|435026457|gb|ELM16588.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1729]
gi|435036959|gb|ELM26778.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0899]
gi|435039001|gb|ELM28782.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1457]
gi|435043552|gb|ELM33269.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1747]
gi|435050655|gb|ELM40159.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1444]
gi|435051626|gb|ELM41128.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0968]
gi|435057179|gb|ELM46548.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1445]
gi|435064521|gb|ELM53649.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1565]
gi|435065946|gb|ELM55051.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1559]
gi|435070005|gb|ELM59004.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1808]
gi|435073813|gb|ELM62668.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1811]
gi|435082093|gb|ELM70718.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_0956]
gi|435087164|gb|ELM75681.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1455]
gi|435088977|gb|ELM77432.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1575]
gi|435090465|gb|ELM78867.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1745]
gi|435094496|gb|ELM82835.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1725]
gi|435105670|gb|ELM93707.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1791]
gi|435111883|gb|ELM99771.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CDC_2010K_1795]
gi|435112478|gb|ELN00343.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
576709]
gi|435123764|gb|ELN11255.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
635290-58]
gi|435124952|gb|ELN12408.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-19]
gi|435126141|gb|ELN13547.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-16]
gi|435132251|gb|ELN19449.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607307-2]
gi|435135518|gb|ELN22627.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
629163]
gi|435137045|gb|ELN24116.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
607308-9]
gi|435150039|gb|ELN36733.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_56-3991]
gi|435153315|gb|ELN39923.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_N202]
gi|435153621|gb|ELN40225.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SE15-1]
gi|435158995|gb|ELN45365.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_76-3618]
gi|435166098|gb|ELN52100.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_81-2490]
gi|435173446|gb|ELN58956.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL913]
gi|435174600|gb|ELN60042.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SL909]
gi|435180759|gb|ELN65864.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
CVM_69-4941]
gi|435183470|gb|ELN68445.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
638970-15]
gi|435188471|gb|ELN73184.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 17927]
gi|435191571|gb|ELN76128.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. CHS4]
gi|435200012|gb|ELN84036.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 22558]
gi|435208484|gb|ELN91893.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
40-18]
gi|435221007|gb|ELO03281.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
1-1]
gi|435223632|gb|ELO05654.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642046
4-7]
gi|435225022|gb|ELO06955.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
4-1]
gi|435229491|gb|ELO10852.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648898
4-5]
gi|435238185|gb|ELO18834.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648900
1-16]
gi|435242744|gb|ELO23048.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
1-17]
gi|435248313|gb|ELO28199.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648899
3-17]
gi|435251402|gb|ELO31024.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
39-2]
gi|435261468|gb|ELO40623.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648902
6-8]
gi|435264241|gb|ELO43173.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648903
1-6]
gi|435264759|gb|ELO43654.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435266283|gb|ELO45046.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 653049
13-19]
gi|435270910|gb|ELO49394.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 642044
8-1]
gi|435276511|gb|ELO54513.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 561362
9-7]
gi|435285696|gb|ELO63061.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 543463
42-20]
gi|435286930|gb|ELO64162.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648901
16-16]
gi|435304125|gb|ELO79930.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 33944]
gi|435305939|gb|ELO81332.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
6.0562-1]
gi|435308192|gb|ELO83187.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435317934|gb|ELO90934.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
81-2625]
gi|435325538|gb|ELO97403.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
62-1976]
gi|435327468|gb|ELO99157.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
50-5646]
gi|435331730|gb|ELP02828.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
53-407]
gi|444846386|gb|ELX71566.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9184]
gi|444849677|gb|ELX74786.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str. SL1438]
gi|444857656|gb|ELX82660.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Dublin str. HWS51]
gi|444857721|gb|ELX82722.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 20037]
gi|444862213|gb|ELX87072.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE8a]
gi|444868736|gb|ELX93351.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. SE10]
gi|444869622|gb|ELX94194.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|444873215|gb|ELX97516.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 13-1]
gi|444881599|gb|ELY05637.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. 18569]
gi|444886759|gb|ELY10504.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str. PT23]
Length = 495
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|16760537|ref|NP_456154.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|25317711|pir||AB0703 conserved hypothetical protein STY1753 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502833|emb|CAD01995.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 495
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|339999197|ref|YP_004730080.1| hypothetical protein SBG_1210 [Salmonella bongori NCTC 12419]
gi|339512558|emb|CCC30298.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 495
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|218709891|ref|YP_002417512.1| dufD protein [Vibrio splendidus LGP32]
gi|218322910|emb|CAV19087.1| hypothetical sufD protein [Vibrio splendidus LGP32]
Length = 423
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 21/233 (9%)
Query: 59 SLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIK----SSQIQPIT 114
SL S +L +P QK + S LL PS + E +++T + SS Q T
Sbjct: 11 SLLDSFETLVRPHEWQKKQWSK---LLGIELPSPQHEDWKYTSLDRLNELELSSAPQQST 67
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISE 174
+ S D LV +DGF S+ V V + +S + +S I
Sbjct: 68 ANTPYNKFSLDIDAYRLVFVDGFF---LARYSDWIPKVRVTPICALSPIEIDELSRSIKP 124
Query: 175 FQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVL 234
D F I A +I V A +V PIYL L + G K+ +S+ R +
Sbjct: 125 ----DAFTYITDATASSGILIEVEANTQVSKPIYL--LHINSG----KQGDVSSYRSHIE 174
Query: 235 VEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V + EV +IE V +G+ S L +G G H+ + ++L+ H
Sbjct: 175 VADHAEVTVIEHHVS-QGSGRGVTLSRLTQHVGCGAHYHHTKIVEEALSQHHF 226
>gi|377560563|ref|ZP_09790061.1| iron-sulfur cluster assembly protein SufB [Gordonia otitidis NBRC
100426]
gi|377522289|dbj|GAB35226.1| iron-sulfur cluster assembly protein SufB [Gordonia otitidis NBRC
100426]
Length = 477
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 279
>gi|283833346|ref|ZP_06353087.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
gi|291070987|gb|EFE09096.1| FeS assembly protein SufB [Citrobacter youngae ATCC 29220]
Length = 495
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILIAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|200389777|ref|ZP_03216388.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199602222|gb|EDZ00768.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 495
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|51596637|ref|YP_070828.1| cysteine desulfurase [Yersinia pseudotuberculosis IP 32953]
gi|170024087|ref|YP_001720592.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis YPIII]
gi|186895693|ref|YP_001872805.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis PB1/+]
gi|51589919|emb|CAH21551.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|169750621|gb|ACA68139.1| FeS assembly protein SufB [Yersinia pseudotuberculosis YPIII]
gi|186698719|gb|ACC89348.1| FeS assembly protein SufB [Yersinia pseudotuberculosis PB1/+]
Length = 503
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 201 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 251
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 252 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQN 294
>gi|417373684|ref|ZP_12143650.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
gi|353601825|gb|EHC57354.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Inverness str. R8-3668]
Length = 495
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|238782564|ref|ZP_04626595.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
gi|238716491|gb|EEQ08472.1| hypothetical protein yberc0001_22140 [Yersinia bercovieri ATCC
43970]
Length = 489
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 187 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 237
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 238 EGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQN 280
