Query 022248
Match_columns 300
No_of_seqs 255 out of 3287
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:21:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.9 2.7E-25 9.1E-30 188.1 21.8 186 96-285 42-248 (261)
2 3dlc_A Putative S-adenosyl-L-m 99.9 1.7E-23 5.9E-28 172.2 19.0 168 113-283 31-204 (219)
3 1vl5_A Unknown conserved prote 99.9 3.2E-23 1.1E-27 175.6 19.4 157 124-284 36-192 (260)
4 3bus_A REBM, methyltransferase 99.9 1.2E-23 4E-28 179.5 16.2 169 111-283 46-217 (273)
5 4htf_A S-adenosylmethionine-de 99.9 7.5E-23 2.6E-27 175.7 17.6 170 113-285 56-235 (285)
6 1xxl_A YCGJ protein; structura 99.9 2.3E-22 7.7E-27 168.3 19.2 157 124-284 20-176 (239)
7 3kkz_A Uncharacterized protein 99.9 1.1E-22 3.6E-27 173.1 16.1 158 116-283 35-197 (267)
8 2o57_A Putative sarcosine dime 99.9 2.9E-22 9.8E-27 173.0 18.9 164 111-282 63-234 (297)
9 3dtn_A Putative methyltransfer 99.9 2.6E-22 8.8E-27 167.3 17.8 158 124-286 43-218 (234)
10 3hnr_A Probable methyltransfer 99.9 1.2E-22 4E-27 167.7 14.2 151 124-282 44-201 (220)
11 3mgg_A Methyltransferase; NYSG 99.9 5E-22 1.7E-26 169.7 18.2 158 124-284 36-200 (276)
12 3f4k_A Putative methyltransfer 99.9 5.7E-22 1.9E-26 167.5 18.0 150 124-283 45-197 (257)
13 1nkv_A Hypothetical protein YJ 99.9 2.2E-22 7.4E-27 169.9 15.4 152 124-281 35-186 (256)
14 3l8d_A Methyltransferase; stru 99.9 1.3E-22 4.5E-27 169.8 13.9 155 121-285 49-203 (242)
15 3hem_A Cyclopropane-fatty-acyl 99.9 7E-22 2.4E-26 171.0 17.9 166 111-285 57-246 (302)
16 3dh0_A SAM dependent methyltra 99.9 9.5E-22 3.3E-26 162.1 17.4 144 124-282 36-181 (219)
17 3vc1_A Geranyl diphosphate 2-C 99.9 7E-22 2.4E-26 171.9 16.8 162 116-283 106-270 (312)
18 2aot_A HMT, histamine N-methyl 99.9 9.7E-22 3.3E-26 169.4 17.4 154 124-279 51-218 (292)
19 1kpg_A CFA synthase;, cyclopro 99.9 9.6E-22 3.3E-26 168.9 16.6 168 112-283 50-229 (287)
20 4fsd_A Arsenic methyltransfera 99.9 1.3E-21 4.6E-26 174.7 17.3 155 124-281 82-250 (383)
21 3ujc_A Phosphoethanolamine N-m 99.9 4.8E-22 1.6E-26 168.6 13.6 161 115-283 44-207 (266)
22 3h2b_A SAM-dependent methyltra 99.9 5.5E-22 1.9E-26 161.7 13.4 142 125-284 41-184 (203)
23 3ou2_A SAM-dependent methyltra 99.9 1.7E-21 5.8E-26 160.3 16.4 150 124-282 45-205 (218)
24 2p7i_A Hypothetical protein; p 99.9 1.6E-21 5.4E-26 163.6 16.2 152 125-284 42-201 (250)
25 2ex4_A Adrenal gland protein A 99.9 1.5E-21 5.3E-26 163.4 16.0 146 125-283 79-226 (241)
26 1vlm_A SAM-dependent methyltra 99.9 1.2E-20 4.2E-25 155.6 20.8 145 125-285 47-191 (219)
27 3ocj_A Putative exported prote 99.9 2.8E-21 9.5E-26 167.5 17.3 160 121-282 114-291 (305)
28 3gu3_A Methyltransferase; alph 99.9 6.6E-21 2.3E-25 163.5 18.8 154 124-281 21-189 (284)
29 3sm3_A SAM-dependent methyltra 99.9 3.7E-21 1.3E-25 160.0 15.7 160 124-284 29-209 (235)
30 3e23_A Uncharacterized protein 99.9 2.1E-21 7.3E-26 159.2 13.5 149 114-284 33-184 (211)
31 2a14_A Indolethylamine N-methy 99.9 1.1E-21 3.7E-26 166.6 12.0 167 124-300 54-259 (263)
32 3ccf_A Cyclopropane-fatty-acyl 99.9 5.2E-21 1.8E-25 163.7 16.2 152 124-284 56-212 (279)
33 3lcc_A Putative methyl chlorid 99.9 2.3E-21 7.9E-26 161.7 13.3 154 115-286 56-211 (235)
34 3g5l_A Putative S-adenosylmeth 99.9 4.9E-21 1.7E-25 161.4 14.9 156 124-284 43-218 (253)
35 3dli_A Methyltransferase; PSI- 99.9 3E-21 1E-25 161.6 13.3 142 124-283 40-185 (240)
36 3ege_A Putative methyltransfer 99.9 1.4E-21 4.8E-26 165.6 10.6 149 124-285 33-181 (261)
37 1xtp_A LMAJ004091AAA; SGPP, st 99.9 8.3E-21 2.9E-25 159.9 15.3 157 113-283 80-239 (254)
38 1y8c_A S-adenosylmethionine-de 99.9 1.9E-20 6.5E-25 156.8 17.3 180 113-300 25-244 (246)
39 2yqz_A Hypothetical protein TT 99.9 2.8E-20 9.4E-25 157.5 18.2 152 124-280 38-194 (263)
40 3pfg_A N-methyltransferase; N, 99.9 2.2E-21 7.4E-26 164.6 10.6 129 94-232 20-152 (263)
41 2fk8_A Methoxy mycolic acid sy 99.8 4.2E-20 1.4E-24 161.0 17.9 166 113-282 77-254 (318)
42 3bkx_A SAM-dependent methyltra 99.8 6.6E-20 2.2E-24 156.4 18.2 171 114-285 31-222 (275)
43 1ri5_A MRNA capping enzyme; me 99.8 3E-20 1E-24 160.1 16.0 158 121-282 60-250 (298)
44 2xvm_A Tellurite resistance pr 99.8 1E-19 3.5E-24 147.4 17.5 140 125-282 32-173 (199)
45 3gwz_A MMCR; methyltransferase 99.8 3.8E-19 1.3E-23 158.1 22.4 159 117-281 193-355 (369)
46 1pjz_A Thiopurine S-methyltran 99.8 6E-21 2E-25 155.7 9.8 146 124-285 21-179 (203)
47 2i62_A Nicotinamide N-methyltr 99.8 2.7E-20 9.3E-25 157.7 14.1 167 124-300 55-260 (265)
48 2gs9_A Hypothetical protein TT 99.8 5E-20 1.7E-24 150.9 14.9 144 115-273 26-171 (211)
49 2p35_A Trans-aconitate 2-methy 99.8 7.2E-20 2.4E-24 154.7 15.9 152 117-277 24-185 (259)
50 3jwh_A HEN1; methyltransferase 99.8 1E-19 3.5E-24 149.8 15.8 151 124-279 28-189 (217)
51 3cgg_A SAM-dependent methyltra 99.8 1.2E-19 4E-24 146.4 15.7 152 118-300 39-194 (195)
52 2g72_A Phenylethanolamine N-me 99.8 9E-20 3.1E-24 156.8 15.9 150 124-283 70-257 (289)
53 4hg2_A Methyltransferase type 99.8 5.3E-21 1.8E-25 161.2 7.9 104 123-236 37-140 (257)
54 3g2m_A PCZA361.24; SAM-depende 99.8 1.3E-20 4.4E-25 162.9 10.5 168 115-284 72-276 (299)
55 3e8s_A Putative SAM dependent 99.8 8E-20 2.7E-24 151.0 14.8 149 124-282 51-209 (227)
56 3jwg_A HEN1, methyltransferase 99.8 1.2E-19 4.2E-24 149.5 15.6 152 124-279 28-189 (219)
57 3thr_A Glycine N-methyltransfe 99.8 3.8E-20 1.3E-24 159.4 13.0 108 125-233 57-177 (293)
58 3cc8_A Putative methyltransfer 99.8 8.3E-20 2.8E-24 151.2 14.0 158 118-285 25-188 (230)
59 3bxo_A N,N-dimethyltransferase 99.8 1.9E-20 6.4E-25 156.3 10.1 102 124-234 39-144 (239)
60 3g5t_A Trans-aconitate 3-methy 99.8 1.4E-19 4.9E-24 156.3 15.9 149 123-275 34-197 (299)
61 3i53_A O-methyltransferase; CO 99.8 3.9E-19 1.3E-23 155.8 18.7 150 125-282 169-321 (332)
62 3orh_A Guanidinoacetate N-meth 99.8 1.4E-20 4.7E-25 157.1 8.7 149 119-281 54-209 (236)
63 3dp7_A SAM-dependent methyltra 99.8 1.8E-19 6.2E-24 159.8 16.3 157 124-283 178-343 (363)
64 3bkw_A MLL3908 protein, S-aden 99.8 2.7E-20 9.4E-25 155.7 10.4 154 124-282 42-214 (243)
65 1x19_A CRTF-related protein; m 99.8 7.7E-19 2.6E-23 155.6 20.0 162 117-283 181-349 (359)
66 2r3s_A Uncharacterized protein 99.8 3.9E-19 1.3E-23 155.9 17.7 156 124-283 164-324 (335)
67 2gb4_A Thiopurine S-methyltran 99.8 1.3E-19 4.6E-24 152.3 14.0 145 124-284 67-229 (252)
68 1wzn_A SAM-dependent methyltra 99.8 4.9E-19 1.7E-23 149.0 17.4 203 87-300 7-249 (252)
69 3g07_A 7SK snRNA methylphospha 99.8 3.5E-20 1.2E-24 159.6 10.5 155 124-282 45-269 (292)
70 3d2l_A SAM-dependent methyltra 99.8 3.3E-19 1.1E-23 149.1 16.1 168 124-300 32-242 (243)
71 3mcz_A O-methyltransferase; ad 99.8 4.5E-19 1.5E-23 156.7 17.7 160 117-279 169-336 (352)
72 1ve3_A Hypothetical protein PH 99.8 1.4E-19 4.9E-24 149.7 13.5 115 114-233 28-144 (227)
73 2kw5_A SLR1183 protein; struct 99.8 4.8E-19 1.6E-23 144.1 15.7 144 125-284 30-173 (202)
74 3i9f_A Putative type 11 methyl 99.8 1.3E-19 4.3E-24 143.4 11.8 134 124-283 16-149 (170)
75 1zx0_A Guanidinoacetate N-meth 99.8 3.8E-20 1.3E-24 154.5 8.5 107 123-232 58-171 (236)
76 2qe6_A Uncharacterized protein 99.8 2.3E-18 7.7E-23 146.7 18.7 157 113-278 63-238 (274)
77 3ggd_A SAM-dependent methyltra 99.8 4.2E-19 1.4E-23 148.8 13.2 153 124-284 55-221 (245)
78 4e2x_A TCAB9; kijanose, tetron 99.8 1E-19 3.5E-24 164.4 10.0 160 112-283 93-254 (416)
79 1qzz_A RDMB, aclacinomycin-10- 99.8 2.4E-18 8.1E-23 153.2 18.4 161 117-283 173-340 (374)
80 2ip2_A Probable phenazine-spec 99.8 1.5E-18 5E-23 152.3 16.4 149 127-282 169-322 (334)
81 4a6d_A Hydroxyindole O-methylt 99.8 6.5E-18 2.2E-22 149.1 19.6 151 124-282 178-334 (353)
82 2p8j_A S-adenosylmethionine-de 99.8 8.3E-19 2.8E-23 143.3 12.9 154 124-280 22-181 (209)
83 1tw3_A COMT, carminomycin 4-O- 99.8 3.9E-18 1.3E-22 151.1 16.9 158 118-282 175-339 (360)
84 2vdw_A Vaccinia virus capping 99.8 1.1E-19 3.8E-24 156.8 6.4 109 125-233 48-171 (302)
85 3mti_A RRNA methylase; SAM-dep 99.8 3.4E-18 1.2E-22 137.1 14.6 119 114-235 11-139 (185)
86 1p91_A Ribosomal RNA large sub 99.8 1.8E-18 6E-23 147.1 13.5 161 42-235 18-182 (269)
87 2avn_A Ubiquinone/menaquinone 99.8 3E-18 1E-22 145.0 14.8 155 116-283 45-214 (260)
88 3m70_A Tellurite resistance pr 99.8 8.2E-18 2.8E-22 144.3 17.6 157 125-300 120-285 (286)
89 3reo_A (ISO)eugenol O-methyltr 99.8 6.3E-18 2.2E-22 150.1 17.4 148 124-283 202-356 (368)
90 3lst_A CALO1 methyltransferase 99.8 2.3E-18 7.8E-23 151.9 14.3 155 117-281 175-335 (348)
91 3p9c_A Caffeic acid O-methyltr 99.8 1.1E-17 3.7E-22 148.3 18.3 148 124-283 200-354 (364)
92 3e05_A Precorrin-6Y C5,15-meth 99.8 2.2E-17 7.6E-22 134.5 18.6 126 124-280 39-165 (204)
93 1fp1_D Isoliquiritigenin 2'-O- 99.8 7.2E-18 2.5E-22 150.0 15.6 147 124-282 208-360 (372)
94 3njr_A Precorrin-6Y methylase; 99.8 4.2E-17 1.4E-21 132.9 18.4 145 124-300 54-204 (204)
95 3fpf_A Mtnas, putative unchara 99.8 1.3E-17 4.6E-22 141.4 15.5 102 124-232 121-223 (298)
96 1fp2_A Isoflavone O-methyltran 99.8 1.2E-17 4.2E-22 147.4 16.1 147 124-282 187-341 (352)
97 3grz_A L11 mtase, ribosomal pr 99.8 8.9E-18 3.1E-22 136.9 14.0 133 119-283 54-186 (205)
98 3m33_A Uncharacterized protein 99.8 2.9E-18 9.8E-23 142.1 11.0 128 115-282 38-167 (226)
99 3ofk_A Nodulation protein S; N 99.7 6E-18 2E-22 139.0 11.3 104 124-233 50-156 (216)
100 1yzh_A TRNA (guanine-N(7)-)-me 99.7 5.4E-17 1.9E-21 133.2 16.8 106 124-231 40-156 (214)
101 3bgv_A MRNA CAP guanine-N7 met 99.7 5E-17 1.7E-21 141.2 17.5 111 124-234 33-158 (313)
102 2zfu_A Nucleomethylin, cerebra 99.7 7.3E-18 2.5E-22 138.4 11.2 113 124-281 66-178 (215)
103 3p2e_A 16S rRNA methylase; met 99.7 4.2E-18 1.4E-22 140.9 9.5 153 122-283 21-186 (225)
104 1xdz_A Methyltransferase GIDB; 99.7 3.9E-17 1.3E-21 136.5 14.7 131 125-284 70-204 (240)
105 3eey_A Putative rRNA methylase 99.7 3.8E-17 1.3E-21 132.2 13.7 115 121-236 18-144 (197)
106 2fca_A TRNA (guanine-N(7)-)-me 99.7 6.7E-17 2.3E-21 132.6 15.1 106 124-231 37-153 (213)
107 2pxx_A Uncharacterized protein 99.7 4.1E-18 1.4E-22 139.6 7.7 113 118-234 35-162 (215)
108 3giw_A Protein of unknown func 99.7 6E-17 2.1E-21 135.8 14.4 162 111-278 62-243 (277)
109 3p9n_A Possible methyltransfer 99.7 1.1E-16 3.8E-21 128.7 15.3 109 124-234 43-156 (189)
110 1zg3_A Isoflavanone 4'-O-methy 99.7 7.4E-17 2.5E-21 142.7 15.0 146 125-282 193-347 (358)
111 3q87_B N6 adenine specific DNA 99.7 1.6E-16 5.6E-21 125.6 15.2 123 124-286 22-153 (170)
112 2yxd_A Probable cobalt-precorr 99.7 4E-16 1.4E-20 124.3 16.9 121 124-279 34-154 (183)
113 3evz_A Methyltransferase; NYSG 99.7 1.2E-16 4E-21 132.6 14.1 135 120-281 50-205 (230)
114 3dmg_A Probable ribosomal RNA 99.7 7.2E-17 2.5E-21 143.3 13.3 139 124-284 232-375 (381)
115 3g89_A Ribosomal RNA small sub 99.7 7.4E-17 2.5E-21 135.4 12.7 132 125-285 80-215 (249)
116 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.4E-16 4.9E-21 126.5 13.6 126 124-280 24-151 (178)
117 3uwp_A Histone-lysine N-methyl 99.7 3.3E-17 1.1E-21 144.0 10.2 130 106-236 153-293 (438)
118 3htx_A HEN1; HEN1, small RNA m 99.7 1.9E-16 6.4E-21 149.1 15.8 110 124-234 720-837 (950)
119 3mq2_A 16S rRNA methyltransfer 99.7 5.3E-17 1.8E-21 133.6 10.8 148 124-282 26-184 (218)
120 1dus_A MJ0882; hypothetical pr 99.7 2.2E-16 7.5E-21 127.0 14.1 109 124-234 51-160 (194)
121 2b3t_A Protein methyltransfera 99.7 3.5E-16 1.2E-20 133.4 16.1 140 114-282 98-263 (276)
122 4df3_A Fibrillarin-like rRNA/T 99.7 1.5E-16 5E-21 131.0 12.9 137 124-282 76-217 (233)
123 3lpm_A Putative methyltransfer 99.7 3.3E-16 1.1E-20 132.4 15.4 131 125-282 49-201 (259)
124 3dxy_A TRNA (guanine-N(7)-)-me 99.7 8E-17 2.8E-21 132.5 11.2 107 124-232 33-151 (218)
125 2nxc_A L11 mtase, ribosomal pr 99.7 3.6E-16 1.2E-20 131.7 14.8 128 122-282 117-244 (254)
126 1l3i_A Precorrin-6Y methyltran 99.7 4.1E-16 1.4E-20 125.1 14.5 122 124-276 32-154 (192)
127 2fyt_A Protein arginine N-meth 99.7 1.5E-16 5E-21 139.6 12.7 103 124-228 63-168 (340)
128 1fbn_A MJ fibrillarin homologu 99.7 5.2E-16 1.8E-20 128.8 15.0 132 124-282 73-213 (230)
129 3q7e_A Protein arginine N-meth 99.7 2.1E-16 7.2E-21 139.2 12.9 105 124-230 65-172 (349)
130 2ift_A Putative methylase HI07 99.7 1.7E-16 5.7E-21 129.0 11.2 109 125-234 53-166 (201)
131 1nt2_A Fibrillarin-like PRE-rR 99.7 1.1E-15 3.6E-20 125.1 15.5 101 124-231 56-161 (210)
132 2frn_A Hypothetical protein PH 99.7 1.2E-15 4.2E-20 130.1 15.8 132 123-279 123-254 (278)
133 1yb2_A Hypothetical protein TA 99.7 2.8E-16 9.7E-21 133.9 11.7 125 124-281 109-236 (275)
134 3u81_A Catechol O-methyltransf 99.7 9E-16 3.1E-20 126.6 13.9 118 113-234 48-173 (221)
135 3lbf_A Protein-L-isoaspartate 99.7 7.6E-16 2.6E-20 125.8 13.2 101 124-233 76-176 (210)
136 1jsx_A Glucose-inhibited divis 99.7 3E-15 1E-19 121.9 16.5 100 125-231 65-165 (207)
137 3bwc_A Spermidine synthase; SA 99.7 1.7E-15 5.8E-20 130.8 15.7 140 124-284 94-242 (304)
138 2ld4_A Anamorsin; methyltransf 99.7 1.5E-16 5.1E-21 126.5 8.3 119 124-281 11-133 (176)
139 3fzg_A 16S rRNA methylase; met 99.7 1E-16 3.5E-21 126.3 6.9 104 124-231 48-152 (200)
140 3r0q_C Probable protein argini 99.7 4.2E-16 1.4E-20 138.6 11.7 105 124-231 62-169 (376)
141 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1.3E-15 4.5E-20 128.3 14.2 126 124-281 95-223 (258)
142 2fpo_A Methylase YHHF; structu 99.7 8.2E-16 2.8E-20 125.0 11.9 106 125-233 54-162 (202)
143 2h00_A Methyltransferase 10 do 99.7 3.2E-16 1.1E-20 132.0 9.8 152 125-284 65-240 (254)
144 2ipx_A RRNA 2'-O-methyltransfe 99.7 2.8E-15 9.5E-20 124.6 15.1 137 124-282 76-217 (233)
145 3ntv_A MW1564 protein; rossman 99.7 7.4E-16 2.5E-20 128.0 11.6 114 113-232 61-177 (232)
146 3tfw_A Putative O-methyltransf 99.6 3.2E-15 1.1E-19 125.5 15.2 105 125-233 63-172 (248)
147 1g6q_1 HnRNP arginine N-methyl 99.6 5.5E-16 1.9E-20 135.4 11.0 103 125-229 38-143 (328)
148 2esr_A Methyltransferase; stru 99.6 4.6E-16 1.6E-20 123.7 9.5 109 124-234 30-141 (177)
149 3mb5_A SAM-dependent methyltra 99.6 1.9E-15 6.4E-20 127.3 13.5 127 124-282 92-222 (255)
150 4dzr_A Protein-(glutamine-N5) 99.6 1.2E-16 4.2E-21 130.6 6.1 132 124-284 29-194 (215)
151 3dr5_A Putative O-methyltransf 99.6 1.8E-15 6.3E-20 124.6 12.9 119 111-232 41-164 (221)
152 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.1E-15 3.7E-20 127.1 11.6 107 124-232 45-169 (235)
153 3lec_A NADB-rossmann superfami 99.6 3.2E-15 1.1E-19 122.6 13.5 130 121-280 17-147 (230)
154 2fhp_A Methylase, putative; al 99.6 1.3E-15 4.6E-20 121.8 11.0 108 125-234 44-157 (187)
155 2gpy_A O-methyltransferase; st 99.6 3.8E-15 1.3E-19 123.7 13.9 116 111-232 42-161 (233)
156 3c3p_A Methyltransferase; NP_9 99.6 3E-15 1E-19 122.4 12.9 103 125-232 56-161 (210)
157 2y1w_A Histone-arginine methyl 99.6 3.7E-15 1.3E-19 131.2 14.1 114 115-231 39-155 (348)
158 3iv6_A Putative Zn-dependent a 99.6 1.7E-15 5.8E-20 127.2 11.2 115 114-233 33-150 (261)
159 3id6_C Fibrillarin-like rRNA/T 99.6 1.2E-14 4.3E-19 119.8 15.4 136 124-282 75-216 (232)
160 3gnl_A Uncharacterized protein 99.6 5E-15 1.7E-19 122.4 13.0 130 121-280 17-147 (244)
161 1u2z_A Histone-lysine N-methyl 99.6 2.3E-15 8E-20 134.8 11.7 119 114-233 230-361 (433)
162 1af7_A Chemotaxis receptor met 99.6 3.6E-15 1.2E-19 126.2 12.3 105 125-229 105-250 (274)
163 3kr9_A SAM-dependent methyltra 99.6 7.1E-15 2.4E-19 120.4 13.3 129 121-280 11-141 (225)
164 3duw_A OMT, O-methyltransferas 99.6 9.8E-15 3.4E-19 120.3 14.1 105 125-233 58-169 (223)
165 3hp7_A Hemolysin, putative; st 99.6 1.9E-14 6.6E-19 122.2 16.1 147 124-284 84-234 (291)
166 2b25_A Hypothetical protein; s 99.6 1.3E-15 4.6E-20 133.5 9.3 154 124-282 104-281 (336)
167 3bzb_A Uncharacterized protein 99.6 2.4E-14 8.1E-19 122.3 16.7 137 124-280 78-235 (281)
168 4dcm_A Ribosomal RNA large sub 99.6 2.3E-15 7.9E-20 133.5 10.5 114 119-233 215-336 (375)
169 1o54_A SAM-dependent O-methylt 99.6 9.9E-15 3.4E-19 124.5 13.4 127 124-282 111-239 (277)
170 2pjd_A Ribosomal RNA small sub 99.6 1.5E-15 5.3E-20 133.4 8.5 106 124-234 195-306 (343)
171 2yxe_A Protein-L-isoaspartate 99.6 9.3E-15 3.2E-19 119.8 12.6 102 124-233 76-179 (215)
172 3tr6_A O-methyltransferase; ce 99.6 1E-14 3.4E-19 120.4 12.7 150 78-233 16-176 (225)
173 3gdh_A Trimethylguanosine synt 99.6 3E-16 1E-20 131.1 3.5 102 125-229 78-179 (241)
174 1ej0_A FTSJ; methyltransferase 99.6 6.1E-15 2.1E-19 116.6 10.6 98 124-234 21-139 (180)
175 4hc4_A Protein arginine N-meth 99.6 1.2E-14 4E-19 128.1 13.3 103 124-229 82-187 (376)
176 1dl5_A Protein-L-isoaspartate 99.6 1.5E-14 5.1E-19 125.7 13.6 102 124-233 74-177 (317)
177 4azs_A Methyltransferase WBDD; 99.6 4E-15 1.4E-19 139.1 10.6 110 124-236 65-178 (569)
178 1vbf_A 231AA long hypothetical 99.6 1E-14 3.5E-19 120.9 11.9 100 124-234 69-168 (231)
179 3sso_A Methyltransferase; macr 99.6 4.6E-15 1.6E-19 130.2 9.8 104 118-233 209-326 (419)
180 2ozv_A Hypothetical protein AT 99.6 2.3E-14 7.9E-19 121.0 13.1 107 124-231 35-170 (260)
181 1ixk_A Methyltransferase; open 99.6 2.3E-14 8E-19 124.3 13.3 109 124-234 117-249 (315)
182 1ws6_A Methyltransferase; stru 99.6 7E-15 2.4E-19 115.8 9.1 104 125-234 41-150 (171)
183 3adn_A Spermidine synthase; am 99.6 1.2E-13 4.1E-18 118.3 17.5 109 124-232 82-199 (294)
184 3opn_A Putative hemolysin; str 99.6 1E-14 3.5E-19 120.9 10.4 146 124-285 36-187 (232)
185 2vdv_E TRNA (guanine-N(7)-)-me 99.6 3.8E-14 1.3E-18 118.7 14.0 106 124-231 48-173 (246)
186 1i9g_A Hypothetical protein RV 99.6 1.7E-14 5.9E-19 123.0 11.8 104 124-233 98-205 (280)
187 1jg1_A PIMT;, protein-L-isoasp 99.6 2.2E-14 7.4E-19 119.3 12.0 101 124-233 90-191 (235)
188 2hnk_A SAM-dependent O-methylt 99.6 4.3E-14 1.5E-18 117.8 13.8 149 78-232 13-182 (239)
189 3b3j_A Histone-arginine methyl 99.6 1.6E-14 5.5E-19 131.9 12.1 113 114-229 146-261 (480)
190 3cbg_A O-methyltransferase; cy 99.6 4.1E-14 1.4E-18 117.4 13.4 105 125-233 72-184 (232)
191 3r3h_A O-methyltransferase, SA 99.6 3.1E-15 1.1E-19 125.0 6.5 115 113-233 50-172 (242)
192 1i1n_A Protein-L-isoaspartate 99.6 3E-14 1E-18 117.7 12.3 105 123-233 75-184 (226)
193 2igt_A SAM dependent methyltra 99.6 5.5E-14 1.9E-18 122.6 14.5 109 124-233 152-274 (332)
194 2pbf_A Protein-L-isoaspartate 99.6 2.4E-14 8.3E-19 118.3 11.2 104 124-233 79-195 (227)
195 1iy9_A Spermidine synthase; ro 99.5 3.1E-13 1E-17 114.9 17.6 108 124-231 74-189 (275)
196 1g8a_A Fibrillarin-like PRE-rR 99.5 2E-13 6.9E-18 112.8 15.6 101 124-231 72-178 (227)
197 3a27_A TYW2, uncharacterized p 99.5 6.8E-14 2.3E-18 118.9 13.0 105 124-235 118-223 (272)
198 1r18_A Protein-L-isoaspartate( 99.5 2.3E-14 7.9E-19 118.5 9.6 102 124-232 83-195 (227)
199 2yvl_A TRMI protein, hypotheti 99.5 1.3E-13 4.6E-18 115.3 14.4 102 124-232 90-191 (248)
200 1sui_A Caffeoyl-COA O-methyltr 99.5 3.8E-14 1.3E-18 118.8 10.6 103 125-231 79-190 (247)
201 1o9g_A RRNA methyltransferase; 99.5 1.1E-14 3.8E-19 122.3 7.1 108 125-233 51-216 (250)
202 1inl_A Spermidine synthase; be 99.5 2.8E-13 9.7E-18 116.4 16.0 108 124-231 89-205 (296)
203 2pt6_A Spermidine synthase; tr 99.5 2.3E-13 7.8E-18 118.2 15.3 109 124-232 115-231 (321)
204 2avd_A Catechol-O-methyltransf 99.5 1E-13 3.6E-18 114.6 12.6 105 124-232 68-180 (229)
205 2b78_A Hypothetical protein SM 99.5 1.5E-13 5E-18 122.5 14.3 145 124-288 211-368 (385)
206 3v97_A Ribosomal RNA large sub 99.5 9.4E-14 3.2E-18 132.4 12.7 138 125-288 539-688 (703)
207 1uir_A Polyamine aminopropyltr 99.5 3.3E-13 1.1E-17 116.9 14.8 108 124-231 76-195 (314)
208 2plw_A Ribosomal RNA methyltra 99.5 1.3E-13 4.4E-18 111.6 11.2 96 124-232 21-155 (201)
209 3tma_A Methyltransferase; thum 99.5 1.7E-13 5.8E-18 120.9 12.8 107 124-232 202-318 (354)
210 2qm3_A Predicted methyltransfe 99.5 1.4E-12 4.9E-17 115.7 18.8 103 125-231 172-278 (373)
211 1mjf_A Spermidine synthase; sp 99.5 5.2E-13 1.8E-17 113.9 15.3 106 124-231 74-193 (281)
212 1nv8_A HEMK protein; class I a 99.5 1.6E-13 5.4E-18 117.3 11.8 103 125-231 123-249 (284)
213 2bm8_A Cephalosporin hydroxyla 99.5 6.7E-14 2.3E-18 116.4 9.2 98 125-232 81-188 (236)
214 3k6r_A Putative transferase PH 99.5 5.3E-13 1.8E-17 112.9 14.5 132 123-279 123-254 (278)
215 2o07_A Spermidine synthase; st 99.5 2.2E-13 7.7E-18 117.3 12.1 108 124-231 94-209 (304)
216 3tm4_A TRNA (guanine N2-)-meth 99.5 4.4E-13 1.5E-17 118.9 14.2 130 123-283 215-353 (373)
217 3c0k_A UPF0064 protein YCCW; P 99.5 6.8E-13 2.3E-17 118.8 15.3 111 124-235 219-343 (396)
218 3gjy_A Spermidine synthase; AP 99.5 3.1E-13 1.1E-17 116.1 12.0 105 126-232 90-201 (317)
219 3c3y_A Pfomt, O-methyltransfer 99.5 2.7E-13 9.2E-18 112.9 11.3 104 125-232 70-182 (237)
220 2cmg_A Spermidine synthase; tr 99.5 3.9E-13 1.3E-17 113.3 12.4 99 124-231 71-171 (262)
221 1xj5_A Spermidine synthase 1; 99.5 6.2E-13 2.1E-17 115.9 13.9 108 124-231 119-235 (334)
222 3dou_A Ribosomal RNA large sub 99.5 1.2E-13 4.2E-18 111.0 8.7 96 124-233 24-141 (191)
223 2i7c_A Spermidine synthase; tr 99.5 1.1E-12 3.8E-17 112.0 15.1 109 124-232 77-193 (283)
224 2b2c_A Spermidine synthase; be 99.5 2.5E-13 8.4E-18 117.5 11.1 108 124-231 107-222 (314)
225 2yxl_A PH0851 protein, 450AA l 99.5 9.7E-13 3.3E-17 119.6 15.3 110 124-235 258-393 (450)
226 1wy7_A Hypothetical protein PH 99.5 2.1E-12 7.2E-17 105.0 15.2 126 124-282 48-175 (207)
227 1ne2_A Hypothetical protein TA 99.5 1E-12 3.6E-17 106.3 13.2 95 124-231 50-146 (200)
228 1wxx_A TT1595, hypothetical pr 99.4 5.4E-13 1.8E-17 118.8 12.4 108 125-235 209-329 (382)
229 3ajd_A Putative methyltransfer 99.4 2.7E-13 9.2E-18 115.3 10.0 109 124-234 82-214 (274)
230 2nyu_A Putative ribosomal RNA 99.4 7.4E-13 2.5E-17 106.7 11.5 98 124-234 21-148 (196)
231 2as0_A Hypothetical protein PH 99.4 6.8E-13 2.3E-17 118.8 12.2 114 121-235 213-339 (396)
232 3lcv_B Sisomicin-gentamicin re 99.4 2.1E-12 7E-17 106.5 13.8 112 116-232 124-237 (281)
233 4dmg_A Putative uncharacterize 99.4 3.4E-12 1.2E-16 113.6 16.1 114 119-236 208-331 (393)
234 2wa2_A Non-structural protein 99.4 8.7E-14 3E-18 118.1 5.3 103 124-233 81-195 (276)
235 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.8E-12 3E-16 112.7 18.7 149 114-298 274-427 (433)
236 2oxt_A Nucleoside-2'-O-methylt 99.4 1.3E-13 4.5E-18 116.3 5.2 103 124-233 73-187 (265)
237 3frh_A 16S rRNA methylase; met 99.4 3.1E-12 1E-16 104.5 11.9 102 124-231 104-206 (253)
238 1zq9_A Probable dimethyladenos 99.4 1.7E-12 5.7E-17 111.0 10.5 108 117-228 19-144 (285)
239 2yx1_A Hypothetical protein MJ 99.4 7E-12 2.4E-16 109.6 13.7 102 124-235 194-295 (336)
240 3m4x_A NOL1/NOP2/SUN family pr 99.4 2.2E-12 7.5E-17 116.5 10.7 110 124-235 104-238 (456)
241 2frx_A Hypothetical protein YE 99.4 3.8E-12 1.3E-16 116.0 11.7 108 125-234 117-249 (479)
242 3m6w_A RRNA methylase; rRNA me 99.4 2.2E-12 7.5E-17 116.6 9.9 108 124-234 100-232 (464)
243 2f8l_A Hypothetical protein LM 99.3 7.8E-12 2.7E-16 109.8 11.9 120 111-234 114-259 (344)
244 2p41_A Type II methyltransfera 99.3 3.1E-12 1.1E-16 110.1 8.1 103 124-234 81-194 (305)
245 1sqg_A SUN protein, FMU protei 99.3 1.1E-11 3.7E-16 112.0 11.8 109 124-235 245-378 (429)
246 3bt7_A TRNA (uracil-5-)-methyl 99.3 1.2E-11 4.1E-16 109.6 11.5 145 116-298 204-364 (369)
247 2jjq_A Uncharacterized RNA met 99.3 1.8E-10 6.2E-15 103.5 18.6 99 124-231 289-387 (425)
248 2h1r_A Dimethyladenosine trans 99.3 3.3E-11 1.1E-15 103.6 12.7 97 124-225 41-153 (299)
249 2xyq_A Putative 2'-O-methyl tr 99.3 1.8E-11 6.3E-16 104.1 10.2 114 124-280 62-195 (290)
250 2qfm_A Spermine synthase; sper 99.2 4.6E-11 1.6E-15 103.8 11.5 109 124-232 187-315 (364)
251 3b5i_A S-adenosyl-L-methionine 99.2 6.6E-10 2.2E-14 97.7 17.4 159 126-284 53-300 (374)
252 1qam_A ERMC' methyltransferase 99.2 8.1E-12 2.8E-16 104.3 3.4 80 115-200 19-100 (244)
253 3gru_A Dimethyladenosine trans 99.2 1.4E-10 4.7E-15 99.0 10.5 83 116-203 40-123 (295)
254 3k0b_A Predicted N6-adenine-sp 99.1 5.3E-10 1.8E-14 99.5 13.0 107 124-232 200-351 (393)
255 1yub_A Ermam, rRNA methyltrans 99.1 3.4E-13 1.2E-17 112.8 -8.0 101 124-231 28-145 (245)
256 3ldg_A Putative uncharacterize 99.1 1.2E-09 4.1E-14 96.8 14.3 107 124-232 193-344 (384)
257 2okc_A Type I restriction enzy 99.1 2.4E-10 8.1E-15 103.8 9.9 109 124-233 170-309 (445)
258 2efj_A 3,7-dimethylxanthine me 99.1 6.4E-10 2.2E-14 97.8 12.1 154 126-283 53-293 (384)
259 3ldu_A Putative methylase; str 99.1 1E-09 3.6E-14 97.4 13.3 107 124-232 194-345 (385)
260 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.7E-09 5.8E-14 93.1 13.1 108 124-234 101-237 (309)
261 3cvo_A Methyltransferase-like 99.1 3.1E-09 1.1E-13 85.2 13.2 99 125-231 30-154 (202)
262 2ih2_A Modification methylase 99.1 5.4E-10 1.8E-14 100.7 9.8 97 125-233 39-166 (421)
263 4gqb_A Protein arginine N-meth 99.0 1.5E-09 5.3E-14 101.1 12.6 101 125-228 357-464 (637)
264 2dul_A N(2),N(2)-dimethylguano 99.0 2.6E-10 8.8E-15 100.9 7.0 101 125-231 47-164 (378)
265 3tqs_A Ribosomal RNA small sub 99.0 1.3E-09 4.3E-14 91.3 10.0 79 116-200 19-102 (255)
266 3axs_A Probable N(2),N(2)-dime 99.0 7.7E-10 2.6E-14 98.0 8.3 102 125-231 52-158 (392)
267 1m6e_X S-adenosyl-L-methionnin 99.0 1.9E-09 6.6E-14 94.0 9.4 157 125-282 51-280 (359)
268 3o4f_A Spermidine synthase; am 98.9 8.4E-08 2.9E-12 81.2 18.6 108 124-231 82-198 (294)
269 3fut_A Dimethyladenosine trans 98.9 1.9E-09 6.5E-14 90.9 8.5 80 116-202 37-118 (271)
270 3ftd_A Dimethyladenosine trans 98.9 5.2E-09 1.8E-13 87.3 10.8 88 115-208 20-108 (249)
271 3ua3_A Protein arginine N-meth 98.9 5E-09 1.7E-13 97.6 10.7 101 126-228 410-531 (745)
272 1m6y_A S-adenosyl-methyltransf 98.9 1.7E-09 6E-14 92.5 6.1 76 124-202 25-106 (301)
273 2r6z_A UPF0341 protein in RSP 98.9 2.2E-09 7.5E-14 90.1 6.3 79 125-205 83-172 (258)
274 3v97_A Ribosomal RNA large sub 98.9 1.6E-08 5.3E-13 96.5 12.6 108 124-232 189-348 (703)
275 2qy6_A UPF0209 protein YFCK; s 98.9 2.3E-09 7.9E-14 89.7 5.9 128 124-280 59-233 (257)
276 3evf_A RNA-directed RNA polyme 98.8 3.6E-09 1.2E-13 87.9 6.3 121 124-248 73-203 (277)
277 3ll7_A Putative methyltransfer 98.8 5.2E-09 1.8E-13 92.9 7.5 74 125-201 93-170 (410)
278 3lkd_A Type I restriction-modi 98.8 7.6E-08 2.6E-12 88.9 14.5 124 111-234 205-361 (542)
279 2ar0_A M.ecoki, type I restric 98.8 8.3E-09 2.8E-13 95.6 7.7 111 124-234 168-315 (541)
280 3uzu_A Ribosomal RNA small sub 98.8 1.5E-08 5.2E-13 85.8 8.5 69 117-191 33-105 (279)
281 1qyr_A KSGA, high level kasuga 98.7 9.6E-09 3.3E-13 85.8 5.9 68 117-191 12-82 (252)
282 3khk_A Type I restriction-modi 98.7 5.6E-08 1.9E-12 89.9 9.1 110 123-233 242-397 (544)
283 3gcz_A Polyprotein; flavivirus 98.6 3E-08 1E-12 82.4 4.5 106 124-233 89-203 (282)
284 3c6k_A Spermine synthase; sper 98.6 1.6E-07 5.3E-12 82.0 9.1 108 124-231 204-331 (381)
285 2oyr_A UPF0341 protein YHIQ; a 98.6 4.9E-08 1.7E-12 81.6 5.6 96 127-225 90-194 (258)
286 2wk1_A NOVP; transferase, O-me 98.6 4.2E-07 1.4E-11 76.7 10.9 107 124-232 105-245 (282)
287 3s1s_A Restriction endonucleas 98.5 8.1E-07 2.8E-11 84.2 11.1 110 125-234 321-468 (878)
288 4auk_A Ribosomal RNA large sub 98.4 3.8E-06 1.3E-10 73.0 14.0 122 123-275 209-333 (375)
289 1wg8_A Predicted S-adenosylmet 98.3 1.2E-06 4.1E-11 73.2 7.4 81 115-202 11-97 (285)
290 4fzv_A Putative methyltransfer 98.3 3.5E-06 1.2E-10 73.6 10.4 113 124-236 147-289 (359)
291 2vz8_A Fatty acid synthase; tr 98.3 1.8E-07 6.1E-12 100.2 2.6 147 124-280 1239-1393(2512)
292 3eld_A Methyltransferase; flav 98.3 1.9E-06 6.5E-11 72.1 7.8 120 124-248 80-210 (300)
293 2k4m_A TR8_protein, UPF0146 pr 98.3 1.8E-06 6.1E-11 64.5 6.3 86 125-232 35-122 (153)
294 1rjd_A PPM1P, carboxy methyl t 98.1 0.00018 6.2E-09 62.3 15.9 149 124-275 96-281 (334)
295 3lkz_A Non-structural protein 98.0 5.4E-05 1.8E-09 63.1 11.7 105 124-234 93-207 (321)
296 2px2_A Genome polyprotein [con 98.0 3.5E-05 1.2E-09 63.1 9.6 101 122-233 70-185 (269)
297 3ufb_A Type I restriction-modi 97.9 0.00011 3.8E-09 67.7 12.5 108 124-233 216-364 (530)
298 3p8z_A Mtase, non-structural p 97.9 4.6E-05 1.6E-09 61.5 8.1 106 124-236 77-191 (267)
299 2zig_A TTHA0409, putative modi 97.8 4.3E-05 1.5E-09 65.3 7.9 58 113-171 223-280 (297)
300 2uyo_A Hypothetical protein ML 97.8 0.0028 9.7E-08 54.1 18.9 151 126-279 103-276 (310)
301 3r24_A NSP16, 2'-O-methyl tran 97.7 0.00036 1.2E-08 58.2 10.8 98 124-236 108-222 (344)
302 3vyw_A MNMC2; tRNA wobble urid 97.6 0.0002 6.7E-09 60.8 8.6 128 125-281 96-247 (308)
303 1g60_A Adenine-specific methyl 97.4 0.00034 1.2E-08 58.4 7.6 59 113-172 200-258 (260)
304 3iei_A Leucine carboxyl methyl 97.4 0.037 1.2E-06 47.7 20.1 165 112-280 78-279 (334)
305 3tka_A Ribosomal RNA small sub 97.3 0.00055 1.9E-08 58.6 7.2 84 114-203 45-137 (347)
306 3g7u_A Cytosine-specific methy 97.2 0.0099 3.4E-07 52.2 14.4 100 127-235 3-122 (376)
307 1g55_A DNA cytosine methyltran 97.2 0.0018 6.2E-08 56.3 9.5 71 126-203 2-77 (343)
308 3qv2_A 5-cytosine DNA methyltr 97.1 0.013 4.3E-07 50.5 14.1 127 124-278 8-156 (327)
309 1i4w_A Mitochondrial replicati 97.0 0.002 6.9E-08 56.0 7.7 59 125-188 58-117 (353)
310 3tos_A CALS11; methyltransfera 97.0 0.012 4E-07 48.7 11.9 113 118-232 62-218 (257)
311 2c7p_A Modification methylase 96.7 0.071 2.4E-06 45.8 15.8 125 125-277 10-148 (327)
312 4h0n_A DNMT2; SAH binding, tra 96.5 0.024 8E-07 48.9 11.2 124 127-279 4-146 (333)
313 2oo3_A Protein involved in cat 96.4 0.0026 9E-08 53.1 4.0 102 125-231 91-198 (283)
314 1f8f_A Benzyl alcohol dehydrog 96.2 0.011 3.9E-07 51.7 7.4 96 124-233 189-291 (371)
315 3two_A Mannitol dehydrogenase; 96.1 0.011 3.7E-07 51.4 6.7 93 124-234 175-268 (348)
316 2dph_A Formaldehyde dismutase; 96.0 0.0063 2.1E-07 53.9 4.9 101 124-233 184-301 (398)
317 1zkd_A DUF185; NESG, RPR58, st 96.0 0.05 1.7E-06 47.7 10.4 95 106-208 60-163 (387)
318 3ubt_Y Modification methylase 96.0 0.12 4E-06 44.3 12.7 123 127-276 1-137 (331)
319 3fpc_A NADP-dependent alcohol 95.9 0.029 9.8E-07 48.7 8.5 96 124-233 165-268 (352)
320 1kol_A Formaldehyde dehydrogen 95.8 0.017 5.8E-07 51.1 6.8 100 124-232 184-301 (398)
321 2zwa_A Leucine carboxyl methyl 95.8 0.84 2.9E-05 43.4 18.8 167 111-280 92-307 (695)
322 1pqw_A Polyketide synthase; ro 95.7 0.013 4.4E-07 46.3 5.1 96 124-233 37-139 (198)
323 1boo_A Protein (N-4 cytosine-s 95.6 0.016 5.4E-07 49.8 5.8 58 114-172 241-298 (323)
324 3uog_A Alcohol dehydrogenase; 95.6 0.03 1E-06 48.9 7.6 96 124-234 188-290 (363)
325 3s2e_A Zinc-containing alcohol 95.6 0.016 5.5E-07 50.1 5.8 96 124-233 165-265 (340)
326 3ip1_A Alcohol dehydrogenase, 95.4 0.12 4E-06 45.7 10.9 97 124-233 212-320 (404)
327 1uuf_A YAHK, zinc-type alcohol 95.4 0.027 9.4E-07 49.2 6.6 94 124-232 193-289 (369)
328 1eg2_A Modification methylase 95.4 0.023 7.7E-07 48.8 5.8 59 113-172 230-291 (319)
329 3goh_A Alcohol dehydrogenase, 95.2 0.018 6.1E-07 49.2 4.8 88 124-231 141-229 (315)
330 1pl8_A Human sorbitol dehydrog 95.2 0.03 1E-06 48.7 6.2 95 124-232 170-274 (356)
331 4ej6_A Putative zinc-binding d 95.1 0.015 5.2E-07 50.9 4.1 97 124-234 181-287 (370)
332 4f3n_A Uncharacterized ACR, CO 95.1 0.17 5.8E-06 45.0 10.7 64 105-170 119-188 (432)
333 3m6i_A L-arabinitol 4-dehydrog 95.1 0.13 4.5E-06 44.6 10.0 98 124-233 178-285 (363)
334 3me5_A Cytosine-specific methy 95.1 0.24 8.1E-06 44.9 11.6 74 126-203 88-178 (482)
335 1e3j_A NADP(H)-dependent ketos 94.9 0.097 3.3E-06 45.3 8.6 95 124-232 167-272 (352)
336 2h6e_A ADH-4, D-arabinose 1-de 94.9 0.048 1.7E-06 47.1 6.6 94 125-233 170-271 (344)
337 2py6_A Methyltransferase FKBM; 94.8 0.079 2.7E-06 47.0 7.8 61 124-185 225-291 (409)
338 3pvc_A TRNA 5-methylaminomethy 94.8 0.071 2.4E-06 50.7 7.9 127 125-280 58-231 (689)
339 1v3u_A Leukotriene B4 12- hydr 94.8 0.058 2E-06 46.3 6.7 95 124-232 144-245 (333)
340 3gms_A Putative NADPH:quinone 94.8 0.04 1.4E-06 47.5 5.7 95 124-233 143-245 (340)
341 4dcm_A Ribosomal RNA large sub 94.8 0.56 1.9E-05 41.0 13.1 115 125-247 38-152 (375)
342 3jyn_A Quinone oxidoreductase; 94.7 0.052 1.8E-06 46.5 6.2 96 124-234 139-242 (325)
343 2d8a_A PH0655, probable L-thre 94.7 0.092 3.2E-06 45.4 7.8 95 125-233 167-269 (348)
344 3fwz_A Inner membrane protein 94.6 0.46 1.6E-05 34.9 10.6 92 126-231 7-105 (140)
345 4eye_A Probable oxidoreductase 94.6 0.052 1.8E-06 46.9 5.9 93 124-232 158-258 (342)
346 2eih_A Alcohol dehydrogenase; 94.6 0.13 4.4E-06 44.4 8.4 95 124-233 165-267 (343)
347 3ps9_A TRNA 5-methylaminomethy 94.6 0.088 3E-06 49.9 8.0 127 125-280 66-239 (676)
348 3qwb_A Probable quinone oxidor 94.5 0.056 1.9E-06 46.4 6.0 94 124-232 147-248 (334)
349 1cdo_A Alcohol dehydrogenase; 94.4 0.11 3.9E-06 45.3 7.8 96 124-233 191-296 (374)
350 2fzw_A Alcohol dehydrogenase c 94.4 0.12 4E-06 45.1 7.9 95 124-232 189-293 (373)
351 2jhf_A Alcohol dehydrogenase E 94.3 0.12 4.2E-06 45.1 7.9 95 124-232 190-294 (374)
352 2cdc_A Glucose dehydrogenase g 94.3 0.11 3.7E-06 45.3 7.5 89 126-233 181-280 (366)
353 1p0f_A NADP-dependent alcohol 94.2 0.11 3.8E-06 45.4 7.4 96 124-233 190-295 (373)
354 4b7c_A Probable oxidoreductase 94.1 0.051 1.8E-06 46.7 4.8 96 124-233 148-250 (336)
355 1jvb_A NAD(H)-dependent alcoho 94.0 0.072 2.4E-06 46.1 5.7 97 124-233 169-273 (347)
356 2c0c_A Zinc binding alcohol de 94.0 0.11 3.9E-06 45.1 6.8 95 124-233 162-263 (362)
357 2b5w_A Glucose dehydrogenase; 93.9 0.074 2.5E-06 46.2 5.5 94 127-233 174-275 (357)
358 1e3i_A Alcohol dehydrogenase, 93.9 0.16 5.5E-06 44.3 7.7 95 124-232 194-298 (376)
359 3uko_A Alcohol dehydrogenase c 93.8 0.12 4.1E-06 45.2 6.8 96 124-233 192-297 (378)
360 2j8z_A Quinone oxidoreductase; 93.6 0.13 4.5E-06 44.5 6.6 95 124-233 161-263 (354)
361 1yb5_A Quinone oxidoreductase; 93.6 0.13 4.3E-06 44.6 6.5 94 124-232 169-270 (351)
362 1vj0_A Alcohol dehydrogenase, 93.6 0.11 3.6E-06 45.7 6.0 96 124-233 194-300 (380)
363 2j3h_A NADP-dependent oxidored 93.6 0.13 4.6E-06 44.2 6.5 96 124-232 154-256 (345)
364 1piw_A Hypothetical zinc-type 93.6 0.06 2E-06 46.8 4.3 96 124-232 178-277 (360)
365 1qor_A Quinone oxidoreductase; 93.6 0.11 3.9E-06 44.3 6.0 95 124-232 139-240 (327)
366 4dvj_A Putative zinc-dependent 93.5 0.17 5.9E-06 44.0 7.2 93 125-231 171-270 (363)
367 1rjw_A ADH-HT, alcohol dehydro 93.4 0.22 7.4E-06 42.8 7.6 93 124-232 163-262 (339)
368 4dup_A Quinone oxidoreductase; 93.3 0.15 5E-06 44.2 6.4 95 124-233 166-267 (353)
369 1wly_A CAAR, 2-haloacrylate re 93.3 0.2 6.7E-06 43.0 7.1 95 124-233 144-246 (333)
370 2hcy_A Alcohol dehydrogenase 1 93.2 0.13 4.3E-06 44.5 5.8 97 124-233 168-271 (347)
371 3llv_A Exopolyphosphatase-rela 93.2 1.7 6E-05 31.6 11.4 91 126-231 6-103 (141)
372 2qrv_A DNA (cytosine-5)-methyl 93.0 0.16 5.5E-06 42.9 5.9 70 124-201 14-90 (295)
373 1iz0_A Quinone oxidoreductase; 92.8 0.048 1.6E-06 46.2 2.4 94 123-232 123-219 (302)
374 2cf5_A Atccad5, CAD, cinnamyl 92.7 0.11 3.6E-06 45.2 4.5 97 125-233 180-277 (357)
375 3jv7_A ADH-A; dehydrogenase, n 92.6 0.12 4.2E-06 44.5 4.9 97 124-234 170-273 (345)
376 2zig_A TTHA0409, putative modi 92.6 0.074 2.5E-06 45.0 3.3 56 176-231 20-97 (297)
377 3swr_A DNA (cytosine-5)-methyl 92.5 2.7 9.4E-05 41.5 14.5 71 125-202 539-626 (1002)
378 3fbg_A Putative arginate lyase 92.2 0.32 1.1E-05 41.8 7.0 93 125-231 150-248 (346)
379 3nx4_A Putative oxidoreductase 92.2 0.14 4.6E-06 43.7 4.5 92 128-233 149-243 (324)
380 1yqd_A Sinapyl alcohol dehydro 92.0 0.13 4.4E-06 44.8 4.2 96 125-232 187-283 (366)
381 3krt_A Crotonyl COA reductase; 91.9 0.48 1.6E-05 42.5 8.0 94 124-232 227-345 (456)
382 2dq4_A L-threonine 3-dehydroge 91.8 0.024 8.1E-07 49.1 -0.7 93 125-232 164-263 (343)
383 2zb4_A Prostaglandin reductase 91.8 0.26 8.9E-06 42.6 5.9 95 124-232 157-261 (357)
384 1xa0_A Putative NADPH dependen 91.5 0.16 5.5E-06 43.4 4.3 94 125-232 148-247 (328)
385 4dkj_A Cytosine-specific methy 91.3 2 6.8E-05 37.8 11.0 44 126-169 10-59 (403)
386 3gaz_A Alcohol dehydrogenase s 91.2 0.46 1.6E-05 40.8 6.9 91 124-232 149-247 (343)
387 4eez_A Alcohol dehydrogenase 1 90.9 0.59 2E-05 40.1 7.3 98 124-232 162-264 (348)
388 3tqh_A Quinone oxidoreductase; 90.1 0.73 2.5E-05 39.1 7.1 92 124-231 151-245 (321)
389 4ft4_B DNA (cytosine-5)-methyl 90.1 7.5 0.00025 37.4 14.8 45 124-168 210-260 (784)
390 1boo_A Protein (N-4 cytosine-s 90.0 0.29 1E-05 41.8 4.5 56 176-231 13-84 (323)
391 3ius_A Uncharacterized conserv 89.8 4.9 0.00017 32.9 11.9 92 127-231 6-102 (286)
392 4a0s_A Octenoyl-COA reductase/ 89.6 0.85 2.9E-05 40.7 7.4 96 124-232 219-337 (447)
393 1tt7_A YHFP; alcohol dehydroge 89.5 0.37 1.3E-05 41.1 4.7 94 125-232 149-248 (330)
394 3c85_A Putative glutathione-re 89.3 1.2 4.2E-05 34.1 7.3 93 125-231 38-139 (183)
395 4a2c_A Galactitol-1-phosphate 89.1 2.6 9.1E-05 35.9 10.0 97 124-234 159-263 (346)
396 3gqv_A Enoyl reductase; medium 88.4 1.1 3.8E-05 38.9 7.1 93 124-231 163-263 (371)
397 3dmg_A Probable ribosomal RNA 88.3 3.2 0.00011 36.2 9.9 97 125-234 45-142 (381)
398 1pjc_A Protein (L-alanine dehy 87.7 0.24 8.1E-06 43.1 2.3 102 125-232 166-268 (361)
399 3grk_A Enoyl-(acyl-carrier-pro 87.2 6.9 0.00024 32.5 11.1 103 125-232 30-170 (293)
400 2vn8_A Reticulon-4-interacting 87.1 1 3.5E-05 39.2 6.0 95 124-232 182-281 (375)
401 1lss_A TRK system potassium up 87.0 6.6 0.00022 28.0 12.2 90 126-229 4-100 (140)
402 3oig_A Enoyl-[acyl-carrier-pro 86.7 5.4 0.00018 32.4 10.0 106 125-233 6-149 (266)
403 2vhw_A Alanine dehydrogenase; 86.6 0.29 1E-05 42.8 2.3 99 125-231 167-268 (377)
404 3pxx_A Carveol dehydrogenase; 86.0 6.6 0.00023 32.2 10.3 104 125-232 9-154 (287)
405 3p2y_A Alanine dehydrogenase/p 85.8 0.22 7.6E-06 43.5 1.1 97 125-230 183-301 (381)
406 3av4_A DNA (cytosine-5)-methyl 85.8 20 0.0007 36.5 15.1 44 125-168 850-894 (1330)
407 3v2g_A 3-oxoacyl-[acyl-carrier 85.6 8.5 0.00029 31.5 10.7 105 124-232 29-166 (271)
408 2eez_A Alanine dehydrogenase; 85.5 0.65 2.2E-05 40.4 3.9 99 125-231 165-266 (369)
409 3ioy_A Short-chain dehydrogena 85.4 6.4 0.00022 33.2 10.1 78 125-204 7-97 (319)
410 4eso_A Putative oxidoreductase 85.3 3.4 0.00012 33.5 8.1 101 125-232 7-139 (255)
411 3ce6_A Adenosylhomocysteinase; 84.9 2.3 7.8E-05 38.5 7.3 91 124-233 272-363 (494)
412 4dio_A NAD(P) transhydrogenase 84.9 0.33 1.1E-05 42.8 1.7 42 125-166 189-231 (405)
413 3l9w_A Glutathione-regulated p 84.8 2.2 7.4E-05 37.8 7.0 92 126-231 4-102 (413)
414 1zsy_A Mitochondrial 2-enoyl t 84.7 1.7 5.9E-05 37.4 6.3 97 124-231 166-270 (357)
415 3tjr_A Short chain dehydrogena 84.6 5.4 0.00018 33.3 9.2 77 125-205 30-119 (301)
416 2km1_A Protein DRE2; yeast, an 84.3 0.76 2.6E-05 33.7 3.1 41 189-229 54-96 (136)
417 3ek2_A Enoyl-(acyl-carrier-pro 83.7 5 0.00017 32.6 8.5 105 124-232 12-154 (271)
418 3k31_A Enoyl-(acyl-carrier-pro 83.3 4.1 0.00014 34.0 7.9 104 125-232 29-169 (296)
419 3ijr_A Oxidoreductase, short c 83.2 7.8 0.00027 32.1 9.6 104 125-232 46-183 (291)
420 3r3s_A Oxidoreductase; structu 83.1 8.3 0.00028 32.0 9.7 105 125-233 48-187 (294)
421 4fs3_A Enoyl-[acyl-carrier-pro 82.3 7.1 0.00024 31.7 8.8 106 125-233 5-148 (256)
422 1x13_A NAD(P) transhydrogenase 82.1 0.45 1.6E-05 42.0 1.5 41 125-165 171-212 (401)
423 2g1u_A Hypothetical protein TM 82.0 2.8 9.4E-05 31.1 5.7 95 124-231 17-118 (155)
424 1l7d_A Nicotinamide nucleotide 81.9 0.55 1.9E-05 41.1 1.9 42 125-166 171-213 (384)
425 1wma_A Carbonyl reductase [NAD 81.8 4.9 0.00017 32.5 7.7 104 125-232 3-139 (276)
426 3pi7_A NADH oxidoreductase; gr 81.8 0.7 2.4E-05 39.7 2.6 91 127-232 166-264 (349)
427 1ja9_A 4HNR, 1,3,6,8-tetrahydr 80.8 5.2 0.00018 32.5 7.5 76 125-204 20-109 (274)
428 3edm_A Short chain dehydrogena 80.7 4.4 0.00015 33.0 7.0 104 125-232 7-144 (259)
429 3t7c_A Carveol dehydrogenase; 80.7 13 0.00045 30.8 10.1 76 125-204 27-127 (299)
430 3o26_A Salutaridine reductase; 80.7 12 0.00042 30.8 10.0 78 125-205 11-102 (311)
431 1zcj_A Peroxisomal bifunctiona 80.6 14 0.00047 33.1 10.7 96 127-229 38-148 (463)
432 3e8x_A Putative NAD-dependent 80.5 7.9 0.00027 30.6 8.4 72 125-206 20-96 (236)
433 1eg2_A Modification methylase 80.1 1.2 4.1E-05 38.0 3.3 55 177-231 38-106 (319)
434 3l4b_C TRKA K+ channel protien 79.8 7.4 0.00025 30.6 7.9 90 128-230 2-98 (218)
435 4fgs_A Probable dehydrogenase 79.7 7.4 0.00025 32.2 8.0 101 125-232 28-160 (273)
436 3ksu_A 3-oxoacyl-acyl carrier 79.2 7.5 0.00026 31.6 8.0 103 125-231 10-147 (262)
437 2gdz_A NAD+-dependent 15-hydro 79.2 12 0.00042 30.3 9.3 106 125-232 6-140 (267)
438 4da9_A Short-chain dehydrogena 78.9 9.5 0.00033 31.3 8.6 76 125-204 28-117 (280)
439 3iht_A S-adenosyl-L-methionine 78.7 5.5 0.00019 29.9 6.0 109 114-231 29-147 (174)
440 1id1_A Putative potassium chan 78.7 17 0.00057 26.6 9.4 95 126-231 3-105 (153)
441 1gu7_A Enoyl-[acyl-carrier-pro 78.0 1.7 5.7E-05 37.5 3.7 100 124-232 165-276 (364)
442 1g60_A Adenine-specific methyl 77.7 1.1 3.6E-05 36.9 2.2 21 211-231 54-74 (260)
443 2rir_A Dipicolinate synthase, 77.6 7.7 0.00026 32.4 7.7 88 124-231 155-246 (300)
444 3tsc_A Putative oxidoreductase 77.0 15 0.00051 30.0 9.2 77 125-205 10-112 (277)
445 2hwk_A Helicase NSP2; rossman 76.8 2.6 8.8E-05 35.0 4.2 43 193-235 205-258 (320)
446 4g81_D Putative hexonate dehyd 76.5 29 0.001 28.2 10.8 104 125-232 8-146 (255)
447 3is3_A 17BETA-hydroxysteroid d 76.4 20 0.0007 29.0 9.9 105 125-233 17-154 (270)
448 3d4o_A Dipicolinate synthase s 76.1 6.9 0.00024 32.6 6.9 88 124-231 153-244 (293)
449 4fn4_A Short chain dehydrogena 76.0 10 0.00035 30.9 7.8 75 125-203 6-93 (254)
450 3h2s_A Putative NADH-flavin re 75.8 17 0.00056 28.3 8.9 94 128-231 2-104 (224)
451 1xg5_A ARPG836; short chain de 75.3 25 0.00084 28.6 10.1 78 125-204 31-121 (279)
452 4e6p_A Probable sorbitol dehyd 75.0 16 0.00055 29.4 8.8 73 125-204 7-92 (259)
453 4a27_A Synaptic vesicle membra 75.0 2.2 7.6E-05 36.5 3.7 91 124-232 141-239 (349)
454 3ggo_A Prephenate dehydrogenas 74.9 13 0.00044 31.3 8.4 90 126-229 33-126 (314)
455 3sx2_A Putative 3-ketoacyl-(ac 74.6 13 0.00044 30.4 8.2 104 125-232 12-158 (278)
456 3u5t_A 3-oxoacyl-[acyl-carrier 74.2 15 0.0005 30.0 8.4 104 125-232 26-162 (267)
457 2f1k_A Prephenate dehydrogenas 73.9 13 0.00046 30.3 8.1 84 128-228 2-88 (279)
458 3f9i_A 3-oxoacyl-[acyl-carrier 73.3 32 0.0011 27.2 10.5 74 124-204 12-94 (249)
459 3gvc_A Oxidoreductase, probabl 72.8 23 0.00079 29.0 9.3 74 125-205 28-114 (277)
460 1xhl_A Short-chain dehydrogena 72.0 31 0.0011 28.5 10.0 79 125-204 25-116 (297)
461 2ew2_A 2-dehydropantoate 2-red 71.6 29 0.00099 28.6 9.8 93 127-231 4-108 (316)
462 2dpo_A L-gulonate 3-dehydrogen 71.4 24 0.00084 29.7 9.3 97 127-229 7-121 (319)
463 4imr_A 3-oxoacyl-(acyl-carrier 71.4 28 0.00094 28.4 9.5 76 125-204 32-119 (275)
464 4g65_A TRK system potassium up 71.1 5.6 0.00019 35.7 5.4 66 126-201 3-75 (461)
465 2aef_A Calcium-gated potassium 70.9 21 0.00073 28.2 8.5 91 125-231 8-105 (234)
466 1qsg_A Enoyl-[acyl-carrier-pro 70.0 29 0.00099 27.9 9.3 104 125-232 8-149 (265)
467 3rku_A Oxidoreductase YMR226C; 69.5 45 0.0016 27.3 10.5 78 125-204 32-125 (287)
468 4e12_A Diketoreductase; oxidor 69.2 15 0.00052 30.2 7.4 95 127-228 5-118 (283)
469 2pd4_A Enoyl-[acyl-carrier-pro 68.9 22 0.00076 28.8 8.4 104 125-232 5-145 (275)
470 3gvp_A Adenosylhomocysteinase 68.4 6.2 0.00021 34.9 4.9 89 124-231 218-307 (435)
471 3ucx_A Short chain dehydrogena 67.9 25 0.00087 28.3 8.5 76 125-204 10-98 (264)
472 1a5z_A L-lactate dehydrogenase 66.8 52 0.0018 27.5 10.4 96 128-231 2-116 (319)
473 2g5c_A Prephenate dehydrogenas 66.6 23 0.00078 28.9 8.0 87 128-230 3-95 (281)
474 1f0y_A HCDH, L-3-hydroxyacyl-C 66.6 52 0.0018 27.1 10.3 97 126-228 15-133 (302)
475 1bg6_A N-(1-D-carboxylethyl)-L 66.6 19 0.00064 30.5 7.7 94 127-230 5-108 (359)
476 2hmt_A YUAA protein; RCK, KTN, 66.5 24 0.00083 24.9 7.4 93 125-231 5-104 (144)
477 1lnq_A MTHK channels, potassiu 66.5 21 0.0007 30.2 7.9 89 126-231 115-211 (336)
478 3d1l_A Putative NADP oxidoredu 66.4 15 0.00053 29.7 6.9 88 126-230 10-101 (266)
479 3slk_A Polyketide synthase ext 66.2 4.7 0.00016 38.9 4.1 90 124-232 344-443 (795)
480 3qiv_A Short-chain dehydrogena 66.2 20 0.00069 28.6 7.5 76 125-204 8-96 (253)
481 1ae1_A Tropinone reductase-I; 66.1 16 0.00055 29.7 6.9 76 125-204 20-109 (273)
482 3o38_A Short chain dehydrogena 65.4 23 0.00078 28.5 7.7 77 125-204 21-111 (266)
483 3h7a_A Short chain dehydrogena 65.0 14 0.00049 29.7 6.3 75 125-204 6-93 (252)
484 1wg8_A Predicted S-adenosylmet 65.0 1.7 5.7E-05 36.2 0.6 35 208-242 210-244 (285)
485 2i6t_A Ubiquitin-conjugating e 64.6 29 0.001 29.0 8.3 99 125-232 13-126 (303)
486 2p91_A Enoyl-[acyl-carrier-pro 64.5 37 0.0013 27.6 8.9 104 125-232 20-161 (285)
487 3hwr_A 2-dehydropantoate 2-red 63.8 63 0.0022 26.9 10.8 95 125-232 18-121 (318)
488 1yb1_A 17-beta-hydroxysteroid 63.7 32 0.0011 27.8 8.3 76 125-204 30-118 (272)
489 3svt_A Short-chain type dehydr 63.5 24 0.00081 28.8 7.5 79 125-204 10-101 (281)
490 3ojo_A CAP5O; rossmann fold, c 63.5 44 0.0015 29.5 9.5 39 126-166 11-52 (431)
491 3tka_A Ribosomal RNA small sub 63.2 2.5 8.7E-05 36.1 1.4 37 209-245 252-288 (347)
492 1g0o_A Trihydroxynaphthalene r 63.1 43 0.0015 27.2 9.1 104 125-232 28-164 (283)
493 4e21_A 6-phosphogluconate dehy 62.8 8.9 0.0003 33.1 4.8 90 125-229 21-113 (358)
494 3gt0_A Pyrroline-5-carboxylate 62.5 8.3 0.00028 31.0 4.4 86 127-228 3-94 (247)
495 3c24_A Putative oxidoreductase 62.5 26 0.00089 28.7 7.6 84 127-228 12-98 (286)
496 2h7i_A Enoyl-[acyl-carrier-pro 62.3 9.5 0.00033 31.0 4.8 102 125-232 6-149 (269)
497 1fmc_A 7 alpha-hydroxysteroid 62.3 40 0.0014 26.7 8.6 76 125-204 10-98 (255)
498 4egf_A L-xylulose reductase; s 62.2 60 0.002 26.1 10.3 77 125-205 19-109 (266)
499 3n58_A Adenosylhomocysteinase; 62.0 8.8 0.0003 34.2 4.6 89 124-231 245-334 (464)
500 2cvz_A Dehydrogenase, 3-hydrox 61.9 27 0.00093 28.4 7.6 85 128-230 3-89 (289)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.94 E-value=2.7e-25 Score=188.12 Aligned_cols=186 Identities=15% Similarity=0.230 Sum_probs=140.4
Q ss_pred HHHHHhhhhHhHHHHHHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC---CCceEEEEcCCHHHHHHHHHHHHHcC
Q 022248 96 YASVMNSSMKSYEAEVAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD---TDVQVLGVDPNRKMEKYAQTAAVAAG 172 (300)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~~~giD~s~~~~~~a~~~~~~~~ 172 (300)
|.+...+..+.|.. +.+.+..+......++.+|||||||+|.++..+++. ++.+++|+|+|+.|++.|++++...+
T Consensus 42 fdd~i~rsvP~Y~~-~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~ 120 (261)
T 4gek_A 42 FPDMIQRSVPGYSN-IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK 120 (261)
T ss_dssp HHHHHHHHSTTHHH-HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC
T ss_pred hhhhHhhcCCCHHH-HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc
Confidence 33333333445654 445566677777778999999999999999999874 56799999999999999999998877
Q ss_pred CCCCCEEEEecccCcCCCCCCcccEEEEcccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhh
Q 022248 173 LPLTNFKFLQAVGEAIPVSDASVDAVVGTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDP 250 (300)
Q Consensus 173 ~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (300)
.. .+++|+++|+.+++++ .||+|++.++++++++. ..++++++++|||||+|++.+.....+......+......
