Your job contains 1 sequence.
>022239
MKKKLPLFALFLFFFSLLLFCHSSLAFESDELLVDDEEFGLEGGSKPQIKPHEPAPTRST
TTTTRRKVSDQDSDSKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAF
TGEDKEKFEKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKARCLPREGLDEHFVIHMEGV
NILAVNYGAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAPRAPIFAEEVLGENGEGEIIP
PPERSFWAKYWMYLIPLGLIVINAVTQAMNMPEEGVQGGGQTQQSAAAIQRGTGSAVRRR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022239
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206270 - symbol:AT1G65270 "AT1G65270" species... 862 3.3e-86 1
UNIPROTKB|A5D8P8 - symbol:emc10 "ER membrane protein comp... 143 5.9e-08 1
UNIPROTKB|Q6P7K5 - symbol:emc10 "ER membrane protein comp... 139 1.7e-07 1
UNIPROTKB|A1A4M2 - symbol:EMC10 "ER membrane protein comp... 123 1.5e-05 1
UNIPROTKB|F1RH16 - symbol:EMC10 "Uncharacterized protein"... 118 6.1e-05 1
UNIPROTKB|Q5UCC4 - symbol:EMC10 "ER membrane protein comp... 115 0.00014 1
ZFIN|ZDB-GENE-030131-9045 - symbol:emc10 "ER membrane pro... 113 0.00022 1
MGI|MGI:1916933 - symbol:Emc10 "ER membrane protein compl... 109 0.00067 1
RGD|1303214 - symbol:Emc10 "ER membrane protein complex s... 109 0.00067 1
>TAIR|locus:2206270 [details] [associations]
symbol:AT1G65270 "AT1G65270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005774 EMBL:AC004512 EMBL:BT002430 EMBL:BT006319
EMBL:AK316936 EMBL:AK316997 IPI:IPI00544929 PIR:T02349
RefSeq:NP_564847.1 RefSeq:NP_849845.1 RefSeq:NP_974093.1
UniGene:At.23170 PaxDb:O80798 PRIDE:O80798
EnsemblPlants:AT1G65270.1 EnsemblPlants:AT1G65270.2
EnsemblPlants:AT1G65270.3 GeneID:842834 KEGG:ath:AT1G65270
TAIR:At1g65270 eggNOG:NOG260402 HOGENOM:HOG000243752
InParanoid:O80798 OMA:DDFYRIR PhylomeDB:O80798
ProtClustDB:CLSN2689029 ArrayExpress:O80798 Genevestigator:O80798
Uniprot:O80798
Length = 292
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 170/254 (66%), Positives = 198/254 (77%)
Query: 28 ESDELLVDDEEFGLEGGSKPQ----IKPHEPAPXXXXXX-XXXXKVSDQ-DSDSKIQFSL 81
+SDELLVDD+EFGLEG +KP+ +P + SD D DSK+QF+L
Sbjct: 22 QSDELLVDDDEFGLEG-AKPRSTDLYTSSSSSPQQQQQTPTIRRRYSDPTDLDSKVQFTL 80
Query: 82 EHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRIR 141
EHAFGDSDF PAGTFSARLKT SHGG+TLTKLRFSRN F+ E+K+ F+ LL+ DDFYRIR
Sbjct: 81 EHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAFKNLLKGDDFYRIR 140
Query: 142 LPSNTVSPPGRDYIISSVKARCLPREGLDEHFVIHMEGVNILAVNYGAFGACSYPRQLKL 201
LPSN VSPPGR+++I+SV+ARCLPR+GLDEHF+IHMEG NILAV+YG+ GAC YPRQLKL
Sbjct: 141 LPSNVVSPPGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVSYGSPGACQYPRQLKL 200
Query: 202 PHKWSFNSHTVLKNSEQAPRAPIFAEEVLXXXXXXXXXXXX-XRSFWAKYWMYLIPLGLI 260
P KWSFNSHT+LK+SEQAPR PIF EE+L RSFWAKYWMYLIPLGL+
Sbjct: 201 PAKWSFNSHTILKSSEQAPRTPIFTEEILGSENVEGEVEPPPERSFWAKYWMYLIPLGLV 260
Query: 261 VINAVTQAMNMPEE 274
V+NAVTQA NM EE
Sbjct: 261 VMNAVTQASNMAEE 274
>UNIPROTKB|A5D8P8 [details] [associations]
