Your job contains 1 sequence.
>022250
MATLGCQFHCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG
MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVY
DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS
FHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRV
HSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022250
(300 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173043 - symbol:CRR1 "chlororespiration reduc... 1176 1.8e-119 1
TIGR_CMR|CBU_1709 - symbol:CBU_1709 "dihydrodipicolinate ... 299 2.9e-29 2
TIGR_CMR|DET_0971 - symbol:DET_0971 "dihydrodipicolinate ... 292 8.4e-26 1
TIGR_CMR|CHY_1151 - symbol:CHY_1151 "dihydrodipicolinate ... 283 7.6e-25 1
UNIPROTKB|P63895 - symbol:dapB "4-hydroxy-tetrahydrodipic... 268 2.9e-23 1
TIGR_CMR|BA_1555 - symbol:BA_1555 "dihydrodipicolinate re... 264 7.8e-23 1
UNIPROTKB|P72024 - symbol:dapB "4-hydroxy-tetrahydrodipic... 222 2.2e-18 1
TIGR_CMR|GSU_0160 - symbol:GSU_0160 "dihydrodipicolinate ... 128 7.0e-06 1
TAIR|locus:2051854 - symbol:AT2G44040 species:3702 "Arabi... 128 1.3e-05 1
TIGR_CMR|SO_1140 - symbol:SO_1140 "dihydrodipicolinate re... 120 6.2e-05 1
TAIR|locus:2080482 - symbol:AT3G59890 species:3702 "Arabi... 114 0.00052 1
TIGR_CMR|SPO_3834 - symbol:SPO_3834 "dihydrodipicolinate ... 111 0.00067 1
>TAIR|locus:2173043 [details] [associations]
symbol:CRR1 "chlororespiration reduction 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008839 "4-hydroxy-tetrahydrodipicolinate
reductase" evidence=IEA;IGI;ISS] [GO:0009089 "lysine biosynthetic
process via diaminopimelate" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0070402 "NADPH binding" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0019684
"photosynthesis, light reaction" evidence=IMP] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173
PIRSF:PIRSF000161 UniPathway:UPA00034 InterPro:IPR016040
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
Gene3D:3.40.50.720 GO:GO:0016491 GO:GO:0070402 GO:GO:0009089
GO:GO:0019877 EMBL:AB015478 eggNOG:COG0289 KO:K00215
PANTHER:PTHR20836 EMBL:AY084406 EMBL:BT030092 IPI:IPI00522022
RefSeq:NP_200023.1 UniGene:At.29638 HSSP:P72024
ProteinModelPortal:Q9FJ82 SMR:Q9FJ82 STRING:Q9FJ82 PaxDb:Q9FJ82
PRIDE:Q9FJ82 EnsemblPlants:AT5G52100.1 GeneID:835286
KEGG:ath:AT5G52100 TAIR:At5g52100 HOGENOM:HOG000227154
InParanoid:Q9FJ82 OMA:IHVHAVR PhylomeDB:Q9FJ82
ProtClustDB:CLSN2687455 Genevestigator:Q9FJ82 GO:GO:0019684
TIGRFAMs:TIGR00036 Uniprot:Q9FJ82
Length = 298
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 231/294 (78%), Positives = 261/294 (88%)
Query: 9 HCRMHHISQNVKAKR-FISCSTNPP-QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66
+C +S+++K R SCS + P Q+NIKVIINGA KEIGRAAV+AVTKARGME+AGA
Sbjct: 5 NCHFFQLSRHLKPSRPSFSCSASQPSQNNIKVIINGAAKEIGRAAVVAVTKARGMELAGA 64
Query: 67 IDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQA 126
+D+H VGEDIG++CDME+PLEIPV+SDLTMVLGSISQ K VVIDFTD STVY+NVKQA
Sbjct: 65 VDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQA 124
Query: 127 TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNV 186
TAFGM+SVVYVP I+ ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NV
Sbjct: 125 TAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNV 184
Query: 187 EIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLP 246
E+VESRPNA D PSP+A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGVRVHSMVLP
Sbjct: 185 ELVESRPNAADLPSPEAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGVRVHSMVLP 244
Query: 247 GLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GLPSST VYFS PG+VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEKFL
Sbjct: 245 GLPSSTQVYFSSPGDVYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEKFL 298
>TIGR_CMR|CBU_1709 [details] [associations]
symbol:CBU_1709 "dihydrodipicolinate reductase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154 OMA:IHVHAVR
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 EMBL:M74242 PIR:B44791
RefSeq:NP_820690.1 ProteinModelPortal:P24703 PRIDE:P24703
GeneID:1209620 KEGG:cbu:CBU_1709 PATRIC:17932153
BioCyc:CBUR227377:GJ7S-1681-MONOMER Uniprot:P24703
Length = 239
Score = 299 (110.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 75/222 (33%), Positives = 120/222 (54%)
Query: 88 IPVMSDLTMVLGSISQSK-ARA-------VVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q A+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 198
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 199 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 258
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 259 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
Score = 41 (19.5 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGME-VAG 65
I VIING ++GR +T +E V+G
Sbjct: 3 INVIINGINGKMGRVVKENITAQSDLELVSG 33
>TIGR_CMR|DET_0971 [details] [associations]
symbol:DET_0971 "dihydrodipicolinate reductase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 OMA:RLHSVRL
RefSeq:YP_181694.1 ProteinModelPortal:Q3Z7V5 STRING:Q3Z7V5
GeneID:3229677 KEGG:det:DET0971 PATRIC:21608991
BioCyc:DETH243164:GJNF-972-MONOMER Uniprot:Q3Z7V5
Length = 263
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 78/268 (29%), Positives = 136/268 (50%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IKV+++GA ++G+ + + + + GA+D + + + + IP +DL+
Sbjct: 4 IKVVVHGASGKMGQEVLKTLCQENNLLPVGAVDIRAKSPALPLP---DGSGSIPYSADLS 60
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
VL SQ+K V++DFT A ++ A A + V+ E +S +
Sbjct: 61 SVL---SQTKPD-VMVDFTIAKASMPAIRIAAAHKVNLVIGTTGFSPEEISEIEQLAKTN 116
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNLSNL-- 213
+G ++AP ++G+I++ A AS + E++E + + SP T +A + L
Sbjct: 117 DIGIIVAPNFALGAIIMVHLAQEASRFLASAEVIELHHDKK-LDSPSGTALATAAAMLKT 175
Query: 214 -GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDV 272
G+ +N+ ARGQ DG+RVHS+ LPGL + V F G+ +I+HD
Sbjct: 176 RGEAFNKPAKENMSDARGQE--HDGIRVHSVRLPGLLAHQEVIFGAAGQSLTIRHDAFSR 233
Query: 273 QSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ MPG++LAI+++V K V+GL+K L
Sbjct: 234 ECYMPGVVLAIKEIVQTKGFVFGLDKLL 261
>TIGR_CMR|CHY_1151 [details] [associations]
symbol:CHY_1151 "dihydrodipicolinate reductase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=ISS] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:YP_359996.1
ProteinModelPortal:Q3ACY8 STRING:Q3ACY8 GeneID:3727402
KEGG:chy:CHY_1151 PATRIC:21275442 OMA:RLHSVRL
BioCyc:CHYD246194:GJCN-1150-MONOMER Uniprot:Q3ACY8
Length = 263
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 76/267 (28%), Positives = 141/267 (52%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM 96
++++ GA ++GR + E+ G +D +VG+D G + + + L V +L
Sbjct: 3 RIVMLGACGKMGREISKNLLMHSEHELVGFVDVVNVGQDFGEILGISR-LGKTVEDNLKE 61