T Consensus 121 ~~-~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~ 197 (261)
T 4gek_A 121 AP-TPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHD 197 (261)
T ss_dssp CS-SCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHH
T ss_pred cC-ceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHH
Confidence 64 5899999999998864 69999999999999644 5789999999999999999998776665444443322211
Q ss_pred hhhh----------------hcCCcccchHHHHHHHhcCCcEEEEeeeccC
Q 022248 251 LQQI----------------VSDGCHLTRQTGNNISEAGFSSVELGNAFLS 285 (300)
Q Consensus 251 ~~~~----------------~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 285 (300)
.... ......+.+++.++|+++||+.|++....++
T Consensus 198 ~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~n 248 (261)
T 4gek_A 198 FKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFN 248 (261)
T ss_dssp HHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETT
T ss_pred HHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEecc
Confidence 1100 0012346788999999999999988765554
No 2
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.92 E-value=1.7e-23 Score=172.24 Aligned_cols=168 Identities=20% Similarity=0.212 Sum_probs=130.9
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD 192 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 192 (300)
.....+++.+..++.+|||+|||+|.++..+++.++.+++|+|+++.+++.|++++...++. +++.++.+|+.++++++
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLN-DRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECBTTBCSSCT
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcccc-CceEEEEcCHHHCCCCc
Confidence 34445555555444599999999999999998776779999999999999999999988764 58999999999999999
Q ss_pred CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhh----hhhhh--hcCCcccchHHH
Q 022248 193 ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVD----PLQQI--VSDGCHLTRQTG 266 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~ 266 (300)
++||+|++..+++|+++...+++++.++|||||++++.+..... .....+...+. ..... .....++.+++.
T Consensus 110 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK--ELRDSISAEMIRKNPDWKEFNRKNISQENVERFQ 187 (219)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH--HHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHH
T ss_pred ccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH--HHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHH
Confidence 99999999999999999999999999999999999998754432 22221111111 11110 122345678999
Q ss_pred HHHHhcCCcEEEEeeec
Q 022248 267 NNISEAGFSSVELGNAF 283 (300)
Q Consensus 267 ~~l~~aGf~~v~~~~~~ 283 (300)
++|+++||+.+++....
T Consensus 188 ~~l~~aGf~~v~~~~~~ 204 (219)
T 3dlc_A 188 NVLDEIGISSYEIILGD 204 (219)
T ss_dssp HHHHHHTCSSEEEEEET
T ss_pred HHHHHcCCCeEEEEecC
Confidence 99999999998887543
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.91 E-value=3.2e-23 Score=175.58 Aligned_cols=157 Identities=22% Similarity=0.289 Sum_probs=127.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++.. .+++|+|+|+.+++.|++++...++. ++.++.+|++.+++++++||+|++..+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQ--QVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 467899999999999999998754 49999999999999999999888764 899999999999999999999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
++|++++..+++++.++|||||++++.+...........++.. ........+...++.+++.++|+++||+.+.+....
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNY-VEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHH-HHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHH-HHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 9999999999999999999999999988665444333322222 111111223346678899999999999988887654
Q ss_pred c
Q 022248 284 L 284 (300)
Q Consensus 284 ~ 284 (300)
.
T Consensus 192 ~ 192 (260)
T 1vl5_A 192 K 192 (260)
T ss_dssp E
T ss_pred c
Confidence 3
No 4
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.91 E-value=1.2e-23 Score=179.50 Aligned_cols=169 Identities=23% Similarity=0.242 Sum_probs=135.3
Q ss_pred HHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 111 VAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 111 ~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.......+++.+. .++.+|||||||+|.++..+++..+.+++|+|+|+.+++.+++++...++. +++.++.+|+..++
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLA-NRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEECccccCC
Confidence 3445555666554 567899999999999999998755789999999999999999999888774 57999999999999
Q ss_pred CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHH
Q 022248 190 VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGN 267 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
+++++||+|++..+++|+++...+++++.++|||||++++.+....... .....+.... .........+.+++.+
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 201 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR---AGGGVLSLGGIDEYES 201 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH---HHHTCCCCCCHHHHHH
T ss_pred CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH---hhcCccCCCCHHHHHH
Confidence 9889999999999999999999999999999999999999987653321 1111222111 1112345678899999
Q ss_pred HHHhcCCcEEEEeeec
Q 022248 268 NISEAGFSSVELGNAF 283 (300)
Q Consensus 268 ~l~~aGf~~v~~~~~~ 283 (300)
+|+++||++++++...
T Consensus 202 ~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 202 DVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHTTCEEEEEEECH
T ss_pred HHHHcCCeEEEEEECc
Confidence 9999999998887643
No 5
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.90 E-value=7.5e-23 Score=175.68 Aligned_cols=170 Identities=22% Similarity=0.220 Sum_probs=131.4
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VS 191 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 191 (300)
..+..++..+..++.+|||||||+|.++..+++. +.+++|+|+++.+++.|++++...++. +++.++.+|+.+++ +.
T Consensus 56 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 56 QDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVS-DNMQFIHCAAQDVASHL 133 (285)
T ss_dssp HHHHHHHHHTCSSCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCG-GGEEEEESCGGGTGGGC
T ss_pred HHHHHHHHhcCCCCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCC-cceEEEEcCHHHhhhhc
Confidence 3455566666666789999999999999999876 779999999999999999999887764 58999999999987 77
Q ss_pred CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHH----HHhhhhh-----hhhhcCCcccc
Q 022248 192 DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFW----QNVVDPL-----QQIVSDGCHLT 262 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~ 262 (300)
+++||+|++..++++++++..+++++.++|||||++++..+...... ..... ....... ........++.
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLL-MHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDP 212 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHH-HHHHHTTCHHHHHTTCCCC----CCCSCCBCH
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHH-HHHHHhcCHHHHhhhccccccccCCCCCCCCH
Confidence 89999999999999999999999999999999999999886543210 00000 0000000 01111245678
Q ss_pred hHHHHHHHhcCCcEEEEeeeccC
Q 022248 263 RQTGNNISEAGFSSVELGNAFLS 285 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~~~~~~~ 285 (300)
+++.++|+++||+++++......
T Consensus 213 ~~l~~~l~~aGf~v~~~~~~~~~ 235 (285)
T 4htf_A 213 TQVYLWLEEAGWQIMGKTGVRVF 235 (285)
T ss_dssp HHHHHHHHHTTCEEEEEEEESSS
T ss_pred HHHHHHHHHCCCceeeeeeEEEe
Confidence 99999999999999988866543
No 6
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.90 E-value=2.3e-22 Score=168.32 Aligned_cols=157 Identities=25% Similarity=0.369 Sum_probs=128.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++.. .+++|+|+++.+++.+++++...++. ++.++.+|++.+++++++||+|++..+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVE--NVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCC--SEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCC--CeEEEecccccCCCCCCcEEEEEECCc
Confidence 577899999999999999998753 59999999999999999999887764 899999999999998899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
++|+++...+++++.++|||||++++.+...........++.. ........+...++.+++.++|+++||+.+.+....
T Consensus 97 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 97 AHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNH-LNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKWN 175 (239)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHH-HHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHH-HHHhccccccCCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 9999999999999999999999999998766544333333221 111111222345678899999999999988887654
Q ss_pred c
Q 022248 284 L 284 (300)
Q Consensus 284 ~ 284 (300)
.
T Consensus 176 ~ 176 (239)
T 1xxl_A 176 L 176 (239)
T ss_dssp E
T ss_pred C
Confidence 3
No 7
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.89 E-value=1.1e-22 Score=173.09 Aligned_cols=158 Identities=19% Similarity=0.222 Sum_probs=129.4
Q ss_pred HHHHHhhc--CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 116 SQLFDNLR--GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 116 ~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
..++..+. .++.+|||||||+|.++..+++.+..+++|+|+++.+++.|+++++..++. ++++++.+|+.+++++++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 113 (267)
T 3kkz_A 35 LKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQ-NRVTGIVGSMDDLPFRNE 113 (267)
T ss_dssp HHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCCCTT
T ss_pred HHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCC-cCcEEEEcChhhCCCCCC
Confidence 33444443 567899999999999999999876679999999999999999999988875 579999999999998889
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc---hHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG---TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
+||+|++..+++++ +...+++++.++|||||++++.+....... .....+... .....+.+++.++|+
T Consensus 114 ~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~ 184 (267)
T 3kkz_A 114 ELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDA--------YPEIDTIPNQVAKIH 184 (267)
T ss_dssp CEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHH--------CTTCEEHHHHHHHHH
T ss_pred CEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHh--------CCCCCCHHHHHHHHH
Confidence 99999999999999 899999999999999999999986543222 222222111 224567789999999
Q ss_pred hcCCcEEEEeeec
Q 022248 271 EAGFSSVELGNAF 283 (300)
Q Consensus 271 ~aGf~~v~~~~~~ 283 (300)
++||+++++....
T Consensus 185 ~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 185 KAGYLPVATFILP 197 (267)
T ss_dssp HTTEEEEEEEECC
T ss_pred HCCCEEEEEEECC
Confidence 9999999887543
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.89 E-value=2.9e-22 Score=173.03 Aligned_cols=164 Identities=18% Similarity=0.164 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhh----c-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc
Q 022248 111 VAGYKSQLFDNL----R-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG 185 (300)
Q Consensus 111 ~~~~~~~~~~~~----~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~ 185 (300)
.......++..+ . .++.+|||||||+|.++..+++..+.+++|+|+++.+++.|+++....++. +++.++.+|+
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~ 141 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLA-DNITVKYGSF 141 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCT-TTEEEEECCT
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEEcCc
Confidence 334445555555 3 567899999999999999998754679999999999999999999888774 5899999999
Q ss_pred CcCCCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc---hHHHHHHHhhhhhhhhhcCCcccc
Q 022248 186 EAIPVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG---TFLKFWQNVVDPLQQIVSDGCHLT 262 (300)
Q Consensus 186 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
..+|+++++||+|++..+++|++++..+++++.++|||||++++.++...... ....++.. .......+.
T Consensus 142 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 214 (297)
T 2o57_A 142 LEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDR-------IKLHDMGSL 214 (297)
T ss_dssp TSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHH-------HTCSSCCCH
T ss_pred ccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHH-------hcCCCCCCH
Confidence 99999999999999999999999999999999999999999999986553321 11111111 112235577
Q ss_pred hHHHHHHHhcCCcEEEEeee
Q 022248 263 RQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~~~~ 282 (300)
+++.++|+++||+++++...
T Consensus 215 ~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 215 GLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHCCCeEEEEEEC
Confidence 89999999999999988754
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=2.6e-22 Score=167.27 Aligned_cols=158 Identities=20% Similarity=0.224 Sum_probs=124.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||||||+|.++..+++. ++.+++|+|+++.+++.|++++...+ ++.++++|+..++++ ++||+|++..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCchhccCCC-CCceEEEEeC
Confidence 46789999999999999999874 47899999999999999998864432 799999999999877 8999999999
Q ss_pred cccCcccHH--HHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhh---------------hhhhcCCcccchHH
Q 022248 203 VLCSVKDVD--MTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPL---------------QQIVSDGCHLTRQT 265 (300)
Q Consensus 203 ~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~ 265 (300)
+++++++.. .+++++.++|||||++++.+................+... ........++.+++
T Consensus 118 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (234)
T 3dtn_A 118 SIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQ 197 (234)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHH
Confidence 999998765 5899999999999999999977665543332222211110 11122344677899
Q ss_pred HHHHHhcCCcEEEEeeeccCC
Q 022248 266 GNNISEAGFSSVELGNAFLSN 286 (300)
Q Consensus 266 ~~~l~~aGf~~v~~~~~~~~~ 286 (300)
.++|+++||+.+++......+
T Consensus 198 ~~ll~~aGF~~v~~~~~~~~~ 218 (234)
T 3dtn_A 198 LNWLKEAGFRDVSCIYKYYQF 218 (234)
T ss_dssp HHHHHHTTCEEEEEEEEETTE
T ss_pred HHHHHHcCCCceeeeeeecce
Confidence 999999999999998665553
No 10
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.89 E-value=1.2e-22 Score=167.72 Aligned_cols=151 Identities=19% Similarity=0.260 Sum_probs=119.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++.. .++.++.+|+..++++ ++||+|++..+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~~~~ 115 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVSTYA 115 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEEESC
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEECcc
Confidence 46789999999999999999875 6799999999999999998753 3789999999999887 99999999999
Q ss_pred ccCcccHHH--HHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhh-----hhhhcCCcccchHHHHHHHhcCCcE
Q 022248 204 LCSVKDVDM--TLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPL-----QQIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 204 l~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
++++++... +++++.++|||||.+++.++................... .......+++.+++.++|+++||++
T Consensus 116 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 116 FHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 999998876 999999999999999999866544333322222221111 1111234557889999999999997
Q ss_pred EEEeee
Q 022248 277 VELGNA 282 (300)
Q Consensus 277 v~~~~~ 282 (300)
+.....
T Consensus 196 ~~~~~~ 201 (220)
T 3hnr_A 196 TFTRLN 201 (220)
T ss_dssp EEEECS
T ss_pred EEeecc
Confidence 776643
No 11
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.89 E-value=5e-22 Score=169.65 Aligned_cols=158 Identities=25% Similarity=0.400 Sum_probs=128.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||||||+|.++..+++. ++.+++|+|+++.+++.+++++...++. ++.++.+|+..+++++++||+|++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK--NVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEcccccCCCCCCCeeEEEEec
Confidence 57789999999999999999874 4789999999999999999999888764 89999999999999899999999999
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccC------CCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcE
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA------KDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
++++++++..+++++.++|||||++++.+.... .......++.... ..........++..++.++|+++||++
T Consensus 114 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aGf~~ 192 (276)
T 3mgg_A 114 VLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLI-RVQAYMKGNSLVGRQIYPLLQESGFEK 192 (276)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHH-HHHHHTTCCTTGGGGHHHHHHHTTCEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHH-HHHHhcCCCcchHHHHHHHHHHCCCCe
Confidence 999999999999999999999999999875331 1223333333222 222233345566789999999999999
Q ss_pred EEEeeecc
Q 022248 277 VELGNAFL 284 (300)
Q Consensus 277 v~~~~~~~ 284 (300)
++++...+
T Consensus 193 v~~~~~~~ 200 (276)
T 3mgg_A 193 IRVEPRMV 200 (276)
T ss_dssp EEEEEEEE
T ss_pred EEEeeEEE
Confidence 99886543
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.89 E-value=5.7e-22 Score=167.48 Aligned_cols=150 Identities=17% Similarity=0.237 Sum_probs=124.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++..+.+++|+|+++.+++.+++++...++. .+++++++|+..+++++++||+|++..+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCA-DRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECChhhCCCCCCCEEEEEecCh
Confidence 467899999999999999999865569999999999999999999988875 4699999999999998999999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc---hHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG---TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
++++ +...+++++.++|||||++++.+....... .....+... .....+.+++.++|+++||++++..
T Consensus 124 l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 124 IYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDA--------YPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp SCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHH--------CTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred Hhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHh--------CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 9999 889999999999999999999986533222 222222221 1235678899999999999999876
Q ss_pred eec
Q 022248 281 NAF 283 (300)
Q Consensus 281 ~~~ 283 (300)
...
T Consensus 195 ~~~ 197 (257)
T 3f4k_A 195 ILP 197 (257)
T ss_dssp ECC
T ss_pred ECC
Confidence 443
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.89 E-value=2.2e-22 Score=169.94 Aligned_cols=152 Identities=17% Similarity=0.190 Sum_probs=123.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++..+.+++|+|+++.+++.|+++++..++. +++.++++|+.++++ +++||+|++..+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVS-ERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEECChHhCCc-CCCCCEEEECCC
Confidence 567899999999999999998766779999999999999999999888874 589999999999887 789999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
++++++...+++++.++|||||++++.+...........+.. .+. ........+.+++.++|+++||+.+++..
T Consensus 113 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 113 TWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQ-ACG---VSSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp GGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHH-TTT---CSCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHH-HHh---cccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 999999999999999999999999998865433221111111 111 11112456778999999999999887643
No 14
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.89 E-value=1.3e-22 Score=169.80 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=123.4
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 200 (300)
....++.+|||||||+|.++..+++. +.+++|+|+++.+++.++++. ...++.++.+|+..+++++++||+|++
T Consensus 49 ~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 49 QYVKKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG-----EGPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp HHSCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT-----CBTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred HHcCCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc-----ccCCceEEEcchhcCCCCCCCccEEEE
Confidence 33457889999999999999999876 679999999999999998764 125899999999999998999999999
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
..+++|+++...+++++.++|+|||++++............ .+ ............++.+++.++++++||++++..
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPREN-SY---PRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGG-GG---GGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhh-hh---hhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 99999999999999999999999999999986554322111 01 011111122345677899999999999999987
Q ss_pred eeccC
Q 022248 281 NAFLS 285 (300)
Q Consensus 281 ~~~~~ 285 (300)
..+..
T Consensus 199 ~~~~~ 203 (242)
T 3l8d_A 199 GVYKR 203 (242)
T ss_dssp EEECT
T ss_pred ccccc
Confidence 65443
No 15
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.88 E-value=7e-22 Score=171.04 Aligned_cols=166 Identities=17% Similarity=0.136 Sum_probs=130.2
Q ss_pred HHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 111 VAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 111 ~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
....+..+++.+. .++.+|||||||+|.++..+++..+.+++|+|+|+.+++.|++++...++. +++.++.+|+.++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~- 134 (302)
T 3hem_A 57 QYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSP-RRKEVRIQGWEEF- 134 (302)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCS-SCEEEEECCGGGC-
T ss_pred HHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECCHHHc-
Confidence 3445556666654 567899999999999999998864589999999999999999999988875 5899999999876
Q ss_pred CCCCcccEEEEcccccCcccH---------HHHHHHHHHcccCCcEEEEEecccCCCchHH--------------HHHHH
Q 022248 190 VSDASVDAVVGTLVLCSVKDV---------DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFL--------------KFWQN 246 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--------------~~~~~ 246 (300)
+++||+|++..+++|++++ ..+++++.++|||||++++.+.......... .++.+
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILT 212 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHH
Confidence 6899999999999999554 7899999999999999999887654322111 11211
Q ss_pred hhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeeccC
Q 022248 247 VVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFLS 285 (300)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 285 (300)
... ......+.+++.++++++||++++++....+
T Consensus 213 ~~~-----p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~ 246 (302)
T 3hem_A 213 EIF-----PGGRLPRISQVDYYSSNAGWKVERYHRIGAN 246 (302)
T ss_dssp HTC-----TTCCCCCHHHHHHHHHHHTCEEEEEEECGGG
T ss_pred hcC-----CCCCCCCHHHHHHHHHhCCcEEEEEEeCchh
Confidence 111 1224567889999999999999998765443
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.88 E-value=9.5e-22 Score=162.12 Aligned_cols=144 Identities=21% Similarity=0.305 Sum_probs=123.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+++++...++. ++.++.+|+..+++++++||+|++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK--NVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEecccccCCCCCCCeeEEEee
Confidence 46789999999999999999874 4579999999999999999999888764 8999999999999888999999999
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
.+++++++...+++++.++|||||++++.++....... .......++.+++.++++++||++++...
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK-------------GPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-------------SCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc-------------CCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 99999999999999999999999999999876543210 00111245678999999999999988865
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 181 ~ 181 (219)
T 3dh0_A 181 V 181 (219)
T ss_dssp E
T ss_pred e
Confidence 4
No 17
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.88 E-value=7e-22 Score=171.86 Aligned_cols=162 Identities=16% Similarity=0.164 Sum_probs=129.7
Q ss_pred HHHHHhhc--CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 116 SQLFDNLR--GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 116 ~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
..+++.+. .++.+|||||||+|.++..+++..+.+++|+|+++.+++.|++++...++. ++++++.+|+++++++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRID-DHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCC-CceEEEECChhcCCCCCC
Confidence 34444443 467899999999999999998754679999999999999999999988875 589999999999999889
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc-hHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG-TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
+||+|++..+++++ +...+++++.++|||||++++.++...... ....++.. .........++.+++.++|+++
T Consensus 185 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~l~~a 259 (312)
T 3vc1_A 185 AVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQ----INAHFECNIHSRREYLRAMADN 259 (312)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHH----HHHHHTCCCCBHHHHHHHHHTT
T ss_pred CEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHH----HHhhhcCCCCCHHHHHHHHHHC
Confidence 99999999999999 699999999999999999999886554321 11111111 1111122467789999999999
Q ss_pred CCcEEEEeeec
Q 022248 273 GFSSVELGNAF 283 (300)
Q Consensus 273 Gf~~v~~~~~~ 283 (300)
||++++++...
T Consensus 260 Gf~~~~~~~~~ 270 (312)
T 3vc1_A 260 RLVPHTIVDLT 270 (312)
T ss_dssp TEEEEEEEECH
T ss_pred CCEEEEEEeCC
Confidence 99999888654
No 18
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.88 E-value=9.7e-22 Score=169.37 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=111.2
Q ss_pred CCCCeEEEECCCCChhHHHhH----h-CCCce--EEEEcCCHHHHHHHHHHHHHc-CCCCCCEEEEecccCcCC------
Q 022248 124 GKAKKVLEIGIGTGPNLKYYA----A-DTDVQ--VLGVDPNRKMEKYAQTAAVAA-GLPLTNFKFLQAVGEAIP------ 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~----~-~~~~~--~~giD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~d~~~~~------ 189 (300)
.++.+|||||||+|.++..++ . .+... ++|+|+|+.|++.|++++... ++...++.+..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 356799999999997665432 2 24554 499999999999999988653 332113345566666543
Q ss_pred CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHH
Q 022248 190 VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+++++||+|++..+++|++|+..++++++++|||||++++..... +..+...+..............+.+.+++.++|
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG--SSGWDKLWKKYGSRFPQDDLCQYITSDDLTQML 208 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT--TSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC--CccHHHHHHHHHHhccCCCcccCCCHHHHHHHH
Confidence 567899999999999999999999999999999999999987543 233333333332211111123456788999999
Q ss_pred HhcCCcEEEE
Q 022248 270 SEAGFSSVEL 279 (300)
Q Consensus 270 ~~aGf~~v~~ 279 (300)
+++||+.+..
T Consensus 209 ~~aGf~~~~~ 218 (292)
T 2aot_A 209 DNLGLKYECY 218 (292)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCceEEE
Confidence 9999998764
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.88 E-value=9.6e-22 Score=168.90 Aligned_cols=168 Identities=14% Similarity=0.142 Sum_probs=127.3
Q ss_pred HHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC
Q 022248 112 AGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV 190 (300)
Q Consensus 112 ~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 190 (300)
......+++.+. .++.+|||||||+|.++..+++..+.+++|+|+|+.+++.+++++...++. +++.++.+|+.+++
T Consensus 50 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~- 127 (287)
T 1kpg_A 50 IAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENL-RSKRVLLAGWEQFD- 127 (287)
T ss_dssp HHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCC-SCEEEEESCGGGCC-
T ss_pred HHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCC-CCeEEEECChhhCC-
Confidence 344555565554 567899999999999999998644669999999999999999999887764 58999999998776
Q ss_pred CCCcccEEEEcccccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchH-------HHHHHHhhhhhhh--hhcCCc
Q 022248 191 SDASVDAVVGTLVLCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTF-------LKFWQNVVDPLQQ--IVSDGC 259 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~ 259 (300)
++||+|++..+++|+ ++...+++++.++|||||++++.++........ ..........+.. ......
T Consensus 128 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRL 205 (287)
T ss_dssp --CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCC
T ss_pred --CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCC
Confidence 789999999999999 678999999999999999999988765432110 0000000000111 112345
Q ss_pred ccchHHHHHHHhcCCcEEEEeeec
Q 022248 260 HLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 260 ~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
.+.+++.++++++||+++++....
T Consensus 206 ~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 206 PSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp CCHHHHHHHHHTTTCEEEEEEECH
T ss_pred CCHHHHHHHHHhCCcEEEEEEeCc
Confidence 678999999999999999887543
No 20
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.88 E-value=1.3e-21 Score=174.70 Aligned_cols=155 Identities=26% Similarity=0.281 Sum_probs=122.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHc-----C-CCCCCEEEEecccCcC------C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAA-----G-LPLTNFKFLQAVGEAI------P 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~-----~-~~~~~~~~~~~d~~~~------~ 189 (300)
.++.+|||||||+|.++..+++. ++.+++|+|+++.+++.|+++++.. + +..+++.|+.+|++.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999874 5679999999999999999987654 3 3335899999999987 8
Q ss_pred CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHH
Q 022248 190 VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+++++||+|++..++++++++..+++++.++|||||+|++.+......... .... ............++.+++.++|
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSE--AAQQ-DPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCH--HHHH-CHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCH--hHhh-hHHHhhcccccCCCHHHHHHHH
Confidence 889999999999999999999999999999999999999988655432111 1111 1111111223456778999999
Q ss_pred HhcCCcEEEEee
Q 022248 270 SEAGFSSVELGN 281 (300)
Q Consensus 270 ~~aGf~~v~~~~ 281 (300)
+++||+.+++..
T Consensus 239 ~~aGF~~v~~~~ 250 (383)
T 4fsd_A 239 AEAGFRDVRLVS 250 (383)
T ss_dssp HHTTCCCEEEEE
T ss_pred HHCCCceEEEEe
Confidence 999999876653
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.88 E-value=4.8e-22 Score=168.61 Aligned_cols=161 Identities=14% Similarity=0.214 Sum_probs=128.4
Q ss_pred HHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 115 KSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 115 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
...+++.+. .++.+|||||||+|.++..+++..+.+++|+|+|+.+++.++++.... +++.++.+|+..++++++
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~ 119 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILTKEFPEN 119 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTTCCCCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccccCCCCCC
Confidence 344555544 467899999999999999998754779999999999999999875433 489999999999999899
Q ss_pred cccEEEEcccccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHh
Q 022248 194 SVDAVVGTLVLCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISE 271 (300)
Q Consensus 194 ~~D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+||+|++..+++|+ ++...+++++.++|||||++++.++...........+...... .+...++.+++.++|++
T Consensus 120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 195 (266)
T 3ujc_A 120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQ----RKYTLITVEEYADILTA 195 (266)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHH----HTCCCCCHHHHHHHHHH
T ss_pred cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhc----CCCCCCCHHHHHHHHHH
Confidence 99999999999999 8889999999999999999999987655422222222222211 22346778899999999
Q ss_pred cCCcEEEEeeec
Q 022248 272 AGFSSVELGNAF 283 (300)
Q Consensus 272 aGf~~v~~~~~~ 283 (300)
+||+++++....
T Consensus 196 ~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 196 CNFKNVVSKDLS 207 (266)
T ss_dssp TTCEEEEEEECH
T ss_pred cCCeEEEEEeCC
Confidence 999999887543
No 22
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.88 E-value=5.5e-22 Score=161.66 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=118.2
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
.+.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++. +++.++.+|+..+++++++||+|++..++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH-------PSVTFHHGTITDLSDSPKRWAGLLAWYSL 112 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGGGGGSCCCEEEEEEESSS
T ss_pred CCCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccccccCCCCeEEEEehhhH
Confidence 3789999999999999999875 669999999999999999872 47899999999999888999999999999
Q ss_pred cCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 205 CSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 205 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
+|++ +...+++++.++|||||++++..+.......+ .........++.+++.++|+++||+++++...
T Consensus 113 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 113 IHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPM----------YHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp TTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEE----------CCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhh----------hchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 9997 88999999999999999999988655431110 00011123467889999999999999998866
Q ss_pred cc
Q 022248 283 FL 284 (300)
Q Consensus 283 ~~ 284 (300)
..
T Consensus 183 ~~ 184 (203)
T 3h2b_A 183 PR 184 (203)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 23
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.88 E-value=1.7e-21 Score=160.29 Aligned_cols=150 Identities=21% Similarity=0.176 Sum_probs=113.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++. +.+++|+|+++.+++.+++ .+. .++.++.+|+..+ +++++||+|++..+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~--~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL--DNVEFRQQDLFDW-TPDRQWDAVFFAHW 116 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC--TTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC--CCeEEEecccccC-CCCCceeEEEEech
Confidence 45679999999999999999876 6799999999999999987 333 4899999999888 77899999999999
Q ss_pred ccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHH-hhhhhhhhh--------cCCcccchHHHHHHHhc
Q 022248 204 LCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQN-VVDPLQQIV--------SDGCHLTRQTGNNISEA 272 (300)
Q Consensus 204 l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~l~~a 272 (300)
++|+++. ..+++++.++|||||.+++.+...... .....+.. ......... ...+++.+++.++|+++
T Consensus 117 l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 195 (218)
T 3ou2_A 117 LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHER-RLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTAL 195 (218)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHT
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCcc-ccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHC
Confidence 9999885 789999999999999999999776322 22221111 011111100 12345788999999999
Q ss_pred CCcEEEEeee
Q 022248 273 GFSSVELGNA 282 (300)
Q Consensus 273 Gf~~v~~~~~ 282 (300)
||+++..+..
T Consensus 196 Gf~v~~~~~~ 205 (218)
T 3ou2_A 196 GWSCSVDEVH 205 (218)
T ss_dssp TEEEEEEEEE
T ss_pred CCEEEeeecc
Confidence 9995555543
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.87 E-value=1.6e-21 Score=163.63 Aligned_cols=152 Identities=16% Similarity=0.101 Sum_probs=118.1
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++.. .++.++++|++++ .++++||+|++..++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~v~~~~~d~~~~-~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLK------DGITYIHSRFEDA-QLPRRYDNIVLTHVL 113 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSC------SCEEEEESCGGGC-CCSSCEEEEEEESCG
T ss_pred CCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhh------CCeEEEEccHHHc-CcCCcccEEEEhhHH
Confidence 6779999999999999999864 4589999999999999998752 1789999999888 467899999999999
Q ss_pred cCcccHHHHHHHHH-HcccCCcEEEEEecccCCCchHHHHHHHhhhhh-------hhhhcCCcccchHHHHHHHhcCCcE
Q 022248 205 CSVKDVDMTLQEVR-RVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPL-------QQIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 205 ~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
+|++++..+++++. ++|||||++++.++...........+...+... ....+...++.+++.++|+++||++
T Consensus 114 ~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 114 EHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp GGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 99999999999999 999999999998865533211111111111100 0112234678899999999999999
Q ss_pred EEEeeecc
Q 022248 277 VELGNAFL 284 (300)
Q Consensus 277 v~~~~~~~ 284 (300)
+++.....
T Consensus 194 ~~~~~~~~ 201 (250)
T 2p7i_A 194 TYRSGIFF 201 (250)
T ss_dssp EEEEEEEE
T ss_pred EEEeeeEe
Confidence 99875444
No 25
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.87 E-value=1.5e-21 Score=163.39 Aligned_cols=146 Identities=19% Similarity=0.151 Sum_probs=118.7
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||||||+|.++..+++....+++|+|+++.+++.|++++...+. .++.++.+|+..+++++++||+|++..++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK--RVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG--GEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC--ceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 5789999999999999998876566999999999999999998765532 36899999999998888899999999999
Q ss_pred cCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 205 CSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 205 ~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
+++++. ..+++++.++|||||++++.++...... .+... ......+.+++.++|+++||+++++...
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV--------ILDDV---DSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE--------EEETT---TTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc--------eeccc---CCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 999874 4899999999999999999886554310 11111 1112346789999999999999998765
Q ss_pred c
Q 022248 283 F 283 (300)
Q Consensus 283 ~ 283 (300)
.
T Consensus 226 ~ 226 (241)
T 2ex4_A 226 E 226 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 26
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.87 E-value=1.2e-20 Score=155.59 Aligned_cols=145 Identities=21% Similarity=0.323 Sum_probs=115.3
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||||||+|.++..++.. +|+|+++.+++.++++ ++.++.+|+..+++++++||+|++..++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~~~~~fD~v~~~~~l 112 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR---------GVFVLKGTAENLPLKDESFDFALMVTTI 112 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT---------TCEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc---------CCEEEEcccccCCCCCCCeeEEEEcchH
Confidence 3789999999999999988753 9999999999999876 5788999999999888899999999999
Q ss_pred cCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeecc
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 284 (300)
++++++..+++++.++|+|||.+++...... .....+................++.+++.++|+++||+++++.....
T Consensus 113 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 190 (219)
T 1vlm_A 113 CFVDDPERALKEAYRILKKGGYLIVGIVDRE--SFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLF 190 (219)
T ss_dssp GGSSCHHHHHHHHHHHEEEEEEEEEEEECSS--SHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECC
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEeCCc--cHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccC
Confidence 9999999999999999999999999886543 22222222211111111123456889999999999999999886654
Q ss_pred C
Q 022248 285 S 285 (300)
Q Consensus 285 ~ 285 (300)
.
T Consensus 191 ~ 191 (219)
T 1vlm_A 191 K 191 (219)
T ss_dssp S
T ss_pred C
Confidence 4
No 27
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.87 E-value=2.8e-21 Score=167.54 Aligned_cols=160 Identities=18% Similarity=0.127 Sum_probs=123.5
Q ss_pred hhcCCCCeEEEECCCCChhHHHhH--hCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYA--ADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAV 198 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~--~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 198 (300)
....++.+|||||||+|.++..++ ..++.+++|+|+++.+++.|++++...++. .+++++++|+.+++++ ++||+|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA-GQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEEECCGGGCCCC-SCEEEE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECchhcCCcc-CCeEEE
Confidence 334678899999999999999985 356789999999999999999999877764 4699999999999887 999999
Q ss_pred EEcccccCcccHHH---HHHHHHHcccCCcEEEEEecccCCCch-------------HHHHHHHhhhhhhhhhcCCcccc
Q 022248 199 VGTLVLCSVKDVDM---TLQEVRRVLKPGGIYLFVEHVAAKDGT-------------FLKFWQNVVDPLQQIVSDGCHLT 262 (300)
Q Consensus 199 ~~~~~l~~~~~~~~---~l~~~~~~LkpgG~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
++..+++|+++... +++++.++|||||++++.+........ ........+..........+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTH 271 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCH
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCH
Confidence 99999999988765 799999999999999998865432110 00111111111111111134688
Q ss_pred hHHHHHHHhcCCcEEEEeee
Q 022248 263 RQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~~~~ 282 (300)
+++.++|+++||+++++...
T Consensus 272 ~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 272 AQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEEcc
Confidence 99999999999999998863
No 28
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.87 E-value=6.6e-21 Score=163.49 Aligned_cols=154 Identities=16% Similarity=0.158 Sum_probs=122.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||||||+|.++..+++. + +.+++|+|+++.+++.|++++...+. ++.++++|+.+++++ ++||+|++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~-~~fD~v~~~ 96 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY---DSEFLEGDATEIELN-DKYDIAICH 96 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS---EEEEEESCTTTCCCS-SCEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC---ceEEEEcchhhcCcC-CCeeEEEEC
Confidence 46789999999999999999874 3 47999999999999999999876653 799999999998874 699999999
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEeccc-----C---CCch-----HHHHHHHhhhhhhhhhcCCcccchHHHHH
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA-----A---KDGT-----FLKFWQNVVDPLQQIVSDGCHLTRQTGNN 268 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
.+++++++...+++++.++|||||++++.++.. . .+.. ....+...+..............+++.++
T Consensus 97 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (284)
T 3gu3_A 97 AFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIY 176 (284)
T ss_dssp SCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHH
T ss_pred ChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHH
Confidence 999999999999999999999999999998651 0 0010 02233333333333333445667799999
Q ss_pred HHhcCCcEEEEee
Q 022248 269 ISEAGFSSVELGN 281 (300)
Q Consensus 269 l~~aGf~~v~~~~ 281 (300)
|+++||+.|++..
T Consensus 177 l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 177 LSELGVKNIECRV 189 (284)
T ss_dssp HHHTTCEEEEEEE
T ss_pred HHHcCCCeEEEEE
Confidence 9999999998854
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.87 E-value=3.7e-21 Score=160.02 Aligned_cols=160 Identities=23% Similarity=0.227 Sum_probs=124.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCC---CCCEEEEecccCcCCCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLP---LTNFKFLQAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++....++. ..++.++.+|+..+++++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 47889999999999999999876 679999999999999999988766542 13689999999999988999999999
Q ss_pred cccccCcccHH---HHHHHHHHcccCCcEEEEEecccCCCchHHH-HHHHhhhhh---hh-----------hhcCCcccc
Q 022248 201 TLVLCSVKDVD---MTLQEVRRVLKPGGIYLFVEHVAAKDGTFLK-FWQNVVDPL---QQ-----------IVSDGCHLT 262 (300)
Q Consensus 201 ~~~l~~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~---~~-----------~~~~~~~~~ 262 (300)
..+++++++.. .+++++.++|||||++++.++.......... .....+... .. ......++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 99999998887 8999999999999999999876644322211 111111000 00 001135678
Q ss_pred hHHHHHHHhcCCcEEEEeeecc
Q 022248 263 RQTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~~~~~~ 284 (300)
+++.++|+++||+++++.....
T Consensus 188 ~~l~~ll~~aGf~~~~~~~~~~ 209 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDYFRVKEL 209 (235)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEEecce
Confidence 9999999999999999875433
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=2.1e-21 Score=159.17 Aligned_cols=149 Identities=21% Similarity=0.236 Sum_probs=118.9
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
.+..++..+ .++.+|||||||+|.++..+++. +.+++|+|+++.+++.++++. ++.++.+|+..++ .++
T Consensus 33 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~d~~~~~-~~~ 101 (211)
T 3e23_A 33 TLTKFLGEL-PAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL--------GRPVRTMLFHQLD-AID 101 (211)
T ss_dssp HHHHHHTTS-CTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH--------TSCCEECCGGGCC-CCS
T ss_pred HHHHHHHhc-CCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc--------CCceEEeeeccCC-CCC
Confidence 344444444 36789999999999999999875 669999999999999999886 4567889998888 789
Q ss_pred cccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHh
Q 022248 194 SVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISE 271 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+||+|++..++++++ +...+++++.++|||||++++.......... .... .....++.+++.++|++
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~l~~ 170 (211)
T 3e23_A 102 AYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR---------DKLA--RYYNYPSEEWLRARYAE 170 (211)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE---------CTTS--CEECCCCHHHHHHHHHH
T ss_pred cEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc---------cccc--hhccCCCHHHHHHHHHh
Confidence 999999999999998 7789999999999999999998754432211 0000 11235678899999999
Q ss_pred cC-CcEEEEeeecc
Q 022248 272 AG-FSSVELGNAFL 284 (300)
Q Consensus 272 aG-f~~v~~~~~~~ 284 (300)
+| |+++++.....
T Consensus 171 aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 171 AGTWASVAVESSEG 184 (211)
T ss_dssp HCCCSEEEEEEEEE
T ss_pred CCCcEEEEEEeccC
Confidence 99 99999876544
No 31
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.86 E-value=1.1e-21 Score=166.55 Aligned_cols=167 Identities=16% Similarity=0.073 Sum_probs=116.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCC---------------------------C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPL---------------------------T 176 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~---------------------------~ 176 (300)
.++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++++...... .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4678999999999988877665443479999999999999998765432100 1
Q ss_pred CEE-EEecccCcC-CC---CCCcccEEEEcccccCc----ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHh
Q 022248 177 NFK-FLQAVGEAI-PV---SDASVDAVVGTLVLCSV----KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNV 247 (300)
Q Consensus 177 ~~~-~~~~d~~~~-~~---~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 247 (300)
++. ++.+|+.+. |+ ..++||+|+++++++++ ++...++++++++|||||+|++.+...... .
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~-~-------- 204 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPS-Y-------- 204 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE-E--------
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcc-c--------
Confidence 243 888998773 43 35799999999999986 456789999999999999999987533210 0
Q ss_pred hhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeeccCC--ccc-ccceeeEEecC
Q 022248 248 VDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFLSN--ASL-ISPHVYGIAHK 300 (300)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~--~~~-~~~~~~~~~~k 300 (300)
...........++.+++.++|+++||+++++....-.. ... ..++++.+|+|
T Consensus 205 -~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K 259 (263)
T 2a14_A 205 -MVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARK 259 (263)
T ss_dssp -EETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEE
T ss_pred -eeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEe
Confidence 00001112234577899999999999999887653111 111 12456667765
No 32
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=5.2e-21 Score=163.71 Aligned_cols=152 Identities=21% Similarity=0.218 Sum_probs=120.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++ .+.+++|+|+|+.+++.++++. +++.++.+|++.+++ +++||+|++..+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v~~~~~ 126 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFRV-DKPLDAVFSNAM 126 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCCC-SSCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCCc-CCCcCEEEEcch
Confidence 4678999999999999999987 6779999999999999998874 478899999999887 589999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhh-----hhcCCcccchHHHHHHHhcCCcEEE
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQ-----IVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
+++++++..+++++.++|||||++++..+...........+...+..... .......+.+++.++|+++||+++.
T Consensus 127 l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 206 (279)
T 3ccf_A 127 LHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTY 206 (279)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEE
T ss_pred hhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999876543322333333322221110 0111355788999999999999988
Q ss_pred Eeeecc
Q 022248 279 LGNAFL 284 (300)
Q Consensus 279 ~~~~~~ 284 (300)
++....
T Consensus 207 ~~~~~~ 212 (279)
T 3ccf_A 207 AALFNR 212 (279)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 775543
No 33
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.86 E-value=2.3e-21 Score=161.68 Aligned_cols=154 Identities=14% Similarity=0.111 Sum_probs=122.8
Q ss_pred HHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 115 KSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 115 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
+..++.....++.+|||||||+|.++..+++ .+.+++|+|+++.+++.|++++...+.. .++.|+++|+..++ ++++
T Consensus 56 l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~-~~~~ 132 (235)
T 3lcc_A 56 IVHLVDTSSLPLGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKA-EYFSFVKEDVFTWR-PTEL 132 (235)
T ss_dssp HHHHHHTTCSCCEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGG-GGEEEECCCTTTCC-CSSC
T ss_pred HHHHHHhcCCCCCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCC-cceEEEECchhcCC-CCCC
Confidence 3444544444567999999999999999875 5779999999999999999988654332 47999999999887 4569
Q ss_pred ccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 195 VDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 195 ~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
||+|++..++++++ +...+++++.++|||||++++.+........ .....++.+++.++|+++
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~ 197 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG---------------GPPYKVDVSTFEEVLVPI 197 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS---------------CSSCCCCHHHHHHHHGGG
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC---------------CCCccCCHHHHHHHHHHc
Confidence 99999999999998 8889999999999999999998865432100 011235678999999999
Q ss_pred CCcEEEEeeeccCC
Q 022248 273 GFSSVELGNAFLSN 286 (300)
Q Consensus 273 Gf~~v~~~~~~~~~ 286 (300)
||++++++......
T Consensus 198 Gf~~~~~~~~~~~~ 211 (235)
T 3lcc_A 198 GFKAVSVEENPHAI 211 (235)
T ss_dssp TEEEEEEEECTTCC
T ss_pred CCeEEEEEecCCcc
Confidence 99999988665543
No 34
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.86 E-value=4.9e-21 Score=161.40 Aligned_cols=156 Identities=19% Similarity=0.179 Sum_probs=117.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++....+++|+|+++.+++.++++.. ..++.++.+|+..+++++++||+|++..+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAIEDIAIEPDAYNVVLSSLA 117 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC-----CTTEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc-----cCCeEEEEcchhhCCCCCCCeEEEEEchh
Confidence 3678999999999999999987644499999999999999998764 24899999999999988899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHH-H------------HHHhhhhh-------hhhhcCCcccch
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLK-F------------WQNVVDPL-------QQIVSDGCHLTR 263 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~------------~~~~~~~~-------~~~~~~~~~~~~ 263 (300)
++++++...+++++.++|||||++++............. | +..++... ........++.+
T Consensus 118 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 197 (253)
T 3g5l_A 118 LHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVT 197 (253)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHH
T ss_pred hhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHH
Confidence 999999999999999999999999997643210000000 0 00000000 000000112778
Q ss_pred HHHHHHHhcCCcEEEEeeecc
Q 022248 264 QTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 264 ~~~~~l~~aGf~~v~~~~~~~ 284 (300)
++.++|+++||+++++.....
T Consensus 198 ~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 198 TYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp HHHHHHHHTTEEEEEEECCCC
T ss_pred HHHHHHHHcCCeeeeeecCCC
Confidence 999999999999999986544
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.86 E-value=3e-21 Score=161.56 Aligned_cols=142 Identities=15% Similarity=0.180 Sum_probs=114.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~ 201 (300)
.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++ +.++.+|+.+. ++++++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK----------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT----------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh----------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 46789999999999999998875 66899999999999998764 67889998775 7888999999999
Q ss_pred ccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 202 LVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 202 ~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
.+++|++ +...+++++.++|||||++++..+.... ...+.... ....+...++.+++.++++++||+++++
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS---LYSLINFY----IDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS---HHHHHHHT----TSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch---hHHHHHHh----cCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 9999998 5589999999999999999998865432 22222211 1112334567789999999999999888
Q ss_pred eeec
Q 022248 280 GNAF 283 (300)
Q Consensus 280 ~~~~ 283 (300)
....
T Consensus 182 ~~~~ 185 (240)
T 3dli_A 182 EFFE 185 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7654
No 36
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=1.4e-21 Score=165.64 Aligned_cols=149 Identities=20% Similarity=0.254 Sum_probs=117.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++ .+.+++|+|+|+.+++.++++ .++.|+.+|++.+++++++||+|++..+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 103 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVH--------PQVEWFTGYAENLALPDKSVDGVISILA 103 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCC--------TTEEEECCCTTSCCSCTTCBSEEEEESC
T ss_pred CCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhc--------cCCEEEECchhhCCCCCCCEeEEEEcch
Confidence 4678999999999999999986 678999999999999887654 2799999999999999999999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
++|++++..+++++.++|| ||++++.++....... .+....+.......+..+.+.+++. +|+++||+.+++....
T Consensus 104 l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 104 IHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQR--IWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp GGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCC--CGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEECC
T ss_pred HhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHH--HHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEec
Confidence 9999999999999999999 9999998865432210 1111222222222233456677888 9999999998887654
Q ss_pred cC
Q 022248 284 LS 285 (300)
Q Consensus 284 ~~ 285 (300)
..
T Consensus 180 ~p 181 (261)
T 3ege_A 180 LP 181 (261)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 37
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.86 E-value=8.3e-21 Score=159.95 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=122.4
Q ss_pred HHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC
Q 022248 113 GYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 113 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 191 (300)
.+...++..+. .++.+|||||||+|.++..+++....+++++|+++.+++.+++++... .++.++.+|+..++++
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~ 155 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATLP 155 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCCC
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCCC
Confidence 33445555554 467899999999999999998754568999999999999999886443 3799999999999988
Q ss_pred CCcccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHH
Q 022248 192 DASVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+++||+|++..+++|++ +...+++++.++|||||++++.++........ . ........++.+++.++|
T Consensus 156 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL-------V---DKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE-------E---ETTTTEEEBCHHHHHHHH
T ss_pred CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce-------e---cccCCcccCCHHHHHHHH
Confidence 89999999999999994 57889999999999999999998643322110 0 001111245678999999
Q ss_pred HhcCCcEEEEeeec
Q 022248 270 SEAGFSSVELGNAF 283 (300)
Q Consensus 270 ~~aGf~~v~~~~~~ 283 (300)
+++||+++++....
T Consensus 226 ~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 226 NESGVRVVKEAFQE 239 (254)
T ss_dssp HHHTCCEEEEEECT
T ss_pred HHCCCEEEEeeecC
Confidence 99999999887653
No 38
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.85 E-value=1.9e-20 Score=156.78 Aligned_cols=180 Identities=12% Similarity=0.128 Sum_probs=129.1
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD 192 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 192 (300)
..+..++.....++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++....+. ++.++.+|+..++++
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~- 99 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL---KPRLACQDISNLNIN- 99 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC---CCEEECCCGGGCCCS-
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC---CeEEEecccccCCcc-
Confidence 3444444443346789999999999999999875 66999999999999999999877654 689999999998876
Q ss_pred CcccEEEEcc-cccCc---ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHh------------hh-------
Q 022248 193 ASVDAVVGTL-VLCSV---KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNV------------VD------- 249 (300)
Q Consensus 193 ~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~------------~~------- 249 (300)
++||+|++.. +++|+ .+...+++++.++|||||++++....... ....+... +.
T Consensus 100 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYK---LSQVLGNNDFNYDDDEVFYYWENQFEDDL 176 (246)
T ss_dssp CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH---HHTTTTTCCEEEEETTEEEEEEEEEETTE
T ss_pred CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHH---HHhhcCcceEEecCCcEEEEEecccCCce
Confidence 8899999998 99999 56788999999999999999986543210 00000000 00
Q ss_pred ----------------hhhhhhcCCcccchHHHHHHHhcCCcEEEEeeeccCCccc-ccceeeEEecC
Q 022248 250 ----------------PLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFLSNASL-ISPHVYGIAHK 300 (300)
Q Consensus 250 ----------------~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~-~~~~~~~~~~k 300 (300)
......+...++.+++.++|+++||+++++...+...+.. ..+.++.+++|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 177 VSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp EEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred EEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 0000001234578999999999999999987543332221 33556666665
No 39
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.85 E-value=2.8e-20 Score=157.50 Aligned_cols=152 Identities=24% Similarity=0.270 Sum_probs=117.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++. +.+++|+|+|+.+++.+++++ ... .+++.++.+|++.+++++++||+|++..+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-AGV--DRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-TTS--CTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-hcc--CCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 46789999999999999999875 679999999999999999887 222 25899999999999988899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCch---HHHHHHHhhhhhhhhh--cCCcccchHHHHHHHhcCCcEEE
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGT---FLKFWQNVVDPLQQIV--SDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
++++++...+++++.++|||||++++. +....... +...+........... ....++.+++.++|+++||+++.
T Consensus 114 l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 192 (263)
T 2yqz_A 114 WHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRT 192 (263)
T ss_dssp GGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred hhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcce
Confidence 999999999999999999999999998 32221112 2222332222111000 11245678999999999999776
Q ss_pred Ee
Q 022248 279 LG 280 (300)
Q Consensus 279 ~~ 280 (300)
+.
T Consensus 193 ~~ 194 (263)
T 2yqz_A 193 RE 194 (263)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 40
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.85 E-value=2.2e-21 Score=164.58 Aligned_cols=129 Identities=19% Similarity=0.250 Sum_probs=99.5
Q ss_pred HHHHHHHhhhhHhHHHHHHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCC
Q 022248 94 EFYASVMNSSMKSYEAEVAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGL 173 (300)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~ 173 (300)
++|...+......|..........+. ...+++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++.
T Consensus 20 ~~yd~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~----- 92 (263)
T 3pfg_A 20 ELYDLVHQGKGKDYHREAADLAALVR-RHSPKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRN----- 92 (263)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHH-HHCTTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHC-----
T ss_pred HHHHHHhhcCCCCHHHHHHHHHHHHH-hhCCCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhC-----
Confidence 34444433222344443333333333 33346789999999999999999865 569999999999999999874
Q ss_pred CCCCEEEEecccCcCCCCCCcccEEEEcc-cccCcc---cHHHHHHHHHHcccCCcEEEEEec
Q 022248 174 PLTNFKFLQAVGEAIPVSDASVDAVVGTL-VLCSVK---DVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 174 ~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.++.++++|+..+++ +++||+|++.. +++|++ +...+++++.++|||||++++..+
T Consensus 93 --~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 93 --PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp --TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred --CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 378999999999887 68999999998 999995 556789999999999999999653
No 41
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.85 E-value=4.2e-20 Score=160.97 Aligned_cols=166 Identities=15% Similarity=0.152 Sum_probs=126.4
Q ss_pred HHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC
Q 022248 113 GYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 113 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 191 (300)
.....+++.+. .++.+|||||||+|.++..+++..+.+++|+|+|+.+++.|++++...++. +++.++.+|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTN-RSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEEESCGGGCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECChHHCC--
Confidence 44455555554 567899999999999999998754679999999999999999999887764 57999999998875
Q ss_pred CCcccEEEEcccccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchHH------HHH-HHhhhhhhh--hhcCCcc
Q 022248 192 DASVDAVVGTLVLCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFL------KFW-QNVVDPLQQ--IVSDGCH 260 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~------~~~-~~~~~~~~~--~~~~~~~ 260 (300)
++||+|++..+++|+ ++...+++++.++|||||++++.++......... .+. ......+.. .......
T Consensus 154 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLP 232 (318)
T ss_dssp -CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCC
Confidence 789999999999999 6889999999999999999999987654421110 000 000011111 1123456
Q ss_pred cchHHHHHHHhcCCcEEEEeee
Q 022248 261 LTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 261 ~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
+.+++.++++++||++++++..
T Consensus 233 s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 233 STEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp CHHHHHHHHHHTTCBCCCCEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEec
Confidence 7899999999999998887654
No 42
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.84 E-value=6.6e-20 Score=156.36 Aligned_cols=171 Identities=12% Similarity=0.042 Sum_probs=127.4
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHH------HHHHHHHHHHHcCCCCCCEEEEecc
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRK------MEKYAQTAAVAAGLPLTNFKFLQAV 184 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~d 184 (300)
....+++.+. .++.+|||||||+|.++..+++. +..+++|+|+|+. +++.|++++...++. ++++++.+|
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~-~~v~~~~~d 109 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG-DRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG-GGEEEECSC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC-CceEEEECC
Confidence 3444555443 57789999999999999999874 3379999999997 999999999877763 589999998
Q ss_pred ---cCcCCCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHh----hhhhh---
Q 022248 185 ---GEAIPVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNV----VDPLQ--- 252 (300)
Q Consensus 185 ---~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~----~~~~~--- 252 (300)
...+++++++||+|++..+++|+++...+++.+.++++|||++++.+....... .....+... +....
T Consensus 110 ~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (275)
T 3bkx_A 110 NLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSD 189 (275)
T ss_dssp CTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCT
T ss_pred hhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccc
Confidence 456677889999999999999999998877777888888999999987654321 111111111 11110
Q ss_pred hhhcCCcccchHHHHHHHhcCCcEEEEeeeccC
Q 022248 253 QIVSDGCHLTRQTGNNISEAGFSSVELGNAFLS 285 (300)
Q Consensus 253 ~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 285 (300)
.......++.+++.++++++||++++++..+..
T Consensus 190 ~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~~~ 222 (275)
T 3bkx_A 190 VANIRTLITPDTLAQIAHDNTWTYTAGTIVEDP 222 (275)
T ss_dssp TCSCCCCCCHHHHHHHHHHHTCEEEECCCBCCT
T ss_pred cccccccCCHHHHHHHHHHCCCeeEEEEEecCC
Confidence 111123567889999999999999988876443
No 43
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.84 E-value=3e-20 Score=160.12 Aligned_cols=158 Identities=16% Similarity=0.169 Sum_probs=120.2
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC-CCCcccEEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV-SDASVDAVV 199 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~ 199 (300)
....++.+|||||||+|.++..+++....+++|+|+++.+++.|++++...++. .++.++++|+..+++ ++++||+|+
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 60 LYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRR-FKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp HHCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCS-SEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred HhCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCC-ccEEEEECCccccccCCCCCcCEEE
Confidence 334678899999999999999988765569999999999999999998877653 479999999999887 678999999
Q ss_pred EcccccC----cccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHH-h---------------hhh-hhh-----
Q 022248 200 GTLVLCS----VKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQN-V---------------VDP-LQQ----- 253 (300)
Q Consensus 200 ~~~~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~---------------~~~-~~~----- 253 (300)
+..++++ ..+...+++++.++|||||++++..+.... ....+.. . +.. ...
T Consensus 139 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (298)
T 1ri5_A 139 SQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV---ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFT 215 (298)
T ss_dssp EESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH---HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEE
T ss_pred ECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH---HHHHHccCccCCeeEEEEeCccccccccccceEEEE
Confidence 9999976 467788999999999999999998854321 1111110 0 000 000
Q ss_pred ------hhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 254 ------IVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 254 ------~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
.....+++.+++.++|+++||+++++...
T Consensus 216 l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 216 LLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp ETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred EchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 00012456789999999999999988643
No 44
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.84 E-value=1e-19 Score=147.42 Aligned_cols=140 Identities=21% Similarity=0.234 Sum_probs=115.7
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...++. ++.++.+|+..+++ +++||+|++..++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD--NLHTRVVDLNNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEECCGGGCCC-CCCEEEEEEESCG
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC--CcEEEEcchhhCCC-CCCceEEEEcchh
Confidence 5679999999999999999876 679999999999999999998887763 79999999999887 7899999999999
Q ss_pred cCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 205 CSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 205 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
++++ +...+++++.++|||||++++.+........ ........++.+++.++|++ |++++.+..
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP------------CTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC------------CCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC------------CCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 9987 7889999999999999999887754433210 00111235577899999976 999888654
No 45
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.84 E-value=3.8e-19 Score=158.07 Aligned_cols=159 Identities=14% Similarity=0.150 Sum_probs=125.1
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
.+++.+. .+..+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++. ++++|+.+|+. .+++. .
T Consensus 193 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~-~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 193 QVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLA-DRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTT-TCCCS-S
T ss_pred HHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcC-CceEEeccCCC-CCCCC-C
Confidence 3444433 4568999999999999999987 46779999999 99999999999888765 68999999997 45554 8
Q ss_pred ccEEEEcccccCcccHH--HHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 195 VDAVVGTLVLCSVKDVD--MTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
||+|++.++++++++.. .++++++++|+|||++++.+............+... .+........++.++|.++|+++
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~--~~~~~~~g~~~t~~e~~~ll~~a 346 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDL--LLLVLVGGAERSESEFAALLEKS 346 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHH--HHHHHHSCCCBCHHHHHHHHHTT
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhH--HHHhhcCCccCCHHHHHHHHHHC
Confidence 99999999999998775 799999999999999999987665543222111111 11112345567889999999999
Q ss_pred CCcEEEEee
Q 022248 273 GFSSVELGN 281 (300)
Q Consensus 273 Gf~~v~~~~ 281 (300)
||+++++..
T Consensus 347 Gf~~~~~~~ 355 (369)
T 3gwz_A 347 GLRVERSLP 355 (369)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999875
No 46
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=6e-21 Score=155.68 Aligned_cols=146 Identities=10% Similarity=0.042 Sum_probs=110.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcC----------CCCCCEEEEecccCcCCCCC-
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAG----------LPLTNFKFLQAVGEAIPVSD- 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~----------~~~~~~~~~~~d~~~~~~~~- 192 (300)
.++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++..... ....+++|+++|+.++++.+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 46789999999999999999875 6699999999999999998764210 00147999999999998765
Q ss_pred CcccEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 193 ASVDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
++||+|++..++++++. ...++++++++|||||+++++....... .... .....+.+++.+++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~------------~~~~--~~~~~~~~el~~~~~ 165 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA------------LLEG--PPFSVPQTWLHRVMS 165 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS------------SSSS--CCCCCCHHHHHHTSC
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc------------ccCC--CCCCCCHHHHHHHhc
Confidence 78999999999998864 4568999999999999955554322211 0000 011246789999998
Q ss_pred hcCCcEEEEeeeccC
Q 022248 271 EAGFSSVELGNAFLS 285 (300)
Q Consensus 271 ~aGf~~v~~~~~~~~ 285 (300)
+ ||+++.++.....
T Consensus 166 ~-gf~i~~~~~~~~~ 179 (203)
T 1pjz_A 166 G-NWEVTKVGGQDTL 179 (203)
T ss_dssp S-SEEEEEEEESSCT
T ss_pred C-CcEEEEeccccch
Confidence 8 9998888765543
No 47
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.84 E-value=2.7e-20 Score=157.72 Aligned_cols=167 Identities=15% Similarity=0.110 Sum_probs=120.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCC---------------------------C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPL---------------------------T 176 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~---------------------------~ 176 (300)
.++.+|||||||+|.++..++.....+++|+|+|+.+++.+++++...+... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 4568999999999999988876433489999999999999998875432100 0
Q ss_pred CE-EEEecccCcCC-CCC---CcccEEEEccccc----CcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHh
Q 022248 177 NF-KFLQAVGEAIP-VSD---ASVDAVVGTLVLC----SVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNV 247 (300)
Q Consensus 177 ~~-~~~~~d~~~~~-~~~---~~~D~v~~~~~l~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 247 (300)
++ .++.+|+...+ +++ ++||+|++..+++ ++++...+++++.++|||||+|++.+..... .
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~----------~ 204 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS----------Y 204 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC----------E
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc----------e
Confidence 27 89999998764 355 8999999999999 6678889999999999999999998843321 0
Q ss_pred hhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeeccCC--cc-cccceeeEEecC
Q 022248 248 VDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFLSN--AS-LISPHVYGIAHK 300 (300)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~--~~-~~~~~~~~~~~k 300 (300)
+............+.+++.++|+++||+++++....... .+ -....++.+++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K 260 (265)
T 2i62_A 205 YMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRK 260 (265)
T ss_dssp EEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEEC
T ss_pred EEcCCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEecc
Confidence 000011112234567799999999999999888654321 11 123456666666
No 48
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.84 E-value=5e-20 Score=150.94 Aligned_cols=144 Identities=25% Similarity=0.347 Sum_probs=112.6
Q ss_pred HHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 115 KSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 115 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
...++..+..++.+|||+|||+|.++..+ +. +++|+|+++.+++.++++. .++.++.+|+..++++++
T Consensus 26 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~ 94 (211)
T 2gs9_A 26 EERALKGLLPPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGEALPFPGE 94 (211)
T ss_dssp HHHHHHTTCCCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTTSCCSCSS
T ss_pred HHHHHHHhcCCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcccccCCCCCC
Confidence 33445555557889999999999998877 44 8999999999999999875 378999999999999889
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhh-hhhhhhcCCcccchHHHHHHHhc
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVD-PLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
+||+|++..+++|+++...+++++.++|||||.+++.++.... .+......... ......+...++.+++.++|+
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~-- 170 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS--PWAALYRRLGEKGVLPWAQARFLAREDLKALLG-- 170 (211)
T ss_dssp CEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS--HHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--
T ss_pred cEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC--cHHHHHHHHhhccCccccccccCCHHHHHHHhc--
Confidence 9999999999999999999999999999999999999865532 22222211111 111112345678999999998
Q ss_pred C
Q 022248 273 G 273 (300)
Q Consensus 273 G 273 (300)
|
T Consensus 171 G 171 (211)
T 2gs9_A 171 P 171 (211)
T ss_dssp S
T ss_pred C
Confidence 7
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=7.2e-20 Score=154.65 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=117.0
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
.++..+. .++.+|||||||+|.++..+++. ++.+++|+|+++.+++.++++. +++.++.+|++.++ ++++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~-~~~~ 95 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-------PNTNFGKADLATWK-PAQK 95 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-------TTSEEEECCTTTCC-CSSC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------CCcEEEECChhhcC-ccCC
Confidence 3444443 46789999999999999999874 4679999999999999998872 47899999999988 7889
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhh--hhh------hhcCCcccchHHH
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDP--LQQ------IVSDGCHLTRQTG 266 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~ 266 (300)
||+|++..+++++++...+++++.++|||||++++..+..... .....+...... ... .......+.+++.
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (259)
T 2p35_A 96 ADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYF 174 (259)
T ss_dssp EEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-HHHHHHHHHHHHSTTGGGC-------CCCCCHHHHH
T ss_pred cCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-HHHHHHHHHhcCcchHHHhccccccccCCCCHHHHH
Confidence 9999999999999999999999999999999999988644322 122222222111 100 1123456788999
Q ss_pred HHHHhcCCcEE
Q 022248 267 NNISEAGFSSV 277 (300)
Q Consensus 267 ~~l~~aGf~~v 277 (300)
++|+++||++.
T Consensus 175 ~~l~~aGf~v~ 185 (259)
T 2p35_A 175 NALSPKSSRVD 185 (259)
T ss_dssp HHHGGGEEEEE
T ss_pred HHHHhcCCceE
Confidence 99999999743
No 50
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.83 E-value=1e-19 Score=149.77 Aligned_cols=151 Identities=16% Similarity=0.102 Sum_probs=112.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCC---CCCEEEEecccCcCCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLP---LTNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++. +..+++|+|+++.+++.|++++...++. ..++.++.+|+...+.++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 36789999999999999999875 3469999999999999999998766653 1279999999988777778999999
Q ss_pred EcccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhh-hhhhhhhcCCcccchHHH----HHHHhc
Q 022248 200 GTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVV-DPLQQIVSDGCHLTRQTG----NNISEA 272 (300)
Q Consensus 200 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~l~~a 272 (300)
+..+++++++. ..+++++.++|||||++++..... ....+.... .......+...++.+++. ++++++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 182 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE-----YNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERF 182 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH-----HHHHTC-----------CCSCBCHHHHHHHHHHHHHHS
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc-----cchhhcccccccccccccccccCHHHHHHHHHHHHHHc
Confidence 99999999865 789999999999999777665311 111110000 001111122345777888 899999
Q ss_pred CCcEEEE
Q 022248 273 GFSSVEL 279 (300)
Q Consensus 273 Gf~~v~~ 279 (300)
||+++..
T Consensus 183 Gf~v~~~ 189 (217)
T 3jwh_A 183 AYNVQFQ 189 (217)
T ss_dssp SEEEEEC
T ss_pred CceEEEE
Confidence 9986554
No 51
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.83 E-value=1.2e-19 Score=146.38 Aligned_cols=152 Identities=16% Similarity=0.189 Sum_probs=121.1
Q ss_pred HHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccE
Q 022248 118 LFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 118 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
++..+..++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. .++.++.+|+..++++++.||+
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF-------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTTSCCCCCCEEE
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC-------CCCcEEEcccccCCCCCCceeE
Confidence 44444567889999999999999999875 679999999999999999874 3689999999998888889999
Q ss_pred EEEc-ccccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCC
Q 022248 198 VVGT-LVLCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGF 274 (300)
Q Consensus 198 v~~~-~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 274 (300)
|++. .+++++ ++...+++++.++|+|||.+++...... .++.+++.++++++||
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~-----------------------~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR-----------------------GWVFGDFLEVAERVGL 167 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS-----------------------SCCHHHHHHHHHHHTE
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC-----------------------CcCHHHHHHHHHHcCC
Confidence 9998 678877 4457899999999999999999764321 1345689999999999
Q ss_pred cEEEEeeeccCCccc-ccceeeEEecC
Q 022248 275 SSVELGNAFLSNASL-ISPHVYGIAHK 300 (300)
Q Consensus 275 ~~v~~~~~~~~~~~~-~~~~~~~~~~k 300 (300)
+++++....-...+. ..+++..+++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~v~~k 194 (195)
T 3cgg_A 168 ELENAFESWDLKPFVQGSEFLVAVFTK 194 (195)
T ss_dssp EEEEEESSTTCCBCCTTCSEEEEEEEE
T ss_pred EEeeeecccccCcCCCCCcEEEEEEec
Confidence 998887553333322 45666666655
No 52
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.83 E-value=9e-20 Score=156.78 Aligned_cols=150 Identities=13% Similarity=0.122 Sum_probs=109.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHc-----------------CCC-----------C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAA-----------------GLP-----------L 175 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~-----------------~~~-----------~ 175 (300)
.++.+|||||||+|.+...++...+.+|+|+|+|+.|++.|+++++.. +.. .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999654444445679999999999999998865321 100 0
Q ss_pred CCEEEEecccCc-CCC-----CCCcccEEEEcccccC----cccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHH
Q 022248 176 TNFKFLQAVGEA-IPV-----SDASVDAVVGTLVLCS----VKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQ 245 (300)
Q Consensus 176 ~~~~~~~~d~~~-~~~-----~~~~~D~v~~~~~l~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 245 (300)
..+.++.+|+.. +|+ ++++||+|++.+++++ ++++..+++++.++|||||+|++........
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~-------- 221 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESW-------- 221 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCE--------
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcce--------
Confidence 015677788877 553 3467999999999999 6788999999999999999999986332110
Q ss_pred HhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 246 NVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
+...........++.+++.++|+++||+++++....
T Consensus 222 --~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 222 --YLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp --EEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred --EEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 000001111235678899999999999999888665
No 53
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=5.3e-21 Score=161.19 Aligned_cols=104 Identities=24% Similarity=0.282 Sum_probs=91.8
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+.+.+|||||||+|.++..|++. +.+|+|+|+|+.|++.|++. +++.+++++++++++++++||+|++..
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~--------~~v~~~~~~~e~~~~~~~sfD~v~~~~ 107 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH--------PRVTYAVAPAEDTGLPPASVDVAIAAQ 107 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC--------TTEEEEECCTTCCCCCSSCEEEEEECS
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc--------CCceeehhhhhhhcccCCcccEEEEee
Confidence 345679999999999999999864 56999999999999887642 589999999999999999999999999
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
++|++ +...++++++|+|||||+|++..+....
T Consensus 108 ~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 108 AMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp CCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred ehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 99887 6788999999999999999998865543
No 54
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.83 E-value=1.3e-20 Score=162.86 Aligned_cols=168 Identities=14% Similarity=0.066 Sum_probs=119.9
Q ss_pred HHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCC-CCCEEEEecccCcCCCCCC
Q 022248 115 KSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLP-LTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 115 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~ 193 (300)
...+++.+..++.+|||||||+|.++..+++. +.+++|+|+++.+++.|++++...++. ..+++++++|+..+++ ++
T Consensus 72 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 149 (299)
T 3g2m_A 72 AREFATRTGPVSGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DK 149 (299)
T ss_dssp HHHHHHHHCCCCSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SC
T ss_pred HHHHHHhhCCCCCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CC
Confidence 34444555555669999999999999999875 679999999999999999998765420 0379999999999987 68
Q ss_pred cccEEEEc-ccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCC-----chHHHHH---HHhhhhhh----------
Q 022248 194 SVDAVVGT-LVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKD-----GTFLKFW---QNVVDPLQ---------- 252 (300)
Q Consensus 194 ~~D~v~~~-~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~---~~~~~~~~---------- 252 (300)
+||+|++. .++++++ +...+++++.++|||||+|++..+..... .....+. ...+....
T Consensus 150 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (299)
T 3g2m_A 150 RFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQE 229 (299)
T ss_dssp CEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEE
T ss_pred CcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEE
Confidence 99999975 5566665 35789999999999999999987654311 0000000 00000000
Q ss_pred ---------------hhhcCCcccchHHHHHHHhcCCcEEEEeeecc
Q 022248 253 ---------------QIVSDGCHLTRQTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 253 ---------------~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 284 (300)
......+++.+++.++|+++||+++++.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 230 ITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp EEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 00011245889999999999999999986653
No 55
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.83 E-value=8e-20 Score=151.02 Aligned_cols=149 Identities=21% Similarity=0.234 Sum_probs=111.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC---CCCC-CcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI---PVSD-ASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~~~~-~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++. +.+++|+|+++.+++.++++ .++.+..+++..+ ++.. ++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA--------GAGEVHLASYAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT--------CSSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh--------cccccchhhHHhhcccccccCCCccEEE
Confidence 46689999999999999999875 67999999999999999887 2567888888766 5444 4599999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchH--HHHHH-Hhhhhhh---hhhcCCcccchHHHHHHHhcC
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTF--LKFWQ-NVVDPLQ---QIVSDGCHLTRQTGNNISEAG 273 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~l~~aG 273 (300)
+..+++ ..+...+++++.++|||||++++.++........ ...+. ..+.... .......++.+++.++|+++|
T Consensus 122 ~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 122 ANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp EESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred ECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 999999 7899999999999999999999998755332110 00000 0000000 001112457899999999999
Q ss_pred CcEEEEeee
Q 022248 274 FSSVELGNA 282 (300)
Q Consensus 274 f~~v~~~~~ 282 (300)
|+++++...
