Query 022243
Match_columns 300
No_of_seqs 126 out of 1232
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:16:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p8k_A Hydrolase, carbon-nitro 100.0 1.3E-54 4.4E-59 381.0 25.1 261 4-288 16-281 (281)
2 3hkx_A Amidase; alpha-beta-BET 100.0 8.5E-55 2.9E-59 382.5 19.0 264 4-291 16-283 (283)
3 3ivz_A Nitrilase; alpha-beta s 100.0 7.1E-54 2.4E-58 372.8 24.3 256 9-288 2-261 (262)
4 1f89_A 32.5 kDa protein YLR351 100.0 2.3E-52 8E-57 368.7 25.8 269 3-290 5-288 (291)
5 2w1v_A Nitrilase-2, nitrilase 100.0 2.9E-52 9.9E-57 365.4 24.8 263 8-290 3-272 (276)
6 2vhh_A CG3027-PA; hydrolase; 2 100.0 1.9E-51 6.4E-56 377.1 25.7 282 5-292 69-371 (405)
7 1uf5_A N-carbamyl-D-amino acid 100.0 2.9E-51 9.8E-56 363.7 25.4 278 7-292 2-302 (303)
8 2e11_A Hydrolase; dimethylarse 100.0 9.9E-52 3.4E-56 360.1 18.6 255 8-288 3-265 (266)
9 1ems_A Nitfhit, NIT-fragIle hi 100.0 9.4E-49 3.2E-53 364.4 18.6 267 7-292 13-290 (440)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 1.6E-46 5.4E-51 337.0 26.7 252 7-281 12-275 (334)
11 2uxy_A Aliphatic amidase; nitr 100.0 2.6E-46 8.8E-51 336.3 26.4 249 7-279 11-273 (341)
12 4f4h_A Glutamine dependent NAD 100.0 3.8E-46 1.3E-50 354.2 22.9 241 5-268 3-267 (565)
13 3n05_A NH(3)-dependent NAD(+) 100.0 5.5E-46 1.9E-50 356.3 22.1 243 5-270 1-264 (590)
14 3ilv_A Glutamine-dependent NAD 100.0 3.9E-45 1.3E-49 352.0 21.6 250 8-277 5-276 (634)
15 3sdb_A Glutamine-dependent NAD 100.0 1.3E-44 4.6E-49 350.0 21.5 259 7-284 11-295 (680)
16 3hkx_A Amidase; alpha-beta-BET 79.5 5.7 0.00019 33.5 7.5 70 32-118 173-244 (283)
17 3obe_A Sugar phosphate isomera 76.2 10 0.00035 32.2 8.2 73 9-92 90-168 (305)
18 3p8k_A Hydrolase, carbon-nitro 75.0 8.5 0.00029 32.4 7.3 67 35-118 177-245 (281)
19 1f89_A 32.5 kDa protein YLR351 72.7 7.6 0.00026 32.7 6.5 68 34-117 179-249 (291)
20 3ivz_A Nitrilase; alpha-beta s 72.5 11 0.00036 31.3 7.3 66 33-118 155-222 (262)
21 3ngf_A AP endonuclease, family 69.8 27 0.00093 28.6 9.3 61 22-92 88-149 (269)
22 2dyu_A Formamidase; AMIF, CEK, 69.8 17 0.00057 31.5 8.1 69 32-117 174-244 (334)
23 2uxy_A Aliphatic amidase; nitr 69.2 12 0.00041 32.5 7.1 69 32-117 174-244 (341)
24 2w1v_A Nitrilase-2, nitrilase 67.7 12 0.0004 31.3 6.5 68 34-117 163-233 (276)
25 4fva_A 5'-tyrosyl-DNA phosphod 65.8 4.3 0.00015 32.8 3.3 46 1-49 4-53 (256)
26 4f4h_A Glutamine dependent NAD 63.4 11 0.00039 35.2 6.1 71 33-118 178-250 (565)
27 1k77_A EC1530, hypothetical pr 63.1 46 0.0016 26.9 9.3 62 22-92 80-142 (260)
28 3cqj_A L-ribulose-5-phosphate 62.5 22 0.00075 29.6 7.3 62 23-92 104-165 (295)
29 2e11_A Hydrolase; dimethylarse 61.4 22 0.00074 29.4 7.0 61 40-117 165-228 (266)
30 3tva_A Xylose isomerase domain 61.3 18 0.00061 30.1 6.5 61 22-92 97-157 (290)
31 3kws_A Putative sugar isomeras 61.3 22 0.00075 29.5 7.1 79 8-92 77-164 (287)
32 1i60_A IOLI protein; beta barr 55.0 28 0.00096 28.4 6.6 75 9-92 60-141 (278)
33 3dx5_A Uncharacterized protein 54.9 60 0.0021 26.6 8.8 76 8-92 61-141 (286)
34 3l23_A Sugar phosphate isomera 54.3 65 0.0022 27.0 8.9 59 23-92 104-164 (303)
35 2hk0_A D-psicose 3-epimerase; 53.2 48 0.0016 27.7 7.9 65 23-92 103-169 (309)
36 3n05_A NH(3)-dependent NAD(+) 52.8 42 0.0014 31.5 8.0 70 34-118 174-245 (590)
37 3ayv_A Putative uncharacterize 51.7 31 0.0011 27.9 6.3 61 23-92 72-135 (254)
38 3qc0_A Sugar isomerase; TIM ba 51.3 29 0.00099 28.3 6.1 61 23-92 79-141 (275)
39 1uf5_A N-carbamyl-D-amino acid 50.9 64 0.0022 26.9 8.3 41 77-117 217-259 (303)
40 3bdk_A D-mannonate dehydratase 47.8 46 0.0016 29.5 7.0 41 9-49 78-126 (386)
41 2vhh_A CG3027-PA; hydrolase; 2 46.5 26 0.0009 31.2 5.3 65 36-116 246-328 (405)
42 3cny_A Inositol catabolism pro 46.2 70 0.0024 26.3 7.8 66 22-92 85-159 (301)
43 1ems_A Nitfhit, NIT-fragIle hi 46.2 21 0.00073 32.0 4.7 69 34-118 179-250 (440)
44 1vli_A Spore coat polysacchari 46.1 58 0.002 28.8 7.3 72 21-94 38-121 (385)
45 3rjt_A Lipolytic protein G-D-S 45.6 54 0.0019 25.1 6.7 61 22-91 112-172 (216)
46 2q02_A Putative cytoplasmic pr 44.2 87 0.003 25.3 8.0 72 9-92 65-138 (272)
47 1iuq_A Glycerol-3-phosphate ac 43.3 40 0.0014 29.6 5.7 64 21-89 204-267 (367)
48 2qw5_A Xylose isomerase-like T 43.0 76 0.0026 26.8 7.7 26 23-48 105-130 (335)
49 3u0h_A Xylose isomerase domain 40.6 71 0.0024 26.0 6.9 75 9-92 61-140 (281)
50 4h41_A Putative alpha-L-fucosi 39.3 89 0.003 27.1 7.3 69 25-94 52-120 (340)
51 4gz1_A Tyrosyl-DNA phosphodies 38.6 23 0.00077 28.2 3.4 40 7-49 8-49 (256)
52 2qul_A D-tagatose 3-epimerase; 38.0 45 0.0015 27.4 5.3 65 23-92 84-151 (290)
53 4hf7_A Putative acylhydrolase; 36.5 1.1E+02 0.0039 23.6 7.2 66 21-91 99-164 (209)
54 4eo3_A Bacterioferritin comigr 36.5 38 0.0013 29.1 4.6 23 102-124 101-123 (322)
55 1tz9_A Mannonate dehydratase; 35.7 2.1E+02 0.0072 24.5 10.0 38 9-46 69-114 (367)
56 2j6v_A UV endonuclease, UVDE; 34.7 1.2E+02 0.0043 25.5 7.5 66 23-93 57-122 (301)
57 3tif_A Uncharacterized ABC tra 34.3 1.2E+02 0.0041 24.4 7.2 69 35-118 158-226 (235)
58 3vni_A Xylose isomerase domain 33.7 1.2E+02 0.004 24.9 7.2 63 23-92 84-150 (294)
59 2i0f_A 6,7-dimethyl-8-ribityll 33.6 1.6E+02 0.0053 22.4 9.6 36 8-45 12-47 (157)
60 2gs3_A PHGPX, GPX-4, phospholi 32.9 1.6E+02 0.0054 22.2 7.4 16 105-120 154-169 (185)
61 3ixr_A Bacterioferritin comigr 32.7 1.2E+02 0.0042 22.8 6.7 25 23-47 68-92 (179)
62 3hp4_A GDSL-esterase; psychrot 32.6 85 0.0029 23.4 5.7 69 10-91 68-141 (185)
63 3p6l_A Sugar phosphate isomera 32.4 79 0.0027 25.5 5.8 57 9-92 77-133 (262)
64 4f1h_A Tyrosyl-DNA phosphodies 32.3 89 0.0031 24.1 6.0 40 7-49 2-43 (250)
65 2vup_A Glutathione peroxidase- 32.1 1.6E+02 0.0056 22.2 7.4 15 105-119 153-167 (190)
66 2zds_A Putative DNA-binding pr 31.8 73 0.0025 26.8 5.7 65 23-92 107-178 (340)
67 2wqp_A Polysialic acid capsule 31.3 66 0.0023 28.1 5.2 73 21-95 29-112 (349)
68 2c92_A 6,7-dimethyl-8-ribityll 30.1 1.2E+02 0.0041 23.1 5.9 68 7-97 16-84 (160)
69 3g8r_A Probable spore coat pol 29.9 48 0.0016 29.0 4.0 73 21-95 15-99 (350)
70 3qxb_A Putative xylose isomera 29.5 78 0.0027 26.5 5.4 64 23-91 110-176 (316)
71 3me7_A Putative uncharacterize 29.4 43 0.0015 25.3 3.4 41 77-121 104-145 (170)
72 3ilv_A Glutamine-dependent NAD 28.2 58 0.002 30.9 4.7 70 34-118 176-247 (634)
73 2obi_A PHGPX, GPX-4, phospholi 28.0 1.8E+02 0.0061 21.8 6.9 16 105-120 152-167 (183)
74 3teb_A Endonuclease/exonucleas 27.8 1.1E+02 0.0036 24.4 5.8 41 7-50 2-44 (266)
75 3lmz_A Putative sugar isomeras 27.4 94 0.0032 25.0 5.4 45 25-92 87-131 (257)
76 4gqc_A Thiol peroxidase, perox 27.3 51 0.0018 24.8 3.5 14 105-118 123-136 (164)
77 3ewb_X 2-isopropylmalate synth 26.8 1.1E+02 0.0039 25.7 5.9 53 20-90 114-166 (293)
78 3p94_A GDSL-like lipase; serin 26.2 2.1E+02 0.0071 21.5 8.1 75 9-91 75-159 (204)
79 1wdu_A TRAS1 ORF2P; four-layer 25.7 62 0.0021 25.8 4.0 39 9-51 18-56 (245)
80 1xla_A D-xylose isomerase; iso 25.5 2E+02 0.0067 25.1 7.5 64 23-92 112-179 (394)
81 1ivn_A Thioesterase I; hydrola 25.5 1E+02 0.0035 23.2 5.1 69 10-91 64-137 (190)
82 3tc3_A UV damage endonuclease; 24.7 2.9E+02 0.0098 23.5 7.9 66 22-92 55-120 (310)
83 1vyb_A ORF2 contains A reverse 23.9 89 0.0031 24.3 4.6 41 7-51 6-46 (238)
84 2i3y_A Epididymal secretory gl 23.9 1.4E+02 0.0047 23.7 5.6 23 25-47 73-95 (215)
85 3tue_A Tryparedoxin peroxidase 23.7 94 0.0032 25.0 4.5 32 80-117 130-161 (219)
86 3nvt_A 3-deoxy-D-arabino-heptu 23.7 2E+02 0.007 25.3 7.1 59 25-95 154-214 (385)
87 1k7c_A Rhamnogalacturonan acet 22.8 2.8E+02 0.0095 21.8 7.7 19 73-91 149-167 (233)
88 3gkn_A Bacterioferritin comigr 22.5 70 0.0024 23.5 3.4 17 103-119 125-141 (163)
89 2p31_A CL683, glutathione pero 22.5 2.4E+02 0.0084 21.0 6.9 15 105-119 149-163 (181)
90 2pcj_A ABC transporter, lipopr 21.7 2E+02 0.0069 22.8 6.3 41 74-116 178-218 (224)
91 3hmu_A Aminotransferase, class 21.6 1.9E+02 0.0065 25.8 6.7 21 73-93 243-263 (472)
92 2yxo_A Histidinol phosphatase; 21.1 2.5E+02 0.0086 22.5 6.9 60 28-95 17-80 (267)
93 3kij_A Probable glutathione pe 21.0 2.6E+02 0.0088 20.8 6.6 15 106-120 139-153 (180)
94 3k28_A Glutamate-1-semialdehyd 20.1 1.8E+02 0.0062 25.3 6.2 20 73-92 220-239 (429)
95 4gew_A 5'-tyrosyl-DNA phosphod 20.1 73 0.0025 27.6 3.4 38 9-49 118-159 (362)
No 1
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-54 Score=380.95 Aligned_cols=261 Identities=20% Similarity=0.356 Sum_probs=233.7
Q ss_pred CCCcceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHH
Q 022243 4 GKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (300)
Q Consensus 4 ~~~~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (300)
.+..+||||++|+++ .+|++.|++++.+++++|++.++|||||||++++||.+.+ +...++.. ..++++.|+++
T Consensus 16 ~~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~----~~~~a~~~-~~~~~~~l~~l 90 (281)
T 3p8k_A 16 PRGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEH----LNEKADNN-LGQSFSFIKHL 90 (281)
T ss_dssp CTTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGG----HHHHSEET-THHHHHHHHHH
T ss_pred ccCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhH----HHHhhhcc-CcHHHHHHHHH
Confidence 455789999999999 6999999999999999999999999999999999997653 33333332 24788999999
Q ss_pred HHHcCcEEeeeee-eccCCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCc-eeeec-CCccEEEEeec
Q 022243 83 AKELGVVMPVSFF-EEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF-KVFQT-KFAKIGVAICW 159 (300)
Q Consensus 83 a~~~~v~iv~g~~-~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~-~~~~~-~~~~ig~~IC~ 159 (300)
|++++++|++|+. ++.++++||++++|+++|++++.|+|.||++. |.|..+|++|+. . .+|++ +++|+|++|||
T Consensus 91 a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--f~E~~~f~~G~~-~~~v~~~~~~~~ig~~IC~ 167 (281)
T 3p8k_A 91 AEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM--LREHEFLTAGEY-VAEPFQLSDGTYVTQLICY 167 (281)
T ss_dssp HHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT--TTGGGTCCCCSS-CCCCEECTTCCEEEEEEGG
T ss_pred HhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC--cCccccCcCCCC-CceeEEeCCCcEEEEEEec
Confidence 9999999999975 56678999999999999999999999999863 579999999996 5 89999 99999999999
Q ss_pred cCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceeeccc
Q 022243 160 DQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITFYGN 238 (300)
Q Consensus 160 D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~~G~ 238 (300)
|++||++.+.++.+|||+|++|++|+. ....+|+.++++||+|| +|||+||++|... +..|.|.
