BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022239
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P7K5|EMC10_XENTR ER membrane protein complex subunit 10 OS=Xenopus tropicalis
GN=emc10 PE=2 SV=1
Length = 263
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 62 TTTRRKVSD-QDSDS-KIQFSLEHAFGDSDFVPAGTFSAR--LKTSSHGGQTLTKLRFSR 117
+ R K D +DS+S LEH+F D + F R L S Q+++ L+
Sbjct: 37 SVCRLKTGDGRDSESCGTNLELEHSFELDDSIH---FKKRGSLIWSGTAEQSISILQ--- 90
Query: 118 NAFTGEDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKARCLPREGLDEHFVIH 176
T +++ K + + YRIR+P ++ +Y+ S V+A + L + +H
Sbjct: 91 KQLTEDERNKLRDIANLNGLYRIRVPRKLGITEEANEYVTSFVRACSMVESHLSDQISVH 150
Query: 177 ME-GVNILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKN--SEQAPRAPIFAEEVLGE 232
+ N++ ++ F G+C+ + + FN+ ++ + P F E + E
Sbjct: 151 TDISGNVVGISIVTFPGSCNGAEVEDVDLEM-FNTTVYIQQPIAAAVPETAAFIERLEME 209
Query: 233 NGEGEIIPPPERSFWAKYWMYLIPLGLIVI 262
+ P ++SF+AKYWMY+IP+ L ++
Sbjct: 210 QAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 239
>sp|A5D8P8|EMC10_XENLA ER membrane protein complex subunit 10 OS=Xenopus laevis GN=emc10
PE=2 SV=1
Length = 267
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 62 TTTRRKVSD-QDSDS-KIQFSLEHAF--GDS-DFVPAGTFSARLKTSSHGGQTLTKLRFS 116
+ R K D ++S+S LEH+F DS DF G+ L S Q+++ L+
Sbjct: 41 SVCRLKTGDGRESESCGTNLELEHSFELDDSIDFKKRGS----LFWSGTAEQSISILQ-- 94
Query: 117 RNAFTGEDKEKFEKLLQDDDFYRIRLPSNT-VSPPGRDYIISSVKARCLPREGLDEHFVI 175
T +++ K + + YRIR+P +S +Y+ S V+A + L + +
Sbjct: 95 -KQLTEDERNKLRDIANLNGLYRIRIPRKLGISEEVNEYVTSFVRACSMVESHLSDEITV 153
Query: 176 HME-GVNILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKN--SEQAPRAPIFAEEVLG 231
H + N++ V+ F G+C+ + + FN+ ++ + P F E +
Sbjct: 154 HTDISGNVIGVSIVTFPGSCNGAEVEDVDLEM-FNTTVHIQQPIAAAVPETAAFIERLEM 212
Query: 232 ENGEGEIIPPPERSFWAKYWMYLIPLGLIVI 262
E + P ++SF+AKYWMY+IP+ L ++
Sbjct: 213 EQAQKAKNPQEQKSFFAKYWMYIIPVVLFLM 243
>sp|A1A4M2|EMC10_BOVIN ER membrane protein complex subunit 10 OS=Bos taurus GN=EMC10 PE=2
SV=1
Length = 262
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 77 IQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDD 136
+ LEH+F D + R + S Q L S+ E++ + + +
Sbjct: 52 VGLLLEHSFEIDD-----SAHFRKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNG 106
Query: 137 FYRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHME------GVNILAVNY 187
YR+R+P +P G + Y+ S V A L L + +H++ GV+++
Sbjct: 107 LYRVRVPRRPGAPDGPEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTYPG 166
Query: 188 GAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAP--RAPIFAEEVLGENGEGEIIPPPERS 245
G G L+L FN+ L+ AP F E + E + P ++S
Sbjct: 167 GCRGHEVEDVDLEL-----FNTSVQLQPPVTAPGPETAAFIERLEMEQAQKAKNPQEQKS 221
Query: 246 FWAKYWMYLIPLGLIVI 262
F+AKYWMY++P+ L ++
Sbjct: 222 FFAKYWMYIVPVVLFLM 238