T Consensus 201 f~~~~~~~~ 209 (227)
T 3e8s_A 201 LRLVSLQEP 209 (227)
T ss_dssp EEEEEEECC
T ss_pred CeEEEEecC
Confidence 999998763
No 56
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.83 E-value=1.2e-19 Score=149.52 Aligned_cols=152 Identities=16% Similarity=0.121 Sum_probs=112.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCC---CCEEEEecccCcCCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPL---TNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++.. ..+++|+|+++.+++.|++++...++.. .+++++.+|+...++.+++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 367899999999999999998743 3799999999999999999987665431 279999999988887788999999
Q ss_pred EcccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHH----HHHHhcC
Q 022248 200 GTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTG----NNISEAG 273 (300)
Q Consensus 200 ~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~aG 273 (300)
+..+++++++. ..+++++.++|||||.+++....... ..+..... .......+...++.+++. ++++++|
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~l~~~~G 183 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYN-FHYGNLFE---GNLRHRDHRFEWTRKEFQTWAVKVAEKYG 183 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGG-GCCCCT--------GGGCCTTSBCHHHHHHHHHHHHHHHT
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhh-hhhcccCc---ccccccCceeeecHHHHHHHHHHHHHHCC
Confidence 99999999865 68999999999999966665532211 00000000 001111122345777888 8899999
Q ss_pred CcEEEE
Q 022248 274 FSSVEL 279 (300)
Q Consensus 274 f~~v~~ 279 (300)
|++...
T Consensus 184 f~v~~~ 189 (219)
T 3jwg_A 184 YSVRFL 189 (219)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 975444
No 57
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.83 E-value=3.8e-20 Score=159.35 Aligned_cols=108 Identities=20% Similarity=0.321 Sum_probs=93.9
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCC--CCCEEEEecccCcCC---CCCCcccEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLP--LTNFKFLQAVGEAIP---VSDASVDAVV 199 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~--~~~~~~~~~d~~~~~---~~~~~~D~v~ 199 (300)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++....+.. ..++.+..+|+..++ +++++||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 6789999999999999999875 569999999999999999886543321 246889999998887 7889999999
Q ss_pred Ec-ccccCccc-------HHHHHHHHHHcccCCcEEEEEecc
Q 022248 200 GT-LVLCSVKD-------VDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 200 ~~-~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+. .+++|+++ ...+++++.++|||||++++..++
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98 89999999 889999999999999999998753
No 58
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.83 E-value=8.3e-20 Score=151.23 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=119.5
Q ss_pred HHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc--CCCCCCcc
Q 022248 118 LFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA--IPVSDASV 195 (300)
Q Consensus 118 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~ 195 (300)
+++.+..++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++. ..++.+|+.. .++++++|
T Consensus 25 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 25 LLKHIKKEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL---------DHVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp HHTTCCTTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS---------SEEEESCTTTCCCCSCTTCE
T ss_pred HHHHhccCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC---------CcEEEcchhhcCCCCCCCcc
Confidence 33444357789999999999999999876 689999999999999988652 3678889876 56778899
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhh----hhhhcCCcccchHHHHHHHh
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPL----QQIVSDGCHLTRQTGNNISE 271 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~ 271 (300)
|+|++..+++|++++..+++++.++|+|||++++..+...............+... ....+...++.+++.++|++
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 174 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLK 174 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHH
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHH
Confidence 99999999999999999999999999999999998865432211111111000000 00112245678999999999
Q ss_pred cCCcEEEEeeeccC
Q 022248 272 AGFSSVELGNAFLS 285 (300)
Q Consensus 272 aGf~~v~~~~~~~~ 285 (300)
+||+++++......
T Consensus 175 ~Gf~~~~~~~~~~~ 188 (230)
T 3cc8_A 175 AGYSISKVDRVYVD 188 (230)
T ss_dssp TTEEEEEEEEEECC
T ss_pred cCCeEEEEEecccC
Confidence 99999998876554
No 59
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.83 E-value=1.9e-20 Score=156.29 Aligned_cols=102 Identities=18% Similarity=0.282 Sum_probs=87.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc-
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL- 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~- 202 (300)
.++.+|||+|||+|.++..+++.. .+++|+|+++.+++.++++. +++.++.+|+..+++ +++||+|+|..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~~~~ 109 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVSMFS 109 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEECTT
T ss_pred CCCCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEEcCc
Confidence 577899999999999999998753 39999999999999998874 478999999998887 68899999654
Q ss_pred cccCcc---cHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 203 VLCSVK---DVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 203 ~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+++|+. +...+++++.++|||||++++.++..
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred hHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 888884 55789999999999999999976544
No 60
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.4e-19 Score=156.27 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=113.9
Q ss_pred cCCCCeEEEECCCCChhHHHhHh--CCCceEEEEcCCHHHHHHHHHHHHHc-CCCCCCEEEEecccCcCCCCC------C
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAA--DTDVQVLGVDPNRKMEKYAQTAAVAA-GLPLTNFKFLQAVGEAIPVSD------A 193 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~~~~giD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~d~~~~~~~~------~ 193 (300)
..++.+|||||||+|.++..+++ ..+.+++|+|+|+.+++.|++++... +. ..+++|+++|++++++.+ +
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT-YKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C-CTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC-CCceEEEEcCHHhCCccccccccCC
Confidence 35788999999999999999996 46889999999999999999998876 22 258999999999988777 8
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc---CCCchHHHHHHHhhhhhhhhhcCCc---ccchHHHH
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA---AKDGTFLKFWQNVVDPLQQIVSDGC---HLTRQTGN 267 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 267 (300)
+||+|++..+++++ ++..+++++.++|||||+|++.+... .........+........ ....+ ...+.+.+
T Consensus 113 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~w~~p~~~~~~~ 189 (299)
T 3g5t_A 113 KIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQ--GLGPYWEQPGRSRLRN 189 (299)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTT--TTGGGSCTTHHHHHHT
T ss_pred CeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcc--cccchhhchhhHHHHH
Confidence 99999999999999 99999999999999999999954332 222222233332221100 01112 23456788
Q ss_pred HHHhcCCc
Q 022248 268 NISEAGFS 275 (300)
Q Consensus 268 ~l~~aGf~ 275 (300)
.++++||.
T Consensus 190 ~l~~~gfp 197 (299)
T 3g5t_A 190 MLKDSHLD 197 (299)
T ss_dssp TTTTCCCC
T ss_pred hhhccCCC
Confidence 89999993
No 61
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.82 E-value=3.9e-19 Score=155.82 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=119.3
Q ss_pred CCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
+..+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++. ++++|..+|+. .+++. .||+|++.++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLS-GRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcC-cCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 457999999999999999987 46779999999 99999999999888775 68999999997 45554 8999999999
Q ss_pred ccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 204 LCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 204 l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
+|++++. ..++++++++|+|||++++.+........ ..+.... +........++.++|.++|+++||+.+++..
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~d~~---~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHA-GTGMDLR---MLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---C-CHHHHHH---HHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCc-cHHHHHH---HHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9999885 78999999999999999999876544310 0111110 1112344567889999999999999998875
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 321 ~ 321 (332)
T 3i53_A 321 I 321 (332)
T ss_dssp C
T ss_pred C
Confidence 4
No 62
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.82 E-value=1.4e-20 Score=157.13 Aligned_cols=149 Identities=15% Similarity=0.171 Sum_probs=108.8
Q ss_pred HHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCccc
Q 022248 119 FDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVD 196 (300)
Q Consensus 119 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D 196 (300)
.+.+..++.+|||||||+|..+..+++....+++|||+++.+++.|+++.+..+ .++.++.+|++.+ ++++++||
T Consensus 54 a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 54 AAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFD 130 (236)
T ss_dssp HHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEE
T ss_pred HHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeehHHhhcccccccCCc
Confidence 333446789999999999999999987666789999999999999999887765 3788899988654 57789999
Q ss_pred EEEE-----cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHh
Q 022248 197 AVVG-----TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISE 271 (300)
Q Consensus 197 ~v~~-----~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
.|++ ...++++.+...++++++|+|||||+|++.+.... .......+.... ....+.+...|.+
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~L~e 199 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW-----GELMKSKYSDIT------IMFEETQVPALLE 199 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH-----HHHTTTTCSCHH------HHHHHHTHHHHHH
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCc-----hhhhhhhhhhhh------hhhHHHHHHHHHH
Confidence 9985 45667778899999999999999999998642210 000000000000 0113466678889
Q ss_pred cCCcEEEEee
Q 022248 272 AGFSSVELGN 281 (300)
Q Consensus 272 aGf~~v~~~~ 281 (300)
+||+.+.++.
T Consensus 200 aGF~~~~i~~ 209 (236)
T 3orh_A 200 AGFRRENIRT 209 (236)
T ss_dssp HTCCGGGEEE
T ss_pred cCCeEEEEEE
Confidence 9999655543
No 63
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.82 E-value=1.8e-19 Score=159.80 Aligned_cols=157 Identities=15% Similarity=0.072 Sum_probs=121.5
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~ 200 (300)
....+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++. ++++|+.+|+.+. |++ ++||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGS-ERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTG-GGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcc-cceEEEEccccccCCCCC-CCcCEEEE
Confidence 3668999999999999999987 46789999999 99999999998877664 5899999999875 465 78999999
Q ss_pred cccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHH--H--HhhhhhhhhhcCCcccchHHHHHHHhcCC
Q 022248 201 TLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFW--Q--NVVDPLQQIVSDGCHLTRQTGNNISEAGF 274 (300)
Q Consensus 201 ~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 274 (300)
..++|++++. ..++++++++|||||++++.+............. . .....+........++.++|.++|+++||
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 9999998765 4789999999999999999997665543222111 0 00000111112345688999999999999
Q ss_pred cEEEEeeec
Q 022248 275 SSVELGNAF 283 (300)
Q Consensus 275 ~~v~~~~~~ 283 (300)
+++++....
T Consensus 335 ~~v~~~~~~ 343 (363)
T 3dp7_A 335 EVEEIQDNI 343 (363)
T ss_dssp EESCCCCCB
T ss_pred eEEEEEeCC
Confidence 998887543
No 64
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.82 E-value=2.7e-20 Score=155.68 Aligned_cols=154 Identities=21% Similarity=0.246 Sum_probs=115.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++....+++|+|+++.+++.++++... .++.++.+|+..+++++++||+|++..+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHLPQDSFDLAYSSLA 116 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccCCCCCceEEEEecc
Confidence 36789999999999999999876333999999999999999876532 3689999999998888899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHH-HHH-----------HHhhh-------hhhhhhcCCcccchH
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFL-KFW-----------QNVVD-------PLQQIVSDGCHLTRQ 264 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~-----------~~~~~-------~~~~~~~~~~~~~~~ 264 (300)
++++++...+++++.++|||||++++............ .|. ..++. ..........++.++
T Consensus 117 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 196 (243)
T 3bkw_A 117 LHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGT 196 (243)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHH
T ss_pred ccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHH
Confidence 99999999999999999999999999875321000000 000 00000 000000111246789
Q ss_pred HHHHHHhcCCcEEEEeee
Q 022248 265 TGNNISEAGFSSVELGNA 282 (300)
Q Consensus 265 ~~~~l~~aGf~~v~~~~~ 282 (300)
+.++|+++||+++++...
T Consensus 197 ~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 197 TLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHcCCEeeeeccC
Confidence 999999999999998764
No 65
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.82 E-value=7.7e-19 Score=155.57 Aligned_cols=162 Identities=14% Similarity=0.164 Sum_probs=123.1
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
.+++.+. .++.+|||||||+|.++..+++ .++.+++++|+ +.+++.|+++++..++. .+++++.+|+.+.++++.
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~- 257 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVA-DRMRGIAVDIYKESYPEA- 257 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCT-TTEEEEECCTTTSCCCCC-
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCC-CCEEEEeCccccCCCCCC-
Confidence 3444443 4678999999999999999987 45779999999 99999999999887764 469999999988876644
Q ss_pred ccEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccCCC--chHHHHHHHhhhhhh-hhhcCCcccchHHHHHH
Q 022248 195 VDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAKD--GTFLKFWQNVVDPLQ-QIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 269 (300)
|+|++..+++++++ ...++++++++|||||++++.+...... .....++ ..+.... ......+++.++|.++|
T Consensus 258 -D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~t~~e~~~ll 335 (359)
T 1x19_A 258 -DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLS-HYILGAGMPFSVLGFKEQARYKEIL 335 (359)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHH-HHGGGGGSSCCCCCCCCGGGHHHHH
T ss_pred -CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHH-HHHHhcCCCCcccCCCCHHHHHHHH
Confidence 99999999999987 6789999999999999999988655332 1122222 1111110 00011237889999999
Q ss_pred HhcCCcEEEEeeec
Q 022248 270 SEAGFSSVELGNAF 283 (300)
Q Consensus 270 ~~aGf~~v~~~~~~ 283 (300)
+++||+.+++....
T Consensus 336 ~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 336 ESLGYKDVTMVRKY 349 (359)
T ss_dssp HHHTCEEEEEEEET
T ss_pred HHCCCceEEEEecC
Confidence 99999999887653
No 66
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.82 E-value=3.9e-19 Score=155.89 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=121.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||||||+|.++..+++. ++.+++++|++ .+++.|++++...++. ++++++.+|+.+.+++++ ||+|++.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVA-SRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCG-GGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCC-cceEEEecccccCCCCCC-CcEEEEcc
Confidence 46689999999999999999874 56799999999 9999999998887764 479999999988776644 99999999
Q ss_pred cccCccc--HHHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 203 VLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 203 ~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
+++++++ ...+++++.++|+|||++++.+....... .....+.... ..........++.++|.++|+++||+.++
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~ll~~aGf~~~~ 319 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLV-MLATTPNGDAYTFAEYESMFSNAGFSHSQ 319 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHH-HHHHSSSCCCCCHHHHHHHHHHTTCSEEE
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHH-HHeeCCCCCcCCHHHHHHHHHHCCCCeee
Confidence 9999954 46899999999999999999987654321 1111111110 00111134567889999999999999998
Q ss_pred Eeeec
Q 022248 279 LGNAF 283 (300)
Q Consensus 279 ~~~~~ 283 (300)
+....
T Consensus 320 ~~~~~ 324 (335)
T 2r3s_A 320 LHSLP 324 (335)
T ss_dssp EECCT
T ss_pred EEECC
Confidence 87543
No 67
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=1.3e-19 Score=152.28 Aligned_cols=145 Identities=13% Similarity=0.040 Sum_probs=110.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHH----------cCC-----CCCCEEEEecccCcC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVA----------AGL-----PLTNFKFLQAVGEAI 188 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~----------~~~-----~~~~~~~~~~d~~~~ 188 (300)
.++.+|||+|||+|..+..|++. +.+|+|||+|+.+++.|+++... .+. ...+++|+++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 36789999999999999999875 66999999999999999876531 000 114799999999999
Q ss_pred CCCC-CcccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHH
Q 022248 189 PVSD-ASVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQT 265 (300)
Q Consensus 189 ~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
++.+ ++||+|++..++++++ +...+++++.++|||||+++++........ ... .....+.+++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~------------~~g--~~~~~~~~el 211 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK------------HAG--PPFYVPSAEL 211 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS------------CCC--SSCCCCHHHH
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc------------CCC--CCCCCCHHHH
Confidence 8764 8999999999998885 456789999999999999987654322110 000 0112567899
Q ss_pred HHHHHhcCCcEEEEeeecc
Q 022248 266 GNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 266 ~~~l~~aGf~~v~~~~~~~ 284 (300)
.++|.. +|+++.++....
T Consensus 212 ~~~l~~-~f~v~~~~~~~~ 229 (252)
T 2gb4_A 212 KRLFGT-KCSMQCLEEVDA 229 (252)
T ss_dssp HHHHTT-TEEEEEEEEEEC
T ss_pred HHHhhC-CeEEEEEecccc
Confidence 999977 599888875443
No 68
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.82 E-value=4.9e-19 Score=148.97 Aligned_cols=203 Identities=19% Similarity=0.253 Sum_probs=132.5
Q ss_pred CCchhHHHHHHHHHhhhhHhHHHHHHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHH
Q 022248 87 PRPDWYEEFYASVMNSSMKSYEAEVAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQ 165 (300)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~ 165 (300)
...++|+..|... ...+.. ...++..++.... .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+
T Consensus 7 ~~a~~yd~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~ 80 (252)
T 1wzn_A 7 LLAEYYDTIYRRR----IERVKA-EIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVAR 80 (252)
T ss_dssp TTGGGHHHHTHHH----HHTHHH-HHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhcc----hhhhHH-HHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHH
Confidence 4456666655432 122222 2234455555443 46789999999999999999875 679999999999999999
Q ss_pred HHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc-cccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchH--
Q 022248 166 TAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL-VLCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTF-- 240 (300)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-- 240 (300)
++....+. ++.++++|+..++++ ++||+|++.. .++++ .+...+++++.++|||||.+++..++.......
T Consensus 81 ~~~~~~~~---~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~ 156 (252)
T 1wzn_A 81 RKAKERNL---KIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGP 156 (252)
T ss_dssp HHHHHTTC---CCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CC
T ss_pred HHHHhcCC---ceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCC
Confidence 99887764 689999999988765 6899999864 33443 356789999999999999998754331100000
Q ss_pred --------------------HHHHHH--------hhhhhhhh------hcCCcccchHHHHHHHhcCCcEEEEeeeccCC
Q 022248 241 --------------------LKFWQN--------VVDPLQQI------VSDGCHLTRQTGNNISEAGFSSVELGNAFLSN 286 (300)
Q Consensus 241 --------------------~~~~~~--------~~~~~~~~------~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~ 286 (300)
...... ........ .....++.+++. +|.++||+.+++...+-..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~ 235 (252)
T 1wzn_A 157 VVWNEQKGEEKLVIMDWREVEPAVQKLRFKRLVQILRPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRE 235 (252)
T ss_dssp EEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSS
T ss_pred eeeeccCCCeeEEEEeecccccccceeeheeeeeecccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccc
Confidence 000000 00000000 011356778887 8999999999886544333
Q ss_pred cccccceeeEEecC
Q 022248 287 ASLISPHVYGIAHK 300 (300)
Q Consensus 287 ~~~~~~~~~~~~~k 300 (300)
.....+.++.+|+|
T Consensus 236 ~~~~~~r~~~va~k 249 (252)
T 1wzn_A 236 LSPNDMRYWIVGIA 249 (252)
T ss_dssp CCTTCCEEEEEEEC
T ss_pred cCCCCceEEEEEEe
Confidence 44445667777766
No 69
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.82 E-value=3.5e-20 Score=159.57 Aligned_cols=155 Identities=17% Similarity=0.170 Sum_probs=110.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCC----------------------------
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLP---------------------------- 174 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~---------------------------- 174 (300)
.++.+|||||||+|.++..+++. .+.+++|+|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 36789999999999999999875 5679999999999999999886543311
Q ss_pred ----------------------------CCCEEEEecccCcCC-----CCCCcccEEEEcccccCcc------cHHHHHH
Q 022248 175 ----------------------------LTNFKFLQAVGEAIP-----VSDASVDAVVGTLVLCSVK------DVDMTLQ 215 (300)
Q Consensus 175 ----------------------------~~~~~~~~~d~~~~~-----~~~~~~D~v~~~~~l~~~~------~~~~~l~ 215 (300)
..+++|+++|+...+ +.+++||+|+|..+++|+. +...+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 148999999997654 5678999999999997774 6678999
Q ss_pred HHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHh--cCCcEEEEeee
Q 022248 216 EVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISE--AGFSSVELGNA 282 (300)
Q Consensus 216 ~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGf~~v~~~~~ 282 (300)
+++++|||||+|++....... .. .................+.++++.++|.+ +||+.+++...
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~---y~-~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSS---YG-KRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHH---HH-TTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhCCCcEEEEecCCchh---hh-hhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999999996532210 00 00000011111111223446799999998 99998887654
No 70
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.82 E-value=3.3e-19 Score=149.11 Aligned_cols=168 Identities=25% Similarity=0.310 Sum_probs=121.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc-
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL- 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~- 202 (300)
.++.+|||+|||+|.++..+++. .+++|+|+++.+++.|+++....+ .++.++.+|+..++++ ++||+|++..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~ 105 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELELP-EPVDAITILCD 105 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCCCS-SCEEEEEECTT
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcCCC-CCcCEEEEeCC
Confidence 35689999999999999998865 799999999999999999987765 3789999999988876 8899999986
Q ss_pred cccCc---ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHH----------------HHhhhh--------h----
Q 022248 203 VLCSV---KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFW----------------QNVVDP--------L---- 251 (300)
Q Consensus 203 ~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~----------------~~~~~~--------~---- 251 (300)
+++|+ .+...+++++.++|||||++++..+.... ....+ ...... .
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYK---METLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFI 182 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHH---HHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHH---HHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEE
Confidence 88888 45678899999999999999986533210 00000 000000 0
Q ss_pred ---h-------hhhcCCcccchHHHHHHHhcCCcEEEEeeeccCCccc-ccceeeEEecC
Q 022248 252 ---Q-------QIVSDGCHLTRQTGNNISEAGFSSVELGNAFLSNASL-ISPHVYGIAHK 300 (300)
Q Consensus 252 ---~-------~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~-~~~~~~~~~~k 300 (300)
. .......++.+++.++|+++||+++++...+...+.. ..+.++.+++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 183 EGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp ECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred EcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 0 0001124678999999999999999987543332222 34556666665
No 71
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.82 E-value=4.5e-19 Score=156.66 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=122.0
Q ss_pred HHHHhhc-CC-CCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CCC
Q 022248 117 QLFDNLR-GK-AKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VSD 192 (300)
Q Consensus 117 ~~~~~~~-~~-~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 192 (300)
.+++.+. .+ +.+|||||||+|.++..+++ .+..+++++|+ +.+++.+++++...++. ++++++.+|+.+.+ +..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLG-GRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCG-GGEEEEECCTTCGGGGTT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCC-CceEEEeCCcccCcccCC
Confidence 3444433 34 78999999999999999987 46789999999 88999999998887764 57999999998875 234
Q ss_pred CcccEEEEcccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHHH
Q 022248 193 ASVDAVVGTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGNN 268 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
+.||+|++..++|++++. ..++++++++|||||++++.+....... .....+.... .+........++.++|.++
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~e~~~l 325 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLH-MMVNTNHGELHPTPWIAGV 325 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHH-HHHHSTTCCCCCHHHHHHH
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHH-HHhhCCCCCcCCHHHHHHH
Confidence 669999999999999865 7899999999999999999987654432 1111111111 1111113446788999999
Q ss_pred HHhcCCcEEEE
Q 022248 269 ISEAGFSSVEL 279 (300)
Q Consensus 269 l~~aGf~~v~~ 279 (300)
|+++||++++.
T Consensus 326 l~~aGf~~~~~ 336 (352)
T 3mcz_A 326 VRDAGLAVGER 336 (352)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCceeee
Confidence 99999999884
No 72
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.82 E-value=1.4e-19 Score=149.71 Aligned_cols=115 Identities=24% Similarity=0.325 Sum_probs=97.5
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
+...+.+.+ .++.+|||+|||+|.++..+++.. .+++|+|+++.+++.|+++....+ .+++++.+|+..++++++
T Consensus 28 ~~~~l~~~~-~~~~~vLDlG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 28 LEPLLMKYM-KKRGKVLDLACGVGGFSFLLEDYG-FEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHHSC-CSCCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCSCTT
T ss_pred HHHHHHHhc-CCCCeEEEEeccCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC---CCceEEECchhcCCCCCC
Confidence 333344333 357899999999999999988753 499999999999999999987765 479999999999888888
Q ss_pred cccEEEEccc--ccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 194 SVDAVVGTLV--LCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 194 ~~D~v~~~~~--l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+||+|++..+ +++..+...+++++.++|||||++++.+..
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9999999998 666678889999999999999999998764
No 73
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.81 E-value=4.8e-19 Score=144.06 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=113.3
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++ +|||||||+|.++..+++. +.+++|+|+++.+++.|+++....+. ++.++.+|+..+++++++||+|++....
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~~~~fD~v~~~~~~ 104 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV---KITTVQSNLADFDIVADAWEGIVSIFCH 104 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC---CEEEECCBTTTBSCCTTTCSEEEEECCC
T ss_pred CC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC---ceEEEEcChhhcCCCcCCccEEEEEhhc
Confidence 45 9999999999999998865 66999999999999999999887764 7899999999998888999999996543
Q ss_pred cCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeecc
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 284 (300)
.+..+...+++++.++|||||++++..+....... ...........++.+++.++|+ ||+++.++....
T Consensus 105 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~ 173 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY---------NTGGPKDLDLLPKLETLQSELP--SLNWLIANNLER 173 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG---------TSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC---------CCCCCCcceeecCHHHHHHHhc--CceEEEEEEEEe
Confidence 33356788999999999999999999876543210 0000011123577889999998 999988875443
No 74
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.81 E-value=1.3e-19 Score=143.41 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=111.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++... +++|+|+++.+++.++++ .++++++.+| +++++++||+|++..+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~v~~~~~d---~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-------FDSVITLSDP---KEIPDNSVDFILFANS 84 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-------CTTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-------CCCcEEEeCC---CCCCCCceEEEEEccc
Confidence 4677999999999999999987544 999999999999999987 1589999998 6777899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
++++++...+++++.++|||||++++.++........ . .....++.+++.++|+ ||++++.....
T Consensus 85 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIG--------P-----PLSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp STTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS--------S-----CGGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred hhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccC--------c-----hHhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 9999999999999999999999999998765432110 0 0112467789999998 99998887553
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.81 E-value=3.8e-20 Score=154.47 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=89.5
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEE
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVG 200 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~ 200 (300)
..++.+|||||||+|.++..+++....+++|+|+|+.|++.|+++.+..+ .++.++.+|++++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 45678999999999999999976555589999999999999999876655 4799999999988 888899999999
Q ss_pred -ccccc----CcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 201 -TLVLC----SVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 201 -~~~l~----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.+.+. +..+...++++++++|||||+|++.+.
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 55541 223345779999999999999999764
No 76
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.80 E-value=2.3e-18 Score=146.69 Aligned_cols=157 Identities=14% Similarity=0.094 Sum_probs=113.2
Q ss_pred HHHHHHHHhhc--CCCCeEEEECCCC---ChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC
Q 022248 113 GYKSQLFDNLR--GKAKKVLEIGIGT---GPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE 186 (300)
Q Consensus 113 ~~~~~~~~~~~--~~~~~vLDiGcG~---G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 186 (300)
.++.+++..+. .+..+|||||||+ |.++..+.+ .++.+|+++|+|+.|++.|++++... ++++|+.+|+.
T Consensus 63 ~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~ 138 (274)
T 2qe6_A 63 KVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVR 138 (274)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTT
T ss_pred HHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCC
Confidence 33444444443 2347999999999 987766654 46789999999999999999987432 48999999996
Q ss_pred cCC-----------CCCCcccEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhh
Q 022248 187 AIP-----------VSDASVDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQ 253 (300)
Q Consensus 187 ~~~-----------~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (300)
+.+ ++.++||+|++..++|++++ ...++++++++|+|||+|++.+..... ......+...+....
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~~~~~~~~~~~~~~~- 216 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-LPAQQKLARITRENL- 216 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-CHHHHHHHHHHHHHH-
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-hHHHHHHHHHHHhcC-
Confidence 531 22358999999999999987 789999999999999999999876532 111111222111111
Q ss_pred hhcCCcccchHHHHHHHhcCCcEEE
Q 022248 254 IVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
.....++.+++.++| .||++++
T Consensus 217 -~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 217 -GEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp -SCCCCBCHHHHHHTT--TTCEECT
T ss_pred -CCCccCCHHHHHHHh--CCCeEcc
Confidence 123456888999999 6998765
No 77
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=4.2e-19 Score=148.82 Aligned_cols=153 Identities=12% Similarity=0.163 Sum_probs=113.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-----CcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-----ASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~D~v 198 (300)
.++.+|||||||+|.++..+++... +++|+|+|+.+++.++++.. ..++.++++|+.+++... ..||+|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT-----AANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC-----CTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc-----ccCceEEECcccccccccccccccCccEE
Confidence 4678999999999999999987544 99999999999999998762 248999999998865321 249999
Q ss_pred EEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhh---hh----hhhhcCCcccchHHHHHH
Q 022248 199 VGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVD---PL----QQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 199 ~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~l 269 (300)
++..++++++ +...+++++.++|||||++++.++..........+...... .. ........++.+++.++|
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 9999999998 78899999999999999999998755432111111111000 00 011112345778999999
Q ss_pred HhcCCcEEEEeeecc
Q 022248 270 SEAGFSSVELGNAFL 284 (300)
Q Consensus 270 ~~aGf~~v~~~~~~~ 284 (300)
+||++++.....+
T Consensus 209 --aGf~~~~~~~~~~ 221 (245)
T 3ggd_A 209 --PDFEILSQGEGLF 221 (245)
T ss_dssp --TTEEEEEEECCBC
T ss_pred --CCCEEEecccccc
Confidence 9999988765544
No 78
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.80 E-value=1e-19 Score=164.38 Aligned_cols=160 Identities=18% Similarity=0.267 Sum_probs=117.9
Q ss_pred HHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC
Q 022248 112 AGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV 190 (300)
Q Consensus 112 ~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 190 (300)
......+++.+. .++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++ ++......|...+.+.+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 344455555554 46789999999999999999874 56999999999999999876 3221111233445556677
Q ss_pred CCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHH-hhhhhhhhhcCCcccchHHHHHH
Q 022248 191 SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQN-VVDPLQQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
++++||+|++.++++|++++..++++++++|||||++++..+... ..... .+.... ..+..+++.+++.+++
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~------~~~~~~~~~~~~-~~~~~~~s~~~l~~ll 240 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLG------DIVAKTSFDQIF-DEHFFLFSATSVQGMA 240 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHH------HHHHHTCGGGCS-TTCCEECCHHHHHHHH
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChH------Hhhhhcchhhhh-hhhhhcCCHHHHHHHH
Confidence 789999999999999999999999999999999999999764421 11111 111111 1233456788999999
Q ss_pred HhcCCcEEEEeeec
Q 022248 270 SEAGFSSVELGNAF 283 (300)
Q Consensus 270 ~~aGf~~v~~~~~~ 283 (300)
+++||++++++...
T Consensus 241 ~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 241 QRCGFELVDVQRLP 254 (416)
T ss_dssp HHTTEEEEEEEEEC
T ss_pred HHcCCEEEEEEEcc
Confidence 99999999988754
No 79
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.80 E-value=2.4e-18 Score=153.23 Aligned_cols=161 Identities=20% Similarity=0.255 Sum_probs=120.2
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
.+++.+. .++.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++. ++++|+.+|+.+ +++. .
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~-~~~~-~ 248 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLA-DRVTVAEGDFFK-PLPV-T 248 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEEEEECCTTS-CCSC-C
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCC-CceEEEeCCCCC-cCCC-C
Confidence 3444433 46789999999999999999874 5679999999 99999999999888764 589999999865 3443 4
Q ss_pred ccEEEEcccccCcccHH--HHHHHHHHcccCCcEEEEEec--ccCCCchHHHHHHHhhhh-hhhhhcCCcccchHHHHHH
Q 022248 195 VDAVVGTLVLCSVKDVD--MTLQEVRRVLKPGGIYLFVEH--VAAKDGTFLKFWQNVVDP-LQQIVSDGCHLTRQTGNNI 269 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 269 (300)
||+|++..+++++++.. .+++++.++|||||++++.+. ....... ..+...+.. +....+...++.++|.++|
T Consensus 249 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 249 ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD--RFFSTLLDLRMLTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC--cchhhhcchHHHHhCCCcCCCHHHHHHHH
Confidence 99999999999998774 899999999999999999987 4322211 111111111 1112234567889999999
Q ss_pred HhcCCcEEEEeeec
Q 022248 270 SEAGFSSVELGNAF 283 (300)
Q Consensus 270 ~~aGf~~v~~~~~~ 283 (300)
+++||+++++....
T Consensus 327 ~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 327 GSAGLALASERTSG 340 (374)
T ss_dssp HTTTEEEEEEEEEC
T ss_pred HHCCCceEEEEECC
Confidence 99999999887653
No 80
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.80 E-value=1.5e-18 Score=152.27 Aligned_cols=149 Identities=11% Similarity=0.138 Sum_probs=117.3
Q ss_pred CeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccccc
Q 022248 127 KKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVLC 205 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 205 (300)
.+|||||||+|.++..+++. ++.+++++|+ +.+++.|++++...++. ++++++.+|+.+ +++ +.||+|++..++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAG-ERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHT-TSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCC-CcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 89999999999999999874 5679999999 99999999987766543 589999999977 555 6799999999999
Q ss_pred CcccHH--HHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 206 SVKDVD--MTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 206 ~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
++++.. .++++++++|+|||++++.+....... ......... +........++.++|.++|+++||+.+++..
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVH---LFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHH---HHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhH---hHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 987765 899999999999999999987654322 111111110 1111234456889999999999999988875
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 322 ~ 322 (334)
T 2ip2_A 322 L 322 (334)
T ss_dssp E
T ss_pred C
Confidence 4
No 81
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.79 E-value=6.5e-18 Score=149.09 Aligned_cols=151 Identities=16% Similarity=0.138 Sum_probs=116.7
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||||||+|.++..+++ .+..+++..|. +.+++.|++.+...+. ++++|+.+|+.+.+.+ .+|+|++.+
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~--~rv~~~~gD~~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEE--EQIDFQEGDFFKDPLP--EADLYILAR 252 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--C--CSEEEEESCTTTSCCC--CCSEEEEES
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhccc--CceeeecCccccCCCC--CceEEEeee
Confidence 3567999999999999999987 57788999997 8899999887754442 6999999999876654 579999999
Q ss_pred cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCc---hHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEE
Q 022248 203 VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDG---TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSV 277 (300)
Q Consensus 203 ~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 277 (300)
++|+++|. ..+|+++++.|+|||++++.+....++. ....+..- .+.....+..++.++|+++|+++||+.+
T Consensus 253 vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl---~ml~~~~g~ert~~e~~~ll~~AGf~~v 329 (353)
T 4a6d_A 253 VLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSL---NMLVQTEGQERTPTHYHMLLSSAGFRDF 329 (353)
T ss_dssp SGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHH---HHHHSSSCCCCCHHHHHHHHHHHTCEEE
T ss_pred ecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHH---HHHHhCCCcCCCHHHHHHHHHHCCCceE
Confidence 99999876 4689999999999999999997654432 12221110 1111223456788999999999999999
Q ss_pred EEeee
Q 022248 278 ELGNA 282 (300)
Q Consensus 278 ~~~~~ 282 (300)
++...
T Consensus 330 ~v~~~ 334 (353)
T 4a6d_A 330 QFKKT 334 (353)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 98754
No 82
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.79 E-value=8.3e-19 Score=143.31 Aligned_cols=154 Identities=17% Similarity=0.154 Sum_probs=115.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..++...+.+++|+|+|+.+++.+++++...+ .++.++.+|+..+++++++||+|++..+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECchhhCCCCCCceeEEEEcCh
Confidence 4678999999999998555444467799999999999999999987765 3688999999999988899999999999
Q ss_pred ccCc--ccHHHHHHHHHHcccCCcEEEEEecccCCCchHH--HHHHHhhhhhhh--hhcCCcccchHHHHHHHhcCCcEE
Q 022248 204 LCSV--KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFL--KFWQNVVDPLQQ--IVSDGCHLTRQTGNNISEAGFSSV 277 (300)
Q Consensus 204 l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGf~~v 277 (300)
++|+ .+...+++++.++|||||++++.++......... ......+..... .....+++.+++.++|.++||...
T Consensus 99 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 99 IFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred HHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 9999 6778999999999999999999887653321000 000000000000 011135677899999999999866
Q ss_pred EEe
Q 022248 278 ELG 280 (300)
Q Consensus 278 ~~~ 280 (300)
+..
T Consensus 179 ~~~ 181 (209)
T 2p8j_A 179 EDR 181 (209)
T ss_dssp EEE
T ss_pred eee
Confidence 554
No 83
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.78 E-value=3.9e-18 Score=151.08 Aligned_cols=158 Identities=16% Similarity=0.159 Sum_probs=121.0
Q ss_pred HHHhhc-CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcc
Q 022248 118 LFDNLR-GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASV 195 (300)
Q Consensus 118 ~~~~~~-~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 195 (300)
+++.+. .++.+|||||||+|.++..+++ .+..+++++|+ +.+++.|++++...++. ++++++.+|+.+ +++. .|
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~-~~~~-~~ 250 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLS-DRVDVVEGDFFE-PLPR-KA 250 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCT-TTEEEEECCTTS-CCSS-CE
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCC-CceEEEeCCCCC-CCCC-Cc
Confidence 344443 4578999999999999999987 35679999999 99999999999888764 589999999865 3333 49
Q ss_pred cEEEEcccccCcccH--HHHHHHHHHcccCCcEEEEEecc-cCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 196 DAVVGTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHV-AAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 196 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
|+|++..+++++++. ..+++++.++|||||++++.+.. ..... ....+.... +....+...++.++|.++|+
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~e~~~ll~ 327 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLR---MLVFLGGALRTREKWDGLAA 327 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHH---HHHHHSCCCCBHHHHHHHHH
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHH---HhhhcCCcCCCHHHHHHHHH
Confidence 999999999999876 47999999999999999999876 32211 122211111 11112345678899999999
Q ss_pred hcCCcEEEEeee
Q 022248 271 EAGFSSVELGNA 282 (300)
Q Consensus 271 ~aGf~~v~~~~~ 282 (300)
++||+++++...
T Consensus 328 ~aGf~~~~~~~~ 339 (360)
T 1tw3_A 328 SAGLVVEEVRQL 339 (360)
T ss_dssp HTTEEEEEEEEE
T ss_pred HCCCeEEEEEeC
Confidence 999999988765
No 84
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.78 E-value=1.1e-19 Score=156.81 Aligned_cols=109 Identities=14% Similarity=0.214 Sum_probs=87.5
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCC----CCEEEEeccc------CcC--CCCC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPL----TNFKFLQAVG------EAI--PVSD 192 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~----~~~~~~~~d~------~~~--~~~~ 192 (300)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... -+++|.+.|+ +.+ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999987776666556799999999999999999987665310 0267878777 333 3567
Q ss_pred CcccEEEEcccccCc---ccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 193 ASVDAVVGTLVLCSV---KDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
++||+|+|.+++|++ .+...++++++++|||||++++..+.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 899999999999875 45678999999999999999998754
No 85
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.78 E-value=3.4e-18 Score=137.08 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=93.2
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CCC
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VSD 192 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 192 (300)
+...++.....++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++++..++ ++++++..+.+.++ +.+
T Consensus 11 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~~~~~l~~~~~ 87 (185)
T 3mti_A 11 MSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI--ENTELILDGHENLDHYVR 87 (185)
T ss_dssp HHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC--CCEEEEESCGGGGGGTCC
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC--CcEEEEeCcHHHHHhhcc
Confidence 344455555567899999999999999999976 78999999999999999999998887 48999998887753 457
Q ss_pred CcccEEEEcc-cccC--------cccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 193 ASVDAVVGTL-VLCS--------VKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 193 ~~~D~v~~~~-~l~~--------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
++||+|++.. .+.+ ..+...+++++.++|||||++++..+...
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 8899999863 2221 13445788999999999999999886543
No 86
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.78 E-value=1.8e-18 Score=147.09 Aligned_cols=161 Identities=25% Similarity=0.434 Sum_probs=111.6
Q ss_pred cccCCCchhhhhhhh--cccCCcccCCCCCCCCCCCChHHHHhhcCCCCchhHHHHHHHHHhhhhHhHHHHHHHHHHHHH
Q 022248 42 SCCCGSRRHFIQGAS--TALFPLVYSSTPSSASSPSDSMAMLNRLHPPRPDWYEEFYASVMNSSMKSYEAEVAGYKSQLF 119 (300)
Q Consensus 42 ~~~c~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (300)
.+.|.++|.++.... +++++. .....+.+.+..++...+. .++.... |.. +...+..++
T Consensus 18 ~~~C~~~~~~~~~~~Gy~~~~~~----~~~~~~~~~~~~~~~~~~~------------~~~~~~~--~~~-~~~~~~~~~ 78 (269)
T 1p91_A 18 SYICPQRHQFDMAKEGYVNLLPV----QHKRSRDPGDSAEMMQARR------------AFLDAGH--YQP-LRDAIVAQL 78 (269)
T ss_dssp EEECTTCCEEEBCTTSCEECSCS----SSSCSCCCSSSHHHHHHHH------------HHHTTTT--THH-HHHHHHHHH
T ss_pred EEECCCCCcCCcCCCEEEEeecc----cccCCCCCCCCHHHHHHHH------------HHHhCCC--cHH-HHHHHHHHH
Confidence 578987777665444 455544 3333334555555554321 1111111 222 112222222
Q ss_pred Hh-hcCCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccE
Q 022248 120 DN-LRGKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 120 ~~-~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
.. +..++.+|||||||+|.++..+++. ++.+++|+|+++.+++.|+++. .++.+..+|+..+++++++||+
T Consensus 79 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~ 151 (269)
T 1p91_A 79 RERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASSHRLPFSDTSMDA 151 (269)
T ss_dssp HHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTSCSBCTTCEEE
T ss_pred HHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcchhhCCCCCCceeE
Confidence 22 2256789999999999999999875 4679999999999999998863 4788999999999988899999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
|++.++.. .++++.++|||||++++..+...
T Consensus 152 v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 152 IIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 99977644 36999999999999999986543
No 87
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.78 E-value=3e-18 Score=145.02 Aligned_cols=155 Identities=19% Similarity=0.297 Sum_probs=111.4
Q ss_pred HHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcc
Q 022248 116 SQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASV 195 (300)
Q Consensus 116 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 195 (300)
..++.....++.+|||||||+|.++..+++. +.+++|+|+|+.+++.++++.. . .++.+|+..+++++++|
T Consensus 45 ~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-------~-~~~~~d~~~~~~~~~~f 115 (260)
T 2avn_A 45 GSFLEEYLKNPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-------K-NVVEAKAEDLPFPSGAF 115 (260)
T ss_dssp HHHHHHHCCSCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-------S-CEEECCTTSCCSCTTCE
T ss_pred HHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-------C-CEEECcHHHCCCCCCCE
Confidence 3344443347789999999999999999865 6799999999999999988742 1 27899999999888999
Q ss_pred cEEEEcccccCc-ccHHHHHHHHHHcccCCcEEEEEecccCCC-------chHHHHHHHhhhhhhhh-------hcCCcc
Q 022248 196 DAVVGTLVLCSV-KDVDMTLQEVRRVLKPGGIYLFVEHVAAKD-------GTFLKFWQNVVDPLQQI-------VSDGCH 260 (300)
Q Consensus 196 D~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-------~~~~~~ 260 (300)
|+|++..++.++ ++...+++++.++|||||++++..++.... ..+ ............. ....++
T Consensus 116 D~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (260)
T 2avn_A 116 EAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAW-DQITRFLKTQTTSVGTTLFSFNSYAF 194 (260)
T ss_dssp EEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCH-HHHHHHHHHCEEEEECSSEEEEEECB
T ss_pred EEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhH-HHHHHHHhccccccCCCceeEEEecc
Confidence 999998876665 788999999999999999999987654210 000 0000001000000 001256
Q ss_pred cchHHHHHHHhcCCcEEEEeeec
Q 022248 261 LTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 261 ~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
+.+++.++ +||+++++....
T Consensus 195 ~~~~l~~l---aGf~~~~~~~~~ 214 (260)
T 2avn_A 195 KPEDLDSL---EGFETVDIRGIG 214 (260)
T ss_dssp CGGGGSSC---TTEEEEEEEEEC
T ss_pred CHHHHHHh---cCceEEEEECCC
Confidence 77788777 999998887544
No 88
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.78 E-value=8.2e-18 Score=144.25 Aligned_cols=157 Identities=17% Similarity=0.189 Sum_probs=120.6
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...++ ++.++.+|+..+++ +++||+|++..++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL---NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred CCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC---ceEEEEeccccccc-cCCccEEEEccch
Confidence 6789999999999999999876 66999999999999999999988775 79999999998877 7899999999999
Q ss_pred cCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 205 CSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 205 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
++++ +...+++++.++|+|||+++++.......... .......++.+++.+++.. |+++..+..
T Consensus 195 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC------------PLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC------------SSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC------------CCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 9984 45689999999999999988876544332110 0111235567788888854 998887543
Q ss_pred ccC-------CcccccceeeEEecC
Q 022248 283 FLS-------NASLISPHVYGIAHK 300 (300)
Q Consensus 283 ~~~-------~~~~~~~~~~~~~~k 300 (300)
... ......+++.-+|+|
T Consensus 261 ~~~~~~~~~~g~~~~~~~~~l~arK 285 (286)
T 3m70_A 261 MGELHKTDENGNRIKMKFATMLARK 285 (286)
T ss_dssp EEEEEEECSSCCEEEEEEEEEEEEC
T ss_pred CCeeeeccCCCCEEEEEEEEEEEec
Confidence 211 112233566677776
No 89
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.78 E-value=6.3e-18 Score=150.06 Aligned_cols=148 Identities=13% Similarity=0.092 Sum_probs=112.0
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||||||+|.++..+++ .+..+++++|+ +.+++.+++. ++++|+.+|+.+ +++++ |+|++.+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~p~~--D~v~~~~ 269 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDMFD-GVPKG--DAIFIKW 269 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCCCC-CCCCC--CEEEEec
Confidence 3568999999999999999987 46789999999 8888776542 489999999986 66644 9999999
Q ss_pred cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhh-hh-hhhcCCcccchHHHHHHHhcCCcE
Q 022248 203 VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDP-LQ-QIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 203 ~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
++|++++. ..+|++++++|||||++++.+....... ............ +. .......++.++|.++|+++||+.
T Consensus 270 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 270 ICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp CGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCee
Confidence 99999765 4789999999999999999987654332 111111111111 11 112445678899999999999999
Q ss_pred EEEeeec
Q 022248 277 VELGNAF 283 (300)
Q Consensus 277 v~~~~~~ 283 (300)
+++....
T Consensus 350 v~~~~~~ 356 (368)
T 3reo_A 350 FKVASCA 356 (368)
T ss_dssp EEEEEEE
T ss_pred eEEEEeC
Confidence 9987654
No 90
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.78 E-value=2.3e-18 Score=151.88 Aligned_cols=155 Identities=16% Similarity=0.092 Sum_probs=112.9
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
.+++.+. .++.+|||||||+|.++..+++ .+..+++++|+ +.++. +++.+..++. ++++|+.+|+. .+++ +
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~-~~v~~~~~d~~-~~~p--~ 247 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVA-GRWKVVEGDFL-REVP--H 247 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGT-TSEEEEECCTT-TCCC--C
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCC-CCeEEEecCCC-CCCC--C
Confidence 3444443 4578999999999999999987 46778999999 44444 2222222332 57999999996 3444 8
Q ss_pred ccEEEEcccccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCc--hHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 195 VDAVVGTLVLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDG--TFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
||+|++.+++|++++. ..++++++++|||||++++.+....... ......... +........++.++|.++|+
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~---~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFM---MLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHH---HHHTTSCCCCBHHHHHHHHH
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChh---hhhcCCCcCCCHHHHHHHHH
Confidence 9999999999999887 6899999999999999999987554432 111121111 11113345678899999999
Q ss_pred hcCCcEEEEee
Q 022248 271 EAGFSSVELGN 281 (300)
Q Consensus 271 ~aGf~~v~~~~ 281 (300)
++||+++++..
T Consensus 325 ~aGf~~~~~~~ 335 (348)
T 3lst_A 325 AAGLRLDRVVG 335 (348)
T ss_dssp HTTEEEEEEEE
T ss_pred HCCCceEEEEE
Confidence 99999999876
No 91
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.78 E-value=1.1e-17 Score=148.32 Aligned_cols=148 Identities=15% Similarity=0.117 Sum_probs=112.2
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||||||+|.++..+++ .+..+++++|+ +.+++.|++. ++++|+.+|+.+ +++.+ |+|++.+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~D~~~-~~p~~--D~v~~~~ 267 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF--------PGVTHVGGDMFK-EVPSG--DTILMKW 267 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc--------CCeEEEeCCcCC-CCCCC--CEEEehH
Confidence 3568999999999999999987 46789999999 8888776542 589999999987 77654 9999999
Q ss_pred cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCch--HHHHHHHhhhh-hh-hhhcCCcccchHHHHHHHhcCCcE
Q 022248 203 VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGT--FLKFWQNVVDP-LQ-QIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 203 ~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
++|++++. ..+|++++++|||||++++.+........ ........... +. .......++.++|.++|+++||+.
T Consensus 268 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~ 347 (364)
T 3p9c_A 268 ILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTG 347 (364)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCE
T ss_pred HhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCce
Confidence 99999654 57899999999999999999876544321 11111111111 11 112345678899999999999999
Q ss_pred EEEeeec
Q 022248 277 VELGNAF 283 (300)
Q Consensus 277 v~~~~~~ 283 (300)
+++....
T Consensus 348 v~~~~~~ 354 (364)
T 3p9c_A 348 VKSTYIY 354 (364)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 9987653
No 92
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.77 E-value=2.2e-17 Score=134.46 Aligned_cols=126 Identities=13% Similarity=0.100 Sum_probs=103.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|+++++..++ ++++++.+|+.+.....+.||+|++..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA--RNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC--TTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 46789999999999999999874 457999999999999999999988886 489999999866543447899999988
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
.++ +...+++++.++|||||++++...... ..+++.+.++++|| .+++.
T Consensus 117 ~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------------------~~~~~~~~l~~~g~-~~~~~ 165 (204)
T 3e05_A 117 SGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD-------------------------TLTKAVEFLEDHGY-MVEVA 165 (204)
T ss_dssp CTT---CHHHHHHHHHHHCCTTCEEEEEECBHH-------------------------HHHHHHHHHHHTTC-EEEEE
T ss_pred CCc---CHHHHHHHHHHhcCCCeEEEEEecccc-------------------------cHHHHHHHHHHCCC-ceeEE
Confidence 765 778899999999999999999764321 12377788999999 44443
No 93
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.77 E-value=7.2e-18 Score=150.00 Aligned_cols=147 Identities=17% Similarity=0.186 Sum_probs=111.8
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||||||+|.++..+++ .+..+++++|+ +.+++.|++. ++++++.+|+.+ +++. ||+|++..
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~~~--~D~v~~~~ 275 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL--------SGIEHVGGDMFA-SVPQ--GDAMILKA 275 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCCC--EEEEEEES
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc--------CCCEEEeCCccc-CCCC--CCEEEEec
Confidence 3568999999999999999987 45678999999 8888877642 479999999977 6653 99999999
Q ss_pred cccCcccHH--HHHHHHHHcccCCcEEEEEecccCCCch--HHHHHHHhhhh-hhhhhcCCcccchHHHHHHHhcCCcEE
Q 022248 203 VLCSVKDVD--MTLQEVRRVLKPGGIYLFVEHVAAKDGT--FLKFWQNVVDP-LQQIVSDGCHLTRQTGNNISEAGFSSV 277 (300)
Q Consensus 203 ~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~aGf~~v 277 (300)
++|++++.. .++++++++|||||++++.+........ ........+.. +........++.++|.++|+++||+.+
T Consensus 276 ~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 355 (372)
T 1fp1_D 276 VCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKF 355 (372)
T ss_dssp SGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceE
Confidence 999998887 8999999999999999999865543321 10001111111 111123456688999999999999999
Q ss_pred EEeee
Q 022248 278 ELGNA 282 (300)
Q Consensus 278 ~~~~~ 282 (300)
++...
T Consensus 356 ~~~~~ 360 (372)
T 1fp1_D 356 QVACR 360 (372)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 88764
No 94
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.76 E-value=4.2e-17 Score=132.87 Aligned_cols=145 Identities=13% Similarity=0.062 Sum_probs=111.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++++..++. ++++++.+|+.+.....+.||+|++...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLS-PRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 46789999999999999999987 789999999999999999999988874 4899999999884323467999998764
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeeec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNAF 283 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 283 (300)
+ +.. +++++.++|||||++++...... ...++.+.+++.||+++.+....
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~~~~~-------------------------~~~~~~~~l~~~g~~i~~i~~~~ 181 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANAVTLE-------------------------SETLLTQLHARHGGQLLRIDIAQ 181 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEECSHH-------------------------HHHHHHHHHHHHCSEEEEEEEEE
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEecCcc-------------------------cHHHHHHHHHhCCCcEEEEEeec
Confidence 4 455 89999999999999999774321 01267788889999877765322
Q ss_pred cC------CcccccceeeEEecC
Q 022248 284 LS------NASLISPHVYGIAHK 300 (300)
Q Consensus 284 ~~------~~~~~~~~~~~~~~k 300 (300)
.. ......|.+.-.++|
T Consensus 182 ~~~~~~~~~~~~~~Pv~i~~~~~ 204 (204)
T 3njr_A 182 AEPLGRMRGWSASRPQLQWSGQR 204 (204)
T ss_dssp EEEETTEEEECCCCCEEEEEEEC
T ss_pred ccccCccceeecCCCEEEEEecC
Confidence 21 122355666655554
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.76 E-value=1.3e-17 Score=141.40 Aligned_cols=102 Identities=10% Similarity=0.147 Sum_probs=89.4
Q ss_pred CCCCeEEEECCCCChhH-HHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNL-KYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~-~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||||||+|.++ ..+++..+.+|+|+|+++.+++.|+++++..++ ++++|+++|+.+++ +++||+|++..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl--~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV--DGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC--CSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC--CCeEEEECchhhCC--CCCcCEEEECC
Confidence 57899999999999766 445555788999999999999999999998887 59999999998876 68999999865
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
. .++...+++++.++|||||+|++.+.
T Consensus 197 ~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 197 L---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp T---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred C---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 4 57889999999999999999999763
No 96
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.76 E-value=1.2e-17 Score=147.40 Aligned_cols=147 Identities=15% Similarity=0.202 Sum_probs=111.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||||||+|.++..+++. ++.+++++|+ +.+++.|++. ++++|+.+|+.+ +++ .||+|++.+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS--------NNLTYVGGDMFT-SIP--NADAVLLKY 254 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB--------TTEEEEECCTTT-CCC--CCSEEEEES
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC--------CCcEEEeccccC-CCC--CccEEEeeh
Confidence 45689999999999999999874 6779999999 9998887642 369999999966 555 399999999
Q ss_pred cccCcccHH--HHHHHHHHcccC---CcEEEEEecccCCCchH--HHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCc
Q 022248 203 VLCSVKDVD--MTLQEVRRVLKP---GGIYLFVEHVAAKDGTF--LKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFS 275 (300)
Q Consensus 203 ~l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 275 (300)
++|++++.. .++++++++||| ||++++.+......... .......+...........++.++|.++|+++||+
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~ 334 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQ 334 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCC
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCC
Confidence 999998877 899999999999 99999998765443211 01111111110000123456789999999999999
Q ss_pred EEEEeee
Q 022248 276 SVELGNA 282 (300)
Q Consensus 276 ~v~~~~~ 282 (300)
.+++...
T Consensus 335 ~~~~~~~ 341 (352)
T 1fp2_A 335 HYKISPL 341 (352)
T ss_dssp EEEEEEE
T ss_pred eeEEEec
Confidence 9988763
No 97
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.76 E-value=8.9e-18 Score=136.89 Aligned_cols=133 Identities=16% Similarity=0.088 Sum_probs=108.9
Q ss_pred HHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEE
Q 022248 119 FDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAV 198 (300)
Q Consensus 119 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 198 (300)
+.....++.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++...++. +++++.+|+... .+++||+|
T Consensus 54 l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~--~~~~fD~i 129 (205)
T 3grz_A 54 IERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY--DIALQKTSLLAD--VDGKFDLI 129 (205)
T ss_dssp HHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC--CCEEEESSTTTT--CCSCEEEE
T ss_pred HHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEecccccc--CCCCceEE
Confidence 33334577899999999999999988765669999999999999999999888864 599999998764 35899999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
++...+++ ...+++++.++|+|||++++.+.... ..+++.++++++||+.++
T Consensus 130 ~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~-------------------------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 130 VANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL-------------------------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp EEESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG-------------------------GHHHHHHHHHHTTEEEEE
T ss_pred EECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc-------------------------cHHHHHHHHHHcCCceEE
Confidence 99876654 46789999999999999999764332 124788999999999988
Q ss_pred Eeeec
Q 022248 279 LGNAF 283 (300)
Q Consensus 279 ~~~~~ 283 (300)
+....
T Consensus 182 ~~~~~ 186 (205)
T 3grz_A 182 KMRAG 186 (205)
T ss_dssp EEEET
T ss_pred eeccC
Confidence 77543
No 98
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.76 E-value=2.9e-18 Score=142.08 Aligned_cols=128 Identities=16% Similarity=0.263 Sum_probs=103.4
Q ss_pred HHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc-CcCCCC-C
Q 022248 115 KSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG-EAIPVS-D 192 (300)
Q Consensus 115 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~ 192 (300)
...++..+..++.+|||||||+|.++..+++. +.+++|+|+++.+++.++++ .++++++++|+ +.+|++ +
T Consensus 38 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~d~~~~~~~~~~ 109 (226)
T 3m33_A 38 FDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN-------APHADVYEWNGKGELPAGLG 109 (226)
T ss_dssp HHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH-------CTTSEEEECCSCSSCCTTCC
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh-------CCCceEEEcchhhccCCcCC
Confidence 33444444457889999999999999999876 67999999999999999987 14799999999 668887 8
Q ss_pred CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 193 ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
++||+|++. .+...+++++.++|||||+++... ...+.+++.+.+.++
T Consensus 110 ~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~--------------------------~~~~~~~~~~~l~~~ 157 (226)
T 3m33_A 110 APFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG--------------------------PRLNVPEVPERLAAV 157 (226)
T ss_dssp CCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE--------------------------SSSCCTHHHHHHHHT
T ss_pred CCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC--------------------------CcCCHHHHHHHHHHC
Confidence 999999987 355667899999999999999111 123445889999999
Q ss_pred CCcEEEEeee
Q 022248 273 GFSSVELGNA 282 (300)
Q Consensus 273 Gf~~v~~~~~ 282 (300)
||+.+.+...
T Consensus 158 Gf~~~~~~~~ 167 (226)
T 3m33_A 158 GWDIVAEDHV 167 (226)
T ss_dssp TCEEEEEEEE
T ss_pred CCeEEEEEee
Confidence 9998877644
No 99
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.75 E-value=6e-18 Score=139.00 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=91.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++.... +++.++++|+.+++ ++++||+|++..+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~-~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW----SHISWAATDILQFS-TAELFDLIVVAEV 123 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC----SSEEEEECCTTTCC-CSCCEEEEEEESC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC----CCeEEEEcchhhCC-CCCCccEEEEccH
Confidence 45689999999999999999875 469999999999999999887543 37999999999988 6789999999999
Q ss_pred ccCcccH---HHHHHHHHHcccCCcEEEEEecc
Q 022248 204 LCSVKDV---DMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 204 l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
++|++++ ..+++++.++|||||++++....
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999887 46799999999999999998753
No 100
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.75 E-value=5.4e-17 Score=133.20 Aligned_cols=106 Identities=22% Similarity=0.331 Sum_probs=90.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~ 200 (300)
.++.+|||||||+|.++..+++. ++.+++|+|+++.+++.|++++...++ +++.++.+|+..++ +++++||+|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV--PNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--SSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC--CCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 46789999999999999999874 577999999999999999999988887 48999999998876 77889999999
Q ss_pred cccccCcc--------cHHHHHHHHHHcccCCcEEEEEe
Q 022248 201 TLVLCSVK--------DVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 201 ~~~l~~~~--------~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++...+.. ....+++++.++|+|||.+++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 86544322 12578999999999999999976
No 101
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.75 E-value=5e-17 Score=141.18 Aligned_cols=111 Identities=18% Similarity=0.193 Sum_probs=92.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCC-----CCCCEEEEecccCcCC----CC--C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGL-----PLTNFKFLQAVGEAIP----VS--D 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~~d~~~~~----~~--~ 192 (300)
.++.+|||+|||+|.++..+++....+++|+|+++.+++.++++....+. ...++.++++|++.++ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 36789999999999999999876677999999999999999998865421 1137899999998876 53 4
Q ss_pred CcccEEEEcccccCc----ccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 193 ASVDAVVGTLVLCSV----KDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
++||+|++.+++|++ ++...+++++.++|||||++++..+..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 589999999999887 345689999999999999999987643
No 102
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.74 E-value=7.3e-18 Score=138.41 Aligned_cols=113 Identities=24% Similarity=0.241 Sum_probs=95.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..++ .+++|+|+++. ++.++.+|+..+++++++||+|++..+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 466899999999999988773 58999999986 346788999999888899999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
+++ .+...+++++.++|+|||++++.+.... ..+.+++.++|+++||+++....
T Consensus 125 l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~-----------------------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 125 LMG-TNIRDFLEEANRVLKPGGLLKVAEVSSR-----------------------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp CCS-SCHHHHHHHHHHHEEEEEEEEEEECGGG-----------------------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred ccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCC-----------------------CCCHHHHHHHHHHCCCEEEEEec
Confidence 975 8899999999999999999999875421 12556999999999999887653
No 103
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.74 E-value=4.2e-18 Score=140.87 Aligned_cols=153 Identities=19% Similarity=0.255 Sum_probs=98.8
Q ss_pred hcCCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCC-HHHHHHH---HHHHHHcCCCCCCEEEEecccCcCCCCCCccc
Q 022248 122 LRGKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPN-RKMEKYA---QTAAVAAGLPLTNFKFLQAVGEAIPVSDASVD 196 (300)
Q Consensus 122 ~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 196 (300)
...++.+|||||||+|.++..+++ .++.+|+|+|+| +.|++.| ++++...++ .++.|+.+|++.+|. ..+|
T Consensus 21 ~~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--~~v~~~~~d~~~l~~--~~~d 96 (225)
T 3p2e_A 21 IGQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL--SNVVFVIAAAESLPF--ELKN 96 (225)
T ss_dssp HTTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC--SSEEEECCBTTBCCG--GGTT
T ss_pred hCCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--CCeEEEEcCHHHhhh--hccC
Confidence 345778999999999999999985 467899999999 7777776 766666665 489999999998863 2334
Q ss_pred EEEEcccccCcc--------cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHH
Q 022248 197 AVVGTLVLCSVK--------DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNN 268 (300)
Q Consensus 197 ~v~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
.|.+..+...++ +...++++++|+|||||++++........... .......... ...+...+++.++
T Consensus 97 ~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~el~~~ 171 (225)
T 3p2e_A 97 IADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEA-EIKKRGLPLL----SKAYFLSEQYKAE 171 (225)
T ss_dssp CEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC---------------C----CHHHHHSHHHHHH
T ss_pred eEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhc-hhhhcCCCCC----ChhhcchHHHHHH
Confidence 444433332222 23467999999999999999944222111000 0000000000 0011122359999
Q ss_pred HHhcCCcEEEEeeec
Q 022248 269 ISEAGFSSVELGNAF 283 (300)
Q Consensus 269 l~~aGf~~v~~~~~~ 283 (300)
++++||+++.++...
T Consensus 172 l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 172 LSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCCeeeeeecC
Confidence 999999988887544
No 104
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.74 E-value=3.9e-17 Score=136.50 Aligned_cols=131 Identities=17% Similarity=0.161 Sum_probs=106.5
Q ss_pred CCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC---CCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS---DASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~ 200 (300)
++.+|||||||+|.++..++. .++.+++|+|+++.+++.|+++++..++. +++++.+|++++++. +++||+|++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE--NTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEEeccHHHhcccccccCCccEEEE
Confidence 578999999999999999886 46779999999999999999999888874 799999999887754 678999999
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
.. +.+...+++++.++|||||++++...... . .. .+++.+.++++||+.++..
T Consensus 148 ~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~--~---~~------------------~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 148 RA----VARLSVLSELCLPLVKKNGLFVALKAASA--E---EE------------------LNAGKKAITTLGGELENIH 200 (240)
T ss_dssp EC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C--H---HH------------------HHHHHHHHHHTTEEEEEEE
T ss_pred ec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc--h---HH------------------HHHHHHHHHHcCCeEeEEE
Confidence 66 46788999999999999999998642110 0 00 1267788899999988876
Q ss_pred eecc
Q 022248 281 NAFL 284 (300)
Q Consensus 281 ~~~~ 284 (300)
....
T Consensus 201 ~~~~ 204 (240)
T 1xdz_A 201 SFKL 204 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5543
No 105
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.73 E-value=3.8e-17 Score=132.24 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=94.7
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CCCCcccE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VSDASVDA 197 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 197 (300)
....++.+|||+|||+|.++..+++. +..+++|+|+++.+++.|+++++..++. ++++++.+|+..++ +.+++||+
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI-DRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG-GGEEEECSCGGGGGGTCCSCEEE
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECCHHHHhhhccCCceE
Confidence 33457789999999999999999875 4569999999999999999999988763 58999999998875 56689999
Q ss_pred EEEccccc---------CcccHHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 198 VVGTLVLC---------SVKDVDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 198 v~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
|++...+. ...+...+++++.++|||||++++..+....
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 144 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGD 144 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTT
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCC
Confidence 99876441 1124467999999999999999998865443
No 106
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.73 E-value=6.7e-17 Score=132.60 Aligned_cols=106 Identities=18% Similarity=0.220 Sum_probs=90.0
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~ 200 (300)
.++.+|||||||+|.++..+++ .++.+++|+|+++.+++.|++++...++ +++.++.+|+..++ +++++||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~--~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA--QNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC--SSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC--CCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 3678999999999999999987 4678999999999999999999988886 48999999998875 67889999998
Q ss_pred cccccCccc--------HHHHHHHHHHcccCCcEEEEEe
Q 022248 201 TLVLCSVKD--------VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 201 ~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.+...+... ...+++++.++|||||.+++..
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 664433221 2578999999999999999976
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.73 E-value=4.1e-18 Score=139.60 Aligned_cols=113 Identities=22% Similarity=0.240 Sum_probs=94.5
Q ss_pred HHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccE
Q 022248 118 LFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 118 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
++.....++.+|||+|||+|.++..+++....+++|+|+++.+++.++++... .+++.++.+|+..+++++++||+
T Consensus 35 ~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~ 110 (215)
T 2pxx_A 35 LLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH----VPQLRWETMDVRKLDFPSASFDV 110 (215)
T ss_dssp HHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT----CTTCEEEECCTTSCCSCSSCEEE
T ss_pred HHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc----CCCcEEEEcchhcCCCCCCcccE
Confidence 33333457889999999999999999875434899999999999999988653 14789999999998888899999
Q ss_pred EEEcccccCcc---------------cHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 198 VVGTLVLCSVK---------------DVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 198 v~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|++..+++++. +...+++++.++|||||++++.++..
T Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 99988876543 56789999999999999999988543
No 108
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.73 E-value=6e-17 Score=135.84 Aligned_cols=162 Identities=15% Similarity=0.104 Sum_probs=113.3
Q ss_pred HHHHHHHHHHhhc--CCCCeEEEECCCC--ChhHHHhHh--CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc
Q 022248 111 VAGYKSQLFDNLR--GKAKKVLEIGIGT--GPNLKYYAA--DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV 184 (300)
Q Consensus 111 ~~~~~~~~~~~~~--~~~~~vLDiGcG~--G~~~~~l~~--~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d 184 (300)
-..++.+.+..+. ....+|||||||+ +..+..+++ .++.+|+++|.|+.|++.|++++...+ ..++.|+++|
T Consensus 62 nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD 139 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEAD 139 (277)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECC
T ss_pred HHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEec
Confidence 3445555555554 2346899999997 445555554 478899999999999999999875432 2479999999
Q ss_pred cCcCC------CCCCccc-----EEEEcccccCccc---HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhh
Q 022248 185 GEAIP------VSDASVD-----AVVGTLVLCSVKD---VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDP 250 (300)
Q Consensus 185 ~~~~~------~~~~~~D-----~v~~~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 250 (300)
+.+++ ...+.|| .|+++.+|||+++ +..+++++.+.|+|||+|++.+............+...+..
T Consensus 140 ~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~ 219 (277)
T 3giw_A 140 MLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA 219 (277)
T ss_dssp TTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh
Confidence 98752 1124465 6889999999987 56899999999999999999987654332222233322222
Q ss_pred hhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 251 LQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
... ....++.+++...|. ||++++
T Consensus 220 ~g~--p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 220 RNM--PMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp TTC--CCCCCCHHHHHHTTT--TSEECT
T ss_pred cCC--CCccCCHHHHHHHhC--CCcccC
Confidence 111 123567899999994 999644
No 109
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=1.1e-16 Score=128.73 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=94.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..++.....+++|+|+++.+++.|+++++..++ ++++++++|+.+++ +++++||+|++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~i~~~ 120 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL--SGATLRRGAVAAVVAAGTTSPVDLVLAD 120 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC--SCEEEEESCHHHHHHHCCSSCCSEEEEC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC--CceEEEEccHHHHHhhccCCCccEEEEC
Confidence 46789999999999999988776666899999999999999999998887 48999999998763 446899999998
Q ss_pred ccccCc-ccHHHHHHHHHH--cccCCcEEEEEeccc
Q 022248 202 LVLCSV-KDVDMTLQEVRR--VLKPGGIYLFVEHVA 234 (300)
Q Consensus 202 ~~l~~~-~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 234 (300)
...++. ++...++.++.+ +|+|||++++.....
T Consensus 121 ~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 121 PPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 877765 677889999999 999999999977543
No 110
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.72 E-value=7.4e-17 Score=142.74 Aligned_cols=146 Identities=18% Similarity=0.167 Sum_probs=111.5
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ . ++++++.+|+.+ +++ .||+|++.++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--~~v~~~~~d~~~-~~~--~~D~v~~~~v 260 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N--ENLNFVGGDMFK-SIP--SADAVLLKWV 260 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C--SSEEEEECCTTT-CCC--CCSEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C--CCcEEEeCccCC-CCC--CceEEEEccc
Confidence 5679999999999999999874 5679999999 788877654 1 469999999987 665 4999999999
Q ss_pred ccCcccHH--HHHHHHHHcccC---CcEEEEEecccCCCchH--HHHHHHhhhh-hhhhhcCCcccchHHHHHHHhcCCc
Q 022248 204 LCSVKDVD--MTLQEVRRVLKP---GGIYLFVEHVAAKDGTF--LKFWQNVVDP-LQQIVSDGCHLTRQTGNNISEAGFS 275 (300)
Q Consensus 204 l~~~~~~~--~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~aGf~ 275 (300)
+|++++.. .++++++++|+| ||++++.+......... .......+.. +........++.++|.++|+++||+
T Consensus 261 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 340 (358)
T 1zg3_A 261 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFS 340 (358)
T ss_dssp GGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCC
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCC
Confidence 99998876 999999999999 99999998765433211 0111111111 1112234567889999999999999
Q ss_pred EEEEeee
Q 022248 276 SVELGNA 282 (300)
Q Consensus 276 ~v~~~~~ 282 (300)
.+++...