>gi|183598854|ref|ZP_02960347.1| hypothetical protein PROSTU_02286 [Providencia stuartii ATCC 25827]
gi|386745206|ref|YP_006218385.1| cysteine desulfurase activator complex subunit SufB [Providencia
stuartii MRSN 2154]
gi|188021061|gb|EDU59101.1| FeS assembly protein SufB [Providencia stuartii ATCC 25827]
gi|384481899|gb|AFH95694.1| cysteine desulfurase activator complex subunit SufB [Providencia
stuartii MRSN 2154]
Length = 499
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|168263803|ref|ZP_02685776.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205347579|gb|EDZ34210.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 495
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|441508474|ref|ZP_20990398.1| iron-sulfur cluster assembly protein SufB [Gordonia aichiensis NBRC
108223]
gi|441447502|dbj|GAC48359.1| iron-sulfur cluster assembly protein SufB [Gordonia aichiensis NBRC
108223]
Length = 477
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 198 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 250
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 251 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 279
>gi|159184935|ref|NP_354806.2| transport system [Agrobacterium fabrum str. C58]
gi|159140213|gb|AAK87591.2| transport system [Agrobacterium fabrum str. C58]
Length = 423
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 24/236 (10%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT 114
+L D+ + S LP + RD L + P+R+ E + +TD + + P
Sbjct: 15 ALIDAYTAKFSELPGNGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKTLLRAI--PDD 72
Query: 115 RPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKRVSDF 171
+P+ +D S V ++ + N+ + D + SLL DG +
Sbjct: 73 QPAPVIDKQASLVAGSPV---AYVLHGTANIGKIEDISVSSFAESLL---DGT---AATG 123
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
++E D+ ING D + +PA ++E PI L+ ++ G + P+ +
Sbjct: 124 LAEASKDDVIGRINGSFVRDGLTLDIPADAEIEKPIELQ--AIHGAGQVHSRFPVRFGK- 180
Query: 232 VVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
G + +IE + +D +SV ++V+ G +V LQ Q H+
Sbjct: 181 ------GSKATVIERHLSVT-SDAALVSSVSDIVVEDGAEVTWIILQQQGAADIHL 229
>gi|373849836|ref|ZP_09592637.1| FeS assembly protein SufB [Opitutaceae bacterium TAV5]
gi|372476001|gb|EHP36010.1| FeS assembly protein SufB [Opitutaceae bacterium TAV5]
Length = 486
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV P+ Y + N + R +++ +EG EV +E + +
Sbjct: 207 IYVPKGVKVAQPLQ-AYFRINAENFGQFE------RTLIIADEGAEVTYMEGCTAPKFST 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+V KG K+++ +QN + N ++
Sbjct: 260 STLHSAVVELVALKGAKIQYITVQNWAPNVYNL 292
>gi|417342135|ref|ZP_12123021.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357957019|gb|EHJ82217.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 495
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|22125827|ref|NP_669250.1| cysteine desulfurase [Yersinia pestis KIM10+]
gi|45441981|ref|NP_993520.1| cysteine desulfurase [Yersinia pestis biovar Microtus str. 91001]
gi|108807743|ref|YP_651659.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Antiqua]
gi|108812020|ref|YP_647787.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Nepal516]
gi|145598048|ref|YP_001162124.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Pestoides F]
gi|149365687|ref|ZP_01887722.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162418761|ref|YP_001607002.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis Angola]
gi|165927462|ref|ZP_02223294.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939488|ref|ZP_02228034.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011840|ref|ZP_02232738.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211082|ref|ZP_02237117.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400727|ref|ZP_02306233.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422168|ref|ZP_02313921.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424912|ref|ZP_02316665.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218929493|ref|YP_002347368.1| cysteine desulfurase [Yersinia pestis CO92]
gi|229837928|ref|ZP_04458087.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229895088|ref|ZP_04510264.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|229898489|ref|ZP_04513634.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229902332|ref|ZP_04517452.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|270490488|ref|ZP_06207562.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|384122039|ref|YP_005504659.1| hypothetical protein YPD4_1448 [Yersinia pestis D106004]
gi|384125959|ref|YP_005508573.1| hypothetical protein YPD8_1497 [Yersinia pestis D182038]
gi|384139770|ref|YP_005522472.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis A1122]
gi|384414554|ref|YP_005623916.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420547333|ref|ZP_15045234.1| FeS assembly protein SufB [Yersinia pestis PY-01]
gi|420552671|ref|ZP_15050001.1| FeS assembly protein SufB [Yersinia pestis PY-02]
gi|420558210|ref|ZP_15054857.1| feS assembly protein SufB [Yersinia pestis PY-03]
gi|420563689|ref|ZP_15059728.1| FeS assembly protein SufB [Yersinia pestis PY-04]
gi|420568727|ref|ZP_15064299.1| FeS assembly protein SufB [Yersinia pestis PY-05]
gi|420574383|ref|ZP_15069422.1| FeS assembly protein SufB [Yersinia pestis PY-06]
gi|420579696|ref|ZP_15074245.1| FeS assembly protein SufB [Yersinia pestis PY-07]
gi|420585034|ref|ZP_15079088.1| FeS assembly protein SufB [Yersinia pestis PY-08]
gi|420590159|ref|ZP_15083700.1| FeS assembly protein SufB [Yersinia pestis PY-09]
gi|420595551|ref|ZP_15088553.1| FeS assembly protein SufB [Yersinia pestis PY-10]
gi|420601196|ref|ZP_15093582.1| FeS assembly protein SufB [Yersinia pestis PY-11]
gi|420606636|ref|ZP_15098478.1| FeS assembly protein SufB [Yersinia pestis PY-12]
gi|420612027|ref|ZP_15103329.1| FeS assembly protein SufB [Yersinia pestis PY-13]
gi|420617392|ref|ZP_15108040.1| feS assembly protein SufB [Yersinia pestis PY-14]
gi|420622701|ref|ZP_15112778.1| FeS assembly protein SufB [Yersinia pestis PY-15]
gi|420627805|ref|ZP_15117408.1| FeS assembly protein SufB [Yersinia pestis PY-16]
gi|420632902|ref|ZP_15121998.1| feS assembly protein SufB [Yersinia pestis PY-19]
gi|420638117|ref|ZP_15126674.1| feS assembly protein SufB [Yersinia pestis PY-25]
gi|420643624|ref|ZP_15131680.1| feS assembly protein SufB [Yersinia pestis PY-29]
gi|420648865|ref|ZP_15136437.1| feS assembly protein SufB [Yersinia pestis PY-32]
gi|420654519|ref|ZP_15141517.1| feS assembly protein SufB [Yersinia pestis PY-34]
gi|420659992|ref|ZP_15146434.1| feS assembly protein SufB [Yersinia pestis PY-36]
gi|420665302|ref|ZP_15151193.1| feS assembly protein SufB [Yersinia pestis PY-42]
gi|420670202|ref|ZP_15155647.1| feS assembly protein SufB [Yersinia pestis PY-45]
gi|420675546|ref|ZP_15160508.1| FeS assembly protein SufB [Yersinia pestis PY-46]
gi|420681138|ref|ZP_15165573.1| feS assembly protein SufB [Yersinia pestis PY-47]
gi|420686434|ref|ZP_15170298.1| feS assembly protein SufB [Yersinia pestis PY-48]
gi|420691643|ref|ZP_15174883.1| feS assembly protein SufB [Yersinia pestis PY-52]
gi|420697428|ref|ZP_15179958.1| FeS assembly protein SufB [Yersinia pestis PY-53]
gi|420703079|ref|ZP_15184574.1| feS assembly protein SufB [Yersinia pestis PY-54]
gi|420708677|ref|ZP_15189373.1| feS assembly protein SufB [Yersinia pestis PY-55]
gi|420714086|ref|ZP_15194208.1| FeS assembly protein SufB [Yersinia pestis PY-56]
gi|420719565|ref|ZP_15198953.1| FeS assembly protein SufB [Yersinia pestis PY-58]
gi|420725081|ref|ZP_15203758.1| FeS assembly protein SufB [Yersinia pestis PY-59]
gi|420730688|ref|ZP_15208777.1| FeS assembly protein SufB [Yersinia pestis PY-60]
gi|420735708|ref|ZP_15213321.1| FeS assembly protein SufB [Yersinia pestis PY-61]
gi|420741185|ref|ZP_15218244.1| FeS assembly protein SufB [Yersinia pestis PY-63]
gi|420746770|ref|ZP_15223028.1| feS assembly protein SufB [Yersinia pestis PY-64]
gi|420752336|ref|ZP_15227922.1| FeS assembly protein SufB [Yersinia pestis PY-65]
gi|420757917|ref|ZP_15232531.1| feS assembly protein SufB [Yersinia pestis PY-66]
gi|420763387|ref|ZP_15237201.1| FeS assembly protein SufB [Yersinia pestis PY-71]
gi|420768580|ref|ZP_15241876.1| FeS assembly protein SufB [Yersinia pestis PY-72]
gi|420773595|ref|ZP_15246399.1| FeS assembly protein SufB [Yersinia pestis PY-76]
gi|420779150|ref|ZP_15251310.1| FeS assembly protein SufB [Yersinia pestis PY-88]
gi|420784744|ref|ZP_15256210.1| FeS assembly protein SufB [Yersinia pestis PY-89]
gi|420789958|ref|ZP_15260863.1| feS assembly protein SufB [Yersinia pestis PY-90]
gi|420795464|ref|ZP_15265819.1| FeS assembly protein SufB [Yersinia pestis PY-91]
gi|420800522|ref|ZP_15270359.1| FeS assembly protein SufB [Yersinia pestis PY-92]
gi|420805912|ref|ZP_15275231.1| FeS assembly protein SufB [Yersinia pestis PY-93]
gi|420811218|ref|ZP_15280016.1| feS assembly protein SufB [Yersinia pestis PY-94]
gi|420816779|ref|ZP_15285018.1| FeS assembly protein SufB [Yersinia pestis PY-95]
gi|420822078|ref|ZP_15289790.1| FeS assembly protein SufB [Yersinia pestis PY-96]
gi|420827164|ref|ZP_15294348.1| FeS assembly protein SufB [Yersinia pestis PY-98]
gi|420832857|ref|ZP_15299496.1| FeS assembly protein SufB [Yersinia pestis PY-99]
gi|420837722|ref|ZP_15303894.1| FeS assembly protein SufB [Yersinia pestis PY-100]
gi|420842905|ref|ZP_15308591.1| FeS assembly protein SufB [Yersinia pestis PY-101]
gi|420854086|ref|ZP_15318430.1| FeS assembly protein SufB [Yersinia pestis PY-103]
gi|420859412|ref|ZP_15323056.1| FeS assembly protein SufB [Yersinia pestis PY-113]
gi|421763897|ref|ZP_16200689.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis INS]
gi|21958756|gb|AAM85501.1|AE013796_4 hypothetical protein y1935 [Yersinia pestis KIM10+]
gi|45436844|gb|AAS62397.1| Predicted membrane components of an uncharacterized iron-regulated
ABC-type transporter SufB [Yersinia pestis biovar
