BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022235
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQK7|AB7I_ARATH Protein ABCI7, chloroplastic OS=Arabidopsis thaliana GN=ABCI7 PE=1
SV=1
Length = 475
Score = 341 bits (874), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 174/285 (61%), Positives = 212/285 (74%), Gaps = 11/285 (3%)
Query: 13 NINRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESLEDSLPSSSSSLPQPLP 72
N++ PKL RR + V QA+FSDPFV+QLAESLEDSL +S SS
Sbjct: 15 NLSSKPKLKSNRRTTSTSVSVR-----AQASFSDPFVLQLAESLEDSLSASPSSSLP--- 66
Query: 73 LQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPIT---RPSSSLDVSTDAQFP 129
LQ++RDSS++TLLSTPWPSRKDEPFRFTDTS+I+SSQI+PI+ R S LD T+ QF
Sbjct: 67 LQRIRDSSAETLLSTPWPSRKDEPFRFTDTSLIRSSQIEPISTQQRNSEILDNLTETQFT 126
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCGDLFWSINGMGA 189
+ V+IDGF+ N + S+LPDGVY G G+ D + R+S+FI F GDLFWSINGMGA
Sbjct: 127 NAVIIDGFVSNLTIGPSDLPDGVYFGKYSGLPDELTNRISEFIGNFDSGDLFWSINGMGA 186
Query: 190 PDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG 249
PDL VIYVP GCKVENPIYL+Y S E G+ +SK+LP+SNPRV VLVEEGGE+GI+EEFVG
Sbjct: 187 PDLMVIYVPEGCKVENPIYLRYFSGETGDRESKRLPVSNPRVFVLVEEGGEIGIVEEFVG 246
Query: 250 KEGNDCYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
K+ YW N VLEVV+ K K++HSYLQ +S+ +AHIKWT VRQ
Sbjct: 247 KDEEGFYWTNPVLEVVVQKNAKLKHSYLQKESMASAHIKWTFVRQ 291
>sp|Q55792|Y076_SYNY3 UPF0051 protein slr0076 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0076 PE=3 SV=1
Length = 453
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 119/234 (50%), Gaps = 24/234 (10%)
Query: 77 RDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRPSSSLDVSTDAQF-------P 129
R ++ L S P ++DE ++FTD S +K+ I + SLDV+ F
Sbjct: 44 RQGAADLLGSLRLPHKRDEEWQFTDLSELKA--IDFVAAGKVSLDVAAAENFYLPEAHQS 101
Query: 130 SLVLIDGFIQNSALNLSNLPDGVYVGSLLGVSDGIMKRVSDFISEFQCG-DLFWSINGMG 188
LV I+GF N ++LP + S ++ +++++++ + G ++F ++N G
Sbjct: 102 RLVFINGFFTPELSNTNDLPSAITCQSWTNLAAHQREQLANYLGQKTDGNEVFSNLNTAG 161
Query: 189 APDLGVIYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFV 248
D V+++PA ++++PI+L +L+V VD + + PR++V+VE +V I E +
Sbjct: 162 MTDSAVVWIPANTELKSPIHLLFLTV----VDPTPIMVQ-PRLLVVVENNAQVTIAESY- 215
Query: 249 GKEGNDC--------YWANSVLEVVIGKGGKVRHSYLQNQSLNAAHIKWTAVRQ 294
G +C Y+ N V E+ +G+ +V H Q S ++ HI TA+ Q
Sbjct: 216 GAISTNCTDRPQQQPYFNNIVSEIYLGENAQVTHIRNQRDSGDSFHIATTAIAQ 269
>sp|O32162|SUFB_BACSU FeS cluster assembly protein SufB OS=Bacillus subtilis (strain 168)
GN=sufB PE=3 SV=1
Length = 465
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP G KVE P+ Y + N+ + R +++V+E V +E
Sbjct: 186 IYVPKGVKVETPL-QAYFRINSENMGQFE------RTLIIVDEEASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ KGG R++ +QN + N ++
Sbjct: 239 NSLHSAVVEIIVKKGGYCRYTTIQNWANNVYNL 271
>sp|Q9ZS97|AB8I_ARATH UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana
GN=ABCI8 PE=2 SV=1
Length = 557
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAGCKVENPI--YLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ + ++N D Y+P + PI Y + ++E G + R +++ E
Sbjct: 254 NYYAALNSAVFSDGSFCYIPKNTRCPMPISTYFRINAMETGQFE---------RTLIVAE 304
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
EG V +E + +V+E+ GKG ++++S +QN
Sbjct: 305 EGSFVEYLEGCTAPSYDTNQLHAAVVELYCGKGAEIKYSTVQN 347