T Consensus 341 ~~~~~~~ 347 (358)
T 1zg3_A 341 SYKITPI 347 (358)
T ss_dssp EEEEEEE
T ss_pred eeEEEec
Confidence 9988763
No 111
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.72 E-value=1.6e-16 Score=125.60 Aligned_cols=123 Identities=17% Similarity=0.136 Sum_probs=99.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++.. +++|+|+++.+++. ..+++++++|+.+ ++++++||+|+++..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~-----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~ 87 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES-----------HRGGNLVRADLLC-SINQESVDVVVFNPP 87 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT-----------CSSSCEEECSTTT-TBCGGGCSEEEECCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc-----------ccCCeEEECChhh-hcccCCCCEEEECCC
Confidence 467799999999999999998754 99999999999987 1478999999987 566689999999887
Q ss_pred ccCcccH---------HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCC
Q 022248 204 LCSVKDV---------DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGF 274 (300)
Q Consensus 204 l~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 274 (300)
+++.++. ...+.++.+.| |||.+++...... ..+++.++++++||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~-------------------------~~~~l~~~l~~~gf 141 (170)
T 3q87_B 88 YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN-------------------------RPKEVLARLEERGY 141 (170)
T ss_dssp CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG-------------------------CHHHHHHHHHHTTC
T ss_pred CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC-------------------------CHHHHHHHHHHCCC
Confidence 7765433 56789999999 9999999874321 12478899999999
Q ss_pred cEEEEeeeccCC
Q 022248 275 SSVELGNAFLSN 286 (300)
Q Consensus 275 ~~v~~~~~~~~~ 286 (300)
+.+.+......+
T Consensus 142 ~~~~~~~~~~~~ 153 (170)
T 3q87_B 142 GTRILKVRKILG 153 (170)
T ss_dssp EEEEEEEEECSS
T ss_pred cEEEEEeeccCC
Confidence 988887665543
No 112
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=4e-16 Score=124.28 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=101.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++ .+.+++|+|+++.+++.++++++..++ +++.++.+|+.+ +++++.||+|++..+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI--KNCQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC--CSEEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC--CcEEEEECCccc-cccCCCCcEEEECCc
Confidence 4678999999999999999987 778999999999999999999988886 479999999877 666689999999887
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
.+...+++++.++ |||.+++....... ..++.+.++++||++..+
T Consensus 110 ----~~~~~~l~~~~~~--~gG~l~~~~~~~~~-------------------------~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--KINHIVANTIVLEN-------------------------AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ----SCHHHHHHHHHHT--TCCEEEEEESCHHH-------------------------HHHHHHHHHHTTCEEEEE
T ss_pred ----ccHHHHHHHHhhC--CCCEEEEEeccccc-------------------------HHHHHHHHHHcCCeEEEE
Confidence 6778889999998 99999998743210 126778899999875544
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.71 E-value=1.2e-16 Score=132.56 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=105.0
Q ss_pred HhhcCCCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCcccE
Q 022248 120 DNLRGKAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVDA 197 (300)
Q Consensus 120 ~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~ 197 (300)
.....++.+|||+||| +|.++..+++..+.+++|+|+++.+++.|++++...++ +++++.+|+..+ ++++++||+
T Consensus 50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS---NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp HTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEEECSSCSSTTTCCSCEEE
T ss_pred HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC---CcEEEeCCchhhhhcccCceeE
Confidence 3444678999999999 99999999875477999999999999999999988875 789999997543 455689999
Q ss_pred EEEcccccCccc-------------------HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCC
Q 022248 198 VVGTLVLCSVKD-------------------VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDG 258 (300)
Q Consensus 198 v~~~~~l~~~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (300)
|+++...++..+ ...+++++.++|||||++++......
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----------------------- 183 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE----------------------- 183 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-----------------------
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-----------------------
Confidence 998755443322 47789999999999999999753221
Q ss_pred cccchHHHHHHHhcCCcEEEEee
Q 022248 259 CHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 259 ~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
...+++.+.++++||+...+..
T Consensus 184 -~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 -KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEEE
T ss_pred -hHHHHHHHHHHHcCCceEEEEe
Confidence 0113778899999998666643
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.71 E-value=7.2e-17 Score=143.31 Aligned_cols=139 Identities=17% Similarity=0.187 Sum_probs=109.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|++++...++ +++++.+|+.+.+.++++||+|+++..
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~---~v~~~~~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL---KAQALHSDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC---CCEEEECSTTTTSCTTCCEEEEEECCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC---CeEEEEcchhhccccCCCeEEEEECCc
Confidence 36789999999999999999876 67999999999999999999988875 489999999988776789999999988
Q ss_pred ccC-----cccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 204 LCS-----VKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 204 l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
+++ ..+...+++++.++|||||+++++...... ...++...+. ++..+ ++.||++++
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~---~~~~l~~~f~--------------~v~~l-~~~gF~Vl~ 369 (381)
T 3dmg_A 308 FHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLK---YEPLLEEKFG--------------AFQTL-KVAEYKVLF 369 (381)
T ss_dssp CCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSC---HHHHHHHHHS--------------CCEEE-EESSSEEEE
T ss_pred hhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCC---hHHHHHHhhc--------------cEEEE-eCCCEEEEE
Confidence 887 456778999999999999999998754332 3333333322 12222 678999888
Q ss_pred Eeeecc
Q 022248 279 LGNAFL 284 (300)
Q Consensus 279 ~~~~~~ 284 (300)
......
T Consensus 370 a~~~~~ 375 (381)
T 3dmg_A 370 AEKRGR 375 (381)
T ss_dssp EECC--
T ss_pred EEEecc
Confidence 775543
No 115
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.71 E-value=7.4e-17 Score=135.37 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=107.2
Q ss_pred CCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC---CCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS---DASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~ 200 (300)
++.+|||||||+|..+..++. .++.+|+++|+++.+++.|+++++..++. +++++.+|+++++.. +++||+|++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~--~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK--GARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--ceEEEECcHHHhhcccccCCCceEEEE
Confidence 578999999999999999886 46789999999999999999999998874 799999999887643 479999998
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
.. +.+...+++.+.++|||||++++....... .. ..++.+.++..||+.+++.
T Consensus 158 ~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~-----~e------------------~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 158 RA----VAPLCVLSELLLPFLEVGGAAVAMKGPRVE-----EE------------------LAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp ES----SCCHHHHHHHHGGGEEEEEEEEEEECSCCH-----HH------------------HTTHHHHHHHHTEEEEEEE
T ss_pred CC----cCCHHHHHHHHHHHcCCCeEEEEEeCCCcH-----HH------------------HHHHHHHHHHcCCeEEEEE
Confidence 64 356788999999999999999986622110 00 1266778888999988887
Q ss_pred eeccC
Q 022248 281 NAFLS 285 (300)
Q Consensus 281 ~~~~~ 285 (300)
.....
T Consensus 211 ~~~~p 215 (249)
T 3g89_A 211 ALQLP 215 (249)
T ss_dssp EEECT
T ss_pred EeeCC
Confidence 66554
No 116
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.71 E-value=1.4e-16 Score=126.54 Aligned_cols=126 Identities=10% Similarity=0.057 Sum_probs=99.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|++++...++. .++ ++.+|... ++..+++||+|++.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVS-DRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCT-TSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCC-CCE-EEecchHhhhhccCCCCCEEEEC
Confidence 46779999999999999999875 4789999999999999999999888764 478 88888743 44333889999999
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
.++++ ..+++++.++|||||++++....... ...+.+.+++.|++...+.
T Consensus 102 ~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 102 GGLTA----PGVFAAAWKRLPVGGRLVANAVTVES-------------------------EQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp C-TTC----TTHHHHHHHTCCTTCEEEEEECSHHH-------------------------HHHHHHHHHHHCCEEEEEE
T ss_pred CcccH----HHHHHHHHHhcCCCCEEEEEeecccc-------------------------HHHHHHHHHHcCCeeEEEE
Confidence 98887 56789999999999999997743211 1256677788888866654
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.70 E-value=3.3e-17 Score=144.04 Aligned_cols=130 Identities=19% Similarity=0.204 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHH-------HHcCCCCC
Q 022248 106 SYEAEVAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAA-------VAAGLPLT 176 (300)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~-------~~~~~~~~ 176 (300)
.|.+.....+..+++.+. .++.+|||||||+|.++..++...+. +++|||+++.+++.|++.+ +..++...
T Consensus 153 vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~ 232 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHA 232 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCC
T ss_pred ccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 455555566777777665 57889999999999999999864444 5999999999999998754 33455335
Q ss_pred CEEEEecccCcCCCCC--CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 177 NFKFLQAVGEAIPVSD--ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 177 ~~~~~~~d~~~~~~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
+++|+++|+.++++.+ ..||+|+++..++ .++....|.++.++|||||+|++.+.....
T Consensus 233 rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 233 EYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp EEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CeEEEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 8999999999988754 4799999977653 578888999999999999999998765543
No 118
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.70 E-value=1.9e-16 Score=149.13 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=93.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcC----CCCCCEEEEecccCcCCCCCCcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAG----LPLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
.++.+|||||||+|.++..+++.. ..+|+|+|+++.+++.|++++.... ....+++|+++|+..+++.+++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 367899999999999999998754 2699999999999999998776431 1124899999999999998899999
Q ss_pred EEEcccccCcccHH--HHHHHHHHcccCCcEEEEEeccc
Q 022248 198 VVGTLVLCSVKDVD--MTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 198 v~~~~~l~~~~~~~--~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|++..+++|+++.. .+++++.++|||| .+++.+++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999999998765 5899999999999 777777544
No 119
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.70 E-value=5.3e-17 Score=133.56 Aligned_cols=148 Identities=18% Similarity=0.213 Sum_probs=103.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHH----HcCCCCCCEEEEecccCcCCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAV----AAGLPLTNFKFLQAVGEAIPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 198 (300)
.++.+|||||||+|.++..+++. ++.+++|+|+|+.|++.+.+.++ ..++ +++.++++|++++++.++. |.|
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~--~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL--PNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC--TTEEEEECCSTTCCSCCCE-EEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC--CceEEEecchhhCCCCCCC-CEE
Confidence 46789999999999999999874 47899999999998886544332 2343 4899999999999988777 877
Q ss_pred EEcc---cc--cCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhh-cCCcccchHHHHHHHhc
Q 022248 199 VGTL---VL--CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIV-SDGCHLTRQTGNNISEA 272 (300)
Q Consensus 199 ~~~~---~l--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~a 272 (300)
.... .+ ++++++..+++++.++|||||++++........... ....... ....+..+++.++++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~l~~a 174 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSV--------PEVGEHPEPTPDSADEWLAPRYAEA 174 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBC--------GGGTTCCCCCHHHHHHHHHHHHHHT
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccc--------cccccCCccchHHHHHHHHHHHHHc
Confidence 7433 22 255666889999999999999999954322111000 0000000 00011234588899999
Q ss_pred CCcEEEEeee
Q 022248 273 GFSSVELGNA 282 (300)
Q Consensus 273 Gf~~v~~~~~ 282 (300)
||++++++..
T Consensus 175 Gf~i~~~~~~ 184 (218)
T 3mq2_A 175 GWKLADCRYL 184 (218)
T ss_dssp TEEEEEEEEE
T ss_pred CCCceeeecc
Confidence 9999888754
No 120
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.70 E-value=2.2e-16 Score=126.95 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=93.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...++...++.++.+|+... ++++.||+|++...
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VKDRKYNKIITNPP 128 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CTTSCEEEEEECCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cccCCceEEEECCC
Confidence 36789999999999999999876 77999999999999999999988776411399999998773 44678999999888
Q ss_pred ccC-cccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 204 LCS-VKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 204 l~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+++ ..+...+++++.++|+|||.+++..+..
T Consensus 129 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 129 IRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 776 4567789999999999999999988543
No 121
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.70 E-value=3.5e-16 Score=133.42 Aligned_cols=140 Identities=20% Similarity=0.250 Sum_probs=108.2
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD 192 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 192 (300)
....+++.+..++.+|||+|||+|.++..++. .++.+++++|+|+.+++.|+++++..++. ++.++.+|+... +++
T Consensus 98 l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~--~v~~~~~d~~~~-~~~ 174 (276)
T 2b3t_A 98 LVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK--NIHILQSDWFSA-LAG 174 (276)
T ss_dssp HHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC--SEEEECCSTTGG-GTT
T ss_pred HHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEcchhhh-ccc
Confidence 33444444434677999999999999999986 45779999999999999999999888764 799999998764 346
Q ss_pred CcccEEEEcc-------------cccCc------------ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHh
Q 022248 193 ASVDAVVGTL-------------VLCSV------------KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNV 247 (300)
Q Consensus 193 ~~~D~v~~~~-------------~l~~~------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 247 (300)
++||+|+++. ++++. .+...+++++.++|+|||++++...
T Consensus 175 ~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--------------- 239 (276)
T 2b3t_A 175 QQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--------------- 239 (276)
T ss_dssp CCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC---------------
T ss_pred CCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC---------------
Confidence 7899999973 23222 2446789999999999999999631
Q ss_pred hhhhhhhhcCCcccchHHHHHHHhcCCcEEEEeee
Q 022248 248 VDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 282 (300)
....+++.++++++||+.+++...
T Consensus 240 -----------~~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 240 -----------WQQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp -----------SSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred -----------chHHHHHHHHHHHCCCcEEEEEec
Confidence 112347889999999997776543
No 122
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.70 E-value=1.5e-16 Score=131.05 Aligned_cols=137 Identities=12% Similarity=0.176 Sum_probs=102.2
Q ss_pred CCCCeEEEECCCCChhHHHhHh--CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc---CCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA--DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA---IPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~--~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++ .+..+|+|+|+++.|++.++++++.. .++..+.+|... .++..+.+|+|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~----~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR----RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----cCeeEEEEeccCccccccccceEEEE
Confidence 7899999999999999999997 36679999999999999998876543 478888888754 45667899999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
++.. .+..+...++.++.+.|||||+++++......+. . .... ...++..+.|+++||+.++
T Consensus 152 f~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~-----~----~p~~-------~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 152 YADV--AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDV-----T----TEPS-------EVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp EECC--CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHH-----H----TCCC-------HHHHHHHHHHHHTTCCEEE
T ss_pred EEec--cCChhHHHHHHHHHHhccCCCEEEEEEecccCCC-----C----CChH-------HHHHHHHHHHHHCCCEEEE
Confidence 8743 3445777899999999999999999763322110 0 0000 0012445678899999887
Q ss_pred Eeee
Q 022248 279 LGNA 282 (300)
Q Consensus 279 ~~~~ 282 (300)
....
T Consensus 214 ~i~L 217 (233)
T 4df3_A 214 VVHL 217 (233)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 7643
No 123
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.70 E-value=3.3e-16 Score=132.36 Aligned_cols=131 Identities=14% Similarity=0.197 Sum_probs=103.9
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEEEcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVVGTL 202 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~~~ 202 (300)
++.+|||+|||+|.++..+++....+++|+|+++.+++.|++++...++. +++.++.+|+.+++ +++++||+|+++-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLE-DQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCT-TTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCc-ccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 67899999999999999998765559999999999999999999988875 57999999998875 5578999999964
Q ss_pred cccCc--------------------ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccc
Q 022248 203 VLCSV--------------------KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLT 262 (300)
Q Consensus 203 ~l~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
..... .+...+++.+.++|||||+++++... . ..
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~------------------------~~ 181 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP--E------------------------RL 181 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT--T------------------------TH
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH--H------------------------HH
Confidence 33222 23457899999999999999996521 1 11
Q ss_pred hHHHHHHHhcCCcEEEEeee
Q 022248 263 RQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~~~~ 282 (300)
.++.+.+++.||....+...
T Consensus 182 ~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 182 LDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp HHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEEe
Confidence 26667788888887766544
No 124
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.70 E-value=8e-17 Score=132.49 Aligned_cols=107 Identities=21% Similarity=0.237 Sum_probs=90.4
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C--CCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P--VSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++ .++..++|+|+++.+++.|+++++..++. ++.++.+|+..+ + +++++||.|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~--nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS--NLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS--SEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHcCCCChheEE
Confidence 4678999999999999999987 46779999999999999999999888874 899999999874 3 6789999999
Q ss_pred EcccccCcccH--------HHHHHHHHHcccCCcEEEEEec
Q 022248 200 GTLVLCSVKDV--------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 200 ~~~~l~~~~~~--------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.+...+.... ..+++++.++|||||++++.+.
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 98654433221 2589999999999999999873
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.69 E-value=3.6e-16 Score=131.72 Aligned_cols=128 Identities=23% Similarity=0.240 Sum_probs=103.7
Q ss_pred hcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 122 LRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 122 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...++. +.+..+|+... +++++||+|+++
T Consensus 117 ~~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~---v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 117 HLRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR---PRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC---CEEEESCHHHH-GGGCCEEEEEEE
T ss_pred hcCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc---EEEEECChhhc-CcCCCCCEEEEC
Confidence 3457789999999999999998875 449999999999999999999887753 88899888663 345789999987
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
...+ ....++.++.++|||||++++++.... ..+++.++++++||++++...
T Consensus 192 ~~~~---~~~~~l~~~~~~LkpgG~lils~~~~~-------------------------~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 192 LYAE---LHAALAPRYREALVPGGRALLTGILKD-------------------------RAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp CCHH---HHHHHHHHHHHHEEEEEEEEEEEEEGG-------------------------GHHHHHHHHHHTTCEEEEEEE
T ss_pred CcHH---HHHHHHHHHHHHcCCCCEEEEEeeccC-------------------------CHHHHHHHHHHCCCEEEEEec
Confidence 5443 346789999999999999999874321 134888999999999988765
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 244 ~ 244 (254)
T 2nxc_A 244 E 244 (254)
T ss_dssp E
T ss_pred c
Confidence 4
No 126
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.69 E-value=4.1e-16 Score=125.11 Aligned_cols=122 Identities=19% Similarity=0.268 Sum_probs=99.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-CcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-ASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++...++. +++.++.+|+.. ++++ +.||+|++..
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLG-DNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCC-TTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCC-cceEEEecCHHH-hcccCCCCCEEEECC
Confidence 467899999999999999998755 79999999999999999999888763 489999999876 2222 5899999987
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcE
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSS 276 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 276 (300)
.++ +...+++++.++|+|||.+++...... ...++.+.+++.||..
T Consensus 109 ~~~---~~~~~l~~~~~~l~~gG~l~~~~~~~~-------------------------~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 109 SGG---ELQEILRIIKDKLKPGGRIIVTAILLE-------------------------TKFEAMECLRDLGFDV 154 (192)
T ss_dssp CTT---CHHHHHHHHHHTEEEEEEEEEEECBHH-------------------------HHHHHHHHHHHTTCCC
T ss_pred chH---HHHHHHHHHHHhcCCCcEEEEEecCcc-------------------------hHHHHHHHHHHCCCce
Confidence 765 457889999999999999999874311 0136778899999953
No 127
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.69 E-value=1.5e-16 Score=139.65 Aligned_cols=103 Identities=24% Similarity=0.268 Sum_probs=90.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc-
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL- 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~- 202 (300)
.++.+|||||||+|.++..+++....+++|+|+++ +++.|+++++..++. ++++++.+|++++++++++||+|++..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLE-DTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCT-TTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCC-CcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 46789999999999999999876556999999996 999999999988874 589999999999988888999999876
Q ss_pred --cccCcccHHHHHHHHHHcccCCcEEE
Q 022248 203 --VLCSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 203 --~l~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
.+.+..+...++.++.++|||||+++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 45555677889999999999999998
No 128
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=5.2e-16 Score=128.77 Aligned_cols=132 Identities=15% Similarity=0.182 Sum_probs=99.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc----CCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA----IPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.++++++.. +++.++.+|+.. .++. +.||+|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~~~~~~-~~~D~v 147 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDANKPQEYANIV-EKVDVI 147 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTTCGGGGTTTS-CCEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCCCcccccccC-ccEEEE
Confidence 46789999999999999999875 3479999999999999999886543 489999999987 6666 789999
Q ss_pred EEcccccCcccH---HHHHHHHHHcccCCcEEEEEecccC-CCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCC
Q 022248 199 VGTLVLCSVKDV---DMTLQEVRRVLKPGGIYLFVEHVAA-KDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGF 274 (300)
Q Consensus 199 ~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 274 (300)
+. +++++ ..+++++.++|||||++++...... ....... . ...+++. +|+++||
T Consensus 148 ~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~---~-------------~~~~~l~-~l~~~Gf 205 (230)
T 1fbn_A 148 YE-----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPK---E-------------IFKEQKE-ILEAGGF 205 (230)
T ss_dssp EE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHH---H-------------HHHHHHH-HHHHHTE
T ss_pred EE-----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHH---H-------------hhHHHHH-HHHHCCC
Confidence 93 34444 6779999999999999999721111 1100000 0 0124777 8999999
Q ss_pred cEEEEeee
Q 022248 275 SSVELGNA 282 (300)
Q Consensus 275 ~~v~~~~~ 282 (300)
+.++....
T Consensus 206 ~~~~~~~~ 213 (230)
T 1fbn_A 206 KIVDEVDI 213 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 98887654
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.68 E-value=2.1e-16 Score=139.17 Aligned_cols=105 Identities=21% Similarity=0.275 Sum_probs=92.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++.+..+|+|+|+| .+++.|+++++..++. .+++++.+|++++++++++||+|++..+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLD-HVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCT-TTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCC-CcEEEEECcHHHccCCCCceEEEEEccc
Confidence 4678999999999999999998755699999999 5999999999988875 5699999999999988899999999765
Q ss_pred c---cCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 204 L---CSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 204 l---~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
. .+..+...++.++.++|||||+++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 3 34478889999999999999999753
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.68 E-value=1.7e-16 Score=129.04 Aligned_cols=109 Identities=8% Similarity=0.023 Sum_probs=89.7
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC--CCCc-ccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV--SDAS-VDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~-~D~v~~~ 201 (300)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++..++++++.+|+.++.. .+++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 568999999999999998776555699999999999999999998887622489999999877532 3578 9999998
Q ss_pred ccccCcccHHHHHHHH--HHcccCCcEEEEEeccc
Q 022248 202 LVLCSVKDVDMTLQEV--RRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~ 234 (300)
..++ ..+...+++.+ .++|+|||++++.....
T Consensus 133 ~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7744 56677888888 67899999999977543
No 131
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.68 E-value=1.1e-15 Score=125.07 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=79.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC----CCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI----PVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+.+..+.. .++.++.+|+... ++. ++||+|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~-~~fD~V 130 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWKYSGIV-EKVDLI 130 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGGTTTTC-CCEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCCCCchhhcccc-cceeEE
Confidence 467899999999999999988743 469999999999887776665543 3788999998763 444 789999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++.. ..+ .+...+++++.++|||||++++..
T Consensus 131 ~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 131 YQDI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EECC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9973 221 233456899999999999999985
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.67 E-value=1.2e-15 Score=130.09 Aligned_cols=132 Identities=13% Similarity=0.090 Sum_probs=105.1
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..++.+|||+|||+|.++..+++....+++|+|+++.+++.|+++++..++. .+++++++|+.+++. ++.||+|++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~-~~v~~~~~D~~~~~~-~~~fD~Vi~~~ 200 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-DRMSAYNMDNRDFPG-ENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-TTEEEECSCTTTCCC-CSCEEEEEECC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEECCHHHhcc-cCCccEEEECC
Confidence 3468899999999999999998754447999999999999999999988875 469999999998876 68999999854
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
. .+...++.++.++|||||++++.+....... .....+++.+.++++||+...+
T Consensus 201 p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-------------------~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 201 V----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-------------------PREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp C----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-------------------TTTTHHHHHHHHHHTTCEEEEE
T ss_pred c----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc-------------------cccHHHHHHHHHHHcCCeeEEe
Confidence 3 3345678999999999999999886542100 0112347788999999997653
No 133
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.67 E-value=2.8e-16 Score=133.93 Aligned_cols=125 Identities=20% Similarity=0.229 Sum_probs=103.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHc-CCCCCCEEEEecccCcCCCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAA-GLPLTNFKFLQAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|+++++.. +. ++++++.+|+.+ +++++.||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI--GNVRTSRSDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC--TTEEEECSCTTT-CCCSCCEEEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC--CcEEEEECchhc-cCcCCCccEEEE
Confidence 46789999999999999999874 4679999999999999999999877 64 489999999987 566788999998
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
+++++..+++++.++|||||++++.+.... ..+++.+.++++||+.+++.
T Consensus 186 -----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-------------------------~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 186 -----DIPDPWNHVQKIASMMKPGSVATFYLPNFD-------------------------QSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp -----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH-------------------------HHHHHHHHSGGGTEEEEEEE
T ss_pred -----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH-------------------------HHHHHHHHHHHCCCeEEEEE
Confidence 456777899999999999999999884321 01256677888999988776
Q ss_pred e
Q 022248 281 N 281 (300)
Q Consensus 281 ~ 281 (300)
.
T Consensus 236 ~ 236 (275)
T 1yb2_A 236 E 236 (275)
T ss_dssp E
T ss_pred E
Confidence 5
No 134
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.67 E-value=9e-16 Score=126.55 Aligned_cols=118 Identities=18% Similarity=0.157 Sum_probs=94.4
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IP 189 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~ 189 (300)
..+..++.. .++.+|||||||+|..+..+++. .+.+++++|+++.+++.|+++++..++. ++++++.+|+.+ ++
T Consensus 48 ~~l~~l~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 48 QIMDAVIRE--YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ-DKVTILNGASQDLIP 124 (221)
T ss_dssp HHHHHHHHH--HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHGG
T ss_pred HHHHHHHHh--cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC-CceEEEECCHHHHHH
Confidence 344444433 26789999999999999999873 3679999999999999999999988874 579999999855 33
Q ss_pred CC-----CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 190 VS-----DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 190 ~~-----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.. .++||+|++....++..+....+..+ ++|||||++++.+...
T Consensus 125 ~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 125 QLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp GTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 22 26899999988777776666778888 9999999999876543
No 135
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.67 E-value=7.6e-16 Score=125.84 Aligned_cols=101 Identities=22% Similarity=0.173 Sum_probs=90.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|++++...++. +++++.+|+......+++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH--NVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC--ceEEEECCcccCCccCCCccEEEEccc
Confidence 46789999999999999999876 679999999999999999999888764 899999999887666789999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
++++++ ++.++|||||++++....
T Consensus 153 ~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred hhhhhH------HHHHhcccCcEEEEEEcC
Confidence 999875 689999999999998754
No 136
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.66 E-value=3e-15 Score=121.91 Aligned_cols=100 Identities=14% Similarity=0.216 Sum_probs=87.4
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
++.+|||+|||+|.++..++.. ++.+++++|+++.+++.+++++...++. ++.++.+|+...+ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~-~~~~~D~i~~~~- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE--NIEPVQSRVEEFP-SEPPFDGVISRA- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS--SEEEEECCTTTSC-CCSCEEEEECSC-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CeEEEecchhhCC-ccCCcCEEEEec-
Confidence 4789999999999999999874 5789999999999999999999888764 6999999998876 457899999754
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.+...+++++.++|+|||++++..
T Consensus 141 ---~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 ---FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ---SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3567889999999999999999974
No 137
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.66 E-value=1.7e-15 Score=130.81 Aligned_cols=140 Identities=23% Similarity=0.183 Sum_probs=103.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH--cCCCCCCEEEEecccCcCCC--CCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA--AGLPLTNFKFLQAVGEAIPV--SDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~d~~~~~~--~~~~~D~v 198 (300)
.++.+|||||||+|.++..+++. ...+++++|+++.+++.|++.+.. .+...++++++.+|+...+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 46789999999999999999875 356999999999999999998742 12223589999999977643 46899999
Q ss_pred EEcccccCcccH----HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCC
Q 022248 199 VGTLVLCSVKDV----DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGF 274 (300)
Q Consensus 199 ~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 274 (300)
++.......+.. ..+++++.++|||||++++........ .....++.+.|+++||
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---------------------~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD---------------------LELIEKMSRFIRETGF 232 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC---------------------HHHHHHHHHHHHHHTC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc---------------------hHHHHHHHHHHHhCCC
Confidence 997655443322 578999999999999999975322110 0112478889999999
Q ss_pred cEEEEeeecc
Q 022248 275 SSVELGNAFL 284 (300)
Q Consensus 275 ~~v~~~~~~~ 284 (300)
..+......+
T Consensus 233 ~~v~~~~~~v 242 (304)
T 3bwc_A 233 ASVQYALMHV 242 (304)
T ss_dssp SEEEEEECCC
T ss_pred CcEEEEEeec
Confidence 9887765443
No 138
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.66 E-value=1.5e-16 Score=126.47 Aligned_cols=119 Identities=15% Similarity=0.156 Sum_probs=95.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC---CCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV---SDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~D~v~~ 200 (300)
.++.+|||||||. +++|+|+.|++.|+++.. .++.++++|++.+++ ++++||+|++
T Consensus 11 ~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~------~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG------NEGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT------TTSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc------cCcEEEEechhcCccccCCCCCEeEEEE
Confidence 5788999999986 239999999999998752 258899999999887 7899999999
Q ss_pred cccccCc-ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 201 TLVLCSV-KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 201 ~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
.++++|+ ++...++++++|+|||||++++..+....... ....++.+++.++|+++|| +. +
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~aGf-i~-~ 131 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN----------------NSKVKTASKLCSALTLSGL-VE-V 131 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS----------------SSSSCCHHHHHHHHHHTTC-EE-E
T ss_pred CChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc----------------ccccCCHHHHHHHHHHCCC-cE-e
Confidence 9999999 89999999999999999999996643221110 1122456799999999999 44 4
Q ss_pred ee
Q 022248 280 GN 281 (300)
Q Consensus 280 ~~ 281 (300)
..
T Consensus 132 ~~ 133 (176)
T 2ld4_A 132 KE 133 (176)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 139
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.66 E-value=1e-16 Score=126.32 Aligned_cols=104 Identities=14% Similarity=0.191 Sum_probs=88.2
Q ss_pred CCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.+..+|||+|||+|.++..++. .+..+|+++|+++.|++.+++++...|.. .++.+ .|.... .+.++||+|+...
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~-~~v~~--~d~~~~-~~~~~~DvVLa~k 123 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTT-IKYRF--LNKESD-VYKGTYDVVFLLK 123 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCS-SEEEE--ECCHHH-HTTSEEEEEEEET
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ccEEE--eccccc-CCCCCcChhhHhh
Confidence 4678999999999999999976 46779999999999999999999998874 25666 555443 3568899999999
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++|++++.+..+.++.+.|+|||+++-..
T Consensus 124 ~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 124 MLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp CHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99999777778889999999999888766
No 140
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.66 E-value=4.2e-16 Score=138.56 Aligned_cols=105 Identities=23% Similarity=0.293 Sum_probs=91.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++....+|+|+|+| .+++.|+++++..++. .+++++.+|+++++++ ++||+|++..+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLD-HIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCT-TTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCC-CeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 5778999999999999999988644599999999 9999999999998885 5799999999998876 89999999665
Q ss_pred ccCc---ccHHHHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSV---KDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.+.+ .+...++.++.++|||||++++..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5554 457789999999999999998754
No 141
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.66 E-value=1.3e-15 Score=128.32 Aligned_cols=126 Identities=17% Similarity=0.110 Sum_probs=104.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHc-CCCCCCEEEEecccCcCCCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAA-GLPLTNFKFLQAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|+++++.. +. +++.++.+|+.+.+++++.||+|++
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV--ENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC--CCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCEEEEECchhhcCCCCCCcCEEEE
Confidence 46789999999999999999875 3679999999999999999998877 63 5899999999988788889999998
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
. .++...+++++.++|+|||++++..+... . ..++.+.|+++||..+++.
T Consensus 173 ~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-------~------------------~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 173 D-----LMEPWKVLEKAALALKPDRFLVAYLPNIT-------Q------------------VLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp E-----SSCGGGGHHHHHHHEEEEEEEEEEESCHH-------H------------------HHHHHHHHTTTTEEEEEEE
T ss_pred C-----CcCHHHHHHHHHHhCCCCCEEEEEeCCHH-------H------------------HHHHHHHHHHCCCceEEEE
Confidence 3 45667889999999999999999884321 0 1256677788999977765
Q ss_pred e
Q 022248 281 N 281 (300)
Q Consensus 281 ~ 281 (300)
.
T Consensus 223 ~ 223 (258)
T 2pwy_A 223 E 223 (258)
T ss_dssp E
T ss_pred E
Confidence 4
No 142
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.65 E-value=8.2e-16 Score=125.02 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=88.8
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 203 (300)
++.+|||+|||+|.++..++.....+|+++|+++.+++.|+++++..++ ++++++++|+.+ ++..++.||+|++...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA--GNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC--CSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC--CcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 5689999999999999987765556999999999999999999998886 489999999877 5666679999999766
Q ss_pred ccCcccHHHHHHHHHH--cccCCcEEEEEecc
Q 022248 204 LCSVKDVDMTLQEVRR--VLKPGGIYLFVEHV 233 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 233 (300)
++ ..+...+++.+.+ +|+|||++++....
T Consensus 132 ~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 33 4566778888865 59999999987753
No 143
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.65 E-value=3.2e-16 Score=132.00 Aligned_cols=152 Identities=11% Similarity=0.126 Sum_probs=102.4
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC---CCC---CCcccE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI---PVS---DASVDA 197 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~~~D~ 197 (300)
++.+|||+|||+|.++..++.. ++.+++|+|+++.+++.|+++++..++. .+++++.+|+.+. +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLS-DLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCC-ccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 5679999999999999888764 4679999999999999999999988874 4699999997652 344 268999
Q ss_pred EEEcccccCcc---------------cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhh--cCCcc
Q 022248 198 VVGTLVLCSVK---------------DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIV--SDGCH 260 (300)
Q Consensus 198 v~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 260 (300)
|+++-..+... ....++.++.++|||||.+.+++. ................ .....
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~-------~~~~~~~~l~~~g~~~~~~~~~~ 216 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR-------IIHDSLQLKKRLRWYSCMLGKKC 216 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHH-------HHHHHHHHGGGBSCEEEEESSTT
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH-------HHHHHHhcccceEEEEECCCChh
Confidence 99974443322 112457889999999999887652 1111111222111111 11112
Q ss_pred cchHHHHHHHhcCCcEEEEeeecc
Q 022248 261 LTRQTGNNISEAGFSSVELGNAFL 284 (300)
Q Consensus 261 ~~~~~~~~l~~aGf~~v~~~~~~~ 284 (300)
..+++.++|+++||+.+++.....
T Consensus 217 ~~~~~~~~l~~~Gf~~v~~~~~~~ 240 (254)
T 2h00_A 217 SLAPLKEELRIQGVPKVTYTEFCQ 240 (254)
T ss_dssp SHHHHHHHHHHTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCceEEEEEec
Confidence 236889999999999988775543
No 144
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.65 E-value=2.8e-15 Score=124.58 Aligned_cols=137 Identities=14% Similarity=0.155 Sum_probs=98.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc---CCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA---IPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+.+.++.. .++.++.+|+.. +++.+++||+|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEcccCChhhhcccCCcEEEE
Confidence 46789999999999999999875 4579999999999888888777664 489999999987 45557899999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
++... .......++.++.++|||||++++......... ....... + .++ .++|+++||+.++
T Consensus 152 ~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~---------~~~~~~~-----~-~~~-~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 152 FADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDS---------TASAEAV-----F-ASE-VKKMQQENMKPQE 213 (233)
T ss_dssp EECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCS---------SSCHHHH-----H-HHH-HHTTGGGTEEEEE
T ss_pred EEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEccccccc---------CCCHHHH-----H-HHH-HHHHHHCCCceEE
Confidence 99654 222234568899999999999999653210000 0000000 0 123 4788999999888
Q ss_pred Eeee
Q 022248 279 LGNA 282 (300)
Q Consensus 279 ~~~~ 282 (300)
....
T Consensus 214 ~~~~ 217 (233)
T 2ipx_A 214 QLTL 217 (233)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6543
No 145
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.65 E-value=7.4e-16 Score=128.05 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=92.5
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P- 189 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~- 189 (300)
.++..++.. .++.+|||||||+|.++..+++. ++.+++++|+++.+++.|+++++..++. ++++++.+|+.+. +
T Consensus 61 ~~l~~~~~~--~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 61 DLIKQLIRM--NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFE-NQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHH--HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEEESCGGGCHHH
T ss_pred HHHHHHHhh--cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHHHh
Confidence 344444433 26789999999999999999873 4789999999999999999999988874 5899999999764 4
Q ss_pred CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 190 VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
..+++||+|++... ..+...+++++.++|||||++++-+.
T Consensus 138 ~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 34689999997643 45667789999999999999988553
No 146
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=3.2e-15 Score=125.48 Aligned_cols=105 Identities=19% Similarity=0.210 Sum_probs=88.6
Q ss_pred CCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCC--CCcccEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVS--DASVDAVV 199 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~--~~~~D~v~ 199 (300)
++.+|||||||+|..+..+++. + +.+++++|+++.+++.|+++++..++. ++++++.+|+.+ ++.. .++||+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD-QRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 6789999999999999999874 2 679999999999999999999988875 589999999866 3332 34899999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+.. ...+...+++++.++|||||++++.+..
T Consensus 142 ~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDA---DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECS---CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECC---chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 865 3456677899999999999999987643
No 147
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.65 E-value=5.5e-16 Score=135.38 Aligned_cols=103 Identities=24% Similarity=0.323 Sum_probs=89.4
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc-
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV- 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~- 203 (300)
++.+|||||||+|.++..+++....+++|+|++ .+++.|+++++..++. ++++++.+|++++++++++||+|++...
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFS-DKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCT-TTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCC-CCEEEEECchhhccCCCCcccEEEEeCch
Confidence 678999999999999999987655699999999 6999999999988875 5799999999999888789999998754
Q ss_pred --ccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 204 --LCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 204 --l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
+.+......++.++.++|||||+++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 34445678899999999999999974
No 148
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=4.6e-16 Score=123.66 Aligned_cols=109 Identities=16% Similarity=0.133 Sum_probs=88.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++....+++|+|+++.+++.|+++++..++. +++.++.+|+.+ ++..++.||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAE-NRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCG-GGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 367899999999999999998775579999999999999999999887764 479999999877 344446799999976
Q ss_pred cccCcccHHHHHHHHH--HcccCCcEEEEEeccc
Q 022248 203 VLCSVKDVDMTLQEVR--RVLKPGGIYLFVEHVA 234 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 234 (300)
..+ .......++.+. ++|+|||++++.....
T Consensus 109 ~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 109 PYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 542 234556677776 9999999999987543
No 149
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=1.9e-15 Score=127.28 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=104.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|+++++..++. .+++++.+|+.+. +++++||+|++.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~D~v~~~ 169 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD-DRVTIKLKDIYEG-IEEENVDHVILD 169 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT-TTEEEECSCGGGC-CCCCSEEEEEEC
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC-CceEEEECchhhc-cCCCCcCEEEEC
Confidence 46789999999999999999874 3789999999999999999999988874 4599999999854 667889999983
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcC--CcEEEE
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAG--FSSVEL 279 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG--f~~v~~ 279 (300)
.++...+++++.++|+|||++++..+... ...++.+.++++| |..+++
T Consensus 170 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~-------------------------~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 170 -----LPQPERVVEHAAKALKPGGFFVAYTPCSN-------------------------QVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESSHH-------------------------HHHHHHHHHHHTGGGBSCCEE
T ss_pred -----CCCHHHHHHHHHHHcCCCCEEEEEECCHH-------------------------HHHHHHHHHHHcCCCccccEE
Confidence 46667789999999999999999774221 0126678888999 987776
Q ss_pred eee
Q 022248 280 GNA 282 (300)
Q Consensus 280 ~~~ 282 (300)
...
T Consensus 220 ~e~ 222 (255)
T 3mb5_A 220 INV 222 (255)
T ss_dssp ECC
T ss_pred EEE
Confidence 543
No 150
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=1.2e-16 Score=130.63 Aligned_cols=132 Identities=17% Similarity=0.092 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-----CcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-----ASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~D~ 197 (300)
.++.+|||+|||+|.++..+++. ++.+++|+|+++.+++.|++++...+. +++++++|+.+ ++++ ++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~-~~~~~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA---VVDWAAADGIE-WLIERAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------CCHHHHHH-HHHHHHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC---ceEEEEcchHh-hhhhhhhccCcccE
Confidence 46789999999999999999874 467999999999999999999877654 68889999877 4444 89999
Q ss_pred EEEcccccCccc--------------------------HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhh
Q 022248 198 VVGTLVLCSVKD--------------------------VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPL 251 (300)
Q Consensus 198 v~~~~~l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 251 (300)
|+++...+...+ ...+++++.++|||||++++.+....
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------- 168 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---------------- 168 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS----------------
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc----------------
Confidence 999644332211 16778999999999999555553211
Q ss_pred hhhhcCCcccchHHHHHHH--hcCCcEEEEeeecc
Q 022248 252 QQIVSDGCHLTRQTGNNIS--EAGFSSVELGNAFL 284 (300)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~--~aGf~~v~~~~~~~ 284 (300)
..+++.++++ ++||..+++.....
T Consensus 169 ---------~~~~~~~~l~~~~~gf~~~~~~~~~~ 194 (215)
T 4dzr_A 169 ---------QADEVARLFAPWRERGFRVRKVKDLR 194 (215)
T ss_dssp ---------CHHHHHHHTGGGGGGTEECCEEECTT
T ss_pred ---------cHHHHHHHHHHhhcCCceEEEEEecC
Confidence 1236677788 88998777665433
No 151
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.64 E-value=1.8e-15 Score=124.59 Aligned_cols=119 Identities=15% Similarity=0.243 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc
Q 022248 111 VAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA 187 (300)
Q Consensus 111 ~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 187 (300)
...++..+..... .++.+|||||||+|..+..+++. .+.+++++|+++.+++.|+++++..++..++++++.+|+.+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 3344444444332 12349999999999999999873 36899999999999999999999988743589999999866
Q ss_pred C-C-CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 188 I-P-VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 188 ~-~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
. + +++++||+|++.... .+...+++++.++|||||++++.+.
T Consensus 121 ~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 121 VMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 4 2 346899999986533 4566789999999999999999543
No 152
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=127.15 Aligned_cols=107 Identities=21% Similarity=0.273 Sum_probs=85.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH------cCCCCCCEEEEecccCc-CC--CCCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA------AGLPLTNFKFLQAVGEA-IP--VSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~------~~~~~~~~~~~~~d~~~-~~--~~~~ 193 (300)
.++.+|||||||+|.++..+++. ++..++|+|+++.+++.|+++++. .++ .++.++.+|+.. ++ ++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~--~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF--QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC--TTEEEEECCTTTCHHHHCCTT
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC--CeEEEEECcHHHhhhhhCCCc
Confidence 46678999999999999999874 577999999999999999988764 233 589999999987 66 7789
Q ss_pred cccEEEEcccccCccc--------HHHHHHHHHHcccCCcEEEEEec
Q 022248 194 SVDAVVGTLVLCSVKD--------VDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+||.|++.+...+... ...+++++.++|||||.|++...
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9999997654333211 13689999999999999999763
No 153
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.63 E-value=3.2e-15 Score=122.58 Aligned_cols=130 Identities=11% Similarity=0.010 Sum_probs=103.4
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
.+.+++.+|||||||+|.++..++... ..+++++|+++.+++.|+++++..++. +++++..+|..+...+++.||+|+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~-~~I~~~~gD~l~~~~~~~~~D~Iv 95 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLT-SKIDVRLANGLSAFEEADNIDTIT 95 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGGCCGGGCCCEEE
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECchhhccccccccCEEE
Confidence 334577899999999999999998753 568999999999999999999999985 579999999987665444799988
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
...+.- .-...++.+..+.|+++|+|++..... .+.+++.|.+.||.+++.
T Consensus 96 iaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~~---------------------------~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 96 ICGMGG--RLIADILNNDIDKLQHVKTLVLQPNNR---------------------------EDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCCEEEEEESSC---------------------------HHHHHHHHHHTTEEEEEE
T ss_pred EeCCch--HHHHHHHHHHHHHhCcCCEEEEECCCC---------------------------hHHHHHHHHHCCCEEEEE
Confidence 644322 234567888999999999999876321 137788889999997766
Q ss_pred e
Q 022248 280 G 280 (300)
Q Consensus 280 ~ 280 (300)
.
T Consensus 147 ~ 147 (230)
T 3lec_A 147 D 147 (230)
T ss_dssp E
T ss_pred E
Confidence 5
No 154
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=1.3e-15 Score=121.84 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=88.7
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC----CCCCCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI----PVSDASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v~~ 200 (300)
++.+|||+|||+|.++..+++....+++|+|+++.+++.|++++...++. ++++++.+|+.+. +..++.||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEP-EKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCC-cceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 67899999999999999888765679999999999999999999888763 4799999998763 223678999999
Q ss_pred cccccCcccHHHHHHHH--HHcccCCcEEEEEeccc
Q 022248 201 TLVLCSVKDVDMTLQEV--RRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~ 234 (300)
....+ ..+....++.+ .++|+|||++++.....
T Consensus 123 ~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 87633 34566677777 89999999999977443
No 155
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.63 E-value=3.8e-15 Score=123.73 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-
Q 022248 111 VAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI- 188 (300)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~- 188 (300)
....+..++.. .++.+|||+|||+|.++..+++. ++.+++++|+++.+++.|++++...++. .++.++.+|+...
T Consensus 42 ~~~~l~~~~~~--~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 42 GMESLLHLLKM--AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLE-SRIELLFGDALQLG 118 (233)
T ss_dssp HHHHHHHHHHH--HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCT-TTEEEECSCGGGSH
T ss_pred HHHHHHHHHhc--cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHH
Confidence 33444444433 36779999999999999999874 3679999999999999999999888874 4799999998774
Q ss_pred CCC--CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 189 PVS--DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 189 ~~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.. ++.||+|++.... .+...+++++.++|+|||++++.+.
T Consensus 119 ~~~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp HHHTTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred HhcccCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 332 5789999987664 3677889999999999999999754
No 156
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.63 E-value=3e-15 Score=122.39 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=86.8
Q ss_pred CCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~ 201 (300)
++.+|||||||+|..+..+++. + +.+++++|+++.+++.|+++++..++. ++++++.+|+.+. +..++ ||+|++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI-DRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG-GGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-ceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 5679999999999999999874 2 679999999999999999999887764 5799999998664 54456 9999987
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.. ..+...+++++.++|||||++++.+.
T Consensus 134 ~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 134 CD---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TT---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CC---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 42 35678899999999999999998653
No 157
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.63 E-value=3.7e-15 Score=131.18 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=94.2
Q ss_pred HHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 115 KSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 115 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
...+++.+. .++.+|||||||+|.++..+++....+|+|+|+++ +++.|+++++..++. ++++++.+|+++++++ +
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~-~~v~~~~~d~~~~~~~-~ 115 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVIPGKVEEVSLP-E 115 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCT-TTEEEEESCTTTCCCS-S
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCC-CcEEEEEcchhhCCCC-C
Confidence 344444443 47789999999999999999876566999999996 889999999888874 5899999999988765 6
Q ss_pred cccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEe
Q 022248 194 SVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+||+|++...++++. +....+.++.++|||||.+++..
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 899999998877763 45678889999999999998643
No 158
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=1.7e-15 Score=127.23 Aligned_cols=115 Identities=11% Similarity=0.006 Sum_probs=84.8
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD 192 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 192 (300)
+...+++.+. .++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++.... .+..+...+.......+
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~---v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRC---VTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSC---CEEEECCTTSCCCGGGT
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhcc---ceeeeeecccccccccC
Confidence 3344444444 56789999999999999999875 6699999999999999999864331 12333222220011125
Q ss_pred CcccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEEEecc
Q 022248 193 ASVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
++||+|++..+++|+. +...+++++.++| |||++++....
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 7899999999999874 4567899999999 99999998654
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.62 E-value=1.2e-14 Score=119.80 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=94.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC---CCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---VSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+.+..+.. .++.++.+|+.... ...+.||+|
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccccchhhhccccceEEE
Confidence 57899999999999999999873 4679999999999976665554443 48999999987642 124689999
Q ss_pred EEcccccCcccHHHHH-HHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEE
Q 022248 199 VGTLVLCSVKDVDMTL-QEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSV 277 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 277 (300)
++.... ++....+ ..+.+.|||||+|+++......+.. .. .....++..+.|+++||+.+
T Consensus 151 ~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t--------~~--------~~e~~~~~~~~L~~~gf~~~ 211 (232)
T 3id6_C 151 YVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVT--------KD--------PKEIYKTEVEKLENSNFETI 211 (232)
T ss_dssp EECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC---------------CC--------SSSSTTHHHHHHHHTTEEEE
T ss_pred EecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccC--------CC--------HHHHHHHHHHHHHHCCCEEE
Confidence 987654 4555544 5566699999999998532211100 00 00111356677889999988
Q ss_pred EEeee
Q 022248 278 ELGNA 282 (300)
Q Consensus 278 ~~~~~ 282 (300)
+....
T Consensus 212 ~~~~l 216 (232)
T 3id6_C 212 QIINL 216 (232)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 77643
No 160
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.62 E-value=5e-15 Score=122.43 Aligned_cols=130 Identities=12% Similarity=0.060 Sum_probs=101.8
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
.+.+++.+|||||||+|.++..++... ..+++++|+++.+++.|+++++..++. +++++..+|..+...+++.||+|+
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~I~v~~gD~l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT-EQIDVRKGNGLAVIEKKDAIDTIV 95 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGGCCGGGCCCEEE
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEecchhhccCccccccEEE
Confidence 334577899999999999999998753 558999999999999999999999985 579999999877654434699988
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
...+.- .-...++.+..+.|+++|+|++..... .+.+++.|.+.||.+++.
T Consensus 96 iagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~~~---------------------------~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 96 IAGMGG--TLIRTILEEGAAKLAGVTKLILQPNIA---------------------------AWQLREWSEQNNWLITSE 146 (244)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCCEEEEEESSC---------------------------HHHHHHHHHHHTEEEEEE
T ss_pred EeCCch--HHHHHHHHHHHHHhCCCCEEEEEcCCC---------------------------hHHHHHHHHHCCCEEEEE
Confidence 643222 234567889999999999999876321 137778888899997554
Q ss_pred e
Q 022248 280 G 280 (300)
Q Consensus 280 ~ 280 (300)
.
T Consensus 147 ~ 147 (244)
T 3gnl_A 147 A 147 (244)
T ss_dssp E
T ss_pred E
Confidence 4
No 161
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.62 E-value=2.3e-15 Score=134.76 Aligned_cols=119 Identities=14% Similarity=0.204 Sum_probs=92.6
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHH-------HHHHHHcCCCCCCEEEEecc
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYA-------QTAAVAAGLPLTNFKFLQAV 184 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a-------~~~~~~~~~~~~~~~~~~~d 184 (300)
....+++.+. .++.+|||||||+|.++..+++. +..+++|+|+++.+++.| +++++..++...+++++.+|
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 4445555544 46789999999999999999874 445899999999999988 88888777433589999875
Q ss_pred cCcC--CC--CCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 185 GEAI--PV--SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 185 ~~~~--~~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.... ++ ..+.||+|+++..+ +.++....++++.++|||||++++.+..
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 4422 22 24789999997766 3477888899999999999999997643
No 162
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.62 E-value=3.6e-15 Score=126.24 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=83.2
Q ss_pred CCCeEEEECCCCCh----hHHHhHhC-C----CceEEEEcCCHHHHHHHHHHHHH-----------------------cC
Q 022248 125 KAKKVLEIGIGTGP----NLKYYAAD-T----DVQVLGVDPNRKMEKYAQTAAVA-----------------------AG 172 (300)
Q Consensus 125 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~~~~giD~s~~~~~~a~~~~~~-----------------------~~ 172 (300)
++.+|||+|||+|. ++..+++. + +.+++|+|+|+.|++.|++.+-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 44445542 2 46999999999999999986410 00
Q ss_pred -C--C---CCCEEEEecccCcCCCC-CCcccEEEEcccccCcccH--HHHHHHHHHcccCCcEEEE
Q 022248 173 -L--P---LTNFKFLQAVGEAIPVS-DASVDAVVGTLVLCSVKDV--DMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 173 -~--~---~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~ 229 (300)
+ . ..++.|.++|+.+.+++ .+.||+|+|.++++|+++. ..+++++++.|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0 0 02699999999887665 5789999999999999765 7899999999999999988
No 163
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.61 E-value=7.1e-15 Score=120.35 Aligned_cols=129 Identities=12% Similarity=0.022 Sum_probs=100.7
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEE
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAV 198 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v 198 (300)
.+.+++.+|||||||+|.++..++.. +..+++++|+++.+++.|+++++..++. +++++..+|... ++. .+.||+|
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~-~~i~~~~~d~l~~l~~-~~~~D~I 88 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK-EKIQVRLANGLAAFEE-TDQVSVI 88 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCT-TTEEEEECSGGGGCCG-GGCCCEE
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEECchhhhccc-CcCCCEE
Confidence 34457789999999999999999875 3568999999999999999999999985 579999999843 432 2269998
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEE
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVE 278 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 278 (300)
+...+-- .-...++.+..+.|+|+|+|++..... .+.+++.|.+.||.+++
T Consensus 89 viaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~~~---------------------------~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 89 TIAGMGG--RLIARILEEGLGKLANVERLILQPNNR---------------------------EDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EEEEECH--HHHHHHHHHTGGGCTTCCEEEEEESSC---------------------------HHHHHHHHHHTTEEEEE
T ss_pred EEcCCCh--HHHHHHHHHHHHHhCCCCEEEEECCCC---------------------------HHHHHHHHHHCCCEEEE
Confidence 8654321 224678899999999999988855311 13777888899999776
Q ss_pred Ee
Q 022248 279 LG 280 (300)
Q Consensus 279 ~~ 280 (300)
..
T Consensus 140 e~ 141 (225)
T 3kr9_A 140 ES 141 (225)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 164
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.61 E-value=9.8e-15 Score=120.35 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCCeEEEECCCCChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-C--C-CCcccE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-V--S-DASVDA 197 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~--~-~~~~D~ 197 (300)
++.+|||||||+|..+..+++.. +.+++++|+++.+++.|++++...++. .+++++.+|+.+. + + . .+.||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN-DRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 67899999999999999998742 679999999999999999999988875 4699999998653 1 1 1 267999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|++... ......+++++.++|+|||++++.+..
T Consensus 137 v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998754 345678899999999999988886643
No 165
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.61 E-value=1.9e-14 Score=122.21 Aligned_cols=147 Identities=13% Similarity=0.074 Sum_probs=97.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEE-ecccCcCC---CCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFL-QAVGEAIP---VSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~d~~~~~---~~~~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++....+|+|+|+++.|++.+.+.. +++... ..++..++ ++..+||+|+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-------~rv~~~~~~ni~~l~~~~l~~~~fD~v~ 156 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-------DRVRSMEQYNFRYAEPVDFTEGLPSFAS 156 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-------TTEEEECSCCGGGCCGGGCTTCCCSEEE
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-------cccceecccCceecchhhCCCCCCCEEE
Confidence 357799999999999999998875669999999999998854421 244332 34444433 3445699999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
+..+++++ ..++.+++++|||||.++++.....+.+.. .+.+ ...... ........+++.++++++||.+..+
T Consensus 157 ~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~--~~~~-~G~vrd-~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 157 IDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAGRE--QIGK-NGIVRE-SSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp ECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGG--GCC--CCCCCC-HHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccChh--hcCC-CCccCC-HHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 98887755 667999999999999999974221111100 0000 000000 0001124568999999999998888
Q ss_pred eeecc
Q 022248 280 GNAFL 284 (300)
Q Consensus 280 ~~~~~ 284 (300)
....+
T Consensus 230 ~~spi 234 (291)
T 3hp7_A 230 DFSPI 234 (291)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 76555
No 166
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.61 E-value=1.3e-15 Score=133.48 Aligned_cols=154 Identities=16% Similarity=0.133 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcC-------CC--CCCEEEEecccCcC--CC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAG-------LP--LTNFKFLQAVGEAI--PV 190 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~-------~~--~~~~~~~~~d~~~~--~~ 190 (300)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++...+ +. ..+++++.+|+.+. ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 47789999999999999999874 33799999999999999999987532 10 14899999999876 56
Q ss_pred CCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhh----hhhcCCcccc----
Q 022248 191 SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQ----QIVSDGCHLT---- 262 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---- 262 (300)
+++.||+|++.. +++..++.++.++|+|||++++..............+...-..+. .......+..
T Consensus 184 ~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~ 258 (336)
T 2b25_A 184 KSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAK 258 (336)
T ss_dssp ----EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC--
T ss_pred CCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEecccceEEEeec
Confidence 677899999853 333447899999999999999887533221122222211100000 0000011111
Q ss_pred ---hHHHHHHHhcCCcEEEEeee
Q 022248 263 ---RQTGNNISEAGFSSVELGNA 282 (300)
Q Consensus 263 ---~~~~~~l~~aGf~~v~~~~~ 282 (300)
.++.+.|+++||+.+++...
T Consensus 259 ~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 259 QKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp -----------------------
T ss_pred ccccchhhhhccccccccccccc
Confidence 27888999999998887654
No 167
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.61 E-value=2.4e-14 Score=122.35 Aligned_cols=137 Identities=14% Similarity=0.034 Sum_probs=98.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcC-CHHHHHHHHHHH-----HHcCCC---CCCEEEEecccCcCC--C--
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDP-NRKMEKYAQTAA-----VAAGLP---LTNFKFLQAVGEAIP--V-- 190 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~-s~~~~~~a~~~~-----~~~~~~---~~~~~~~~~d~~~~~--~-- 190 (300)
.++.+|||+|||+|.++..++.....+|+++|+ ++.+++.|++++ +..++. .+++.+...+..+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467899999999999999888754449999999 899999999998 444431 026777755543321 1
Q ss_pred --CCCcccEEEEcccccCcccHHHHHHHHHHccc---C--CcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccch
Q 022248 191 --SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLK---P--GGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTR 263 (300)
Q Consensus 191 --~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (300)
.+++||+|++..++++.++...+++.+.++|+ | ||+++++....... + .....
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~------~--------------~~~~~ 217 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH------L--------------AERDL 217 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC----------------------------CT
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc------c--------------chhHH
Confidence 35789999999999999999999999999999 9 99987754221110 0 00123
Q ss_pred HHHHHHHhcC-CcEEEEe
Q 022248 264 QTGNNISEAG-FSSVELG 280 (300)
Q Consensus 264 ~~~~~l~~aG-f~~v~~~ 280 (300)
++.+.++++| |+++.+.
T Consensus 218 ~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 218 AFFRLVNADGALIAEPWL 235 (281)
T ss_dssp HHHHHHHHSTTEEEEEEE
T ss_pred HHHHHHHhcCCEEEEEec
Confidence 6677888999 9987774
No 168
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=2.3e-15 Score=133.49 Aligned_cols=114 Identities=16% Similarity=0.133 Sum_probs=91.0
Q ss_pred HHhhc-CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCC-CCCEEEEecccCcCCCCCCcc
Q 022248 119 FDNLR-GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLP-LTNFKFLQAVGEAIPVSDASV 195 (300)
Q Consensus 119 ~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~ 195 (300)
++.+. .++.+|||+|||+|.++..+++. ++.+++++|+++.+++.++++++..++. ..+++|+.+|+.+ ++++++|
T Consensus 215 l~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~f 293 (375)
T 4dcm_A 215 MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRF 293 (375)
T ss_dssp HHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCE
T ss_pred HHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCe
Confidence 33443 34589999999999999999874 4789999999999999999999888753 1258899999877 5567899
Q ss_pred cEEEEcccccCcc-----cHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVK-----DVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+++..+++.. ....+++++.++|||||+++++...
T Consensus 294 D~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 294 NAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred eEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 9999988877532 2246899999999999999998743
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.60 E-value=9.9e-15 Score=124.46 Aligned_cols=127 Identities=18% Similarity=0.225 Sum_probs=103.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|+++++..++. +++.++.+|+.+. ++++.||+|++.
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI-ERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG-GGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-CCEEEEECCHHHc-ccCCccCEEEEC
Confidence 46789999999999999999875 3679999999999999999999887763 4799999998776 566789999983
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
.+++..+++++.++|+|||.+++...... . ..++.+.|+++||..+++..
T Consensus 189 -----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~-------~------------------~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 189 -----VPDPWNYIDKCWEALKGGGRFATVCPTTN-------Q------------------VQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp -----CSCGGGTHHHHHHHEEEEEEEEEEESSHH-------H------------------HHHHHHHHHHSSEEEEEEEC
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeCCHH-------H------------------HHHHHHHHHHCCCceeEEEE
Confidence 45667889999999999999999884210 0 12566778889999877754
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 239 ~ 239 (277)
T 1o54_A 239 S 239 (277)
T ss_dssp C
T ss_pred E
Confidence 3
No 170
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.60 E-value=1.5e-15 Score=133.41 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=89.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.+++++...++ .+.++.+|+...+ +++||+|+++.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~---~~~~~~~d~~~~~--~~~fD~Iv~~~ 269 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV---EGEVFASNVFSEV--KGRFDMIISNP 269 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC---CCEEEECSTTTTC--CSCEEEEEECC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CCEEEEccccccc--cCCeeEEEECC
Confidence 35679999999999999999874 456999999999999999999988775 3577888886643 67999999998
Q ss_pred cccC-----cccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 203 VLCS-----VKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 203 ~l~~-----~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.+++ ..+...+++++.++|||||.++++....
T Consensus 270 ~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 270 PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 8875 3456789999999999999999987543
No 171
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=9.3e-15 Score=119.75 Aligned_cols=102 Identities=24% Similarity=0.191 Sum_probs=86.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...++. ++.++.+|+......+++||+|++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD--NVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT--TEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CeEEEECCcccCCCCCCCeeEEEEC
Confidence 467899999999999999998743 379999999999999999999887764 7999999985432235789999999
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.++++++ .++.++|||||++++....
T Consensus 154 ~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 154 AAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 9999886 5899999999999998743
No 172
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=1e-14 Score=120.44 Aligned_cols=150 Identities=19% Similarity=0.179 Sum_probs=104.2
Q ss_pred HHHHhhcCCCCchhHHHHHHHHH-hhhh--HhHHHHHHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC--CCceEE
Q 022248 78 MAMLNRLHPPRPDWYEEFYASVM-NSSM--KSYEAEVAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD--TDVQVL 152 (300)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~ 152 (300)
.+++..........+.+...... .... .........++..+.... ++.+|||||||+|..+..+++. .+.+++
T Consensus 16 ~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~~~vLdiG~G~G~~~~~la~~~~~~~~v~ 93 (225)
T 3tr6_A 16 YQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLM--QAKKVIDIGTFTGYSAIAMGLALPKDGTLI 93 (225)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHHH--TCSEEEEECCTTSHHHHHHHTTCCTTCEEE
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHhh--CCCEEEEeCCcchHHHHHHHHhCCCCCEEE
Confidence 44455544444455544444332 1111 111122333444444332 6779999999999999999874 268999
Q ss_pred EEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-CC----CCcccEEEEcccccCcccHHHHHHHHHHcccCCcE
Q 022248 153 GVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-VS----DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGI 226 (300)
Q Consensus 153 giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 226 (300)
++|+++.+++.|+++++..++. .+++++.+|+.+. + +. .++||+|++... ..+...+++++.++|||||+
T Consensus 94 ~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~ 169 (225)
T 3tr6_A 94 TCDVDEKSTALAKEYWEKAGLS-DKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGL 169 (225)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEE
T ss_pred EEeCCHHHHHHHHHHHHHCCCC-CceEEEeCCHHHHHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcE
Confidence 9999999999999999988875 5699999998553 2 11 178999997543 34677889999999999999
Q ss_pred EEEEecc
Q 022248 227 YLFVEHV 233 (300)
Q Consensus 227 l~~~~~~ 233 (300)
+++.+..
T Consensus 170 lv~~~~~ 176 (225)
T 3tr6_A 170 IAVDNVL 176 (225)
T ss_dssp EEEECSS
T ss_pred EEEeCCC
Confidence 9997644
No 173
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=3e-16 Score=131.07 Aligned_cols=102 Identities=19% Similarity=0.225 Sum_probs=90.5
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|++++...++. +++.++++|+..++ ++++||+|++...+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIA-DKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC-cCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 6789999999999999999975 579999999999999999999988863 48999999998876 56899999999999
Q ss_pred cCcccHHHHHHHHHHcccCCcEEEE
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
++..+....+.++.++|+|||.+++
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHH
Confidence 9887776677889999999998555
No 174
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.59 E-value=6.1e-15 Score=116.65 Aligned_cols=98 Identities=20% Similarity=0.306 Sum_probs=82.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--------CCCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--------VSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~ 193 (300)
.++.+|||+|||+|.++..+++. ++.+++++|+++ +++. .++.++.+|+...+ ++++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccchhhhhhhccCCCC
Confidence 46789999999999999999875 357999999999 6532 37899999998876 6778
Q ss_pred cccEEEEcccccCcccH-----------HHHHHHHHHcccCCcEEEEEeccc
Q 022248 194 SVDAVVGTLVLCSVKDV-----------DMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+||+|++...+++..+. ..+++++.++|+|||.+++..+..
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 99999998888877554 688999999999999999987543
No 175
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=128.13 Aligned_cols=103 Identities=25% Similarity=0.317 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc--
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT-- 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-- 201 (300)
.++++|||||||+|.++..+++....+|++||.|+ +++.|++.++.+++. ++|+++.++++++.++ +.||+|++-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~-~~i~~i~~~~~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLE-DRVHVLPGPVETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCT-TTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCC-ceEEEEeeeeeeecCC-ccccEEEeecc
Confidence 37889999999999999888776566899999986 889999999999986 6899999999998876 789999984
Q ss_pred -ccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 202 -LVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 202 -~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
..+.+-.....++....++|||||.++-
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccchhhhHHHHHHhhCCCCceECC
Confidence 3444445677888999999999999875
No 176
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.59 E-value=1.5e-14 Score=125.74 Aligned_cols=102 Identities=25% Similarity=0.226 Sum_probs=88.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||||||+|.++..+++. . ..+|+|+|+++.+++.|+++++..++. +++++.+|+.+.+..+++||+|++.
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~--~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE--NVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CeEEEECChhhccccCCCeEEEEEc
Confidence 46789999999999999999874 2 357999999999999999999888874 6999999998865456789999999
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.+++++. +++.++|||||++++....
T Consensus 152 ~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 152 VGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 9999986 6788999999999997643
No 177
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.59 E-value=4e-15 Score=139.14 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=93.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~ 201 (300)
.++.+|||||||.|.++..|++ .+++|+|||+++.+++.|+.++.+.+.. +++|.+++++++ .+.+++||+|+|.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~-~ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLAS-KGATIVGIDFQQENINVCRALAEENPDF--AAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHh-CCCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECCHHHHhhhccCCCccEEEEC
Confidence 3678999999999999999997 4789999999999999999999877642 799999999987 4667899999999
Q ss_pred ccccCcccHHH--HHHHHHHcccCCcEEEEEecccCC
Q 022248 202 LVLCSVKDVDM--TLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 202 ~~l~~~~~~~~--~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
.+++|++++.. .+..+.+.|+++|..++......+
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 99999988753 356677888998888887765544
No 178
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.58 E-value=1e-14 Score=120.87 Aligned_cols=100 Identities=29% Similarity=0.267 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++.. .+++|+|+++.+++.++++....+ ++.++.+|+......+++||+|++..+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~v~~~~~ 143 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN----NIKLILGDGTLGYEEEKPYDRVVVWAT 143 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCcccccccCCCccEEEECCc
Confidence 467899999999999999998754 799999999999999999876543 789999999773334578999999999
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
++++. .++.++|+|||++++.....
T Consensus 144 ~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 144 APTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp BSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred HHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 99886 47899999999999987543
No 179
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.58 E-value=4.6e-15 Score=130.18 Aligned_cols=104 Identities=20% Similarity=0.258 Sum_probs=84.5
Q ss_pred HHHhhcCCCCeEEEECCC------CChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 118 LFDNLRGKAKKVLEIGIG------TGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 118 ~~~~~~~~~~~vLDiGcG------~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
++..+..++.+||||||| +|..+..+++. ++.+++|+|+++.|.. . .++++|+++|+.+++
T Consensus 209 lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~---------~--~~rI~fv~GDa~dlp 277 (419)
T 3sso_A 209 HFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV---------D--ELRIRTIQGDQNDAE 277 (419)
T ss_dssp HHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG---------C--BTTEEEEECCTTCHH
T ss_pred HHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh---------c--CCCcEEEEecccccc
Confidence 344444567899999999 67667666653 6789999999998721 1 258999999999988
Q ss_pred CC------CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 190 VS------DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 190 ~~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+. +++||+|++.. .+++.+....|++++++|||||++++.+..
T Consensus 278 f~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 278 FLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred hhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 76 68999999875 467788889999999999999999998765
No 180
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=2.3e-14 Score=121.02 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH---cCCCCCCEEEEecccCcC-------CCCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA---AGLPLTNFKFLQAVGEAI-------PVSD 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~---~~~~~~~~~~~~~d~~~~-------~~~~ 192 (300)
.++.+|||+|||+|.++..++.. +..+++|+|+++.+++.|++++.. .++. +++.++.+|+.+. ++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~-~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFS-ARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-GGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-ceEEEEeCCHHHHhhhhhhhccCC
Confidence 35679999999999999999875 467999999999999999999877 6663 4699999999876 3567
Q ss_pred CcccEEEEcccccCc------------------ccHHHHHHHHHHcccCCcEEEEEe
Q 022248 193 ASVDAVVGTLVLCSV------------------KDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++||+|+++-..... .+...+++.+.++|||||+++++.
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 899999997322211 236778999999999999999975
No 181
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.57 E-value=2.3e-14 Score=124.28 Aligned_cols=109 Identities=17% Similarity=0.196 Sum_probs=88.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|..+..+++. ...+++++|+++.+++.++++++..++. ++.++.+|+..++..++.||+|++.
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~--~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL--NVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC--SEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC--eEEEEECChhhcccccccCCEEEEe
Confidence 46789999999999999999874 3479999999999999999999988874 7999999998876556789999984
Q ss_pred ------ccccCccc----------------HHHHHHHHHHcccCCcEEEEEeccc
Q 022248 202 ------LVLCSVKD----------------VDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 202 ------~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.++...++ ...+++++.++|||||++++++...
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 22332222 1478999999999999999987543
No 182
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=7e-15 Score=115.84 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=84.3
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-C--CCCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-V--SDASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~--~~~~~D~v~~ 200 (300)
++.+|||+|||+|.++..+++. +..++|+|+++.+++.|++++...++ +++++.+|+.+. + . ..++||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL---GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC---CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC---ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 6789999999999999999875 44599999999999999999988765 789999998763 2 1 1347999999
Q ss_pred cccccCcccHHHHHHHHH--HcccCCcEEEEEeccc
Q 022248 201 TLVLCSVKDVDMTLQEVR--RVLKPGGIYLFVEHVA 234 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 234 (300)
...++ .+....++.+. ++|+|||++++.....
T Consensus 117 ~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 117 APPYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 87654 44555666666 9999999999987544
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.57 E-value=1.2e-13 Score=118.35 Aligned_cols=109 Identities=19% Similarity=0.254 Sum_probs=83.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcC---CCCCCEEEEecccCcC-CCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAG---LPLTNFKFLQAVGEAI-PVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~---~~~~~~~~~~~d~~~~-~~~~~~~D~v 198 (300)
+++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++...+ +..++++++.+|+... ...+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 46789999999999999999875 45689999999999999999876542 2335899999998764 4456889999
Q ss_pred EEcccccCcccH----HHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDV----DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
++.......+.. ..+++++.++|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 996543322221 6789999999999999999653
No 184
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.57 E-value=1e-14 Score=120.86 Aligned_cols=146 Identities=14% Similarity=0.049 Sum_probs=90.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEE-ecccCcC---CCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFL-QAVGEAI---PVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~d~~~~---~~~~~~~D~v~ 199 (300)
.++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++.. ++... ..++..+ .+....||.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE-------RVVVMEQFNFRNAVLADFEQGRPSFTS 108 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT-------TEEEECSCCGGGCCGGGCCSCCCSEEE
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc-------cccccccceEEEeCHhHcCcCCCCEEE
Confidence 3567999999999999999988644599999999999998776532 22221 1122111 11112245555
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhh--hhcCCcccchHHHHHHHhcCCcEE
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQ--IVSDGCHLTRQTGNNISEAGFSSV 277 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGf~~v 277 (300)
+..++.++ ..++.++.++|||||++++..... +...+.. ...... .......+.+++.++++++||+++
T Consensus 109 ~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~~p~-----~e~~~~~-~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~ 179 (232)
T 3opn_A 109 IDVSFISL---DLILPPLYEILEKNGEVAALIKPQ-----FEAGREQ-VGKNGIIRDPKVHQMTIEKVLKTATQLGFSVK 179 (232)
T ss_dssp ECCSSSCG---GGTHHHHHHHSCTTCEEEEEECHH-----HHSCHHH-HC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred EEEEhhhH---HHHHHHHHHhccCCCEEEEEECcc-----cccCHHH-hCcCCeecCcchhHHHHHHHHHHHHHCCCEEE
Confidence 54444443 567999999999999999964111 1100100 000000 000012356799999999999998
Q ss_pred EEeeeccC
Q 022248 278 ELGNAFLS 285 (300)
Q Consensus 278 ~~~~~~~~ 285 (300)
.+....+.