Microtus str. 91001]
gi|108775668|gb|ABG18187.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Nepal516]
gi|108779656|gb|ABG13714.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Antiqua]
gi|115348104|emb|CAL21031.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209744|gb|ABP39151.1| Iron-regulated ABC transporter membrane component SufB [Yersinia
pestis Pestoides F]
gi|149292100|gb|EDM42174.1| hypothetical protein YPE_0857 [Yersinia pestis CA88-4125]
gi|162351576|gb|ABX85524.1| FeS assembly protein SufB [Yersinia pestis Angola]
gi|165912537|gb|EDR31168.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
IP275]
gi|165920517|gb|EDR37794.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989305|gb|EDR41606.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166208262|gb|EDR52742.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958980|gb|EDR56001.1| FeS assembly protein SufB [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049580|gb|EDR60988.1| FeS assembly protein SufB [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056099|gb|EDR65877.1| FeS assembly protein SufB [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680667|gb|EEO76763.1| component of SufBCD complex [Yersinia pestis Nepal516]
gi|229688037|gb|EEO80108.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694294|gb|EEO84341.1| component of SufBCD complex [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701850|gb|EEO89873.1| component of SufBCD complex [Yersinia pestis Pestoides A]
gi|262361635|gb|ACY58356.1| hypothetical protein YPD4_1448 [Yersinia pestis D106004]
gi|262365623|gb|ACY62180.1| hypothetical protein YPD8_1497 [Yersinia pestis D182038]
gi|270338992|gb|EFA49769.1| FeS assembly protein SufB [Yersinia pestis KIM D27]
gi|320015058|gb|ADV98629.1| component of SufBCD complex [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342854899|gb|AEL73452.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis A1122]
gi|391425364|gb|EIQ87646.1| FeS assembly protein SufB [Yersinia pestis PY-01]
gi|391426760|gb|EIQ88921.1| FeS assembly protein SufB [Yersinia pestis PY-02]
gi|391427596|gb|EIQ89667.1| feS assembly protein SufB [Yersinia pestis PY-03]
gi|391440706|gb|EIR01255.1| FeS assembly protein SufB [Yersinia pestis PY-04]
gi|391442229|gb|EIR02650.1| FeS assembly protein SufB [Yersinia pestis PY-05]
gi|391445618|gb|EIR05727.1| FeS assembly protein SufB [Yersinia pestis PY-06]
gi|391457786|gb|EIR16701.1| FeS assembly protein SufB [Yersinia pestis PY-07]
gi|391458746|gb|EIR17584.1| FeS assembly protein SufB [Yersinia pestis PY-08]
gi|391460928|gb|EIR19586.1| FeS assembly protein SufB [Yersinia pestis PY-09]
gi|391473882|gb|EIR31222.1| FeS assembly protein SufB [Yersinia pestis PY-10]
gi|391475439|gb|EIR32643.1| FeS assembly protein SufB [Yersinia pestis PY-11]
gi|391476270|gb|EIR33406.1| FeS assembly protein SufB [Yersinia pestis PY-12]
gi|391489846|gb|EIR45552.1| FeS assembly protein SufB [Yersinia pestis PY-13]
gi|391490968|gb|EIR46572.1| FeS assembly protein SufB [Yersinia pestis PY-15]
gi|391492843|gb|EIR48253.1| feS assembly protein SufB [Yersinia pestis PY-14]
gi|391505308|gb|EIR59334.1| FeS assembly protein SufB [Yersinia pestis PY-16]
gi|391506199|gb|EIR60143.1| feS assembly protein SufB [Yersinia pestis PY-19]
gi|391510764|gb|EIR64263.1| feS assembly protein SufB [Yersinia pestis PY-25]
gi|391521173|gb|EIR73663.1| feS assembly protein SufB [Yersinia pestis PY-29]
gi|391523455|gb|EIR75764.1| feS assembly protein SufB [Yersinia pestis PY-34]
gi|391524510|gb|EIR76723.1| feS assembly protein SufB [Yersinia pestis PY-32]
gi|391536503|gb|EIR87480.1| feS assembly protein SufB [Yersinia pestis PY-36]
gi|391539231|gb|EIR89970.1| feS assembly protein SufB [Yersinia pestis PY-42]
gi|391541216|gb|EIR91779.1| feS assembly protein SufB [Yersinia pestis PY-45]
gi|391554346|gb|EIS03601.1| FeS assembly protein SufB [Yersinia pestis PY-46]
gi|391554821|gb|EIS04032.1| feS assembly protein SufB [Yersinia pestis PY-47]
gi|391556114|gb|EIS05225.1| feS assembly protein SufB [Yersinia pestis PY-48]
gi|391569502|gb|EIS17081.1| feS assembly protein SufB [Yersinia pestis PY-52]
gi|391570434|gb|EIS17901.1| FeS assembly protein SufB [Yersinia pestis PY-53]
gi|391577249|gb|EIS23702.1| feS assembly protein SufB [Yersinia pestis PY-54]
gi|391583125|gb|EIS28821.1| feS assembly protein SufB [Yersinia pestis PY-55]
gi|391586099|gb|EIS31437.1| FeS assembly protein SufB [Yersinia pestis PY-56]
gi|391597346|gb|EIS41179.1| FeS assembly protein SufB [Yersinia pestis PY-58]
gi|391599219|gb|EIS42864.1| FeS assembly protein SufB [Yersinia pestis PY-60]
gi|391600926|gb|EIS44398.1| FeS assembly protein SufB [Yersinia pestis PY-59]
gi|391613835|gb|EIS55762.1| FeS assembly protein SufB [Yersinia pestis PY-61]
gi|391614397|gb|EIS56270.1| FeS assembly protein SufB [Yersinia pestis PY-63]
gi|391618746|gb|EIS60112.1| feS assembly protein SufB [Yersinia pestis PY-64]
gi|391626317|gb|EIS66690.1| FeS assembly protein SufB [Yersinia pestis PY-65]
gi|391633985|gb|EIS73321.1| feS assembly protein SufB [Yersinia pestis PY-66]
gi|391637268|gb|EIS76210.1| FeS assembly protein SufB [Yersinia pestis PY-71]
gi|391639778|gb|EIS78413.1| FeS assembly protein SufB [Yersinia pestis PY-72]
gi|391649312|gb|EIS86719.1| FeS assembly protein SufB [Yersinia pestis PY-76]
gi|391653568|gb|EIS90507.1| FeS assembly protein SufB [Yersinia pestis PY-88]
gi|391658259|gb|EIS94682.1| FeS assembly protein SufB [Yersinia pestis PY-89]
gi|391662316|gb|EIS98264.1| feS assembly protein SufB [Yersinia pestis PY-90]
gi|391670333|gb|EIT05386.1| FeS assembly protein SufB [Yersinia pestis PY-91]
gi|391679589|gb|EIT13708.1| FeS assembly protein SufB [Yersinia pestis PY-93]
gi|391680853|gb|EIT14864.1| FeS assembly protein SufB [Yersinia pestis PY-92]
gi|391681695|gb|EIT15634.1| feS assembly protein SufB [Yersinia pestis PY-94]
gi|391693500|gb|EIT26245.1| FeS assembly protein SufB [Yersinia pestis PY-95]
gi|391696684|gb|EIT29146.1| FeS assembly protein SufB [Yersinia pestis PY-96]
gi|391698304|gb|EIT30625.1| FeS assembly protein SufB [Yersinia pestis PY-98]
gi|391708961|gb|EIT40177.1| FeS assembly protein SufB [Yersinia pestis PY-99]
gi|391714260|gb|EIT44935.1| FeS assembly protein SufB [Yersinia pestis PY-100]
gi|391714659|gb|EIT45295.1| FeS assembly protein SufB [Yersinia pestis PY-101]
gi|391728946|gb|EIT57989.1| FeS assembly protein SufB [Yersinia pestis PY-103]
gi|391734204|gb|EIT62486.1| FeS assembly protein SufB [Yersinia pestis PY-113]
gi|411175211|gb|EKS45237.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pestis INS]
Length = 503
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 201 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 251
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 252 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQN 294
>gi|449484639|ref|XP_002197890.2| PREDICTED: guanylate cyclase soluble subunit alpha-2 [Taeniopygia
guttata]
Length = 714
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 78/200 (39%), Gaps = 32/200 (16%)
Query: 2 SALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQT---TFPQATFSDP--FVIQLAESL 56
S L+F H N N L P P +R+S+ T FP DP V+QL E L
Sbjct: 269 SCLTFLIKEHENANTTKTLPPGTSHSPLDLRISISTFCRAFPFHLMFDPNMLVLQLGEGL 328
Query: 57 EDSLPSSSSSLPQPLPLQKLRDSSSQTL----------LSTPWPSR---KDEPFRFTDTS 103
L + + L Q+ D S + LSTP+ R +D D
Sbjct: 329 RKQLRCDTH---KTLKFQECFDIVSPKISATFERVLLRLSTPFVIRTKLEDSDSESKDKV 385
Query: 104 MIKSSQIQPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLP------DGVYVGSL 157
M Q+ + +S L + + P + +D + L+LS++P D + VG
Sbjct: 386 MEIKGQMIHVPESNSILFLGS----PCVDKLDELM-GRGLHLSDIPIHDATRDVILVGEQ 440
Query: 158 LGVSDGIMKRVSDFISEFQC 177
DG+ KR+ + +C
Sbjct: 441 AKAQDGLKKRMDKLKATLEC 460
>gi|56413656|ref|YP_150731.1| cysteine desulfurase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197362580|ref|YP_002142217.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|56127913|gb|AAV77419.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094057|emb|CAR59557.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 495
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|16764720|ref|NP_460335.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167994391|ref|ZP_02575483.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233560|ref|ZP_02658618.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168239251|ref|ZP_02664309.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168463223|ref|ZP_02697154.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168822236|ref|ZP_02834236.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194468610|ref|ZP_03074594.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735936|ref|YP_002114385.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197251302|ref|YP_002146669.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197265043|ref|ZP_03165117.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|238910814|ref|ZP_04654651.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|374980376|ref|ZP_09721706.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|375001528|ref|ZP_09725868.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|378449879|ref|YP_005237238.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|378699257|ref|YP_005181214.1| hypothetical protein SL1344_1304 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983927|ref|YP_005247082.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988710|ref|YP_005251874.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|379700541|ref|YP_005242269.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383496081|ref|YP_005396770.1| hypothetical protein UMN798_1428 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|409250321|ref|YP_006886132.1| UPF0051 protein slr0074 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416422327|ref|ZP_11690231.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|416431056|ref|ZP_11695338.