symbol:emc10 "ER membrane protein complex subunit 10"
species:8355 "Xenopus laevis" [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0072546 "ER membrane protein complex"
evidence=ISS] CTD:284361 GO:GO:0072546 EMBL:BC141763
RefSeq:NP_001092176.1 UniGene:Xl.85931 GeneID:100049769
KEGG:xla:100049769 Xenbase:XB-GENE-6078962 Uniprot:A5D8P8
Length = 267
Score = 143 (55.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 67 KVSD-QDSDS-KIQFSLEHAF--GDS-DFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFT 121
K D ++S+S LEH+F DS DF G+ L S Q+++ L+ T
Sbjct: 46 KTGDGRESESCGTNLELEHSFELDDSIDFKKRGS----LFWSGTAEQSISILQ---KQLT 98
Query: 122 GEDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKARCLPREGLDEHFVIHME-G 179
+++ K + + YRIR+P +S +Y+ S V+A + L + +H +
Sbjct: 99 EDERNKLRDIANLNGLYRIRIPRKLGISEEVNEYVTSFVRACSMVESHLSDEITVHTDIS 158
Query: 180 VNILAVNYGAF-GACSYPRQLKLPHKWSFNS--HTVLKNSEQAPRAPIFAEEVLXXXXXX 236
N++ V+ F G+C+ +++ FN+ H + P F E +
Sbjct: 159 GNVIGVSIVTFPGSCN-GAEVEDVDLEMFNTTVHIQQPIAAAVPETAAFIERLEMEQAQK 217
Query: 237 XXXXXXXRSFWAKYWMYLIPLGL-IVINAVTQAMN 270
+SF+AKYWMY+IP+ L ++++ + A N
Sbjct: 218 AKNPQEQKSFFAKYWMYIIPVVLFLMMSGASDAGN 252
>UNIPROTKB|Q6P7K5 [details] [associations]
symbol:emc10 "ER membrane protein complex subunit 10"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0016021 "integral
to membrane" evidence=ISS] [GO:0072546 "ER membrane protein
complex" evidence=ISS] CTD:284361 GeneTree:ENSGT00390000004520
OMA:LSQRQLN GO:GO:0072546 eggNOG:NOG310637 HOGENOM:HOG000111998
OrthoDB:EOG4D7Z6V EMBL:CR760224 EMBL:CR760298 EMBL:BC061625
RefSeq:NP_988902.1 UniGene:Str.936 Ensembl:ENSXETT00000053654
GeneID:394497 KEGG:xtr:394497 Xenbase:XB-GENE-5788294
InParanoid:Q6P7K5 Bgee:Q6P7K5 Uniprot:Q6P7K5
Length = 263
Score = 139 (54.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 67 KVSD-QDSDS-KIQFSLEHAFGDSDFVPAGTFSAR--LKTSSHGGQTLTKLRFSRNAFTG 122
K D +DS+S LEH+F D + F R L S Q+++ L+ T
Sbjct: 42 KTGDGRDSESCGTNLELEHSFELDDSIH---FKKRGSLIWSGTAEQSISILQ---KQLTE 95
Query: 123 EDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKARCLPREGLDEHFVIHME-GV 180
+++ K + + YRIR+P ++ +Y+ S V+A + L + +H +
Sbjct: 96 DERNKLRDIANLNGLYRIRVPRKLGITEEANEYVTSFVRACSMVESHLSDQISVHTDISG 155
Query: 181 NILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKNSEQA--PRAPIFAEEVLXXXXXXX 237
N++ ++ F G+C+ +++ FN+ ++ A P F E +
Sbjct: 156 NVVGISIVTFPGSCN-GAEVEDVDLEMFNTTVYIQQPIAAAVPETAAFIERLEMEQAQKA 214
Query: 238 XXXXXXRSFWAKYWMYLIPLGL-IVINAVTQAMN 270
+SF+AKYWMY+IP+ L ++++ + A N
Sbjct: 215 KNPQEQKSFFAKYWMYIIPVVLFLMMSGASDAGN 248
>UNIPROTKB|A1A4M2 [details] [associations]
symbol:EMC10 "ER membrane protein complex subunit 10"
species:9913 "Bos taurus" [GO:0072546 "ER membrane protein complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=ISS]
EMBL:BC123856 EMBL:BC126720 IPI:IPI00693799 RefSeq:NP_001073708.1