T Consensus 180 ~~~~~pi~ 187 (232)
T 3opn_A 180 GLTFSPIK 187 (232)
T ss_dssp EEEECSSC
T ss_pred EEEEccCC
Confidence 88765553
No 185
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.57 E-value=3.8e-14 Score=118.68 Aligned_cols=106 Identities=20% Similarity=0.315 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHc--------CCCCCCEEEEecccCc-CC--CC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAA--------GLPLTNFKFLQAVGEA-IP--VS 191 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~--------~~~~~~~~~~~~d~~~-~~--~~ 191 (300)
.++.+|||||||+|.++..+++. +...++|+|+++.+++.++++++.. ++ .++.++.+|+.+ ++ ++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~--~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF--QNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT--TTEEEEECCTTSCGGGTSC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC--CcEEEEeccHHHHHHHhcc
Confidence 36779999999999999999874 4568999999999999999988765 55 489999999986 55 77
Q ss_pred CCcccEEEEcccccCcccH--------HHHHHHHHHcccCCcEEEEEe
Q 022248 192 DASVDAVVGTLVLCSVKDV--------DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~~~--------~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++.+|.|+..+.-.+.... ..++.++.++|+|||+|++..
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 8899999865422211110 478999999999999999965
No 186
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.56 E-value=1.7e-14 Score=123.04 Aligned_cols=104 Identities=22% Similarity=0.260 Sum_probs=89.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHc-C-CCCCCEEEEecccCcCCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAA-G-LPLTNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~-~-~~~~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.|++++... + +. +++.++.+|+.+.+++++.||+|+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~-~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP-DNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC-TTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC-CcEEEEECchHhcCCCCCceeEEE
Confidence 46789999999999999999874 4679999999999999999998876 4 22 589999999998888788999999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+. ++++..+++++.++|+|||++++..+.
T Consensus 177 ~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 177 LD-----MLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EE-----SSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EC-----CcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 83 356667899999999999999998853
No 187
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=2.2e-14 Score=119.34 Aligned_cols=101 Identities=19% Similarity=0.251 Sum_probs=85.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-CcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-ASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 202 (300)
.++.+|||||||+|.++..+++..+.+++++|+++.+++.|++++...++. ++.++.+|+ ..++++ +.||+|++..
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~v~~~~~d~-~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK--NVHVILGDG-SKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCG-GGCCGGGCCEEEEEECS
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC--CcEEEECCc-ccCCCCCCCccEEEECC
Confidence 467899999999999999998743379999999999999999999888764 699999997 344443 3599999999
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+++++. .++.++|+|||++++....
T Consensus 167 ~~~~~~------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 167 GAPKIP------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred cHHHHH------HHHHHhcCCCcEEEEEEec
Confidence 998875 4789999999999998754
No 188
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.56 E-value=4.3e-14 Score=117.81 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=103.0
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHhhhhH--hHHHHHHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCC--CceEEE
Q 022248 78 MAMLNRLHPPRPDWYEEFYASVMNSSMK--SYEAEVAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADT--DVQVLG 153 (300)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~~~g 153 (300)
.+++........+.+.+........... ...+.....+..++.. .++.+|||||||+|..+..+++.. +.++++
T Consensus 13 ~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~ 90 (239)
T 2hnk_A 13 EEYIFRNSVREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKI--SGAKRIIEIGTFTGYSSLCFASALPEDGKILC 90 (239)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHH--HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHh--hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEE
Confidence 4555555444455555444433222111 1112223333343332 367899999999999999998743 679999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C--------------CCC--CcccEEEEcccccCcccHHHHHHH
Q 022248 154 VDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P--------------VSD--ASVDAVVGTLVLCSVKDVDMTLQE 216 (300)
Q Consensus 154 iD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~--------------~~~--~~~D~v~~~~~l~~~~~~~~~l~~ 216 (300)
+|+++.+++.|++++...++. .++.++.+|+... + |++ ++||+|++... ..+...++++
T Consensus 91 vD~~~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~ 166 (239)
T 2hnk_A 91 CDVSEEWTNVARKYWKENGLE-NKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPL 166 (239)
T ss_dssp EESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCC-CCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHH
Confidence 999999999999999888764 4699999997552 2 222 78999998754 3456688999
Q ss_pred HHHcccCCcEEEEEec
Q 022248 217 VRRVLKPGGIYLFVEH 232 (300)
Q Consensus 217 ~~~~LkpgG~l~~~~~ 232 (300)
+.++|+|||++++.+.
T Consensus 167 ~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 167 ILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHEEEEEEEEEECS
T ss_pred HHHHcCCCeEEEEEcc
Confidence 9999999999999763
No 189
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.56 E-value=1.6e-14 Score=131.88 Aligned_cols=113 Identities=19% Similarity=0.270 Sum_probs=93.1
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD 192 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 192 (300)
+...+++.+. .++.+|||||||+|.++..+++.+..+|+|+|+++ +++.|+++++..++. ++++++.+|+++++++
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~-~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLT-DRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCT-TTEEEEESCTTTCCCS-
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCC-CcEEEEECchhhCccC-
Confidence 3444444443 46789999999999999999886667999999998 999999999988875 5899999999987765
Q ss_pred CcccEEEEcccccCcc--cHHHHHHHHHHcccCCcEEEE
Q 022248 193 ASVDAVVGTLVLCSVK--DVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~ 229 (300)
++||+|++...++++. +....+.++.++|||||++++
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 6899999987767663 446678899999999999986
No 190
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=4.1e-14 Score=117.44 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=87.4
Q ss_pred CCCeEEEECCCCChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc----CCCCC--Cccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA----IPVSD--ASVD 196 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~----~~~~~--~~~D 196 (300)
++.+|||||||+|..+..+++.. +.+++++|+++.+++.|+++++..++. .+++++.+|+.+ ++..+ ++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA-EKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 56799999999999999998742 579999999999999999999888874 579999999754 23333 7899
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|++... ..+...+++++.++|+|||++++.+..
T Consensus 151 ~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 151 LIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 9998654 356778899999999999999997643
No 191
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.56 E-value=3.1e-15 Score=124.97 Aligned_cols=115 Identities=19% Similarity=0.111 Sum_probs=92.6
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P 189 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~ 189 (300)
.++..++.. .++.+|||||||+|..+..+++. .+.+++++|+++.+++.|+++++..++. ++++++.+|+.+. +
T Consensus 50 ~~l~~l~~~--~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~ 126 (242)
T 3r3h_A 50 QFMQMLIRL--TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE-HKIKLRLGPALDTLH 126 (242)
T ss_dssp HHHHHHHHH--HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT-TTEEEEESCHHHHHH
T ss_pred HHHHHHHhh--cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH
Confidence 344444433 25679999999999999999874 3679999999999999999999998875 5899999998664 2
Q ss_pred CC-----CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 190 VS-----DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 190 ~~-----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.. +++||+|++... ..+...+++++.++|||||++++.+..
T Consensus 127 ~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 127 SLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 21 478999998654 356677899999999999999996644
No 192
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.56 E-value=3e-14 Score=117.66 Aligned_cols=105 Identities=19% Similarity=0.202 Sum_probs=87.4
Q ss_pred cCCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCC---CCCCEEEEecccCcCCCCCCcccE
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGL---PLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
..++.+|||+|||+|.++..+++. ...+++++|+++.+++.+++++...++ ..+++.++.+|+...+..++.||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 356789999999999999999874 336999999999999999999887553 124799999998876555678999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|++...++++ ++++.++|||||++++....
T Consensus 155 i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 9999888776 37899999999999997743
No 193
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=5.5e-14 Score=122.62 Aligned_cols=109 Identities=20% Similarity=0.207 Sum_probs=87.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----CCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV----SDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v~ 199 (300)
.++.+|||+|||+|.++..++.. +.+|+++|+|+.+++.|+++++..++...++.++++|+.++.. .++.||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 35679999999999999999875 4499999999999999999999888752259999999876531 146899999
Q ss_pred Eccc----------ccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 200 GTLV----------LCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 200 ~~~~----------l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+.-- .+...+...++.++.++|+|||++++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 8421 123345678899999999999998876643
No 194
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=2.4e-14 Score=118.32 Aligned_cols=104 Identities=13% Similarity=0.163 Sum_probs=87.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC------CceEEEEcCCHHHHHHHHHHHHHcCC---CCCCEEEEecccCcCC----C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT------DVQVLGVDPNRKMEKYAQTAAVAAGL---PLTNFKFLQAVGEAIP----V 190 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~~~giD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~~~----~ 190 (300)
.++.+|||||||+|.++..+++.. ..+++++|+++.+++.|++++...++ ...++.++.+|+.... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 567899999999999999998743 36999999999999999999887762 1248999999998754 4
Q ss_pred CCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 191 SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
..++||+|++...++++ ++++.++|||||++++....
T Consensus 159 ~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 56789999999988876 48889999999999998743
No 195
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.54 E-value=3.1e-13 Score=114.95 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=85.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHc--CCCCCCEEEEecccCc-CCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAA--GLPLTNFKFLQAVGEA-IPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~-~~~~~~~~D~v~ 199 (300)
+.+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++... ++..++++++.+|+.. ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 36789999999999999999876 4579999999999999999987542 3434689999999866 344457899999
Q ss_pred EcccccCccc----HHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVKD----VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.......+. ...+++++.++|+|||++++..
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9654322111 2578999999999999999865
No 196
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.54 E-value=2e-13 Score=112.76 Aligned_cols=101 Identities=14% Similarity=0.159 Sum_probs=81.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC---CCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---VSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v 198 (300)
.++.+|||+|||+|.++..+++. +..+++|+|+++.+++.++++++.. +++.++.+|+.... ...++||+|
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCCCcchhhcccCCceEE
Confidence 46789999999999999999874 3479999999999999998887543 48999999997732 123689999
Q ss_pred EEcccccCcccHH-HHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVD-MTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~-~~l~~~~~~LkpgG~l~~~~ 231 (300)
++... .++.. .++.++.++|||||++++..
T Consensus 148 ~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 148 FEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 98654 23343 45999999999999999983
No 197
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=6.8e-14 Score=118.89 Aligned_cols=105 Identities=19% Similarity=0.152 Sum_probs=90.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+++++..++. ++.++.+|+.+.+. .+.||+|++..
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~--~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN--NVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS--SEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEEECChHHcCc-cCCceEEEECC
Confidence 46789999999999999999875 4569999999999999999999998874 78999999988743 67899999875
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
.. +...++.++.+.|+|||++++.+....
T Consensus 195 p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 195 VH----KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp CS----SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cc----cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 43 556678999999999999999886553
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.53 E-value=2.3e-14 Score=118.51 Aligned_cols=102 Identities=12% Similarity=0.189 Sum_probs=84.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCC-------ceEEEEcCCHHHHHHHHHHHHHcCC---CCCCEEEEecccCcCCCCC-
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTD-------VQVLGVDPNRKMEKYAQTAAVAAGL---PLTNFKFLQAVGEAIPVSD- 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~-------~~~~giD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~~~~~~- 192 (300)
.++.+|||||||+|.++..+++..+ .+++++|+++.+++.|++++...+. ...++.++.+|+.. ++++
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcC
Confidence 5678999999999999999887433 5999999999999999998876541 01479999999877 3443
Q ss_pred CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 193 ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.||+|++...++++. +++.++|||||++++...
T Consensus 162 ~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 7899999999998875 789999999999999774
No 199
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.53 E-value=1.3e-13 Score=115.26 Aligned_cols=102 Identities=25% Similarity=0.248 Sum_probs=88.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++....++. ++++++.+|+.+...+++.||+|++.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~D~v~~~-- 165 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLG-KNVKFFNVDFKDAEVPEGIFHAAFVD-- 165 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCC-TTEEEECSCTTTSCCCTTCBSEEEEC--
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-CcEEEEEcChhhcccCCCcccEEEEC--
Confidence 46789999999999999999877 779999999999999999999887764 48999999988754356789999983
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.+++..+++++.++|+|||++++...
T Consensus 166 ---~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 166 ---VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ---SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ---CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 35667789999999999999999884
No 200
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.53 E-value=3.8e-14 Score=118.76 Aligned_cols=103 Identities=20% Similarity=0.241 Sum_probs=87.1
Q ss_pred CCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-C-----CCCcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-V-----SDASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~ 195 (300)
++.+|||||||+|..+..+++. + +.+++++|+++.+++.|+++++..++. ++++++.+|+.+. + + ++++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD-HKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 5679999999999999999874 2 679999999999999999999988874 5899999998653 3 2 15789
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|+|++... ..+...+++++.++|||||++++.+
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998653 3467788999999999999999865
No 201
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.52 E-value=1.1e-14 Score=122.25 Aligned_cols=108 Identities=15% Similarity=0.090 Sum_probs=83.3
Q ss_pred CCCeEEEECCCCChhHHHhHhC---CCceEEEEcCCHHHHHHHHHHHHHc---CCCCCC---------------------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD---TDVQVLGVDPNRKMEKYAQTAAVAA---GLPLTN--------------------- 177 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~---~~~~~~giD~s~~~~~~a~~~~~~~---~~~~~~--------------------- 177 (300)
++.+|||+|||+|.++..+++. .+.+++|+|+++.+++.|++++... ++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhhhh
Confidence 5679999999999999998864 3578999999999999999887644 321 11
Q ss_pred ----EE-------------EEecccCcCCC-----CCCcccEEEEcccccCcc---------cHHHHHHHHHHcccCCcE
Q 022248 178 ----FK-------------FLQAVGEAIPV-----SDASVDAVVGTLVLCSVK---------DVDMTLQEVRRVLKPGGI 226 (300)
Q Consensus 178 ----~~-------------~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~---------~~~~~l~~~~~~LkpgG~ 226 (300)
++ |+++|+.+... ..+.||+|+++....+.. ....+++++.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 89999876431 345899999976544332 345789999999999999
Q ss_pred EEEEecc
Q 022248 227 YLFVEHV 233 (300)
Q Consensus 227 l~~~~~~ 233 (300)
++++...
T Consensus 210 l~~~~~~ 216 (250)
T 1o9g_A 210 IAVTDRS 216 (250)
T ss_dssp EEEEESS
T ss_pred EEEeCcc
Confidence 9996543
No 202
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.52 E-value=2.8e-13 Score=116.38 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=83.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH--cCCCCCCEEEEecccCc-CCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA--AGLPLTNFKFLQAVGEA-IPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~ 199 (300)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .++..++++++.+|+.. ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999876 457999999999999999998754 23323589999999866 344467899999
Q ss_pred EcccccCcc-----cHHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVK-----DVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.....++. ....+++++.++|+|||++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 853321121 12678999999999999999965
No 203
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.52 E-value=2.3e-13 Score=118.18 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=84.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH--cCCCCCCEEEEecccCcC-CCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA--AGLPLTNFKFLQAVGEAI-PVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~ 199 (300)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .++..++++++.+|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35689999999999999999875 467999999999999999998754 223235899999998663 33457899999
Q ss_pred EcccccC--cccH--HHHHHHHHHcccCCcEEEEEec
Q 022248 200 GTLVLCS--VKDV--DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 200 ~~~~l~~--~~~~--~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+...... .... ..+++++.++|+|||++++...
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8643211 1111 6789999999999999999653
No 204
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.52 E-value=1e-13 Score=114.58 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=86.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-CC--C--Ccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-VS--D--ASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~~--~--~~~ 195 (300)
.++.+|||+|||+|.++..+++. + +.+++++|+++.+++.|+++++..++. ++++++.+|+.+. + +. . ++|
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE-HKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-CeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 36789999999999999999874 2 679999999999999999999988874 5899999998553 1 11 1 689
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|++... ..+...+++++.++|+|||++++.+.
T Consensus 147 D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 147 DVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99998653 34567789999999999999999664
No 205
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.52 E-value=1.5e-13 Score=122.48 Aligned_cols=145 Identities=13% Similarity=0.064 Sum_probs=105.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C---CCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P---VSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~---~~~~~~D~v~ 199 (300)
.++.+|||+|||+|.++..++.....+|+++|+|+.+++.|+++++.+++...+++|+++|+.+. + ...+.||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 36789999999999999999875445899999999999999999999887522899999998663 2 1246899999
Q ss_pred Ecccc---------cCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 200 GTLVL---------CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 200 ~~~~l---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
+.--. ....+...++.++.++|+|||.+++.......... .+ .+.+.+.+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~---~~-----------------~~~i~~~~~ 350 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVS---QF-----------------KKQIEKGFG 350 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHH---HH-----------------HHHHHHHHT
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHH---HH-----------------HHHHHHHHH
Confidence 84221 12234456788889999999999998754432110 00 125566777
Q ss_pred hcCCcEEEEeeeccCCcc
Q 022248 271 EAGFSSVELGNAFLSNAS 288 (300)
Q Consensus 271 ~aGf~~v~~~~~~~~~~~ 288 (300)
++|.++++.......++.
T Consensus 351 ~~g~~~~~~~~~~~D~p~ 368 (385)
T 2b78_A 351 KQKHTYLDLQQLPSDFAV 368 (385)
T ss_dssp TCCCEEEEEECCCTTSCC
T ss_pred HcCCcEEEeCCCCCCCCC
Confidence 889986665555444443
No 206
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.51 E-value=9.4e-14 Score=132.37 Aligned_cols=138 Identities=18% Similarity=0.204 Sum_probs=105.8
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEEEEcc-
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAVVGTL- 202 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~- 202 (300)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.|+++++.+++..++++++++|+.+ ++...++||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 678999999999999999987555579999999999999999999998854589999999977 344567899999843
Q ss_pred ----------cccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 203 ----------VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 203 ----------~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
++....+...++.++.++|+|||+|++........ .-.+.|++.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~--------------------------~~~~~l~~~ 672 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR--------------------------MDLDGLAKL 672 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC--------------------------CCHHHHHHT
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc--------------------------cCHHHHHHc
Confidence 22333566788999999999999999877432111 013566778
Q ss_pred CCcEEEEeeeccCCcc
Q 022248 273 GFSSVELGNAFLSNAS 288 (300)
Q Consensus 273 Gf~~v~~~~~~~~~~~ 288 (300)
||+...+....+...+
T Consensus 673 g~~~~~i~~~~lp~df 688 (703)
T 3v97_A 673 GLKAQEITQKTLSQDF 688 (703)
T ss_dssp TEEEEECTTTTCCGGG
T ss_pred CCceeeeeeccCCCCC
Confidence 8886666555544333
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.50 E-value=3.3e-13 Score=116.91 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH--cC-CCCCCEEEEecccCc-CCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA--AG-LPLTNFKFLQAVGEA-IPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~--~~-~~~~~~~~~~~d~~~-~~~~~~~~D~v 198 (300)
+.+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .+ +..++++++.+|+.. ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 46689999999999999999875 457999999999999999998764 22 223589999999876 34446789999
Q ss_pred EEcccccC---cc--c--HHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCS---VK--D--VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~---~~--~--~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++....+. -+ . ...+++++.++|||||++++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99765543 11 1 3678999999999999999964
No 208
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.50 E-value=1.3e-13 Score=111.65 Aligned_cols=96 Identities=18% Similarity=0.242 Sum_probs=76.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----------
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------- 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------- 189 (300)
.++.+|||+|||+|.++..+++. + +.+++|+|+++.. . .+++.++++|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~--~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P--IPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C--CTTCEEEECCTTTTSSCCC-------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C--CCCceEEEccccchhhhhhccccccc
Confidence 46789999999999999999874 3 5799999999831 1 147899999998776
Q ss_pred --------------CCCCcccEEEEcccccCc----ccH-------HHHHHHHHHcccCCcEEEEEec
Q 022248 190 --------------VSDASVDAVVGTLVLCSV----KDV-------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 190 --------------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+++++||+|++...+++. .+. ..+++++.++|||||.+++..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 566799999998877653 222 2378999999999999998664
No 209
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=1.7e-13 Score=120.89 Aligned_cols=107 Identities=23% Similarity=0.193 Sum_probs=90.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+|||+|.++..++.. +..+++|+|+++.+++.|+++++..++. +++|+++|+.+++.+.+.||+|+++
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~--~i~~~~~D~~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS--WIRFLRADARHLPRFFPEVDRILAN 279 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT--TCEEEECCGGGGGGTCCCCSEEEEC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC--ceEEEeCChhhCccccCCCCEEEEC
Confidence 46789999999999999999873 4579999999999999999999999875 8999999999988777789999995
Q ss_pred ccccCc--------ccHHHHHHHHHHcccCCcEEEEEec
Q 022248 202 LVLCSV--------KDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 202 ~~l~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-..... .....+++++.++|||||.+++...
T Consensus 280 pPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 280 PPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 432211 1236789999999999999999874
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.50 E-value=1.4e-12 Score=115.70 Aligned_cols=103 Identities=12% Similarity=0.087 Sum_probs=85.4
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCC-CCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPV-SDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~~D~v~~~ 201 (300)
++.+|||+| |+|.++..++.. +..+++++|+++.+++.|+++++..++. +++++.+|+.. ++. .+++||+|+++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~--~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE--DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC--CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CEEEEEChhhhhchhhccCCccEEEEC
Confidence 578999999 999999999874 3479999999999999999999988874 89999999988 664 35789999997
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEE-EEEe
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIY-LFVE 231 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l-~~~~ 231 (300)
..+... ....+++++.++|||||++ ++..
T Consensus 249 ~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 249 PPETLE-AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCSSHH-HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCchH-HHHHHHHHHHHHcccCCeEEEEEE
Confidence 654433 3578899999999999955 4443
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.50 E-value=5.2e-13 Score=113.92 Aligned_cols=106 Identities=19% Similarity=0.166 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHc--CC-------CCCCEEEEecccCcC-CCCCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAA--GL-------PLTNFKFLQAVGEAI-PVSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~--~~-------~~~~~~~~~~d~~~~-~~~~~ 193 (300)
..+.+|||||||+|.++..+++.+..+++++|+++.+++.|++++ .. ++ ..++++++.+|+.+. +. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 466899999999999999998775569999999999999999987 33 22 236899999998653 33 57
Q ss_pred cccEEEEcccccCcc--c--HHHHHHHHHHcccCCcEEEEEe
Q 022248 194 SVDAVVGTLVLCSVK--D--VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~--~--~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+||+|++.......+ . ...+++++.++|+|||++++..
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999865432111 1 2568999999999999999864
No 212
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=1.6e-13 Score=117.29 Aligned_cols=103 Identities=21% Similarity=0.130 Sum_probs=83.7
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcc---cEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASV---DAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---D~v~~~ 201 (300)
++.+|||+|||+|.++..++..++.+++|+|+|+.+++.|+++++..++. .+++|+++|+... ++ ++| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~-~~v~~~~~D~~~~-~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVS-DRFFVRKGEFLEP-FK-EKFASIEMILSN 199 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCT-TSEEEEESSTTGG-GG-GGTTTCCEEEEC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECcchhh-cc-cccCCCCEEEEc
Confidence 56799999999999999998766779999999999999999999988874 3699999999763 22 579 999996
Q ss_pred ------------ccccCccc--------HHHHHHHHH-HcccCCcEEEEEe
Q 022248 202 ------------LVLCSVKD--------VDMTLQEVR-RVLKPGGIYLFVE 231 (300)
Q Consensus 202 ------------~~l~~~~~--------~~~~l~~~~-~~LkpgG~l~~~~ 231 (300)
.+. |-+. ...+++++. +.|+|||++++..
T Consensus 200 PPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 122 2221 236899999 9999999999843
No 213
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=6.7e-14 Score=116.43 Aligned_cols=98 Identities=13% Similarity=0.228 Sum_probs=80.3
Q ss_pred CCCeEEEECCCCChhHHHhHhC-----CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC---CCCC-Ccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-----TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI---PVSD-ASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-----~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~~~~-~~~ 195 (300)
++.+|||||||+|..+..+++. ++.+|+|+|+++.+++.|+. + .++++++++|+.+. +..+ .+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~-~~~v~~~~gD~~~~~~l~~~~~~~f 153 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------D-MENITLHQGDCSDLTTFEHLREMAH 153 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------G-CTTEEEEECCSSCSGGGGGGSSSCS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------c-CCceEEEECcchhHHHHHhhccCCC
Confidence 4679999999999999998864 46899999999999988872 1 15899999999874 5433 479
Q ss_pred cEEEEcccccCcccHHHHHHHHHH-cccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRR-VLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 232 (300)
|+|++... | .+...++.++.+ +|||||++++.+.
T Consensus 154 D~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 99998665 2 377789999997 9999999999764
No 214
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=5.3e-13 Score=112.90 Aligned_cols=132 Identities=13% Similarity=0.090 Sum_probs=102.8
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..++.+|||+|||+|.++..++.....+|+++|+++.+++.++++++.+++. ++++++.+|+.+++. .+.||.|+++.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~-~~v~~~~~D~~~~~~-~~~~D~Vi~~~ 200 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVE-DRMSAYNMDNRDFPG-ENIADRILMGY 200 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCT-TTEEEECSCTTTCCC-CSCEEEEEECC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEeCcHHHhcc-ccCCCEEEECC
Confidence 3578999999999999999998876679999999999999999999999986 689999999988763 57899999764
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEE
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVEL 279 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 279 (300)
- +....++..+.++|||||++.+.+....... .....+.+.+...+.|++...+
T Consensus 201 p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~-------------------~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 201 V----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-------------------PREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp C----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-------------------TTTTHHHHHHHHHHTTCEEEEE
T ss_pred C----CcHHHHHHHHHHHcCCCCEEEEEeeeccccc-------------------chhHHHHHHHHHHHcCCcEEEE
Confidence 2 2234567888899999999988765432210 0111236677788899985443
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.48 E-value=2.2e-13 Score=117.33 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=83.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHH--cCCCCCCEEEEecccCc-CCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVA--AGLPLTNFKFLQAVGEA-IPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~ 199 (300)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. .++..++++++.+|+.. ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 46689999999999999999875 357999999999999999998765 33323689999999866 344568899999
Q ss_pred EcccccCcc----cHHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVK----DVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.......+ ....+++++.++|+|||++++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 865432211 12468999999999999999866
No 216
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.48 E-value=4.4e-13 Score=118.94 Aligned_cols=130 Identities=23% Similarity=0.251 Sum_probs=100.5
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
..++.+|||+|||+|.++..++.... .+++|+|+++.+++.|+++++..++. ++++++++|+.++++++++||+|+++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~-~~i~~~~~D~~~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL-DKIKFIQGDATQLSQYVDSVDFAISN 293 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCG-GGCEEEECCGGGGGGTCSCEEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCC-CceEEEECChhhCCcccCCcCEEEEC
Confidence 34778999999999999999987432 48999999999999999999998874 58999999999998888899999996
Q ss_pred cccc-------CcccH-HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcC
Q 022248 202 LVLC-------SVKDV-DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAG 273 (300)
Q Consensus 202 ~~l~-------~~~~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 273 (300)
-... .+.+. ..+++++.++| +|.++++... .+.+.+.+.+.|
T Consensus 294 pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~----------------------------~~~~~~~~~~~G 343 (373)
T 3tm4_A 294 LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE----------------------------KKAIEEAIAENG 343 (373)
T ss_dssp CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC----------------------------HHHHHHHHHHTT
T ss_pred CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC----------------------------HHHHHHHHHHcC
Confidence 4322 12222 56788899988 5555555421 125667888999
Q ss_pred CcEEEEeeec
Q 022248 274 FSSVELGNAF 283 (300)
Q Consensus 274 f~~v~~~~~~ 283 (300)
|+.......+
T Consensus 344 ~~~~~~~~~~ 353 (373)
T 3tm4_A 344 FEIIHHRVIG 353 (373)
T ss_dssp EEEEEEEEEE
T ss_pred CEEEEEEEEE
Confidence 9977665443
No 217
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.48 E-value=6.8e-13 Score=118.79 Aligned_cols=111 Identities=17% Similarity=0.090 Sum_probs=90.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCC-CCCCEEEEecccCcCCC----CCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGL-PLTNFKFLQAVGEAIPV----SDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~-~~~~~~~~~~d~~~~~~----~~~~~D~v 198 (300)
.++.+|||+|||+|.++..++.....+++++|+++.+++.|+++++.+++ . ++++|+.+|+.+... ..+.||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~-~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDL-SKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCG-GGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-cceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 36789999999999999999976556999999999999999999998886 4 379999999876521 24689999
Q ss_pred EEcc---------cccCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 199 VGTL---------VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 199 ~~~~---------~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
++.- ......+...++.++.++|+|||++++++....
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 9853 222335667889999999999999999885443
No 218
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.47 E-value=3.1e-13 Score=116.10 Aligned_cols=105 Identities=14% Similarity=0.215 Sum_probs=84.1
Q ss_pred CCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEEcc
Q 022248 126 AKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVGTL 202 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~~ 202 (300)
..+|||||||+|.++..+++ .++.++++||+++.+++.|++++.... .++++++.+|+... .+++++||+|++..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR--APRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC--CCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 34999999999999999998 577899999999999999999864322 25899999998764 34568999999864
Q ss_pred cccCc-cc---HHHHHHHHHHcccCCcEEEEEec
Q 022248 203 VLCSV-KD---VDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 203 ~l~~~-~~---~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
..... +. ...++++++++|+|||+|++...
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 33321 11 25789999999999999998764
No 219
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.47 E-value=2.7e-13 Score=112.88 Aligned_cols=104 Identities=21% Similarity=0.245 Sum_probs=87.0
Q ss_pred CCCeEEEECCCCChhHHHhHhC-C-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-C-----CCCcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-T-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-V-----SDASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~~ 195 (300)
++.+|||||||+|..+..+++. + +.+++++|+++.+++.|+++++..++. ++++++.+|+.+. + + ++++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE-HKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 6789999999999999999874 2 679999999999999999999988874 5799999998653 2 2 25789
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|++... ..+...+++++.++|+|||++++.+.
T Consensus 149 D~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99998642 34667889999999999999988653
No 220
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.47 E-value=3.9e-13 Score=113.31 Aligned_cols=99 Identities=13% Similarity=0.020 Sum_probs=81.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHH--cCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVA--AGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
..+.+|||||||+|.++..+++.. .+++++|+++.+++.|++.+.. .++..++++++.+|+.... ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 356899999999999999998774 8999999999999999876532 1122358999999987764 789999986
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
. .++..+++++.++|+|||++++..
T Consensus 147 ~-----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 Q-----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S-----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 3 345568999999999999999864
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.47 E-value=6.2e-13 Score=115.86 Aligned_cols=108 Identities=24% Similarity=0.236 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHc--CCCCCCEEEEecccCcC--CCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAA--GLPLTNFKFLQAVGEAI--PVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~--~~~~~~~D~v 198 (300)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++... ++..++++++.+|+... ..++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45689999999999999999875 3579999999999999999987652 33235899999998764 2346789999
Q ss_pred EEccccc-Cc-cc--HHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLC-SV-KD--VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~-~~-~~--~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++..... +. .+ ...+++++.++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9865421 11 11 3678999999999999999964
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.47 E-value=1.2e-13 Score=111.02 Aligned_cols=96 Identities=19% Similarity=0.222 Sum_probs=74.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC-----------C
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS-----------D 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 192 (300)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.. . .+++.++++|+.+.+.. .
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E--IAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C--CTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c--CCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 57889999999999999999876 7799999999741 1 24899999999876421 1
Q ss_pred CcccEEEEcccccCc----cc-------HHHHHHHHHHcccCCcEEEEEecc
Q 022248 193 ASVDAVVGTLVLCSV----KD-------VDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~----~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
++||+|++....... .+ ...+++.+.++|||||.|++..+.
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 489999997543321 11 246789999999999999987753
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.47 E-value=1.1e-12 Score=111.96 Aligned_cols=109 Identities=10% Similarity=0.049 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcC--CCCCCEEEEecccCcC-CCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAG--LPLTNFKFLQAVGEAI-PVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~-~~~~~~~D~v~ 199 (300)
+++.+|||||||+|.++..+++. +..+++++|+++.+++.|++.+...+ +..++++++.+|+... +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46689999999999999999875 35799999999999999999875431 2235899999998663 33367899999
Q ss_pred EcccccCcc--cH--HHHHHHHHHcccCCcEEEEEec
Q 022248 200 GTLVLCSVK--DV--DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 200 ~~~~l~~~~--~~--~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.......+ .. ..+++++.++|+|||++++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 854433222 22 5889999999999999998753
No 224
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.47 E-value=2.5e-13 Score=117.45 Aligned_cols=108 Identities=17% Similarity=0.124 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHc--CCCCCCEEEEecccCc-CCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAA--GLPLTNFKFLQAVGEA-IPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~-~~~~~~~~D~v~ 199 (300)
..+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++... ++..++++++.+|+.. ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35689999999999999999875 4579999999999999999987543 3323589999999866 333567899999
Q ss_pred EcccccCcccH----HHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVKDV----DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~~~----~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.......+.. ..+++++.++|+|||++++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 86532211111 578999999999999999865
No 225
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.46 E-value=9.7e-13 Score=119.58 Aligned_cols=110 Identities=16% Similarity=0.222 Sum_probs=90.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~ 199 (300)
.++.+|||+|||+|..+..+++. .+ .+++++|+++.+++.++++++..++. ++.++.+|+..++ ++++.||+|+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~--~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK--IVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC--SEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC--cEEEEEcChhhcchhhccCCCCEEE
Confidence 46789999999999999999873 23 69999999999999999999988874 7999999998876 5557899999
Q ss_pred E------cccccCcccH----------------HHHHHHHHHcccCCcEEEEEecccC
Q 022248 200 G------TLVLCSVKDV----------------DMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 200 ~------~~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
+ ..+++..++. ..++.++.++|||||++++++....
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 6 2334433332 5689999999999999999886543
No 226
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.45 E-value=2.1e-12 Score=104.98 Aligned_cols=126 Identities=15% Similarity=0.019 Sum_probs=94.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++....+++|+|+++.+++.++++++..++ +++++.+|+..++ +.||+|+++..
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~---~~~D~v~~~~p 121 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG---KFKVFIGDVSEFN---SRVDIVIMNPP 121 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT---SEEEEESCGGGCC---CCCSEEEECCC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC---CEEEEECchHHcC---CCCCEEEEcCC
Confidence 46789999999999999999876445899999999999999999877765 7999999998875 48999999877
Q ss_pred ccCcc--cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEee
Q 022248 204 LCSVK--DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 204 l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 281 (300)
.+... ....+++++.+++ || +++..... ... .+.+.+.+.+.||+...+..
T Consensus 122 ~~~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~---~~~---------------------~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 122 FGSQRKHADRPFLLKAFEIS--DV-VYSIHLAK---PEV---------------------RRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp CSSSSTTTTHHHHHHHHHHC--SE-EEEEEECC---HHH---------------------HHHHHHHHHHTTEEEEEEEE
T ss_pred CccccCCchHHHHHHHHHhc--Cc-EEEEEeCC---cCC---------------------HHHHHHHHHHCCCeEEEEEE
Confidence 66553 3356788888888 44 44433111 000 12455678889998766654
Q ss_pred e
Q 022248 282 A 282 (300)
Q Consensus 282 ~ 282 (300)
.
T Consensus 175 ~ 175 (207)
T 1wy7_A 175 T 175 (207)
T ss_dssp E
T ss_pred E
Confidence 3
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.45 E-value=1e-12 Score=106.29 Aligned_cols=95 Identities=14% Similarity=0.017 Sum_probs=74.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++....+++|+|+++.+++.|++++. +++++++|+.+++ ++||+|+++..
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~~---~~~D~v~~~~p 119 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEIS---GKYDTWIMNPP 119 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGCC---CCEEEEEECCC
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHCC---CCeeEEEECCC
Confidence 4678999999999999999987644479999999999999998853 6899999998875 68999999988
Q ss_pred ccCcccH--HHHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSVKDV--DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++++.+. ..+++++.+++ |.++++.
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp C-------CHHHHHHHHHHE---EEEEEEE
T ss_pred chhccCchhHHHHHHHHHhc---CcEEEEE
Confidence 8887542 46788899888 4444444
No 228
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.45 E-value=5.4e-13 Score=118.83 Aligned_cols=108 Identities=19% Similarity=0.141 Sum_probs=88.4
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----CCCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV----SDASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~v~~ 200 (300)
++.+|||+|||+|.++..++.. ..+++++|+++.+++.|+++++.+++. +++|+.+|+.+... .+++||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~--~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG--NVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT--TEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 6779999999999999999876 678999999999999999999998874 59999999876521 2578999998
Q ss_pred cccc---------cCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 201 TLVL---------CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 201 ~~~l---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
.--. ....+...++.++.++|+|||.+++++....
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 4321 1113456789999999999999999886543
No 229
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.45 E-value=2.7e-13 Score=115.33 Aligned_cols=109 Identities=11% Similarity=0.065 Sum_probs=88.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----CCCcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV----SDASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~ 197 (300)
.++.+|||+|||+|..+..+++. ...+++++|+++.+++.++++++..++. ++.++.+|+..++. ..+.||+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~--~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL--NTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC--cEEEEeCChHhcchhhhhccccCCE
Confidence 46789999999999999999873 3379999999999999999999988874 89999999987654 2578999
Q ss_pred EEEcc------ccc------------CcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 198 VVGTL------VLC------------SVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 198 v~~~~------~l~------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|++.- ++. .......+++++.++|||||++++++...
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99862 111 11345788999999999999999987544
No 230
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.44 E-value=7.4e-13 Score=106.66 Aligned_cols=98 Identities=21% Similarity=0.244 Sum_probs=75.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCC----------ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEE-ecccCcCC---
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTD----------VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFL-QAVGEAIP--- 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~----------~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~d~~~~~--- 189 (300)
.++.+|||+|||+|.++..+++..+ .+++|+|+++.+ .+ .++.++ .+|+...+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~--~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL--EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC--TTCEEECSCCTTSHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC--CCCeEEEeccCCCHHHHH
Confidence 4678999999999999999987532 689999999831 11 468888 88876543
Q ss_pred -----CCCCcccEEEEcccccC----cccH-------HHHHHHHHHcccCCcEEEEEeccc
Q 022248 190 -----VSDASVDAVVGTLVLCS----VKDV-------DMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 190 -----~~~~~~D~v~~~~~l~~----~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+++++||+|++...++. ..+. ..+++++.++|||||.+++..+..
T Consensus 88 ~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 88 RILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 34568999999765443 2233 478999999999999999987544
No 231
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=6.8e-13 Score=118.77 Aligned_cols=114 Identities=18% Similarity=0.114 Sum_probs=91.0
Q ss_pred hhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----CCCccc
Q 022248 121 NLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV----SDASVD 196 (300)
Q Consensus 121 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D 196 (300)
.+..++.+|||+|||+|.++..++.....+++++|+++.+++.|+++++..++. ++++|+.+|+.+... .++.||
T Consensus 213 ~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~-~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 213 KWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVE-DRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp GGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred HHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEECCHHHHHHHHHhhCCCCC
Confidence 333467899999999999999999764559999999999999999999988874 389999999876521 257899
Q ss_pred EEEEcccc---------cCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 197 AVVGTLVL---------CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 197 ~v~~~~~l---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
+|++.--. ....+...++.++.++|+|||.+++++....
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 99985321 1124456789999999999999999886543
No 232
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.43 E-value=2.1e-12 Score=106.52 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=91.4
Q ss_pred HHHHHhhcCCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 116 SQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 116 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
..++..+ .+..+|||||||.|.++..++.. +..+|+++|+++.+++.+++++...++ ...+...|...-+ +.+.
T Consensus 124 ~~i~~~i-~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~---~~~~~v~D~~~~~-p~~~ 198 (281)
T 3lcv_B 124 RELFRHL-PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV---PHRTNVADLLEDR-LDEP 198 (281)
T ss_dssp HHHGGGS-CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC---CEEEEECCTTTSC-CCSC
T ss_pred HHHHhcc-CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEeeecccC-CCCC
Confidence 3344444 45789999999999999998774 778999999999999999999998886 4788888876655 4588
Q ss_pred ccEEEEcccccCcccHHH-HHHHHHHcccCCcEEEEEec
Q 022248 195 VDAVVGTLVLCSVKDVDM-TLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~-~l~~~~~~LkpgG~l~~~~~ 232 (300)
||+++++-+++++++..+ ..-++.+.|+|+|.++-...
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred cchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 999999999999976632 33399999999998877653
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=3.4e-12 Score=113.60 Aligned_cols=114 Identities=15% Similarity=0.091 Sum_probs=86.7
Q ss_pred HHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCcccE
Q 022248 119 FDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVDA 197 (300)
Q Consensus 119 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~ 197 (300)
+..+..++.+|||+|||+|.++..++.. +..|+++|+|+.+++.|+++++.+++. ..+.++|+.+. +...+.||+
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~---~~~~~~D~~~~l~~~~~~fD~ 283 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR---VDIRHGEALPTLRGLEGPFHH 283 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC---CEEEESCHHHHHHTCCCCEEE
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC---CcEEEccHHHHHHHhcCCCCE
Confidence 3344445889999999999999999875 556999999999999999999988874 35668888664 221344999
Q ss_pred EEEcccccC---------cccHHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 198 VVGTLVLCS---------VKDVDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 198 v~~~~~l~~---------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
|++.--... ..+...++..+.++|+|||+|++.......
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~ 331 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL 331 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC
Confidence 998532211 134467899999999999999987755443
No 234
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=8.7e-14 Score=118.10 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=75.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHH-HcCCCCCCEEEE--ecccCcCCCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAV-AAGLPLTNFKFL--QAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++... ..... .++.|+ ++|+..++ +++||+|+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 46789999999999999999876 6999999998 5433221100 00000 168899 99998876 679999999
Q ss_pred cccccCcccH----H---HHHHHHHHcccCCc--EEEEEecc
Q 022248 201 TLVLCSVKDV----D---MTLQEVRRVLKPGG--IYLFVEHV 233 (300)
Q Consensus 201 ~~~l~~~~~~----~---~~l~~~~~~LkpgG--~l~~~~~~ 233 (300)
..+ ++..+. . .++.++.++||||| .|++..+.
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 877 443221 1 37899999999999 99987765
No 235
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.42 E-value=8.8e-12 Score=112.72 Aligned_cols=149 Identities=20% Similarity=0.223 Sum_probs=104.8
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc----C
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA----I 188 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~----~ 188 (300)
+...+++.+. .++.+|||+|||+|.++..+++. ..+++|+|+++.+++.|+++++..++. +++|+.+|+.+ +
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~--~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ--NVTFYHENLEEDVTKQ 350 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCTTSCCSSS
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEECCHHHHhhhh
Confidence 3344444443 45689999999999999999875 679999999999999999999988874 89999999977 3
Q ss_pred CCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHH
Q 022248 189 PVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNN 268 (300)
Q Consensus 189 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++.+++||+|++.---... ..+++.+.+ ++|++.++++.... .+ . .+. ..
T Consensus 351 ~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc~p~----tl---a------------------rd~-~~ 400 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSCNPA----TL---A------------------RDS-EA 400 (433)
T ss_dssp GGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEESCHH----HH---H------------------HHH-HH
T ss_pred hhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEECChH----HH---H------------------hhH-HH
Confidence 4566789999985322211 234454443 78999888866211 01 0 022 45
Q ss_pred HHhcCCcEEEEeeeccCCcccccceeeEEe
Q 022248 269 ISEAGFSSVELGNAFLSNASLISPHVYGIA 298 (300)
Q Consensus 269 l~~aGf~~v~~~~~~~~~~~~~~~~~~~~~ 298 (300)
|.+.||....+...++ +..++|+..++
T Consensus 401 l~~~Gy~~~~~~~~d~---Fp~t~HvE~v~ 427 (433)
T 1uwv_A 401 LLKAGYTIARLAMLDM---FPHTGHLESMV 427 (433)
T ss_dssp HHHTTCEEEEEEEECC---STTSSCCEEEE
T ss_pred HHHCCcEEEEEEEecc---CCCCCeEEEEE
Confidence 6678999887765544 45677765443
No 236
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.41 E-value=1.3e-13 Score=116.32 Aligned_cols=103 Identities=13% Similarity=0.104 Sum_probs=75.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHH-HcCCCCCCEEEE--ecccCcCCCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAV-AAGLPLTNFKFL--QAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~D~v~~ 200 (300)
.++.+|||||||+|.++..+++. .+|+|||+++ ++..+++... ..... .++.++ ++|+..++ +++||+|+|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC--CCCCcEEEE
Confidence 56789999999999999999876 6999999998 5322221100 00000 168889 99998876 679999999
Q ss_pred cccccCcccH----H---HHHHHHHHcccCCc--EEEEEecc
Q 022248 201 TLVLCSVKDV----D---MTLQEVRRVLKPGG--IYLFVEHV 233 (300)
Q Consensus 201 ~~~l~~~~~~----~---~~l~~~~~~LkpgG--~l~~~~~~ 233 (300)
..+ ++..++ . .++.++.++||||| .|++..+.
T Consensus 147 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 877 443222 1 37899999999999 99997765
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.39 E-value=3.1e-12 Score=104.52 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=86.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||.|.++..+. +...|+++|+++.+++.+++.+...+. +..+..+|....+.+ ++||+|++.-+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~---~~~~~v~D~~~~~~~-~~~DvvLllk~ 177 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW---DFTFALQDVLCAPPA-EAGDLALIFKL 177 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC---EEEEEECCTTTSCCC-CBCSEEEEESC
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC---CceEEEeecccCCCC-CCcchHHHHHH
Confidence 467899999999999999887 778999999999999999999888773 789999999887765 58999999999
Q ss_pred ccCcccHH-HHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSVKDVD-MTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~~~~~-~~l~~~~~~LkpgG~l~~~~ 231 (300)
++++++.. ....++.+.|+++|+++-..
T Consensus 178 lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 178 LPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 99986553 33448888999998777655
No 238
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.38 E-value=1.7e-12 Score=110.98 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=79.5
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcc
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASV 195 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 195 (300)
.+++.+. .++.+|||||||+|.++..+++. +.+++|+|+++.+++.+++++...+.. ++++++.+|+.+++++ .|
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~D~~~~~~~--~f 94 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVA-SKLQVLVGDVLKTDLP--FF 94 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEEESCTTTSCCC--CC
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCC-CceEEEEcceecccch--hh
Confidence 3444443 46789999999999999999875 459999999999999999988655542 4899999999888765 79
Q ss_pred cEEEEcccccCcccHH-HHH--------------HHH--HHcccCCcEEE
Q 022248 196 DAVVGTLVLCSVKDVD-MTL--------------QEV--RRVLKPGGIYL 228 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~-~~l--------------~~~--~~~LkpgG~l~ 228 (300)
|+|+++...+...+.. .++ +|+ +++|+|||.++
T Consensus 95 D~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 95 DTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9999965443322221 122 233 36899999653
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.37 E-value=7e-12 Score=109.65 Aligned_cols=102 Identities=11% Similarity=0.097 Sum_probs=86.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++.. ++ ...+++++|+++.+++.|+++++..++. +++.++.+|+.+.. +.||+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~-~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLE-HKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECChHHhc---CCCcEEEECCc
Confidence 4778999999999999999 86 5779999999999999999999998874 48999999998875 78999998531
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecccC
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
. ....++..+.++|+|||.+++.+....
T Consensus 268 -~---~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 268 -K---FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -T---TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -H---hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 1 123678999999999999999886543
No 240
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.37 E-value=2.2e-12 Score=116.46 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|..+..+++. ....|+++|+++.+++.++++++..++. ++.++.+|+..++ ..++.||+|++
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~--nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS--NAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS--SEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--ceEEEeCCHHHhhhhccccCCEEEE
Confidence 46789999999999999999873 3469999999999999999999999874 7999999987764 23578999997
Q ss_pred cc------cccCccc----------------HHHHHHHHHHcccCCcEEEEEecccC
Q 022248 201 TL------VLCSVKD----------------VDMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 201 ~~------~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
.- ++..-++ ...++.++.++|||||+|++++....
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 32 2221111 12679999999999999999875443
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.36 E-value=3.8e-12 Score=116.02 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=88.0
Q ss_pred CCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC-CCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV-SDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~ 201 (300)
++.+|||+|||+|..+..+++. ....|+++|+++.+++.++++++..++. ++.++.+|+..++. .++.||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~--nv~~~~~D~~~~~~~~~~~fD~Il~D 194 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS--NVALTHFDGRVFGAAVPEMFDAILLD 194 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC--SEEEECCCSTTHHHHSTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--cEEEEeCCHHHhhhhccccCCEEEEC
Confidence 6789999999999999999874 3479999999999999999999988874 79999999988753 45789999972
Q ss_pred ------ccccCccc----------------HHHHHHHHHHcccCCcEEEEEeccc
Q 022248 202 ------LVLCSVKD----------------VDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 202 ------~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.++...++ ...++.++.++|||||+|++++...
T Consensus 195 ~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 195 APCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 12222121 2467999999999999999987644
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=2.2e-12 Score=116.64 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=86.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-CCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-VSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|..+..+++. ....|+++|+++.+++.++++++..++ . +.++.+|+..++ +.++.||+|++
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~--~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA--P-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC--C-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--e-EEEEECCHHHhhhhccccCCEEEE
Confidence 46789999999999999999874 336999999999999999999999887 3 889999987765 34578999996
Q ss_pred c------ccccCccc----------------HHHHHHHHHHcccCCcEEEEEeccc
Q 022248 201 T------LVLCSVKD----------------VDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 201 ~------~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
. .++..-++ ...++.++.++|||||+|++++...
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 2 12222122 2668999999999999999987544
No 243
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.33 E-value=7.8e-12 Score=109.78 Aligned_cols=120 Identities=23% Similarity=0.229 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhc--CCCCeEEEECCCCChhHHHhHhCC------CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEe
Q 022248 111 VAGYKSQLFDNLR--GKAKKVLEIGIGTGPNLKYYAADT------DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQ 182 (300)
Q Consensus 111 ~~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~------~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 182 (300)
+...+..++..+. .++.+|||+|||+|.++..+++.. ..+++|+|+++.+++.|+.++...++ ++.++.
T Consensus 114 i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~---~~~i~~ 190 (344)
T 2f8l_A 114 IGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ---KMTLLH 190 (344)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC---CCEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC---CceEEE
Confidence 3444444554442 356799999999999998887632 16899999999999999999887775 578899
Q ss_pred cccCcCCCCCCcccEEEEcccccCcccH------------------HHHHHHHHHcccCCcEEEEEeccc
Q 022248 183 AVGEAIPVSDASVDAVVGTLVLCSVKDV------------------DMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 183 ~d~~~~~~~~~~~D~v~~~~~l~~~~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+|..... ..+.||+|+++-.+.+++.. ..+++++.+.|+|||+++++.+..
T Consensus 191 ~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 191 QDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp SCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 9976633 45789999998665444321 257999999999999999988543
No 244
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.31 E-value=3.1e-12 Score=110.11 Aligned_cols=103 Identities=15% Similarity=0.082 Sum_probs=74.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcC----CHHHHHHHHHHHHHcCCCCCCEEEEec-ccCcCCCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDP----NRKMEKYAQTAAVAAGLPLTNFKFLQA-VGEAIPVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~----s~~~~~~a~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v 198 (300)
.++.+|||||||+|.++..+++. .+|+|+|+ ++.+++.+. ......+++.|+++ |+..++ .++||+|
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~D~~~l~--~~~fD~V 152 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP----MSTYGWNLVRLQSGVDVFFIP--PERCDTL 152 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC----CCSTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH----hhhcCCCCeEEEeccccccCC--cCCCCEE
Confidence 56789999999999999999876 58999999 554332111 01111147899999 887765 4689999
Q ss_pred EEccccc---CcccHH---HHHHHHHHcccCCcEEEEEeccc
Q 022248 199 VGTLVLC---SVKDVD---MTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 199 ~~~~~l~---~~~~~~---~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+|..+++ +..+.. .++.++.++|||||.|++..+..
T Consensus 153 ~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 153 LCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9977653 222322 47899999999999999866543
No 245
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.31 E-value=1.1e-11 Score=112.03 Aligned_cols=109 Identities=16% Similarity=0.199 Sum_probs=88.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v~~ 200 (300)
.++.+|||+|||+|..+..+++. .+.+++++|+++.+++.++++++..++ ++.++.+|+..++ ++++.||+|++
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~---~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM---KATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC---CCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC---CeEEEeCchhhchhhcccCCCCEEEE
Confidence 46789999999999999999874 337999999999999999999998876 4788999998775 55678999996
Q ss_pred c------ccccCcccH----------------HHHHHHHHHcccCCcEEEEEecccC
Q 022248 201 T------LVLCSVKDV----------------DMTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 201 ~------~~l~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
. .++++.++. ..+++++.++|||||++++++....
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 2 233333332 4779999999999999999885443
No 246
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.30 E-value=1.2e-11 Score=109.60 Aligned_cols=145 Identities=12% Similarity=0.058 Sum_probs=100.5
Q ss_pred HHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CCC-
Q 022248 116 SQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VSD- 192 (300)
Q Consensus 116 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~~- 192 (300)
..+++.+...+.+|||+|||+|.++..+++ ...+|+|+|+++.+++.|+++++.+++. +++|+.+|++++. +..
T Consensus 204 ~~~~~~~~~~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng~~--~v~~~~~d~~~~~~~~~~~ 280 (369)
T 3bt7_A 204 EWALDVTKGSKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANHID--NVQIIRMAAEEFTQAMNGV 280 (369)
T ss_dssp HHHHHHTTTCCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTTCC--SEEEECCCSHHHHHHHSSC
T ss_pred HHHHHHhhcCCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEECCHHHHHHHHhhc
Confidence 334444433467899999999999999986 4569999999999999999999988874 8999999987641 121
Q ss_pred -------------CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCc
Q 022248 193 -------------ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGC 259 (300)
Q Consensus 193 -------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (300)
+.||+|++.--- ..+..++.+.|+++|.++++...+.. . .
T Consensus 281 ~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~p~t---~---a--------------- 333 (369)
T 3bt7_A 281 REFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCNPET---L---C--------------- 333 (369)
T ss_dssp CCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESCHHH---H---H---------------
T ss_pred cccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECCHHH---H---H---------------
Confidence 379999974211 12345677778899999888753321 1 1
Q ss_pred ccchHHHHHHHhcCCcEEEEeeeccCCcccccceeeEEe
Q 022248 260 HLTRQTGNNISEAGFSSVELGNAFLSNASLISPHVYGIA 298 (300)
Q Consensus 260 ~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~~~~~~ 298 (300)
.++..+. + ||++..+...++ |+.|+|+..++
T Consensus 334 ---rd~~~l~-~-~y~~~~~~~~D~---FP~T~HvE~v~ 364 (369)
T 3bt7_A 334 ---KNLETLS-Q-THKVERLALFDQ---FPYTHHMQCGV 364 (369)
T ss_dssp ---HHHHHHH-H-HEEEEEEEEECC---STTSSCCEEEE
T ss_pred ---HHHHHHh-h-CcEEEEEEeecc---CCCCCcEEEEE
Confidence 1333332 2 688777766655 56777766543
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.29 E-value=1.8e-10 Score=103.52 Aligned_cols=99 Identities=20% Similarity=0.209 Sum_probs=78.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.|+++++..++ . ++|+.+|+.++.. ..||+|++.-.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl--~-v~~~~~d~~~~~~--~~fD~Vv~dPP 362 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNV--D-AEFEVASDREVSV--KGFDTVIVDPP 362 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC--C-EEEEECCTTTCCC--TTCSEEEECCC
T ss_pred CCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--c-EEEEECChHHcCc--cCCCEEEEcCC
Confidence 46789999999999999999875 56999999999999999999988876 3 9999999988743 28999998543
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
-... ...+++.+. .|+|+|.++++.
T Consensus 363 r~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 363 RAGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp TTCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred ccch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 2111 123455554 489999999976
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.28 E-value=3.3e-11 Score=103.64 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.++.+|||||||+|.++..+++. +.+++|+|+++.+++.+++++...++ ++++++.+|+..++++ .||+|+++..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~--~~v~~~~~D~~~~~~~--~~D~Vv~n~p 115 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY--NNLEVYEGDAIKTVFP--KFDVCTANIP 115 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEC----CCSSCCC--CCSEEEEECC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEECchhhCCcc--cCCEEEEcCC
Confidence 46789999999999999999875 66999999999999999999877665 4899999999888754 8999998654
Q ss_pred ccCcccH-HHHH---------------HHHHHcccCCc
Q 022248 204 LCSVKDV-DMTL---------------QEVRRVLKPGG 225 (300)
Q Consensus 204 l~~~~~~-~~~l---------------~~~~~~LkpgG 225 (300)
.+..... ..++ +.+.|+++++|
T Consensus 116 y~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 116 YKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 3322211 2233 44678888877
No 249
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.27 E-value=1.8e-11 Score=104.09 Aligned_cols=114 Identities=10% Similarity=0.037 Sum_probs=82.4
Q ss_pred CCCCeEEEECCCC------ChhHHHhHh-CC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEE-EecccCcCCCCCCc
Q 022248 124 GKAKKVLEIGIGT------GPNLKYYAA-DT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKF-LQAVGEAIPVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~------G~~~~~l~~-~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 194 (300)
.++.+|||+|||+ |. ..+++ .+ +.+|+|+|+++. + ++++| +++|+.+++++ ++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v--~~v~~~i~gD~~~~~~~-~~ 123 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V--SDADSTLIGDCATVHTA-NK 123 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B--CSSSEEEESCGGGCCCS-SC
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C--CCCEEEEECccccCCcc-Cc
Confidence 5678999999955 55 33333 22 579999999997 1 26788 99999888764 78
Q ss_pred ccEEEEcccccC-----------cccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccch
Q 022248 195 VDAVVGTLVLCS-----------VKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTR 263 (300)
Q Consensus 195 ~D~v~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (300)
||+|+++...+. ......+++++.++|||||.|++..+.... .+
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~-------------------------~~ 178 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW-------------------------NA 178 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC-------------------------CH
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC-------------------------HH
Confidence 999999654221 112357899999999999999997643211 13
Q ss_pred HHHHHHHhcCCcEEEEe
Q 022248 264 QTGNNISEAGFSSVELG 280 (300)
Q Consensus 264 ~~~~~l~~aGf~~v~~~ 280 (300)
++.+++++.||..+++.
T Consensus 179 ~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 179 DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHcCCcEEEEE
Confidence 66777888888876665
No 250
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.24 E-value=4.6e-11 Score=103.81 Aligned_cols=109 Identities=19% Similarity=0.101 Sum_probs=80.6
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcC---CCC---CCEEEEecccCcCCC----CCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAG---LPL---TNFKFLQAVGEAIPV----SDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~---~~~---~~~~~~~~d~~~~~~----~~~ 193 (300)
+.+.+||+||||+|.++..+++....++++||+++.+++.|++.+...+ +.. ++++++.+|+...-- .++
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 4678999999999999999988666789999999999999999864321 221 279999999876421 357
Q ss_pred cccEEEEcccc-c-C-cc---cHHHHHHHH----HHcccCCcEEEEEec
Q 022248 194 SVDAVVGTLVL-C-S-VK---DVDMTLQEV----RRVLKPGGIYLFVEH 232 (300)
Q Consensus 194 ~~D~v~~~~~l-~-~-~~---~~~~~l~~~----~~~LkpgG~l~~~~~ 232 (300)
+||+|++...- . . .+ -...+++.+ .++|+|||++++...
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 89999986432 1 0 11 113455665 999999999998653
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.21 E-value=6.6e-10 Score=97.66 Aligned_cols=159 Identities=11% Similarity=-0.003 Sum_probs=101.0
Q ss_pred CCeEEEECCCCChhHHHhHh----------------CCCceEEEEcCCHHHHHHHHHHHHHcC-----------C--CCC
Q 022248 126 AKKVLEIGIGTGPNLKYYAA----------------DTDVQVLGVDPNRKMEKYAQTAAVAAG-----------L--PLT 176 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~----------------~~~~~~~giD~s~~~~~~a~~~~~~~~-----------~--~~~ 176 (300)
..+|+|+|||+|..+..++. .+..++...|+........-+.+.... . ...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999988877632 146788888887766555444432210 0 000
Q ss_pred CEEEEecccCcCCCCCCcccEEEEcccccCcc--------------------------------------cHHHHHHHHH
Q 022248 177 NFKFLQAVGEAIPVSDASVDAVVGTLVLCSVK--------------------------------------DVDMTLQEVR 218 (300)
Q Consensus 177 ~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~ 218 (300)
-+.-+.+.+..-.+++++||+|+++.+|||+. |...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122333334457899999999999999985 3445788999
Q ss_pred HcccCCcEEEEEecccCCCc-------------hHHHHHHHhhhhh---hh-----hhcCCcccchHHHHHHH-hcCCcE
Q 022248 219 RVLKPGGIYLFVEHVAAKDG-------------TFLKFWQNVVDPL---QQ-----IVSDGCHLTRQTGNNIS-EAGFSS 276 (300)
Q Consensus 219 ~~LkpgG~l~~~~~~~~~~~-------------~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~l~-~aGf~~ 276 (300)
+.|+|||++++......... .+...|..+.... .. .......+.+|++.+++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999887654321 1111222222111 01 01123467899999998 599998
Q ss_pred EEEeeecc
Q 022248 277 VELGNAFL 284 (300)
Q Consensus 277 v~~~~~~~ 284 (300)
..++....
T Consensus 293 ~~le~~~~ 300 (374)
T 3b5i_A 293 DKLVVYKG 300 (374)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEee
Confidence 88876544
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.18 E-value=8.1e-12 Score=104.29 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=62.2
Q ss_pred HHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-
Q 022248 115 KSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD- 192 (300)
Q Consensus 115 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~- 192 (300)
...+++.+. .++.+|||||||+|.++..+++.. .+++|+|+++.+++.+++++... ++++++.+|+.++++++
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCGGGCCCCSS
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC----CCeEEEEChHHhCCcccC
Confidence 334444443 467899999999999999998754 69999999999999999886532 48999999999988764
Q ss_pred CcccEEEE
Q 022248 193 ASVDAVVG 200 (300)
Q Consensus 193 ~~~D~v~~ 200 (300)
..| .|++
T Consensus 94 ~~~-~vv~ 100 (244)
T 1qam_A 94 QSY-KIFG 100 (244)
T ss_dssp CCC-EEEE
T ss_pred CCe-EEEE
Confidence 345 3444
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=1.4e-10 Score=99.04 Aligned_cols=83 Identities=20% Similarity=0.303 Sum_probs=69.1
Q ss_pred HHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCc
Q 022248 116 SQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDAS 194 (300)
Q Consensus 116 ~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 194 (300)
..+++.+. .++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++.+|+.++++++..
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~----~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY----NNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC----SSEEEEESCTTTSCGGGSC
T ss_pred HHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC----CCeEEEECchhhCCcccCC
Confidence 33444443 46789999999999999999975 669999999999999999988732 4899999999998888778
Q ss_pred ccEEEEccc
Q 022248 195 VDAVVGTLV 203 (300)
Q Consensus 195 ~D~v~~~~~ 203 (300)
||+|+++..
T Consensus 115 fD~Iv~NlP 123 (295)
T 3gru_A 115 FNKVVANLP 123 (295)
T ss_dssp CSEEEEECC
T ss_pred ccEEEEeCc
Confidence 999997643
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=5.3e-10 Score=99.50 Aligned_cols=107 Identities=18% Similarity=0.107 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C--------------------------------------CceEEEEcCCHHHHHHH
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T--------------------------------------DVQVLGVDPNRKMEKYA 164 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------------------------------~~~~~giD~s~~~~~~a 164 (300)
.++..|||++||+|.+++.++.. . ..+++|+|+++.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 46789999999999998877641 1 14699999999999999
Q ss_pred HHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc--ccccCc--ccHHHHHHHHHHcccC--CcEEEEEec
Q 022248 165 QTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT--LVLCSV--KDVDMTLQEVRRVLKP--GGIYLFVEH 232 (300)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~--~~l~~~--~~~~~~l~~~~~~Lkp--gG~l~~~~~ 232 (300)
++++...++. .+++++++|+.+++.+ ++||+|+++ +....- .+...+++++.+.||+ ||.++++..
T Consensus 280 r~Na~~~gl~-~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 280 KQNAVEAGLG-DLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHTTCT-TCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHcCCC-CceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999999885 4699999999998765 589999997 322211 2334566767777766 999988774
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.11 E-value=3.4e-13 Score=112.84 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=75.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-CcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-ASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++. . .++++++.+|+.++++++ ++| .|+++.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~--~--~~~v~~~~~D~~~~~~~~~~~f-~vv~n~ 101 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK--L--NTRVTLIHQDILQFQFPNKQRY-KIVGNI 101 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT--T--CSEEEECCSCCTTTTCCCSSEE-EEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc--c--CCceEEEECChhhcCcccCCCc-EEEEeC
Confidence 46779999999999999999875 4799999999999999887654 1 258999999999988764 678 565542
Q ss_pred cccCcc------------cHHHHH----HHHHHcccCCcEEEEEe
Q 022248 203 VLCSVK------------DVDMTL----QEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 203 ~l~~~~------------~~~~~l----~~~~~~LkpgG~l~~~~ 231 (300)
.++.. +....+ +.+.|+|+|||.+.+..
T Consensus 102 -Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 102 -PYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp -CSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred -CccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 12211 112223 66889999999877643
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.11 E-value=1.2e-09 Score=96.81 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=84.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C--------------------------------------CceEEEEcCCHHHHHHH
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T--------------------------------------DVQVLGVDPNRKMEKYA 164 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------------------------------~~~~~giD~s~~~~~~a 164 (300)
.++..|||.+||+|.+++.++.. . ..+++|+|+++.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 46789999999999998887641 1 14699999999999999
Q ss_pred HHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc--cccc--CcccHHHHHHHHHHcccC--CcEEEEEec
Q 022248 165 QTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT--LVLC--SVKDVDMTLQEVRRVLKP--GGIYLFVEH 232 (300)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~--~~l~--~~~~~~~~l~~~~~~Lkp--gG~l~~~~~ 232 (300)
+++++..++. ..++|+++|+.+++.+ +.||+|+++ +... .-.+...+++++.+.||+ ||.++++..
T Consensus 273 r~Na~~~gl~-~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 273 RKNAREVGLE-DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHTTCT-TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHcCCC-CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999999885 4799999999998765 589999997 3222 113445677777777776 999999874
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.11 E-value=2.4e-10 Score=103.76 Aligned_cols=109 Identities=19% Similarity=0.084 Sum_probs=84.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--------------CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--------------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--------------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.++.+|||+|||+|.++..+++. ....++|+|+++.+++.|+.++...++...++.+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 35679999999999999888753 2357999999999999999998877764225778899987766
Q ss_pred CCCCcccEEEEcccccCccc-----------------HHHHHHHHHHcccCCcEEEEEecc
Q 022248 190 VSDASVDAVVGTLVLCSVKD-----------------VDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.. +.||+|+++--+..... ...+++++.++|||||+++++.+.
T Consensus 250 ~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 250 PS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 44 48999999743332211 136799999999999999998853
No 258
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.10 E-value=6.4e-10 Score=97.82 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=99.9
Q ss_pred CCeEEEECCCCChhHHHhHhC------------------CCceEEEEcCC-----------HHHHHHHHHHHHHcCCCCC
Q 022248 126 AKKVLEIGIGTGPNLKYYAAD------------------TDVQVLGVDPN-----------RKMEKYAQTAAVAAGLPLT 176 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~~------------------~~~~~~giD~s-----------~~~~~~a~~~~~~~~~~~~ 176 (300)
..+|+|+||++|..+..+... +..+++..|+. +.+.+.+++ ..+.. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~-~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRK-I 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCC-T
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCC-C
Confidence 578999999999888766542 34788899987 333333211 12211 1
Q ss_pred CEEEEeccc---CcCCCCCCcccEEEEcccccCcccHH---------------------------------------HHH
Q 022248 177 NFKFLQAVG---EAIPVSDASVDAVVGTLVLCSVKDVD---------------------------------------MTL 214 (300)
Q Consensus 177 ~~~~~~~d~---~~~~~~~~~~D~v~~~~~l~~~~~~~---------------------------------------~~l 214 (300)
+..|+.+.. ..-.|+++++|+|+++.+|||+.+.. .+|
T Consensus 129 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 234555443 33468899999999999999984331 126
Q ss_pred HHHHHcccCCcEEEEEecccCCC--c-----hHHHHHHHhhhhh----hh---h-hcCCcccchHHHHHHHhc-CCcEEE
Q 022248 215 QEVRRVLKPGGIYLFVEHVAAKD--G-----TFLKFWQNVVDPL----QQ---I-VSDGCHLTRQTGNNISEA-GFSSVE 278 (300)
Q Consensus 215 ~~~~~~LkpgG~l~~~~~~~~~~--~-----~~~~~~~~~~~~~----~~---~-~~~~~~~~~~~~~~l~~a-Gf~~v~ 278 (300)
+..++.|+|||++++........ . .+...|..+.... .. . ....+.+.+|++.++++. +|++..
T Consensus 209 ~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 209 RIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEE
Confidence 66699999999999988766554 2 4444444332211 00 0 112356789999999998 588877
Q ss_pred Eeeec
Q 022248 279 LGNAF 283 (300)
Q Consensus 279 ~~~~~ 283 (300)
++...
T Consensus 289 le~~~ 293 (384)
T 2efj_A 289 LETFN 293 (384)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76543
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.09 E-value=1e-09 Score=97.41 Aligned_cols=107 Identities=13% Similarity=0.153 Sum_probs=84.2
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-C--------------------------------------CceEEEEcCCHHHHHHH
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-T--------------------------------------DVQVLGVDPNRKMEKYA 164 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~--------------------------------------~~~~~giD~s~~~~~~a 164 (300)
.++.+|||++||+|.++..++.. . ..+++|+|+++.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 46789999999999999887652 1 15799999999999999
Q ss_pred HHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccccc-Cc---ccHHHHHHHHHHcccC--CcEEEEEec
Q 022248 165 QTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVLC-SV---KDVDMTLQEVRRVLKP--GGIYLFVEH 232 (300)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~-~~---~~~~~~l~~~~~~Lkp--gG~l~~~~~ 232 (300)
++++...++. ++++|.++|+.+++.+ +.||+|+++--.. .+ .+...+++++.+.||+ ||.++++..
T Consensus 274 r~Na~~~gl~-~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 274 RENAEIAGVD-EYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHTCG-GGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHcCCC-CceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 9999998875 5799999999988754 5899999964322 11 2345667777777776 888888773
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.07 E-value=1.7e-09 Score=93.12 Aligned_cols=108 Identities=13% Similarity=0.039 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC---CcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD---ASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~D~v 198 (300)
.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++++..++. ++.++.+|+..++... +.||.|
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~--~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS--CCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC--SEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC--eEEEEeCChHhcCccccccCCCCEE
Confidence 46789999999999999999873 4579999999999999999999998874 8999999998775332 579999
Q ss_pred EEc------ccccCcc-----------cH-------HHHHHHHHHcccCCcEEEEEeccc
Q 022248 199 VGT------LVLCSVK-----------DV-------DMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 199 ~~~------~~l~~~~-----------~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
++. .++..-+ +. ..+|..+.++|+ ||+|+.++...