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|416441173|ref|ZP_11701385.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|416446458|ref|ZP_11705048.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|416452108|ref|ZP_11708775.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|416458879|ref|ZP_11713388.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|416468020|ref|ZP_11717767.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|416480044|ref|ZP_11722701.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416489538|ref|ZP_11726302.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|416497558|ref|ZP_11729826.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416507518|ref|ZP_11735466.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|416524102|ref|ZP_11741315.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|416528383|ref|ZP_11743833.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|416535725|ref|ZP_11747979.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|416542916|ref|ZP_11751916.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|416554033|ref|ZP_11758061.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|416563008|ref|ZP_11762594.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|416571483|ref|ZP_11766717.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|416576137|ref|ZP_11768824.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|416583433|ref|ZP_11773285.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|416590849|ref|ZP_11778024.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|416598888|ref|ZP_11783239.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|416608035|ref|ZP_11789029.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|416611301|ref|ZP_11790731.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|416624420|ref|ZP_11798041.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|416630420|ref|ZP_11800720.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|416640635|ref|ZP_11805100.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|416650902|ref|ZP_11810667.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|416654585|ref|ZP_11812243.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|416665847|ref|ZP_11816998.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|416707093|ref|ZP_11832191.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|416714389|ref|ZP_11837707.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|416717176|ref|ZP_11839457.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|416725071|ref|ZP_11845441.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|416734888|ref|ZP_11851329.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|416738593|ref|ZP_11853383.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|416759101|ref|ZP_11864029.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|416762034|ref|ZP_11866084.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|416768072|ref|ZP_11870349.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|417349393|ref|ZP_12128082.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|417358410|ref|ZP_12133312.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|417365839|ref|ZP_12138330.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|417415919|ref|ZP_12159462.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|417462638|ref|ZP_12164572.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|417475439|ref|ZP_12170251.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|417539665|ref|ZP_12191897.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|418485793|ref|ZP_13054775.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|418489735|ref|ZP_13056435.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|418495571|ref|ZP_13062013.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|418499134|ref|ZP_13065543.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|418503012|ref|ZP_13069381.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|418510217|ref|ZP_13076503.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|418513884|ref|ZP_13080105.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|418527164|ref|ZP_13093121.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|418761153|ref|ZP_13317298.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|418768710|ref|ZP_13324754.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|418769649|ref|ZP_13325676.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|418776111|ref|ZP_13332060.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|418780452|ref|ZP_13336341.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|418786117|ref|ZP_13341937.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|418788508|ref|ZP_13344302.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|418795830|ref|ZP_13351531.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|418798569|ref|ZP_13354246.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|418802308|ref|ZP_13357935.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|419787685|ref|ZP_14313392.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|419792059|ref|ZP_14317702.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|422025521|ref|ZP_16371951.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|422030525|ref|ZP_16376724.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|427549180|ref|ZP_18927261.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|427564806|ref|ZP_18931963.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|427584743|ref|ZP_18936761.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|427607173|ref|ZP_18941575.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|427632270|ref|ZP_18946521.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|427655564|ref|ZP_18951280.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|427666720|ref|ZP_18960956.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|427754914|ref|ZP_18966080.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|437817795|ref|ZP_20842778.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|440765256|ref|ZP_20944276.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|440767713|ref|ZP_20946689.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
gi|440774163|ref|ZP_20953051.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|16419890|gb|AAL20294.1| putative ABC transporter [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194454974|gb|EDX43813.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194711438|gb|ACF90659.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195633995|gb|EDX52347.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197215005|gb|ACH52402.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243298|gb|EDY25918.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197287987|gb|EDY27374.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|205327762|gb|EDZ14526.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332392|gb|EDZ19156.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205341364|gb|EDZ28128.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|267993257|gb|ACY88142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157905|emb|CBW17400.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912355|dbj|BAJ36329.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320086149|emb|CBY95923.1| UPF0051 protein slr0074 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321223996|gb|EFX49059.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322616754|gb|EFY13663.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322619986|gb|EFY16859.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322622297|gb|EFY19142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322627820|gb|EFY24610.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322633081|gb|EFY29824.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636673|gb|EFY33376.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322641302|gb|EFY37943.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322644930|gb|EFY41463.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650231|gb|EFY46645.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322655806|gb|EFY52108.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660132|gb|EFY56371.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322665302|gb|EFY61490.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669559|gb|EFY65707.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322673485|gb|EFY69587.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322677413|gb|EFY73477.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679924|gb|EFY75963.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322687396|gb|EFY83368.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323129640|gb|ADX17070.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|323192349|gb|EFZ77580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323198632|gb|EFZ83733.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203113|gb|EFZ88144.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323213807|gb|EFZ98585.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323217655|gb|EGA02370.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323229457|gb|EGA13580.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323232680|gb|EGA16776.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323240282|gb|EGA24326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323242730|gb|EGA26751.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323245941|gb|EGA29929.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323252815|gb|EGA36652.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323260086|gb|EGA43711.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323267149|gb|EGA50634.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323271527|gb|EGA54948.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332988257|gb|AEF07240.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|353076216|gb|EHB41976.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353573044|gb|EHC36505.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353591301|gb|EHC49605.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Give str. S5-487]