T Consensus 168 D~~fpe~~r~~~~~Gadli~~psa~~~-------~~~~~~~~~~~arA~en~~~vv~~n~~G~~~--------~~~~~G~ 232 (281)
T 3p8k_A 168 DLRFPELLRYPARSGAKIAFYVAQWPM-------SRLQHWHSLLKARAIENNMFVIGTNSTGFDG--------NTEYAGH 232 (281)
T ss_dssp GGGCTHHHHHHHHTTCCEEEEEECCBG-------GGHHHHHHHHHHHHHHHTSEEEEEECEEECS--------SCEEECC
T ss_pred CCCCcHHHHHHHHCCCCEEEECCCCCC-------ccHHHHHHHHHHHHHHcCCEEEEEccCcCCC--------CcEEeee
Confidence 999999999999999999999999753 24688999999999999 9999999999643 4789999
Q ss_pred eEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHH
Q 022243 239 SFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 288 (300)
Q Consensus 239 S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~ 288 (300)
|+|++|+|+++++ ..++++++++++|++.++..|..+|+++|+|+++|+
T Consensus 233 S~ii~p~G~vl~~-~~~~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 233 SIVINPNGDLVGE-LNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp CEEECTTSCEEEE-CCSSCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred EEEECCCCCEEEe-cCCCCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 9999999999999 677899999999999999999999999999999983
No 2
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=8.5e-55 Score=382.46 Aligned_cols=264 Identities=23% Similarity=0.334 Sum_probs=223.5
Q ss_pred CCCcceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHH-hhcCCCCCChhHHHHHH
Q 022243 4 GKRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFF-QRAKPYKDHPTILKMQE 81 (300)
Q Consensus 4 ~~~~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 81 (300)
.+.++||||++|+++ .+|++.|++++.+++++|.+.++|||||||++++||.+.+ +. +.+++. ..++++.|++
T Consensus 16 ~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d----~~~~~a~~~-~~~~~~~l~~ 90 (283)
T 3hkx_A 16 IRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQ----ICAQVSAEQ-VDAARSRLRG 90 (283)
T ss_dssp CTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHH----HHHHCCHHH-HHHHHHHHHH
T ss_pred ecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHH----HHHHhcccc-CCHHHHHHHH
Confidence 456779999999999 6799999999999999999999999999999999997643 11 112111 2367899999
Q ss_pred HHHHcCcEEeeeeeeccC-CceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeecCCccEEEEeecc
Q 022243 82 LAKELGVVMPVSFFEEAN-NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWD 160 (300)
Q Consensus 82 ~a~~~~v~iv~g~~~~~~-~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D 160 (300)
+|++++++|++|++++.+ +++||++++|+++|++++.|+|.||++. .|..+|++|+..+.+|+++++|||++||||
T Consensus 91 ~a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~---~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D 167 (283)
T 3hkx_A 91 IARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP---EEKAAFVPGEQPPPVLSWGGRQLSLLVCYD 167 (283)
T ss_dssp HHHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH---HHHHHSCCCCSCCCEEEETTEEEEECCGGG
T ss_pred HHHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc---CchhhccCCCCCceEEEECCEEEEEEEecC
Confidence 999999999999988775 7899999999999999999999999652 488899999865679999999999999999
Q ss_pred CCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceeeccce
Q 022243 161 QWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITFYGNS 239 (300)
Q Consensus 161 ~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~~G~S 239 (300)
++||++++.++.+|||+|++|++|+. ....+|..++++||+|| +||++||++|... +..+.|.|
T Consensus 168 ~~fpe~~r~l~~~Ga~li~~ps~~~~-------~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~G~S 232 (283)
T 3hkx_A 168 VEFPEMVRAAAARGAQLVLVPTALAG-------DETSVPGILLPARAVENGITLAYANHCGPEG--------GLVFDGGS 232 (283)
T ss_dssp GGSHHHHHHHHHTTCSEEEEECCCBS-------CCTHHHHTHHHHHHHHHTCEEEEECBEEEET--------TEEEECCC
T ss_pred cCCHHHHHHHHHCCCCEEEECCCCCC-------cccHHHHHHHHHHHHHhCCEEEEEccccCCC--------CeEEeeEE
Confidence 99999999999999999999999853 12268899999999999 9999999999543 47899999
Q ss_pred EEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHHHHH
Q 022243 240 FIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLL 291 (300)
Q Consensus 240 ~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~~~~ 291 (300)
+|++|+|+++++++ ++++++++++|++.++..|..+++++|+|+++|+.++
T Consensus 233 ~ii~p~G~vl~~~~-~~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l~ 283 (283)
T 3hkx_A 233 VVVGPAGQPLGELG-VEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNWL 283 (283)
T ss_dssp EEECTTSCEEEECC-SSCEEEEEEEEC----------CHHHHSCHHHHHHHC
T ss_pred EEECCCCCEEEecC-CCCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhcC
Confidence 99999999999998 7899999999999999999999999999999998763
No 3
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=7.1e-54 Score=372.85 Aligned_cols=256 Identities=36% Similarity=0.615 Sum_probs=231.6
Q ss_pred eEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcC
Q 022243 9 VVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (300)
Q Consensus 9 ~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (300)
||||++|+++ .+|++.|++++.+++++|++.++|||||||++++||.+.+. .++.+.+++...+++++.|+++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~-~~~~~~a~~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETR-EEVFEIAQKIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCH-HHHHHHCBCTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCH-HHHHHhcCccCCCHHHHHHHHHHHHcC
Confidence 8999999999 69999999999999999999999999999999999976542 234455554445688999999999999
Q ss_pred cEEeeeeeeccCCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeecCCccEEEEeeccCCCHHHH
Q 022243 88 VVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 167 (300)
Q Consensus 88 v~iv~g~~~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~~~~~~~ 167 (300)
++|++|.+++.++++||++++++++| +++.|+|.||+ +.|..+|++|+..+.+|+++++|+|++||||++||++.
T Consensus 81 ~~iv~G~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~----~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~~fpe~~ 155 (262)
T 3ivz_A 81 VYIVAGTAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF----YREKFFFEPGDLGFRVFDLGFMKVGVMICFDWFFPESA 155 (262)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTE-EEEEEECSSCC----GGGGGTCBCCCSCSCEEECSSCEEEECCGGGGGSHHHH
T ss_pred cEEEEeEEEeeCCcEEEEEEEEcCCe-eEEEEeecccC----CchhceEeCCCCCceEEEECCEEEEEEEecCCCchHHH
Confidence 99999999888899999999999999 99999999995 36999999998447899999999999999999999999
Q ss_pred HHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceeeccceEEECCCC
Q 022243 168 RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITFYGNSFIAGPTG 246 (300)
Q Consensus 168 ~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~~G~S~i~~p~G 246 (300)
+.++.+|||+|++|++|+. . +|..++++||+|| +||++||++|.+. +..+.|.|+|++|+|
T Consensus 156 r~~~~~ga~li~~ps~~~~--------~--~~~~~~~~rA~en~~~vv~~n~~G~~~--------~~~~~G~S~ii~p~G 217 (262)
T 3ivz_A 156 RTLALKGADVIAHPANLVM--------P--YAPRAMPIRALENKVYTVTADRVGEER--------GLKFIGKSLIASPKA 217 (262)
T ss_dssp HHHHHTTCSEEEEEECCCS--------S--CHHHHHHHHHHHHTCEEEEEECCSEET--------TEECCCCCEEECTTS
T ss_pred HHHHHCCCCEEEEcCCCCc--------h--HHHHHHHHHHHhcCcEEEEECCCCcCC--------CceEeeeEEEECCCC
Confidence 9999999999999999753 1 5888999999999 9999999999653 478999999999999
Q ss_pred CcccccCCCCCcEEEEEechhhHHhhhcc--CCCccccChhhHH
Q 022243 247 EIVAAADDKEEAVLVAQFDLDKLKSKRSS--WGVFRDRRPELYK 288 (300)
Q Consensus 247 ~~i~~~~~~~~~~~~~~id~~~~~~~r~~--~~~~~~~~~~~~~ 288 (300)
+++++++.++++++++++|++.++..|.. +|+++|+|+++|.
T Consensus 218 ~il~~~~~~~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~ 261 (262)
T 3ivz_A 218 EVLSMASETEEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYF 261 (262)
T ss_dssp CEEEECCSSCCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSC
T ss_pred CEeecCCCCCceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhC
Confidence 99999998888899999999999999987 8999999999994
No 4
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=2.3e-52 Score=368.70 Aligned_cols=269 Identities=25% Similarity=0.416 Sum_probs=226.3
Q ss_pred CCCCcceEEEEEeCCC-CCCHHHHHHHHHHHHHHH--HhCCCeEEEeccccCCCccCCccchHHHhhcCCC-CC--ChhH
Q 022243 3 KGKRREVVVSALQFAC-TDDVSTNLATAERLVRAA--HGKGANIILIQELFEGYYFCQAQREDFFQRAKPY-KD--HPTI 76 (300)
Q Consensus 3 ~~~~~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A--~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~-~~--~~~~ 76 (300)
+.|+++||||++|+++ .+|++.|++++.+++++| .+.++|||||||++++||.+.+ +...++.. .. ++++
T Consensus 5 ~~m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~----~~~~~~~~~~~~~~~~~ 80 (291)
T 1f89_A 5 KILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQ----FRKYSEVINPKEPSTSV 80 (291)
T ss_dssp SSBSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHH----HHHHTTBCCSSSCCHHH
T ss_pred ccccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHH----HHHHhhhhccCCCChHH
Confidence 4566779999999995 899999999999999999 8899999999999999985422 33333433 12 5788
Q ss_pred HHHHHHHHHcCcEEeeee-eeccC--CceeeEEEEEcCCCCeeeeeeeccCCC-----CCCCCcceeecCCCCCceeeec
Q 022243 77 LKMQELAKELGVVMPVSF-FEEAN--NAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKVFQT 148 (300)
Q Consensus 77 ~~l~~~a~~~~v~iv~g~-~~~~~--~~~yN~~~vi~~~G~i~~~~~K~~l~~-----~~~~~e~~~~~~G~~~~~~~~~ 148 (300)
+.|+++|++++++|++|. +++.+ +++||++++|+++|++++.|+|+||+. ...+.|..+|.+|+. +.+|++
T Consensus 81 ~~l~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~-~~v~~~ 159 (291)
T 1f89_A 81 QFLSNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEK-STTIDT 159 (291)
T ss_dssp HHHHHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCC-CEEEEE
T ss_pred HHHHHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCC-CceEec
Confidence 999999999999999995 56555 789999999999999999999999943 223468889999986 789999
Q ss_pred CCccEEEEeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCcccccc
Q 022243 149 KFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETE 227 (300)
Q Consensus 149 ~~~~ig~~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~ 227 (300)
+++|+|++||||++||++++.+..+|+|+|++|++|+.. ....+|..++++||+|| +||+.||++|...
T Consensus 160 ~~~~ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~---- 229 (291)
T 1f89_A 160 KYGKFGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTV------TGPLHWHLLARSRAVDNQVYVMLCSPARNLQ---- 229 (291)
T ss_dssp TTEEEEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTT------HHHHHHHHHHHHHHHHHTSEEEEECCCCCTT----
T ss_pred CCeeEEEEEecccCchHHHHHHHhhCCCEEEECCcCCCC------CcHHHHHHHHHHHHHHcCCEEEEecCccCCC----
Confidence 999999999999999999999999999999999987531 23578999999999999 9999999999532
Q ss_pred CCCcceeeccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHHHH
Q 022243 228 HGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVL 290 (300)
Q Consensus 228 ~g~~~~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~~~ 290 (300)
++..|.|.|+|++|+|+++++++. +++++++++|++.++..|..+++++|+|+++|+.+
T Consensus 230 ---~~~~~~G~S~ii~p~G~vl~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 288 (291)
T 1f89_A 230 ---SSYHAYGHSIVVDPRGKIVAEAGE-GEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDV 288 (291)
T ss_dssp ---SSSCBCCCCEEECTTSCEEEECCS-SSEEEEEEECHHHHHHHHHHSCCCCCCCC------
T ss_pred ---CCCeeeeEEEEECCCCCEEEecCC-CCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhh
Confidence 247899999999999999999876 79999999999999999999999999999999866
No 5
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=2.9e-52 Score=365.40 Aligned_cols=263 Identities=29% Similarity=0.458 Sum_probs=230.0
Q ss_pred ceEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcC
Q 022243 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELG 87 (300)
Q Consensus 8 ~~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~ 87 (300)
+||||++|+++.+|++.|++++.+++++|.+.++|||||||++++||.+.+ ....++... .++++.|+++|++++
T Consensus 3 ~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~----~~~~~~~~~-~~~~~~l~~~a~~~~ 77 (276)
T 2w1v_A 3 TFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTY----FPDYAEKIP-GESTQKLSEVAKESS 77 (276)
T ss_dssp EEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTT----HHHHCBCSS-SHHHHHHHHHHHHHT
T ss_pred ccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHH----HHHHhccCC-CHHHHHHHHHHHHcC
Confidence 599999999998999999999999999999999999999999999987643 223333332 578899999999999
Q ss_pred cEEeeee-eeccCCceeeEEEEEcCCCCeeeeeeeccCC-----CCCCCCcceeecCCCCCceeeecCCccEEEEeeccC
Q 022243 88 VVMPVSF-FEEANNAHYNSIAIIDADGSDLGLYRKSHIP-----DGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQ 161 (300)
Q Consensus 88 v~iv~g~-~~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~-----~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~ 161 (300)
++|++|. .++.++++||++++|+++|++++.|+|+||+ ....+.|..+|.+|+. +.+|+++++|+|++||||+
T Consensus 78 ~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~ 156 (276)
T 2w1v_A 78 IYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTPYCKVGLGICYDM 156 (276)
T ss_dssp SEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCC-CCEEECSSCEEEECCGGGG
T ss_pred eEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCC-ceeEEeCCceEEEEEEecc
Confidence 9999994 5555778999999999999999999999993 3223458889999986 7899999999999999999
Q ss_pred CCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceeeccceE
Q 022243 162 WFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITFYGNSF 240 (300)
Q Consensus 162 ~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~~G~S~ 240 (300)
+||++.+.+..+|||+|++|++|+.. ....+|..++++||+|| +||+.||++|.+. ++..+.|.|+
T Consensus 157 ~fpe~~r~~~~~ga~ll~~ps~~~~~------~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~-------~~~~~~G~S~ 223 (276)
T 2w1v_A 157 RFAELAQIYAQRGCQLLVYPGAFNLT------TGPAHWELLQRARAVDNQVYVATASPARDDK-------ASYVAWGHST 223 (276)
T ss_dssp GCHHHHHHHHHTTEEEEEEECCCCTT------HHHHHHHHHHHHHHHHHTCEEEEECCCCCTT-------SSSCCCCCCE
T ss_pred ccHHHHHHHHHcCCCEEEECCcCCCc------CCHHHHHHHHHHHHHHcCcEEEEecccccCC-------CCceeeeEeE
Confidence 99999999999999999999987531 13578999999999999 9999999999643 2367899999
Q ss_pred EECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHHHH
Q 022243 241 IAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVL 290 (300)
Q Consensus 241 i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~~~ 290 (300)
|++|+|+++++++. +++++++++|++.++..|..+++++|+|+++|++.
T Consensus 224 ii~p~G~v~~~~~~-~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~ 272 (276)
T 2w1v_A 224 VVDPWGQVLTKAGT-EETILYSDIDLKKLAEIRQQIPILKQKRADLYTVE 272 (276)
T ss_dssp EECTTSCEEEECCS-SSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEEEE
T ss_pred EECCCCCEeEEcCC-CCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhhcc
Confidence 99999999999887 89999999999999999999999999999999643
No 6
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=1.9e-51 Score=377.09 Aligned_cols=282 Identities=29% Similarity=0.461 Sum_probs=226.4
Q ss_pred CCcceEEEEEeCCCC--------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCc-cchHHHhhcCCCCCChh
Q 022243 5 KRREVVVSALQFACT--------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPT 75 (300)
Q Consensus 5 ~~~~~~Ia~~Q~~~~--------~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 75 (300)
++.+||||++|+++. ++.+.|++++.+++++|.+.|+|||||||++++||.... ....+...++....+++
T Consensus 69 ~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~ 148 (405)
T 2vhh_A 69 KRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPT 148 (405)
T ss_dssp CCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHH
T ss_pred CCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHH
Confidence 345799999999962 468999999999999999999999999999999985321 11112233333334578
Q ss_pred HHHHHHHHHHcCcEEeeeeeecc---CCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeecCCcc
Q 022243 76 ILKMQELAKELGVVMPVSFFEEA---NNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAK 152 (300)
Q Consensus 76 ~~~l~~~a~~~~v~iv~g~~~~~---~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ 152 (300)
++.|+++|++++++|++|+.++. ++++||++++|+++|++++.|+|+||++++.|.|..+|.+|+..+.+|+++++|
T Consensus 149 ~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g~f~E~~~f~~G~~~~~vf~~~~~r 228 (405)
T 2vhh_A 149 TKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETEFGK 228 (405)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC----------CCCCSCCCEEEETTEE
T ss_pred HHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCCCcCcccceeCCCCCCeeEEECCEE
Confidence 89999999999999999998765 468999999999999999999999999888888999999998546899999999
Q ss_pred EEEEeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccc----c
Q 022243 153 IGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIET----E 227 (300)
Q Consensus 153 ig~~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~----~ 227 (300)
||++||||++||+.++.++.+|||+|++|++|... ....+|..++++||+|| +||+.||++|.+.... .
T Consensus 229 iG~~ICyD~~fPe~~r~la~~GAdill~psa~~~~------~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~ 302 (405)
T 2vhh_A 229 LAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGR------LSEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSG 302 (405)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBCT------TTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC------
T ss_pred EEEEEeccccChHHHHHHHHcCCCEEEEcccCCCC------CCHHHHHHHHHHHHHHcCceEEEeccccccccccccccc
Confidence 99999999999999999999999999999997431 24578999999999999 9999999998652100 0
Q ss_pred CCC----cceeeccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHHHHHh
Q 022243 228 HGK----SQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLT 292 (300)
Q Consensus 228 ~g~----~~~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~~~~~ 292 (300)
.|. +...|.|.|+|++|+|+++++++.++++++++++|++.++..|..+++++|+|+++|..++.