>sp|Q5UCC4|EMC10_HUMAN ER membrane protein complex subunit 10 OS=Homo sapiens GN=EMC10
PE=1 SV=1
Length = 262
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 77 IQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDD 136
+ LEH+F D + + R + S Q L S+ + E++ + + +
Sbjct: 52 VGLLLEHSFEIDD-----SANFRKRGSLLWNQQDGTLSLSQRQLSEEERGRLRDVAALNG 106
Query: 137 FYRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHME------GVNILAVNY 187
YR+R+P + G + Y+ S V A L L + +H++ GV+++
Sbjct: 107 LYRVRIPRRPGALDGLEAGGYVSSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPG 166
Query: 188 GAFGACSYPRQLKLPHKWSFNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPPERS 245
G G L+L FN+ L+ + P F E + E + P ++S
Sbjct: 167 GCRGHEVEDVDLEL-----FNTSVQLQPPTTAPGPETAAFIERLEMEQAQKAKNPQEQKS 221
Query: 246 FWAKYWMYLIPLGLIVI 262
F+AKYWMY+IP+ L ++
Sbjct: 222 FFAKYWMYIIPVVLFLM 238
>sp|A7E2M3|EMC10_DANRE ER membrane protein complex subunit 10 OS=Danio rerio GN=emc10 PE=2
SV=1
Length = 257
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 65 RRKVSDQDSD-SKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGE 123
RR D+D S LEH+F + D VP F R GG+ + S+N + +
Sbjct: 31 RRSGDAVDTDFSGFSVPLEHSF-EVDDVP--RFRLRGALQFRGGRE-NSVYLSQNQLSEK 86
Query: 124 DKEKFEKLLQDDDFYRIRLPSNTVSPPGRD------YIISSVKARCLPREGLDEHFVIHM 177
D+ + + D YRIR+P ++ + Y+ + V+A L L + +H
Sbjct: 87 DRNTLKDVAAVDGLYRIRVPRVSLQVDRQTERQYEGYLTAFVRACALVESHLSDVITLHT 146
Query: 178 E------GVNILAVNYGAFGACSYPRQLKLPHKWS---FNSHTVLKNSEQAP---RAPIF 225
+ G++I+ + G+C R +++ + FN+ + AP AP +
Sbjct: 147 DVSGYVIGISIVTIP----GSC---RGIEVEDEVDLEVFNTTISVMAPVTAPVPETAP-Y 198
Query: 226 AEEVLGENGEGEIIPPPERSFWAKYWMYLIPLGLIVINAVTQ 267
E + E + P ++SF+AKYWMY++PL L ++ + Q
Sbjct: 199 IERMEMEMEKKGKNPQEQKSFFAKYWMYIVPLVLFLMMSGAQ 240
>sp|Q6AYH6|EMC10_RAT ER membrane protein complex subunit 10 OS=Rattus norvegicus
GN=Emc10 PE=1 SV=1
Length = 258
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 77 IQFSLEHAF--GD-SDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQ 133
+ LEH+F GD ++F G+ L G + T+ + S E++ + +
Sbjct: 52 VALLLEHSFEIGDGANFQKRGSL---LWNQQDGTLSATQRQLSE-----EERGRLRDVAA 103
Query: 134 DDDFYRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHME------GVNILA 184
+ YR+R+P + G + ++ S V A L L + +H++ G++++
Sbjct: 104 VNGLYRVRVPRRPGTLDGSEAGGHVSSFVPACSLVESHLSDQLTLHVDVAGNVVGLSVVV 163
Query: 185 VNYGAFGACSYPRQLKLPHKWSFNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPP 242
G G+ L+L FN+ L+ + P F E + E + P
Sbjct: 164 YPGGCRGSEVEDEDLEL-----FNTSVHLRPPGTAPGPETAAFIERLEMEQAQKAKNPQE 218
Query: 243 ERSFWAKYWMYLIPLGLIVI 262
++SF+AKYWMY+IP+ L ++
Sbjct: 219 QKSFFAKYWMYIIPVVLFLM 238
>sp|Q3TAS6|EMC10_MOUSE ER membrane protein complex subunit 10 OS=Mus musculus GN=Emc10
PE=2 SV=2
Length = 258
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 77 IQFSLEHAF--GD-SDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQ 133