Query: 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156
V+ + +V+DF+ AS + N+ A +R V E + + + +
Sbjct: 62 VILKTNPE----IVLDFSRASGAFTNILIALENKVRVVSGTTGFSQEQIKKIEDVSNANN 117
Query: 157 MGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQ 215
+GC+IAP SIG++LL + A A+ ++ +VEI+E N + D PS A + A LS++ +
Sbjct: 118 LGCIIAPNFSIGALLLMKLAQMAAKYFSHVEIIEYHHNLKVDAPSGTAIKTAELLSSIRE 177
Query: 216 IYNRED-ISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQ 273
N+ I + K G G+ G+++HS+ LPGL + V F G+ +++HD+ +
Sbjct: 178 --NQPSAIQEEEKIPGSRGGDYRGIKIHSVRLPGLVAHQEVIFGGRGQSLTLRHDVYSRE 235
Query: 274 SLMPGLILAIRKVVHLKNLVYGLEKFL 300
S + G++ A++KV+ L V+GL++ L
Sbjct: 236 SYLDGILFALKKVLELDRFVFGLDELL 262
>UNIPROTKB|P63895 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 PIR:A95181 RefSeq:NP_346002.1
ProteinModelPortal:P63895 EnsemblBacteria:EBSTRT00000026496
GeneID:931285 KEGG:spn:SP_1555 PATRIC:19707539 Uniprot:P63895
Length = 255
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 85/271 (31%), Positives = 130/271 (47%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVCDMEQPLEIPVMSD 93
+I+VII G ++G+AA V +++ +D S E G IPV D
Sbjct: 2 SIRVIIAGFKGKMGQAACQMVLTDPDLDLVAVLDPFESESEWQG----------IPVFKD 51
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
+ G + V +DFT + Y+N + A G VV E ++ L F
Sbjct: 52 KADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAELKEFSR 106
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSN 212
+G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A + A ++
Sbjct: 107 AQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKTAELMAE 166
Query: 213 LGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
+ + + ++ ARG DG+R+HS+ LPGL + V F GE +++HD
Sbjct: 167 VRESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGNQGEGLTLRHDS 224
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D S M G+ L I++VV LVYGLE L
Sbjct: 225 YDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>TIGR_CMR|BA_1555 [details] [associations]
symbol:BA_1555 "dihydrodipicolinate reductase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:NP_844005.1
RefSeq:YP_018177.1 RefSeq:YP_027711.1 ProteinModelPortal:Q81SU0
DNASU:1086847 EnsemblBacteria:EBBACT00000009988
EnsemblBacteria:EBBACT00000018736 EnsemblBacteria:EBBACT00000020843
GeneID:1086847 GeneID:2815987 GeneID:2851184 KEGG:ban:BA_1555
KEGG:bar:GBAA_1555 KEGG:bat:BAS1442 OMA:IVMAPNM
ProtClustDB:PRK00048 BioCyc:BANT260799:GJAJ-1516-MONOMER
BioCyc:BANT261594:GJ7F-1579-MONOMER Uniprot:Q81SU0
Length = 266
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 77/270 (28%), Positives = 136/270 (50%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KVII G +G AV+ + + + A+D GE I + M L+ + +DL
Sbjct: 4 MKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGMPA-LDATIYADLH 62
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 63 TCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTETAKEK 118
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQ----IANNL 210
++G +IAP +IG++L+ + + A+ ++++VE++E + + D PS A + I N
Sbjct: 119 AVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIELHHDQKLDAPSGTAVKTVELIRQNR 178
Query: 211 SNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDIT 270
+ Q + E + ARG + DG+ +HS+ LPGL + V F G++ +++HD
Sbjct: 179 ESKQQGHPNE-VEQLEGARGANV--DGIHIHSVRLPGLIAHQEVMFGGDGQMLTVRHDSF 235
Query: 271 DVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ S M G+ L+I V++L +LVYGLE +