T Consensus 303 ~g~~~~~~~~~f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~~ 371 (405)
T 2vhh_A 303 DGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFK 371 (405)
T ss_dssp -----------EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHHH
T ss_pred cCccccccCceeccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHHH
Confidence 010 12468999999999999999998778999999999999999999999999999999998877
No 7
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=2.9e-51 Score=363.74 Aligned_cols=278 Identities=28% Similarity=0.402 Sum_probs=230.8
Q ss_pred cceEEEEEeCCC-C--CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc--c-hHHHhhcCCCCCChhHHHHH
Q 022243 7 REVVVSALQFAC-T--DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--R-EDFFQRAKPYKDHPTILKMQ 80 (300)
Q Consensus 7 ~~~~Ia~~Q~~~-~--~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~--~-~~~~~~~~~~~~~~~~~~l~ 80 (300)
++||||++|+++ . +|++.|++++.+++++|.+.++|||||||++++||.+.+. . .+.....+.....++++.|+
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLF 81 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHH
Confidence 579999999998 4 7999999999999999999999999999999999965431 1 00111111111347789999
Q ss_pred HHHHHcCcEEeeeeeecc-CC---ceeeEEEEEcCCCCeeeeeeeccCCCCC------CC--CcceeecCCCCCceeeec
Q 022243 81 ELAKELGVVMPVSFFEEA-NN---AHYNSIAIIDADGSDLGLYRKSHIPDGP------GY--QEKFYFNPGDTGFKVFQT 148 (300)
Q Consensus 81 ~~a~~~~v~iv~g~~~~~-~~---~~yN~~~vi~~~G~i~~~~~K~~l~~~~------~~--~e~~~~~~G~~~~~~~~~ 148 (300)
++|++++++|++|++++. ++ ++||++++++++|++++.|+|+||+.+. .| .|..+|+||+..+.+|++
T Consensus 82 ~~a~~~~~~iv~G~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~~~ 161 (303)
T 1uf5_A 82 EKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDV 161 (303)
T ss_dssp HHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEEE
T ss_pred HHHHHhCeEEEEeeeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccccccccchhhccCCCCCCceEec
Confidence 999999999999988764 44 7999999999999999999999997332 23 588899999833789999
Q ss_pred CCccEEEEeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCC---CCcHHHHHHHhhhhhhcc-ceEEEecCCCCccc
Q 022243 149 KFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDG---LDSRDHWRRVMQGHAGAN-VPLVASNRIGKEII 224 (300)
Q Consensus 149 ~~~~ig~~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~---~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~ 224 (300)
+++|+|++||||++||++.+.++.+|||+|++|++|+..+.... .....+|+.++++||+|| +||+.||++|.+.
T Consensus 162 ~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~- 240 (303)
T 1uf5_A 162 DAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEE- 240 (303)
T ss_dssp TTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEET-
T ss_pred CCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECcccccC-
Confidence 99999999999999999999999999999987777543221100 004578999999999999 9999999999643
Q ss_pred cccCCCcceeeccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhcc-CCCccccChhhHHHHHh
Q 022243 225 ETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSS-WGVFRDRRPELYKVLLT 292 (300)
Q Consensus 225 ~~~~g~~~~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~-~~~~~~~~~~~~~~~~~ 292 (300)
+..+.|.|+|++|+|+++++++.++++++++++|++.++..|.. +++++|+|+++|..+.+
T Consensus 241 -------~~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~~ 302 (303)
T 1uf5_A 241 -------NCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAE 302 (303)
T ss_dssp -------TEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGGC
T ss_pred -------CccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhhc
Confidence 36799999999999999999987788999999999999999999 99999999999987653
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.9e-52 Score=360.14 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=225.0
Q ss_pred ceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHc
Q 022243 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (300)
Q Consensus 8 ~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (300)
+||||++|+++ .+|++.|++++.+++++| +.++|||||||++++||.... ...++.. .+++++.|+++|+++
T Consensus 3 ~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~-----~~~a~~~-~~~~~~~l~~~a~~~ 75 (266)
T 2e11_A 3 DLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEA-----IDKAEDM-DGPTVAWIRTQAARL 75 (266)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGG-----GGGCEET-TSHHHHHHHHHHHHH
T ss_pred ccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhH-----HHhhccC-CCHHHHHHHHHHHHh
Confidence 49999999999 699999999999999999 889999999999999985321 1222222 357889999999999
Q ss_pred CcEEeeeeeeccCCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeecCCccEEEEeeccCCCHHH
Q 022243 87 GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEA 166 (300)
Q Consensus 87 ~v~iv~g~~~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~~~~~ig~~IC~D~~~~~~ 166 (300)
+++|++|++++.++++||++++++++|+++ .|+|.||+++ +.|..+|.+|+. +.+|+++++|+|++||||++||++
T Consensus 76 ~~~iv~G~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~--~~E~~~f~~G~~-~~v~~~~~~~ig~~ICyD~~fpe~ 151 (266)
T 2e11_A 76 GAAITGSVQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF--GNEHLRYAAGRE-RLCVEWKGWRINPQVCYDLRFPVF 151 (266)
T ss_dssp TSEEEEEEEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG--GTTTTTSBCCCS-CCCEEETTEEEEEEEGGGGGCTTT
T ss_pred CCEEEEeeeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC--cChhhhccCCCC-ceEEEECCEEEEEEEEeccCCHHH
Confidence 999999998887889999999999999999 9999999875 358889999986 789999999999999999999999
Q ss_pred HHHHH---Hc---CCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceeeccce
Q 022243 167 ARAMV---LQ---GAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITFYGNS 239 (300)
Q Consensus 167 ~~~~~---~~---gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~~G~S 239 (300)
.+.+. .+ |||+|++|++|+. ....+|+.++++||+|| +|||+||++|.+. ++..+.|.|
T Consensus 152 ~r~~~~~~~~~~~ga~~i~~~s~w~~-------~~~~~~~~~~~~rA~en~~~vv~an~~G~~~-------~~~~~~G~S 217 (266)
T 2e11_A 152 CRNRFDVERPGQLDFDLQLFVANWPS-------ARAYAWKTLLRARAIENLCFVAAVNRVGVDG-------NQLHYAGDS 217 (266)
T ss_dssp TCCCBSSSSTTSBSCSEEEEEECCCG-------GGHHHHHHHHHHHHHHTTSEEEEEECEEECT-------TSCEEEEEE
T ss_pred HHHHHhhhhccCCCCcEEEEeCCCCC-------CchHHHHHHHHHHHHhcCcEEEEEcCCcCCC-------CCceEeeeE
Confidence 88864 43 9999999999753 24568999999999999 9999999999653 136899999
Q ss_pred EEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHH
Q 022243 240 FIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYK 288 (300)
Q Consensus 240 ~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~ 288 (300)
+|++|+|+++++++ ++++++++++|++.++..|..+++++|+|+++|+
T Consensus 218 ~ii~p~G~v~~~~~-~~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 218 AVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp EEECTTSCEEEEEE-SSCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred EEECCCCceeeecC-CCCeEEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 99999999999998 7899999999999999999999999999999884
No 9
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=9.4e-49 Score=364.37 Aligned_cols=267 Identities=24% Similarity=0.396 Sum_probs=227.7
Q ss_pred cceEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHc
Q 022243 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (300)
Q Consensus 7 ~~~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (300)
++||||++|+++.+|.+.|++++.+++++|++.|+|||||||+++++|...+. ....++.. .+++++.|+++|+++
T Consensus 13 ~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~---~~~~a~~~-~~~~~~~l~~~A~~~ 88 (440)
T 1ems_A 13 GRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNE---QIDLAMAT-DCEYMEKYRELARKH 88 (440)
T ss_dssp SEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHH---HHHHHHHH-HHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhH---HHHhhccC-CCHHHHHHHHHHHHc
Confidence 47999999999988999999999999999999999999999999988754221 11111111 136788999999999
Q ss_pred CcEEeeeeee---c-cCCceeeEEEEEcCCCCeeeeeeeccCCC-----CCCCCcceeecCCCCCcee-eecCCccEEEE
Q 022243 87 GVVMPVSFFE---E-ANNAHYNSIAIIDADGSDLGLYRKSHIPD-----GPGYQEKFYFNPGDTGFKV-FQTKFAKIGVA 156 (300)
Q Consensus 87 ~v~iv~g~~~---~-~~~~~yN~~~vi~~~G~i~~~~~K~~l~~-----~~~~~e~~~~~~G~~~~~~-~~~~~~~ig~~ 156 (300)
+++|++|++. + .++++||++++|+++|++++.|+|.||++ ...|.|..+|+||+. ..+ |+++++|+|++
T Consensus 89 ~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~-~~~~~~~~~~~iG~~ 167 (440)
T 1ems_A 89 NIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTE-MIPPVDTPIGRLGLS 167 (440)
T ss_dssp TCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCS-CCCCEEETTEEECCC
T ss_pred CeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCC-CceeEECCCeeEEEE
Confidence 9999999654 3 34689999999999999999999999953 223468889999986 566 99999999999
Q ss_pred eeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcceee
Q 022243 157 ICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQITF 235 (300)
Q Consensus 157 IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~~ 235 (300)
||||++||++.+.++.+|||+|++|++|+.. ....+|..++++||+|| +||+.||++|.+. ++..+
T Consensus 168 ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~------~~~~~~~~~~~arA~En~~~vv~an~~G~~~-------~~~~~ 234 (440)
T 1ems_A 168 ICYDVRFPELSLWNRKRGAQLLSFPSAFTLN------TGLAHWETLLRARAIENQCYVVAAAQTGAHN-------PKRQS 234 (440)
T ss_dssp CGGGGGCHHHHHHHHHTTCSEEECCBCCCHH------HHHHHHHHHHHHHHHHHTCEEEECBBEEEEE-------TTEEE
T ss_pred EeccccChHHHHHHHHcCCcEEEECCcCCCC------CcHHHHHHHHHHHHHhcCcEEEEecccccCC-------CCcee
Confidence 9999999999999999999999999997531 13468999999999999 9999999999643 13789
Q ss_pred ccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccccChhhHHHHHh
Q 022243 236 YGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRDRRPELYKVLLT 292 (300)
Q Consensus 236 ~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~~~~~~~~~~~~ 292 (300)
.|.|+|++|+|+++++++ .+++++++++|++.++..|..+++++|+|+++|.++.+
T Consensus 235 ~G~S~ii~P~G~vla~~~-~~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~~ 290 (440)
T 1ems_A 235 YGHSMVVDPWGAVVAQCS-ERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHIN 290 (440)
T ss_dssp ECCCEEECTTSCEEEECC-SSSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCCC
T ss_pred eeeeEEECCCCCeeccCC-CCCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhcccc
Confidence 999999999999999987 47899999999999999999999999999999987665
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=1.6e-46 Score=336.98 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=214.0
Q ss_pred cceEEEEEeCCC-----CCCHHHHHHHHHHHHHHHHh--CCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHH
Q 022243 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (300)
Q Consensus 7 ~~~~Ia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~--~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (300)
++||||++|+++ .+|++.|++++.+++++|++ .++|||||||++++||..... +..+.++.. ..++++.|
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~--~~~~~a~~~-~~~~~~~l 88 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKW--LSEEFLLDV-PGKETELY 88 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTT--TSGGGCBCS-SSHHHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChh--HHHHhhccC-CCHHHHHH
Confidence 469999999985 36889999999999999987 799999999999999754321 112223322 35788999
Q ss_pred HHHHHHcCcEEeeeeeeccC-Cc--eeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeec-CCccEEE
Q 022243 80 QELAKELGVVMPVSFFEEAN-NA--HYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKIGV 155 (300)
Q Consensus 80 ~~~a~~~~v~iv~g~~~~~~-~~--~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~ig~ 155 (300)
+++|++++++|++|++++.+ ++ +||++++|+++|++++.|+|+||+. |..+|.||+....+|++ .+.|+|+
T Consensus 89 ~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~-----e~~~f~~G~~~~~v~~~~~g~~iG~ 163 (334)
T 2dyu_A 89 AKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN-----PIEPWYPGDLGMPVCEGPGGSKLAV 163 (334)
T ss_dssp HHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCCCCCSCCCCEECGGGCEEEE
T ss_pred HHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC-----CcccCcCCCCCceeEECCCCCEEEE
Confidence 99999999999999987753 44 9999999999999999999999753 45678999864458998 4669999
Q ss_pred EeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCccee
Q 022243 156 AICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQIT 234 (300)
Q Consensus 156 ~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~~~ 234 (300)
+||||++||++++.++.+|||+|++|++|+. ....+|..++++||+|| +||+.||++|.+. +..
T Consensus 164 ~ICyD~~fpe~~r~~~~~Gadlil~psaw~~-------~~~~~~~~~~~arA~En~~~vv~an~~G~~~--------~~~ 228 (334)
T 2dyu_A 164 CICHDGMIPELAREAAYKGCNVYIRISGYST-------QVNDQWILTNRSNAWHNLMYTVSVNLAGYDN--------VFY 228 (334)
T ss_dssp EEGGGGGCHHHHHHHHHTTCSEEEEEESSCT-------TSHHHHHHHHHHHHHHHTCEEEEEECSBSSS--------SCC
T ss_pred EEECCCCchHHHHHHHHcCCCEEEEeCCCCC-------CcHHHHHHHHHHHHHhCCCEEEEECCCcCCC--------Cee
Confidence 9999999999999999999999999999853 23578999999999999 9999999999653 468
Q ss_pred eccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCccc
Q 022243 235 FYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVFRD 281 (300)
Q Consensus 235 ~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~~~ 281 (300)
+.|.|+|++|+|+++++++.++++++++++|++.++..|..+++..+
T Consensus 229 ~~G~S~Iidp~G~vla~~~~~~e~il~a~idl~~~~~~R~~~~~~~~ 275 (334)
T 2dyu_A 229 YFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENN 275 (334)
T ss_dssp CCCEEEEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTTCH
T ss_pred eeeEEEEECCCCCEeeecCCCCCeEEEEEEcHHHHHHHHhhCchhhh
Confidence 99999999999999999987789999999999999999998887654
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=2.6e-46 Score=336.34 Aligned_cols=249 Identities=20% Similarity=0.234 Sum_probs=214.4
Q ss_pred cceEEEEEeCCC-----CCCHHHHHHHHHHHHHHHHh--CCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHH
Q 022243 7 REVVVSALQFAC-----TDDVSTNLATAERLVRAAHG--KGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKM 79 (300)
Q Consensus 7 ~~~~Ia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~--~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (300)
++||||++|+++ .+|++.|++++.+++++|++ .++|||||||++++||.... .++.+.++... .++++.|
T Consensus 11 ~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~--~~~~~~a~~~~-~~~~~~l 87 (341)
T 2uxy_A 11 DTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDP--AEMMETAVAIP-GEETEIF 87 (341)
T ss_dssp TEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSH--HHHHHHCBCSS-SHHHHHH
T ss_pred CccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCH--HHHHHHhccCC-CHHHHHH
Confidence 579999999994 36899999999999999987 79999999999999975432 22334444332 4788999
Q ss_pred HHHHHHcCcEEeeeee-eccC----CceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCceeeec-CCccE
Q 022243 80 QELAKELGVVMPVSFF-EEAN----NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQT-KFAKI 153 (300)
Q Consensus 80 ~~~a~~~~v~iv~g~~-~~~~----~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~~~~-~~~~i 153 (300)
+++|+++++++++|++ ++.+ +.+||++++|+++|++++.|+|+||+. |..+|.||+. ..+|++ .+.||
T Consensus 88 ~~~a~~~~i~iv~G~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~-----e~~~f~pG~~-~~v~~~~~G~ri 161 (341)
T 2uxy_A 88 SRACRKANVWGVFSLTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC-----PIEGWYPGGQ-TYVSEGPKGMKI 161 (341)
T ss_dssp HHHHHHHTCEEEEEEEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT-----TTCCCBCCCC-CCCEECGGGCEE
T ss_pred HHHHHHhCcEEEEEeeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC-----CccceeCCCC-ceEEECCCCCEE
Confidence 9999999999999988 6643 349999999999999999999999853 5567899986 579999 46699
Q ss_pred EEEeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccCCCcc
Q 022243 154 GVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEHGKSQ 232 (300)
Q Consensus 154 g~~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~g~~~ 232 (300)
|++||||++||++++.++.+|||+|++|++|+. ....+|..++++||+|| +||++||++|.+. .
T Consensus 162 G~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~-------~~~~~~~~l~~arA~En~~~vv~an~~G~~~--------~ 226 (341)
T 2uxy_A 162 SLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMY-------PAKDQQVMMAKAMAWANNCYVAVANAAGFDG--------V 226 (341)
T ss_dssp EEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBT-------TCHHHHHHHHHHHHHHHTCEEEEEECEEECS--------S
T ss_pred EEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCC-------CcHHHHHHHHHHHHHhCCcEEEEECCCCCCC--------C
Confidence 999999999999999999999999999999853 24578999999999999 9999999999542 4
Q ss_pred eeeccceEEECCCCCcccccCCCCCcEEEEEechhhHHhhhccCCCc
Q 022243 233 ITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLKSKRSSWGVF 279 (300)
Q Consensus 233 ~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~~~r~~~~~~ 279 (300)
..|.|.|+|++|+|+++++++.++++++++++|++.++..|..++..