gi|353593376|gb|EHC51143.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353621343|gb|EHC71186.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Mississippi str. A4-633]
gi|353631506|gb|EHC78796.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|353644278|gb|EHC88276.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Rubislaw str. A4-653]
gi|353664053|gb|EHD02567.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|363549028|gb|EHL33386.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. ATCC
BAA710]
gi|363553528|gb|EHL37776.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB31]
gi|363553700|gb|EHL37946.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. LQC 10]
gi|363562219|gb|EHL46325.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 29N]
gi|363565933|gb|EHL49957.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. SARB30]
gi|363572212|gb|EHL56105.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 42N]
gi|363574013|gb|EHL57886.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str. 4441 H]
gi|366055683|gb|EHN20018.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
80959-06]
gi|366059427|gb|EHN23701.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035318]
gi|366068358|gb|EHN32499.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035278]
gi|366071669|gb|EHN35763.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035320]
gi|366074736|gb|EHN38798.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035321]
gi|366077077|gb|EHN41102.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
CT_02035327]
gi|366080798|gb|EHN44755.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Pomona str. ATCC 10729]
gi|366827784|gb|EHN54682.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|372204633|gb|EHP18160.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008286]
gi|380462902|gb|AFD58305.1| hypothetical protein UMN798_1428 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|392619180|gb|EIX01565.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. Levine 1]
gi|392619443|gb|EIX01827.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. Levine 15]
gi|392730710|gb|EIZ87950.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35199]
gi|392739095|gb|EIZ96234.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21539]
gi|392740771|gb|EIZ97886.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35185]
gi|392746744|gb|EJA03750.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 33953]
gi|392749131|gb|EJA06109.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21559]
gi|392749502|gb|EJA06479.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35188]
gi|392758358|gb|EJA15233.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19449]
gi|392762810|gb|EJA19622.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19447]
gi|392767226|gb|EJA23998.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19567]
gi|392777321|gb|EJA34004.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 35202]
gi|414020326|gb|EKT03913.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm1]
gi|414020563|gb|EKT04142.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm8]
gi|414022096|gb|EKT05597.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm2]
gi|414034439|gb|EKT17366.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm9]
gi|414035796|gb|EKT18652.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm3]
gi|414039310|gb|EKT21987.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm4]
gi|414048811|gb|EKT31045.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm10]
gi|414050376|gb|EKT32552.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm6]
gi|414060397|gb|EKT41912.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm12]
gi|414066024|gb|EKT46662.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|435308135|gb|ELO83140.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
SARB17]
gi|436413681|gb|ELP11614.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH10GFN094]
gi|436414380|gb|ELP12310.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH11G1113]
gi|436419622|gb|ELP17497.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Agona str. SH08SF124]
Length = 495
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|417326672|ref|ZP_12112299.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353572646|gb|EHC36228.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
Length = 495
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|157145963|ref|YP_001453282.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
koseri ATCC BAA-895]
gi|157083168|gb|ABV12846.1| hypothetical protein CKO_01716 [Citrobacter koseri ATCC BAA-895]
Length = 495
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|379709622|ref|YP_005264827.1| putative component of SufBCD complex [Nocardia cyriacigeorgica
GUH-2]
gi|374847121|emb|CCF64191.1| putative component of SufBCD complex [Nocardia cyriacigeorgica
GUH-2]
Length = 478
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 199 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 251
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 252 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 280
>gi|418299501|ref|ZP_12911334.1| iron-sulfur cluster assembly protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355534966|gb|EHH04262.1| iron-sulfur cluster assembly protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 423
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 32/240 (13%)
Query: 55 SLEDSLPSSSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTD-TSMIKS---SQI 110
+L D+ + S LP + RD L + P+R+ E + +TD S++++ Q
Sbjct: 15 ALIDAYTAKFSELPGNGAVVAARDVLFDDLKTGGLPTRRIEAWHYTDLKSLLRAIPEDQP 74
Query: 111 QPITRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPD---GVYVGSLLGVSDGIMKR 167
P+ ++S+ + ++ + N+ + D + SLL DG
Sbjct: 75 APVIEKAASVIAGSPV---------AYVLHGTANVGKVEDISVSSFAESLL---DG---S 119
Query: 168 VSDFISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPIS 227
+ ++E D+ ING D + +PA +E PI L+ ++ G + P+
Sbjct: 120 AAAGLAEASKDDVIGRINGSFVRDGLTLDIPADADIEKPIELQ--AIHGAGQVHSRFPVR 177
Query: 228 NPRVVVLVEEGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
+ G + +IE + +D + +SV ++V+ G +V LQ Q H+
Sbjct: 178 FGK-------GSKATVIERHLSVT-SDAAFVSSVTDIVVEDGAEVTWIILQQQGAADIHL 229
>gi|259908557|ref|YP_002648913.1| cysteine desulfurase activator complex subunit SufB [Erwinia
pyrifoliae Ep1/96]
gi|387871435|ref|YP_005802809.1| FeS assembly protein SufB [Erwinia pyrifoliae DSM 12163]
gi|224964179|emb|CAX55686.1| SufB protein [Erwinia pyrifoliae Ep1/96]
gi|283478522|emb|CAY74438.1| FeS assembly protein SufB [Erwinia pyrifoliae DSM 12163]
Length = 497
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 195 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 245
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 246 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 288
>gi|54025530|ref|YP_119772.1| hypothetical protein nfa35600 [Nocardia farcinica IFM 10152]
gi|54017038|dbj|BAD58408.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 485
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 287
>gi|391227907|ref|ZP_10264114.1| FeS assembly protein SufB [Opitutaceae bacterium TAV1]
gi|391223400|gb|EIQ01820.1| FeS assembly protein SufB [Opitutaceae bacterium TAV1]
Length = 486
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV P+ Y + N + R +++ +EG EV +E + +
Sbjct: 207 IYVPKGVKVAQPLQ-AYFRINAENFGQFE------RTLIIADEGAEVTYMEGCTAPKFST 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V KG K+++ +QN + N
Sbjct: 260 STLHSAVVELVALKGAKIQYITVQNWAPN 288
>gi|385788272|ref|YP_005819381.1| cysteine desulfurase activator complex subunit SufB [Erwinia sp.
Ejp617]
gi|310767544|gb|ADP12494.1| cysteine desulfurase activator complex subunit SufB [Erwinia sp.
Ejp617]
Length = 497
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 195 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 245
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 246 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 288
>gi|227530415|ref|ZP_03960464.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
gi|227349647|gb|EEJ39938.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus vaginalis ATCC 49540]
Length = 467
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEG 238
F ++NG IYVP G KV+ PI Y + + G + R +++V+EG
Sbjct: 174 FAALNGAVWSGGSFIYVPKGVKVKTPIQAYFRLNAENTGQFE---------RTLIIVDEG 224
Query: 239 GEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
V +E + +V+EV + K R++ +QN S N
Sbjct: 225 ASVDYVEGCTAPNYSSDSLHAAVVEVNVLKDAYCRYTTIQNWSKN 269
>gi|188533955|ref|YP_001907752.1| cysteine desulfurase activator complex subunit SufB [Erwinia
tasmaniensis Et1/99]
gi|188028997|emb|CAO96865.1| SufB protein [Erwinia tasmaniensis Et1/99]
Length = 496
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 194 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 244
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 245 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 287
>gi|167551665|ref|ZP_02345419.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|204927455|ref|ZP_03218656.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|421883432|ref|ZP_16314665.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|452120460|ref|YP_007470708.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
gi|204322797|gb|EDZ07993.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323571|gb|EDZ11410.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|379987072|emb|CCF86938.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Senftenberg str. SS209]
gi|451909464|gb|AGF81270.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Javiana str.