Sbjct: 236 NRASFMSGVKLSIETVMNLDHLVYGLENII 265
>UNIPROTKB|P72024 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=IDA] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=IDA] [GO:0019877 "diaminopimelate
biosynthetic process" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051289 "protein
homotetramerization" evidence=IPI] [GO:0070402 "NADPH binding"
evidence=IDA] [GO:0070404 "NADH binding" evidence=IDA]
HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005886 GO:GO:0005737
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 Gene3D:3.40.50.720
GO:GO:0051289 GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
GO:GO:0070404 eggNOG:COG0289 KO:K00215 GO:GO:0008839
PANTHER:PTHR20836 HOGENOM:HOG000227154 TIGRFAMs:TIGR00036
OMA:IVMAPNM ProtClustDB:PRK00048 EMBL:U66101 PIR:D70882
RefSeq:NP_217289.1 RefSeq:NP_337348.1 RefSeq:YP_006516219.1
PDB:1C3V PDB:1P9L PDB:1YL5 PDB:1YL6 PDB:1YL7 PDBsum:1C3V
PDBsum:1P9L PDBsum:1YL5 PDBsum:1YL6 PDBsum:1YL7
ProteinModelPortal:P72024 SMR:P72024 PRIDE:P72024
EnsemblBacteria:EBMYCT00000002217 EnsemblBacteria:EBMYCT00000071917
GeneID:13317558 GeneID:888443 GeneID:925445 KEGG:mtc:MT2843
KEGG:mtu:Rv2773c KEGG:mtv:RVBD_2773c PATRIC:18128004
TubercuList:Rv2773c EvolutionaryTrace:P72024 Uniprot:P72024
Length = 245
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 63/197 (31%), Positives = 98/197 (49%)
Query: 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFC-DKASMGCLIAPTLSI 167
VVIDFT V N++ G+ +VV E + ++ K + LIAP +I
Sbjct: 48 VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAI 107
Query: 168 GSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL--GQIYNREDIST 224
G++L A A+ + + E++E P+ D PS A + A ++ G N + ST
Sbjct: 108 GAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATST 167
Query: 225 DVK-ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAI 283
+ ARG + DG+ VH++ L GL + V F GE +I+HD D S +PG++LA+
Sbjct: 168 SLPGARGADV--DGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAV 225
Query: 284 RKVVHLKNLVYGLEKFL 300
R++ L GLE L
Sbjct: 226 RRIAERPGLTVGLEPLL 242
>TIGR_CMR|GSU_0160 [details] [associations]
symbol:GSU_0160 "dihydrodipicolinate reductase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 HOGENOM:HOG000227153 RefSeq:NP_951222.1
ProteinModelPortal:Q74GT5 GeneID:2687940 KEGG:gsu:GSU0160
PATRIC:22023068 BioCyc:GSUL243231:GH27-202-MONOMER Uniprot:Q74GT5
Length = 266
Score = 128 (50.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 67/276 (24%), Positives = 124/276 (44%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAID--SHS-VGEDIGMVCDMEQPLEIPVMSD 93
K+ + GA +G+ ++A +A G ++GA++ H VG+D G++ L + + D
Sbjct: 3 KIAVCGAAGRMGQRIIVAAREA-GCTISGALERPGHEMVGQDAGLIAGCGA-LGVAISDD 60
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L V+ V+IDFT N+ + A +S+V AL+
Sbjct: 61 LNAVVEGCD------VLIDFTTPKVSLKNL-EVCALKKKSIVIGSTGFTPEERALAVELA 113
Query: 154 KASMGCLIAPTLSIG-SI---LLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIAN 208
+ + ++AP +S+G ++ +L+ A + + +VEIVE N + D PS A ++
Sbjct: 114 R-EIPAVLAPNMSVGVNVCFKILKDVAKTLGDDF-DVEIVELHHNKKKDAPSGTAVRMGE 171
Query: 209 NLSN-LGQIYNREDISTDVKARGQVLGE---DGVRVHSMVLPGLPSSTTVYFSRPGEVYS 264
++ LG+ YN+ ++T R + GE + + + ++ + TVYF GE
Sbjct: 172 VVAEALGRDYNK--VAT--YHREGICGERTKEEIGMQTVRGGDIVGEHTVYFIGMGERIE 227
Query: 265 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