T Consensus 227 ~~~~G~S~Iidp~G~vla~~~~~~e~il~a~id~~~~~~~R~~~~~~ 273 (341)
T 2uxy_A 227 YSYFGHSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQSQ 273 (341)
T ss_dssp CEEECCCEEECTTSCEEEECCSCTTCEEEEEEEHHHHHHHHHHCCTT
T ss_pred ceeeeEEEEECCCCCEEEECCCCCCEEEEEEEcHHHHHHHHhhcchh
Confidence 78999999999999999999888899999999999999999887753
No 12
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=3.8e-46 Score=354.19 Aligned_cols=241 Identities=27% Similarity=0.410 Sum_probs=207.2
Q ss_pred CCcceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc--chHHHhhcCCCCCChhHHHHHH
Q 022243 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--REDFFQRAKPYKDHPTILKMQE 81 (300)
Q Consensus 5 ~~~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~l~~ 81 (300)
..++||||++|+++ .+|++.|++++.+++++|+++|||||||||++++||.+.+. .+.+.+.+ ...+.+
T Consensus 3 ~sMkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~~~--------~~~l~~ 74 (565)
T 4f4h_A 3 GSMKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYAAS--------DAALAE 74 (565)
T ss_dssp ---CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHHHH--------HHHHHH
T ss_pred CCcceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHHHH--------HHHHHH
Confidence 34679999999998 69999999999999999999999999999999999998873 33333322 233444
Q ss_pred HHH----HcCcEEeeeeeeccC----------------CceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCC
Q 022243 82 LAK----ELGVVMPVSFFEEAN----------------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDT 141 (300)
Q Consensus 82 ~a~----~~~v~iv~g~~~~~~----------------~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~ 141 (300)
+++ ..+++|++|.+.+.. +++||+++++. +|++++.|+|+|||+++.|.|.++|.+|..
T Consensus 75 la~~~~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hLp~~~~f~E~r~f~~G~~ 153 (565)
T 4f4h_A 75 LAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDLPNTEVFDEKRYFATDAA 153 (565)
T ss_dssp HHHHHTTSTTCEEEEEEEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSCCCSTTCCGGGTCCCCCC
T ss_pred HHHHhhhcCCcEEEEeeeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeecCCCcccceeccccCCCc
Confidence 443 357899999876432 35899999995 799999999999999999999999999997
Q ss_pred CceeeecCCccEEEEeeccCCCHHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCC
Q 022243 142 GFKVFQTKFAKIGVAICWDQWFPEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIG 220 (300)
Q Consensus 142 ~~~~~~~~~~~ig~~IC~D~~~~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G 220 (300)
+.+|+++++|||+.||||+|||++.+.++..||++|++|++|+. ...+..+|..++++||.++ |++|++|++|
T Consensus 154 -~~v~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~-----~~gk~~~r~~ll~arA~e~~~~vvy~N~vG 227 (565)
T 4f4h_A 154 -PYVFELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPY-----HMNKDAVRIDILRARIRETGLPMVYVNLVG 227 (565)
T ss_dssp -CCEEEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBC-----CTTHHHHHHHHHHHHHHHHCCCEEEEECEE
T ss_pred -ceeEEecCcEEEEEEeehhcccchhHHHHhCCCeeeeccccccc-----ccCcHHHHHHHHHHHHHHhCCcEEEeeeec
Confidence 78999999999999999999999999999999999999999753 2235689999999999999 9999999999
Q ss_pred CccccccCCCcceeeccceEEECCCCCcccccCCCCCcEEEEEechhh
Q 022243 221 KEIIETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDK 268 (300)
Q Consensus 221 ~~~~~~~~g~~~~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~ 268 (300)
|.++..|+|+|+|++|+|+++++++.++++++++++|...
T Consensus 228 --------~~~~~~f~G~S~iidp~G~vla~~~~f~e~~~~~d~d~~~ 267 (565)
T 4f4h_A 228 --------GQDELVFDGGSFVLDGAGELVAKMPQFEEGNAIVEFDGAR 267 (565)
T ss_dssp --------EETTEEEEBCCEEECTTSCEEEECCBSCCEEEEEEEETTE
T ss_pred --------CCCCeEEECCcceecCCCcEEEEccccccceEEEEecccc
Confidence 4456899999999999999999999999999999998653
No 13
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=5.5e-46 Score=356.28 Aligned_cols=243 Identities=24% Similarity=0.343 Sum_probs=214.6
Q ss_pred CCcceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccc--hHHHhhcCCCCCChhHHHHHH
Q 022243 5 KRREVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQR--EDFFQRAKPYKDHPTILKMQE 81 (300)
Q Consensus 5 ~~~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 81 (300)
|.++||||++|+++ .+|++.|++++.+++++|++.|||||||||++++||.+.+.. .++. .+..+.|.+
T Consensus 1 M~~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~--------~~~~~~l~~ 72 (590)
T 3n05_A 1 MSLQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV--------EASRTALRE 72 (590)
T ss_dssp -CEEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH--------HHHHHHHHH
T ss_pred CCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH--------HHHHHHHHH
Confidence 45689999999998 699999999999999999999999999999999999887632 1111 245678899
Q ss_pred HHHHc--C----cEEeeeeeeccC----------CceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCcee
Q 022243 82 LAKEL--G----VVMPVSFFEEAN----------NAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKV 145 (300)
Q Consensus 82 ~a~~~--~----v~iv~g~~~~~~----------~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~~~ 145 (300)
+|+++ + ++|++|++++.+ +++||++++|+ +|++++.|+|+||++++.|.|.++|+||+. +.+
T Consensus 73 la~~~~~~~~~~i~ivvG~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~~f~E~r~f~~G~~-~~v 150 (590)
T 3n05_A 73 LAARLAEEGFGELPVLVGYLDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYGVFDEFRYFVPGDT-MPI 150 (590)
T ss_dssp HHHHHHHTTCTTSCEEEEEEEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSSSCCHHHHCCCCCE-EEE
T ss_pred HHHhhhhccCCceEEEEeeEEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCCccCccccccCCCc-ceE
Confidence 99988 6 999999987653 36999999997 999999999999999999999999999996 789
Q ss_pred eecCCccEEEEeeccCCC-HHHHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCcc
Q 022243 146 FQTKFAKIGVAICWDQWF-PEAARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEI 223 (300)
Q Consensus 146 ~~~~~~~ig~~IC~D~~~-~~~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~ 223 (300)
|+++++|||++||||+|| |++.+.++.+|||+|++|++|+.. ......|..++++||.|| +++|+||++|.
T Consensus 151 ~~~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~-----~gk~~~~~~l~~~rA~e~~~~vv~an~~G~-- 223 (590)
T 3n05_A 151 VRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYE-----RDKDDTRLELVRKRAQEAGCTTAYLAMIGG-- 223 (590)
T ss_dssp EEETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCC-----CCSSCHHHHHHHHHHHHHTSEEEEEECEEE--
T ss_pred EEECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCccc-----cCcHHHHHHHHHHHHHHhCCEEEEEecccC--
Confidence 999999999999999999 899999999999999999997531 124578999999999999 99999999994
Q ss_pred ccccCCCcceeeccceEEECCCCCcccccCCCCCcEEEEEechhhHH
Q 022243 224 IETEHGKSQITFYGNSFIAGPTGEIVAAADDKEEAVLVAQFDLDKLK 270 (300)
Q Consensus 224 ~~~~~g~~~~~~~G~S~i~~p~G~~i~~~~~~~~~~~~~~id~~~~~ 270 (300)
.+++.|+|.|+|++|+|+++++++.++++++++++|++.++
T Consensus 224 ------~~~~~f~G~S~iidp~G~vla~~~~~~e~~~~~didl~~~~ 264 (590)
T 3n05_A 224 ------QDELVFDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAE 264 (590)
T ss_dssp ------ETTEEEEBCCEEECTTSCEEEECCBTSCEEEEEEEEECCCC
T ss_pred ------CCCeEEeCcEEEECCCCcEEEEcCCCCCcEEEEEEcccccc
Confidence 34589999999999999999999988899999999988763
No 14
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.9e-45 Score=352.04 Aligned_cols=250 Identities=17% Similarity=0.240 Sum_probs=200.6
Q ss_pred ceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHc
Q 022243 8 EVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (300)
Q Consensus 8 ~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (300)
+||||++|+++ .+|++.|++++.+++++|++.|||||||||++++||.+.+... . .. ...+..+.|.++|+++
T Consensus 5 ~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~---~--~~-~~~~~~~~l~~la~~~ 78 (634)
T 3ilv_A 5 TIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFL---T--DW-VAETAIEYCFEIAASC 78 (634)
T ss_dssp EEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGG---S--HH-HHHHHHHHHHHHHTTC
T ss_pred CeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhh---C--hh-hhHHHHHHHHHHHHhC
Confidence 69999999999 6899999999999999999999999999999999998876311 0 00 0125668899999996
Q ss_pred -CcEEeeeeeeccCCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCC---------------ceeeecCC
Q 022243 87 -GVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTG---------------FKVFQTKF 150 (300)
Q Consensus 87 -~v~iv~g~~~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~---------------~~~~~~~~ 150 (300)
+++|++|.+++.++++||+++++ ++|++++.|+|+||++++.|.|.++|+||... ..+|++++
T Consensus 79 ~~i~ivvG~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~~g 157 (634)
T 3ilv_A 79 TDITVSLGLPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVKD 157 (634)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEETT
T ss_pred CCCEEEEeeeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCCCcChhhhcCCCCccccceecccCcccccCCeEEEECC
Confidence 99999999988889999999999 89999999999999999999999999999862 16899999
Q ss_pred ccEEEEeeccCCCHH-HHHHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc-ceEEEecCCCCccccccC
Q 022243 151 AKIGVAICWDQWFPE-AARAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN-VPLVASNRIGKEIIETEH 228 (300)
Q Consensus 151 ~~ig~~IC~D~~~~~-~~~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~-~~vv~~n~~G~~~~~~~~ 228 (300)
+|||++||||+|||+ +++.++.+|||+|++|++|+. ...+..+|..++++||+|| +++|+||++|.+.
T Consensus 158 ~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~-----~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~----- 227 (634)
T 3ilv_A 158 ARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHF-----AFGKSAIRYDLVIGGSERFDCTYVYANLLGNEA----- 227 (634)
T ss_dssp EEEEECCTTC----------CGGGTCSEEEEEECCBC-----CTTHHHHHHHHHHHHHHHTTSEEEEEECEEESS-----
T ss_pred EEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCcc-----ccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCC-----
Confidence 999999999999998 899999999999999999753 1234579999999999999 9999999998542
Q ss_pred CCcceeeccceEEECCCCCcccccCCCC---CcEEEEEechhhHHhhhccCC
Q 022243 229 GKSQITFYGNSFIAGPTGEIVAAADDKE---EAVLVAQFDLDKLKSKRSSWG 277 (300)
Q Consensus 229 g~~~~~~~G~S~i~~p~G~~i~~~~~~~---~~~~~~~id~~~~~~~r~~~~ 277 (300)
+++.|+|.|+|. |+|+++++++.++ ++++++++|++.++..|..++
T Consensus 228 --~~~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~ 276 (634)
T 3ilv_A 228 --GRMIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLT 276 (634)
T ss_dssp --SSCEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC-----------
T ss_pred --CceEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCC
Confidence 348899999888 9999999998653 479999999999998887664
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=1.3e-44 Score=349.97 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=220.9
Q ss_pred cceEEEEEeCCC-CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc--chHHHhhcCCCCCChhHHHHHHHH
Q 022243 7 REVVVSALQFAC-TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ--REDFFQRAKPYKDHPTILKMQELA 83 (300)
Q Consensus 7 ~~~~Ia~~Q~~~-~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~a 83 (300)
+.||||++|+++ .+|++.|++++.+++++|++.|||||||||++++||.+.+. ...+.+.+ .+.++.|.+.|
T Consensus 11 g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~~-----~~~l~~l~~~a 85 (680)
T 3sdb_A 11 GFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAV-----EDALLDLVTES 85 (680)
T ss_dssp TEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHHH-----HHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHhh-----HHHHHHHHHHh
Confidence 579999999999 69999999999999999999999999999999999988763 22233322 36788899999
Q ss_pred HHcCcEEeeeeeeccCCceeeEEEEEcCCCCeeeeeeeccCCCCCCCCcceeecCCCCCc---------------eee--
Q 022243 84 KELGVVMPVSFFEEANNAHYNSIAIIDADGSDLGLYRKSHIPDGPGYQEKFYFNPGDTGF---------------KVF-- 146 (300)
Q Consensus 84 ~~~~v~iv~g~~~~~~~~~yN~~~vi~~~G~i~~~~~K~~l~~~~~~~e~~~~~~G~~~~---------------~~~-- 146 (300)
++++++|++|++++.++++||++++++ +|++++.|+|+||++++.|.|.++|+||.... .+|
T Consensus 86 ~~~~i~ivvG~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~ 164 (680)
T 3sdb_A 86 ADLLPVLVVGAPLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAA 164 (680)
T ss_dssp TTCSSEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEE
T ss_pred hcCCcEEEEeceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEee
Confidence 999999999999888889999999998 99999999999999999999999999998621 145
Q ss_pred -ecCCccEEEEeeccCCCHHHH-HHHHHcCCcEEEeeccCCCCCCCCCCCcHHHHHHHhhhhhhcc--ceEEEecCCCCc
Q 022243 147 -QTKFAKIGVAICWDQWFPEAA-RAMVLQGAEILFYPTAIGSEPQDDGLDSRDHWRRVMQGHAGAN--VPLVASNRIGKE 222 (300)
Q Consensus 147 -~~~~~~ig~~IC~D~~~~~~~-~~~~~~gadlii~ps~~~~~~~~~~~~~~~~~~~~~~~~A~e~--~~vv~~n~~G~~ 222 (300)
+++++|||++||||+|||+.. +.++.+|||+|++|++|+. +....+.|..+++.+|.+. +||+.+|..|.+
T Consensus 165 ~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~-----~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~ 239 (680)
T 3sdb_A 165 SDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPI-----TIGRAEDRRLLARSASARCLAAYVYAAAGEGES 239 (680)
T ss_dssp TTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCC-----CTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSC
T ss_pred eccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCcc-----ccCcHHHHHHHHHHHHHHhCCcEEEEECCcccC
Confidence 689999999999999999985 8999999999999999754 2234466777888887776 555544446653
Q ss_pred cccccCCCcceeeccceEEECCCCCcccccCCC--CCcEEEEEechhhHHhhhccCCCccccCh
Q 022243 223 IIETEHGKSQITFYGNSFIAGPTGEIVAAADDK--EEAVLVAQFDLDKLKSKRSSWGVFRDRRP 284 (300)
Q Consensus 223 ~~~~~~g~~~~~~~G~S~i~~p~G~~i~~~~~~--~~~~~~~~id~~~~~~~r~~~~~~~~~~~ 284 (300)
. +++.|+|.|+|+ |+|+++++++.+ +++++++++|++.++..|..+++++|+|.
T Consensus 240 ~-------~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~~ 295 (680)
T 3sdb_A 240 T-------TDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRR 295 (680)
T ss_dssp C-------SSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHHH
T ss_pred C-------CCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhhh
Confidence 2 348899999999 999999999887 89999999999999999999999888764
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=79.53 E-value=5.7 Score=33.54 Aligned_cols=70 Identities=20% Similarity=0.306 Sum_probs=43.2
Q ss_pred HHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-eccCC-ceeeEEEEE
Q 022243 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAII 109 (300)
Q Consensus 32 ~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~~~-~~yN~~~vi 109 (300)
..+.....|+|+|+.|=.+...+ ...+...++..|.+.+++++.... -..++ ..+=.+.++
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~~~~-----------------~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 235 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALAGDE-----------------TSVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVV 235 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCBSCC-----------------THHHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCcc-----------------cHHHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEE
Confidence 33444567999999996432211 013345567778899999885432 12222 334457888
Q ss_pred cCCCCeeee
Q 022243 110 DADGSDLGL 118 (300)
Q Consensus 110 ~~~G~i~~~ 118 (300)
+|+|+++..
T Consensus 236 ~p~G~vl~~ 244 (283)
T 3hkx_A 236 GPAGQPLGE 244 (283)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEe
Confidence 999998753
No 17
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=76.21 E-value=10 Score=32.24 Aligned_cols=73 Identities=10% Similarity=0.124 Sum_probs=47.7
Q ss_pred eEEEEEeCCCC------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHH
Q 022243 9 VVVSALQFACT------DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQEL 82 (300)
Q Consensus 9 ~~Ia~~Q~~~~------~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 82 (300)
++|..++.... ...+...+.+.+.++.|+.-|+..|++|-. +. ......+ +.. .+.+..+.+.