T Consensus 179 l~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 972 1221111 11 246777888887 99988876543
No 261
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.05 E-value=3.1e-09 Score=85.18 Aligned_cols=99 Identities=16% Similarity=0.036 Sum_probs=77.4
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCC--CCCCEEEEecccCcC--------------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGL--PLTNFKFLQAVGEAI-------------- 188 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~--~~~~~~~~~~d~~~~-------------- 188 (300)
+..+|||+||| +.+..+++..+.+++.+|.++...+.|++.++..++ . ++++++.+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEG-TEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTT-CEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-CceEEEEeCchhhhcccccccchhhhh
Confidence 56799999984 677777764468999999999999999999999886 4 6899999996432
Q ss_pred -C--------C-CCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 189 -P--------V-SDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 189 -~--------~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+ . ..++||+|+...- .....+..+.+.|+|||++++-+
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 2378999998752 22356677889999999996533
No 262
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.05 E-value=5.4e-10 Score=100.68 Aligned_cols=97 Identities=24% Similarity=0.297 Sum_probs=75.8
Q ss_pred CCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
++.+|||+|||+|.++..+++. ...+++|+|+++.+++.| .++.++++|+..... .+.||+|+++-
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~~~~-~~~fD~Ii~NP 106 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLLWEP-GEAFDLILGNP 106 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGGCCC-SSCEEEEEECC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhhcCc-cCCCCEEEECc
Confidence 5679999999999999999874 567999999999998776 278999999987653 47899999951
Q ss_pred cc---cC-------ccc-------------------HHHHHHHHHHcccCCcEEEEEecc
Q 022248 203 VL---CS-------VKD-------------------VDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 203 ~l---~~-------~~~-------------------~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
-. .. +.+ ...+++++.++|+|||+++++.+.
T Consensus 107 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 107 PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 11 11 111 125689999999999999998854
No 263
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.04 E-value=1.5e-09 Score=101.07 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCC--ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTD--VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~--~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 199 (300)
+..+|||||||+|.+....++ ..+ .+|++||.++ +...+++..+.+++. ++|+++.+|++++..+ +++|+||
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~-dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWG-SQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTG-GGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCC-CeEEEEeCcceeccCC-cccCEEE
Confidence 346799999999988444333 223 3789999997 667888888888886 7999999999998765 7899999
Q ss_pred EcccccCc--ccHHHHHHHHHHcccCCcEEE
Q 022248 200 GTLVLCSV--KDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 200 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~ 228 (300)
+=+.=..+ +....++....|.|||||.++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 73321111 334567888899999999864
No 264
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.04 E-value=2.6e-10 Score=100.93 Aligned_cols=101 Identities=14% Similarity=0.016 Sum_probs=81.8
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHc---------------CCCCCCEEEEecccCcC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAA---------------GLPLTNFKFLQAVGEAI 188 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~---------------~~~~~~~~~~~~d~~~~ 188 (300)
++.+|||+|||+|.++..++.. .+.+|+++|+++.+++.++++++.. ++. +++++.+|+..+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~--~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK--TIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS--EEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC--ceEEEcCcHHHH
Confidence 5789999999999999999875 4568999999999999999999988 663 599999998665
Q ss_pred C-CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 189 P-VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 189 ~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
. ...+.||+|++.- . .....++..+.+.|||||.+++..
T Consensus 125 ~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 1135799999532 1 233567899999999999887765
No 265
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=1.3e-09 Score=91.29 Aligned_cols=79 Identities=22% Similarity=0.312 Sum_probs=62.8
Q ss_pred HHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC---
Q 022248 116 SQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS--- 191 (300)
Q Consensus 116 ~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~--- 191 (300)
..+++.+. .++.+|||||||+|.++..+++. +.+++++|+++.+++.+++++.. .++++++.+|+.+++++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGGGSC
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHHHhc
Confidence 33444443 46789999999999999999875 47999999999999999998754 14899999999988764
Q ss_pred -CCcccEEEE
Q 022248 192 -DASVDAVVG 200 (300)
Q Consensus 192 -~~~~D~v~~ 200 (300)
++.|| |++
T Consensus 94 ~~~~~~-vv~ 102 (255)
T 3tqs_A 94 TDKPLR-VVG 102 (255)
T ss_dssp CSSCEE-EEE
T ss_pred cCCCeE-EEe
Confidence 35688 444
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=7.7e-10 Score=97.96 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=82.8
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCC-EEEEecccCcCC--CCCCcccEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTN-FKFLQAVGEAIP--VSDASVDAVV 199 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~d~~~~~--~~~~~~D~v~ 199 (300)
++.+|||++||+|.++..++.. .+ .+|+++|+++.+++.++++++.+++. .+ ++++.+|+..+. ...+.||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~-~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP-EDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 5789999999999999999874 23 68999999999999999999999985 34 999999986542 2246799999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.- ......++..+.+.|+|||++++..
T Consensus 131 lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 854 1223457889999999999888766
No 267
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.96 E-value=1.9e-09 Score=94.00 Aligned_cols=157 Identities=10% Similarity=0.083 Sum_probs=102.7
Q ss_pred CCCeEEEECCCCChhHHHhHhC-----------------CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec---c
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-----------------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA---V 184 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---d 184 (300)
...+|+|+||++|..+..+... +..+++..|+.......+.+.+.... ...+..|+.+ .
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-DVDGVCFINGVPGS 129 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-SCTTCEEEEEEESC
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-ccCCCEEEEecchh
Confidence 4578999999999777655432 34789999998888887776653211 0002244443 4
Q ss_pred cCcCCCCCCcccEEEEcccccCccc---------------------------------HHHHHHHHHHcccCCcEEEEEe
Q 022248 185 GEAIPVSDASVDAVVGTLVLCSVKD---------------------------------VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 185 ~~~~~~~~~~~D~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+..-.|+++++|+|+++.++||+.+ ...+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 4445788999999999999999743 2235888899999999999987
Q ss_pred cccCCCc-----------hHHHHHHHhhhhh--h-----h-hhcCCcccchHHHHHHHhcCC-cEEEEeee
Q 022248 232 HVAAKDG-----------TFLKFWQNVVDPL--Q-----Q-IVSDGCHLTRQTGNNISEAGF-SSVELGNA 282 (300)
Q Consensus 232 ~~~~~~~-----------~~~~~~~~~~~~~--~-----~-~~~~~~~~~~~~~~~l~~aGf-~~v~~~~~ 282 (300)
....... .+...|+.+.... . . .....+.+.+|++.++++.|. ++..++..
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~ 280 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEAS 280 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEE
Confidence 6554431 1222332222111 0 0 111235678999999999855 76666543
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.95 E-value=8.4e-08 Score=81.18 Aligned_cols=108 Identities=20% Similarity=0.270 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHc--C-CCCCCEEEEecccCcC-CCCCCcccEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAA--G-LPLTNFKFLQAVGEAI-PVSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~--~-~~~~~~~~~~~d~~~~-~~~~~~~D~v 198 (300)
+.+++||=||.|.|..++.+++.. ..+++.+|+++.+++.+++.+... + +..++++++.+|+... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 567899999999999999999854 468999999999999999987542 2 3347999999999764 3456789999
Q ss_pred EEcccccCcc----cHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVK----DVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+....-..-+ --..+++.+++.|+|||+++.-.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9753211111 11468899999999999999854
No 269
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.95 E-value=1.9e-09 Score=90.91 Aligned_cols=80 Identities=13% Similarity=0.210 Sum_probs=63.8
Q ss_pred HHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC-
Q 022248 116 SQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA- 193 (300)
Q Consensus 116 ~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~- 193 (300)
..+++.+. .++ +|||||||+|.++..+++. +.+++++|+++.+++.+++++.. .+++++.+|+.++++++.
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG-----LPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT-----SSEEEEESCGGGSCGGGSC
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC-----CCEEEEECChhhCChhhcc
Confidence 34444443 456 9999999999999999975 46999999999999999988641 489999999998877543
Q ss_pred cccEEEEcc
Q 022248 194 SVDAVVGTL 202 (300)
Q Consensus 194 ~~D~v~~~~ 202 (300)
.+|.|+++.
T Consensus 110 ~~~~iv~Nl 118 (271)
T 3fut_A 110 QGSLLVANL 118 (271)
T ss_dssp TTEEEEEEE
T ss_pred CccEEEecC
Confidence 688877654
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.94 E-value=5.2e-09 Score=87.32 Aligned_cols=88 Identities=16% Similarity=0.218 Sum_probs=65.3
Q ss_pred HHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC
Q 022248 115 KSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA 193 (300)
Q Consensus 115 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 193 (300)
...+++.+. .++.+|||||||+|.++..+++.+..+++++|+++.+++.++++ . ..+++++.+|+.++++++.
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~--~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G--DERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C--CTTEEEECSCTTTCCGGGS
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c--CCCeEEEEcchhhCChhHc
Confidence 334444443 46789999999999999999976457999999999999999876 1 2489999999999876542
Q ss_pred cccEEEEcccccCcc
Q 022248 194 SVDAVVGTLVLCSVK 208 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~ 208 (300)
.-+.++..+..+++.
T Consensus 94 ~~~~~vv~NlPy~i~ 108 (249)
T 3ftd_A 94 GKELKVVGNLPYNVA 108 (249)
T ss_dssp CSSEEEEEECCTTTH
T ss_pred cCCcEEEEECchhcc
Confidence 113455555555553
No 271
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.92 E-value=5e-09 Score=97.64 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=74.1
Q ss_pred CCeEEEECCCCChhHHHhHh-----C---------CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC
Q 022248 126 AKKVLEIGIGTGPNLKYYAA-----D---------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~-----~---------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 191 (300)
...|||||||+|.+....++ . ...+|++||.++.++..++.... +++. ++|+++.+|++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~-d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK-RRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT-TCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC-CeEEEEeCchhhcccc
Confidence 56899999999999643221 1 23499999999987766665554 6775 6799999999998653
Q ss_pred -----CCcccEEEEcccccCc--ccHHHHHHHHHHcccCCcEEE
Q 022248 192 -----DASVDAVVGTLVLCSV--KDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 192 -----~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~ 228 (300)
.+.+|+||+-+.=... +-...+|..+.+.|||||.++
T Consensus 488 ~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5789999985442222 223467788889999999765
No 272
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=1.7e-09 Score=92.55 Aligned_cols=76 Identities=13% Similarity=0.249 Sum_probs=64.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--CC---CCcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--VS---DASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--~~---~~~~D~ 197 (300)
.++.+|||+|||+|.++..+++. ++.+++|+|+++.+++.|+++++..+ .+++++++|+..++ +. .+.||.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 46789999999999999999875 36799999999999999999987765 48999999998764 11 157999
Q ss_pred EEEcc
Q 022248 198 VVGTL 202 (300)
Q Consensus 198 v~~~~ 202 (300)
|++..
T Consensus 102 Vl~D~ 106 (301)
T 1m6y_A 102 ILMDL 106 (301)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 99754
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.88 E-value=2.2e-09 Score=90.06 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=63.8
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCH-------HHHHHHHHHHHHcCCCCCCEEEEecccCcC-C-CCC--C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNR-------KMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P-VSD--A 193 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~-~~~--~ 193 (300)
++.+|||+|||+|.++..++.. +.+|+++|+++ .+++.|+++++..++. .+++++.+|++++ + +++ +
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~-~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA-ARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH-TTEEEEESCHHHHHHHHHHHHC
T ss_pred CcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc-cCeEEEECCHHHHHHhhhccCC
Confidence 5679999999999999999875 66999999999 9999998887666543 3599999999774 3 343 6
Q ss_pred cccEEEEccccc
Q 022248 194 SVDAVVGTLVLC 205 (300)
Q Consensus 194 ~~D~v~~~~~l~ 205 (300)
+||+|++.-...
T Consensus 161 ~fD~V~~dP~~~ 172 (258)
T 2r6z_A 161 KPDIVYLDPMYP 172 (258)
T ss_dssp CCSEEEECCCC-
T ss_pred CccEEEECCCCC
Confidence 899999865443
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.87 E-value=1.6e-08 Score=96.53 Aligned_cols=108 Identities=15% Similarity=0.072 Sum_probs=80.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-------------------------------------------CCceEEEEcCCHHH
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-------------------------------------------TDVQVLGVDPNRKM 160 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-------------------------------------------~~~~~~giD~s~~~ 160 (300)
.++..|||.+||+|.++..++.. ....++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 46779999999999998877641 12579999999999
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecccCcC--CCCCCcccEEEEc--ccccC--cccHHHHH---HHHHHcccCCcEEEEEe
Q 022248 161 EKYAQTAAVAAGLPLTNFKFLQAVGEAI--PVSDASVDAVVGT--LVLCS--VKDVDMTL---QEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 161 ~~~a~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~~--~~l~~--~~~~~~~l---~~~~~~LkpgG~l~~~~ 231 (300)
++.|++++...|+. ..++|.++|+.++ |...+.||+|+++ +.... -.+...++ .++.+.+.|||.++++.
T Consensus 269 v~~A~~N~~~agv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 269 IQRARTNARLAGIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHHHHHHTTCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHcCCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 99999999999985 4699999999887 3334489999997 32211 12333444 44445556899999976
Q ss_pred c
Q 022248 232 H 232 (300)
Q Consensus 232 ~ 232 (300)
.
T Consensus 348 ~ 348 (703)
T 3v97_A 348 A 348 (703)
T ss_dssp S
T ss_pred C
Confidence 3
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.86 E-value=2.3e-09 Score=89.73 Aligned_cols=128 Identities=19% Similarity=0.169 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCCChhHHHhHh--------CC-----CceEEEEcCCH---HHHH-----------HHHHHHHHc-----
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA--------DT-----DVQVLGVDPNR---KMEK-----------YAQTAAVAA----- 171 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~--------~~-----~~~~~giD~s~---~~~~-----------~a~~~~~~~----- 171 (300)
.+..+|||||+|+|..+..+++ .+ ..+++++|..+ +.+. .|++.+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 3567999999999998877543 22 25899999776 4444 455554431
Q ss_pred -----CCC--CCCEEEEecccCc-CCCCC----CcccEEEEc-ccccCccc--HHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 172 -----GLP--LTNFKFLQAVGEA-IPVSD----ASVDAVVGT-LVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 172 -----~~~--~~~~~~~~~d~~~-~~~~~----~~~D~v~~~-~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
.+. ..+++++.+|+.+ ++..+ ..||+|+.. +.....++ ...+++.+.++|+|||+|+... ..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys--aa- 215 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT--SA- 215 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC--CB-
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe--CC-
Confidence 011 1367789999866 44322 279999984 33332333 2578999999999999988633 11
Q ss_pred CchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 237 DGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
..+++.|.++||++....
T Consensus 216 --------------------------~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 216 --------------------------GFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp --------------------------HHHHHHHHHHTEEEEEEC
T ss_pred --------------------------HHHHHHHHHCCCEEEeCC
Confidence 156788889999977654
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.84 E-value=3.6e-09 Score=87.85 Aligned_cols=121 Identities=16% Similarity=0.125 Sum_probs=76.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||+|.++..+++. ....+.|+|+...+....... ...+ .++..+..+++...+.++.||+|+|..
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g---~~ii~~~~~~dv~~l~~~~~DlVlsD~ 148 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG---WNIITFKDKTDIHRLEPVKCDTLLCDI 148 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT---GGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC---CCeEEEeccceehhcCCCCccEEEecC
Confidence 56789999999999999987764 344678888874431000000 0001 144556666655667788999999987
Q ss_pred ccc----CcccHH--HHHHHHHHcccCC-cEEEEEecc--cCCCchHHHHHHHhh
Q 022248 203 VLC----SVKDVD--MTLQEVRRVLKPG-GIYLFVEHV--AAKDGTFLKFWQNVV 248 (300)
Q Consensus 203 ~l~----~~~~~~--~~l~~~~~~Lkpg-G~l~~~~~~--~~~~~~~~~~~~~~~ 248 (300)
+.+ .++... .+++.+.++|+|| |.|++-.+. ......+...++..+
T Consensus 149 apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F 203 (277)
T 3evf_A 149 GESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRF 203 (277)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred ccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhc
Confidence 666 222111 3468889999999 999997766 332233444444444
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=5.2e-09 Score=92.92 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=63.3
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHc--CCCCCCEEEEecccCcC-CC-CCCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAA--GLPLTNFKFLQAVGEAI-PV-SDASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~-~~-~~~~~D~v~~ 200 (300)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++.. ++ .+++++++|+.+. +. +++.||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 4789999999999999998864 679999999999999999999887 76 4899999999874 32 2358999998
Q ss_pred c
Q 022248 201 T 201 (300)
Q Consensus 201 ~ 201 (300)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 4
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.80 E-value=7.6e-08 Score=88.88 Aligned_cols=124 Identities=18% Similarity=0.094 Sum_probs=90.8
Q ss_pred HHHHHHHHHHhh--cCCCCeEEEECCCCChhHHHhHhC----CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc
Q 022248 111 VAGYKSQLFDNL--RGKAKKVLEIGIGTGPNLKYYAAD----TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV 184 (300)
Q Consensus 111 ~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~----~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d 184 (300)
+...+.+++... +.++.+|||.+||+|.++..+++. ....++|+|+++.+++.|+.++...++..+++.+..+|
T Consensus 205 Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gD 284 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNAD 284 (542)
T ss_dssp HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecc
Confidence 444444444422 135679999999999998888763 35689999999999999999988777754578899999
Q ss_pred cCcC--C-CCCCcccEEEEc--ccccC-----------------cc---c-HHHHHHHHHHccc-CCcEEEEEeccc
Q 022248 185 GEAI--P-VSDASVDAVVGT--LVLCS-----------------VK---D-VDMTLQEVRRVLK-PGGIYLFVEHVA 234 (300)
Q Consensus 185 ~~~~--~-~~~~~~D~v~~~--~~l~~-----------------~~---~-~~~~l~~~~~~Lk-pgG~l~~~~~~~ 234 (300)
.... | .....||+|+++ +...+ ++ + .-.+++.+.+.|+ |||++.++.+..
T Consensus 285 tL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 285 TLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp TTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred eecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 8765 3 456789999985 11110 10 0 1247899999999 999999988543
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.79 E-value=8.3e-09 Score=95.56 Aligned_cols=111 Identities=14% Similarity=0.013 Sum_probs=82.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC----C---------------CceEEEEcCCHHHHHHHHHHHHHcCCCC---CCEEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD----T---------------DVQVLGVDPNRKMEKYAQTAAVAAGLPL---TNFKFL 181 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~----~---------------~~~~~giD~s~~~~~~a~~~~~~~~~~~---~~~~~~ 181 (300)
.++.+|||.|||+|.++..+++. . ...++|+|+++.+++.|+.++...++.. .++.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 35679999999999998887652 1 2479999999999999999887766541 026788
Q ss_pred ecccCcCC-CCCCcccEEEEcccccCcc-------------c-HHHHHHHHHHcccCCcEEEEEeccc
Q 022248 182 QAVGEAIP-VSDASVDAVVGTLVLCSVK-------------D-VDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 182 ~~d~~~~~-~~~~~~D~v~~~~~l~~~~-------------~-~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
++|....+ ...+.||+|+++--..... + ...++.++.+.|||||++.++.+..
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 88876543 3457899999863222111 1 2368999999999999999987543
No 280
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.79 E-value=1.5e-08 Score=85.82 Aligned_cols=69 Identities=13% Similarity=0.174 Sum_probs=55.4
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHhCCC---ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTD---VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~---~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 191 (300)
.+++.+. .++.+|||||||+|.++..+++... .+++++|+++.+++.++++. . ++++++++|+.+++++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~----~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G----ELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G----GGEEEEESCGGGCCGG
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C----CCcEEEECChhcCChh
Confidence 3444443 4678999999999999999987432 33999999999999999883 1 4899999999998764
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.74 E-value=9.6e-09 Score=85.81 Aligned_cols=68 Identities=13% Similarity=0.197 Sum_probs=53.3
Q ss_pred HHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCce--EEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC
Q 022248 117 QLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQ--VLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 117 ~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~--~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 191 (300)
.+++.+. .++.+|||||||+|.++. +.. +.+ ++++|+++.+++.+++++... ++++++.+|+..++++
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDAMTFNFG 82 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCGGGCCHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC----CceEEEECchhhCCHH
Confidence 3444433 467899999999999999 754 346 999999999999998876432 4899999999988754
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.67 E-value=5.6e-08 Score=89.92 Aligned_cols=110 Identities=17% Similarity=0.090 Sum_probs=80.9
Q ss_pred cCCCCeEEEECCCCChhHHHhHhC----------------CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAAD----------------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE 186 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~----------------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~ 186 (300)
.+...+|||.+||+|.++..+++. ....++|+|+++.+++.|+.++...++. .++.+.++|..
T Consensus 242 ~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-~~i~i~~gDtL 320 (544)
T 3khk_A 242 EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID-FNFGKKNADSF 320 (544)
T ss_dssp CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC-CBCCSSSCCTT
T ss_pred hcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC-cccceeccchh
Confidence 334459999999999988877531 0468999999999999999998887775 24445778865
Q ss_pred cCC-CCCCcccEEEEcc--cccC-----------------------cc----cHHHHHHHHHHcccCCcEEEEEecc
Q 022248 187 AIP-VSDASVDAVVGTL--VLCS-----------------------VK----DVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 187 ~~~-~~~~~~D~v~~~~--~l~~-----------------------~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
..+ +.+..||+|+++= .... ++ ..-.+++.+.+.|+|||++.++.+.
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 543 4567899999842 2110 11 0125789999999999999998753
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.59 E-value=3e-08 Score=82.42 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=69.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+|||.|.++..++.. ....++|+|+...+...+... ...+ .++..+..+++...++.+.+|+|+|..
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g---~~ii~~~~~~dv~~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG---WNLIRFKDKTDVFNMEVIPGDTLLCDI 164 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT---GGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC---CceEEeeCCcchhhcCCCCcCEEEecC
Confidence 57779999999999999988753 445688999976532221100 0001 133333333333345668999999988
Q ss_pred ccc----CcccHH--HHHHHHHHcccCC--cEEEEEecc
Q 022248 203 VLC----SVKDVD--MTLQEVRRVLKPG--GIYLFVEHV 233 (300)
Q Consensus 203 ~l~----~~~~~~--~~l~~~~~~Lkpg--G~l~~~~~~ 233 (300)
+.. .++... .++.-+.++|+|| |.|++-.+.
T Consensus 165 ApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 165 GESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 776 111111 3577778999999 999998876
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.59 E-value=1.6e-07 Score=82.04 Aligned_cols=108 Identities=19% Similarity=0.123 Sum_probs=79.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHc---CCC---CCCEEEEecccCcC----CCCCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAA---GLP---LTNFKFLQAVGEAI----PVSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~---~~~---~~~~~~~~~d~~~~----~~~~~ 193 (300)
.++++||=||.|.|..++.+++.+..+++.+|+++.+++.+++.+... .+. .++++++.+|+... .-..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 456899999999999999999866678999999999999999875321 111 23588999988543 12346
Q ss_pred cccEEEEcccccC-------ccc---HHHHHHHHHHcccCCcEEEEEe
Q 022248 194 SVDAVVGTLVLCS-------VKD---VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 194 ~~D~v~~~~~l~~-------~~~---~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.||+|+....-.. ... ...+++.+++.|+|||+++.-.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999997532211 111 1467899999999999988743
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.58 E-value=4.9e-08 Score=81.57 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=66.0
Q ss_pred CeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcC--------CCCCCEEEEecccCcC-CCCCCcccE
Q 022248 127 KKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAG--------LPLTNFKFLQAVGEAI-PVSDASVDA 197 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~--------~~~~~~~~~~~d~~~~-~~~~~~~D~ 197 (300)
.+|||+|||+|..+..++.. +.+|+++|.++.+.+.+++.++... +. .+++++++|+.++ +...+.||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~-~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQ-ERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH-HHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh-cCEEEEECCHHHHHHhCcccCCE
Confidence 79999999999999999875 5589999999988777766654321 11 3799999998763 322347999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCc
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGG 225 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG 225 (300)
|++.-...+- .....+++..++|++.+
T Consensus 168 V~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 168 VYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 9987555442 22244556666666644
No 286
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.57 E-value=4.2e-07 Score=76.74 Aligned_cols=107 Identities=15% Similarity=0.079 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC------CCceEEEEcCCHH--------------------------HHHHHHHHHHHc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD------TDVQVLGVDPNRK--------------------------MEKYAQTAAVAA 171 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~------~~~~~~giD~s~~--------------------------~~~~a~~~~~~~ 171 (300)
..++.|||+|+..|..+..++.. .+.+++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 35679999999999988887652 3678999996421 467788999998
Q ss_pred CCCCCCEEEEecccCc-CC-CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 172 GLPLTNFKFLQAVGEA-IP-VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 172 ~~~~~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
++..++++++.+++.+ ++ +++++||+|+...-. .......++.+...|+|||++++-+.
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 8744699999999965 44 445789999987632 23445778999999999998888553
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.47 E-value=8.1e-07 Score=84.22 Aligned_cols=110 Identities=14% Similarity=0.055 Sum_probs=75.2
Q ss_pred CCCeEEEECCCCChhHHHhHhCC----CceEEEEcCCHHHHHHH--HHHHHHcCCC--CCCEEEEecccCcC-CCCCCcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADT----DVQVLGVDPNRKMEKYA--QTAAVAAGLP--LTNFKFLQAVGEAI-PVSDASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~----~~~~~giD~s~~~~~~a--~~~~~~~~~~--~~~~~~~~~d~~~~-~~~~~~~ 195 (300)
++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +..+....+. .....+...|+... +...+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 57899999999999999988643 35799999999999999 4443321111 12335556666553 2345789
Q ss_pred cEEEEcccc--c-Ccc-------------------------c-HHHHHHHHHHcccCCcEEEEEeccc
Q 022248 196 DAVVGTLVL--C-SVK-------------------------D-VDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 196 D~v~~~~~l--~-~~~-------------------------~-~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|+|+++=-. . ... + ...+++.+.+.|+|||++.++.+..
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 999985222 0 000 1 2346888999999999999988543
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.45 E-value=3.8e-06 Score=72.98 Aligned_cols=122 Identities=11% Similarity=0.073 Sum_probs=81.0
Q ss_pred cCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 123 RGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 123 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..++.++||+||++|.++..+++. +..|++||+.+ +-..... .++|+++.+|+.....+.+.||+|+|..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~~l~~--------~~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQSLMD--------TGQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCHHHHT--------TTCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cChhhcc--------CCCeEEEeCccccccCCCCCcCEEEEcC
Confidence 458899999999999999999875 56999999864 2222111 2589999999988876778899999966
Q ss_pred cccCcccHHHHHHHHHHcccCC---cEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCc
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPG---GIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFS 275 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~Lkpg---G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 275 (300)
+. ++...+..+.++|..+ +.++.+-... .. ....+... ...+.+.|+..||.
T Consensus 279 ~~----~p~~~~~l~~~wl~~~~~~~aI~~lKL~m--k~-~~~~l~~~--------------~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 279 VE----KPAKVAALMAQWLVNGWCRETIFNLKLPM--KK-RYEEVSHN--------------LAYIQAQLDEHGIN 333 (375)
T ss_dssp SS----CHHHHHHHHHHHHHTTSCSEEEEEEECCS--SS-HHHHHHHH--------------HHHHHHHHHHTTCC
T ss_pred CC----ChHHhHHHHHHHHhccccceEEEEEEecc--cc-hHHHHHHH--------------HHHHHHHHHhcCcc
Confidence 54 3444555555555443 5544443221 11 11222111 12677888899997
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.32 E-value=1.2e-06 Score=73.19 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=64.3
Q ss_pred HHHHHHhhc-CCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----
Q 022248 115 KSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---- 189 (300)
Q Consensus 115 ~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---- 189 (300)
+.++++.+. .++..+||.+||.|..+..+++. +.+++|+|.++.+++.|++ +.. +++.++.+++..++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcchHHHHHH
Confidence 344444444 46789999999999999999987 7799999999999999988 532 48999999998763
Q ss_pred -CCCCcccEEEEcc
Q 022248 190 -VSDASVDAVVGTL 202 (300)
Q Consensus 190 -~~~~~~D~v~~~~ 202 (300)
...+.+|.|++..
T Consensus 84 ~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 84 ALGVERVDGILADL 97 (285)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred HcCCCCcCEEEeCC
Confidence 1235799999743
No 290
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.30 E-value=3.5e-06 Score=73.62 Aligned_cols=113 Identities=12% Similarity=0.011 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCC----CCCEEEEecccCcCC-CCCCcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLP----LTNFKFLQAVGEAIP-VSDASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~~D~ 197 (300)
.++.+|||+++|.|.-+.+|++. ....++++|+++.-++.++++++..+.. ..++.+...|...++ ...+.||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 57889999999999998888874 3357999999999999999999876642 247888888887763 34578999
Q ss_pred EEE----cc----cccCccc----------------HHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 198 VVG----TL----VLCSVKD----------------VDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 198 v~~----~~----~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
|++ +. .+..-++ ..++|....+.|||||+|+.++....+
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 995 22 1111111 135788999999999999998755433
No 291
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.30 E-value=1.8e-07 Score=100.20 Aligned_cols=147 Identities=20% Similarity=0.151 Sum_probs=71.9
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC------CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT------DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D 196 (300)
.+..+|||||.|+|..+..+.+.. ..+++..|+|+...+.|+++++.. ++....-|.... ++..+.||
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-----di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-----HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-----TEEEECCCSSCCCC-----CC
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-----ccccccccccccccCCCCcee
Confidence 356799999999998766654421 347999999998888888776543 233322233232 34557899
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecccCC-CchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAK-DGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFS 275 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 275 (300)
+|++.+++|..++....+.+++++|||||++++.+..... .+....++... ......+.+.++|.++|..+||.
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~-----~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSP-----EQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC-------------------------------CTTTTSSTTTTEE
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccc-----cccCCcccCHHHHHHHHHhCCCc
Confidence 9999999998888899999999999999999997743210 01111111100 00112345667899999999999
Q ss_pred EEEEe
Q 022248 276 SVELG 280 (300)
Q Consensus 276 ~v~~~ 280 (300)
.+.+.
T Consensus 1389 ~~~~~ 1393 (2512)
T 2vz8_A 1389 LVALK 1393 (2512)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 87664
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.28 E-value=1.9e-06 Score=72.12 Aligned_cols=120 Identities=14% Similarity=0.065 Sum_probs=73.4
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+|||+||++|.++..+++. ....++|+|+...+...... ....+ .++.....+.....+..+.+|+|+|..
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~---~~iv~~~~~~di~~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG---WNIVKFKDKSNVFTMPTEPSDTLLCDI 155 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT---GGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC---CceEEeecCceeeecCCCCcCEEeecC
Confidence 67889999999999999999874 34478899987532110000 00000 122222332232334567899999977
Q ss_pred cccCccc----H---HHHHHHHHHcccCC-cEEEEEecc--cCCCchHHHHHHHhh
Q 022248 203 VLCSVKD----V---DMTLQEVRRVLKPG-GIYLFVEHV--AAKDGTFLKFWQNVV 248 (300)
Q Consensus 203 ~l~~~~~----~---~~~l~~~~~~Lkpg-G~l~~~~~~--~~~~~~~~~~~~~~~ 248 (300)
+.. ... . ..++.-+.++|+|| |.|++-.+. ......+...++..+
T Consensus 156 APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F 210 (300)
T 3eld_A 156 GES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRF 210 (300)
T ss_dssp CCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHH
T ss_pred cCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhC
Confidence 666 321 1 23477778999999 999998776 333333444444444
No 293
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.25 E-value=1.8e-06 Score=64.53 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=59.1
Q ss_pred CCCeEEEECCCCC-hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCC-CcccEEEEcc
Q 022248 125 KAKKVLEIGIGTG-PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSD-ASVDAVVGTL 202 (300)
Q Consensus 125 ~~~~vLDiGcG~G-~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 202 (300)
++.+|||||||.| ..+..|++..+..|+++|+++.+++ +++.|+.+..... +.||+|.+..
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~-----------------~v~dDiF~P~~~~Y~~~DLIYsir 97 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG-----------------IVRDDITSPRMEIYRGAALIYSIR 97 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT-----------------EECCCSSSCCHHHHTTEEEEEEES
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc-----------------eEEccCCCCcccccCCcCEEEEcC
Confidence 5679999999999 5888888757889999999996543 7888886643211 4799998765
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-.. +....+.++.+ +-|.-+++...
T Consensus 98 PP~---El~~~i~~lA~--~v~adliI~pL 122 (153)
T 2k4m_A 98 PPA---EIHSSLMRVAD--AVGARLIIKPL 122 (153)
T ss_dssp CCT---TTHHHHHHHHH--HHTCEEEEECB
T ss_pred CCH---HHHHHHHHHHH--HcCCCEEEEcC
Confidence 333 33334444444 23566666553
No 294
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.05 E-value=0.00018 Score=62.28 Aligned_cols=149 Identities=10% Similarity=0.154 Sum_probs=100.1
Q ss_pred CCCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCC-------------------CCCCEEEEec
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGL-------------------PLTNFKFLQA 183 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~-------------------~~~~~~~~~~ 183 (300)
.+...|+.+|||.......+... .+..++-||. +.+++.-++.+...+. ..++..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35678999999999988888753 5778888888 7777777777665420 1257899999
Q ss_pred ccCcCCC---------CCCcccEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccC---CCchHHHHHHHhhh
Q 022248 184 VGEAIPV---------SDASVDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAA---KDGTFLKFWQNVVD 249 (300)
Q Consensus 184 d~~~~~~---------~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~~~ 249 (300)
|+.+... ..+...++++-.++.+++. ...+++.+.+.. |+|.+++.+.... .+ .+...+...+.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~-~fg~~m~~~l~ 252 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPND-RFGAIMQSNLK 252 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTC-CHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcc-hHHHHHHHHhh
Confidence 9876321 2356788889899999854 356788888876 7888887776544 22 22222222221
Q ss_pred h-hhh-hh-cCCcccchHHHHHHHhcCCc
Q 022248 250 P-LQQ-IV-SDGCHLTRQTGNNISEAGFS 275 (300)
Q Consensus 250 ~-~~~-~~-~~~~~~~~~~~~~l~~aGf~ 275 (300)
. .+. .. ...+.+.++..+.|.++||+
T Consensus 253 ~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 253 ESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred cccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1 111 11 11345788899999999997
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.04 E-value=5.4e-05 Score=63.12 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=70.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec-ccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA-VGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+||++|.++...+...+ ..|+|+|+-..-.+.-+ ..+..++ .-|.|+.+ |+..++- ..+|+|+|.
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w--~lV~~~~~~Dv~~l~~--~~~D~ivcD 167 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGW--NIVTMKSGVDVFYRPS--ECCDTLLCD 167 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTG--GGEEEECSCCTTSSCC--CCCSEEEEC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCC--cceEEEeccCHhhCCC--CCCCEEEEE
Confidence 5778999999999999997776444 46999998664110000 0001122 24788887 8766653 669999997
Q ss_pred ccccCcccH-------HHHHHHHHHcccCC-cEEEEEeccc
Q 022248 202 LVLCSVKDV-------DMTLQEVRRVLKPG-GIYLFVEHVA 234 (300)
Q Consensus 202 ~~l~~~~~~-------~~~l~~~~~~Lkpg-G~l~~~~~~~ 234 (300)
-. +.-+++ ..+|+-+.++|++| |-|++-.+.+
T Consensus 168 ig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 168 IG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred Cc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 66 444433 23567778899998 8888877655
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.00 E-value=3.5e-05 Score=63.09 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=64.2
Q ss_pred hcCCCCeEEEECCCCChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCC--CC---EEEEec-ccCcCCCCCCc
Q 022248 122 LRGKAKKVLEIGIGTGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPL--TN---FKFLQA-VGEAIPVSDAS 194 (300)
Q Consensus 122 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~--~~---~~~~~~-d~~~~~~~~~~ 194 (300)
+.+++.+|||+||+.|.++..+++..+. .+.|.++.... . ...... .. +.|+.+ |+..++ ...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCCccCCC--CCC
Confidence 4468999999999999999998875222 33444433220 0 001100 12 355556 887653 458
Q ss_pred ccEEEEcccccCcc----cHH---HHHHHHHHcccCCc-EEEEEecc
Q 022248 195 VDAVVGTLVLCSVK----DVD---MTLQEVRRVLKPGG-IYLFVEHV 233 (300)
Q Consensus 195 ~D~v~~~~~l~~~~----~~~---~~l~~~~~~LkpgG-~l~~~~~~ 233 (300)
+|+|+|..+.. -. |.. .+|.-+.++|+||| .|++-.+.
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 99999977654 32 221 25667779999999 99998876
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.90 E-value=0.00011 Score=67.73 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCCCeEEEECCCCChhHHHhHhC--------------CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAAD--------------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~--------------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.++.+|+|.+||+|.++..+.+. ....++|+|+++.+...|+.++--.+.. ...+..+|....+
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~--~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE--YPRIDPENSLRFP 293 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS--CCEEECSCTTCSC
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc--cccccccccccCc
Confidence 35679999999999998776541 1246999999999999999887776764 3456777765543
Q ss_pred C----CCCcccEEEEccccc--Cc-------------cc-HHHHHHHHHHccc-------CCcEEEEEecc
Q 022248 190 V----SDASVDAVVGTLVLC--SV-------------KD-VDMTLQEVRRVLK-------PGGIYLFVEHV 233 (300)
Q Consensus 190 ~----~~~~~D~v~~~~~l~--~~-------------~~-~~~~l~~~~~~Lk-------pgG~l~~~~~~ 233 (300)
. ....||+|+++=-.. .. .+ ...+++.+.+.|| |||++.++.+.
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 2 235799999853221 10 01 1346788888886 79999998864
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.87 E-value=4.6e-05 Score=61.46 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=72.0
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec-ccCcCCCCCCcccEEEEc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA-VGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v~~~ 201 (300)
.++.+|||+||++|.++...+...+ ..|+|+|+-..-.+.- ...+..|+ ..++|+.+ |+..++- ..+|.|+|.
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gw--n~v~fk~gvDv~~~~~--~~~DtllcD 151 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGW--NIVKLMSGKDVFYLPP--EKCDTLLCD 151 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTT--TSEEEECSCCGGGCCC--CCCSEEEEC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCc--CceEEEeccceeecCC--ccccEEEEe
Confidence 5778999999999999997776434 4699999866432100 00122334 37899999 8766642 679999997
Q ss_pred ccccCcccH-------HHHHHHHHHcccCCcEEEEEecccCC
Q 022248 202 LVLCSVKDV-------DMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 202 ~~l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
..-. -+++ ..+|+-+.++|++ |-+++-.+.+..
T Consensus 152 IgeS-s~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 152 IGES-SPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCC-CSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred cCCC-CCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 6552 2222 2367777899998 788887665543
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.84 E-value=4.3e-05 Score=65.27 Aligned_cols=58 Identities=21% Similarity=0.147 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHc
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAA 171 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~ 171 (300)
.+...++.....++..|||++||+|..+..++. .+.+++|+|+++.+++.|+++++..
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 344555555556788999999999999988875 5679999999999999999998765
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.81 E-value=0.0028 Score=54.15 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=97.8
Q ss_pred CCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCC-CCCCEEEEecccCcCC---------CCCCcc
Q 022248 126 AKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGL-PLTNFKFLQAVGEAIP---------VSDASV 195 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~-~~~~~~~~~~d~~~~~---------~~~~~~ 195 (300)
...|+++|||-=.....+....+..++-|| .+.+++..++.+...+. ..++..++.+|+.+ . +.....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 357999999988776666422347899999 58899998888876442 23578889999875 2 222345
Q ss_pred cEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHH----Hhhhhhh-----hhhcC-Cccc-c
Q 022248 196 DAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQ----NVVDPLQ-----QIVSD-GCHL-T 262 (300)
Q Consensus 196 D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~-~~~~-~ 262 (300)
=++++-.+++++++ ...+++.+...+.||+.+++....... ........ +.+.... ....- .+.+ .
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG-DEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC-SHHHHHHHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC-cchhHHHHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 57778889999864 356889998988899988886644322 11111112 1121111 00111 1224 6
Q ss_pred hHHHHHHHhcCCcEEEE
Q 022248 263 RQTGNNISEAGFSSVEL 279 (300)
Q Consensus 263 ~~~~~~l~~aGf~~v~~ 279 (300)
+++.+.|.+.||+.+..
T Consensus 260 ~~~~~~f~~~G~~~~~~ 276 (310)
T 2uyo_A 260 AVVADWLNRHGWRATAQ 276 (310)
T ss_dssp CCHHHHHTTTTEEEEEE
T ss_pred HHHHHHHHHCcCccccC
Confidence 79999999999998743
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.69 E-value=0.00036 Score=58.16 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=64.4
Q ss_pred CCCCeEEEECC------CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccE
Q 022248 124 GKAKKVLEIGI------GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGc------G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 197 (300)
+.+.+|||+|+ -.|.+...-....+..++++|+.+-.. . .. .++++|...+.. .+.||+
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------d--a~-~~IqGD~~~~~~-~~k~DL 172 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------D--AD-STLIGDCATVHT-ANKWDL 172 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------S--SS-EEEESCGGGEEE-SSCEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------C--CC-eEEEcccccccc-CCCCCE
Confidence 57899999996 556532221112335999999977321 0 12 459999766543 478999
Q ss_pred EEEcccccCc-----cc------HHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 198 VVGTLVLCSV-----KD------VDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 198 v~~~~~l~~~-----~~------~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
|++..+...- +. .+.++.-+.++|+|||.|++-.+....
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 9986543321 11 245677788899999999998765443
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.63 E-value=0.0002 Score=60.80 Aligned_cols=128 Identities=15% Similarity=0.194 Sum_probs=76.5
Q ss_pred CCCeEEEECCCCChhHHHhHh-----CCC--ceEEEEcCCH--------H-HHHHHHHHHHHcC-CCCC--CEEEEeccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA-----DTD--VQVLGVDPNR--------K-MEKYAQTAAVAAG-LPLT--NFKFLQAVG 185 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~-----~~~--~~~~giD~s~--------~-~~~~a~~~~~~~~-~~~~--~~~~~~~d~ 185 (300)
+.-+|||+|-|+|........ .+. .+++.+|..+ . .-+..+....... .... .+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 456899999999975433221 233 3566666421 1 1111222222211 1112 345677887
Q ss_pred Cc-CC-CCCCcccEEEEcc-cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcc
Q 022248 186 EA-IP-VSDASVDAVVGTL-VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCH 260 (300)
Q Consensus 186 ~~-~~-~~~~~~D~v~~~~-~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (300)
.+ ++ +.+..||+|+... +...-|++ ..+++.++++++|||.|.... ..
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt--aa------------------------- 228 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS--SS------------------------- 228 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC--CC-------------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe--Cc-------------------------
Confidence 54 33 4455799999743 22222333 578999999999999887633 11
Q ss_pred cchHHHHHHHhcCCcEEEEee
Q 022248 261 LTRQTGNNISEAGFSSVELGN 281 (300)
Q Consensus 261 ~~~~~~~~l~~aGf~~v~~~~ 281 (300)
..++..|+++||++....-
T Consensus 229 --g~VRR~L~~aGF~V~k~~G 247 (308)
T 3vyw_A 229 --LSVRKSLLTLGFKVGSSRE 247 (308)
T ss_dssp --HHHHHHHHHTTCEEEEEEC
T ss_pred --HHHHHHHHHCCCEEEecCC
Confidence 2678899999999877753
No 303
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.43 E-value=0.00034 Score=58.37 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=47.2
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAG 172 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~ 172 (300)
.++..++.....++..|||..||+|..+.+..+ .+.+++|+|+++.+++.++++++..+
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~-~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKK-LGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 344555555556889999999999999888765 57799999999999999999987543
No 304
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.40 E-value=0.037 Score=47.69 Aligned_cols=165 Identities=10% Similarity=0.112 Sum_probs=100.6
Q ss_pred HHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcC-----------------
Q 022248 112 AGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAG----------------- 172 (300)
Q Consensus 112 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~----------------- 172 (300)
...+.+++... .+...|+-+|||-=.....+... .+..++=||. +++++.=++.+...+
T Consensus 78 D~~v~~fl~~~-~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~ 155 (334)
T 3iei_A 78 SQLIKAFLRKT-ECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQM 155 (334)
T ss_dssp HHHHHHHHHHT-TTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBC
T ss_pred HHHHHHHHHhC-CCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhccccccccccc
Confidence 34444444443 14578999999998877777653 3678888887 444444333333210
Q ss_pred ----CCCCCEEEEecccCcC----------CCCCCcccEEEEcccccCccc--HHHHHHHHHHcccCCcEEEEEecccCC
Q 022248 173 ----LPLTNFKFLQAVGEAI----------PVSDASVDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGGIYLFVEHVAAK 236 (300)
Q Consensus 173 ----~~~~~~~~~~~d~~~~----------~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~ 236 (300)
+..++..++.+|+.+. .+..+..=++++-.++.+++. ...+++.+.+.. |+|.+++.+.....
T Consensus 156 ~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~ 234 (334)
T 3iei_A 156 DGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG 234 (334)
T ss_dssp CTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT
T ss_pred ccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC
Confidence 1135788999998653 134455567888888888853 356777777765 56677777766443
Q ss_pred CchHHHHHHHhhhhhhhhhc--CCcccchHHHHHHHhcCCcEEEEe
Q 022248 237 DGTFLKFWQNVVDPLQQIVS--DGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
+ .+...+.+.+...+.... ..+.+.++..+.|.++||+.++..
T Consensus 235 d-~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 235 D-RFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp S-HHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred C-HHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 3 333333333222211111 124566888999999999987654
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.28 E-value=0.00055 Score=58.58 Aligned_cols=84 Identities=12% Similarity=0.158 Sum_probs=63.7
Q ss_pred HHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhC--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-
Q 022248 114 YKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP- 189 (300)
Q Consensus 114 ~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~- 189 (300)
++.+.++.+. .++..++|..||.|..+..+++. +..+++|+|.++.+++.++ ++ ..++++++.+++..+.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~~~Rv~lv~~nF~~l~~ 118 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----DDPRFSIIHGPFSALGE 118 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----CCTTEEEEESCGGGHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----cCCcEEEEeCCHHHHHH
Confidence 4455555555 57889999999999999999874 4579999999999999884 33 1258999999987753
Q ss_pred ----CC-CCcccEEEEccc
Q 022248 190 ----VS-DASVDAVVGTLV 203 (300)
Q Consensus 190 ----~~-~~~~D~v~~~~~ 203 (300)
.. .+++|.|+....
T Consensus 119 ~L~~~g~~~~vDgILfDLG 137 (347)
T 3tka_A 119 YVAERDLIGKIDGILLDLG 137 (347)
T ss_dssp HHHHTTCTTCEEEEEEECS
T ss_pred HHHhcCCCCcccEEEECCc
Confidence 11 136999997543
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.18 E-value=0.0099 Score=52.22 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=67.9
Q ss_pred CeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC--------CCCcccEE
Q 022248 127 KKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV--------SDASVDAV 198 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~~D~v 198 (300)
.+++|+-||.|.++..+.......+.++|+++.+++..+.+. ++..++.+|+.++.. ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 589999999999998887654445779999999988887764 466788889877631 34679999
Q ss_pred EEcccccCc--------ccHH-HHHHH---HHHcccCCcEEEEEecccC
Q 022248 199 VGTLVLCSV--------KDVD-MTLQE---VRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 199 ~~~~~l~~~--------~~~~-~~l~~---~~~~LkpgG~l~~~~~~~~ 235 (300)
+...-...+ .|.. .++.+ +...++|. +++.+++..
T Consensus 76 ~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~g 122 (376)
T 3g7u_A 76 IGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPG 122 (376)
T ss_dssp EECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTT
T ss_pred EecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchH
Confidence 975543333 2222 23333 44445774 566666554
No 307
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.18 E-value=0.0018 Score=56.27 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=53.5
Q ss_pred CCeEEEECCCCChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC---CCCcccEEEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV---SDASVDAVVG 200 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~D~v~~ 200 (300)
..+|+|+.||.|.+...+.... ...+.++|+++.+++..+.+. +...++.+|+.++.. +...+|+|+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~-------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF-------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc-------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 3589999999999999887643 236899999999999988875 244567888877641 1125899997
Q ss_pred ccc
Q 022248 201 TLV 203 (300)
Q Consensus 201 ~~~ 203 (300)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 644
No 308
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.11 E-value=0.013 Score=50.48 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC--CceE-EEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC---CCCCcccE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT--DVQV-LGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---VSDASVDA 197 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~-~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~ 197 (300)
....+++|+.||.|.+...+.... ...+ .++|+++.+.+..+.+.. .. ++.+|+.++. ++...+|+
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~-------~~-~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK-------EE-VQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC-------CC-CBCCCTTTCCHHHHHHTCCCE
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC-------CC-cccCChhhcCHHHhccCCCCE
Confidence 345689999999999998887643 1345 699999999988888762 22 5677777663 22236899
Q ss_pred EEEcccccCc-----------ccHH-HHHHHHHH-cccC---CcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCccc
Q 022248 198 VVGTLVLCSV-----------KDVD-MTLQEVRR-VLKP---GGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHL 261 (300)
Q Consensus 198 v~~~~~l~~~-----------~~~~-~~l~~~~~-~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (300)
++...-...+ .|.. .++.++.+ +++. .-.+++.+++..-... ..
T Consensus 80 l~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~--------------------~~ 139 (327)
T 3qv2_A 80 WFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKES--------------------LV 139 (327)
T ss_dssp EEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGS--------------------HH
T ss_pred EEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcCh--------------------HH
Confidence 9976544433 2332 45666666 5532 2456777766532110 01
Q ss_pred chHHHHHHHhcCCcEEE
Q 022248 262 TRQTGNNISEAGFSSVE 278 (300)
Q Consensus 262 ~~~~~~~l~~aGf~~v~ 278 (300)
.+.+.+.|++.||.+..
T Consensus 140 ~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 140 FKEIYNILIKNQYYIKD 156 (327)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 24777888999998543
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.96 E-value=0.002 Score=55.95 Aligned_cols=59 Identities=14% Similarity=0.103 Sum_probs=49.4
Q ss_pred CCCeEEEECCCCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI 188 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 188 (300)
++..|||||.|.|.++..|++. ...+++++|+++..+...++.. . .++++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E----GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T----TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c----CCCEEEEECCccch
Confidence 3588999999999999999974 3458999999999999988775 2 25899999999654
No 310
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.95 E-value=0.012 Score=48.69 Aligned_cols=113 Identities=19% Similarity=0.288 Sum_probs=74.0
Q ss_pred HHHhhcCCCCeEEEECCCCChhHHHhHh--------CCCceEEEEc-----CCHH-------------------HHHHHH
Q 022248 118 LFDNLRGKAKKVLEIGIGTGPNLKYYAA--------DTDVQVLGVD-----PNRK-------------------MEKYAQ 165 (300)
Q Consensus 118 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~--------~~~~~~~giD-----~s~~-------------------~~~~a~ 165 (300)
+.+.+..-++.|+|+|+-.|..+..++. ....+++++| +... ..+..+
T Consensus 62 l~~~i~~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~ 141 (257)
T 3tos_A 62 LYRQVLDVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLK 141 (257)
T ss_dssp HHHHTTTSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHH
T ss_pred HHHHhhCCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHH
Confidence 3444444567999999999987777653 1357899998 3210 111122
Q ss_pred HHHH------HcCCCCCCEEEEecccCc-CC-----CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 166 TAAV------AAGLPLTNFKFLQAVGEA-IP-----VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 166 ~~~~------~~~~~~~~~~~~~~d~~~-~~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.+. ..+...++++++.+++.+ +| .+.++||+|..-.-. .......++.+...|+|||++++-+.
T Consensus 142 ~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 142 EVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred HHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 2111 223323689999999865 33 345679999987632 23456678999999999999999664
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.75 E-value=0.071 Score=45.79 Aligned_cols=125 Identities=11% Similarity=0.056 Sum_probs=76.0
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC-CCCcccEEEEccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV-SDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~ 203 (300)
...+++|+.||.|.+...+.......+.++|+++.+++..+.+... .. .+|+.++.. .-..+|+|+...-
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~-------~~--~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE-------KP--EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC-------CC--BSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC-------CC--cCCHHHcCHhhCCCCCEEEECCC
Confidence 3578999999999999988765444588999999999988887631 11 567766531 1135899997533
Q ss_pred ccCc---------ccHH-HH---HHHHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHH
Q 022248 204 LCSV---------KDVD-MT---LQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNIS 270 (300)
Q Consensus 204 l~~~---------~~~~-~~---l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
...+ .|.. .+ +-++.+.++|. +++.+.+..-... . .....+.+.+.|+
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~--~~~~ENV~gl~~~----------~-------~~~~~~~i~~~l~ 141 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPK--VVFMENVKNFASH----------D-------NGNTLEVVKNTMN 141 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCS--EEEEEEEGGGGTG----------G-------GGHHHHHHHHHHH
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHHHHhccCc--EEEEeCcHHHHhc----------c-------ccHHHHHHHHHHH
Confidence 2222 2222 12 33344445785 5666655432110 0 0011236778888
Q ss_pred hcCCcEE
Q 022248 271 EAGFSSV 277 (300)
Q Consensus 271 ~aGf~~v 277 (300)
+.||.+.
T Consensus 142 ~~GY~v~ 148 (327)
T 2c7p_A 142 ELDYSFH 148 (327)
T ss_dssp HTTBCCE
T ss_pred hCCCEEE
Confidence 8998743
No 312
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.52 E-value=0.024 Score=48.94 Aligned_cols=124 Identities=16% Similarity=0.160 Sum_probs=78.2
Q ss_pred CeEEEECCCCChhHHHhHhCCC--ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC---CCCCcccEEEEc
Q 022248 127 KKVLEIGIGTGPNLKYYAADTD--VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---VSDASVDAVVGT 201 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~~~~--~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~ 201 (300)
.+++|+-||.|.+...+..... ..+.++|+++.+.+..+.+. +...++.+|+.++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF-------PETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-------TTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC-------CCCceeccccccCCHHHhccCCCCEEEec
Confidence 4799999999999988865322 35789999999988877764 24456778887663 222368999965
Q ss_pred ccccCc---------ccHH-HHHHHHHHcc---c-CCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHH
Q 022248 202 LVLCSV---------KDVD-MTLQEVRRVL---K-PGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGN 267 (300)
Q Consensus 202 ~~l~~~---------~~~~-~~l~~~~~~L---k-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
.-...+ .|.. .++.++.+++ + | .+++.+++..-... ...+.+.+
T Consensus 77 pPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl~~~--------------------~~~~~i~~ 134 (333)
T 4h0n_A 77 PPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGFENS--------------------TVRNLFID 134 (333)
T ss_dssp CCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTGGGS--------------------HHHHHHHH
T ss_pred CCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhhhhh--------------------hHHHHHHH
Confidence 443332 2222 2344444444 4 5 56777766542110 01236778
Q ss_pred HHHhcCCcEEEE
Q 022248 268 NISEAGFSSVEL 279 (300)
Q Consensus 268 ~l~~aGf~~v~~ 279 (300)
.|++.||.+...
T Consensus 135 ~l~~~GY~v~~~ 146 (333)
T 4h0n_A 135 KLKECNFIYQEF 146 (333)
T ss_dssp HHHHTTEEEEEE
T ss_pred HHHhCCCeEEEE
Confidence 888999985433
No 313
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.36 E-value=0.0026 Score=53.12 Aligned_cols=102 Identities=5% Similarity=-0.085 Sum_probs=74.1
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CC---CCCCcccEEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IP---VSDASVDAVVG 200 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~---~~~~~~D~v~~ 200 (300)
.+..+||+=+|+|.++..+++ .+.+++.+|.++..++..+++++. .+++.++..|... +. -+...||+|++
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 456799999999999999887 457999999999999998888754 2579999999644 21 23457999998
Q ss_pred cccccCcccHHHHHHHHHH--cccCCcEEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRR--VLKPGGIYLFVE 231 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~--~LkpgG~l~~~~ 231 (300)
.=-...-.+...+++.+.+ .+.|+|++++=-
T Consensus 166 DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 166 DPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp CCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 5322222345555655555 356899888843
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.18 E-value=0.011 Score=51.71 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=64.8
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc----C-CCCCCccc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA----I-PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~----~-~~~~~~~D 196 (300)
.++.+||-+|+|. |.++..+++..+. +|+++|.++..++.+++. |.. .++...-.+ + ....+.+|
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~----~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT----HVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS----EEEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC----EEecCCccCHHHHHHHhcCCCCc
Confidence 5678999999875 7788888876666 699999999988887653 321 122211111 1 11123799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+..... ...++...+.|+++|+++++...
T Consensus 261 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 261 FALESTGS------PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp EEEECSCC------HHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEeCCC
Confidence 99864321 24578899999999999987643
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.08 E-value=0.011 Score=51.36 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=65.5
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+||-+|+|. |.++..+++..+.+++++|.++..++.+++ .|.. .+ + .+.+.+ . +.+|+|+-..
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~--~v--~-~~~~~~--~-~~~D~vid~~ 242 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK--HF--Y-TDPKQC--K-EELDFIISTI 242 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS--EE--E-SSGGGC--C-SCEEEEEECC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC--ee--c-CCHHHH--h-cCCCEEEECC
Confidence 5788999999864 777788887778899999999988877754 3431 22 2 333322 2 2799999644
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.-.. .+....+.|+|+|+++++....
T Consensus 243 g~~~------~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 243 PTHY------DLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp CSCC------CHHHHHTTEEEEEEEEECCCCC
T ss_pred CcHH------HHHHHHHHHhcCCEEEEECCCC
Confidence 3321 2578889999999999986543
No 316
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.00 E-value=0.0063 Score=53.94 Aligned_cols=101 Identities=19% Similarity=0.136 Sum_probs=65.8
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC------C-CCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI------P-VSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~------~-~~~~~ 194 (300)
.++.+||-+|+|. |.++..+++..+. +|+++|.++..++.+++. |. ..+...-.+. . .....
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga-----~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----GF-----ETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----TC-----EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----CC-----cEEcCCCcchHHHHHHHHhCCCC
Confidence 5788999999976 7888888876666 899999999888776542 32 2222111111 0 11236
Q ss_pred ccEEEEcccccCc--------ccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 195 VDAVVGTLVLCSV--------KDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 195 ~D~v~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+|+-.-.-... .+....+....+.|+++|+++++...
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 9999965432210 01223578899999999999887643
No 317
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.99 E-value=0.05 Score=47.74 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHHHhhc-CCCCeEEEECCCCChhHHHhHhC--------CCceEEEEcCCHHHHHHHHHHHHHcCCCCC
Q 022248 106 SYEAEVAGYKSQLFDNLR-GKAKKVLEIGIGTGPNLKYYAAD--------TDVQVLGVDPNRKMEKYAQTAAVAAGLPLT 176 (300)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~--------~~~~~~giD~s~~~~~~a~~~~~~~~~~~~ 176 (300)
.|.+.+..++......+. +.+..|+|+|.|.|.+...+++. ...+++.||+|+...+.-++.+... +
T Consensus 60 ~FGe~la~~~~~~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~----~ 135 (387)
T 1zkd_A 60 MFGELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI----R 135 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC----S
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC----C
Confidence 455556666666555544 33457999999999998887651 2358999999998877655554322 2
Q ss_pred CEEEEecccCcCCCCCCcccEEEEcccccCcc
Q 022248 177 NFKFLQAVGEAIPVSDASVDAVVGTLVLCSVK 208 (300)
Q Consensus 177 ~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 208 (300)
++.|.. +++++|. + .=+|+++.++..+|
T Consensus 136 ~v~W~~-~l~~lp~--~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 136 NIHWHD-SFEDVPE--G-PAVILANEYFDVLP 163 (387)
T ss_dssp SEEEES-SGGGSCC--S-SEEEEEESSGGGSC
T ss_pred CeEEeC-ChhhcCC--C-CeEEEeccccccCc
Confidence 566653 3444541 1 34666666665543
No 318
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.96 E-value=0.12 Score=44.32 Aligned_cols=123 Identities=12% Similarity=0.103 Sum_probs=75.9
Q ss_pred CeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC-CCCcccEEEEccccc
Q 022248 127 KKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV-SDASVDAVVGTLVLC 205 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~l~ 205 (300)
.+|||+-||.|.+...+.+.....+.++|+++.+.+..+.+. .-.++.+|+.++.. .-..+|+++...-..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH--------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC--------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC--------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 379999999999988886543334679999999888877763 23567888877642 123689998643322
Q ss_pred Cc---------ccHH-HHHH---HHHHcccCCcEEEEEecccCCCchHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhc
Q 022248 206 SV---------KDVD-MTLQ---EVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEA 272 (300)
Q Consensus 206 ~~---------~~~~-~~l~---~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 272 (300)
.+ .|.. .++. ++.+.++|. +++.+.+..-.. .......+.+.+.|++.
T Consensus 73 ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~gl~~-----------------~~~~~~~~~i~~~l~~~ 133 (331)
T 3ubt_Y 73 SWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKGMMA-----------------QRHNKAVQEFIQEFDNA 133 (331)
T ss_dssp GTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCGGGG-----------------CTTSHHHHHHHHHHHHH
T ss_pred CcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeeccccc-----------------ccccchhhhhhhhhccC
Confidence 22 2332 3333 444455885 566666543210 00011123677788888
Q ss_pred CCcE
Q 022248 273 GFSS 276 (300)
Q Consensus 273 Gf~~ 276 (300)
||.+
T Consensus 134 GY~v 137 (331)
T 3ubt_Y 134 GYDV 137 (331)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 9874
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.89 E-value=0.029 Score=48.70 Aligned_cols=96 Identities=21% Similarity=0.176 Sum_probs=64.8
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~ 195 (300)
.++.+||-+|+|. |.++..+++..+. +|+++|.++..++.+++. |.. .++..+-.++ . .....+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT----DIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC----EEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc----eEEcCCCcCHHHHHHHHcCCCCC
Confidence 5788999999864 7778888887777 899999999888777654 321 2222111111 0 123469
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+-...-. ..+....+.|+|+|+++++...
T Consensus 237 D~v~d~~g~~------~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 237 DKVVIAGGDV------HTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp EEEEECSSCT------THHHHHHHHEEEEEEEEECCCC
T ss_pred CEEEECCCCh------HHHHHHHHHHhcCCEEEEeccc
Confidence 9999643221 2468889999999999987643
No 320
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.79 E-value=0.017 Score=51.11 Aligned_cols=100 Identities=18% Similarity=0.150 Sum_probs=66.6
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-----CC--CCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-----IP--VSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-----~~--~~~~~ 194 (300)
.++.+||-+|+|. |.++.++++..+. .++++|.++..++.+++. |. +.+...-.+ +. .....
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----Ga-----~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GF-----EIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC-----EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----CC-----cEEccCCcchHHHHHHHHhCCCC
Confidence 5778999999865 7788888876676 799999999888877642 32 222211111 10 11246
Q ss_pred ccEEEEccccc---------CcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 195 VDAVVGTLVLC---------SVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 195 ~D~v~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+|+|+-.-.-. +.++....++...+.|++||+++++..
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 99999654322 223344568899999999999988764
No 321
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.77 E-value=0.84 Score=43.37 Aligned_cols=167 Identities=13% Similarity=0.146 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhh-cCCCCeEEEECCCCChhHHHhHhC-C--------CceEEEEcCCHHHHHHHHHHHHHcC--------
Q 022248 111 VAGYKSQLFDNL-RGKAKKVLEIGIGTGPNLKYYAAD-T--------DVQVLGVDPNRKMEKYAQTAAVAAG-------- 172 (300)
Q Consensus 111 ~~~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~-~--------~~~~~giD~s~~~~~~a~~~~~~~~-------- 172 (300)
+...+.++++.. ..+...|+-+|||-=.....|... . +..++=||..+ +++.=++.++...
T Consensus 92 ~d~~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~-v~~~K~~~l~~~~~l~~~~~~ 170 (695)
T 2zwa_A 92 IRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSD-LLKIKIELIKTIPELSKIIGL 170 (695)
T ss_dssp HHHHHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHH-HHHHHHHHHHHCHHHHHHTTC
T ss_pred HHHHHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHH-HHHHHHHHHHcChHHHHhhcc
Confidence 445555555554 234578999999998888777543 2 45667777643 3333333343211
Q ss_pred -----CC---------CCCEEEEecccCcCC----------C-CCCcccEEEEcccccCccc--HHHHHHHHHHcccCCc
Q 022248 173 -----LP---------LTNFKFLQAVGEAIP----------V-SDASVDAVVGTLVLCSVKD--VDMTLQEVRRVLKPGG 225 (300)
Q Consensus 173 -----~~---------~~~~~~~~~d~~~~~----------~-~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG 225 (300)
+. .++..++..|+.+.. + ....--++++-.++.+++. ..++|+.+.+ + |+|
T Consensus 171 ~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~ 248 (695)
T 2zwa_A 171 SEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENS 248 (695)
T ss_dssp CSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSE
T ss_pred ccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCc
Confidence 00 137788999987631 2 3344556777788888853 3567887775 4 688
Q ss_pred EEEEEecccCC--CchHHHHHHHhhhhhhhhh--cCCcccchHHHHHHHhcCCcEEEEe
Q 022248 226 IYLFVEHVAAK--DGTFLKFWQNVVDPLQQIV--SDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 226 ~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
.+++.+..... ...+...+.+.+....... ...+.+.++..+.|.++||+.+...
T Consensus 249 ~~~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 249 HFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp EEEEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 88887754432 2223332222222111100 1134567899999999999976655
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.70 E-value=0.013 Score=46.31 Aligned_cols=96 Identities=17% Similarity=0.218 Sum_probs=61.3
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC---cC-C-CCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE---AI-P-VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~---~~-~-~~~~~~D 196 (300)
.++.+||..|+ |.|.....++...+.+++++|.+++..+.+++ .+. ...+-..+.. .+ . .....+|
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~---~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGV---EYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCC---SEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC---CEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 46789999994 55666666666567799999999887766543 232 1111111110 00 0 1224699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+.... ...++.+.+.|+|+|+++++...
T Consensus 110 ~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 110 VVLNSLA-------GEAIQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEEECCC-------THHHHHHHHTEEEEEEEEECSCG
T ss_pred EEEECCc-------hHHHHHHHHHhccCCEEEEEcCC
Confidence 9996543 13578899999999999987643
No 323
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.64 E-value=0.016 Score=49.84 Aligned_cols=58 Identities=7% Similarity=-0.034 Sum_probs=46.7
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcC
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAG 172 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~ 172 (300)
++..++.....++..|||.-||+|..+.+... .+.+++|+|+++...+.++++++..+
T Consensus 241 l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~-~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 241 LPEFFIRMLTEPDDLVVDIFGGSNTTGLVAER-ESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHH-cCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 44555555557889999999999998877664 57899999999999999998876544
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.63 E-value=0.03 Score=48.88 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=65.3
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCccc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~D 196 (300)
.++.+||-+|+|. |.++..+++..+.+++++|.++..++.+++. |.. .++..+..++. .....+|
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD----HGINRLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS----EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC----EEEcCCcccHHHHHHHHhCCCCce
Confidence 5788999999864 7777788877788999999999888877653 321 12222211110 1234799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+|+....-. .+....+.|+|+|+++++....
T Consensus 260 ~vid~~g~~-------~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 260 HILEIAGGA-------GLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp EEEEETTSS-------CHHHHHHHEEEEEEEEEECCCS
T ss_pred EEEECCChH-------HHHHHHHHhhcCCEEEEEecCC
Confidence 999654421 3577889999999999986543
No 325
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.63 E-value=0.016 Score=50.06 Aligned_cols=96 Identities=19% Similarity=0.165 Sum_probs=64.5
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
.++.+||-+|+|. |.++..+++..+.+++++|.++..++.+++ .|.. .++...-.++. -..+.+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~----~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE----VAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC----EEEeCCCcCHHHHHHHhCCCCCEE
Confidence 5778999999864 788888888778899999999988887755 3321 11211111110 011368888
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+.... ....++...+.|+|+|++++....
T Consensus 237 id~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 237 LVTAV------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp EESSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEeCC------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 85432 134578889999999999987643
No 326
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.43 E-value=0.12 Score=45.74 Aligned_cols=97 Identities=11% Similarity=0.148 Sum_probs=60.5
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~ 195 (300)
.++.+||=+|+|. |.++..+++..+. +++++|.++.-++.+++. |.. .++..+-.++ . .....+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD----HVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS----EEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC----EEEcCCCCCHHHHHHHHhCCCCC
Confidence 5678999999853 6677777776677 899999999888887654 321 1222111111 0 123469
Q ss_pred cEEEEcccccCcccHHHHHHHHH----HcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVR----RVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~----~~LkpgG~l~~~~~~ 233 (300)
|+|+-.- ......+..+. +.++++|+++++...
T Consensus 284 D~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 284 KLFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp SEEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CEEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 9999533 22222334444 444999999997643
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.40 E-value=0.027 Score=49.25 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-C-CCCCCcccEEEE
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-I-PVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~D~v~~ 200 (300)
.++.+||-+|+|. |.++..+++..+.+++++|.++..++.+++. |.. . ++...-.+ . ... +.+|+|+.
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~--~--vi~~~~~~~~~~~~-~g~Dvvid 263 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD--E--VVNSRNADEMAAHL-KSFDFILN 263 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS--E--EEETTCHHHHHTTT-TCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc--E--EeccccHHHHHHhh-cCCCEEEE
Confidence 5788999999874 7777788876788999999999888877652 321 1 12111001 0 111 57999996
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
...-.. .++...+.|+++|+++.+..
T Consensus 264 ~~g~~~------~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 264 TVAAPH------NLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp CCSSCC------CHHHHHTTEEEEEEEEECCC
T ss_pred CCCCHH------HHHHHHHHhccCCEEEEecc
Confidence 543321 25778899999999998764
No 328
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.38 E-value=0.023 Score=48.75 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=44.9
Q ss_pred HHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhCCCceEEEEcCCH---HHHHHHHHHHHHcC
Q 022248 113 GYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNR---KMEKYAQTAAVAAG 172 (300)
Q Consensus 113 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~---~~~~~a~~~~~~~~ 172 (300)
.++..++.....++..|||.-||+|..+.+... .+.+++|+|+++ ..++.++++++..+
T Consensus 230 ~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~-~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALSHPGSTVLDFFAGSGVTARVAIQ-EGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHH-HTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHH-cCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 344455555556889999999999998877764 577999999999 99999999876543
No 329
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.25 E-value=0.018 Score=49.16 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=59.5
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
.++.+||=+|+| .|.++.++++..+.+++++| ++...+.+++. |. -.++ .|.+.+ .+.+|+|+-.-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga----~~v~-~d~~~v---~~g~Dvv~d~~ 207 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GV----RHLY-REPSQV---TQKYFAIFDAV 207 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TE----EEEE-SSGGGC---CSCEEEEECC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CC----CEEE-cCHHHh---CCCccEEEECC
Confidence 578899999985 47788888876777999999 88888777653 22 1222 233333 56799998533
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.-. .+....+.|+++|+++.+.