I H G + A + VV +Y ++ L
Sbjct: 228 ISHRAMTRDMFSRGSVRAAQWVVGKAPGLYDMQDVL 263
>TAIR|locus:2051854 [details] [associations]
symbol:AT2G44040 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA;IDA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
"NADPH binding" evidence=IEA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009570 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.40.50.720 GO:GO:0070402
GO:GO:0009089 GO:GO:0019877 EMBL:AC004005 EMBL:BT008540
EMBL:AY084299 EMBL:AK118845 IPI:IPI00545380 PIR:T00684
RefSeq:NP_566006.1 UniGene:At.36804 ProteinModelPortal:O80574
SMR:O80574 IntAct:O80574 STRING:O80574 PaxDb:O80574 PRIDE:O80574
EnsemblPlants:AT2G44040.1 GeneID:819009 KEGG:ath:AT2G44040
TAIR:At2g44040 eggNOG:COG0289 HOGENOM:HOG000265601
InParanoid:O80574 KO:K00215 OMA:NTFDVLD PhylomeDB:O80574
ProtClustDB:PLN02775 Genevestigator:O80574 GO:GO:0008839
PANTHER:PTHR20836 TIGRFAMs:TIGR02130 Uniprot:O80574
Length = 347
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/238 (25%), Positives = 107/238 (44%)
Query: 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGM---VCDMEQPLEI 88
P + I +++NG ++G+A + A A G+ + I S GED G VC E +
Sbjct: 69 PGNGISIMVNGCSGKMGKAVIKAADSA-GVNIV-PISFGSAGED-GQRVEVCGKEITVHG 125
Query: 89 PVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP---HIQL-ET 144
P ++ VL S+ + +V+D+T S V DN + + G+ V+ +L ET
Sbjct: 126 P--TEREKVLSSVFEKHPELIVVDYTIPSAVNDNAELYSKVGVPFVMGTTGGDRNKLYET 183
Query: 145 VSALSAFCD-KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDA 203
V + MG + L+ I+ +Q +F +++++ES ++ S A
Sbjct: 184 VEEAKIYAVISPQMGKQVVAFLAAMEIMAEQ--FPGAFSGYSLDVMESHQASKLDASGTA 241
Query: 204 TQIANNLSNLGQIYNREDIST--DVKARGQVLG--EDGVRVHSMVLPGLPS-STTVYF 256
+ + LG Y+ + I D K + +++G E+ + H+ L L S TV F
Sbjct: 242 KAVISCFQELGVSYDMDQIQLIRDPKQQVEMVGVPEEHISGHAFHLYHLTSPDETVSF 299
>TIGR_CMR|SO_1140 [details] [associations]
symbol:SO_1140 "dihydrodipicolinate reductase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 HOGENOM:HOG000227153 RefSeq:NP_716765.2
ProteinModelPortal:Q8EHS7 SMR:Q8EHS7 GeneID:1168970
KEGG:son:SO_1140 PATRIC:23521922 Uniprot:Q8EHS7
Length = 270
Score = 120 (47.3 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 71/283 (25%), Positives = 124/283 (43%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID---SHSVGEDIGMVCDMEQPLEIPVMS 92
++V I GA +GR + + + + AI+ S VG D G + + + L I +M
Sbjct: 5 VRVAIVGAGGRMGRTLIESAYHQEHIRLGAAIERPGSSLVGVDAGELAGVGK-LNIMIMD 63
Query: 93 DLTMVLGSISQSKARAVVIDFT--DASTVYDN--VKQATAFGMRSVVYVPHIQLETVSAL 148
L V+IDFT +AS V+ + V+ A + + + H Q E ++A
Sbjct: 64 SLDYATDDFD------VLIDFTAPEASIVHLDWCVRHKKAMVIGTTGF-NHAQKEQINA- 115
Query: 149 SAFCDKASMGCLIAPTLSIGSIL---LQQAAISASFHYKNVEIVESRPN-ARDFPSPDAT 204
F ++ + ++AP +S+G L L + A Y ++EI+E +D PS A
Sbjct: 116 --FAEQTPV--VMAPNMSVGVNLMWKLLELAAEVMGDYTDIEIIEGHHRYKKDAPSGTAL 171
Query: 205 QIANNLSN-LGQ------IYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFS 257
++ ++ LG+ +Y RE I T + R + +G VR +V T F+
Sbjct: 172 KMGEVIAKTLGRDLEKCAVYGREGI-TGERDR-ETIGFATVRAGDLV-----GEHTAMFA 224
Query: 258 RPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE I H + + G + A +V K +Y +++ L
Sbjct: 225 DIGERLEITHKASSRMTFANGAMRAAHWLVEQKPGLYDMQQVL 267
>TAIR|locus:2080482 [details] [associations]
symbol:AT3G59890 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=IEA;IGI;ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0070402