T Consensus 90 L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~---~~~~~~~-~~~-----~~~l~~l~~~ 158 (305)
T 3obe_A 90 LRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--PR---IENEDDA-KVV-----SEIFNRAGEI 158 (305)
T ss_dssp CEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--CC---CSSHHHH-HHH-----HHHHHHHHHH
T ss_pred CeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--CC---CCCHHHH-HHH-----HHHHHHHHHH
Confidence 66776665541 234677888999999999999999999831 11 1111112 211 1456778888
Q ss_pred HHHcCcEEee
Q 022243 83 AKELGVVMPV 92 (300)
Q Consensus 83 a~~~~v~iv~ 92 (300)
|+++|+.+.+
T Consensus 159 a~~~Gv~l~l 168 (305)
T 3obe_A 159 TKKAGILWGY 168 (305)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 8999988764
No 18
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=74.96 E-value=8.5 Score=32.37 Aligned_cols=67 Identities=12% Similarity=0.009 Sum_probs=41.8
Q ss_pred HHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-eccC-CceeeEEEEEcCC
Q 022243 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEAN-NAHYNSIAIIDAD 112 (300)
Q Consensus 35 ~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~~-~~~yN~~~vi~~~ 112 (300)
.....|+|+|+.|=.+ +. .. ...+...++..|.+++++++.... -..+ ..++=.+.+++|+
T Consensus 177 ~~~~~Gadli~~psa~-~~---~~-------------~~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~ 239 (281)
T 3p8k_A 177 YPARSGAKIAFYVAQW-PM---SR-------------LQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPN 239 (281)
T ss_dssp HHHHTTCCEEEEEECC-BG---GG-------------HHHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEECTT
T ss_pred HHHHCCCCEEEECCCC-CC---cc-------------HHHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEECCC
Confidence 3446799999999532 11 00 013445567788899999985432 2222 2445567888999
Q ss_pred CCeeee
Q 022243 113 GSDLGL 118 (300)
Q Consensus 113 G~i~~~ 118 (300)
|+++..
T Consensus 240 G~vl~~ 245 (281)
T 3p8k_A 240 GDLVGE 245 (281)
T ss_dssp SCEEEE
T ss_pred CCEEEe
Confidence 998754
No 19
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=72.74 E-value=7.6 Score=32.72 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=41.5
Q ss_pred HHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeeec---cCCceeeEEEEEc
Q 022243 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEE---ANNAHYNSIAIID 110 (300)
Q Consensus 34 ~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~~---~~~~~yN~~~vi~ 110 (300)
+.....|+|+|+.|-.+.. ... ...+...++..|.+.+++++...... .+..++=.+.+++
T Consensus 179 r~l~~~Ga~ll~~ps~~~~----~~~------------~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 242 (291)
T 1f89_A 179 MLSARKGAFAMIYPSAFNT----VTG------------PLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVD 242 (291)
T ss_dssp HHHHHTTEEEEEEECCCBT----THH------------HHHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEEC
T ss_pred HHHHhhCCCEEEECCcCCC----CCc------------HHHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEEC
Confidence 3334579999999952211 000 01344556777889999988654221 1223455778999
Q ss_pred CCCCeee
Q 022243 111 ADGSDLG 117 (300)
Q Consensus 111 ~~G~i~~ 117 (300)
|+|+++.
T Consensus 243 p~G~vl~ 249 (291)
T 1f89_A 243 PRGKIVA 249 (291)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 9999875
No 20
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=72.50 E-value=11 Score=31.29 Aligned_cols=66 Identities=18% Similarity=0.014 Sum_probs=41.7
Q ss_pred HHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-ccCC-ceeeEEEEEc
Q 022243 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EANN-AHYNSIAIID 110 (300)
Q Consensus 33 i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~~~-~~yN~~~vi~ 110 (300)
.+.....|+|+|+.|=.+.. ..+...++..|.+++++++..... ..++ ..+=.+.+++
T Consensus 155 ~r~~~~~ga~li~~ps~~~~--------------------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 214 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLVM--------------------PYAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIAS 214 (262)
T ss_dssp HHHHHHTTCSEEEEEECCCS--------------------SCHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEEC
T ss_pred HHHHHHCCCCEEEEcCCCCc--------------------hHHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEEC
Confidence 33445679999999975311 023455677888999998855321 1112 2344578889
Q ss_pred CCCCeeee
Q 022243 111 ADGSDLGL 118 (300)
Q Consensus 111 ~~G~i~~~ 118 (300)
|+|+++..
T Consensus 215 p~G~il~~ 222 (262)
T 3ivz_A 215 PKAEVLSM 222 (262)
T ss_dssp TTSCEEEE
T ss_pred CCCCEeec
Confidence 99998754
No 21
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=69.78 E-value=27 Score=28.63 Aligned_cols=61 Identities=7% Similarity=-0.033 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCc-cchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
.+..++.+.+.++.|+.-|++.|++. +| .+.. ..++..+.. .+.+..+.+.|+++|+.+.+
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~----~g-~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAM----SG-ITEGLDRKACEETF-----IENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECC----BC-BCTTSCHHHHHHHH-----HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEc----cC-CCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 46778899999999999999998873 22 1111 111112211 14567778888888987654
No 22
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=69.78 E-value=17 Score=31.45 Aligned_cols=69 Identities=19% Similarity=0.074 Sum_probs=43.1
Q ss_pred HHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-cc-CCceeeEEEEE
Q 022243 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EA-NNAHYNSIAII 109 (300)
Q Consensus 32 ~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~-~~~~yN~~~vi 109 (300)
+.+.....|||+|+.|=.+... . ...+...++..|.+++++++..... .+ +...+=.+.++
T Consensus 174 ~~r~~~~~Gadlil~psaw~~~----~-------------~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYSTQ----V-------------NDQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQIC 236 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSCTT----S-------------HHHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCCCC----c-------------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEE
Confidence 3344455799999998632110 0 0144556677888999998855321 11 22455677889
Q ss_pred cCCCCeee
Q 022243 110 DADGSDLG 117 (300)
Q Consensus 110 ~~~G~i~~ 117 (300)
+|+|+++.
T Consensus 237 dp~G~vla 244 (334)
T 2dyu_A 237 NFDGTTLV 244 (334)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEee
Confidence 99999875
No 23
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=69.19 E-value=12 Score=32.52 Aligned_cols=69 Identities=23% Similarity=0.292 Sum_probs=43.3
Q ss_pred HHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-ccC-CceeeEEEEE
Q 022243 32 LVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN-NAHYNSIAII 109 (300)
Q Consensus 32 ~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~~-~~~yN~~~vi 109 (300)
+.+.....|||+|+.|-.+. + .. ...+...++..|.+++++++..... .++ ..++=.+.++
T Consensus 174 ~~r~l~~~Gadlll~psa~~--~--~~-------------~~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYM--Y--PA-------------KDQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAII 236 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCB--T--TC-------------HHHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEE
T ss_pred HHHHHHHcCCCEEEEcCCCC--C--Cc-------------HHHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEE
Confidence 34444557999999995421 1 00 0245566777888999998854321 122 2344467888
Q ss_pred cCCCCeee
Q 022243 110 DADGSDLG 117 (300)
Q Consensus 110 ~~~G~i~~ 117 (300)
+|+|+++.
T Consensus 237 dp~G~vla 244 (341)
T 2uxy_A 237 GFDGRTLG 244 (341)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 99999875
No 24
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=67.73 E-value=12 Score=31.28 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=41.2
Q ss_pred HHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-cc--CCceeeEEEEEc
Q 022243 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EA--NNAHYNSIAIID 110 (300)
Q Consensus 34 ~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~--~~~~yN~~~vi~ 110 (300)
+.....|+|+|+.|-.+.. ... ...+...++..|.+++++++..... .+ +...+=.+.+++
T Consensus 163 r~~~~~ga~ll~~ps~~~~----~~~------------~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 226 (276)
T 2w1v_A 163 QIYAQRGCQLLVYPGAFNL----TTG------------PAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVD 226 (276)
T ss_dssp HHHHHTTEEEEEEECCCCT----THH------------HHHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEEC
T ss_pred HHHHHcCCCEEEECCcCCC----cCC------------HHHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEEC
Confidence 3344579999999953211 000 0134455667788999998865422 11 123445678899
Q ss_pred CCCCeee
Q 022243 111 ADGSDLG 117 (300)
Q Consensus 111 ~~G~i~~ 117 (300)
|+|+++.
T Consensus 227 p~G~v~~ 233 (276)
T 2w1v_A 227 PWGQVLT 233 (276)
T ss_dssp TTSCEEE
T ss_pred CCCCEeE
Confidence 9999875
No 25
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=65.84 E-value=4.3 Score=32.80 Aligned_cols=46 Identities=17% Similarity=0.356 Sum_probs=25.8
Q ss_pred CCCCCCcceEEEEEeCCCC----CCHHHHHHHHHHHHHHHHhCCCeEEEeccc
Q 022243 1 MEKGKRREVVVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (300)
Q Consensus 1 ~~~~~~~~~~Ia~~Q~~~~----~~~~~n~~~~~~~i~~A~~~~~dliVfPE~ 49 (300)
|+++..+.+++-++..|+. .+.....+.+.++|+ +.++|+|+|-|.
T Consensus 4 ~~~~~~~~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 53 (256)
T 4fva_A 4 MTAEDLKGFEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 53 (256)
T ss_dssp ----CCTTCEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CCCCcCCCCEEEEEEEecCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEec
Confidence 3444444455555666662 234444555555554 458999999995
No 26
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=63.39 E-value=11 Score=35.25 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=45.4
Q ss_pred HHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-eccCC-ceeeEEEEEc
Q 022243 33 VRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAIID 110 (300)
Q Consensus 33 i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~~~-~~yN~~~vi~ 110 (300)
.+.+...||++|+.|=.+. +... . ...+...++..|.+++++++.... -.+++ .++-.+++++
T Consensus 178 ~r~la~~GA~ii~~psAs~--~~~g--k-----------~~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~iid 242 (565)
T 4f4h_A 178 AQLAKAAGAQVLIVPNGSP--YHMN--K-----------DAVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 242 (565)
T ss_dssp HHHHHHTTCSEEEEEECCB--CCTT--H-----------HHHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEEC
T ss_pred hHHHHhCCCeeeecccccc--cccC--c-----------HHHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCcceec
Confidence 3344567999999996432 1110 0 013446678888999998875432 22233 5677889999
Q ss_pred CCCCeeee
Q 022243 111 ADGSDLGL 118 (300)
Q Consensus 111 ~~G~i~~~ 118 (300)
|+|+++..
T Consensus 243 p~G~vla~ 250 (565)
T 4f4h_A 243 GAGELVAK 250 (565)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99998764
No 27
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=63.15 E-value=46 Score=26.87 Aligned_cols=62 Identities=10% Similarity=-0.044 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc-chHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
.+..++.+.+.++.|+.-|+..|++. +|..+... ..+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF-----IDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH-----HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 46788899999999999999998873 23322111 11112211 14566777888888887654
No 28
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=62.46 E-value=22 Score=29.63 Aligned_cols=62 Identities=16% Similarity=0.275 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|++.|+++= ...+. .....+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~--~~~~~-~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 165 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAG--YDVYY-QEANNETRRRF-----RDGLKESVEMASRAQVTLAM 165 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECC--CSCSS-SCCCHHHHHHH-----HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECC--CCCCc-CcCHHHHHHHH-----HHHHHHHHHHHHHhCCEEEE
Confidence 45678889999999999999999871 11111 11111122211 14567777888888987654
No 29
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=61.43 E-value=22 Score=29.38 Aligned_cols=61 Identities=13% Similarity=-0.060 Sum_probs=39.0
Q ss_pred CCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-eccCC--ceeeEEEEEcCCCCee
Q 022243 40 GANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN--AHYNSIAIIDADGSDL 116 (300)
Q Consensus 40 ~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~~~--~~yN~~~vi~~~G~i~ 116 (300)
|+|+|+.|-.+... . ...+...++..|.+++++++.... -..++ ..+=.+.+++|+|+++
T Consensus 165 ga~~i~~~s~w~~~----~-------------~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~ 227 (266)
T 2e11_A 165 DFDLQLFVANWPSA----R-------------AYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQ 227 (266)
T ss_dssp SCSEEEEEECCCGG----G-------------HHHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEE
T ss_pred CCcEEEEeCCCCCC----c-------------hHHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCcee
Confidence 89999988752110 0 013445567788899999885532 22222 3455788899999987
Q ss_pred e
Q 022243 117 G 117 (300)
Q Consensus 117 ~ 117 (300)
.
T Consensus 228 ~ 228 (266)
T 2e11_A 228 V 228 (266)
T ss_dssp E
T ss_pred e
Confidence 5
No 30
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=61.28 E-value=18 Score=30.10 Aligned_cols=61 Identities=10% Similarity=0.054 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
.+..++.+.+.++.|+.-|++.|++. +|+.+.. ..+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~----~G~~~~~-~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLH----IGFVPES-SSPDYSEL-----VRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEC----CCCCCCT-TSHHHHHH-----HHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEc----CCCCccc-chHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 46778899999999999999998874 2332222 11112211 14567778888889987655
No 31
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=61.26 E-value=22 Score=29.48 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=45.2
Q ss_pred ceEEEEEeCCC-----CCC---HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCC-ccchHHHhhcCCCCCChhHHH
Q 022243 8 EVVVSALQFAC-----TDD---VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQ-AQREDFFQRAKPYKDHPTILK 78 (300)
Q Consensus 8 ~~~Ia~~Q~~~-----~~~---~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 78 (300)
.|+|..+.... ..+ .+..++.+.+.++.|..-|++.|+++=.. ..+... ....+..+.. .+.+..
T Consensus 77 gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~-~~~~~~~p~~~~~~~~~-----~~~l~~ 150 (287)
T 3kws_A 77 NIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAF-NGQVPALPHTMETRDFL-----CEQFNE 150 (287)
T ss_dssp SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCC-TTCCSBCCSSHHHHHHH-----HHHHHH
T ss_pred CCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc-CCcCCCCCCHHHHHHHH-----HHHHHH
Confidence 36666555432 123 25677888999999999999988874211 111000 0111122222 145677
Q ss_pred HHHHHHHcCcEEee
Q 022243 79 MQELAKELGVVMPV 92 (300)
Q Consensus 79 l~~~a~~~~v~iv~ 92 (300)
+.+.|+++|+.+.+
T Consensus 151 l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 151 MGTFAAQHGTSVIF 164 (287)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCEEEE
Confidence 78888888887554
No 32
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=54.98 E-value=28 Score=28.42 Aligned_cols=75 Identities=12% Similarity=0.189 Sum_probs=43.9
Q ss_pred eEEEEEeCCC--C-CCH---HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc-chHHHhhcCCCCCChhHHHHHH
Q 022243 9 VVVSALQFAC--T-DDV---STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ-REDFFQRAKPYKDHPTILKMQE 81 (300)
Q Consensus 9 ~~Ia~~Q~~~--~-~~~---~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 81 (300)
+++..++... . .+. +...+.+.+.++.|+.-|++.|++. +|+...+. ..+..+.. .+.+..+.+
T Consensus 60 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~-----~~~l~~l~~ 130 (278)
T 1i60_A 60 IKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS-----VDVLTELSD 130 (278)
T ss_dssp CEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH-----HHHHHHHHH
T ss_pred CCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH-----HHHHHHHHH
Confidence 5666555432 1 232 4567888999999999999988872 23222111 11112211 145667777
Q ss_pred HHHHcCcEEee
Q 022243 82 LAKELGVVMPV 92 (300)
Q Consensus 82 ~a~~~~v~iv~ 92 (300)
.|+++|+.+.+
T Consensus 131 ~a~~~gv~l~l 141 (278)
T 1i60_A 131 IAEPYGVKIAL 141 (278)
T ss_dssp HHGGGTCEEEE
T ss_pred HHHhcCCEEEE
Confidence 88888887654
No 33
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=54.92 E-value=60 Score=26.61 Aligned_cols=76 Identities=14% Similarity=0.003 Sum_probs=46.2
Q ss_pred ceEEEEEeCCC----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCc-cchHHHhhcCCCCCChhHHHHHHH
Q 022243 8 EVVVSALQFAC----TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQA-QREDFFQRAKPYKDHPTILKMQEL 82 (300)
Q Consensus 8 ~~~Ia~~Q~~~----~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 82 (300)
.++|..+.... ....+..++.+.+.++.|+.-|+..|++. +|..... ...+..+.. .+.+..+.+.