UniGene:Bt.4136 Ensembl:ENSBTAT00000064928 GeneID:507692
KEGG:bta:507692 CTD:284361 GeneTree:ENSGT00390000004520 OMA:LSQRQLN
NextBio:20868177 GO:GO:0072546 Uniprot:A1A4M2
Length = 262
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/189 (24%), Positives = 81/189 (42%)
Query: 81 LEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRI 140
LEH+F D + F R + S Q L S+ E++ + + + YR+
Sbjct: 56 LEHSFEIDD---SAHF--RKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNGLYRV 110
Query: 141 RLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHMEGV-NILAVNYGAF-GACSY 195
R+P +P G + Y+ S V A L L + +H++ N++ V+ + G C
Sbjct: 111 RVPRRPGAPDGPEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTYPGGCR- 169
Query: 196 PRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLXXXXXXXXXXXXXRSFWAKYWMY 253
+++ FN+ L+ AP F E + +SF+AKYWMY
Sbjct: 170 GHEVEDVDLELFNTSVQLQPPVTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMY 229
Query: 254 LIPLGLIVI 262
++P+ L ++
Sbjct: 230 IVPVVLFLM 238
>UNIPROTKB|F1RH16 [details] [associations]
symbol:EMC10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072546 "ER membrane protein complex" evidence=IEA]
GeneTree:ENSGT00390000004520 OMA:LSQRQLN GO:GO:0072546
EMBL:FP102476 RefSeq:XP_003127414.1 Ensembl:ENSSSCT00000028973
GeneID:100526111 KEGG:ssc:100526111 Uniprot:F1RH16
Length = 262
Score = 118 (46.6 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 81 LEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRI 140
LEH+F D + F R + S Q L S+ E++ + + + YR+
Sbjct: 56 LEHSFEIDD---SAHF--RKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNGVYRV 110
Query: 141 RLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHMEGV-NILAVNYGAF-GACSY 195
R+P +P G + Y+ S V A L L + +H++ N++ V+ G C
Sbjct: 111 RVPRRPGAPDGPESGGYVSSFVPACSLLESHLSDQLTLHVDVAGNVVGVSVVTHPGGCR- 169
Query: 196 PRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLXXXXXXXXXXXXXRSFWAKYWMY 253
+++ FN+ L+ AP F E + +SF+AKYWMY
Sbjct: 170 GHEVEDVDLELFNTSVQLQPPVPAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMY 229
Query: 254 LIPLGLIVI 262
+IP+ L ++
Sbjct: 230 IIPVVLFLM 238
>UNIPROTKB|Q5UCC4 [details] [associations]
symbol:EMC10 "ER membrane protein complex subunit 10"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] [GO:0072546 "ER membrane protein complex"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IDA]
GO:GO:0005576 EMBL:CH471135 CTD:284361 OMA:LSQRQLN GO:GO:0072546
EMBL:AY194293 EMBL:AY761095 EMBL:AY761097 EMBL:BC032948
EMBL:BC035001 EMBL:AY358710 EMBL:AL512761 IPI:IPI00384722
IPI:IPI00419642 IPI:IPI00880178 RefSeq:NP_778233.4
RefSeq:NP_996261.1 UniGene:Hs.448941 UniGene:Hs.515550
ProteinModelPortal:Q5UCC4 STRING:Q5UCC4 PhosphoSite:Q5UCC4
DMDM:74708213 PaxDb:Q5UCC4 PRIDE:Q5UCC4 Ensembl:ENST00000334976
Ensembl:ENST00000376918 GeneID:284361 KEGG:hsa:284361
UCSC:uc002psk.3 UCSC:uc002psl.3 GeneCards:GC19P050980