CFSAN001992]
Length = 495
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|153949039|ref|YP_001400717.1| cysteine desulfurase activator complex subunit SufB [Yersinia
pseudotuberculosis IP 31758]
gi|152960534|gb|ABS47995.1| FeS assembly protein SufB [Yersinia pseudotuberculosis IP 31758]
Length = 503
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 201 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 251
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 252 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQN 294
>gi|149183558|ref|ZP_01861981.1| YurU [Bacillus sp. SG-1]
gi|148848725|gb|EDL62952.1| YurU [Bacillus sp. SG-1]
Length = 465
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGIKVETPL-QAYFRINSENMGQFE------RTLIIVDEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E++I K R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIIKKDAYCRYTTIQNWANNVYNL 271
>gi|417531367|ref|ZP_12186106.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
gi|353665003|gb|EHD03266.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Urbana str. R8-2977]
Length = 495
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|300716480|ref|YP_003741283.1| SufB protein [Erwinia billingiae Eb661]
gi|299062316|emb|CAX59433.1| SufB protein [Erwinia billingiae Eb661]
Length = 497
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 195 NFFAALNSAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 245
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 246 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 288
>gi|194446209|ref|YP_002040625.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|418808907|ref|ZP_13364460.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|418813063|ref|ZP_13368584.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|418816857|ref|ZP_13372345.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|418820298|ref|ZP_13375731.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|418824928|ref|ZP_13380258.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|418832725|ref|ZP_13387659.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|418835383|ref|ZP_13390278.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|418839803|ref|ZP_13394635.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|418846401|ref|ZP_13401170.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|418849690|ref|ZP_13404415.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|418855387|ref|ZP_13410043.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|418858859|ref|ZP_13413469.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|418862941|ref|ZP_13417479.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|418868564|ref|ZP_13423005.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
gi|194404872|gb|ACF65094.1| FeS assembly protein SufB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|392774289|gb|EJA30984.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22513]
gi|392775590|gb|EJA32282.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21550]
gi|392789025|gb|EJA45545.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21538]
gi|392792567|gb|EJA49021.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22425]
gi|392796795|gb|EJA53123.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM
N18486]
gi|392803793|gb|EJA59977.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM N1543]
gi|392810274|gb|EJA66294.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19443]
gi|392812247|gb|EJA68242.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 21554]
gi|392818790|gb|EJA74670.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 22462]
gi|392820693|gb|EJA76542.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 37978]
gi|392821445|gb|EJA77269.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19593]
gi|392831626|gb|EJA87257.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19470]
gi|392832809|gb|EJA88424.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 19536]
gi|392837254|gb|EJA92824.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Newport str. CVM 4176]
Length = 495
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|404258330|ref|ZP_10961651.1| iron-sulfur cluster assembly protein SufB [Gordonia namibiensis
NBRC 108229]
gi|403403107|dbj|GAC00061.1| iron-sulfur cluster assembly protein SufB [Gordonia namibiensis
NBRC 108229]
Length = 484
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 286
>gi|395230881|ref|ZP_10409180.1| FeS cluster assembly protein sufB [Citrobacter sp. A1]
gi|424732258|ref|ZP_18160837.1| cluster assembly protein sufb [Citrobacter sp. L17]
gi|394715334|gb|EJF21156.1| FeS cluster assembly protein sufB [Citrobacter sp. A1]
gi|422893416|gb|EKU33264.1| cluster assembly protein sufb [Citrobacter sp. L17]
Length = 495
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|365106825|ref|ZP_09335238.1| FeS cluster assembly protein sufB [Citrobacter freundii 4_7_47CFAA]
gi|363641809|gb|EHL81184.1| FeS cluster assembly protein sufB [Citrobacter freundii 4_7_47CFAA]
Length = 495
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|87311560|ref|ZP_01093678.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
gi|87285682|gb|EAQ77598.1| hypothetical protein DSM3645_24772 [Blastopirellula marina DSM
3645]
Length = 471
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IY+P G K++ P+ Y + + G + R +++V+EG +V +E
Sbjct: 192 IYIPKGVKIDFPLQAYFRINAESMGQFE---------RTLIIVDEGAQVHYVEGCTAPMY 242
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+EV+ KG + R+S +QN + N
Sbjct: 243 TTESLHSAVVEVICKKGSRCRYSTIQNWANN 273
>gi|421844126|ref|ZP_16277285.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|411775033|gb|EKS58501.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|455646353|gb|EMF25380.1| cysteine desulfurase activator complex subunit SufB [Citrobacter
freundii GTC 09479]
Length = 495
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|421448083|ref|ZP_15897478.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
gi|396073683|gb|EJI81983.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Enteritidis str.
58-6482]
Length = 495
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|410085871|ref|ZP_11282585.1| Iron-sulfur cluster assembly protein SufB [Morganella morganii
SC01]
gi|409767419|gb|EKN51495.1| Iron-sulfur cluster assembly protein SufB [Morganella morganii
SC01]
Length = 494
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 192 NFFAALNSAVASDGTFVYVPKGVHCPMELSTYFRINAAKTGQFE---------RTILIAD 242
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 243 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 285
>gi|416685187|ref|ZP_11824895.1| cysteine desulfurase activator complex subunit SufB, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323219078|gb|EGA03583.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
Length = 432
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|213611285|ref|ZP_03370111.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 430
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|161614216|ref|YP_001588181.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|161363580|gb|ABX67348.1| hypothetical protein SPAB_01959 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 495
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|420848560|ref|ZP_15313677.1| FeS assembly protein SufB [Yersinia pestis PY-102]
gi|391725699|gb|EIT55134.1| FeS assembly protein SufB [Yersinia pestis PY-102]
Length = 492
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 190 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 240
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 241 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKNAEVKYSTVQN 283
>gi|293396327|ref|ZP_06640605.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
gi|291421116|gb|EFE94367.1| FeS assembly protein SufB [Serratia odorifera DSM 4582]
Length = 499
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 197 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 247
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 248 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 290
>gi|261343988|ref|ZP_05971633.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
gi|282568379|gb|EFB73914.1| FeS assembly protein SufB [Providencia rustigianii DSM 4541]
Length = 499
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|187734995|ref|YP_001877107.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
gi|187425047|gb|ACD04326.1| FeS assembly protein SufB [Akkermansia muciniphila ATCC BAA-835]
Length = 478
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 195 IYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEG 252
IYVP G K+++P+ Y + S G + R +++ +EG E+ +E +
Sbjct: 199 IYVPKGVKLKHPLQAYFRINSENFGQFE---------RTLIIADEGAELMYMEGCTAPQF 249