T Consensus 61 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~----~g~~~~~~~~~~~~~~~-----~~~l~~l~~~ 131 (286)
T 3dx5_A 61 TLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTF----AGQKGSADFSQQERQEY-----VNRIRMICEL 131 (286)
T ss_dssp TCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEEC----SCSSCGGGSCHHHHHHH-----HHHHHHHHHH
T ss_pred CCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCCCcccCcHHHHHHH-----HHHHHHHHHH
Confidence 35666664332 34567888999999999999999988651 2221111 111111211 1456777888
Q ss_pred HHHcCcEEee
Q 022243 83 AKELGVVMPV 92 (300)
Q Consensus 83 a~~~~v~iv~ 92 (300)
|+++|+.+.+
T Consensus 132 a~~~Gv~l~l 141 (286)
T 3dx5_A 132 FAQHNMYVLL 141 (286)
T ss_dssp HHHTTCEEEE
T ss_pred HHHhCCEEEE
Confidence 8899987654
No 34
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=54.34 E-value=65 Score=26.99 Aligned_cols=59 Identities=7% Similarity=0.018 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcE--Eee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV--MPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~--iv~ 92 (300)
+...+.+.+.++.|+.-|+..|++|-. +. .. ..+..+.. -+.+..+.+.|+++|+. +.+
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~---~~-~~~~~~~~-----~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 104 PKIMEYWKATAADHAKLGCKYLIQPMM--PT---IT-THDEAKLV-----CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSC--CC---CC-SHHHHHHH-----HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--CC---CC-CHHHHHHH-----HHHHHHHHHHHHHCCCcceEEE
Confidence 677889999999999999999999732 11 11 11111211 14567788888999988 553
No 35
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=53.23 E-value=48 Score=27.75 Aligned_cols=65 Identities=14% Similarity=0.038 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCc--cchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA--QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|+..|+.|=++..|..... ...+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 103 ~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 169 (309)
T 2hk0_A 103 AAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG-----VEGINGIADFANDLGINLCI 169 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 566788999999999999999986522111321111 111112211 14567777888888887654
No 36
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=52.85 E-value=42 Score=31.52 Aligned_cols=70 Identities=20% Similarity=0.237 Sum_probs=43.5
Q ss_pred HHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-eccCC-ceeeEEEEEcC
Q 022243 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEANN-AHYNSIAIIDA 111 (300)
Q Consensus 34 ~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~~~-~~yN~~~vi~~ 111 (300)
+.....|||+|+.|=.+ ++... ....+...++..|.+++++++.... -..++ .+.=.+++++|
T Consensus 174 ~~la~~Ga~ii~~psa~--p~~~g-------------k~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iidp 238 (590)
T 3n05_A 174 PAARSAGAGLLLSVNAS--PYERD-------------KDDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR 238 (590)
T ss_dssp HHHHHTTCSEEEEEECC--BCCCC-------------SSCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEECT
T ss_pred HHHHHcCCCEEEEecCC--ccccC-------------cHHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEECC
Confidence 34456799999998643 22110 0124556778889999999885432 12223 33446778899
Q ss_pred CCCeeee
Q 022243 112 DGSDLGL 118 (300)
Q Consensus 112 ~G~i~~~ 118 (300)
+|+++..
T Consensus 239 ~G~vla~ 245 (590)
T 3n05_A 239 DGEVVAR 245 (590)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998754
No 37
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=51.71 E-value=31 Score=27.92 Aligned_cols=61 Identities=13% Similarity=-0.025 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCcc---chHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQ---REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|+..|++.= |+..... ..+..+.. -+.+..+.+.|+++|+.+.+
T Consensus 72 ~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 135 (254)
T 3ayv_A 72 GLTLRRLLFGLDRAAELGADRAVFHS----GIPHGRTPEEALERALPL-----AEALGLVVRRARTLGVRLLL 135 (254)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEC----CCCTTCCHHHHHHTHHHH-----HHHTHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECC----CCCcccccccHHHHHHHH-----HHHHHHHHHHHhhcCCEEEE
Confidence 55678889999999999999887742 2221111 01111111 13456677778888887654
No 38
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=51.32 E-value=29 Score=28.33 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCc--cchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQA--QREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|++.|+++= |+.+.. ...+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 79 ~~~~~~~~~~i~~a~~lG~~~v~~~~----g~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 79 EKAIDDNRRAVDEAAELGADCLVLVA----GGLPGGSKNIDAARRMV-----VEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCEEEEC----BCCCTTCCCHHHHHHHH-----HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEee----CCCCCCCcCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 55678899999999999999888762 221110 111112211 14567778888888887554
No 39
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=50.86 E-value=64 Score=26.93 Aligned_cols=41 Identities=17% Similarity=0.067 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCcEEeeeee-ec-cCCceeeEEEEEcCCCCeee
Q 022243 77 LKMQELAKELGVVMPVSFF-EE-ANNAHYNSIAIIDADGSDLG 117 (300)
Q Consensus 77 ~~l~~~a~~~~v~iv~g~~-~~-~~~~~yN~~~vi~~~G~i~~ 117 (300)
..++..|.+++++++.... -. .+...+-.+.+++|+|+++.
T Consensus 217 ~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~ 259 (303)
T 1uf5_A 217 LSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVA 259 (303)
T ss_dssp HHHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEE
T ss_pred HHHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEec
Confidence 4456778899999985532 11 12234555788899999875
No 40
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=47.77 E-value=46 Score=29.50 Aligned_cols=41 Identities=5% Similarity=0.123 Sum_probs=31.2
Q ss_pred eEEEEEeCCC--------CCCHHHHHHHHHHHHHHHHhCCCeEEEeccc
Q 022243 9 VVVSALQFAC--------TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (300)
Q Consensus 9 ~~Ia~~Q~~~--------~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~ 49 (300)
++|.+++... ..+.++.++.+.+.|+.|++.|+.+|+...+
T Consensus 78 L~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 78 LEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp CEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 6777765321 2456888999999999999999999997433
No 41
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=46.51 E-value=26 Score=31.19 Aligned_cols=65 Identities=15% Similarity=0.056 Sum_probs=37.8
Q ss_pred HHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-ccC---------------
Q 022243 36 AHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EAN--------------- 99 (300)
Q Consensus 36 A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~~--------------- 99 (300)
....|||+|+.|=.+.... ....+...++..|.+++++++..... ...
T Consensus 246 la~~GAdill~psa~~~~~----------------~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~~ 309 (405)
T 2vhh_A 246 FGLNGAEIVFNPSATIGRL----------------SEPLWSIEARNAAIANSYFTVPINRVGTEQFPNEYTSGDGNKAHK 309 (405)
T ss_dssp HHHTTCSEEEEEECCBCTT----------------THHHHHHHHHHHHHHHTSEEEEEECEECCCCC-------------
T ss_pred HHHcCCCEEEEcccCCCCC----------------CHHHHHHHHHHHHHHcCceEEEeccccccccccccccccCccccc
Confidence 3456999999998432110 00134455667788899998854321 110
Q ss_pred --CceeeEEEEEcCCCCee
Q 022243 100 --NAHYNSIAIIDADGSDL 116 (300)
Q Consensus 100 --~~~yN~~~vi~~~G~i~ 116 (300)
..++=.+.+++|+|+++
T Consensus 310 ~~~~f~G~S~IidP~G~vl 328 (405)
T 2vhh_A 310 EFGPFYGSSYVAAPDGSRT 328 (405)
T ss_dssp ----EECCCCCBCTTSCBC
T ss_pred cCceeccccceECCCCCEe
Confidence 12344567778888875
No 42
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=46.23 E-value=70 Score=26.34 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccc--cCCCccCC------cc-chHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQEL--FEGYYFCQ------AQ-REDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~--~~~g~~~~------~~-~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
.+..++.+.+.++.|+.-|++.|+++.. +..|.... .. ..+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV-----CKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 3456778899999999999999888652 11122110 00 11112211 14567778888889987654
No 43
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=46.17 E-value=21 Score=32.03 Aligned_cols=69 Identities=12% Similarity=0.020 Sum_probs=41.6
Q ss_pred HHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeee-cc-C-CceeeEEEEEc
Q 022243 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFE-EA-N-NAHYNSIAIID 110 (300)
Q Consensus 34 ~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~-~~-~-~~~yN~~~vi~ 110 (300)
+.....|+|+++.|-.+... .. ...+...++..|.+.+++++..... .. + ...+=.+.+++
T Consensus 179 r~l~~~Ga~il~~psa~~~~----------~~------~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~ 242 (440)
T 1ems_A 179 LWNRKRGAQLLSFPSAFTLN----------TG------LAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVD 242 (440)
T ss_dssp HHHHHTTCSEEECCBCCCHH----------HH------HHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEEC
T ss_pred HHHHHcCCcEEEECCcCCCC----------Cc------HHHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEEC
Confidence 33345799999998532100 00 0134455667788999998865321 11 1 13344678899
Q ss_pred CCCCeeee
Q 022243 111 ADGSDLGL 118 (300)
Q Consensus 111 ~~G~i~~~ 118 (300)
|+|+++..
T Consensus 243 P~G~vla~ 250 (440)
T 1ems_A 243 PWGAVVAQ 250 (440)
T ss_dssp TTSCEEEE
T ss_pred CCCCeecc
Confidence 99998764
No 44
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=46.08 E-value=58 Score=28.82 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEe----ccccCCCcc--CCc------cchHHHhhcCCCCCChhHHHHHHHHHHcCc
Q 022243 21 DVSTNLATAERLVRAAHGKGANIILI----QELFEGYYF--CQA------QREDFFQRAKPYKDHPTILKMQELAKELGV 88 (300)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dliVf----PE~~~~g~~--~~~------~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v 88 (300)
|-...++++.++++.|++.|||.|=| |+..++.+. ... ...+.++..+ ...+++..|.+.|++.|+
T Consensus 38 NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~--l~~e~~~~L~~~~~~~Gi 115 (385)
T 1vli_A 38 NHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSME--MPAEWILPLLDYCREKQV 115 (385)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBS--SCGGGHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcC--CCHHHHHHHHHHHHHcCC
Confidence 44556778889999999999999988 666545443 110 0002222222 235888999999999999
Q ss_pred EEeeee
Q 022243 89 VMPVSF 94 (300)
Q Consensus 89 ~iv~g~ 94 (300)
.++..-
T Consensus 116 ~~~stp 121 (385)
T 1vli_A 116 IFLSTV 121 (385)
T ss_dssp EEECBC
T ss_pred cEEEcc
Confidence 988654
No 45
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=45.62 E-value=54 Score=25.14 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEe
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv 91 (300)
.+...+.+.++++.+.+.++.+|++--...+. .......... ..+-+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~----~~~~~~~~~~-----~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEP----NRSDPMRKTV-----DAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCC----CTTSHHHHHH-----HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCC----CcchHHHHHH-----HHHHHHHHHHHHHcCCeEE
Confidence 56677788888888877799998882111111 1010111111 2456788899999887654
No 46
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=44.18 E-value=87 Score=25.28 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=41.4
Q ss_pred eEEEEEeCC--CCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHc
Q 022243 9 VVVSALQFA--CTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKEL 86 (300)
Q Consensus 9 ~~Ia~~Q~~--~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 86 (300)
++|..++.. +....+...+.+.+.++.|+.-|++.|++ .+|+..... +.... .+.+..+.+.|+++
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~----~~g~~~~~~---~~~~~-----~~~l~~l~~~a~~~ 132 (272)
T 2q02_A 65 LEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVL----CPLNDGTIV---PPEVT-----VEAIKRLSDLFARY 132 (272)
T ss_dssp CEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEE----CCCCSSBCC---CHHHH-----HHHHHHHHHHHHTT
T ss_pred CeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEE----ccCCCchhH---HHHHH-----HHHHHHHHHHHHHc
Confidence 667555542 21112456688899999999999998875 122211110 11100 14456677788888
Q ss_pred CcEEee
Q 022243 87 GVVMPV 92 (300)
Q Consensus 87 ~v~iv~ 92 (300)
|+.+.+
T Consensus 133 gv~l~~ 138 (272)
T 2q02_A 133 DIQGLV 138 (272)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 887554
No 47
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=43.29 E-value=40 Score=29.61 Aligned_cols=64 Identities=11% Similarity=-0.024 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcE
Q 022243 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (300)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~ 89 (300)
+...|++.+.+.++..++.|..++||||-.=+.-.+.+. +......+....+-+..+|.+.++.
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g-----~l~~~~Fk~gs~~~~~~LA~ksg~P 267 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTG-----EWYPAPFDASSVDNMRRLIQHSDVP 267 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTC-----CBCCCCCCHHHHHHHHHHHHTSSSC
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCC-----ccccccccchhhhHHHHHHHHcCCC
Confidence 455677777777777777799999999953221000000 0001012224567778899988766
No 48
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=42.99 E-value=76 Score=26.84 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEecc
Q 022243 23 STNLATAERLVRAAHGKGANIILIQE 48 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE 48 (300)
+..++.+.+.++.|+.-|++.|+-|=
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~~~~ 130 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMMGPI 130 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEeccc
Confidence 45678889999999999999997664
No 49
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=40.64 E-value=71 Score=25.95 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=43.6
Q ss_pred eEEEEEeCCC--CC---CHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHH
Q 022243 9 VVVSALQFAC--TD---DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELA 83 (300)
Q Consensus 9 ~~Ia~~Q~~~--~~---~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a 83 (300)
+++..+.... .. +.+..++.+.+.++.|+.-|+..|+++= .++.. .. ..+..+.. -+.+..+.+.|
T Consensus 61 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~p~~~-~~-~~~~~~~~-----~~~l~~l~~~a 131 (281)
T 3u0h_A 61 LVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAFL--WPSMD-EE-PVRYISQL-----ARRIRQVAVEL 131 (281)
T ss_dssp CEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEEC--CSEES-SC-HHHHHHHH-----HHHHHHHHHHH
T ss_pred CceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEee--cCCCC-Cc-chhhHHHH-----HHHHHHHHHHH
Confidence 5665555443 11 2345567788899999999999998541 11110 00 11111111 14566777888
Q ss_pred HHcCcEEee
Q 022243 84 KELGVVMPV 92 (300)
Q Consensus 84 ~~~~v~iv~ 92 (300)
+++|+.+.+
T Consensus 132 ~~~Gv~l~l 140 (281)
T 3u0h_A 132 LPLGMRVGL 140 (281)
T ss_dssp GGGTCEEEE
T ss_pred HHcCCEEEE
Confidence 899988765
No 50
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=39.28 E-value=89 Score=27.12 Aligned_cols=69 Identities=4% Similarity=-0.086 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeee
Q 022243 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSF 94 (300)
Q Consensus 25 n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~ 94 (300)
..++..+.++.+++.|++-||+--...-|+......-..... ......+.+..+.+.|+++|+-+.+|.
T Consensus 52 d~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~-~~~p~~Dlv~~~l~aa~k~Gmkv~~Gl 120 (340)
T 4h41_A 52 GEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKG-CYMPSVDLVDMYLRLAEKYNMKFYFGL 120 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTT-CCCCSBCHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccC-ccCCcccHHHHHHHHHHHhCCeEEEec
Confidence 345666777777888999999865544454332211111111 112245678999999999999998875
No 51
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A*
Probab=38.55 E-value=23 Score=28.22 Aligned_cols=40 Identities=5% Similarity=0.076 Sum_probs=23.1
Q ss_pred cceEEEEEeCCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccc
Q 022243 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (300)
Q Consensus 7 ~~~~Ia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~ 49 (300)
.+|||..+-.+- ..+.....+.+.++|+ +.++|+|+|-|.
T Consensus 8 ~~l~v~swNi~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 49 (256)
T 4gz1_A 8 STISFITWNIDGLDGCNLPERARGVCSCLA---LYSPDVVFLQEV 49 (256)
T ss_dssp GEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CcEEEEEEEcCCCcCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 345555544332 1234444555555554 448999999994
No 52
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=38.02 E-value=45 Score=27.38 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCc--c-CCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYY--F-CQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|+..|+.|=....|. . ......+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~gv~l~l 151 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA-----IESVRRVIKVAEDYGIIYAL 151 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH-----HHHHHTTHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 45678889999999999999988642111122 1 111111112211 14456677788888887654
No 53
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=36.50 E-value=1.1e+02 Score=23.61 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEe
Q 022243 21 DVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMP 91 (300)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv 91 (300)
+.+...+.+.++++.+++.++.+++..=.....+..........+.. ..+-+.++++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i-----~~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKI-----QSLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHH-----HHHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHH-----HHHHHHHHHHHHhcCCeEe
Confidence 45666777788888877888988775211111100000000000000 1345677888999887654
No 54
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=36.49 E-value=38 Score=29.09 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=19.1
Q ss_pred eeeEEEEEcCCCCeeeeeeeccC
Q 022243 102 HYNSIAIIDADGSDLGLYRKSHI 124 (300)
Q Consensus 102 ~yN~~~vi~~~G~i~~~~~K~~l 124 (300)
.+-+.++||++|.|...|+|...
T Consensus 101 ~~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 101 TVRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp ECCEEEEECTTSBEEEEEESCCS
T ss_pred CccEEEEECCCCEEEEEEeCCCc
Confidence 45578999999999988988764
No 55
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=35.73 E-value=2.1e+02 Score=24.54 Aligned_cols=38 Identities=8% Similarity=0.160 Sum_probs=29.0
Q ss_pred eEEEEEeCCC-C-------CCHHHHHHHHHHHHHHHHhCCCeEEEe
Q 022243 9 VVVSALQFAC-T-------DDVSTNLATAERLVRAAHGKGANIILI 46 (300)
Q Consensus 9 ~~Ia~~Q~~~-~-------~~~~~n~~~~~~~i~~A~~~~~dliVf 46 (300)
++|.+++... . ...+..++.+.+.++.|++.|+.+|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 6666665433 1 245778888999999999999999998
No 56
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=34.75 E-value=1.2e+02 Score=25.49 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVS 93 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g 93 (300)
..|++.+.++++.+.+.|.+++=+.=-+++-|......-...... .+.++.+.+.++++++.+.+.