"NADPH binding" evidence=IEA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR011859 InterPro:IPR022663 Pfam:PF01113 Pfam:PF05173
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:3.40.50.720 GO:GO:0070402
GO:GO:0009089 GO:GO:0019877 EMBL:AL138647 eggNOG:COG0289
HOGENOM:HOG000265601 KO:K00215 ProtClustDB:PLN02775 GO:GO:0008839
PANTHER:PTHR20836 TIGRFAMs:TIGR02130 EMBL:AY087505 EMBL:BT026511
IPI:IPI00521803 IPI:IPI00523614 PIR:T47813 RefSeq:NP_567088.1
RefSeq:NP_974464.1 UniGene:At.34540 ProteinModelPortal:Q8LB01
SMR:Q8LB01 STRING:Q8LB01 PaxDb:Q8LB01 PRIDE:Q8LB01
EnsemblPlants:AT3G59890.1 GeneID:825159 KEGG:ath:AT3G59890
TAIR:At3g59890 InParanoid:Q8LB01 OMA:VVDYTVP PhylomeDB:Q8LB01
Genevestigator:Q8LB01 Uniprot:Q8LB01
Length = 349
Score = 114 (45.2 bits), Expect = 0.00052, P = 0.00052
Identities = 55/240 (22%), Positives = 108/240 (45%)
Query: 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVA----GAIDSHSVGEDIGMVCDMEQPLE 87
P + I +++NG ++G+A + A A G+ + G+++ G+ + VC E +
Sbjct: 71 PGNGISIMVNGCSGKMGKAVIKAADSA-GVNIVPTSFGSVEE--AGQTVE-VCGKEILVH 126
Query: 88 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 147
P ++ VL S+ + +V+D+T S V DN A +G V +V +
Sbjct: 127 GP--TEREKVLSSVFEKYPELIVVDYTIPSAVNDN---AELYGKVGVPFVMGTTGGDRTR 181
Query: 148 LSAFCDKASMGCLIAPTLS------IGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 201
L +++ + +I+P + + ++ + +F ++E++ES ++ S
Sbjct: 182 LYKTVEESKIYAVISPQMGKQVVAFLAAMEIMSEQFPGAFAGYSLEVMESHQASKLDASG 241
Query: 202 DATQIANNLSNLGQIYNREDIST--DVKARGQVLG--EDGVRVHSMVLPGLPS-STTVYF 256
A + + LG Y+ + I D K + +V+G E+ V H+ L L S TV F
Sbjct: 242 TAKAVISCFQKLGVSYDMDQIQLIRDPKQQIEVVGVPEEHVSGHAFHLYHLTSPDKTVSF 301
>TIGR_CMR|SPO_3834 [details] [associations]
symbol:SPO_3834 "dihydrodipicolinate reductase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 TIGRFAMs:TIGR00036
ProtClustDB:PRK00048 HOGENOM:HOG000227153 RefSeq:YP_169022.1
ProteinModelPortal:Q5LLT7 GeneID:3196359 KEGG:sil:SPO3834
PATRIC:23381171 OMA:IAFCVAN Uniprot:Q5LLT7
Length = 269
Score = 111 (44.1 bits), Expect = 0.00067, P = 0.00067
Identities = 57/244 (23%), Positives = 108/244 (44%)
Query: 38 VIINGAVKEIGRAAVIAVTKARGMEVAGAID--SHS-VGEDIGMVCDMEQPLEIPVMSDL 94
++I GA +G+ V VT + + + GA++ H +G D+G Q L + V D
Sbjct: 7 IVITGASGRMGQMLVRTVTDSDKVRLVGALERPGHDWIGRDVGEAMG-GQALGVAVTDD- 64
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + +Q++A VIDFT + A V+ + E ++AL
Sbjct: 65 --PLEAFAQAQA---VIDFTAPAATLGFAALAAQARCVHVIGTTGMTAEQIAALEPAARH 119
Query: 155 ASMGCLIAPTLSIGSILLQQAA--ISASFHYK-NVEIVESRPNAR-DFPSPDATQIANNL 210
A + + A +S+G LL Q ++A+ ++E++E+ + + D PS A +
Sbjct: 120 AVI--VRAGNMSLGVNLLVQLTKKVAAALDEDFDIEVIEAHHHHKVDAPSGTALMLGEAA 177
Query: 211 SNLGQIYNREDISTDVKARGQVLG---EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
+ G+ +D++ +AR + G + H++ + V F+ PGE ++H
Sbjct: 178 AE-GRGVRLDDVAD--RARDGITGARTRGDIGFHAIRGGDIVGEHDVLFAAPGERIVLRH 234
Query: 268 DITD 271
+D
Sbjct: 235 VASD 238
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 300 300 0.00095 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 574 (61 KB)
Total size of DFA: 175 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.08u 0.13s 22.21t Elapsed: 00:00:01
Total cpu time: 22.08u 0.13s 22.21t Elapsed: 00:00:01
Start: Sat May 11 12:25:57 2013 End: Sat May 11 12:25:58 2013