BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022250
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJ82|DAPB3_ARATH Putative 4-hydroxy-tetrahydrodipicolinate reductase 3,
chloroplastic OS=Arabidopsis thaliana GN=DAPB3 PE=2 SV=1
Length = 298
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/302 (77%), Positives = 264/302 (87%), Gaps = 6/302 (1%)
Query: 1 MATLGCQFHCRMHHISQNVKAKR-FISCS-TNPPQSNIKVIINGAVKEIGRAAVIAVTKA 58
MA + C F +S+++K R SCS + P Q+NIKVIINGA KEIGRAAV+AVTKA
Sbjct: 1 MAAVNCHFF----QLSRHLKPSRPSFSCSASQPSQNNIKVIINGAAKEIGRAAVVAVTKA 56
Query: 59 RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDAST 118
RGME+AGA+D+H VGEDIG++CDME+PLEIPV+SDLTMVLGSISQ K VVIDFTD ST
Sbjct: 57 RGMELAGAVDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPST 116
Query: 119 VYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAIS 178
VY+NVKQATAFGM+SVVYVP I+ ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I
Sbjct: 117 VYENVKQATAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIM 176
Query: 179 ASFHYKNVEIVESRPNARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGV 238
ASFHY NVE+VESRPNA D PSP+A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGV
Sbjct: 177 ASFHYNNVELVESRPNAADLPSPEAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGV 236
Query: 239 RVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEK 298
RVHSMVLPGLPSST VYFS PG+VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEK
Sbjct: 237 RVHSMVLPGLPSSTQVYFSSPGDVYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEK 296
Query: 299 FL 300
FL
Sbjct: 297 FL 298
>sp|B8HRK9|DAPB_CYAP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=dapB PE=3 SV=1
Length = 275
Score = 224 bits (570), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/274 (45%), Positives = 176/274 (64%), Gaps = 8/274 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
Q I VI+NGA ++GR V AV +A + + GA+D + G+DIG V + PLE+P+
Sbjct: 4 QGAIPVIVNGAAGKMGREVVKAVAQAADLTLFGAVDRNPSLQGQDIGEVVGI-GPLEVPL 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL +L + +Q V++DFT ++VYDNV+ A A+G+R VV + E + L+
Sbjct: 63 LADLQSLLVAAAQEPQAGVMVDFTHPNSVYDNVRMAIAYGVRPVVGTTGLSPEQIRDLAT 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANN 209
F DKASMGCLI P SIG +LLQQAAI AS ++ +VEI+E N + D PS A Q A
Sbjct: 123 FADKASMGCLIIPNFSIGMVLLQQAAIQASQYFDHVEIIELHHNQKADAPSGTALQTAQL 182
Query: 210 LSNLGQIYNREDISTD---VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIK 266
L+ LG+ YN + ARG L E+G+R+HS+ LPGL + V F PG+VY+++
Sbjct: 183 LAELGKTYNPPAVKETEHLAGARGS-LAEEGIRIHSVRLPGLIAHQEVIFGAPGQVYTLR 241
Query: 267 HDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
HD +D MPG++LAIRKV++L+ +VYGLEK L
Sbjct: 242 HDTSDRSCYMPGVLLAIRKVMNLETVVYGLEKIL 275
>sp|Q8YU19|DAPB_NOSS1 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=dapB PE=3 SV=1
Length = 278
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 175/276 (63%), Gaps = 9/276 (3%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR V AV +A + + GAIDS G+D G + + +PLE+P+
Sbjct: 4 QAPIPVIVNGAAGKMGREVVKAVAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
+ L +LG ++ + V++DFT +VYDNV+ A A+G+R VV + + L
Sbjct: 64 TNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIA 207
+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + D PS A Q A
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAIQTA 183
Query: 208 NNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYS 264
L+ LG+ +N E+ ARG L E+G+R+HS+ LPGL + V F PG++Y+
Sbjct: 184 ELLAELGKTFNSAIVEETEKIPGARGS-LAEEGIRIHSVRLPGLIAHQEVIFGAPGQIYT 242
Query: 265 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 243 LRHDTSDRACYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|Q3MFY8|DAPB_ANAVT 4-hydroxy-tetrahydrodipicolinate reductase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=dapB PE=3 SV=1