Query: 253 NDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V KG K+++ +QN S N
Sbjct: 250 ETSTLHSAVVELVALKGAKIQYVTVQNWSSN 280
>gi|359774350|ref|ZP_09277720.1| iron-sulfur cluster assembly protein SufB [Gordonia effusa NBRC
100432]
gi|359308499|dbj|GAB20498.1| iron-sulfur cluster assembly protein SufB [Gordonia effusa NBRC
100432]
Length = 485
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 287
>gi|417383732|ref|ZP_12149335.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
gi|353611058|gb|EHC63839.1| Iron-sulfur cluster assembly protein SufB [Salmonella enterica
subsp. enterica serovar Johannesburg str. S5-703]
Length = 509
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 207 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 257
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 258 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 300
>gi|270261595|ref|ZP_06189868.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
gi|333926977|ref|YP_004500556.1| FeS assembly protein SufB [Serratia sp. AS12]
gi|333931931|ref|YP_004505509.1| FeS assembly protein SufB [Serratia plymuthica AS9]
gi|386328800|ref|YP_006024970.1| FeS assembly protein SufB [Serratia sp. AS13]
gi|386824749|ref|ZP_10111878.1| cysteine desulfurase activator complex subunit SufB [Serratia
plymuthica PRI-2C]
gi|270045079|gb|EFA18170.1| hypothetical protein SOD_a08270 [Serratia odorifera 4Rx13]
gi|333473538|gb|AEF45248.1| FeS assembly protein SufB [Serratia plymuthica AS9]
gi|333491037|gb|AEF50199.1| FeS assembly protein SufB [Serratia sp. AS12]
gi|333961133|gb|AEG27906.1| FeS assembly protein SufB [Serratia sp. AS13]
gi|386378194|gb|EIJ19002.1| cysteine desulfurase activator complex subunit SufB [Serratia
plymuthica PRI-2C]
Length = 498
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 289
>gi|269926803|ref|YP_003323426.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
gi|269790463|gb|ACZ42604.1| FeS assembly protein SufB [Thermobaculum terrenum ATCC BAA-798]
Length = 469
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++ ++G V +E +
Sbjct: 190 IYVPEGVKVELPL-QAYFRINAENMGQFE------RTLIIADKGSYVHYVEGCTAPVYST 242
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ +G +VR++ +QN S N ++
Sbjct: 243 DSLHSAVVEIIVKEGARVRYTTIQNWSKNVYNL 275
>gi|441513421|ref|ZP_20995251.1| iron-sulfur cluster assembly protein SufB [Gordonia amicalis NBRC
100051]
gi|441451719|dbj|GAC53212.1| iron-sulfur cluster assembly protein SufB [Gordonia amicalis NBRC
100051]
Length = 484
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 286
>gi|421492058|ref|ZP_15939420.1| SUFB [Morganella morganii subsp. morganii KT]
gi|455739565|ref|YP_007505831.1| Iron-sulfur cluster assembly protein SufB [Morganella morganii
subsp. morganii KT]
gi|400193818|gb|EJO26952.1| SUFB [Morganella morganii subsp. morganii KT]
gi|455421128|gb|AGG31458.1| Iron-sulfur cluster assembly protein SufB [Morganella morganii
subsp. morganii KT]
Length = 494
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 192 NFFAALNSAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 242
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 243 EGSYVSYIEGCSAPVRDTYQLHAAVVEVIIHKDAEVKYSTVQN 285
>gi|404214898|ref|YP_006669093.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Gordonia sp. KTR9]
gi|403645697|gb|AFR48937.1| ABC-type transport system involved in Fe-S cluster assembly,
permease component [Gordonia sp. KTR9]
Length = 483
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 204 IYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 256
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 257 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 285
>gi|420366566|ref|ZP_14867403.1| feS assembly protein SufB [Shigella flexneri 1235-66]
gi|391324082|gb|EIQ80693.1| feS assembly protein SufB [Shigella flexneri 1235-66]
Length = 495
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|375123733|ref|ZP_09768897.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
gi|326627983|gb|EGE34326.1| cysteine desulfurase activator complex subunit SufB [Salmonella
enterica subsp. enterica serovar Gallinarum str. SG9]
Length = 508
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 206 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 256
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 257 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 299
>gi|157370420|ref|YP_001478409.1| cysteine desulfurase activator complex subunit SufB [Serratia
proteamaculans 568]
gi|157322184|gb|ABV41281.1| FeS assembly protein SufB [Serratia proteamaculans 568]
Length = 498
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 289
>gi|343924600|ref|ZP_08764148.1| iron-sulfur cluster assembly protein SufB [Gordonia alkanivorans
NBRC 16433]
gi|409388748|ref|ZP_11240681.1| iron-sulfur cluster assembly protein SufB [Gordonia rubripertincta
NBRC 101908]
gi|343765535|dbj|GAA11074.1| iron-sulfur cluster assembly protein SufB [Gordonia alkanivorans
NBRC 16433]
gi|403201120|dbj|GAB83915.1| iron-sulfur cluster assembly protein SufB [Gordonia rubripertincta
NBRC 101908]
Length = 484
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 205 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKT 257
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG+ R++ +QN S N
Sbjct: 258 DSLHSAVVEIIVKKGGRCRYTTIQNWSNN 286
>gi|384106090|ref|ZP_10007000.1| FeS assembly protein [Rhodococcus imtechensis RKJ300]
gi|432336665|ref|ZP_19588152.1| FeS assembly protein [Rhodococcus wratislaviensis IFP 2016]
gi|383834281|gb|EID73723.1| FeS assembly protein [Rhodococcus imtechensis RKJ300]
gi|430776418|gb|ELB91854.1| FeS assembly protein [Rhodococcus wratislaviensis IFP 2016]
Length = 486
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 288
>gi|437237824|ref|ZP_20714021.1| cysteine desulfurase activator complex subunit SufB, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
gi|435186626|gb|ELN71446.1| cysteine desulfurase activator complex subunit SufB, partial
[Salmonella enterica subsp. enterica serovar Enteritidis
str. 13183-1]
Length = 403
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 286
>gi|453065551|gb|EMF06512.1| cysteine desulfurase activator complex subunit SufB [Serratia
marcescens VGH107]
Length = 498
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 196 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 289
>gi|312139627|ref|YP_004006963.1| fe-s cluster assembly protein sufb [Rhodococcus equi 103S]
gi|311888966|emb|CBH48279.1| Fe-S cluster assembly protein SufB [Rhodococcus equi 103S]
Length = 481
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 283
>gi|226366393|ref|YP_002784176.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus B4]
gi|226244883|dbj|BAH55231.1| putative iron-sulfur cluster assembly protein SufB [Rhodococcus
opacus B4]
Length = 486
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 288
>gi|224543037|ref|ZP_03683576.1| hypothetical protein CATMIT_02237 [Catenibacterium mitsuokai DSM
15897]
gi|224524062|gb|EEF93167.1| FeS assembly protein SufB [Catenibacterium mitsuokai DSM 15897]
Length = 468
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 181 FWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGE 240
F ++NG IYVP K++ P+ + ++S+++ R +++V+EG +
Sbjct: 174 FSALNGAVWSGGSFIYVPPHTKLDKPLQSYF------RINSERMA-QFERTLIIVDEGSD 226
Query: 241 VGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
+ +E + V+E+++GK R++ +QN S N
Sbjct: 227 IHYVEGCTAPSYSKDSLHAGVVEIIVGKNAHCRYTTIQNWSKN 269
>gi|409358439|ref|ZP_11236802.1| FeS assembly protein SufB [Dietzia alimentaria 72]
Length = 485
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
+YVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 206 VYVPPGVHVDIPL-QAYFRINTENMGQFE------RTLIIVDEGAYVHYVEGCTAPIYKS 258
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG+ R++ +QN S N ++
Sbjct: 259 DSLHSAVVEIIVKKGGRCRYTTIQNWSNNVYNL 291
>gi|421783258|ref|ZP_16219709.1| feS assembly protein SufB [Serratia plymuthica A30]
gi|407754698|gb|EKF64830.1| feS assembly protein SufB [Serratia plymuthica A30]
Length = 487
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 185 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 235
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 236 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 278
>gi|334146347|ref|YP_004509274.1| putative ABC transporter permease [Porphyromonas gingivalis TDC60]
gi|333803501|dbj|BAK24708.1| putative ABC transporter permease protein [Porphyromonas gingivalis
TDC60]
Length = 447
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 94/245 (38%), Gaps = 37/245 (15%)
Query: 70 PLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSM----------------IKSSQIQPI 113
P L + R+ +S S P E ++ TD S I+ +
Sbjct: 23 PRVLNEQREKASMAFASKALPRYGTENYQRTDLSELFGYDYGVNLNRVNFPIRQKEAFHC 82
Query: 114 TRPSSSLDVSTDAQFPSLVLIDGFIQNSALNLSNLPDGVYVGSL--LGVSDGIMKRVSDF 171