>sp|P77522|SUFB_ECOLI FeS cluster assembly protein SufB OS=Escherichia coli (strain K12)
GN=sufB PE=1 SV=2
Length = 495
Score = 35.0 bits (79), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
E V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQN 286
>sp|Q83KW2|SUFB_SHIFL FeS cluster assembly protein SufB OS=Shigella flexneri GN=sufB PE=3
SV=1
Length = 495
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 179 DLFWSINGMGAPDLGVIYVPAG--CKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVE 236
+ F ++N A D IYVP G C +E Y + + + G + R +++ +
Sbjct: 193 NFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFE---------RTILVAD 243
Query: 237 EGGEVGIIEEFVGKEGNDCYWANSVLEVVIGKGGKVRHSYLQN 279
E V IE + +V+EV+I K +V++S +QN
Sbjct: 244 EDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQN 286
>sp|B0TZB8|ENGB_FRAP2 Probable GTP-binding protein EngB OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=engB PE=3
SV=1
Length = 197
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 3 ALSFSPHLHININRNPKLTPKRRAKPNKIRVSLQTTFPQATFSDPFVIQLAESL 56
A+SF +LHI + + KL K RA+ NK+ S TF + +D QL SL
Sbjct: 130 AISFDLNLHILLTKADKLNNKERAQANKMIESFLKTFIR---TDKISYQLFSSL 180
>sp|Q8CTA3|Y610_STAES UPF0051 protein SE_0610 OS=Staphylococcus epidermidis (strain ATCC
12228) GN=SE_0610 PE=3 SV=1
Length = 465
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E +
Sbjct: 186 IYVPKNVKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVNYVEGCTAPVYST 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q5HQP8|Y500_STAEQ UPF0051 protein SERP0500 OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=SERP0500 PE=3 SV=1
Length = 465
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E +
Sbjct: 186 IYVPKNVKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVNYVEGCTAPVYST 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q6GIH0|Y880_STAAR UPF0051 protein SAR0880 OS=Staphylococcus aureus (strain MRSA252)
GN=SAR0880 PE=3 SV=1
Length = 465
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V IE
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYIEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q49W57|Y1857_STAS1 UPF0051 protein SSP1857 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1857
PE=3 SV=1
Length = 465
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E +
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVNYVEGCTAPVYST 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q4L4T1|Y2035_STAHJ UPF0051 protein SH2035 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=SH2035 PE=3 SV=1
Length = 465
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNVKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVNYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|P47101|YJ00_YEAST UPF0508 protein YJR030C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YJR030C PE=3 SV=3
Length = 745
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGMGAPDLGVIYVP--AGCKVENPIY 208
V +GSL+ K DFIS C L + S+ + + ++ +I +P KV N Y
Sbjct: 135 VRLGSLISAFVYKFKSCYDFIS---CNSLKYGSVRDVISGEVSLINLPPIDSNKVINRAY 191
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ +D KKL I+N V +L + GE+ I E
Sbjct: 192 YR--------LDVKKLAINNKLVEILELDNGEIAIFE 220