HGNC:HGNC:27609 MIM:614545 neXtProt:NX_Q5UCC4 PharmGKB:PA162378790
eggNOG:NOG310637 HOGENOM:HOG000111998 InParanoid:Q5UCC4
OrthoDB:EOG4D7Z6V PhylomeDB:Q5UCC4 GenomeRNAi:284361 NextBio:94781
Bgee:Q5UCC4 CleanEx:HS_C19orf63 Genevestigator:Q5UCC4
Uniprot:Q5UCC4
Length = 262
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 46/189 (24%), Positives = 80/189 (42%)
Query: 81 LEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRI 140
LEH+F D + F R + S Q L S+ + E++ + + + YR+
Sbjct: 56 LEHSFEIDD---SANF--RKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNGLYRV 110
Query: 141 RLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHMEGV-NILAVNYGAF-GACSY 195
R+P + G + Y+ S V A L L + +H++ N++ V+ G C
Sbjct: 111 RIPRRPGALDGLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCR- 169
Query: 196 PRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLXXXXXXXXXXXXXRSFWAKYWMY 253
+++ FN+ L+ AP F E + +SF+AKYWMY
Sbjct: 170 GHEVEDVDLELFNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMY 229
Query: 254 LIPLGLIVI 262
+IP+ L ++
Sbjct: 230 IIPVVLFLM 238
>ZFIN|ZDB-GENE-030131-9045 [details] [associations]
symbol:emc10 "ER membrane protein complex subunit
10" species:7955 "Danio rerio" [GO:0016021 "integral to membrane"
evidence=IEA;ISS] [GO:0072546 "ER membrane protein complex"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA]
ZFIN:ZDB-GENE-030131-9045 CTD:284361 GeneTree:ENSGT00390000004520
OMA:LSQRQLN EMBL:BX649540 IPI:IPI01016859 RefSeq:NP_001095859.2
UniGene:Dr.76347 Ensembl:ENSDART00000077029 GeneID:565829
KEGG:dre:565829 NextBio:20887511 ArrayExpress:F1QB44 Bgee:F1QB44
Uniprot:F1QB44
Length = 257
Score = 113 (44.8 bits), Expect = 0.00022, P = 0.00022
Identities = 52/212 (24%), Positives = 91/212 (42%)
Query: 72 DSD-SKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEK 130
D+D S LEH+F + D VP F R GG+ + S+N + +D+ +
Sbjct: 38 DTDFSGFSVPLEHSF-EVDDVPR--FRLRGALQFRGGRE-NSVYLSQNQLSEKDRNTLKD 93
Query: 131 LLQDDDFYRIRLPSNTVSPPGRD------YIISSVKARCLPREGLDEHFVIHME------ 178
+ D YRIR+P ++ + Y+ + V+A L L + +H +
Sbjct: 94 VAAVDGLYRIRVPRVSLQVDRQTERQYEGYLTAFVRACALVESHLSDVITLHTDVSGYVI 153
Query: 179 GVNILAVNYGAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAP---RAPIFAEEVLXXXXX 235
G++I+ + G+ ++ L FN+ + AP AP + E +
Sbjct: 154 GISIVTIP-GSCRGIEVEDEVDLE---VFNTTISVMAPVTAPVPETAP-YIERMEMEMEK 208
Query: 236 XXXXXXXXRSFWAKYWMYLIPLGLIVINAVTQ 267
+SF+AKYWMY++PL L ++ + Q
Sbjct: 209 KGKNPQEQKSFFAKYWMYIVPLVLFLMMSGAQ 240
>MGI|MGI:1916933 [details] [associations]
symbol:Emc10 "ER membrane protein complex subunit 10"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0072546 "ER membrane protein complex"
evidence=ISO] MGI:MGI:1916933 GO:GO:0005576 CTD:284361
GeneTree:ENSGT00390000004520 GO:GO:0072546 eggNOG:NOG310637
HOGENOM:HOG000111998 OrthoDB:EOG4D7Z6V EMBL:AY761096 EMBL:AY761098
EMBL:AK169010 EMBL:AK171657 EMBL:BC006065 EMBL:BC020179