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~-----~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAY-----EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHH-----HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCC-----HHHHHHHHHHHHHcCCeEEEe
Confidence 789999999999999999888877332322221100000001100 134577889999999866543
No 57
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=34.30 E-value=1.2e+02 Score=24.36 Aligned_cols=69 Identities=16% Similarity=0.091 Sum_probs=38.4
Q ss_pred HHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeeeeccCCceeeEEEEEcCCCC
Q 022243 35 AAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGS 114 (300)
Q Consensus 35 ~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~~~~~~~~yN~~~vi~~~G~ 114 (300)
.|-..+++++++=|=+.. ..+. ......+.|.+++++.+.+|++-+-...--.+.+..+++ .+|+
T Consensus 158 ral~~~p~llllDEPts~------LD~~--------~~~~i~~~l~~l~~~~g~tvi~vtHd~~~~~~~d~i~~l-~~G~ 222 (235)
T 3tif_A 158 RALANNPPIILADQPTWA------LDSK--------TGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYL-KDGE 222 (235)
T ss_dssp HHHTTCCSEEEEESTTTT------SCHH--------HHHHHHHHHHHHHHHHCCEEEEECSCHHHHTTSSEEEEE-ETTE
T ss_pred HHHHcCCCEEEEeCCccc------CCHH--------HHHHHHHHHHHHHHHcCCEEEEEcCCHHHHHhCCEEEEE-ECCE
Confidence 344557788888772211 0000 012456777888777677666543211111356778888 5898
Q ss_pred eeee
Q 022243 115 DLGL 118 (300)
Q Consensus 115 i~~~ 118 (300)
++..
T Consensus 223 i~~~ 226 (235)
T 3tif_A 223 VERE 226 (235)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7644
No 58
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=33.73 E-value=1.2e+02 Score=24.87 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCcc---C-CccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYF---C-QAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~---~-~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|++.|+.+=. +|+. . .....+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 150 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGALY--SYWPIDYTKTIDKKGDWERS-----VESVREVAKVAEACGVDFCL 150 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEESTT--SCSSCCTTSCCCHHHHHHHH-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeecccc--CCCCCcCCCCCCHHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 456788889999999999999974211 1221 1 11111122222 14567777888888887554
No 59
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=33.57 E-value=1.6e+02 Score=22.40 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=19.1
Q ss_pred ceEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE
Q 022243 8 EVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIIL 45 (300)
Q Consensus 8 ~~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliV 45 (300)
.+||++++.....++-.. -+...++...+.|.++-+
T Consensus 12 ~~ri~IV~arfn~~I~~~--Ll~gA~~~l~~~G~~i~v 47 (157)
T 2i0f_A 12 APHLLIVEARFYDDLADA--LLDGAKAALDEAGATYDV 47 (157)
T ss_dssp CCEEEEEEECSSHHHHHH--HHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEEEEeCcHHHHHH--HHHHHHHHHHHcCCCeEE
Confidence 489999999874433222 222233333445555543
No 60
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=32.90 E-value=1.6e+02 Score=22.23 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=13.0
Q ss_pred EEEEEcCCCCeeeeee
Q 022243 105 SIAIIDADGSDLGLYR 120 (300)
Q Consensus 105 ~~~vi~~~G~i~~~~~ 120 (300)
+.++|+++|+++.++.
T Consensus 154 ~~~lid~~G~i~~~~~ 169 (185)
T 2gs3_A 154 TKFLIDKNGCVVKRYG 169 (185)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEeeC
Confidence 7899999999876653
No 61
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=32.67 E-value=1.2e+02 Score=22.82 Aligned_cols=25 Identities=16% Similarity=0.057 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEec
Q 022243 23 STNLATAERLVRAAHGKGANIILIQ 47 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfP 47 (300)
...+..+.++.++-.+.++.+|.+.
T Consensus 68 ~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 68 STEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 3445566666666666788887764
No 62
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=32.56 E-value=85 Score=23.45 Aligned_cols=69 Identities=7% Similarity=0.083 Sum_probs=41.2
Q ss_pred EEEEEeCCC-----CCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHH
Q 022243 10 VVSALQFAC-----TDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (300)
Q Consensus 10 ~Ia~~Q~~~-----~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (300)
.+.+++... ..+.+...+.+.++++.+.+.++.++++-= .++... ..... ..+-+.++++|+
T Consensus 68 d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~-~~p~~~----~~~~~--------~~~~~~~~~~a~ 134 (185)
T 3hp4_A 68 THVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEI-YIPPNY----GPRYS--------KMFTSSFTQISE 134 (185)
T ss_dssp SEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECC-CCCSTT----CHHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeC-CCCCcc----cHHHH--------HHHHHHHHHHHH
Confidence 455555543 134667777788888888778899877621 111110 01111 255678889999
Q ss_pred HcCcEEe
Q 022243 85 ELGVVMP 91 (300)
Q Consensus 85 ~~~v~iv 91 (300)
++++.++
T Consensus 135 ~~~~~~v 141 (185)
T 3hp4_A 135 DTNAHLM 141 (185)
T ss_dssp HHCCEEE
T ss_pred HcCCEEE
Confidence 9988765
No 63
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=32.35 E-value=79 Score=25.52 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=36.7
Q ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCc
Q 022243 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGV 88 (300)
Q Consensus 9 ~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v 88 (300)
++|..+...... ..+.+.+.++.|+.-|++.|+++ +| .+.++.+.+.|+++|+
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~----~~-------------------~~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCE----PA-------------------LSDWDLVEKLSKQYNI 129 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEEC----CC-------------------GGGHHHHHHHHHHHTC
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEec----CC-------------------HHHHHHHHHHHHHhCC
Confidence 455555444321 23456778888888888888876 22 1334678888999998
Q ss_pred EEee
Q 022243 89 VMPV 92 (300)
Q Consensus 89 ~iv~ 92 (300)
.+.+
T Consensus 130 ~l~~ 133 (262)
T 3p6l_A 130 KISV 133 (262)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 64
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=32.33 E-value=89 Score=24.08 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=25.1
Q ss_pred cceEEEEEeCCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEeccc
Q 022243 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQEL 49 (300)
Q Consensus 7 ~~~~Ia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~ 49 (300)
.+|||...-.+- ..+....++.+.++|+ +.++|+|+|-|.
T Consensus 2 ~~l~v~t~Ni~g~~~~~~~~r~~~i~~~i~---~~~pDIi~LQEv 43 (250)
T 4f1h_A 2 SKLSIISWNVDGLDTLNLADRARGLCSYLA---LYTPDVVFLQEL 43 (250)
T ss_dssp CCEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEeC
Confidence 357776655442 2344555555666665 348999999994
No 65
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=32.06 E-value=1.6e+02 Score=22.24 Aligned_cols=15 Identities=27% Similarity=0.485 Sum_probs=11.2
Q ss_pred EEEEEcCCCCeeeee
Q 022243 105 SIAIIDADGSDLGLY 119 (300)
Q Consensus 105 ~~~vi~~~G~i~~~~ 119 (300)
+.++|+++|+++.++
T Consensus 153 ~~~lid~~G~i~~~~ 167 (190)
T 2vup_A 153 TSFLIDRDGVPVERF 167 (190)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEECCCCcEEEEE
Confidence 678888888876543
No 66
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=31.84 E-value=73 Score=26.83 Aligned_cols=65 Identities=14% Similarity=0.030 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCC-----ccCC--ccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGY-----YFCQ--AQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g-----~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
+..++.+.+.++.|+.-|++.|+++=....+ +... ....+..+.. .+.+..+.+.|+++|+.+.+
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~l~l 178 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDF-----ADRWNPILDVFDAEGVRFAH 178 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHH-----HHHHHHHHHHHHHcCCEEEE
Confidence 4567788899999999999988874111110 0000 0001111111 14566777888888887554
No 67
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=31.26 E-value=66 Score=28.05 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCeEEEe----ccccCCCcc--CC-----ccchHHHhhcCCCCCChhHHHHHHHHHHcCcE
Q 022243 21 DVSTNLATAERLVRAAHGKGANIILI----QELFEGYYF--CQ-----AQREDFFQRAKPYKDHPTILKMQELAKELGVV 89 (300)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~dliVf----PE~~~~g~~--~~-----~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~ 89 (300)
|-..+++++.++++.|++.|||.|=| |+..++.+. .. ....+.++... ...+++..|.+.|++.|+.
T Consensus 29 NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~--l~~e~~~~L~~~~~~~Gi~ 106 (349)
T 2wqp_A 29 NHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCA--LNEEDEIKLKEYVESKGMI 106 (349)
T ss_dssp TTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHC--CCHHHHHHHHHHHHHTTCE
T ss_pred cccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhC--CCHHHHHHHHHHHHHhCCe
Confidence 34567788899999999999999887 444333332 11 00012222222 2357889999999999999
Q ss_pred Eeeeee
Q 022243 90 MPVSFF 95 (300)
Q Consensus 90 iv~g~~ 95 (300)
++..-.
T Consensus 107 ~~st~~ 112 (349)
T 2wqp_A 107 FISTLF 112 (349)
T ss_dssp EEEEEC
T ss_pred EEEeeC
Confidence 886643
No 68
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=30.08 E-value=1.2e+02 Score=23.11 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=36.4
Q ss_pred cceEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCC-eEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHH
Q 022243 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGA-NIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKE 85 (300)
Q Consensus 7 ~~~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~-dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 85 (300)
..+||++++.....++-.. -+...++.....|+ ++-++ ..||-+ +.--..++++++
T Consensus 16 ~~~ri~IV~arfn~~I~~~--Ll~gA~~~l~~~G~~~i~v~---~VPGaf------------------EiP~aak~la~~ 72 (160)
T 2c92_A 16 SGVRLAIVASSWHGKICDA--LLDGARKVAAGCGLDDPTVV---RVLGAI------------------EIPVVAQELARN 72 (160)
T ss_dssp TTCCEEEEEECSSHHHHHH--HHHHHHHHHHHTTCSCCEEE---EESSGG------------------GHHHHHHHHHTS
T ss_pred CCCEEEEEEEeCcHHHHHH--HHHHHHHHHHHcCCCceEEE---ECCcHH------------------HHHHHHHHHHhc
Confidence 3489999999874433222 22223333444555 22222 234421 111234667777
Q ss_pred cCcEEeeeeeec
Q 022243 86 LGVVMPVSFFEE 97 (300)
Q Consensus 86 ~~v~iv~g~~~~ 97 (300)
|+..|.+|...+
T Consensus 73 yDavIaLG~VIr 84 (160)
T 2c92_A 73 HDAVVALGVVIR 84 (160)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCEEEEEeeeec
Confidence 999998997654
No 69
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=29.85 E-value=48 Score=28.97 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCe-----EEEec----cccCCCccCC-cc--chHHHhhcCCCCCChhHHHHHHHHHHcCc
Q 022243 21 DVSTNLATAERLVRAAHGKGAN-----IILIQ----ELFEGYYFCQ-AQ--REDFFQRAKPYKDHPTILKMQELAKELGV 88 (300)
Q Consensus 21 ~~~~n~~~~~~~i~~A~~~~~d-----liVfP----E~~~~g~~~~-~~--~~~~~~~~~~~~~~~~~~~l~~~a~~~~v 88 (300)
|-...++...++|+.|++.|+| -|=|. |...+..... .. ..+..+.++ ...+++..|.+.|++.|+
T Consensus 15 NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~e--l~~e~~~~L~~~~~~~Gi 92 (350)
T 3g8r_A 15 NHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETR--LQPEQMQKLVAEMKANGF 92 (350)
T ss_dssp TTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTC--CCHHHHHHHHHHHHHTTC
T ss_pred CccCcHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhc--CCHHHHHHHHHHHHHcCC
Confidence 3344456677777777766765 66663 3322211100 00 011122111 235788999999999999
Q ss_pred EEeeeee
Q 022243 89 VMPVSFF 95 (300)
Q Consensus 89 ~iv~g~~ 95 (300)
.++..-.
T Consensus 93 ~~~st~f 99 (350)
T 3g8r_A 93 KAICTPF 99 (350)
T ss_dssp EEEEEEC
T ss_pred cEEeccC
Confidence 9886643
No 70
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=29.54 E-value=78 Score=26.50 Aligned_cols=64 Identities=13% Similarity=0.070 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCC-CccCCc-cchHHHhhcCCCCCChhHHHHHHHHHHcCcE-Ee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEG-YYFCQA-QREDFFQRAKPYKDHPTILKMQELAKELGVV-MP 91 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~-iv 91 (300)
+..++.+.+.++.|+.-|+..|+.|=.+.+ +..... ...+..+.. .+.+..+.+.|+++|+. +.
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIA-----RDMWIELAAYAKRQGLSMLY 176 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHH-----HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHH-----HHHHHHHHHHHHhcCCeEEE
Confidence 456678899999999999999997643321 100110 011111111 14567777888888887 54
No 71
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=29.43 E-value=43 Score=25.29 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=25.1
Q ss_pred HHHHHHHHHcCcEEeeeeeeccCC-ceeeEEEEEcCCCCeeeeeee
Q 022243 77 LKMQELAKELGVVMPVSFFEEANN-AHYNSIAIIDADGSDLGLYRK 121 (300)
Q Consensus 77 ~~l~~~a~~~~v~iv~g~~~~~~~-~~yN~~~vi~~~G~i~~~~~K 121 (300)
+.+.++++.+++.+... ..+ ....+.++||++|+++..|..
T Consensus 104 ~~~~~~~~~~g~~~~~~----~~~~~~~~~~~lID~~G~i~~~~~g 145 (170)
T 3me7_A 104 EDLFKLLDAIDFRFMTA----GNDFIHPNVVVVLSPELQIKDYIYG 145 (170)
T ss_dssp HHHHHHHHHTTCCCEEE----TTEEECCCEEEEECTTSBEEEEEES
T ss_pred HHHHHHHHHCCeEEecC----CCccccCceEEEECCCCeEEEEEeC
Confidence 45677777776654321 111 123368999999999876643
No 72
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=28.19 E-value=58 Score=30.92 Aligned_cols=70 Identities=10% Similarity=0.052 Sum_probs=39.5
Q ss_pred HHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee-ecc-CCceeeEEEEEcC
Q 022243 34 RAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF-EEA-NNAHYNSIAIIDA 111 (300)
Q Consensus 34 ~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~-~~~-~~~~yN~~~vi~~ 111 (300)
+.....|||+|+.|=.+- +.... ...+...++..|.+++++++.... -.+ ++..|....+|.|
T Consensus 176 r~la~~GAdii~~psas~--~~~gk-------------~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~p 240 (634)
T 3ilv_A 176 IRHYEKGATLVLNPSASH--FAFGK-------------SAIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIAH 240 (634)
T ss_dssp --CGGGTCSEEEEEECCB--CCTTH-------------HHHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEEE
T ss_pred HHHHHCCCcEEEEecCCc--cccCc-------------HHHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEEc
Confidence 334556999999996431 11100 013445667788899999885432 222 2334443334449
Q ss_pred CCCeeee
Q 022243 112 DGSDLGL 118 (300)
Q Consensus 112 ~G~i~~~ 118 (300)
+|+++..
T Consensus 241 ~G~vla~ 247 (634)
T 3ilv_A 241 KGKLIQR 247 (634)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 9998764
No 73
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=28.01 E-value=1.8e+02 Score=21.77 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=12.4
Q ss_pred EEEEEcCCCCeeeeee
Q 022243 105 SIAIIDADGSDLGLYR 120 (300)
Q Consensus 105 ~~~vi~~~G~i~~~~~ 120 (300)
+.++||++|+++.++.
T Consensus 152 ~~~lid~~G~i~~~~~ 167 (183)
T 2obi_A 152 TKFLIDKNGCVVKRYG 167 (183)
T ss_dssp CEEEECTTSCEEEEEC
T ss_pred eEEEECCCCCEEEEeC
Confidence 6789999999876543
No 74
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b}
Probab=27.82 E-value=1.1e+02 Score=24.43 Aligned_cols=41 Identities=12% Similarity=0.230 Sum_probs=26.4
Q ss_pred cceEEEEEeCCC--CCCHHHHHHHHHHHHHHHHhCCCeEEEecccc
Q 022243 7 REVVVSALQFAC--TDDVSTNLATAERLVRAAHGKGANIILIQELF 50 (300)
Q Consensus 7 ~~~~Ia~~Q~~~--~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~ 50 (300)
++|||+..-..- ..+....++++.+.|+ +.++|+|+|-|..