>sp|A6ZPZ1|YJ00_YEAS7 UPF0508 protein SCY_2952 OS=Saccharomyces cerevisiae (strain
YJM789) GN=SCY_2952 PE=3 SV=1
Length = 840
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 152 VYVGSLLGVSDGIMKRVSDFISEFQCGDL-FWSINGMGAPDLGVIYVP--AGCKVENPIY 208
V +GSL+ K DFIS C L + S+ + + ++ +I +P KV N Y
Sbjct: 135 VRLGSLISAFVYKFKSCYDFIS---CNSLKYGSVRDVISGEVSLINLPPIDSNKVINRAY 191
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIE 245
+ +D KKL I+N V +L + GE+ I E
Sbjct: 192 YR--------LDVKKLAINNKLVEILELDNGEIAIFE 220
>sp|Q8IZC6|CORA1_HUMAN Collagen alpha-1(XXVII) chain OS=Homo sapiens GN=COL27A1 PE=2 SV=1
Length = 1860
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 63 SSSSLPQPLPLQKLRDSSSQTLLSTPWPSRKDEPFRFTDTSMIKSSQIQPITRP 116
+++ +P+ LP + S+S + +P P++K P FT +++ Q+ P +RP
Sbjct: 360 TATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRP 413
>sp|Q2YWN2|Y778_STAAB UPF0051 protein SAB0778 OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=SAB0778 PE=3 SV=1
Length = 465
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q5HHG8|Y918_STAAC UPF0051 protein SACOL0918 OS=Staphylococcus aureus (strain COL)
GN=SACOL0918 PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q2FZY3|Y851_STAA8 UPF0051 protein SAOUHSC_00851 OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_00851 PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q99VF9|Y846_STAAM UPF0051 protein SAV0846 OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=SAV0846 PE=1 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q2FIF6|Y822_STAA3 UPF0051 protein SAUSA300_0822 OS=Staphylococcus aureus (strain
USA300) GN=SAUSA300_0822 PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q7A1E0|Y799_STAAW UPF0051 protein MW0799 OS=Staphylococcus aureus (strain MW2)
GN=MW0799 PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q6GB09|Y788_STAAS UPF0051 protein SAS0788 OS=Staphylococcus aureus (strain MSSA476)
GN=SAS0788 PE=3 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q7A6L4|Y778_STAAN UPF0051 protein SA0778 OS=Staphylococcus aureus (strain N315)
GN=SA0778 PE=1 SV=1
Length = 465
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 195 IYVPAGCKVENPIYLKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVGKEGND 254
IYVP K++ P+ Y + N+ + R +++ +EG V +E
Sbjct: 186 IYVPKNIKLDTPL-QAYFRINSENMGQFE------RTLIIADEGASVHYVEGCTAPVYTT 238
Query: 255 CYWANSVLEVVIGKGGKVRHSYLQNQSLNAAHI 287
++V+E+++ K VR++ +QN + N ++
Sbjct: 239 SSLHSAVVEIIVHKDAHVRYTTIQNWANNVYNL 271
>sp|Q5UP12|YR847_MIMIV Putative ankyrin repeat protein R847 (Fragment) OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R847 PE=4 SV=1
Length = 147
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 17/77 (22%)
Query: 209 LKYLSVEGGNVDSKKLPISNPRVVVLVEEGGEVGIIEEFVG-----KEGNDC--YWAN-- 259
+KYL +G N+ +K N R V+L E G + +++ V + NDC WA+
Sbjct: 19 VKYLVSQGANIRAK-----NDRAVILASENGHLDVVKYLVVLGVNIRVDNDCAIRWASLH 73
Query: 260 ---SVLEVVIGKGGKVR 273
V++ ++ +G +R
Sbjct: 74 GHLEVVKYLVSQGANIR 90
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,801,058
Number of Sequences: 539616
Number of extensions: 4984796
Number of successful extensions: 13334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 13277
Number of HSP's gapped (non-prelim): 82
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)