+ LEH+F GD ++F G L G + T+ + S E++ + +
Sbjct: 52 VALLLEHSFELGDGANFQKRGLL---LWNQQDGTLSATQRQLSE-----EERGRLRDVAA 103
Query: 134 DDDFYRIRLPSNTVSPPGRD---YIISSVKARCLPREGLDEHFVIHME------GVNILA 184
+ YR+R+P + G + ++ S V A L L + +H++ G++++
Sbjct: 104 VNGLYRVRVPRRPGTLDGSEAGGHVSSFVPACSLVESHLSDQLTLHVDVAGNVVGLSVVV 163
Query: 185 VNYGAFGACSYPRQLKLPHKWSFNSHTVLK--NSEQAPRAPIFAEEVLGENGEGEIIPPP 242
G G+ L+L FN+ L+ ++ P F E + E + P
Sbjct: 164 YPGGCRGSEVEDEDLEL-----FNTSVQLRPPSTAPGPETAAFIERLEMEQAQKAKNPQE 218
Query: 243 ERSFWAKYWMYLIPLGLIVI 262
++SF+AKYWMY+IP+ L ++
Sbjct: 219 QKSFFAKYWMYIIPVVLFLM 238
>sp|Q313R2|MRAZ_DESDG Protein MraZ OS=Desulfovibrio desulfuricans (strain G20) GN=mraZ
PE=3 SV=1
Length = 149
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 90 FVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRIRLPSNTVSP 149
+P A L S G +LT A+T ED EKFE F RI+ PS +
Sbjct: 18 MLPPEVRDALLAVSPEGRVSLTTFDGCLVAYTPEDWEKFEA-----GFARIKNPSRKM-- 70
Query: 150 PGRDY---IISSVKARCLPREGLDEHFVIHMEGVNI 182
RD+ +I V+ C+ ++G + HME I
Sbjct: 71 --RDFRRLVIGGVEELCVDKQGRVKLSRAHMEYAGI 104
>sp|A1TI06|SYL_MYCVP Leucine--tRNA ligase OS=Mycobacterium vanbaalenii (strain DSM 7251
/ PYR-1) GN=leuS PE=3 SV=1
Length = 968
Score = 32.3 bits (72), Expect = 4.6, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 215 NSEQAPRAPIF-AEEVLGENGEGEIIPPPERSFWAKYWMYLIPLGLIVINAVTQAMNMPE 273
N A + P+F A+ VL G G I+ P + W + GL +I V + P
Sbjct: 406 NPANAKQVPVFIADYVLAGYGTGAIMAVPGGD--QRDWDFATEFGLPIIEVVRPVADRPG 463
Query: 274 EGVQGGGQTQQSA 286
E GG Q+A
Sbjct: 464 EDTGAGGDVSQAA 476
>sp|Q5RFD6|CBPM_PONAB Carboxypeptidase M OS=Pongo abelii GN=CPM PE=2 SV=1
Length = 443
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 190 FGACSYPRQLKLPHKWSFNSHTVLKNSEQA---PRAPIFAE------EVLGENGEGEIIP 240
C YPR+ KLP W+ N ++++ +Q + +F + +V+ E + + I
Sbjct: 282 LSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPDVIVEVQDRKHIC 341
Query: 241 PPERSFWAKYWMYLIPLGLIVINAVT 266
P + + +Y++ L+P G +IN
Sbjct: 342 PYRTNKYGEYYLLLLP-GSYIINVTV 366
>sp|P14384|CBPM_HUMAN Carboxypeptidase M OS=Homo sapiens GN=CPM PE=1 SV=2
Length = 443
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 190 FGACSYPRQLKLPHKWSFNSHTVLKNSEQA---PRAPIFAE------EVLGENGEGEIIP 240
C YPR+ KLP W+ N ++++ +Q + +F + V+ E + + I
Sbjct: 282 LSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPNVIVEVQDRKHIC 341
Query: 241 PPERSFWAKYWMYLIPLGLIVINAVT 266
P + + +Y++ L+P G +IN
Sbjct: 342 PYRTNKYGEYYLLLLP-GSYIINVTV 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,006,992
Number of Sequences: 539616
Number of extensions: 5357390
Number of successful extensions: 12110
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 12100
Number of HSP's gapped (non-prelim): 18
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)