T Consensus 208 g~~-------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 208 NSQ-------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------TTGGGEEEEEEEEEEC
T ss_pred Cch-------hHHHHHHHhcCCCEEEEEe
Confidence 211 1356788999999999874
No 330
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.23 E-value=0.03 Score=48.71 Aligned_cols=95 Identities=19% Similarity=0.142 Sum_probs=63.4
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc------c-CcC-CCCCC
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV------G-EAI-PVSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d------~-~~~-~~~~~ 193 (300)
.++.+||-+|+|. |.++..+++..+. +++++|.++..++.+++ .|.. .++..+ . +.+ ....+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD----LVLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS----EEEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC----EEEcCcccccchHHHHHHHHhCC
Confidence 5778999999874 7778888876677 89999999988777654 3321 122211 0 011 00014
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.+|+|+-.-.- ...+....+.|+|+|+++++..
T Consensus 242 g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 242 KPEVTIECTGA------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCSEEEECSCC------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEec
Confidence 69999864321 2346888899999999998764
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.14 E-value=0.015 Score=50.92 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=65.0
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C---CCCC
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P---VSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~---~~~~ 193 (300)
.++.+||-+|+|. |.++..+++..+. +++++|.++...+.+++. |.. ..+...-.++ . ...+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~----~vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT----ATVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS----EEECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC----EEECCCCcCHHHHHHhhhhccCC
Confidence 5778999999864 6777778776776 899999999888777653 321 1121111110 1 2234
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
.+|+|+-... ....+....+.|++||+++++....
T Consensus 253 g~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 253 GVDVVIECAG------VAETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp CEEEEEECSC------CHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred CCCEEEECCC------CHHHHHHHHHHhccCCEEEEEeccC
Confidence 7999996432 1235788999999999999976543
No 332
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.13 E-value=0.17 Score=44.96 Aligned_cols=64 Identities=19% Similarity=0.159 Sum_probs=47.6
Q ss_pred HhHHHHHHHHHHHHHHhhcCCCCeEEEECCCCChhHHHhHhC------CCceEEEEcCCHHHHHHHHHHHHH
Q 022248 105 KSYEAEVAGYKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAAD------TDVQVLGVDPNRKMEKYAQTAAVA 170 (300)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~~~~giD~s~~~~~~a~~~~~~ 170 (300)
..|.+.+..++.++.+... ...|+|+|.|+|.+...+++. ...+++.||+|+...+.-++++..
T Consensus 119 ~~FGe~la~~~~~~~~~~g--~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 119 PLFAQTLARPVAQALDASG--TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHT--CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC--CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3455556666666665543 579999999999988888651 134899999999988888877764
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.10 E-value=0.13 Score=44.61 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=65.7
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCce-EEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec-----ccC-cC--CCCCC
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQ-VLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA-----VGE-AI--PVSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-----d~~-~~--~~~~~ 193 (300)
.++.+||=+|+|. |.++.++++..+.+ ++++|.++..++.+++. . . ..+.+... ++. .+ -....
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-~----~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-P----EVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-T----TCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-h----hcccccccccchHHHHHHHHHHhCCC
Confidence 5778899999864 77778888767776 99999999998888765 1 1 12222211 110 01 01235
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.+|+|+-...- ...+....+.|++||+++++...
T Consensus 252 g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 252 EPAVALECTGV------ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CCSEEEECSCC------HHHHHHHHHHSCTTCEEEECCCC
T ss_pred CCCEEEECCCC------hHHHHHHHHHhcCCCEEEEEccC
Confidence 79999964321 23568889999999999997643
No 334
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.05 E-value=0.24 Score=44.86 Aligned_cols=74 Identities=9% Similarity=0.059 Sum_probs=49.7
Q ss_pred CCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC---------------
Q 022248 126 AKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV--------------- 190 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--------------- 190 (300)
..+++|+-||.|.+...+.......+.++|+++.+.+..+.+.... +...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~----p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD----PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC----TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC----CCcceeccchhhhhhccccccchhhHHhhh
Confidence 4689999999999998886543334889999998887776654110 234456677755421
Q ss_pred --CCCcccEEEEccc
Q 022248 191 --SDASVDAVVGTLV 203 (300)
Q Consensus 191 --~~~~~D~v~~~~~ 203 (300)
.-..+|+|+...-
T Consensus 164 ~~~~~~~Dvl~gGpP 178 (482)
T 3me5_A 164 RQHIPEHDVLLAGFP 178 (482)
T ss_dssp HHHSCCCSEEEEECC
T ss_pred hhcCCCCCEEEecCC
Confidence 1136899986543
No 335
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.91 E-value=0.097 Score=45.31 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc-CcC----C--CC---C
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG-EAI----P--VS---D 192 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~-~~~----~--~~---~ 192 (300)
.++.+||-+|+|. |.++..+++..+.+|+++|.++..++.+++ .+.. .++..+- .+. . .. .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~----~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD----VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS----EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC----EEEcCcccccHHHHHHHHhccccC
Confidence 4778999999864 677777777677789999999988877754 3331 1121110 111 0 11 2
Q ss_pred CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 193 ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
..+|+|+....- ...++...+.|+++|+++++..
T Consensus 239 ~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 239 DLPNVTIDCSGN------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCSEEEECSCC------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 469999864321 2346888899999999998764
No 336
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.89 E-value=0.048 Score=47.09 Aligned_cols=94 Identities=13% Similarity=0.181 Sum_probs=63.3
Q ss_pred CCCeEEEECCCC-ChhHHHhHhCC--CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec----cc-CcCCCCCCccc
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAADT--DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA----VG-EAIPVSDASVD 196 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~~~--~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----d~-~~~~~~~~~~D 196 (300)
++.+||-+|+|. |.++.++++.. +.+++++|.++..++.+++. |.. .++.. +. ..+. ....+|
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~~~~-~g~g~D 240 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD----YVSEMKDAESLINKLT-DGLGAS 240 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS----EEECHHHHHHHHHHHH-TTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC----EEeccccchHHHHHhh-cCCCcc
Confidence 678999999863 66777777755 78999999999888877653 321 11211 11 1111 123799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+..-.- ...++...+.|+|+|+++.+...
T Consensus 241 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 241 IAIDLVGT------EETTYNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC------hHHHHHHHHHhhcCCEEEEeCCC
Confidence 99965332 23578889999999999987643
No 337
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.79 E-value=0.079 Score=47.03 Aligned_cols=61 Identities=13% Similarity=0.155 Sum_probs=47.6
Q ss_pred CCCCeEEEECCCCChhHHHhH-h-CC-CceEEEEcCCHHHHHHHHHHHHH--c-CCCCCCEEEEeccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYA-A-DT-DVQVLGVDPNRKMEKYAQTAAVA--A-GLPLTNFKFLQAVG 185 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~-~-~~-~~~~~giD~s~~~~~~a~~~~~~--~-~~~~~~~~~~~~d~ 185 (300)
.++..++|||++.|.++..++ + .+ ..+|+++|+++...+..+++++. + +.. +++.++...+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~-~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFA-SRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTG-GGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCC-CCEEEEEeEE
Confidence 467899999999999998877 3 23 36999999999999999999887 2 221 3677765544
No 338
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.78 E-value=0.071 Score=50.73 Aligned_cols=127 Identities=17% Similarity=0.224 Sum_probs=78.0
Q ss_pred CCCeEEEECCCCChhHHHhHhC--------C-----CceEEEEcC---CHHHHHHHH-----------HHHHHcCC----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD--------T-----DVQVLGVDP---NRKMEKYAQ-----------TAAVAAGL---- 173 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~--------~-----~~~~~giD~---s~~~~~~a~-----------~~~~~~~~---- 173 (300)
+..+|+|+|.|+|.....+.+. + ..+++.+|. +...+..+- +.+.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4579999999999876665431 1 157899998 555544322 11221110
Q ss_pred ------CC--CCEEEEecccCc-CC-CC---CCcccEEEEcc-cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCC
Q 022248 174 ------PL--TNFKFLQAVGEA-IP-VS---DASVDAVVGTL-VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKD 237 (300)
Q Consensus 174 ------~~--~~~~~~~~d~~~-~~-~~---~~~~D~v~~~~-~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~ 237 (300)
.. -.++++.+|+.+ ++ +. ++.+|+++... ....-+++ ..++..+.++++|||.+.... .
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~--~--- 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT--A--- 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC--C---
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc--C---
Confidence 00 145667777744 22 21 46899998743 11211222 578899999999999876532 1
Q ss_pred chHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 238 GTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
...+++.|.++||.+....
T Consensus 213 ------------------------~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 213 ------------------------AGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp ------------------------CHHHHHHHHHTTCEEEEEE
T ss_pred ------------------------cHHHHHHHHhCCeEEEecc
Confidence 1267788999999977655
No 339
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.77 E-value=0.058 Score=46.29 Aligned_cols=95 Identities=16% Similarity=0.119 Sum_probs=62.5
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 196 (300)
.++.+||-.|+ |.|..+..++...+.+++++|.++..++.+++ .+. ...+-..+.+++ ....+.+|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~---~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGF---DAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCC---cEEEecCCHHHHHHHHHHHhCCCCe
Confidence 46789999997 56777777776677899999999887777633 232 111111110111 01125799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+|+..... ..+....+.|++||+++++..
T Consensus 217 ~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 217 CYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 99875432 246888899999999998764
No 340
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.76 E-value=0.04 Score=47.54 Aligned_cols=95 Identities=15% Similarity=0.208 Sum_probs=62.4
Q ss_pred CCCCeEEEECCC--CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcc
Q 022248 124 GKAKKVLEIGIG--TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 195 (300)
.++.+||-+|+| .|.++..+++..+++++++|.++..++.+++. +. .. .+...-.++. .....+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga---~~-~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GA---AY-VIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TC---SE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CC---cE-EEeCCcccHHHHHHHHhCCCCC
Confidence 578899999986 67777777776678999999999888877653 32 11 1211111110 123479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+....-. .+.+..+.|+++|+++++...
T Consensus 215 Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 215 DAAIDSIGGP-------DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp EEEEESSCHH-------HHHHHHHTEEEEEEEEECCCT
T ss_pred cEEEECCCCh-------hHHHHHHHhcCCCEEEEEeec
Confidence 9998643221 124455899999999998653
No 341
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.75 E-value=0.56 Score=40.96 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=76.6
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
.+.+||.++.+.|.++..++.. .++.+.-|-...+..+.++..+++....+++.... +.+ .+.||+|+... .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~---~~~~~~v~~~l-p 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDST-ADY---PQQPGVVLIKV-P 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT-SCC---CSSCSEEEEEC-C
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEecccc-ccc---ccCCCEEEEEc-C
Confidence 4568999999999999988743 33444335555566677888888864456665332 222 36799998743 2
Q ss_pred cCcccHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHHHh
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQNV 247 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 247 (300)
.........|..+...|+||+.+++..............+...
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~ 152 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 152 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhh
Confidence 3334556678999999999999998876554433344444433
No 342
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.71 E-value=0.052 Score=46.45 Aligned_cols=96 Identities=13% Similarity=0.095 Sum_probs=64.7
Q ss_pred CCCCeEEEEC--CCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC------CCCCCcc
Q 022248 124 GKAKKVLEIG--IGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI------PVSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 195 (300)
.++.+||-.| .|.|..+..+++..+.+++++|.++..++.+++. +. . ..+...-.++ ......+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~-~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GA---W-ETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC---S-EEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---C-EEEeCCCccHHHHHHHHhCCCCc
Confidence 5678999988 3567777787776778999999999888877653 32 1 1121111111 0123479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|+|+....- ..+....+.|+++|+++++....
T Consensus 211 Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 211 PVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp EEEEESSCG-------GGHHHHHTTEEEEEEEEECCCTT
T ss_pred eEEEECCCh-------HHHHHHHHHhcCCCEEEEEecCC
Confidence 999965432 24678889999999999986543
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.68 E-value=0.092 Score=45.37 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=62.6
Q ss_pred CCCeEEEECCC-CChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCccc
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASVD 196 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~D 196 (300)
++.+||-+|+| .|.++..+++..+. +++++|.++..++.+++. +.. .++..+-.++ . .....+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~----~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD----YVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS----EEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC----EEECCCCcCHHHHHHHHcCCCCCC
Confidence 67899999985 36677777776677 899999999887777643 321 1121111111 0 1123699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+..... ...++...+.|+++|+++.+...
T Consensus 239 ~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 239 VFLEFSGA------PKALEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp EEEECSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEEccC
Confidence 99865431 23568889999999999987643
No 344
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.62 E-value=0.46 Score=34.95 Aligned_cols=92 Identities=9% Similarity=0.030 Sum_probs=57.4
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
..+|+=+|+| .++..+++ ..+..++++|.+++.++.+++. .+.++.+|..+.. ..-..+|+|
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~---------g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER---------GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc---------CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 3578888885 45555443 4677999999999988776642 4567778875431 122478888
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++...-. .....+-...+.+.|+..++...
T Consensus 76 i~~~~~~---~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 76 ILTIPNG---YEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EECCSCH---HHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEECCCh---HHHHHHHHHHHHHCCCCeEEEEE
Confidence 8643111 11122344566678888777644
No 345
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.57 E-value=0.052 Score=46.88 Aligned_cols=93 Identities=23% Similarity=0.280 Sum_probs=62.9
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 195 (300)
.++.+||-.|+ |.|.++..+++..+.++++++.++..++.+++. +. +. ++..+ .++. .....+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga--~~--v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA--DI--VLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC--SE--EEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC--cE--EecCc-hhHHHHHHHHhCCCCc
Confidence 56889999996 567788888877788999999999888777653 32 11 22222 1110 123479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+....-. .+....+.|+++|+++++..
T Consensus 229 Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 229 DMVVDPIGGP-------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred eEEEECCchh-------HHHHHHHhhcCCCEEEEEEc
Confidence 9999654332 36788899999999998763
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.57 E-value=0.13 Score=44.35 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=64.0
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~ 195 (300)
.++.+||-+|+ |.|..+..+++..+.+++++|.++..++.+++. +.. . ++...-.++ . .....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~--~--~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD--E--TVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS--E--EEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC--E--EEcCCcccHHHHHHHHhCCCCc
Confidence 46789999998 567777777776778999999999888877542 321 1 121111111 0 122479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+.... .. .++.+.+.|+++|+++++...
T Consensus 237 d~vi~~~g-~~------~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 237 DKVVDHTG-AL------YFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp EEEEESSC-SS------SHHHHHHHEEEEEEEEESSCC
T ss_pred eEEEECCC-HH------HHHHHHHhhccCCEEEEEecC
Confidence 99997654 21 367888999999999987643
No 347
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.57 E-value=0.088 Score=49.94 Aligned_cols=127 Identities=17% Similarity=0.200 Sum_probs=77.3
Q ss_pred CCCeEEEECCCCChhHHHhHhC-------------CCceEEEEcC---CHHHHHHHHH-----------HHHHcCCCC--
Q 022248 125 KAKKVLEIGIGTGPNLKYYAAD-------------TDVQVLGVDP---NRKMEKYAQT-----------AAVAAGLPL-- 175 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~-------------~~~~~~giD~---s~~~~~~a~~-----------~~~~~~~~~-- 175 (300)
+.-+|||+|-|+|.......+. ...+++++|. +.+.+..+-. .........
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4569999999999766555331 1246899998 7777764322 222111100
Q ss_pred ----------CCEEEEecccCc-CC-CC---CCcccEEEEcc-cccCcccH--HHHHHHHHHcccCCcEEEEEecccCCC
Q 022248 176 ----------TNFKFLQAVGEA-IP-VS---DASVDAVVGTL-VLCSVKDV--DMTLQEVRRVLKPGGIYLFVEHVAAKD 237 (300)
Q Consensus 176 ----------~~~~~~~~d~~~-~~-~~---~~~~D~v~~~~-~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~ 237 (300)
..+++..+|+.+ ++ +. ...||+++... ....-+++ ..+++.+.++++|||.+.....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~----- 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS----- 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCC-----
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccC-----
Confidence 123455566643 22 11 46799998743 11111232 5789999999999998775331
Q ss_pred chHHHHHHHhhhhhhhhhcCCcccchHHHHHHHhcCCcEEEEe
Q 022248 238 GTFLKFWQNVVDPLQQIVSDGCHLTRQTGNNISEAGFSSVELG 280 (300)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 280 (300)
...+++.|.++||.+....
T Consensus 221 ------------------------~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 221 ------------------------AGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ------------------------CHHHHHHHHHHTCEEEEEE
T ss_pred ------------------------cHHHHHHHHhCCeEEEecc
Confidence 1267788889999876644
No 348
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.49 E-value=0.056 Score=46.43 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=63.6
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 195 (300)
.++.+||-+|+ |.|..+..+++..+.+++++|.++..++.+++ .+. . ..+..+-.++. .....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~-~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA---E-YLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---S-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---c-EEEeCCCchHHHHHHHHhCCCCc
Confidence 57789999984 56777778877778899999999988776654 232 1 12221111110 123469
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+....- ..+....+.|+++|+++++..
T Consensus 219 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 219 DASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred eEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 999965432 246788899999999999764
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.43 E-value=0.11 Score=45.30 Aligned_cols=96 Identities=17% Similarity=0.224 Sum_probs=63.3
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~ 194 (300)
.++.+||-+|+|. |.++..+++..+. +|+++|.++..++.+++ .|.. .++...- +++ ....+.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT----DFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC----EEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc----eEEeccccchhHHHHHHHHhCCC
Confidence 4678999999863 6777777776677 89999999988887764 2321 1221110 111 011247
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEecc
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEHV 233 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 233 (300)
+|+|+..-.. ...+....+.|+++ |+++++...
T Consensus 263 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 263 VDFSLECVGN------VGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEcCC
Confidence 9999864321 23578899999999 999987643
No 350
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.39 E-value=0.12 Score=45.14 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=62.8
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~ 194 (300)
.++.+||-+|+|. |.++.++++..+. +++++|.++..++.+++. |.. .++...- +++ ....+.
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT----ECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS----EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc----eEeccccccccHHHHHHHHhCCC
Confidence 4678999999864 6777777776666 899999999888877643 321 1221110 111 111247
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEec
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEH 232 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 232 (300)
+|+|+....- ...++...+.|+++ |+++++..
T Consensus 261 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 261 VDYSFECIGN------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCEEEECCCc------HHHHHHHHHhhccCCcEEEEEec
Confidence 9999864321 23578889999999 99998764
No 351
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.34 E-value=0.12 Score=45.07 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=62.7
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~ 194 (300)
.++.+||-+|+|. |.++..+++..+. +|+++|.++..++.+++ .|.. .++...- +++ ....+.
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT----ECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS----EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc----eEecccccchhHHHHHHHHhCCC
Confidence 4678999999864 6777777776677 89999999988877754 2321 1221110 111 111247
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEec
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEH 232 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 232 (300)
+|+|+..-.- ...+....+.|+++ |+++++..
T Consensus 262 ~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 262 VDFSFEVIGR------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp BSEEEECSCC------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred CcEEEECCCC------HHHHHHHHHHhhcCCcEEEEecc
Confidence 9999864321 23568889999999 99998764
No 352
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.33 E-value=0.11 Score=45.28 Aligned_cols=89 Identities=12% Similarity=0.146 Sum_probs=59.0
Q ss_pred CCeEEEECCC-CChhHHHhHhCCCceEEEEcCCH---HHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC------CCcc
Q 022248 126 AKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNR---KMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS------DASV 195 (300)
Q Consensus 126 ~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~ 195 (300)
+.+||-+|+| .|.++..+++..+.+++++|.++ +.++.+++. +. ..+ | .+ .+. .+.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga-----~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KT-----NYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TC-----EEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CC-----cee--c-hH-HHHHHHHHhCCCC
Confidence 7899999984 35566666665677999999987 666666542 32 222 2 11 111 1469
Q ss_pred cEEEEcccccCcccHHHHH-HHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTL-QEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l-~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+....... .+ +...+.|+++|.++++...
T Consensus 248 d~vid~~g~~~------~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 248 DVIIDATGADV------NILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp EEEEECCCCCT------HHHHHHGGGEEEEEEEEECSCC
T ss_pred CEEEECCCChH------HHHHHHHHHHhcCCEEEEEecC
Confidence 99997543321 35 7889999999999987653
No 353
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.25 E-value=0.11 Score=45.36 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=63.1
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~ 194 (300)
.++.+||-+|+|. |.++.++++..+. +|+++|.++..++.+++ .|.. .++...- +++ ....+.
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT----ECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS----EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc----EEEecccccchHHHHHHHHhCCC
Confidence 4678999999863 6777777776666 89999999988877754 3321 1221110 111 111247
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEecc
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEHV 233 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 233 (300)
+|+|+-.-.- ...+....+.|+++ |+++++...
T Consensus 262 ~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 262 VDYAVECAGR------IETMMNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECCCC
T ss_pred CCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEccC
Confidence 9999964321 23578889999999 999987643
No 354
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.08 E-value=0.051 Score=46.70 Aligned_cols=96 Identities=11% Similarity=0.117 Sum_probs=63.9
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 196 (300)
.++.+||-.|+ |.|..+..+++..+.+++++|.++..++.+.+. .+.. ..+...-.++ ....+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD----GAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS----EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC----EEEECCCHHHHHHHHHhcCCCce
Confidence 57889999998 567777777776788999999999877766322 2321 1121111111 01135799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+....- ..+....+.|+++|+++++...
T Consensus 221 ~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 221 VFFDNVGG-------EILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEESSCH-------HHHHHHHTTEEEEEEEEECCCG
T ss_pred EEEECCCc-------chHHHHHHHHhhCCEEEEEeec
Confidence 99864431 3578899999999999987643
No 355
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.04 E-value=0.072 Score=46.06 Aligned_cols=97 Identities=24% Similarity=0.357 Sum_probs=63.1
Q ss_pred CCCCeEEEECCC--CChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc---C-CCCC-Ccc
Q 022248 124 GKAKKVLEIGIG--TGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA---I-PVSD-ASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG--~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~---~-~~~~-~~~ 195 (300)
.++.+||-.|+| .|..+..+++.. +.+++++|.++..++.+++. +. ...+-..+... + .... +.+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GA---DYVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CC---CEEecCCCccHHHHHHHHhcCCCc
Confidence 577899999987 556666666655 78999999999888777542 32 11121111110 0 1112 479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+....- ...++...+.|+++|+++++...
T Consensus 242 d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 242 DAVIDLNNS------EKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp EEEEESCCC------HHHHTTGGGGEEEEEEEEECCSS
T ss_pred eEEEECCCC------HHHHHHHHHHHhcCCEEEEECCC
Confidence 999865432 23568888999999999987643
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.96 E-value=0.11 Score=45.14 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=64.4
Q ss_pred CCCCeEEEEC--CCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCccc
Q 022248 124 GKAKKVLEIG--IGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 196 (300)
.++.+||-+| .|.|..+..+++..+.+++++|.+++.++.+++ .+.. .++..+-.++ ....+.+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~----~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD----RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc----EEEecCChhHHHHHHHhcCCCCC
Confidence 4678999999 467888888887678899999999887777654 2321 1121111111 01124699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+....- ..++.+.+.|+++|+++++...
T Consensus 234 ~vid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 234 VVYESVGG-------AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp EEEECSCT-------HHHHHHHHHEEEEEEEEECCCG
T ss_pred EEEECCCH-------HHHHHHHHHHhcCCEEEEEeCC
Confidence 99965431 3578889999999999987643
No 357
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.91 E-value=0.074 Score=46.18 Aligned_cols=94 Identities=12% Similarity=0.099 Sum_probs=60.1
Q ss_pred CeEEEECCC-CChhH-HHhH-hCCCce-EEEEcCCHH---HHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCcccEE
Q 022248 127 KKVLEIGIG-TGPNL-KYYA-ADTDVQ-VLGVDPNRK---MEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVDAV 198 (300)
Q Consensus 127 ~~vLDiGcG-~G~~~-~~l~-~~~~~~-~~giD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 198 (300)
.+||-+|+| .|.++ .+++ +..+.+ |+++|.+++ .++.+++ .|.. .+.....++.++ .. .+.+|+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~--~v~~~~~~~~~i~~~-~gg~Dvv 246 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDAT--YVDSRQTPVEDVPDV-YEQMDFI 246 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTCE--EEETTTSCGGGHHHH-SCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCCc--ccCCCccCHHHHHHh-CCCCCEE
Confidence 899999974 46777 8888 767776 999999887 7777654 2321 110000111111 01 2379999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+-...- ...++...+.|+++|+++.+...
T Consensus 247 id~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 247 YEATGF------PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp EECSCC------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred EECCCC------hHHHHHHHHHHhcCCEEEEEeCC
Confidence 854321 23568889999999999987654
No 358
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.88 E-value=0.16 Score=44.31 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=62.6
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-----~~~~~~ 194 (300)
.++.+||-+|+| .|.++..+++..+. +|+++|.++..++.+++ .|.. .++...- +++ ....+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT----DCLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS----EEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc----EEEccccccchHHHHHHHHhCCC
Confidence 467899999986 36777777776677 89999999988777754 2321 1121110 111 011237
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEec
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEH 232 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 232 (300)
+|+|+-.-.- ...++...+.|+++ |+++++..
T Consensus 266 ~Dvvid~~G~------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCAGT------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccEEEECCCC------HHHHHHHHHHhhcCCCEEEEECC
Confidence 9999854321 23578899999999 99998764
No 359
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.84 E-value=0.12 Score=45.24 Aligned_cols=96 Identities=19% Similarity=0.283 Sum_probs=63.6
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc--cCcC-----CCCCCc
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV--GEAI-----PVSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d--~~~~-----~~~~~~ 194 (300)
.++.+||=+|+| .|.++..+++..+. +|+++|.++..++.+++ .|.. .++... -.++ ....+.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN----EFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC----EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc----EEEccccCchhHHHHHHHhcCCC
Confidence 567899999986 47777777776666 89999999988877654 3321 122111 1111 112347
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCC-cEEEEEecc
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPG-GIYLFVEHV 233 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 233 (300)
+|+|+-...- ...+....+.|++| |+++++...
T Consensus 264 ~D~vid~~g~------~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 264 VDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp BSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCEEEECCCC------HHHHHHHHHHhhccCCEEEEEccc
Confidence 9999964321 23578899999997 999997643
No 360
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.63 E-value=0.13 Score=44.55 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=62.3
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~ 195 (300)
.++.+||-.|+ |.|..+..++...+.+++++|.++..++.+++. +. ... +..+-.+. . .....+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~---~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GA---AAG-FNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TC---SEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC---cEE-EecCChHHHHHHHHHhcCCCc
Confidence 46789999984 567777777766778999999999888777432 32 111 11111110 0 122469
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+....-. .+....+.|+++|+++++...
T Consensus 233 d~vi~~~G~~-------~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 233 NLILDCIGGS-------YWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp EEEEESSCGG-------GHHHHHHHEEEEEEEEECCCT
T ss_pred eEEEECCCch-------HHHHHHHhccCCCEEEEEecc
Confidence 9998655432 357788999999999987643
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.62 E-value=0.13 Score=44.63 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=61.8
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC------CCCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI------PVSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 195 (300)
.++.+||-.|+ |.|..+..+++..+.+++++|.++..++.+++ .+. .. .+..+-.+. -.....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~~-~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGA---HE-VFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCC---CE-EEeCCCchHHHHHHHHcCCCCc
Confidence 46789999996 56677777777677899999999887776543 232 11 121111111 0122469
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+....- ..+....+.|+++|+++++..
T Consensus 241 D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 241 DIIIEMLAN-------VNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEEEESCHH-------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEEECCCh-------HHHHHHHHhccCCCEEEEEec
Confidence 999865431 246788899999999998764
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.61 E-value=0.11 Score=45.66 Aligned_cols=96 Identities=21% Similarity=0.145 Sum_probs=63.0
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc---cCc----C-C-CCC
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV---GEA----I-P-VSD 192 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d---~~~----~-~-~~~ 192 (300)
.++.+||-+|+| .|.++..+++..+ .+++++|.+++.++.+++ .|.. .++..+ -.+ + . ...
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~----~vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD----LTLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS----EEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc----EEEeccccCcchHHHHHHHHhCC
Confidence 467899999965 4677777777677 599999999988877764 3321 122211 001 1 0 122
Q ss_pred CcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 193 ASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 193 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
..+|+|+-...-. ..+....+.|+++|+++.+...
T Consensus 266 ~g~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 266 RGADFILEATGDS------RALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp SCEEEEEECSSCT------THHHHHHHHEEEEEEEEECCCC
T ss_pred CCCcEEEECCCCH------HHHHHHHHHHhcCCEEEEEecC
Confidence 3699999654321 2467888999999999987643
No 363
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.57 E-value=0.13 Score=44.20 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=63.1
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 196 (300)
.++.+||-.|+ |.|..+..+++..+.+++++|.++..++.+++. .+. ...+-..+..++ ....+.+|
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~---~~~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGF---DDAFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCC---SEEEETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCC---ceEEecCCHHHHHHHHHHHhCCCCc
Confidence 46789999997 567777777776778999999998877766532 232 111111111111 01125699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+|+..... ..+....+.|+++|+++++..
T Consensus 228 ~vi~~~g~-------~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 228 IYFENVGG-------KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCH-------HHHHHHHHHHhcCCEEEEEcc
Confidence 99865431 257889999999999998764
No 364
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.57 E-value=0.06 Score=46.85 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=61.7
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC-cC--CCCCCcccEEE
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE-AI--PVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~~~D~v~ 199 (300)
.++.+||-+|+| .|.++..+++..+.+++++|.++..++.+++. |.. . ++...-. +. ... +.+|+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~--v~~~~~~~~~~~~~~-~~~D~vi 248 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD--H--YIATLEEGDWGEKYF-DTFDLIV 248 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS--E--EEEGGGTSCHHHHSC-SCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC--E--EEcCcCchHHHHHhh-cCCCEEE
Confidence 578899999985 36777777776677899999998888777652 321 1 1211111 11 111 4799999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
....-.. ...++...+.|+++|+++.+..
T Consensus 249 d~~g~~~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSLT----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCST----TCCTTTGGGGEEEEEEEEECCC
T ss_pred ECCCCCc----HHHHHHHHHHhcCCCEEEEecC
Confidence 6543300 0124667889999999988653
No 365
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.56 E-value=0.11 Score=44.33 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=62.4
Q ss_pred CCCCeEEEEC--CCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC---cC-C-CCCCccc
Q 022248 124 GKAKKVLEIG--IGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE---AI-P-VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~---~~-~-~~~~~~D 196 (300)
.++.+||-.| +|.|.....+++..+.+++++|.++..++.+++. +. ...+-..+.. .+ . .....+|
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GA---WQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC---CEEEECCCccHHHHHHHHhCCCCce
Confidence 4678999998 4567777777765677999999998887777652 32 1111111110 00 0 1234699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+|+.... ...++.+.+.|+++|+++++..
T Consensus 212 ~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 212 VVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 9997654 1246888999999999998764
No 366
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.51 E-value=0.17 Score=43.99 Aligned_cols=93 Identities=17% Similarity=0.315 Sum_probs=62.7
Q ss_pred CCCeEEEEC-C-CCChhHHHhHhC-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEec--ccC-cC-CCCCCcccE
Q 022248 125 KAKKVLEIG-I-GTGPNLKYYAAD-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQA--VGE-AI-PVSDASVDA 197 (300)
Q Consensus 125 ~~~~vLDiG-c-G~G~~~~~l~~~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--d~~-~~-~~~~~~~D~ 197 (300)
++.+||=+| + |.|.++..+++. .+.+|+++|.++..++.+++ .|.. . ++.. +.. .+ ....+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad--~--vi~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH--H--VIDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS--E--EECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC--E--EEeCCCCHHHHHHHhcCCCceE
Confidence 567899988 4 468888888875 68899999999988777754 3321 1 1211 110 00 123457999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|+... .-...+..+.+.|+++|+++++.
T Consensus 243 vid~~------g~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 243 VFSTT------HTDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEECS------CHHHHHHHHHHHSCTTCEEEECS
T ss_pred EEECC------CchhhHHHHHHHhcCCCEEEEEC
Confidence 98642 22345788999999999999874
No 367
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.41 E-value=0.22 Score=42.83 Aligned_cols=93 Identities=23% Similarity=0.210 Sum_probs=62.2
Q ss_pred CCCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCC------CCccc
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVS------DASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~D 196 (300)
.++.+||-+|+| .|.++..+++..+.+++++|.++..++.+++ .+.. .++ |..+..+. .+.+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~----~~~--d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD----LVV--NPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS----EEE--CTTTSCHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC----EEe--cCCCccHHHHHHHHhCCCC
Confidence 467899999985 4667777777677899999999988877754 2321 111 21111100 04699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+|+..... ...++...+.|+++|+++++..
T Consensus 233 ~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 233 AAVVTAVS------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCC------HHHHHHHHHHhhcCCEEEEecc
Confidence 99864421 2356888899999999998764
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.32 E-value=0.15 Score=44.20 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=63.6
Q ss_pred CCCCeEEEEC--CCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CCCCccc
Q 022248 124 GKAKKVLEIG--IGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D 196 (300)
.++.+||-+| .|.|..+..+++..+.+++++|.++..++.+++. +.. ..+..+-.++. ...+.+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~----~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK----RGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS----EEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC----EEEeCCchHHHHHHHHHhCCCce
Confidence 5678999885 3467777788777788999999999888877653 321 11211111110 0135799
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+....-. .+....+.|+++|+++++...
T Consensus 238 vvid~~g~~-------~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 238 IILDMIGAA-------YFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp EEEESCCGG-------GHHHHHHTEEEEEEEEECCCT
T ss_pred EEEECCCHH-------HHHHHHHHhccCCEEEEEEec
Confidence 999754322 467788999999999987643
No 369
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.30 E-value=0.2 Score=42.95 Aligned_cols=95 Identities=20% Similarity=0.241 Sum_probs=62.8
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----C-CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----P-VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~~ 195 (300)
.++.+||-.|+ |.|..+..++...+.+++++|.+++.++.+++. +. ... +..+-.+. . .....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~---~~~-~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GC---HHT-INYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TC---SEE-EETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---CEE-EECCCHHHHHHHHHHhCCCCC
Confidence 46789999995 667777777766778999999999877777542 32 111 11111110 0 112469
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
|+|+....- ..++...+.|+++|+++.+...
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 216 DVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp EEEEECSCT-------TTHHHHHHTEEEEEEEEECCCT
T ss_pred eEEEECCcH-------HHHHHHHHhhccCCEEEEEecC
Confidence 999965432 2468888999999999987643
No 370
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.24 E-value=0.13 Score=44.49 Aligned_cols=97 Identities=20% Similarity=0.230 Sum_probs=63.0
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D 196 (300)
.++.+||-+|+ |.|..+..+++..+.+++++|.++..++.+++ .+. ...+-..+.+++. ..++.+|
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~---~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGG---EVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTC---CEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCC---ceEEecCccHhHHHHHHHHhCCCCC
Confidence 56789999998 56777777776667899999998877766554 232 1111111111110 1112699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
+|+..... ...++.+.+.|+++|+++++...
T Consensus 241 ~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 241 GVINVSVS------EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp EEEECSSC------HHHHHHHTTSEEEEEEEEECCCC
T ss_pred EEEECCCc------HHHHHHHHHHHhcCCEEEEEeCC
Confidence 99875432 23578899999999999987643
No 371
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.16 E-value=1.7 Score=31.56 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=54.2
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
..+|+=+|+| .++..+++ ..+.+++++|.++..++.+++. .+.++.+|..+.. ..-..+|+|
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~---------~~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE---------GFDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT---------TCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC---------CCcEEECCCCCHHHHHhCCcccCCEE
Confidence 4578889984 46666554 3577999999999877766542 3567777775431 123468988
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+.... . ......+....+.+. ...++...
T Consensus 75 i~~~~--~-~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 75 LITGS--D-DEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EECCS--C-HHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEecC--C-HHHHHHHHHHHHHhC-CceEEEEE
Confidence 86442 1 111223334444455 55555533
No 372
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.98 E-value=0.16 Score=42.87 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=51.5
Q ss_pred CCCCeEEEECCCCChhHHHhHhCCCce---EEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC---C-CCccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADTDVQ---VLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV---S-DASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~~~~---~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~---~-~~~~D 196 (300)
....+++|+-||.|.+...+... +.+ +.++|+++.+.+..+.+. +...++.+|+.++.. + .+.+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-------~~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-------QGKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-------TTCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-------CCCceeCCChHHccHHHhcccCCcC
Confidence 45678999999999999888653 433 589999999888776653 244577888877631 1 14699
Q ss_pred EEEEc
Q 022248 197 AVVGT 201 (300)
Q Consensus 197 ~v~~~ 201 (300)
+++..
T Consensus 86 ll~gg 90 (295)
T 2qrv_A 86 LVIGG 90 (295)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99964
No 373
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.77 E-value=0.048 Score=46.16 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=61.3
Q ss_pred cCCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc-CcCCCCCCcccEEE
Q 022248 123 RGKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG-EAIPVSDASVDAVV 199 (300)
Q Consensus 123 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~v~ 199 (300)
..++.+||-+|+ |.|..+..+++..+.+++++|.++..++.+++ .+.. .+ +..+- .++.-.-+.+|+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~--~~--~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE--EA--ATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS--EE--EEGGGHHHHHHHTTSEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC--EE--EECCcchhHHHHhcCceEEE
Confidence 357889999997 56778888887677899999998887777654 2321 11 21110 11100005699999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
. ..- ..++...+.|+++|+++.+..
T Consensus 195 d-~g~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 195 E-VRG-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp E-CSC-------TTHHHHHTTEEEEEEEEEC--
T ss_pred E-CCH-------HHHHHHHHhhccCCEEEEEeC
Confidence 7 432 146888999999999988653
No 374
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.69 E-value=0.11 Score=45.22 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=59.8
Q ss_pred CCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
++.+||-+|+| .|.++..+++..+.+++++|.+++.++.+++ ..|.. .+ +-..+.+.+.-..+.+|+|+-.-.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~--~v-i~~~~~~~~~~~~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD--DY-VIGSDQAKMSELADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS--CE-EETTCHHHHHHSTTTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc--ee-eccccHHHHHHhcCCCCEEEECCC
Confidence 67899999875 4566677776667799999998876666552 22321 22 111111111001136999996543
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
-.. .++...+.|+++|+++.+...
T Consensus 254 ~~~------~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T 2cf5_A 254 VHH------ALEPYLSLLKLDGKLILMGVI 277 (357)
T ss_dssp SCC------CSHHHHTTEEEEEEEEECSCC
T ss_pred ChH------HHHHHHHHhccCCEEEEeCCC
Confidence 221 146778899999999987643
No 375
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.65 E-value=0.12 Score=44.46 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=64.2
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccC---cC-C-CCCCccc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGE---AI-P-VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~---~~-~-~~~~~~D 196 (300)
.++.+||-+|+|. |.++.++++.. +.+++++|.++..++.+++ .|.. . ++..+-. .+ . .....+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~--~--~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD--A--AVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS--E--EEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC--E--EEcCCCcHHHHHHHHhCCCCCe
Confidence 5788999999864 77777777643 7899999999988887765 3331 1 2211110 00 0 0123699
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
+|+-.-.- ...++...+.|+++|+++++....
T Consensus 242 ~v~d~~G~------~~~~~~~~~~l~~~G~iv~~G~~~ 273 (345)
T 3jv7_A 242 AVFDFVGA------QSTIDTAQQVVAVDGHISVVGIHA 273 (345)
T ss_dssp EEEESSCC------HHHHHHHHHHEEEEEEEEECSCCT
T ss_pred EEEECCCC------HHHHHHHHHHHhcCCEEEEECCCC
Confidence 99864321 235788999999999999986543
No 376
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.57 E-value=0.074 Score=44.98 Aligned_cols=56 Identities=25% Similarity=0.335 Sum_probs=39.2
Q ss_pred CCEEEEecccCc-CC-CCCCcccEEEEccccc----C----------------cccHHHHHHHHHHcccCCcEEEEEe
Q 022248 176 TNFKFLQAVGEA-IP-VSDASVDAVVGTLVLC----S----------------VKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 176 ~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~l~----~----------------~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.++.++++|..+ +. +++++||+|+++=-.. + +.....++.++.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 467899999876 32 5678999999852111 0 0112456789999999999998865
No 377
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.49 E-value=2.7 Score=41.46 Aligned_cols=71 Identities=7% Similarity=0.044 Sum_probs=49.1
Q ss_pred CCCeEEEECCCCChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC---------------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI--------------- 188 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~--------------- 188 (300)
...+++|+-||.|.+...+..... ..+.++|+++.+.+..+.+. +...++.+|+..+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~-------p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN-------PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC-------TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-------CCCccccccHHHHhhhccchhhhhhhhh
Confidence 456899999999999988865332 35789999999888777663 3455565554221
Q ss_pred CC-CCCcccEEEEcc
Q 022248 189 PV-SDASVDAVVGTL 202 (300)
Q Consensus 189 ~~-~~~~~D~v~~~~ 202 (300)
.+ ..+.+|+|+...
T Consensus 612 ~lp~~~~vDll~GGp 626 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGP 626 (1002)
T ss_dssp BCCCTTTCSEEEECC
T ss_pred hcccCCCeeEEEEcC
Confidence 11 135799999754
No 378
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.20 E-value=0.32 Score=41.85 Aligned_cols=93 Identities=19% Similarity=0.234 Sum_probs=61.4
Q ss_pred CCCeEEEEC-C-CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc--cC-cC-CCCCCcccEE
Q 022248 125 KAKKVLEIG-I-GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV--GE-AI-PVSDASVDAV 198 (300)
Q Consensus 125 ~~~~vLDiG-c-G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d--~~-~~-~~~~~~~D~v 198 (300)
++.+||=+| + |.|.++..+++..+++++++|.++..++.+++. |.. .++..+ .. .+ ......+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD----IVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS----EEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc----EEEECCccHHHHHHHhCCCCccEE
Confidence 678899884 4 457777788877788999999999888877763 321 112111 10 00 1123579999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+... .....+..+.+.|+++|+++.+.
T Consensus 222 ~d~~------g~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 222 FCTF------NTDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EESS------CHHHHHHHHHHHEEEEEEEEESS
T ss_pred EECC------CchHHHHHHHHHhccCCEEEEEC
Confidence 8642 22345688889999999997753
No 379
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.16 E-value=0.14 Score=43.74 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=62.3
Q ss_pred eEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-CCCCCcccEEEEcccc
Q 022248 128 KVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-PVSDASVDAVVGTLVL 204 (300)
Q Consensus 128 ~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~~l 204 (300)
+||=.|+ |.|.++.++++..+.+++++|.++...+.+++. |.. .+ +-..+.... ....+.+|+|+-.-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~--~v-i~~~~~~~~~~~~~~~~d~v~d~~g- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN--RI-LSRDEFAESRPLEKQLWAGAIDTVG- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS--EE-EEGGGSSCCCSSCCCCEEEEEESSC-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC--EE-EecCCHHHHHhhcCCCccEEEECCC-
Confidence 4898886 577888888887788999999999888887653 321 11 111111111 123457998885321
Q ss_pred cCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
. ..+....+.|+|+|+++.+...
T Consensus 221 ----~--~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 ----D--KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ----H--HHHHHHHHTEEEEEEEEECCCT
T ss_pred ----c--HHHHHHHHHHhcCCEEEEEecC
Confidence 1 2678999999999999997643
No 380
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.97 E-value=0.13 Score=44.81 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=59.3
Q ss_pred CCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
++.+||-+|+| .|.++..+++..+.+++++|.++..++.+++. .|.. .+ +-..+.+.+.-..+.+|+|+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~--~v-~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD--SF-LVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS--EE-EETTCHHHHHHTTTCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc--eE-EeccCHHHHHHhhCCCCEEEECCC
Confidence 67899999875 35666677766778999999998776665532 2321 11 111111111101146999996543
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
... .++...+.|+++|+++.+..
T Consensus 261 ~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 261 AVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp SCC------CSHHHHHHEEEEEEEEECCC
T ss_pred cHH------HHHHHHHHHhcCCEEEEEcc
Confidence 321 13667788999999998764
No 381
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.89 E-value=0.48 Score=42.53 Aligned_cols=94 Identities=16% Similarity=0.176 Sum_probs=63.3
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-------------
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI------------- 188 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~------------- 188 (300)
.++.+||=+|+ |.|.++..+++..+.++++++.++.-++.+++. |.. .++...-.++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE----AIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC----EEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc----EEEecCcCcccccccccccchHH
Confidence 56789999986 467788888887788999999999888877553 321 1121111100
Q ss_pred ---------C-CCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 189 ---------P-VSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 189 ---------~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
. .....+|+|+-.-. . ..+....+.|+++|.++++..
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEec
Confidence 0 12247999986432 1 357888899999999998754
No 382
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.81 E-value=0.024 Score=49.05 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=60.6
Q ss_pred CCCeEEEECCC-CChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CCCCcccE
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VSDASVDA 197 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D~ 197 (300)
++.+||-+|+| .|.++..+++..+. +++++|.++..++.+++. . +. ++..+-+++. .....+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a------~~--v~~~~~~~~~~~~~~~~~~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A------DR--LVNPLEEDLLEVVRRVTGSGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C------SE--EECTTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H------Hh--ccCcCccCHHHHHHHhcCCCCCE
Confidence 67899999985 36677777776777 899999998877666542 1 11 1111111110 01246999
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+....- ...++...+.|+++|+++.+..
T Consensus 235 vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 235 LLEFSGN------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 9864321 2356888999999999998764
No 383
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.79 E-value=0.26 Score=42.64 Aligned_cols=95 Identities=11% Similarity=0.097 Sum_probs=61.8
Q ss_pred CCC--CeEEEECC--CCChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCC
Q 022248 124 GKA--KKVLEIGI--GTGPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDA 193 (300)
Q Consensus 124 ~~~--~~vLDiGc--G~G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~ 193 (300)
.++ .+||-.|+ |.|..+..+++..+. +++++|.++..++.+++. .+. .. .+...-.+. ....+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~---~~-~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF---DA-AINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC---SE-EEETTTSCHHHHHHHHCTT
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC---ce-EEecCchHHHHHHHHhcCC
Confidence 466 89999997 566677777766777 999999998776666542 232 11 111111111 01122
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.+|+|+.... ...++...+.|+++|+++++..
T Consensus 230 ~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 230 GVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp CEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 6999997543 1457889999999999998764
No 384
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.53 E-value=0.16 Score=43.38 Aligned_cols=94 Identities=20% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCC-eEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-CCCCCcccEE
Q 022248 125 KAK-KVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-PVSDASVDAV 198 (300)
Q Consensus 125 ~~~-~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-~~~~~~~D~v 198 (300)
++. +||-+|+ |.|.++..+++..+.++++++.++..++.+++ .|.. .+ +-..+. +.+ ....+.+|+|
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~~-i~~~~~~~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK--EV-LAREDVMAERIRPLDKQRWAAA 220 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS--EE-EECC---------CCSCCEEEE
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc--EE-EecCCcHHHHHHHhcCCcccEE
Confidence 443 7999996 56788888887777899999998877777654 3321 11 111111 101 1223469999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+....-. .+....+.|+++|+++++..
T Consensus 221 id~~g~~-------~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 221 VDPVGGR-------TLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EECSTTT-------THHHHHHTEEEEEEEEECSC
T ss_pred EECCcHH-------HHHHHHHhhccCCEEEEEee
Confidence 8654321 36788899999999998764
No 385
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=91.25 E-value=2 Score=37.84 Aligned_cols=44 Identities=16% Similarity=-0.098 Sum_probs=34.1
Q ss_pred CCeEEEECCCCChhHHHhHhCC--Cce----EEEEcCCHHHHHHHHHHHH
Q 022248 126 AKKVLEIGIGTGPNLKYYAADT--DVQ----VLGVDPNRKMEKYAQTAAV 169 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~~~--~~~----~~giD~s~~~~~~a~~~~~ 169 (300)
..+|||+-||.|.+...+.+.. ... +.++|+++.+++.-+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 4589999999999888886532 113 7789999999888877764
No 386
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.19 E-value=0.46 Score=40.82 Aligned_cols=91 Identities=18% Similarity=0.101 Sum_probs=61.6
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 195 (300)
.++.+||-+|+ |.|.++..+++..+.+++++ .++..++.+++. +.. . +. +..++. .....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga~---~--i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GAT---P--ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TSE---E--EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CCC---E--ec-cCCCHHHHHHHHhcCCCc
Confidence 56789999994 56788888887778899999 788877766543 321 1 22 211110 123479
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+..-.- ..+....+.|+++|.++++..
T Consensus 218 D~vid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 218 DLVYDTLGG-------PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEEEESSCT-------HHHHHHHHHEEEEEEEEESCC
T ss_pred eEEEECCCc-------HHHHHHHHHHhcCCeEEEEcc
Confidence 999864331 357888899999999998653
No 387
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.89 E-value=0.59 Score=40.08 Aligned_cols=98 Identities=18% Similarity=0.148 Sum_probs=58.9
Q ss_pred CCCCeEEEECCCCC-hhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-C-C-CCCCcccEE
Q 022248 124 GKAKKVLEIGIGTG-PNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-I-P-VSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiGcG~G-~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~-~-~~~~~~D~v 198 (300)
.++.+||=+|+|.+ .++..+++ ..+.+|+++|.+++-++.+++. +.. .-+.....|..+ + . .....+|.+
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~-~~i~~~~~~~~~~v~~~t~g~g~d~~ 236 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GAD-VTINSGDVNPVDEIKKITGGLGVQSA 236 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCS-EEEEC-CCCHHHHHHHHTTSSCEEEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCe-EEEeCCCCCHHHHhhhhcCCCCceEE
Confidence 57889999999764 44445554 4678999999999877666543 321 011111112111 1 0 122356666
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.... -...+....+.|+++|.+++...
T Consensus 237 ~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 237 IVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEecc------CcchhheeheeecCCceEEEEec
Confidence 64321 13457888899999999998764
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.10 E-value=0.73 Score=39.10 Aligned_cols=92 Identities=18% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCCCeEEEEC-C-CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCCCCCcccEEEE
Q 022248 124 GKAKKVLEIG-I-GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPVSDASVDAVVG 200 (300)
Q Consensus 124 ~~~~~vLDiG-c-G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~ 200 (300)
.++.+||=+| + |.|.++..+++..+.++++++ ++...+.+++ .|.. .++...-.+ +.-.-..+|+|+-
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~----~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE----QCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS----EEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC----EEEeCCCcchhhhhccCCCEEEE
Confidence 5778999886 3 567888888887788999998 4544555443 3432 122211111 1111146999986
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.-. -. .+....+.|+++|+++.+.
T Consensus 222 ~~g------~~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 222 LVG------GD-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SSC------HH-HHHHHGGGEEEEEEEEECC
T ss_pred CCC------cH-HHHHHHHhccCCCEEEEeC
Confidence 432 12 2378899999999999865
No 389
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.05 E-value=7.5 Score=37.38 Aligned_cols=45 Identities=13% Similarity=0.003 Sum_probs=34.7
Q ss_pred CCCCeEEEECCCCChhHHHhHhCC------CceEEEEcCCHHHHHHHHHHH
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAADT------DVQVLGVDPNRKMEKYAQTAA 168 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~~~giD~s~~~~~~a~~~~ 168 (300)
.+..+|+|+-||-|.++.-+.... ...+.++|+++.+++..+.+.
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 345789999999999887775422 135779999999988887763
No 390
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.01 E-value=0.29 Score=41.84 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=40.2
Q ss_pred CCEEEEecccCc-CC-CCCCcccEEEEccc--cc------------CcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 176 TNFKFLQAVGEA-IP-VSDASVDAVVGTLV--LC------------SVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 176 ~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~--l~------------~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.+..++++|... +. +++++||+|++.=- .. ++......+.++.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 467888998764 33 56789999998421 11 11235678899999999999999965
No 391
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.78 E-value=4.9 Score=32.93 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=58.8
Q ss_pred CeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 127 KKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
++||=.| + |.++..+++ ..+.+|++++-++........ ..++++.+|+.++. -..+|+|+....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 5899999 4 888877765 356799999988765443332 36889999998866 467899997665
Q ss_pred ccCcccH--HHHHHHHHHcccCCcEEEEEe
Q 022248 204 LCSVKDV--DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 204 l~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.....+. ..+++.+.+.-..-+++++..
T Consensus 73 ~~~~~~~~~~~l~~a~~~~~~~~~~~v~~S 102 (286)
T 3ius_A 73 PDSGGDPVLAALGDQIAARAAQFRWVGYLS 102 (286)
T ss_dssp CBTTBCHHHHHHHHHHHHTGGGCSEEEEEE
T ss_pred ccccccHHHHHHHHHHHhhcCCceEEEEee
Confidence 5433322 233333333212224566544
No 392
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.61 E-value=0.85 Score=40.73 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=62.6
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCE-EEEeccc---------------
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNF-KFLQAVG--------------- 185 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~d~--------------- 185 (300)
.++.+||=.|+ |.|.++..+++..++++++++.++..++.+++ .|.. .+ .....+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~--~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCD--LVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCC--CEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCC--EEEecccccccccccccccccchhh
Confidence 57789999986 45777778887778899999999888777654 3332 11 1111111
Q ss_pred ----CcC-CCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 186 ----EAI-PVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 186 ----~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.+ ......+|+|+....- ..++...+.|+++|.++++..
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESCC
T ss_pred hHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEec
Confidence 000 0013469999864332 256788899999999999764
No 393
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.47 E-value=0.37 Score=41.10 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=61.1
Q ss_pred CCC-eEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEeccc--CcC-CCCCCcccEE
Q 022248 125 KAK-KVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVG--EAI-PVSDASVDAV 198 (300)
Q Consensus 125 ~~~-~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~--~~~-~~~~~~~D~v 198 (300)
++. +||-+|+ |.|.++..+++..+.++++++.+++.++.+++. |.. .+ +-..+. +.+ ....+.+|+|
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~--~v-~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GAS--EV-ISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCS--EE-EEHHHHCSSCCCSSCCCCEEEE
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc--EE-EECCCchHHHHHHhhcCCccEE
Confidence 443 7999996 567777788776677899999988777776542 321 11 111111 111 1223469998
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+.... . ..+....+.|+++|+++++..
T Consensus 222 id~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 222 VDPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred EECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 86432 2 257888999999999998764
No 394
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.31 E-value=1.2 Score=34.11 Aligned_cols=93 Identities=13% Similarity=0.084 Sum_probs=54.2
Q ss_pred CCCeEEEECCCCChhHHHhHh---CC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC----CC-CCCcc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI----PV-SDASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~~ 195 (300)
.+.+|+=+|+| .++..+++ .. +.+|+++|.++..++.+++ .+ +.++.+|..+. .. .-..+
T Consensus 38 ~~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g-----~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 38 GHAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG-----RNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TTCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT-----CCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC-----CCEEEcCCCCHHHHHhccCCCCC
Confidence 35689988875 45555443 34 7799999999987766543 22 34455665331 11 13468
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|+|+....- ......+-...+.+.|++.++...
T Consensus 107 d~vi~~~~~---~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPH---HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSS---HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeCCC---hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 988874311 111222334556667777877754
No 395
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=89.11 E-value=2.6 Score=35.88 Aligned_cols=97 Identities=19% Similarity=0.154 Sum_probs=61.0
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDV-QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 195 (300)
.++.+||=.|+|. |.++..+++..+. .++++|.++.-++.+++. |.. ..+...-.+.+ .....+
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~----~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM----QTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS----EEEETTTSCHHHHHHHHGGGCSS
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe----EEEeCCCCCHHHHHHhhcccCCc
Confidence 5788999999864 5566666665554 578999999887777653 321 22221111110 122457
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
|+|+.... ....++...+.|++||.+++.....
T Consensus 231 d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 231 QLILETAG------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp EEEEECSC------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred cccccccc------ccchhhhhhheecCCeEEEEEeccC
Confidence 88875432 1335688889999999999977544
No 396
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.44 E-value=1.1 Score=38.88 Aligned_cols=93 Identities=11% Similarity=0.068 Sum_probs=59.5
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCccc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 196 (300)
.++.+||=+|+ |.|.++..+++..+.+++++. ++.-++.+++ .|.. .++...-.++ ...++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~----~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE----EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS----EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc----EEEECCCchHHHHHHHHccCCcc
Confidence 46789999998 378888888887788999885 7776665543 3421 1222111111 11234599
Q ss_pred EEEEcccccCcccHHHHHHHHHHcc-cCCcEEEEEe
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVL-KPGGIYLFVE 231 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~L-kpgG~l~~~~ 231 (300)
+|+-.-.- ...+..+.+.| +++|+++.+.
T Consensus 234 ~v~d~~g~------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCITN------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSCS------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEEECCCc------hHHHHHHHHHhhcCCCEEEEEe
Confidence 99854321 23467778888 6999999865
No 397
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=88.25 E-value=3.2 Score=36.21 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=62.1
Q ss_pred CCCeEEEECCCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
.+.+||.++-+-|.++..+. ...+++.+.-|...... ++.+++. ..+ ... .....+.||+|+...--
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~--~~~~~~~~~~~~~~~~~----l~~~~~~---~~~-~~~---~~~~~~~~d~v~~~~Pk 111 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLE--GRMAVERLETSRAAFRC----LTASGLQ---ARL-ALP---WEAAAGAYDLVVLALPA 111 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGB--TTBEEEEEECBHHHHHH----HHHTTCC---CEE-CCG---GGSCTTCEEEEEEECCG
T ss_pred hCCcEEEecCCCCccccccC--CCCceEEEeCcHHHHHH----HHHcCCC---ccc-cCC---ccCCcCCCCEEEEECCc
Confidence 45789999999998877764 34577777555443322 5566664 122 111 22234689999975422
Q ss_pred c-CcccHHHHHHHHHHcccCCcEEEEEeccc
Q 022248 205 C-SVKDVDMTLQEVRRVLKPGGIYLFVEHVA 234 (300)
Q Consensus 205 ~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 234 (300)
. .....+..|..+.+.|+|||.+++.....
T Consensus 112 ~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~ 142 (381)
T 3dmg_A 112 GRGTAYVQASLVAAARALRMGGRLYLAGDKN 142 (381)
T ss_dssp GGCHHHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred chhHHHHHHHHHHHHHhCCCCCEEEEEEccH
Confidence 1 11123567899999999999999987543
No 398
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.67 E-value=0.24 Score=43.11 Aligned_cols=102 Identities=20% Similarity=0.218 Sum_probs=56.5
Q ss_pred CCCeEEEECCC-CChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
++.+||=+|+| .|.....++...+.+|+++|.++..++.+++.... .+..+..+...+.-.-..+|+|+..-.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS------RVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG------GSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc------eeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 45899999984 23333444445667999999999888777654321 222221111111100125899986543
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
......+.-+.++..+.++|||+++-+..
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 32211111113556678999998887543
No 399
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.22 E-value=6.9 Score=32.48 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=65.3
Q ss_pred CCCeEEEECCCC--C---hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C----
Q 022248 125 KAKKVLEIGIGT--G---PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V---- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~--G---~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 190 (300)
.++++|=.|++. | .++..|++ .+.+|+.++.++...+.+++.....+ ++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE-AGAELAFTYQGDALKKRVEPLAEELG----AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH-TTCEEEEEECSHHHHHHHHHHHHHHT----CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcC----CceEEECCCCCHHHHHHHHHHHH
Confidence 567899888763 3 23344443 57789999998766555555544433 5788888886532 0
Q ss_pred -CCCcccEEEEcccccC-------c-----ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 -SDASVDAVVGTLVLCS-------V-----KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 -~~~~~D~v~~~~~l~~-------~-----~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+.+|+++.+..... + .+. ..+++.+...++.+|.++.+..
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1147999998765432 1 111 1345667777778899888764
No 400
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=87.06 E-value=1 Score=39.16 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=58.5
Q ss_pred CCCCeEEEEC--CCCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC---CCCCcccEE
Q 022248 124 GKAKKVLEIG--IGTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---VSDASVDAV 198 (300)
Q Consensus 124 ~~~~~vLDiG--cG~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v 198 (300)
.++.+||=.| .|.|.++..+++..+.++++++ ++...+.++ +.|.. . ++..+-.++. .....+|+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~----~lGa~--~--v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR----KLGAD--D--VIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH----HTTCS--E--EEETTSSCHHHHHHTSCCBSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH----HcCCC--E--EEECCchHHHHHHhhcCCCCEE
Confidence 4678999998 3567788888876778999998 666555553 33431 1 1211111110 011469999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+....- ....+....+.|+++|+++.+..
T Consensus 253 id~~g~-----~~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 253 LDNVGG-----STETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp EESSCT-----THHHHGGGGBCSSSCCEEEESCC
T ss_pred EECCCC-----hhhhhHHHHHhhcCCcEEEEeCC
Confidence 864322 11245677889999999988763
No 401
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.98 E-value=6.6 Score=27.99 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=51.2
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
+.+|+=+|+ |..+..+++ ..+.+++++|.++..++.+++. . .+.++.+|..+.. ..-..+|+|
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~-----~~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I-----DALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C-----SSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c-----CcEEEEcCCCCHHHHHHcCcccCCEE
Confidence 357888877 555555543 3567899999998776655432 1 3445566653321 112468998
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
+...-. ......+..+.+.+.++ .+++
T Consensus 74 i~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 74 IAVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 875321 12223445566667775 4444
No 402
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.69 E-value=5.4 Score=32.42 Aligned_cols=106 Identities=8% Similarity=0.129 Sum_probs=66.5
Q ss_pred CCCeEEEECCC--CCh---hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C----
Q 022248 125 KAKKVLEIGIG--TGP---NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V---- 190 (300)
Q Consensus 125 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 190 (300)
.++++|=.|++ .|. ++..|++ .+.+|+.++.+....+.+++.....+- .++.++.+|+.+.. +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE-AGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH-CCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCCCCHHHHHHHHHHHH
Confidence 56788888876 332 3344443 577999999887666666655554432 26888999986642 0
Q ss_pred -CCCcccEEEEcccccC-------c-----ccHH-----------HHHHHHHHcccCCcEEEEEecc
Q 022248 191 -SDASVDAVVGTLVLCS-------V-----KDVD-----------MTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 191 -~~~~~D~v~~~~~l~~-------~-----~~~~-----------~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.-+.+|+++.+..... + .+.. .+++.+...++++|.++++...
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 1146899987655432 1 1111 2456677778888998887643
No 403
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.63 E-value=0.29 Score=42.82 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCCeEEEECCCCChhHHHh---HhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYY---AADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l---~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
++.+|+=+|+| ..+..+ +...+.+|+++|.++..++.+++.. +. .+.....+...+.-.-...|+|+..
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~---~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG---RIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT---SSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC---eeEeccCCHHHHHHHHcCCCEEEEC
Confidence 57899999984 444444 3346779999999998777665432 21 1111111111111001358999874
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
-.......+.-+.++..+.+||||+++-+.
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 321110111112356778899999887764
No 404
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.96 E-value=6.6 Score=32.22 Aligned_cols=104 Identities=15% Similarity=0.118 Sum_probs=66.9
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC------------HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN------------RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+ ...++.+...+...+ .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCCCHH
Confidence 5678888887655 4444443 357899999987 666666666665554 47889999986532
Q ss_pred -----C-----CCCcccEEEEcccccCc------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 190 -----V-----SDASVDAVVGTLVLCSV------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 190 -----~-----~~~~~D~v~~~~~l~~~------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+ .-+.+|+++.+...... .+. ..+++.+...++.+|.++.+..
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 0 01478999976554321 111 1245667777788898888653
No 405
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.84 E-value=0.22 Score=43.48 Aligned_cols=97 Identities=16% Similarity=0.244 Sum_probs=55.6
Q ss_pred CCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecc-------------------
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAV------------------- 184 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d------------------- 184 (300)
++.+|+=+|+|. |.....++...+.+|+++|.++..++.+++. | ..|+..+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l----G-----a~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV----G-----AQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT----T-----CEECCCC-------------CHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C-----CeEEeccccccccccchhhhhHHHHh
Confidence 568999999973 3444444445678999999999877776542 2 1222111
Q ss_pred --cCcCCCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 185 --GEAIPVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 185 --~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
...+.-.-...|+|+..-....-..+.-+-+++.+.+|||++++=+
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred hhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0011101156899996421111011111237888889999877654
No 406
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=85.77 E-value=20 Score=36.54 Aligned_cols=44 Identities=7% Similarity=-0.005 Sum_probs=34.8
Q ss_pred CCCeEEEECCCCChhHHHhHhCCC-ceEEEEcCCHHHHHHHHHHH
Q 022248 125 KAKKVLEIGIGTGPNLKYYAADTD-VQVLGVDPNRKMEKYAQTAA 168 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~~giD~s~~~~~~a~~~~ 168 (300)
...+++|+-||.|.+...+..... ..+.++|+++.+.+..+.+.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 457899999999999988865332 25789999999888777663
No 407
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.55 E-value=8.5 Score=31.49 Aligned_cols=105 Identities=15% Similarity=0.086 Sum_probs=65.7
Q ss_pred CCCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC-HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C----
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN-RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V---- 190 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 190 (300)
..++++|=.|++.| ++..+++ ..+.+|+.+|.. ....+...+.++..+ .++.++.+|+.+.. +
T Consensus 29 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 29 LAGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHH
Confidence 46778888887655 4444443 357788888654 455565555555544 37888889886532 0
Q ss_pred -CCCcccEEEEcccccCcc--------cH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 -SDASVDAVVGTLVLCSVK--------DV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 -~~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+..|+++.+....... +. ..+++.+.+.++++|.++++..
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 114789999765543211 11 1345677778888898888754
No 408
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.52 E-value=0.65 Score=40.45 Aligned_cols=99 Identities=21% Similarity=0.224 Sum_probs=54.5
Q ss_pred CCCeEEEECCCCChhHHHhH---hCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYA---ADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~---~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
++.+|+=+|+| ..+..++ ...+.+|+++|.++..++.+++.. +. .+.....+...+.-.-..+|+|+..
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~---~~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG---RVITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT---SEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc---eEEEecCCHHHHHHHHhCCCEEEEC
Confidence 46889999984 4444443 356779999999998776665432 21 2222111111111001368999865
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
-.......+.-+.+++.+.+++||.++.+.
T Consensus 237 ~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 237 VLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 432210111112467778889999887754
No 409
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=85.37 E-value=6.4 Score=33.17 Aligned_cols=78 Identities=12% Similarity=-0.029 Sum_probs=53.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.+++||=.|++.| ++..+++ ..+.+|++++.+...++.+.+.+...+.. .++.++..|+.+.. + .
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG-PEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC-CeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4668888887765 4444433 35779999999998888887777655432 37888999986532 0 1
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+++.+...
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 1478999987654
No 410
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=85.27 E-value=3.4 Score=33.54 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=65.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----------C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV----------S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~----------~ 191 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.++..++...+.+ + .++.++.+|+.+..- .
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G---PRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G---GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CcceEEEccCCCHHHHHHHHHHHHHH
Confidence 5678888887655 4444443 35779999999988777665544 1 378889999865420 1
Q ss_pred CCcccEEEEcccccCcc--------cH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 192 DASVDAVVGTLVLCSVK--------DV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-+.+|+++.+....... +. ..+.+.+...++.+|.++.+..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 14789999765443221 11 1235666667777888888754
No 411
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=84.89 E-value=2.3 Score=38.53 Aligned_cols=91 Identities=20% Similarity=0.115 Sum_probs=56.0
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..+++|+=+|+|. |.....+++..+.+|+++|.++...+.+++ .|. .+ .+.++. . ...|+|+...
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~Ga-----~~--~~l~e~-l--~~aDvVi~at 337 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EGF-----DV--VTVEEA-I--GDADIVVTAT 337 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC-----EE--CCHHHH-G--GGCSEEEECS
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC-----EE--ecHHHH-H--hCCCEEEECC
Confidence 4788999999852 333333344467799999999987666543 232 22 222222 1 3689999754
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEecc
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.-.++-+ .+..+.+|+||+++.+...
T Consensus 338 gt~~~i~-----~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKDIIM-----LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSCSBC-----HHHHHHSCTTCEEEECSSS
T ss_pred CCHHHHH-----HHHHHhcCCCcEEEEeCCC
Confidence 3333211 3566778999999887643
No 412
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=84.87 E-value=0.33 Score=42.78 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=31.6
Q ss_pred CCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHH
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQT 166 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~ 166 (300)
++.+|+=+|+|. |.....++...+++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 568999999973 444444555678899999999987777654
No 413
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.84 E-value=2.2 Score=37.78 Aligned_cols=92 Identities=11% Similarity=0.128 Sum_probs=60.3
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
..+|+=+|+ |.++..+++ ..+..|++||.++..++.+++. .+.++.+|+.+.. ..-...|+|
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~---------g~~vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF---------GMKVFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT---------TCCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC---------CCeEEEcCCCCHHHHHhcCCCccCEE
Confidence 457888887 455555554 4678999999999998887642 3456778876532 223568888
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++...- ......+....+.+.|+..+++-.
T Consensus 73 iv~~~~---~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 73 INAIDD---PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EECCSS---HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EECCCC---hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 864311 122334566677788888887754
No 414
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.73 E-value=1.7 Score=37.36 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=53.3
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEE-cCCHHHHHHHHHHHHHcCCCCCCEEEEe-----cccCcCCCCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGV-DPNRKMEKYAQTAAVAAGLPLTNFKFLQ-----AVGEAIPVSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~gi-D~s~~~~~~a~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~~ 195 (300)
.++.+||=+|+ |.|.++.++++..+++++++ +.++... ...+.++..|.. .+ +-. .++.++--..+.+
T Consensus 166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~-~~~~~~~~lGa~--~v-i~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 1zsy_A 166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQ-KLSDRLKSLGAE--HV-ITEEELRRPEMKNFFKDMPQP 241 (357)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHH-HHHHHHHHTTCS--EE-EEHHHHHSGGGGGTTSSSCCC
T ss_pred CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchH-HHHHHHHhcCCc--EE-EecCcchHHHHHHHHhCCCCc
Confidence 47789999996 57788888887666666555 4433211 111223334432 22 111 1111111111248
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|+|+-.-. . . .+.+..+.|+++|+++++.
T Consensus 242 Dvvid~~g-----~-~-~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 242 RLALNCVG-----G-K-SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SEEEESSC-----H-H-HHHHHHTTSCTTCEEEECC
T ss_pred eEEEECCC-----c-H-HHHHHHHhhCCCCEEEEEe
Confidence 99985432 1 1 1245789999999999875
No 415
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.64 E-value=5.4 Score=33.30 Aligned_cols=77 Identities=12% Similarity=0.025 Sum_probs=54.3
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.+++||=.|++.| ++..+++ ..+.+|+++|.+...++.+.+.+...+ .++.++.+|+.+.. + .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 5678888887655 4444443 357799999999998888877776654 37888999986642 0 0
Q ss_pred CCcccEEEEccccc
Q 022248 192 DASVDAVVGTLVLC 205 (300)
Q Consensus 192 ~~~~D~v~~~~~l~ 205 (300)
-+.+|+++.+....
T Consensus 106 ~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 106 LGGVDVVFSNAGIV 119 (301)
T ss_dssp HSSCSEEEECCCCC
T ss_pred CCCCCEEEECCCcC
Confidence 14789999876543
No 416
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=84.33 E-value=0.76 Score=33.66 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=31.4
Q ss_pred CCCCCcccEEEEccccc-C-cccHHHHHHHHHHcccCCcEEEE
Q 022248 189 PVSDASVDAVVGTLVLC-S-VKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 189 ~~~~~~~D~v~~~~~l~-~-~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
.++++.||.|+...--. . ..-+..++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 46789999999755333 2 22237889999999999999987
No 417
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=83.75 E-value=5 Score=32.59 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=64.7
Q ss_pred CCCCeEEEECCC-CChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C----
Q 022248 124 GKAKKVLEIGIG-TGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V---- 190 (300)
Q Consensus 124 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 190 (300)
.++++||=.|++ +|.++..+++ ..+.+|+.++.+....+.+++.....+ ++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCCCHHHHHHHHHHHH
Confidence 467889988875 2444555543 357799999988665555555444432 4678888886532 0
Q ss_pred -CCCcccEEEEcccccC-----------cc--cH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 -SDASVDAVVGTLVLCS-----------VK--DV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 -~~~~~D~v~~~~~l~~-----------~~--~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+..|+++.+..... .. +. ..+++.+...++++|.++++..