T P D+ TD + +++ N +S LP+G +VGSL +S +
Sbjct: 83 TLP----DLDTDLCY----IVNDAYDNEWSRVSELPEGAFVGSLSDFALSHPEIAARYYA 134
Query: 172 ISEFQCGDLFWSINGMGAPDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRV 231
+ D + + M A D VIY+P G ++NPI L L + + ++N R+
Sbjct: 135 QAAAPDHDGIIAFSTMFAQDGFVIYLPDGTTLKNPIQLVQL------LRADMEILANRRL 188
Query: 232 VVLVEEGGEVG--IIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKW 289
++++ + E I E + + V+E+ + + L+ S N I
Sbjct: 189 LIILGKDAEASLLICEHTLDTHS---FLVTEVVEIFAAENSRFALYDLEESSKNTKRIAS 245
Query: 290 TAVRQ 294
VRQ
Sbjct: 246 VHVRQ 250
>gi|238796352|ref|ZP_04639861.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
gi|238719797|gb|EEQ11604.1| hypothetical protein ymoll0001_21800 [Yersinia mollaretii ATCC
43969]
Length = 485
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 183 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 233
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 234 EGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQN 276
>gi|419962295|ref|ZP_14478288.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus M213]
gi|414572242|gb|EKT82942.1| iron-sulfur cluster assembly protein SufB [Rhodococcus opacus M213]
Length = 486
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 288
>gi|365970158|ref|YP_004951719.1| FeS cluster assembly protein sufB [Enterobacter cloacae EcWSU1]
gi|365749071|gb|AEW73298.1| FeS cluster assembly protein sufB [Enterobacter cloacae EcWSU1]
Length = 509
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 207 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 257
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 258 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 300
>gi|197285274|ref|YP_002151146.1| cysteine desulfurase activator complex subunit SufB [Proteus
mirabilis HI4320]
gi|227355704|ref|ZP_03840097.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
gi|425068231|ref|ZP_18471347.1| FeS cluster assembly protein sufB [Proteus mirabilis WGLW6]
gi|425072375|ref|ZP_18475481.1| FeS cluster assembly protein sufB [Proteus mirabilis WGLW4]
gi|194682761|emb|CAR42984.1| putative component of cysteine desulfurase activator complex
[Proteus mirabilis HI4320]
gi|227164023|gb|EEI48920.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Proteus mirabilis ATCC 29906]
gi|404597590|gb|EKA98087.1| FeS cluster assembly protein sufB [Proteus mirabilis WGLW4]
gi|404600213|gb|EKB00659.1| FeS cluster assembly protein sufB [Proteus mirabilis WGLW6]
Length = 498
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 196 NYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFE---------RTILIAD 246
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 247 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 289
>gi|387928758|ref|ZP_10131436.1| YurU [Bacillus methanolicus PB1]
gi|387588344|gb|EIJ80666.1| YurU [Bacillus methanolicus PB1]
Length = 465
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+EG V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEGAHVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKDAYCRYTTIQNWANNVYNL 271
>gi|363420543|ref|ZP_09308635.1| fe-s cluster assembly protein sufb [Rhodococcus pyridinivorans
AK37]
gi|359735785|gb|EHK84742.1| fe-s cluster assembly protein sufb [Rhodococcus pyridinivorans
AK37]
Length = 481
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 283
>gi|311069780|ref|YP_003974703.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
gi|419821852|ref|ZP_14345442.1| FeS cluster formation protein [Bacillus atrophaeus C89]
gi|310870297|gb|ADP33772.1| FeS cluster formation protein [Bacillus atrophaeus 1942]
gi|388474023|gb|EIM10756.1| FeS cluster formation protein [Bacillus atrophaeus C89]
Length = 465
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV+ P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVDTPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN + N
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANN 267
>gi|126652017|ref|ZP_01724206.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
gi|126591107|gb|EAZ85217.1| hypothetical protein BB14905_11240 [Bacillus sp. B14905]
Length = 465
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 126 AQFPSLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSIN 185
AQ+ S V+ N +L +L G + +D ++ D ++ + ++ N
Sbjct: 121 AQYESEVVY----HNMKQDLEDL------GIVFKDTDSALRENEDIFKQYWGKVIPYTDN 170
Query: 186 GMGAPDLGV------IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGG 239
A + V IYVP G KVE P+ Y + N+ + R +++V+EG
Sbjct: 171 KFAALNSAVWSGGSFIYVPPGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEGA 223
Query: 240 EVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
V +E ++V+E+V+ K R++ +QN + N ++
Sbjct: 224 HVHYVEGCTAPVYTTNSLHSAVVEIVVRKDAYCRYTTIQNWANNVYNL 271
>gi|111024146|ref|YP_707118.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|397737724|ref|ZP_10504389.1| feS assembly protein SufB [Rhodococcus sp. JVH1]
gi|110823676|gb|ABG98960.1| FeS assembly protein [Rhodococcus jostii RHA1]
gi|396926456|gb|EJI93700.1| feS assembly protein SufB [Rhodococcus sp. JVH1]
Length = 486
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 207 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 259
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 260 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 288
>gi|440230702|ref|YP_007344495.1| Iron-regulated ABC transporter membrane component SufB [Serratia
marcescens FGI94]
gi|440052407|gb|AGB82310.1| Iron-regulated ABC transporter membrane component SufB [Serratia
marcescens FGI94]
Length = 507
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 205 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 255
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 256 EGSYVSYIEGCSAPVRDSYQLHAAVVEVILHKDAEVKYSTVQN 298
>gi|325676697|ref|ZP_08156371.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
gi|325552479|gb|EGD22167.1| FeS assembly protein SufB [Rhodococcus equi ATCC 33707]
Length = 481
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G V+ P+ Y + N+ + R +++V+EG V +E
Sbjct: 202 IYVPPGVHVDIPLQ-AYFRINTENMGQFE------RTLIIVDEGASVHYVEGCTAPIYKS 254
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+++ KGG R++ +QN S N
Sbjct: 255 DSLHSAVVEIIVKKGGHCRYTTIQNWSNN 283
>gi|226330348|ref|ZP_03805866.1| hypothetical protein PROPEN_04265 [Proteus penneri ATCC 35198]
gi|225201143|gb|EEG83497.1| FeS assembly protein SufB [Proteus penneri ATCC 35198]
Length = 500
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +Y+P G C +E Y + + + G + R +++ +
Sbjct: 198 NYFAALNAAVASDGTFVYIPKGVRCPMELSTYFRINAAQTGQFE---------RTILVAD 248
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV+I K +V++S +QN
Sbjct: 249 EGSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKDAEVKYSTVQN 291
>gi|374724835|gb|EHR76915.1| cysteine desulfurase activator FeS assembly protein SufB
[uncultured marine group II euryarchaeote]
Length = 468
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G VE P+ Y + N+ + R +++ +EG + +E +
Sbjct: 189 IYVPKGISVEMPVQ-AYFRINAKNMGQFE------RTLIIADEGSTIHYVEGCTAPSYST 241
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLN 283
++V+E+V +G K+R+S +QN S N
Sbjct: 242 DSLHSAVVELVAMEGAKIRYSTVQNWSNN 270
>gi|238753647|ref|ZP_04615009.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
gi|238708199|gb|EEQ00555.1| hypothetical protein yruck0001_13780 [Yersinia ruckeri ATCC 29473]
Length = 506
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D +YVP G C +E Y + + + G + R +++ +
Sbjct: 204 NFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFE---------RTILIAD 254
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V IE + +V+EV++ K +V++S +QN
Sbjct: 255 EGSYVSYIEGCSAPVRDTYQLHAAVVEVILHKNAEVKYSTVQN 297
>gi|225154859|ref|ZP_03723357.1| FeS assembly protein SufB [Diplosphaera colitermitum TAV2]
gi|224804389|gb|EEG22614.1| FeS assembly protein SufB [Diplosphaera colitermitum TAV2]
Length = 498
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KV P+ Y + N + R +++ +EG EV +E + +
Sbjct: 219 IYVPPGVKVAQPLQ-AYFRINAENFGQFE------RTLIIADEGAEVTYMEGCTAPKFST 271
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNA-------------AHIKW 289
++V+E+V KG K+++ +QN + N A IKW
Sbjct: 272 STLHSAVVELVALKGAKIQYITVQNWAPNVYNLVTKRGLAHENAEIKW 319
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,780,631,296
Number of Sequences: 23463169
Number of extensions: 209557656
Number of successful extensions: 539754
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 1040
Number of HSP's that attempted gapping in prelim test: 538634
Number of HSP's gapped (non-prelim): 1173
length of query: 300
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 159
effective length of database: 9,050,888,538
effective search space: 1439091277542
effective search space used: 1439091277542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)