IPI:IPI00381357 IPI:IPI00480280 RefSeq:NP_932108.2
UniGene:Mm.294759 PhosphoSite:Q3TAS6 PaxDb:Q3TAS6 PRIDE:Q3TAS6
Ensembl:ENSMUST00000008284 Ensembl:ENSMUST00000118515
Ensembl:ENSMUST00000118808 GeneID:69683 KEGG:mmu:69683
UCSC:uc009gpq.2 UCSC:uc012fjp.1 InParanoid:Q3TAS6 NextBio:330078
Bgee:Q3TAS6 CleanEx:MM_2310044H10RIK Genevestigator:Q3TAS6
Uniprot:Q3TAS6
Length = 258
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 81 LEHAF--GD-SDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDF 137
LEH+F GD ++F G L G + T+ + S E++ + + +
Sbjct: 56 LEHSFELGDGANFQKRGLL---LWNQQDGTLSATQRQLSE-----EERGRLRDVAAVNGL 107
Query: 138 YRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHMEGV-NILAVNYGAF-GA 192
YR+R+P + G + ++ S V A L L + +H++ N++ ++ + G
Sbjct: 108 YRVRVPRRPGTLDGSEAGGHVSSFVPACSLVESHLSDQLTLHVDVAGNVVGLSVVVYPGG 167
Query: 193 CSYPRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLXXXXXXXXXXXXXRSFWAKY 250
C +++ FN+ L+ AP F E + +SF+AKY
Sbjct: 168 CR-GSEVEDEDLELFNTSVQLRPPSTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKY 226
Query: 251 WMYLIPLGLIVI 262
WMY+IP+ L ++
Sbjct: 227 WMYIIPVVLFLM 238
>RGD|1303214 [details] [associations]
symbol:Emc10 "ER membrane protein complex subunit 10"
species:10116 "Rattus norvegicus" [GO:0016021 "integral to
membrane" evidence=ISO;ISS] [GO:0072546 "ER membrane protein
complex" evidence=ISO;ISS] RGD:1303214 CTD:284361
GeneTree:ENSGT00390000004520 GO:GO:0072546 eggNOG:NOG310637
HOGENOM:HOG000111998 OrthoDB:EOG4D7Z6V EMBL:BC079041
IPI:IPI00364333 RefSeq:NP_001004221.1 UniGene:Rn.1470 PRIDE:Q6AYH6
Ensembl:ENSRNOT00000026445 GeneID:292878 KEGG:rno:292878
UCSC:RGD:1303214 InParanoid:Q6AYH6 NextBio:634972
ArrayExpress:Q6AYH6 Genevestigator:Q6AYH6 Uniprot:Q6AYH6
Length = 258
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 44/192 (22%), Positives = 84/192 (43%)
Query: 81 LEHAF--GD-SDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDF 137
LEH+F GD ++F G+ L G + T+ + S E++ + + +
Sbjct: 56 LEHSFEIGDGANFQKRGSL---LWNQQDGTLSATQRQLSE-----EERGRLRDVAAVNGL 107
Query: 138 YRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHMEGV-NILAVNYGAF-GA 192
YR+R+P + G + ++ S V A L L + +H++ N++ ++ + G
Sbjct: 108 YRVRVPRRPGTLDGSEAGGHVSSFVPACSLVESHLSDQLTLHVDVAGNVVGLSVVVYPGG 167
Query: 193 CSYPRQLKLPHKWSFNSHTVLK--NSEQAPRAPIFAEEVLXXXXXXXXXXXXXRSFWAKY 250
C +++ FN+ L+ + P F E + +SF+AKY
Sbjct: 168 CR-GSEVEDEDLELFNTSVHLRPPGTAPGPETAAFIERLEMEQAQKAKNPQEQKSFFAKY 226
Query: 251 WMYLIPLGLIVI 262
WMY+IP+ L ++
Sbjct: 227 WMYIIPVVLFLM 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 246 0.0010 113 3 11 22 0.46 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 599 (64 KB)
Total size of DFA: 190 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.89u 0.28s 20.17t Elapsed: 00:00:00
Total cpu time: 19.89u 0.28s 20.17t Elapsed: 00:00:00
Start: Sat May 11 11:49:18 2013 End: Sat May 11 11:49:18 2013