T Consensus 2 ~~l~v~t~Ni~~~~~~~~~~~~~~i~~~i~---~~~~DIi~LQEv~ 44 (266)
T 3teb_A 2 NAMKILTVNVHAWLEENQMEKIDILARTIA---EKQYDVIAMQEVN 44 (266)
T ss_dssp -CEEEEEEECCTTCSTTHHHHHHHHHHHHH---HHTCSEEEEEEEE
T ss_pred CceEEEEEecccccCcchhHHHHHHHHHHH---hcCCCEEEEEEcc
Confidence 457777655543 2345556666666665 3489999999974
No 75
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=27.42 E-value=94 Score=25.01 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 25 NLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 25 n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
..+.+.+.++.|+.-|+..|+++ ++ .+.++.+.+.|+++|+.+.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~~~----p~-------------------~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIVGV----PN-------------------YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE----EC-------------------GGGHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEec----CC-------------------HHHHHHHHHHHHHcCCEEEE
Confidence 34566677777777777777663 11 14457788888888887653
No 76
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=27.28 E-value=51 Score=24.77 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=10.7
Q ss_pred EEEEEcCCCCeeee
Q 022243 105 SIAIIDADGSDLGL 118 (300)
Q Consensus 105 ~~~vi~~~G~i~~~ 118 (300)
+.++||++|+|...
T Consensus 123 ~tflID~~G~I~~~ 136 (164)
T 4gqc_A 123 AVFIVKPDGTVAYK 136 (164)
T ss_dssp EEEEECTTSBEEEE
T ss_pred EEEEECCCCEEEEE
Confidence 56889999987544
No 77
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=26.84 E-value=1.1e+02 Score=25.66 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEE
Q 022243 20 DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVM 90 (300)
Q Consensus 20 ~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~i 90 (300)
.+.+++++.+.+.++.|++.+..+.+.||.+.- .+.+++..+.+.+.+.|+..
T Consensus 114 ~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~------------------~~~~~~~~~~~~~~~~G~~~ 166 (293)
T 3ewb_X 114 MSRAEVLASIKHHISYARQKFDVVQFSPEDATR------------------SDRAFLIEAVQTAIDAGATV 166 (293)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGG------------------SCHHHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCC------------------CCHHHHHHHHHHHHHcCCCE
Confidence 567899999999999999999998888874210 01245555666666776653
No 78
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=26.16 E-value=2.1e+02 Score=21.46 Aligned_cols=75 Identities=9% Similarity=-0.011 Sum_probs=44.0
Q ss_pred eEEEEEeCCC-C-------CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCC--ccCCccchHHHhhcCCCCCChhHHH
Q 022243 9 VVVSALQFAC-T-------DDVSTNLATAERLVRAAHGKGANIILIQELFEGY--YFCQAQREDFFQRAKPYKDHPTILK 78 (300)
Q Consensus 9 ~~Ia~~Q~~~-~-------~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (300)
-.+.++++.. . .+.+...+.+.++++.+.+.++.+++.--..... +.+.... .... ..+-+.
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~---~~~~-----~~~n~~ 146 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQP---ADKV-----IQLNKW 146 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCC---HHHH-----HHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccH---HHHH-----HHHHHH
Confidence 4566666654 1 2567777788888888877899988873222211 1100000 0000 245577
Q ss_pred HHHHHHHcCcEEe
Q 022243 79 MQELAKELGVVMP 91 (300)
Q Consensus 79 l~~~a~~~~v~iv 91 (300)
++++|+++++.++
T Consensus 147 l~~~a~~~~v~~i 159 (204)
T 3p94_A 147 IKEYADKNGLTYV 159 (204)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCcEE
Confidence 8889999888765
No 79
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=25.72 E-value=62 Score=25.80 Aligned_cols=39 Identities=23% Similarity=0.077 Sum_probs=23.0
Q ss_pred eEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccC
Q 022243 9 VVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (300)
Q Consensus 9 ~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~ 51 (300)
+.+-++|.|+.+... ..+++.+.+ .+.++|+|++-|.-.
T Consensus 18 ~~lri~s~Nv~~~~~-~~~~l~~~i---~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 18 PPYRVLQANLQRKKL-ATAELAIEA---ATRKAAIALIQEPYV 56 (245)
T ss_dssp CCEEEEEEECTTCHH-HHHHHHHHH---HHHTCSEEEEESCCC
T ss_pred cceeeeeeeccccHH-HHHHHHHHH---hhcCCCEEEEEcccc
Confidence 345566677743322 233444444 455899999999643
No 80
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=25.48 E-value=2e+02 Score=25.10 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEeccccCCCccC--CccchHHHhhcCCCCCChhHHHHHHHHHHcC--cEEee
Q 022243 23 STNLATAERLVRAAHGKGANIILIQELFEGYYFC--QAQREDFFQRAKPYKDHPTILKMQELAKELG--VVMPV 92 (300)
Q Consensus 23 ~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~--v~iv~ 92 (300)
+..++.+.+.++.|++-|++.|++.=. ..|+.. .....+..+.. .+.+..+.+.|+++| +.+.+
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G-~~g~~~~~~~~~~~~~~~~-----~e~L~~l~~~A~~~G~~v~l~l 179 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGG-REGSEYDGSKDLAAALDRM-----REGVDTAAGYIKDKGYNLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCT-TCEESSGGGCCHHHHHHHH-----HHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCC-CCccccccccCHHHHHHHH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 567788999999999999998876211 111100 00111112211 145677777888888 77654
No 81
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=25.45 E-value=1e+02 Score=23.17 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=41.4
Q ss_pred EEEEEeCCC-C----CCHHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHH
Q 022243 10 VVSALQFAC-T----DDVSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAK 84 (300)
Q Consensus 10 ~Ia~~Q~~~-~----~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 84 (300)
.+.+++... . .+.+...+.+.++++.+.+.++.+++.--. .+.. . ..... ..+-+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~~-~---~~~~~--------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPAN-Y---GRRYN--------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCGG-G---CHHHH--------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCcc-h---hHHHH--------HHHHHHHHHHHH
Confidence 456666655 1 256777777888888777778998876211 1110 0 01111 245577889999
Q ss_pred HcCcEEe
Q 022243 85 ELGVVMP 91 (300)
Q Consensus 85 ~~~v~iv 91 (300)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9887655
No 82
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=24.69 E-value=2.9e+02 Score=23.55 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeccccCCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEee
Q 022243 22 VSTNLATAERLVRAAHGKGANIILIQELFEGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 22 ~~~n~~~~~~~i~~A~~~~~dliVfPE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~ 92 (300)
...|++.+.++++.-.++|..+.=++=--+|.+........+.+.+ .+.+..+.++|+++++-+.+
T Consensus 55 ~~~Nl~~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~~~~-----~~~l~~iG~~a~~~~iRLS~ 120 (310)
T 3tc3_A 55 SSSNLLCLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWKDKL-----SHILGDIGDFIKENSIRISM 120 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHHHHT-----HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEeCcccCCCccccccccchHHHH-----HHHHHHHHHHHHHcCcEEEe
Confidence 3788999999999999999988876654444433222222222222 25678899999999987653
No 83
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A
Probab=23.88 E-value=89 Score=24.32 Aligned_cols=41 Identities=10% Similarity=0.175 Sum_probs=22.7
Q ss_pred cceEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEeccccC
Q 022243 7 REVVVSALQFACTDDVSTNLATAERLVRAAHGKGANIILIQELFE 51 (300)
Q Consensus 7 ~~~~Ia~~Q~~~~~~~~~n~~~~~~~i~~A~~~~~dliVfPE~~~ 51 (300)
++|||..+-.+-... ....+.+.+.++ +.++|+|++-|.-.
T Consensus 6 ~~lri~t~Nv~g~~~-~~~~~~~~~~i~---~~~~DIv~LQE~~~ 46 (238)
T 1vyb_A 6 SHITILTLNINGLNS-AIKRHRLASWIK---SQDPSVCCIQETHL 46 (238)
T ss_dssp CCEEEEEEECSCCCS-HHHHHHHHHHHH---HHCCSEEEEECCCC
T ss_pred CcceEEEEecccCCc-hhhHHHHHHHHH---HcCCCEEEEecccC
Confidence 346665544432222 222244555554 45899999999743
No 84
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=23.85 E-value=1.4e+02 Score=23.71 Aligned_cols=23 Identities=9% Similarity=0.062 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEec
Q 022243 25 NLATAERLVRAAHGKGANIILIQ 47 (300)
Q Consensus 25 n~~~~~~~i~~A~~~~~dliVfP 47 (300)
.+..+.++.++-.+.++.+|-+|
T Consensus 73 e~p~L~~l~~~~~~~g~~Vlgvs 95 (215)
T 2i3y_A 73 QYPELNALQEELKPYGLVVLGFP 95 (215)
T ss_dssp GHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hHHHHHHHHHHhccCCeEEEEEE
Confidence 35566666666666688888887
No 85
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=23.70 E-value=94 Score=25.02 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=22.7
Q ss_pred HHHHHHcCcEEeeeeeeccCCceeeEEEEEcCCCCeee
Q 022243 80 QELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDLG 117 (300)
Q Consensus 80 ~~~a~~~~v~iv~g~~~~~~~~~yN~~~vi~~~G~i~~ 117 (300)
.++++.||++. ...+..+-+.++||++|.|..
T Consensus 130 ~~va~~yGv~~------~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 130 KNIARSYGVLE------ESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp SHHHHHTTCEE------TTTTEECEEEEEECTTSBEEE
T ss_pred cHHHHHcCCcc------cCCCeeEEEEEEECCCCeEEE
Confidence 56788888763 223455678899999998754
No 86
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=23.66 E-value=2e+02 Score=25.27 Aligned_cols=59 Identities=12% Similarity=0.109 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEecccc--CCCccCCccchHHHhhcCCCCCChhHHHHHHHHHHcCcEEeeeee
Q 022243 25 NLATAERLVRAAHGKGANIILIQELF--EGYYFCQAQREDFFQRAKPYKDHPTILKMQELAKELGVVMPVSFF 95 (300)
Q Consensus 25 n~~~~~~~i~~A~~~~~dliVfPE~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~v~iv~g~~ 95 (300)
..+...++++.+++.|+|+|.|-=+- .+.|... ....+.+..|.+.+++.|+.++.-..
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~------------gl~~egl~~L~~~~~~~Gl~~~te~~ 214 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQ------------GLGLEGLKILKRVSDEYGLGVISEIV 214 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCC------------CCTHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhc------------CCCHHHHHHHHHHHHHcCCEEEEecC
Confidence 56677888888888999999875431 0111110 01236778999999999999887644
No 87
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=22.84 E-value=2.8e+02 Score=21.79 Aligned_cols=19 Identities=16% Similarity=-0.025 Sum_probs=16.3
Q ss_pred ChhHHHHHHHHHHcCcEEe
Q 022243 73 HPTILKMQELAKELGVVMP 91 (300)
Q Consensus 73 ~~~~~~l~~~a~~~~v~iv 91 (300)
..+.+.++++|+++++.++
T Consensus 149 ~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 149 TRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp CHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCeEE
Confidence 4677899999999998876
No 88
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=22.52 E-value=70 Score=23.49 Aligned_cols=17 Identities=12% Similarity=0.268 Sum_probs=14.0
Q ss_pred eeEEEEEcCCCCeeeee
Q 022243 103 YNSIAIIDADGSDLGLY 119 (300)
Q Consensus 103 yN~~~vi~~~G~i~~~~ 119 (300)
.-+.++||++|+++..+
T Consensus 125 ~p~~~lid~~G~i~~~~ 141 (163)
T 3gkn_A 125 ERSTFLLSPEGQVVQAW 141 (163)
T ss_dssp CCEEEEECTTSCEEEEE
T ss_pred ceEEEEECCCCeEEEEE
Confidence 55789999999987766
No 89
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=22.46 E-value=2.4e+02 Score=20.98 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=11.6
Q ss_pred EEEEEcCCCCeeeee
Q 022243 105 SIAIIDADGSDLGLY 119 (300)
Q Consensus 105 ~~~vi~~~G~i~~~~ 119 (300)
+.++|+++|+++.++
T Consensus 149 ~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 149 WKYLVAPDGKVVGAW 163 (181)
T ss_dssp CEEEECTTSCEEEEE
T ss_pred eEEEEcCCCCEEEEe
Confidence 678888899887554
No 90
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=21.65 E-value=2e+02 Score=22.76 Aligned_cols=41 Identities=10% Similarity=0.084 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHcCcEEeeeeeeccCCceeeEEEEEcCCCCee
Q 022243 74 PTILKMQELAKELGVVMPVSFFEEANNAHYNSIAIIDADGSDL 116 (300)
Q Consensus 74 ~~~~~l~~~a~~~~v~iv~g~~~~~~~~~yN~~~vi~~~G~i~ 116 (300)
...+.|.+++++ +..|++-+-....-.+.+..+++ .+|+++
T Consensus 178 ~~~~~l~~l~~~-g~tvi~vtHd~~~~~~~d~v~~l-~~G~i~ 218 (224)
T 2pcj_A 178 RVMDIFLKINEG-GTSIVMVTHERELAELTHRTLEM-KDGKVV 218 (224)
T ss_dssp HHHHHHHHHHHT-TCEEEEECSCHHHHTTSSEEEEE-ETTEEE
T ss_pred HHHHHHHHHHHC-CCEEEEEcCCHHHHHhCCEEEEE-ECCEEE
Confidence 445667777666 66665543211111356777777 578765
No 91
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=21.63 E-value=1.9e+02 Score=25.85 Aligned_cols=21 Identities=5% Similarity=0.199 Sum_probs=17.8
Q ss_pred ChhHHHHHHHHHHcCcEEeee
Q 022243 73 HPTILKMQELAKELGVVMPVS 93 (300)
Q Consensus 73 ~~~~~~l~~~a~~~~v~iv~g 93 (300)
..+++.|.++|+++++.+++=
T Consensus 243 ~~~l~~l~~l~~~~gillI~D 263 (472)
T 3hmu_A 243 DSYWPEIQRICDKYDILLIAD 263 (472)
T ss_dssp TTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEE
Confidence 478999999999999987753
No 92
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=21.13 E-value=2.5e+02 Score=22.47 Aligned_cols=60 Identities=10% Similarity=0.056 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCCeEEEeccccCCC---ccCCccchHHHhhcCCCCCChhHHHHHHHHHHc-CcEEeeeee
Q 022243 28 TAERLVRAAHGKGANIILIQELFEGY---YFCQAQREDFFQRAKPYKDHPTILKMQELAKEL-GVVMPVSFF 95 (300)
Q Consensus 28 ~~~~~i~~A~~~~~dliVfPE~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~-~v~iv~g~~ 95 (300)
.+.++++.|.+.|.+.|++=+..... +....... +.. ..+++.+.++.+++ ++.|+.|.-
T Consensus 17 ~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~---~~~-----~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 17 HPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRL---EAL-----PFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCG---GGH-----HHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccH---HHH-----HHHHHHHHHHHHHhcCCcEEEEEE
Confidence 34578899999999999888876543 11000000 000 13456667777776 888888863
No 93
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=21.01 E-value=2.6e+02 Score=20.79 Aligned_cols=15 Identities=13% Similarity=0.494 Sum_probs=12.0
Q ss_pred EEEEcCCCCeeeeee
Q 022243 106 IAIIDADGSDLGLYR 120 (300)
Q Consensus 106 ~~vi~~~G~i~~~~~ 120 (300)
.++|+++|+++.++.
T Consensus 139 ~~lid~~G~i~~~~~ 153 (180)
T 3kij_A 139 KYLVNPEGQVVKFWR 153 (180)
T ss_dssp EEEECTTSCEEEEEC
T ss_pred EEEECCCCCEEEEEC
Confidence 789999999876543
No 94
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=20.09 E-value=1.8e+02 Score=25.32 Aligned_cols=20 Identities=10% Similarity=0.218 Sum_probs=17.2
Q ss_pred ChhHHHHHHHHHHcCcEEee
Q 022243 73 HPTILKMQELAKELGVVMPV 92 (300)
Q Consensus 73 ~~~~~~l~~~a~~~~v~iv~ 92 (300)
.++++.|.++|+++++.++.
T Consensus 220 ~~~l~~l~~l~~~~~~~li~ 239 (429)
T 3k28_A 220 PGFLEGLREVTEQNGALLIF 239 (429)
T ss_dssp TTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 47789999999999998774
No 95
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=20.06 E-value=73 Score=27.63 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=22.5
Q ss_pred eEEEEEeCCCC----CCHHHHHHHHHHHHHHHHhCCCeEEEeccc
Q 022243 9 VVVSALQFACT----DDVSTNLATAERLVRAAHGKGANIILIQEL 49 (300)
Q Consensus 9 ~~Ia~~Q~~~~----~~~~~n~~~~~~~i~~A~~~~~dliVfPE~ 49 (300)
.++-++-.|+. .+.....+.+.++|+ +.++|+|+|-|.
T Consensus 118 ~~lkVlSWNI~Gl~~~~~~~R~~~I~~~I~---~~~PDIV~LQEv 159 (362)
T 4gew_A 118 FEVSVMSWNIDGLDGRSLLTRMKAVAHIVK---NVNPDILFLQEV 159 (362)
T ss_dssp CEEEEEEEECCTTCCTTHHHHHHHHHHHHH---HHCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHHH---HcCCCEEEEEcC
Confidence 34444445552 234444445555554 458999999995
Done!