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 1147899997655432 11 11 1245666667777888888764
No 418
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.29 E-value=4.1 Score=33.95 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=64.8
Q ss_pred CCCeEEEECCCC-ChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++. ..++..+++ ..+.+|+.+|.++...+.+++.....+ .+.++.+|+.+.. +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG----VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT----CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC----CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 567888888753 223333333 357799999998766666555554443 4578888886532 0
Q ss_pred CCCcccEEEEcccccCc------------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCSV------------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~------------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+.+|+++.+...... .+. ..+++.+...++.+|.++.+..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 11478999987654321 111 1245666777778899888764
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=83.20 E-value=7.8 Score=32.10 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=64.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHH-HHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRK-MEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~-~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+.. ..+...+..+..+ .++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 5678888887655 4444443 35779999998764 3444444444443 37888999986532 0
Q ss_pred CCCcccEEEEcccccC----c-----ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCS----V-----KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~----~-----~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+.+|+++.+..... + .+. ..+++.+.+.++.+|.++.+..
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 1146899997644321 1 111 1345677777888898887653
No 420
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=83.09 E-value=8.3 Score=31.98 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=65.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC--HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN--RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V---- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s--~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+ ....+...+.++..+ .++.++.+|+.+.. +
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHHHHH
Confidence 5678888887654 4444443 357789999876 344555555555544 37888888886532 0
Q ss_pred -CCCcccEEEEcccccC----cc-----cH-----------HHHHHHHHHcccCCcEEEEEecc
Q 022248 191 -SDASVDAVVGTLVLCS----VK-----DV-----------DMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 191 -~~~~~D~v~~~~~l~~----~~-----~~-----------~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.-+..|+++.+..... +. +. ..+++.+...++.+|.++.+...
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 1147899997665432 11 11 13456777778888998887643
No 421
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=82.26 E-value=7.1 Score=31.69 Aligned_cols=106 Identities=10% Similarity=0.118 Sum_probs=67.4
Q ss_pred CCCeEEEECCCC--C--h-hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------
Q 022248 125 KAKKVLEIGIGT--G--P-NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP---------- 189 (300)
Q Consensus 125 ~~~~vLDiGcG~--G--~-~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------- 189 (300)
+++++|=-|++. | . .+..|+ ..+++|+.+|.++..++.+.+.+++.+- .++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 678888888532 3 2 333444 3678999999999888888877766543 36788888886531
Q ss_pred CCCCcccEEEEcccccCc-------c-----cHH-----------HHHHHHHHcccCCcEEEEEecc
Q 022248 190 VSDASVDAVVGTLVLCSV-------K-----DVD-----------MTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 190 ~~~~~~D~v~~~~~l~~~-------~-----~~~-----------~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
-.-+..|+++.+...... . +.. ...+.....++.+|.++.+...
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 012678999876543211 1 111 1234455667889998887643
No 422
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.08 E-value=0.45 Score=41.99 Aligned_cols=41 Identities=24% Similarity=0.242 Sum_probs=29.7
Q ss_pred CCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHH
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQ 165 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~ 165 (300)
++.+|+=+|+|. |.....++...+.+|+++|.++..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 478999999863 33444445556789999999988776653
No 423
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.05 E-value=2.8 Score=31.14 Aligned_cols=95 Identities=13% Similarity=-0.018 Sum_probs=52.2
Q ss_pred CCCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC---C-CCCCccc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI---P-VSDASVD 196 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---~-~~~~~~D 196 (300)
.++.+|+=+|+| .++..+++ ..+.+|+++|.++..++.++. . ..+.++.+|..+. . ..-..+|
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~-----~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E-----FSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T-----CCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c-----CCCcEEEecCCCHHHHHHcCcccCC
Confidence 356789999875 44444433 456799999998875544321 1 1234555554321 1 1124689
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+|+....- +.....+..+.+.+.+...++...
T Consensus 87 ~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 87 MVFAFTND---DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp EEEECSSC---HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEeCC---cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 88875321 122233444555556666666544
No 424
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.88 E-value=0.55 Score=41.13 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHH
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQT 166 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~ 166 (300)
++.+|+=+|+|. |.....++...+.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 678999999863 334444455567789999999876666543
No 425
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=81.83 E-value=4.9 Score=32.54 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=64.6
Q ss_pred CCCeEEEECCCCChhHHHhHh---C-CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---D-TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS---- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~-~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 191 (300)
++++||=.| |+|.++..+++ . .+.+|++++.+....+...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 356677555 55666666654 3 57799999998877776666665543 36788888886532 00
Q ss_pred -CCcccEEEEcccccCc--------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 192 -DASVDAVVGTLVLCSV--------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 -~~~~D~v~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-+.+|+|+.+...... .+. ..+++.+.+.++++|.++++..
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 1368999976543211 111 1245566666667788887653
No 426
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=81.83 E-value=0.7 Score=39.73 Aligned_cols=91 Identities=5% Similarity=0.012 Sum_probs=55.5
Q ss_pred CeEEEE-CC-CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCcccEE
Q 022248 127 KKVLEI-GI-GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDASVDAV 198 (300)
Q Consensus 127 ~~vLDi-Gc-G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~D~v 198 (300)
.+||=. |+ |.|.++..+++..+++++++|.++.-++.+++. |.. ..+..+-.++. .....+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~----~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA----HVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS----EEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC----EEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 456543 33 356666677766678999999999888777643 321 12221111110 011369999
Q ss_pred EEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 199 VGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 199 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
+-...- ..+..+.+.|+++|+++++..
T Consensus 238 id~~g~-------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 238 LDAVTG-------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EESSCH-------HHHHHHHHHSCTTCEEEECCC
T ss_pred EECCCC-------hhHHHHHhhhcCCCEEEEEec
Confidence 864322 124778899999999999763
No 427
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=80.76 E-value=5.2 Score=32.49 Aligned_cols=76 Identities=14% Similarity=-0.031 Sum_probs=48.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcC-CHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDP-NRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS---- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 191 (300)
.+++||=.|+ +|.++..+++ ..+.++++++. ++..++...+.++..+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4567886665 5556666554 35678999988 7776666655555443 36888888886532 10
Q ss_pred -CCcccEEEEcccc
Q 022248 192 -DASVDAVVGTLVL 204 (300)
Q Consensus 192 -~~~~D~v~~~~~l 204 (300)
-+.+|+|+.+...
T Consensus 96 ~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 96 HFGGLDFVMSNSGM 109 (274)
T ss_dssp HHSCEEEEECCCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368999876543
No 428
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=80.71 E-value=4.4 Score=32.96 Aligned_cols=104 Identities=11% Similarity=0.029 Sum_probs=63.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEE-cCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGV-DPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~gi-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+ +.+....+.+.+.++..+ .++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678888887665 4444433 357788887 666666666666665444 36788888886532 0
Q ss_pred CCCcccEEEEccccc-C---cc-----cH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLC-S---VK-----DV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~-~---~~-----~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+..|+++.+.... . +. +. ..+.+.+...++++|.++.+..
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 014789999765432 1 11 11 1245666667777888887653
No 429
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=80.70 E-value=13 Score=30.82 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC------------HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN------------RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.++++|=.|++.| ++..+++ ..+.+|+++|.+ ...++.+.+.+...+ .++.++.+|+.+..
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG---RRIIASQVDVRDFD 102 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC---CceEEEECCCCCHH
Confidence 5678888887665 4444433 357899999987 666666666665554 47889999986532
Q ss_pred -----C-----CCCcccEEEEcccc
Q 022248 190 -----V-----SDASVDAVVGTLVL 204 (300)
Q Consensus 190 -----~-----~~~~~D~v~~~~~l 204 (300)
+ .-+..|+++.+...
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 0 11478999976553
No 430
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.69 E-value=12 Score=30.78 Aligned_cols=78 Identities=13% Similarity=-0.010 Sum_probs=53.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-C----C------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-P----V------ 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~----~------ 190 (300)
.+++||=.|++.| ++.++++ ..+.+|++++.+....+.+.+.+...+- .++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 4567777776544 5555543 3577999999999888777777665542 4789999998764 2 0
Q ss_pred CCCcccEEEEccccc
Q 022248 191 SDASVDAVVGTLVLC 205 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~ 205 (300)
.-+.+|+++.+....
T Consensus 88 ~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 88 HFGKLDILVNNAGVA 102 (311)
T ss_dssp HHSSCCEEEECCCCC
T ss_pred hCCCCCEEEECCccc
Confidence 114799999877654
No 431
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.57 E-value=14 Score=33.07 Aligned_cols=96 Identities=20% Similarity=0.297 Sum_probs=55.7
Q ss_pred CeEEEECCCC-Ch-hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHH-------cC------CCCCCEEEEecccCcCCCC
Q 022248 127 KKVLEIGIGT-GP-NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVA-------AG------LPLTNFKFLQAVGEAIPVS 191 (300)
Q Consensus 127 ~~vLDiGcG~-G~-~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~-------~~------~~~~~~~~~~~d~~~~~~~ 191 (300)
.+|.=||+|. |. ++..++ ..+.+|+++|.+++.++.+++.+.. .+ .......+ ..|.+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 4688898875 22 233333 4577999999999988887664321 11 00011222 3343222
Q ss_pred CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 192 DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
...|+|+..- .....-...+++++...++|+.+++.
T Consensus 113 -~~aDlVIeaV-pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 -STVDLVVEAV-FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -TTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCCCEEEEcC-CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 3579888643 22221235678888888988876553
No 432
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.55 E-value=7.9 Score=30.64 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=46.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCE-EEEecccC-cCCCCCCcccEEE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNF-KFLQAVGE-AIPVSDASVDAVV 199 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~d~~-~~~~~~~~~D~v~ 199 (300)
.+++||=.|+ +|.++..+++ ..+.+|++++-++..++.... ..+ .++.+|+. .+.-.-+.+|+|+
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---------RGASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---------TTCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---------CCCceEEEcccHHHHHHHHcCCCEEE
Confidence 5678887774 5555655554 357799999998876544332 256 78888875 2211124689999
Q ss_pred EcccccC
Q 022248 200 GTLVLCS 206 (300)
Q Consensus 200 ~~~~l~~ 206 (300)
.......
T Consensus 90 ~~ag~~~ 96 (236)
T 3e8x_A 90 FAAGSGP 96 (236)
T ss_dssp ECCCCCT
T ss_pred ECCCCCC
Confidence 8766543
No 433
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.07 E-value=1.2 Score=37.95 Aligned_cols=55 Identities=18% Similarity=0.118 Sum_probs=36.6
Q ss_pred CEEEE-ecccCcC--CCCCCcccEEEEcc--cc---------cCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 177 NFKFL-QAVGEAI--PVSDASVDAVVGTL--VL---------CSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 177 ~~~~~-~~d~~~~--~~~~~~~D~v~~~~--~l---------~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
...++ ++|.... .+++++||+|++.= .. .++......+.++.++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 35566 7887542 24567899999731 11 111234567889999999999999865
No 434
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=79.82 E-value=7.4 Score=30.59 Aligned_cols=90 Identities=14% Similarity=0.080 Sum_probs=55.5
Q ss_pred eEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEEEE
Q 022248 128 KVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAVVG 200 (300)
Q Consensus 128 ~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v~~ 200 (300)
+|+=+|+ |.++..+++ ..+..++++|.+++.++...+. ..+.++.+|..+.. ..-...|+|++
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~--------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK--------LKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH--------SSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--------cCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 4666665 666666654 3577999999999887765443 14567888876531 11246898887
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
...- ......+....+.+.|...++..
T Consensus 72 ~~~~---d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 72 LTPR---DEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CCSC---HHHHHHHHHHHHHTSCCCEEEEC
T ss_pred ecCC---cHHHHHHHHHHHHHcCCCeEEEE
Confidence 4311 11233455566666677776653
No 435
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=79.73 E-value=7.4 Score=32.16 Aligned_cols=101 Identities=16% Similarity=0.090 Sum_probs=65.8
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------CC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------VS 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~~ 191 (300)
+++++|=-|++.| .+..+++ ..+++|+.+|.+++.++.+.+.+ + .++.++.+|+.+.. -.
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 6778888887766 4444443 36789999999998877665543 3 36677888876532 01
Q ss_pred CCcccEEEEcccccCc--------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 192 DASVDAVVGTLVLCSV--------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-+..|+++.+...... .++ -.+.+.+...++.+|.++.+..
T Consensus 101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 2578999976544322 111 1245677778888888877653
No 436
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.22 E-value=7.5 Score=31.59 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=62.5
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC---HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C---
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN---RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V--- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s---~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~--- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.++.+ ...++.+.+.++..+ .++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHHH
Confidence 5678888887655 4555544 357789988654 344455544444443 47888999986532 0
Q ss_pred --CCCcccEEEEcccccCcc--------cH-----------HHHHHHHHHcccCCcEEEEEe
Q 022248 191 --SDASVDAVVGTLVLCSVK--------DV-----------DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 191 --~~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.-+..|+++.+....... +. ..+.+.+...++++|.++++.
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 114789999766543211 11 123556666677788888865
No 437
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.17 E-value=12 Score=30.26 Aligned_cols=106 Identities=16% Similarity=0.045 Sum_probs=61.3
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS----- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 191 (300)
.++++|=.|++. .++..+++ ..+.+|+++|.++...+.+.+.+.... ...++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQ-GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 456788777654 44555443 357799999998876665544443211 0136788888886532 00
Q ss_pred CCcccEEEEcccccCcccHHH-----------HHHHHHHcccC-----CcEEEEEec
Q 022248 192 DASVDAVVGTLVLCSVKDVDM-----------TLQEVRRVLKP-----GGIYLFVEH 232 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~~~~~-----------~l~~~~~~Lkp-----gG~l~~~~~ 232 (300)
-+.+|+++.+.......+.+. ..+.+.+.++. +|.++.+..
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred cCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 136899998766543333322 23444444532 578877654
No 438
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=78.91 E-value=9.5 Score=31.35 Aligned_cols=76 Identities=12% Similarity=0.016 Sum_probs=50.1
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcC-CHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC----------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDP-NRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV---------- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~---------- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|. ++..++...+.+...+ .++.++.+|+.+...
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4667887776655 4444443 35779999985 7776666666665554 378899999876431
Q ss_pred CCCcccEEEEcccc
Q 022248 191 SDASVDAVVGTLVL 204 (300)
Q Consensus 191 ~~~~~D~v~~~~~l 204 (300)
.-+..|+++.+...
T Consensus 104 ~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 104 EFGRIDCLVNNAGI 117 (280)
T ss_dssp HHSCCCEEEEECC-
T ss_pred HcCCCCEEEECCCc
Confidence 01478999976654
No 439
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=78.74 E-value=5.5 Score=29.87 Aligned_cols=109 Identities=13% Similarity=0.129 Sum_probs=62.9
Q ss_pred HHHHHHHhhcCCCCeEEEECCCCChhHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCc-CCC-
Q 022248 114 YKSQLFDNLRGKAKKVLEIGIGTGPNLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEA-IPV- 190 (300)
Q Consensus 114 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~- 190 (300)
.+.....+...-.+-|||+|-|+|+.-.+|.+ .++-.++.+|-.-.. .-... ++.-.++.+|+.+ ++.
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~--------hp~~~-P~~e~~ilGdi~~tL~~~ 99 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS--------HPDST-PPEAQLILGDIRETLPAT 99 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC--------CGGGC-CCGGGEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc--------CCCCC-CchHheecccHHHHHHHH
Confidence 34445555555677899999999998888876 577789999842110 00011 2334466666644 221
Q ss_pred ---CCCcccEEEEcccccCcccHHH----HHHHHHHcccCCcEEEEEe
Q 022248 191 ---SDASVDAVVGTLVLCSVKDVDM----TLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 191 ---~~~~~D~v~~~~~l~~~~~~~~----~l~~~~~~LkpgG~l~~~~ 231 (300)
-....-++......++-..-.. +-.-+..+|.|||+++-..
T Consensus 100 ~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 100 LERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp HHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 1344555665554444321111 2244667788998777644
No 440
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=78.74 E-value=17 Score=26.58 Aligned_cols=95 Identities=5% Similarity=-0.108 Sum_probs=56.5
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCC-HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN-RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDA 197 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 197 (300)
..+|+=+|+ |..+..+++ ..+.+++++|.+ +...+....... ..+.++.+|..+.. ..-+..|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG------DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC------TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc------CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 456777775 666666654 357799999997 444444333221 24678888875431 11246888
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|++...- ......+....+.+.|...++...
T Consensus 75 vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 75 ILALSDN---DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp EEECSSC---HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EEEecCC---hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 8875321 122334556666777777777644
No 441
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=77.95 E-value=1.7 Score=37.53 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=56.1
Q ss_pred CCC-CeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCE-EEEe---cccC-cCC-C---C
Q 022248 124 GKA-KKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNF-KFLQ---AVGE-AIP-V---S 191 (300)
Q Consensus 124 ~~~-~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~-~~~~---~d~~-~~~-~---~ 191 (300)
.++ .+||=+|+ |.|.++.++++..+.+++++.-+...++..++.+++.|.. .+ .... .++. .+. . .
T Consensus 165 ~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~--~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 165 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT--QVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS--EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe--EEEecCccchHHHHHHHHHHhhcc
Confidence 466 89998886 5677888888766778888865443311111222334432 11 1110 1111 110 0 1
Q ss_pred CCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 192 DASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
...+|+|+-.-. . ... ....+.|+++|+++.+..
T Consensus 243 ~~g~Dvvid~~G-----~-~~~-~~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 243 GGEAKLALNCVG-----G-KSS-TGIARKLNNNGLMLTYGG 276 (364)
T ss_dssp TCCEEEEEESSC-----H-HHH-HHHHHTSCTTCEEEECCC
T ss_pred CCCceEEEECCC-----c-hhH-HHHHHHhccCCEEEEecC
Confidence 246999985432 1 122 367799999999998764
No 442
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=77.68 E-value=1.1 Score=36.92 Aligned_cols=21 Identities=14% Similarity=0.112 Sum_probs=17.8
Q ss_pred HHHHHHHHHcccCCcEEEEEe
Q 022248 211 DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 211 ~~~l~~~~~~LkpgG~l~~~~ 231 (300)
...+.++.++|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 467888999999999998864
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=77.59 E-value=7.7 Score=32.37 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=52.6
Q ss_pred CCCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEE-ecccCcCCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFL-QAVGEAIPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~D~v~ 199 (300)
..+++|+=||+| ..+..+++ ..+.+++++|.++...+.+.+ .+ +... ..+..++ -...|+|+
T Consensus 155 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g-----~~~~~~~~l~~~---l~~aDvVi 220 (300)
T 2rir_A 155 IHGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAHLARITE----MG-----LVPFHTDELKEH---VKDIDICI 220 (300)
T ss_dssp STTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TT-----CEEEEGGGHHHH---STTCSEEE
T ss_pred CCCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CC-----CeEEchhhHHHH---hhCCCEEE
Confidence 467899999985 34444443 467799999998865443322 22 2222 1222222 14689999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.....+.+. ++....+|||++++=+.
T Consensus 221 ~~~p~~~i~------~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 221 NTIPSMILN------QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp ECCSSCCBC------HHHHTTSCTTCEEEECS
T ss_pred ECCChhhhC------HHHHHhCCCCCEEEEEe
Confidence 866554332 23457789998766554
No 444
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=77.01 E-value=15 Score=29.97 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=50.8
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcC-------------CHHHHHHHHHHHHHcCCCCCCEEEEecccCcC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDP-------------NRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI 188 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~-------------s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 188 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|. +...++...+.+...+ .++.++.+|+.+.
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAVVDTRDF 85 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTTCH
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCCCH
Confidence 5678888887655 4444433 35779999997 6666666666665554 4788888888653
Q ss_pred C-----CC-----CCcccEEEEccccc
Q 022248 189 P-----VS-----DASVDAVVGTLVLC 205 (300)
Q Consensus 189 ~-----~~-----~~~~D~v~~~~~l~ 205 (300)
. +. -+..|+++.+....
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 2 11 14689999866543
No 445
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=76.80 E-value=2.6 Score=35.00 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=30.9
Q ss_pred CcccEEEEccccc----C-c--ccHH----HHHHHHHHcccCCcEEEEEecccC
Q 022248 193 ASVDAVVGTLVLC----S-V--KDVD----MTLQEVRRVLKPGGIYLFVEHVAA 235 (300)
Q Consensus 193 ~~~D~v~~~~~l~----~-~--~~~~----~~l~~~~~~LkpgG~l~~~~~~~~ 235 (300)
+.+|+|++..... + - .|.. -++....++|+|||.+++..+...
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 6799999865433 2 1 2222 246778899999999999987665
No 446
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.52 E-value=29 Score=28.17 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=68.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------CC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------VS 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~~ 191 (300)
+++++|=-|++.| .+..+++ ..+++|+.+|.+++.++.+.+.+...+ .++.++.+|+.+.. -.
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 6777777776665 4444443 367899999999999988888887766 36888888886531 12
Q ss_pred CCcccEEEEcccccCcc--------cHH-----------HHHHHHHHcc---cCCcEEEEEec
Q 022248 192 DASVDAVVGTLVLCSVK--------DVD-----------MTLQEVRRVL---KPGGIYLFVEH 232 (300)
Q Consensus 192 ~~~~D~v~~~~~l~~~~--------~~~-----------~~l~~~~~~L---kpgG~l~~~~~ 232 (300)
-+..|+++.+....... +++ .+.+.+.+.+ +.+|.++.+..
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS 146 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS 146 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEee
Confidence 36799999876544321 111 2345566655 24688887654
No 447
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=76.40 E-value=20 Score=29.01 Aligned_cols=105 Identities=19% Similarity=0.151 Sum_probs=65.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcC-CHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDP-NRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.++. +....+...+.++..+ .++.++.+|+.+.. +
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5677887776554 4444443 35778888765 4555666666665554 47888999986532 0
Q ss_pred CCCcccEEEEcccccCcc--------cH-----------HHHHHHHHHcccCCcEEEEEecc
Q 022248 191 SDASVDAVVGTLVLCSVK--------DV-----------DMTLQEVRRVLKPGGIYLFVEHV 233 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~~~ 233 (300)
.-+..|+++.+....... +. ..+.+.+.+.++++|.++++...
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 114689999765543221 11 13456777788889998887643
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=76.07 E-value=6.9 Score=32.57 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=51.5
Q ss_pred CCCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEe-cccCcCCCCCCcccEEE
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQ-AVGEAIPVSDASVDAVV 199 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~ 199 (300)
..+++|+=||+| ..+..+++ ..+.+++++|.++...+.++ ..+ +.+.. .+..++ -...|+|+
T Consensus 153 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g-----~~~~~~~~l~~~---l~~aDvVi 218 (293)
T 3d4o_A 153 IHGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDLLARIA----EMG-----MEPFHISKAAQE---LRDVDVCI 218 (293)
T ss_dssp STTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT-----SEEEEGGGHHHH---TTTCSEEE
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC-----CeecChhhHHHH---hcCCCEEE
Confidence 467899999976 34444433 45679999999986544432 222 22221 122221 14689999
Q ss_pred EcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 200 GTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 200 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
...-.+.+. ++....+|||++++-+.
T Consensus 219 ~~~p~~~i~------~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 219 NTIPALVVT------ANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp ECCSSCCBC------HHHHHHSCTTCEEEECS
T ss_pred ECCChHHhC------HHHHHhcCCCCEEEEec
Confidence 765443332 23445689998776554
No 449
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=76.00 E-value=10 Score=30.91 Aligned_cols=75 Identities=17% Similarity=0.085 Sum_probs=55.1
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------CC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------VS 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~~ 191 (300)
+++++|=-|.+.| .+..+++ ..+++|+.+|.+++.++.+.+.++..+ .++.++.+|+.+.. -.
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 6778888887776 3444433 367899999999999999888887776 37888999986532 01
Q ss_pred CCcccEEEEccc
Q 022248 192 DASVDAVVGTLV 203 (300)
Q Consensus 192 ~~~~D~v~~~~~ 203 (300)
-+..|+++.+..
T Consensus 82 ~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 YSRIDVLCNNAG 93 (254)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 267999997654
No 450
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=75.79 E-value=17 Score=28.28 Aligned_cols=94 Identities=19% Similarity=0.071 Sum_probs=56.2
Q ss_pred eEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC-CCCcccEEEEccc
Q 022248 128 KVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV-SDASVDAVVGTLV 203 (300)
Q Consensus 128 ~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~ 203 (300)
+||=.| |+|.++..+++ ..+.+|++++-++..+.... ..+++++.+|+.+... .-+.+|+|+....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL---------GATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT---------CTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc---------CCCceEEecccccccHhhcccCCEEEECCc
Confidence 466666 45666666654 35779999998876543221 1368889999866431 1146899997665
Q ss_pred ccCc----ccHHHHHHHHHHcccC-CcEEEEEe
Q 022248 204 LCSV----KDVDMTLQEVRRVLKP-GGIYLFVE 231 (300)
Q Consensus 204 l~~~----~~~~~~l~~~~~~Lkp-gG~l~~~~ 231 (300)
..+. .........+.+.++. |++++++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 5321 1122334556666654 56777764
No 451
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.27 E-value=25 Score=28.59 Aligned_cols=78 Identities=17% Similarity=0.131 Sum_probs=51.3
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS----- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 191 (300)
.+++||=.|++ |.++..+++ ..+.+|++++.++..++...+.++..+.. .++.++.+|+.+.. +.
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 45678877754 445555543 35779999999988777776666655432 36788888886532 00
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+|+.+...
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 1368999976553
No 452
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=75.02 E-value=16 Score=29.42 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=48.4
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.++++|=.|++.| ++.++++ ..+.+|+.+|.+...++...+.+ + .++.++.+|+.+.. + .
T Consensus 7 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 7 EGKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAAEI---G---PAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C---CCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 5677888886544 4444443 35779999999987766655544 2 36788888886532 0 1
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+++.+...
T Consensus 80 ~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 80 AGGLDILVNNAAL 92 (259)
T ss_dssp SSSCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999987654
No 453
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.01 E-value=2.2 Score=36.54 Aligned_cols=91 Identities=19% Similarity=0.256 Sum_probs=52.5
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCC-CceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcC-----CCCCCcc
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADT-DVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAI-----PVSDASV 195 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~-~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~ 195 (300)
.++.+||=.|+ |.|.++.++++.. +..+++++ ++...+.++ .+.. . ++..+ .++ ....+.+
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~--~--~~~~~-~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT--H--LFDRN-ADYVQEVKRISAEGV 209 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS--E--EEETT-SCHHHHHHHHCTTCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc--E--EEcCC-ccHHHHHHHhcCCCc
Confidence 57789999987 3567777777654 57899988 554444433 2321 1 22211 111 1123579
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+-.-.-. .+....+.|+++|+++++..
T Consensus 210 Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 210 DIVLDCLCGD-------NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp EEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred eEEEECCCch-------hHHHHHHHhhcCCEEEEECC
Confidence 9999543211 13678899999999998764
No 454
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.86 E-value=13 Score=31.29 Aligned_cols=90 Identities=18% Similarity=0.168 Sum_probs=52.8
Q ss_pred CCeEEEECCCC-C-hhHHHhHhCCCc--eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 126 AKKVLEIGIGT-G-PNLKYYAADTDV--QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 126 ~~~vLDiGcG~-G-~~~~~l~~~~~~--~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
..+|.=||+|. | .++..+.+ .+. +|+++|.+++.++.+.+ .+. +.-...+..++ .-...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~~~~~~a~~----~G~----~~~~~~~~~~~--~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAVD----LGI----IDEGTTSIAKV--EDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHHH----TTS----CSEEESCTTGG--GGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCHHHHHHHHH----CCC----cchhcCCHHHH--hhccCCEEEEe
Confidence 36788898763 2 23333333 444 89999999987776653 232 11122333320 11357998875
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
--. .....+++++...|+||..++-
T Consensus 102 vp~---~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 SPV---RTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp SCG---GGHHHHHHHHHHHSCTTCEEEE
T ss_pred CCH---HHHHHHHHHHhhccCCCcEEEE
Confidence 322 2345678889889999875543
No 455
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=74.60 E-value=13 Score=30.35 Aligned_cols=104 Identities=15% Similarity=0.131 Sum_probs=63.8
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCC------------HHHHHHHHHHHHHcCCCCCCEEEEecccCcCC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPN------------RKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP 189 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 189 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+ ...++...+.+...+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVRDRE 87 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTTCHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCCCHH
Confidence 5678888886554 4444443 357899999976 666666666555554 47889999986532
Q ss_pred -----C-----CCCcccEEEEcccccCcc----cHH-----------HHHHHHHHccc---CCcEEEEEec
Q 022248 190 -----V-----SDASVDAVVGTLVLCSVK----DVD-----------MTLQEVRRVLK---PGGIYLFVEH 232 (300)
Q Consensus 190 -----~-----~~~~~D~v~~~~~l~~~~----~~~-----------~~l~~~~~~Lk---pgG~l~~~~~ 232 (300)
+ .-+..|+++.+....... +.+ .+++.+...++ .+|.++++..
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS 158 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence 1 014789999876554321 111 23444555443 3688887654
No 456
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=74.17 E-value=15 Score=29.96 Aligned_cols=104 Identities=19% Similarity=0.092 Sum_probs=63.3
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEE-cCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGV-DPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~gi-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++.| ++..+++ ..+.+++.+ +.+....+...+.+...+ .++.++.+|+.+.. +
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678888887655 4444433 246678776 445556666666665554 36888888886532 0
Q ss_pred CCCcccEEEEcccccCcc--------cH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCSVK--------DV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~~--------~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+..|+++.+....... +. ..+++.+.+.++++|.++.+..
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 114789999766543221 11 1245667777778888888753
No 457
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=73.93 E-value=13 Score=30.28 Aligned_cols=84 Identities=15% Similarity=0.086 Sum_probs=48.8
Q ss_pred eEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcccc
Q 022248 128 KVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVL 204 (300)
Q Consensus 128 ~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 204 (300)
+|.=||+|. ++..++. ..+.+++++|.++..++.+.+ .+.. .. ...+..+. ...|+|+..--.
T Consensus 2 ~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~-~~~~~~~~----~~~D~vi~av~~ 67 (279)
T 2f1k_A 2 KIGVVGLGL--IGASLAGDLRRRGHYLIGVSRQQSTCEKAVE----RQLV---DE-AGQDLSLL----QTAKIIFLCTPI 67 (279)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTSC---SE-EESCGGGG----TTCSEEEECSCH
T ss_pred EEEEEcCcH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCC---cc-ccCCHHHh----CCCCEEEEECCH
Confidence 567788764 3333332 345689999999887666532 2321 11 12233322 468998874321
Q ss_pred cCcccHHHHHHHHHHcccCCcEEE
Q 022248 205 CSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 205 ~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
.....++.++...++|+..++
T Consensus 68 ---~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 68 ---QLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ---HHHHHHHHHHGGGSCTTCEEE
T ss_pred ---HHHHHHHHHHHhhCCCCCEEE
Confidence 133566788888888877554
No 458
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=73.33 E-value=32 Score=27.21 Aligned_cols=74 Identities=16% Similarity=0.057 Sum_probs=48.9
Q ss_pred CCCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC------CCCCc
Q 022248 124 GKAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP------VSDAS 194 (300)
Q Consensus 124 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~ 194 (300)
.++++||=.|++.| ++..+++ ..+.+|+.++.+...++...+.+. .++.+..+|+.+.. -.-+.
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK------DNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------SSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc------cCccEEEcCCCCHHHHHHHHHhcCC
Confidence 46778887776544 4555543 357899999999887776655442 46888888876531 11247
Q ss_pred ccEEEEcccc
Q 022248 195 VDAVVGTLVL 204 (300)
Q Consensus 195 ~D~v~~~~~l 204 (300)
.|+++.+...
T Consensus 85 id~li~~Ag~ 94 (249)
T 3f9i_A 85 LDILVCNAGI 94 (249)
T ss_dssp CSEEEECCC-
T ss_pred CCEEEECCCC
Confidence 8999976554
No 459
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=72.76 E-value=23 Score=28.96 Aligned_cols=74 Identities=22% Similarity=0.144 Sum_probs=48.8
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.++..++.+.+.+ + .++.++.+|+.+.. + .
T Consensus 28 ~gk~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 28 AGKVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKI---G---CGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp TTCEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCCCHHHHHHHHHHHHHH
Confidence 5677887777655 4444433 35779999999988776665544 2 36788888886542 0 1
Q ss_pred CCcccEEEEccccc
Q 022248 192 DASVDAVVGTLVLC 205 (300)
Q Consensus 192 ~~~~D~v~~~~~l~ 205 (300)
-+..|+++.+....
T Consensus 101 ~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 101 FGGVDKLVANAGVV 114 (277)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 14789999776543
No 460
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.99 E-value=31 Score=28.47 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=50.6
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS----- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 191 (300)
.++++|=.|++ |.++..+++ ..+.+|++++.++..++...+.+...+....++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSS-NGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 45677766654 445555544 35779999999988777766666554321126888888886532 10
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+++.+...
T Consensus 104 ~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 104 FGKIDILVNNAGA 116 (297)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368999986553
No 461
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=71.56 E-value=29 Score=28.59 Aligned_cols=93 Identities=15% Similarity=0.147 Sum_probs=51.6
Q ss_pred CeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEE------Eec---ccCcCCCCCCc
Q 022248 127 KKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKF------LQA---VGEAIPVSDAS 194 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~------~~~---d~~~~~~~~~~ 194 (300)
.+|.=||+|. ++..++. ..+.+|+++|.+++.++..++. ++ .+.. ... +..+..-.-..
T Consensus 4 m~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGA--MGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GL---IADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CE---EEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCH--HHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CE---EEEeCCCeeEecceeecchhhcccCCC
Confidence 4788888863 3333332 3466999999998776665543 21 1110 000 11111100126
Q ss_pred ccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 195 VDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 195 ~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
+|+|+..--- .....+++++...++|+..++...
T Consensus 75 ~d~vi~~v~~---~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 75 VDLIIALTKA---QQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CSEEEECSCH---HHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CCEEEEEecc---ccHHHHHHHHHHhcCCCCEEEEec
Confidence 8998874322 234567788888888887666543
No 462
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=71.38 E-value=24 Score=29.70 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=55.2
Q ss_pred CeEEEECCCC-C-hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHH-------HcCCCCC---------CEEEEecccCcC
Q 022248 127 KKVLEIGIGT-G-PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAV-------AAGLPLT---------NFKFLQAVGEAI 188 (300)
Q Consensus 127 ~~vLDiGcG~-G-~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~-------~~~~~~~---------~~~~~~~d~~~~ 188 (300)
.+|-=||+|. | .++..++ ..+.+|+++|.+++.++.+.+.+. ..++... ++.+. .|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 4677888764 1 2333333 357799999999999988876532 2232101 23332 222211
Q ss_pred CCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 189 PVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 189 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
-...|+|+..- .....-...++.++...++|+..++-
T Consensus 85 ---v~~aDlVieav-pe~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 85 ---VEGVVHIQECV-PENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp ---TTTEEEEEECC-CSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred ---HhcCCEEEEec-cCCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 13578888532 22111234678889999998875543
No 463
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=71.36 E-value=28 Score=28.40 Aligned_cols=76 Identities=17% Similarity=0.070 Sum_probs=52.1
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCC---------CC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPV---------SD 192 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~ 192 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 32 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 32 RGRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 5677887776544 4555443 357799999998887777777666554 478889999866420 11
Q ss_pred CcccEEEEcccc
Q 022248 193 ASVDAVVGTLVL 204 (300)
Q Consensus 193 ~~~D~v~~~~~l 204 (300)
+.+|+++.+...
T Consensus 108 g~iD~lvnnAg~ 119 (275)
T 4imr_A 108 APVDILVINASA 119 (275)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 578999986654
No 464
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=71.07 E-value=5.6 Score=35.65 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=46.0
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
.++|+=+||| ..+..+++ ..+..++.||.+++.++.+...+ .+..+.+|+.... ..-+..|++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~~~~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--------DLRVVNGHASHPDVLHEAGAQDADML 72 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence 3567766665 56666665 35678999999999988877653 5678899986642 122568888
Q ss_pred EEc
Q 022248 199 VGT 201 (300)
Q Consensus 199 ~~~ 201 (300)
++.
T Consensus 73 ia~ 75 (461)
T 4g65_A 73 VAV 75 (461)
T ss_dssp EEC
T ss_pred EEE
Confidence 863
No 465
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=70.89 E-value=21 Score=28.15 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=55.9
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDA 197 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 197 (300)
...+|+=+|+ |..+..+++ ..+. ++++|.++..++.++ . .+.++.+|..+.. ..-...|+
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~-----~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S-----GANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T-----TCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c-----CCeEEEcCCCCHHHHHhcCcchhcE
Confidence 3457888887 567766665 3456 999999988766554 1 4677888876431 12346888
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|++...- ......+....+.+.|+..++...
T Consensus 75 vi~~~~~---d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 75 VIVDLES---DSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEECCSC---HHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEcCCC---cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 8875311 112233455666678877776644
No 466
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=69.97 E-value=29 Score=27.91 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=57.4
Q ss_pred CCCeEEEECCCC-ChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------C
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------V 190 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 190 (300)
.++++|=.|++. |..+..+++ ..+.+|+.+|.++...+.+++.....+ ...++.+|+.+.. -
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG----SDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC----CcEEEEccCCCHHHHHHHHHHHHH
Confidence 456788888652 445555544 357799999887622222222222222 2366777875531 1
Q ss_pred CCCcccEEEEcccccC-----------c--ccHH-----------HHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCS-----------V--KDVD-----------MTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~-----------~--~~~~-----------~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+.+|+++.+..... . .+.+ .+++.+.+.++++|.++.+..
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 149 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 149 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence 1247899998765432 1 1111 234555666666788888764
No 467
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=69.48 E-value=45 Score=27.31 Aligned_cols=78 Identities=14% Similarity=-0.004 Sum_probs=51.9
Q ss_pred CCCeEEEECCCCChhHHHhHh----C--CCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--------C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA----D--TDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--------V 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~----~--~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--------~ 190 (300)
.++++|=.|++.| ++..+++ . ....|+.++.+...++.+.+.+...... .++.++.+|+.+.. .
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN-AKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT-CEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEECCCCCHHHHHHHHHHH
Confidence 5678888887655 4444443 2 2238999999998888877776654211 36888888886542 1
Q ss_pred --CCCcccEEEEcccc
Q 022248 191 --SDASVDAVVGTLVL 204 (300)
Q Consensus 191 --~~~~~D~v~~~~~l 204 (300)
.-+..|+++.+...
T Consensus 110 ~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 110 PQEFKDIDILVNNAGK 125 (287)
T ss_dssp CGGGCSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 12479999987654
No 468
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=69.16 E-value=15 Score=30.20 Aligned_cols=95 Identities=14% Similarity=0.042 Sum_probs=54.9
Q ss_pred CeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHc---------CCCC-------CCEEEEecccCc
Q 022248 127 KKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAA---------GLPL-------TNFKFLQAVGEA 187 (300)
Q Consensus 127 ~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~---------~~~~-------~~~~~~~~d~~~ 187 (300)
.+|.=||+|. ++..++. ..+.+|+.+|.+++.++.+.+.+... ++.. .++.+ ..+..+
T Consensus 5 ~kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 4677787764 4444433 35779999999999988887653221 1110 01222 222221
Q ss_pred CCCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEE
Q 022248 188 IPVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 188 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
. -...|+|+..- .....-...+++++...++|+..++
T Consensus 82 ~---~~~aDlVi~av-~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIEAV-PESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEECC-CSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEEec-cCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 13578888632 2222234567888989999887654
No 469
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=68.91 E-value=22 Score=28.85 Aligned_cols=104 Identities=13% Similarity=0.016 Sum_probs=59.0
Q ss_pred CCCeEEEECCC-CChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIG-TGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG-~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++ +|.++..+++ ..+.+|+.++.++. .+...+.+.... .++.++.+|+.+.. +
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 45688888875 2445555544 35789999998775 222222222211 13567788876532 0
Q ss_pred CCCcccEEEEcccccCc------------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCSV------------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~------------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.-+.+|+++.+...... .+. ..+++.+...++++|.++.+..
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 11468999987654321 111 1234555666666788888764
No 470
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=68.36 E-value=6.2 Score=34.93 Aligned_cols=89 Identities=18% Similarity=0.063 Sum_probs=51.5
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..+++|+=+|+|. |......++..+.+|+++|.++.....+.. .+ +.+ .++++. -...|+|+...
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~----~G-----~~v--~~Leea---l~~ADIVi~at 283 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM----DG-----FRL--VKLNEV---IRQVDIVITCT 283 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TT-----CEE--CCHHHH---TTTCSEEEECS
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHH----cC-----CEe--ccHHHH---HhcCCEEEECC
Confidence 4678999999875 333333344578899999999865444332 22 111 222222 13578888743
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.-.++- -.+....+|+|++++-+.
T Consensus 284 gt~~lI-----~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 284 GNKNVV-----TREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SCSCSB-----CHHHHHHSCTTEEEEECS
T ss_pred CCcccC-----CHHHHHhcCCCcEEEEec
Confidence 222221 135667789998776654
No 471
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.89 E-value=25 Score=28.32 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=53.4
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+...++.+.+.+...+ .++.++.+|+.+.. + .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678888887766 3334333 357799999999988888877776654 47889999986532 0 1
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+..|+++.+...
T Consensus 86 ~g~id~lv~nAg~ 98 (264)
T 3ucx_A 86 YGRVDVVINNAFR 98 (264)
T ss_dssp TSCCSEEEECCCS
T ss_pred cCCCcEEEECCCC
Confidence 2478999976533
No 472
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=66.80 E-value=52 Score=27.52 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=50.0
Q ss_pred eEEEECCCCChhHHHhHh---CCCc--eEEEEcCCHHHHHHHHHHHHH-cCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 128 KVLEIGIGTGPNLKYYAA---DTDV--QVLGVDPNRKMEKYAQTAAVA-AGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 128 ~vLDiGcG~G~~~~~l~~---~~~~--~~~giD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
+|.=||+|. .+..++. ..+. +++.+|.++..++.....+.. .... ....+...|.+.+ ...|+|+..
T Consensus 2 kI~VIGaG~--~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~-~~~~i~~~d~~~~----~~aDvViia 74 (319)
T 1a5z_A 2 KIGIVGLGR--VGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT-RRANIYAGDYADL----KGSDVVIVA 74 (319)
T ss_dssp EEEEECCSH--HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS-CCCEEEECCGGGG----TTCSEEEEC
T ss_pred EEEEECCCH--HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhc-CCcEEEeCCHHHh----CCCCEEEEc
Confidence 567788753 3333332 2233 899999998777665433321 1110 1222322343222 457998875
Q ss_pred ccccCccc-------------HHHHHHHHHHcccCCcEEEEEe
Q 022248 202 LVLCSVKD-------------VDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 202 ~~l~~~~~-------------~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
-.....+. ...+++.+.+. .|++.+++..
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~t 116 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVVT 116 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 44332221 13445555555 5899888754
No 473
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=66.60 E-value=23 Score=28.88 Aligned_cols=87 Identities=16% Similarity=0.110 Sum_probs=48.8
Q ss_pred eEEEECCCCChhHHHhHh---CCCc--eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCC-cccEEEEc
Q 022248 128 KVLEIGIGTGPNLKYYAA---DTDV--QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDA-SVDAVVGT 201 (300)
Q Consensus 128 ~vLDiGcG~G~~~~~l~~---~~~~--~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~D~v~~~ 201 (300)
+|.=||+|. ++..++. ..+. +|+++|.++..++.+++ .+.. .. ...+..+. -. ..|+|+..
T Consensus 3 ~I~iIG~G~--mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~---~~-~~~~~~~~---~~~~aDvVila 69 (281)
T 2g5c_A 3 NVLIVGVGF--MGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGII---DE-GTTSIAKV---EDFSPDFVMLS 69 (281)
T ss_dssp EEEEESCSH--HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSC---SE-EESCGGGG---GGTCCSEEEEC
T ss_pred EEEEEecCH--HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCCc---cc-ccCCHHHH---hcCCCCEEEEc
Confidence 577788764 3333332 2344 89999999887766542 2321 01 11222221 13 57988864
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
--.. ....++.++...++++..++..
T Consensus 70 vp~~---~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 70 SPVR---TFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp SCHH---HHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCHH---HHHHHHHHHHhhCCCCcEEEEC
Confidence 3221 2345677888889988755543
No 474
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=66.56 E-value=52 Score=27.12 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=54.0
Q ss_pred CCeEEEECCCC-Ch-hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHH-------cCCCC-------------CCEEEEec
Q 022248 126 AKKVLEIGIGT-GP-NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVA-------AGLPL-------------TNFKFLQA 183 (300)
Q Consensus 126 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~-------~~~~~-------------~~~~~~~~ 183 (300)
-.+|.=||+|. |. ++..+++ .+.+|+++|.+++.++.+++.+.. .+.-. .++.+. .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~ 92 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-T 92 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-S
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-c
Confidence 35788899874 22 3333443 467999999999988876553321 22100 023332 2
Q ss_pred ccCcCCCCCCcccEEEEcccccCcccHHHHHHHHHHcccCCcEEE
Q 022248 184 VGEAIPVSDASVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 184 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
|..+. -...|+|+..- .....-...+++++...++|+..++
T Consensus 93 ~~~~~---~~~aD~Vi~av-p~~~~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 93 DAASV---VHSTDLVVEAI-VENLKVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp CHHHH---TTSCSEEEECC-CSCHHHHHHHHHHHTTTSCTTCEEE
T ss_pred CHHHh---hcCCCEEEEcC-cCcHHHHHHHHHHHHhhCCCCeEEE
Confidence 22211 13578888642 2221123567788888888876543
No 475
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=66.56 E-value=19 Score=30.53 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=51.5
Q ss_pred CeEEEECCCC-C-hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCC-----CC---CEEEEecccCcCCCCCCccc
Q 022248 127 KKVLEIGIGT-G-PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLP-----LT---NFKFLQAVGEAIPVSDASVD 196 (300)
Q Consensus 127 ~~vLDiGcG~-G-~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~-----~~---~~~~~~~d~~~~~~~~~~~D 196 (300)
.+|.=||+|. | .++..|+ ..+.+|+++|.+++.++..++.. ++. .+ ++.....+..+. -..+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~-~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLA-LKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLA---VKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHHH---HTTCS
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHHHH---HhcCC
Confidence 5788898864 2 2223333 34678999999988776655431 110 00 000011121110 13589
Q ss_pred EEEEcccccCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 197 AVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 197 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
+|+..---. ....+++.+...+++|..++..
T Consensus 78 ~vi~~v~~~---~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVVPAI---HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEEECSCGG---GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEeCCch---HHHHHHHHHHHhCCCCCEEEEc
Confidence 888754222 2356778888889887765544
No 476
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=66.47 E-value=24 Score=24.92 Aligned_cols=93 Identities=14% Similarity=0.012 Sum_probs=50.4
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccE
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDA 197 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 197 (300)
+..+|+=+|+ |..+..+++ ..+.+++++|.++..++.+++ . ...++.+|..+.. ..-+.+|+
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~-----~~~~~~~d~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y-----ATHAVIANATEENELLSLGIRNFEY 73 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T-----CSEEEECCTTCHHHHHTTTGGGCSE
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h-----CCEEEEeCCCCHHHHHhcCCCCCCE
Confidence 3457998987 556655544 356789999998765443321 1 2345556654321 11246899
Q ss_pred EEEcccccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 198 VVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 198 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
|+...... .+....+....+.+.+. .+++..
T Consensus 74 vi~~~~~~--~~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 74 VIVAIGAN--IQASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp EEECCCSC--HHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred EEECCCCc--hHHHHHHHHHHHHcCCC-eEEEEe
Confidence 88754221 01222344455556665 555543
No 477
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=66.46 E-value=21 Score=30.15 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=57.4
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----CCCCcccEE
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----VSDASVDAV 198 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 198 (300)
..+|+=+|+ |..+..+++ ..+. ++.+|.+++.++ +++ ..+.++.+|..+.. ..-+..|.|
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---------~~~~~i~gd~~~~~~L~~a~i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---------SGANFVHGDPTRVSDLEKANVRGARAV 181 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---------TTCEEEESCTTSHHHHHHTCSTTEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---------CCcEEEEeCCCCHHHHHhcChhhccEE
Confidence 457887776 667777765 3466 999999998877 543 25678889886532 223568888
Q ss_pred EEcccccCcccH-HHHHHHHHHcccCCcEEEEEe
Q 022248 199 VGTLVLCSVKDV-DMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 199 ~~~~~l~~~~~~-~~~l~~~~~~LkpgG~l~~~~ 231 (300)
++... .|. .-......+.+.|+..++...
T Consensus 182 i~~~~----~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 182 IVDLE----SDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp EECCS----SHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred EEcCC----ccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 87431 122 223455667778887777643
No 478
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=66.44 E-value=15 Score=29.67 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=50.1
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCce-EEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQ-VLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~-~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
..+|.=||+| .++..++. ..+.+ +.++|.+++.++.+.+.. + +.+ ..+.++. -...|+|+..
T Consensus 10 ~m~i~iiG~G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~---g-----~~~-~~~~~~~---~~~~Dvvi~a 75 (266)
T 3d1l_A 10 DTPIVLIGAG--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKV---E-----AEY-TTDLAEV---NPYAKLYIVS 75 (266)
T ss_dssp GCCEEEECCS--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT---T-----CEE-ESCGGGS---CSCCSEEEEC
T ss_pred CCeEEEEcCC--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---C-----Cce-eCCHHHH---hcCCCEEEEe
Confidence 3578889986 33333332 23455 899999988776654432 2 222 2233222 1357999874
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEEE
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
---. ....+++++...+++|..++-.
T Consensus 76 v~~~---~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 76 LKDS---AFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCHH---HHHHHHHHHHTTCCTTCEEEEC
T ss_pred cCHH---HHHHHHHHHHhhcCCCcEEEEC
Confidence 3222 2355677777778777655543
No 479
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=66.22 E-value=4.7 Score=38.91 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=57.5
Q ss_pred CCCCeEEEECC--CCChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC--------CCCC
Q 022248 124 GKAKKVLEIGI--GTGPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP--------VSDA 193 (300)
Q Consensus 124 ~~~~~vLDiGc--G~G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~ 193 (300)
.++.+||=.|+ |.|.++.++++..+++|++++.+++ .+.++ .+. +.+ + |..+.. ....
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~-----lga--~~v--~--~~~~~~~~~~i~~~t~g~ 411 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE-----LSR--EHL--A--SSRTCDFEQQFLGATGGR 411 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC-----SCG--GGE--E--CSSSSTHHHHHHHHSCSS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh-----cCh--hhe--e--ecCChhHHHHHHHHcCCC
Confidence 46789999984 6788889999878889999986542 11111 111 111 1 111111 1234
Q ss_pred cccEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 194 SVDAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 194 ~~D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.+|+|+-...-. .+....+.|+|+|+++.+..
T Consensus 412 GvDvVld~~gg~-------~~~~~l~~l~~~Gr~v~iG~ 443 (795)
T 3slk_A 412 GVDVVLNSLAGE-------FADASLRMLPRGGRFLELGK 443 (795)
T ss_dssp CCSEEEECCCTT-------TTHHHHTSCTTCEEEEECCS
T ss_pred CeEEEEECCCcH-------HHHHHHHHhcCCCEEEEecc
Confidence 699999744322 35788899999999999764
No 480
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=66.20 E-value=20 Score=28.58 Aligned_cols=76 Identities=18% Similarity=0.137 Sum_probs=53.2
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. + .
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5678888887554 4444443 357799999999998888877776654 47888889986532 0 0
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+++.+...
T Consensus 84 ~g~id~li~~Ag~ 96 (253)
T 3qiv_A 84 FGGIDYLVNNAAI 96 (253)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1378999987654
No 481
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=66.08 E-value=16 Score=29.73 Aligned_cols=76 Identities=14% Similarity=0.011 Sum_probs=51.1
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS----- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 191 (300)
.++++|=.|++.| .+..+++ ..+.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5677888876544 4555543 357799999999887776666665544 36888888886532 10
Q ss_pred -CCcccEEEEcccc
Q 022248 192 -DASVDAVVGTLVL 204 (300)
Q Consensus 192 -~~~~D~v~~~~~l 204 (300)
++.+|+++.+...
T Consensus 96 ~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 96 FDGKLNILVNNAGV 109 (273)
T ss_dssp TTSCCCEEEECCCC
T ss_pred cCCCCcEEEECCCC
Confidence 1678999987654
No 482
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=65.43 E-value=23 Score=28.54 Aligned_cols=77 Identities=18% Similarity=0.153 Sum_probs=52.7
Q ss_pred CCCeEEEECC-CCCh---hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGI-GTGP---NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|+ |.|. ++..|++ .+.+|+.+|.+...++.+.+.++..+- .++.++.+|+.+.. +
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL-EGADVVISDYHERRLGETRDQLADLGL--GRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTTCS--SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH-CCCEEEEecCCHHHHHHHHHHHHhcCC--CceEEEEeCCCCHHHHHHHHHHHHH
Confidence 5678888887 5552 3344443 577999999999888887777655432 47899999986532 0
Q ss_pred CCCcccEEEEcccc
Q 022248 191 SDASVDAVVGTLVL 204 (300)
Q Consensus 191 ~~~~~D~v~~~~~l 204 (300)
.-+.+|+++.+...
T Consensus 98 ~~g~id~li~~Ag~ 111 (266)
T 3o38_A 98 KAGRLDVLVNNAGL 111 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCcEEEECCCc
Confidence 11468999987654
No 483
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=65.01 E-value=14 Score=29.67 Aligned_cols=75 Identities=15% Similarity=0.003 Sum_probs=53.4
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC----------CC
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP----------VS 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~----------~~ 191 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.++..++.+.+.++..+ .++.++.+|+.+.. -.
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 5677888887665 4444443 357799999999988888877776654 47889999986532 11
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
+.+|+++.+...
T Consensus 82 -g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 -APLEVTIFNVGA 93 (252)
T ss_dssp -SCEEEEEECCCC
T ss_pred -CCceEEEECCCc
Confidence 578999976654
No 484
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=64.99 E-value=1.7 Score=36.23 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=27.0
Q ss_pred ccHHHHHHHHHHcccCCcEEEEEecccCCCchHHH
Q 022248 208 KDVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLK 242 (300)
Q Consensus 208 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~ 242 (300)
......|..+.++|+|||+++++.++..++.....
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLEDRiVK~ 244 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKR 244 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHHHHHHH
Confidence 34567899999999999999999987765544333
No 485
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=64.64 E-value=29 Score=28.98 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=53.3
Q ss_pred CCCeEEEECCCC-Ch-hHHHhHh-CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 125 KAKKVLEIGIGT-GP-NLKYYAA-DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~-~~~~l~~-~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
+..+|.=||+|. |. ++..++. ....+++.+|++++....+...... . .+++... .|.+.+ ...|+|+..
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~-~--~~~i~~t-~d~~~l----~~aD~Vi~a 84 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF-N--LPNVEIS-KDLSAS----AHSKVVIFT 84 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH-T--CTTEEEE-SCGGGG----TTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh-c--CCCeEEe-CCHHHH----CCCCEEEEc
Confidence 346899999985 32 3333333 3344899999998644444444432 1 1355543 454333 457899876
Q ss_pred cccc------------CcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 202 LVLC------------SVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 202 ~~l~------------~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
.... .++-...+++++.+.. |++++++..+
T Consensus 85 ag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 85 VNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp CCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCC
Confidence 4221 1111244566666654 9999888664
No 486
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=64.50 E-value=37 Score=27.63 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=58.5
Q ss_pred CCCeEEEECCCC-ChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----
Q 022248 125 KAKKVLEIGIGT-GPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V----- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~-G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 190 (300)
.++++|=.|++. |.++..+++ ..+.+|+.++.++...+.+++.....+ ++.++.+|+.+.. +
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~----~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG----SDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 567888888752 445555544 357899999988752222222222222 3567788876532 0
Q ss_pred CCCcccEEEEcccccCc------------ccHH-----------HHHHHHHHccc-CCcEEEEEec
Q 022248 191 SDASVDAVVGTLVLCSV------------KDVD-----------MTLQEVRRVLK-PGGIYLFVEH 232 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~~~------------~~~~-----------~~l~~~~~~Lk-pgG~l~~~~~ 232 (300)
.-+.+|+++.+...... .+.+ .+++.+.+.++ .+|.++.+..
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS 161 (285)
T 2p91_A 96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY 161 (285)
T ss_dssp HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 11478999987654321 1111 23455555554 5688887764
No 487
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=63.84 E-value=63 Score=26.90 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCCeEEEECCCC-C-hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCC--CCCEEEE-----ecccCcCCCCCCcc
Q 022248 125 KAKKVLEIGIGT-G-PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLP--LTNFKFL-----QAVGEAIPVSDASV 195 (300)
Q Consensus 125 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~--~~~~~~~-----~~d~~~~~~~~~~~ 195 (300)
...+|.=||+|. | .++..|+ ..+.+|+.+ ..++.++..++. ++. .+...+. ..+.+. ...+
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~~~----~~~~ 87 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDPSA----VQGA 87 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCGGG----GTTC
T ss_pred cCCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCHHH----cCCC
Confidence 557899998874 2 2333333 356689999 888776666543 210 0011110 112211 2468
Q ss_pred cEEEEcccccCcccHHHHHHHHHHcccCCcEEEEEec
Q 022248 196 DAVVGTLVLCSVKDVDMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 196 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
|+|+..--- .+...+++.+...++|+..++....
T Consensus 88 D~vilavk~---~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 88 DLVLFCVKS---TDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp SEEEECCCG---GGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred CEEEEEccc---ccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 998874322 2456788899999999877666553
No 488
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=63.66 E-value=32 Score=27.79 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=51.6
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.+++||=.|++ |.++..+++ ..+.+|+++|.++..++...+.++..+ .++.++.+|+.+.. + .
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 56778877765 445555554 357799999999887777666665544 36888999986532 0 1
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+|+.+...
T Consensus 106 ~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 106 IGDVSILVNNAGV 118 (272)
T ss_dssp TCCCSEEEECCCC
T ss_pred CCCCcEEEECCCc
Confidence 1468999976654
No 489
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=63.49 E-value=24 Score=28.79 Aligned_cols=79 Identities=20% Similarity=0.041 Sum_probs=53.7
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----C-----C
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----V-----S 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 191 (300)
.++++|=.|++.| .+.++++ ..+.+|+.+|.++..++.+.+.++..+....++.++.+|+.+.. + .
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5678888887554 4444443 35779999999998888877777665432237888999986532 0 1
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+..|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999976654
No 490
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=63.47 E-value=44 Score=29.54 Aligned_cols=39 Identities=28% Similarity=0.289 Sum_probs=25.8
Q ss_pred CCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHH
Q 022248 126 AKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQT 166 (300)
Q Consensus 126 ~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~ 166 (300)
+.++-=||.|. ++..++. ..+.+|+++|++++.++...+
T Consensus 11 ~~~~~ViGlGy--vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 11 GSKLTVVGLGY--IGLPTSIMFAKHGVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp -CEEEEECCST--THHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred CCccEEEeeCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence 44555666653 4443332 357899999999998887765
No 491
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=63.20 E-value=2.5 Score=36.10 Aligned_cols=37 Identities=22% Similarity=0.441 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHcccCCcEEEEEecccCCCchHHHHHH
Q 022248 209 DVDMTLQEVRRVLKPGGIYLFVEHVAAKDGTFLKFWQ 245 (300)
Q Consensus 209 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 245 (300)
.....|..+.++|+|||+|+++.++..++....++++
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFHSLEDRiVK~~f~ 288 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMR 288 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCchhHHHHHHHHH
Confidence 3467789999999999999999988766544444443
No 492
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=63.12 E-value=43 Score=27.18 Aligned_cols=104 Identities=16% Similarity=0.144 Sum_probs=61.8
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHH-HHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRK-MEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS---- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~-~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 191 (300)
.++++|=.|++ |.++..+++ ..+.+|++++.+.. ..+.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 28 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 28 EGKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 45677766665 445555544 35778999987754 3444444444443 36888888875532 00
Q ss_pred -CCcccEEEEcccccCc--------ccH-----------HHHHHHHHHcccCCcEEEEEec
Q 022248 192 -DASVDAVVGTLVLCSV--------KDV-----------DMTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 -~~~~D~v~~~~~l~~~--------~~~-----------~~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-+.+|+++.+...... .+. ..+++.+.+.++.+|.++.+..
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 1468999976654322 111 1234666677777888888754
No 493
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=62.84 E-value=8.9 Score=33.07 Aligned_cols=90 Identities=16% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEc
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGT 201 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 201 (300)
...+|.=||+| .++..++. ..+.+|+++|.++..++.+.+. +. . ...+..++--.....|+|+..
T Consensus 21 ~~mkIgiIGlG--~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~----g~-----~-~~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 21 QSMQIGMIGLG--RMGADMVRRLRKGGHECVVYDLNVNAVQALERE----GI-----A-GARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp -CCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TC-----B-CCSSHHHHHHHSCSSCEEEEC
T ss_pred cCCEEEEECch--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC----CC-----E-EeCCHHHHHhcCCCCCEEEEe
Confidence 34678888876 34444433 3567999999999876665432 21 1 111222211111235888864
Q ss_pred ccccCcccHHHHHHHHHHcccCCcEEEE
Q 022248 202 LVLCSVKDVDMTLQEVRRVLKPGGIYLF 229 (300)
Q Consensus 202 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 229 (300)
--.. ..+.++..+...|++|..++-
T Consensus 89 vp~~---~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 89 VPAA---VVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp SCGG---GHHHHHHHHGGGCCTTCEEEE
T ss_pred CCHH---HHHHHHHHHHhhCCCCCEEEe
Confidence 3222 456677888888888765544
No 494
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=62.55 E-value=8.3 Score=31.04 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=45.8
Q ss_pred CeEEEECCCC-C-hhHHHhHhCCCc----eEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEE
Q 022248 127 KKVLEIGIGT-G-PNLKYYAADTDV----QVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVG 200 (300)
Q Consensus 127 ~~vLDiGcG~-G-~~~~~l~~~~~~----~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 200 (300)
.+|.=||+|. | .++..+.+ .+. +++++|.+++.++.+.+.. + +.. ..+..+. -...|+|+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~-~g~~~~~~V~~~~r~~~~~~~~~~~~---g-----~~~-~~~~~e~---~~~aDvVil 69 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN-KNIVSSNQIICSDLNTANLKNASEKY---G-----LTT-TTDNNEV---AKNADILIL 69 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTSSCGGGEEEECSCHHHHHHHHHHH---C-----CEE-CSCHHHH---HHHCSEEEE
T ss_pred CeEEEECccHHHHHHHHHHHh-CCCCCCCeEEEEeCCHHHHHHHHHHh---C-----CEE-eCChHHH---HHhCCEEEE
Confidence 3677788763 2 22333333 344 8999999998776665432 2 222 1121111 124788886
Q ss_pred cccccCcccHHHHHHHHHHcccCCcEEE
Q 022248 201 TLVLCSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 201 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
.- .......+++++...++||..++
T Consensus 70 av---~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 70 SI---KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp CS---CTTTHHHHC---CCSSCTTCEEE
T ss_pred Ee---CHHHHHHHHHHHHhhcCCCCEEE
Confidence 44 22345566777777777776544
No 495
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=62.52 E-value=26 Score=28.71 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=48.5
Q ss_pred CeEEEECC-CC-C-hhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccc
Q 022248 127 KKVLEIGI-GT-G-PNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLV 203 (300)
Q Consensus 127 ~~vLDiGc-G~-G-~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 203 (300)
.+|.=||+ |. | .++..+. ..+.+++++|.++..++.+.+ .++. + .+..+. -...|+|+..--
T Consensus 12 m~I~iIG~tG~mG~~la~~l~-~~g~~V~~~~r~~~~~~~~~~----~g~~---~----~~~~~~---~~~aDvVi~av~ 76 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH-DSAHHLAAIEIAPEGRDRLQG----MGIP---L----TDGDGW---IDEADVVVLALP 76 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HSSSEEEEECCSHHHHHHHHH----TTCC---C----CCSSGG---GGTCSEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHh----cCCC---c----CCHHHH---hcCCCEEEEcCC
Confidence 47888988 63 2 2233333 345689999999887666543 2321 1 122111 135799886432
Q ss_pred ccCcccHHHHHHHHHHcccCCcEEE
Q 022248 204 LCSVKDVDMTLQEVRRVLKPGGIYL 228 (300)
Q Consensus 204 l~~~~~~~~~l~~~~~~LkpgG~l~ 228 (300)
.. ....+++++...++||..++
T Consensus 77 ~~---~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 77 DN---IIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred ch---HHHHHHHHHHHhCCCCCEEE
Confidence 21 24566777777787776544
No 496
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=62.29 E-value=9.5 Score=31.03 Aligned_cols=102 Identities=16% Similarity=0.164 Sum_probs=60.0
Q ss_pred CCCeEEEECC-CCChhHHHhHh---CCCceEEEEcCCHHH-HHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC---
Q 022248 125 KAKKVLEIGI-GTGPNLKYYAA---DTDVQVLGVDPNRKM-EKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS--- 191 (300)
Q Consensus 125 ~~~~vLDiGc-G~G~~~~~l~~---~~~~~~~giD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 191 (300)
.++++|=.|+ |+|.++..+++ ..+.+|+.+|.++.. ++...+ ..+ .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~---~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLP---AKAPLLELDVQNEEHLASLAGRVT 79 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSS---SCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---hcC---CCceEEEccCCCHHHHHHHHHHHH
Confidence 4678888887 35556666654 357799999987643 222221 111 35677888876532 00
Q ss_pred --CC---cccEEEEcccccC--------c-----ccHH-----------HHHHHHHHcccCCcEEEEEec
Q 022248 192 --DA---SVDAVVGTLVLCS--------V-----KDVD-----------MTLQEVRRVLKPGGIYLFVEH 232 (300)
Q Consensus 192 --~~---~~D~v~~~~~l~~--------~-----~~~~-----------~~l~~~~~~LkpgG~l~~~~~ 232 (300)
-+ .+|+++.+..... + .+.+ .+.+.+...++++|.++.+..
T Consensus 80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss 149 (269)
T 2h7i_A 80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDF 149 (269)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcC
Confidence 12 7999997665432 1 1111 234566666677788888764
No 497
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=62.28 E-value=40 Score=26.65 Aligned_cols=76 Identities=14% Similarity=-0.039 Sum_probs=50.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCC-----CC-----
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIP-----VS----- 191 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 191 (300)
.+++||=.|+ +|.++..+++ ..+.+|+++|.++..++...+.++..+ .++.++.+|+.+.. +.
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5567776664 5556666654 357799999999887766665555443 36888888886532 10
Q ss_pred CCcccEEEEcccc
Q 022248 192 DASVDAVVGTLVL 204 (300)
Q Consensus 192 ~~~~D~v~~~~~l 204 (300)
-+.+|+|+.+...
T Consensus 86 ~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 86 LGKVDILVNNAGG 98 (255)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1368999976543
No 498
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=62.19 E-value=60 Score=26.07 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=52.0
Q ss_pred CCCeEEEECCCCChhHHHhHh---CCCceEEEEcCCHHHHHHHHHHHHH-cCCCCCCEEEEecccCcCCC----------
Q 022248 125 KAKKVLEIGIGTGPNLKYYAA---DTDVQVLGVDPNRKMEKYAQTAAVA-AGLPLTNFKFLQAVGEAIPV---------- 190 (300)
Q Consensus 125 ~~~~vLDiGcG~G~~~~~l~~---~~~~~~~giD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~d~~~~~~---------- 190 (300)
.++++|=.|++.| ++..+++ ..+.+|+.+|.+...++.+.+.+.. .+ .++.++.+|+.+...
T Consensus 19 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 19 DGKRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG---TDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 5667777776554 4444443 3577999999999888877766654 33 378899999876431
Q ss_pred CCCcccEEEEccccc
Q 022248 191 SDASVDAVVGTLVLC 205 (300)
Q Consensus 191 ~~~~~D~v~~~~~l~ 205 (300)
.-+..|+++.+....
T Consensus 95 ~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 95 AFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHTSCSEEEEECCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 014789999765443
No 499
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=61.97 E-value=8.8 Score=34.20 Aligned_cols=89 Identities=19% Similarity=0.094 Sum_probs=48.5
Q ss_pred CCCCeEEEECCCC-ChhHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEcc
Q 022248 124 GKAKKVLEIGIGT-GPNLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTL 202 (300)
Q Consensus 124 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 202 (300)
..+++|+=+|+|. |......++..+.+|+++|.++.....+.. .+ +.+ .+++++- ...|+|+...
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~----~G-----~~v--v~LeElL---~~ADIVv~at 310 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAM----DG-----FEV--VTLDDAA---STADIVVTTT 310 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----TT-----CEE--CCHHHHG---GGCSEEEECC
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHh----cC-----cee--ccHHHHH---hhCCEEEECC
Confidence 4788999999874 443444444578899999998864433321 22 222 1222211 2467776533
Q ss_pred cccCcccHHHHHHHHHHcccCCcEEEEEe
Q 022248 203 VLCSVKDVDMTLQEVRRVLKPGGIYLFVE 231 (300)
Q Consensus 203 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 231 (300)
.-.++ +-.+....+|||++++-+.
T Consensus 311 gt~~l-----I~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 311 GNKDV-----ITIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp SSSSS-----BCHHHHHHSCTTEEEEECS
T ss_pred CCccc-----cCHHHHhcCCCCeEEEEcC
Confidence 22222 1144555667777665543
No 500
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=61.88 E-value=27 Score=28.44 Aligned_cols=85 Identities=16% Similarity=0.040 Sum_probs=47.6
Q ss_pred eEEEECCCC-Ch-hHHHhHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCCCCEEEEecccCcCCCCCCcccEEEEccccc
Q 022248 128 KVLEIGIGT-GP-NLKYYAADTDVQVLGVDPNRKMEKYAQTAAVAAGLPLTNFKFLQAVGEAIPVSDASVDAVVGTLVLC 205 (300)
Q Consensus 128 ~vLDiGcG~-G~-~~~~l~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 205 (300)
+|.=||+|. |. ++..++ . +.+++++|.++...+.+.+. +. . ... ..+. -...|+|+..--..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~~~~~~~----g~---~--~~~--~~~~---~~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKALRHQEE----FG---S--EAV--PLER---VAEARVIFTCLPTT 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHHHHHHHH----HC---C--EEC--CGGG---GGGCSEEEECCSSH
T ss_pred eEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHHHHHHHC----CC---c--ccC--HHHH---HhCCCEEEEeCCCh
Confidence 577788875 22 233333 4 77899999998776665443 22 1 111 1111 13579888643111
Q ss_pred CcccHHHHHHHHHHcccCCcEEEEE
Q 022248 206 SVKDVDMTLQEVRRVLKPGGIYLFV 230 (300)
Q Consensus 206 ~~~~~~~~l~~~~~~LkpgG~l~~~ 230 (300)
.....+++++...+++|..++..
T Consensus 67 --~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 67 --REVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp --HHHHHHHHHHTTTCCTTEEEEEC
T ss_pred --HHHHHHHHHHHhhCCCCCEEEEC
Confidence 12344567777778887655543
Done!