Length = 278
Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 175/276 (63%), Gaps = 9/276 (3%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR V A+ +A + + GAIDS G+D G + + +PLE+P+
Sbjct: 4 QAPIPVIVNGAAGKMGREVVKAIAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
+ L +LG ++ + V++DFT +VYDNV+ A A+G+R VV + + L
Sbjct: 64 TNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIA 207
+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + D PS A Q A
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAIQTA 183
Query: 208 NNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYS 264
L+ LG+ +N E+ ARG + GE G+R+HS+ LPGL + V F PG++Y+
Sbjct: 184 ELLAELGKTFNSAIVEETEKIPGARGSLAGE-GIRIHSVRLPGLIAHQEVIFGAPGQIYT 242
Query: 265 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 243 LRHDTSDRACYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|Q9S3W8|DAPB_MASLA 4-hydroxy-tetrahydrodipicolinate reductase OS=Mastigocladus
laminosus GN=dapB PE=3 SV=1
Length = 278
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 175/276 (63%), Gaps = 9/276 (3%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR + AV +A M + GA+D++ G+D G V + +P E+P+
Sbjct: 4 QTPIPVIVNGAAGKMGRETIKAVVQAADMTLMGAVDTNPEYQGKDAGEVAGLNEPTEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
L +L ++ + V++DFT VYDNV+ A A+G+R VV + + + L
Sbjct: 64 TDQLEPILAYVAGERHLQPGVMVDFTHPDAVYDNVRSAIAYGIRPVVGTTGLSSKQIEQL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIA 207
+ F +KAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + D PS A Q A
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAIAASQYFDHVEIIELHHNQKADAPSGTAIQTA 183
Query: 208 NNLSNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYS 264
L+ +G+ +N+ + K ARG + GE G+R+HS+ LPGL + V F PG++Y+
Sbjct: 184 QMLAEMGKTFNQPAVKETEKLPGARGSLAGE-GIRIHSVRLPGLIAHQEVIFGAPGQIYT 242
Query: 265 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++HD +D + MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 243 LRHDTSDRTAYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|Q10YI1|DAPB_TRIEI 4-hydroxy-tetrahydrodipicolinate reductase OS=Trichodesmium
erythraeum (strain IMS101) GN=dapB PE=3 SV=1
Length = 275
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 172/274 (62%), Gaps = 8/274 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPV 90
Q++ VI+ GA ++GR + V A M + GAI+ +G+DIG + PLE+P+
Sbjct: 4 QTSTPVIVCGAAGKMGREVIKTVANASDMTLLGAIECQPEYIGQDIGELIG-SGPLEVPI 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL +L +Q K AV++DFT +VY+NV+ A A+G+R VV + E + L+
Sbjct: 63 LNDLQGILVMAAQEKQPAVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLSQEQIQDLAE 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANN 209
F +KAS+G LI P SIG +LLQQAAI+AS H+ +VEI+E N + D PS A + A
Sbjct: 123 FAEKASIGTLIIPNFSIGMVLLQQAAIAASKHFDHVEIIELHHNQKADAPSGTAIKTAQM 182
Query: 210 LSNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIK 266
LS LG+ YN ++ K ARG L E+G+R+HS+ LPGL + V F PG++Y+++
Sbjct: 183 LSELGKTYNVPNVEETEKIEGARG-CLAEEGIRIHSVRLPGLIAHQEVIFGGPGQIYTLR 241
Query: 267 HDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
HD TD MPG++LAIRKV L L+YGLEK L
Sbjct: 242 HDTTDRSCYMPGVLLAIRKVQSLTKLIYGLEKIL 275
>sp|P72642|DAPB_SYNY3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=dapB PE=3 SV=1
Length = 275
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 172/274 (62%), Gaps = 8/274 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
Q I V++NGA ++GR + AV +A +++ GA+D + G+DIG V + PLE+PV
Sbjct: 4 QDLIPVVVNGAAGKMGREVIKAVAQAPDLQLVGAVDHNPSLQGQDIGEVVGIA-PLEVPV 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL VL +Q K + V++DFT S VYDNV+ A A+G+R VV + + + L
Sbjct: 63 LADLQSVLVLATQEKIQGVMVDFTHPSGVYDNVRSAIAYGVRPVVGTTGLSEQQIQDLGD 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANN 209
F +KAS GCLIAP +IG +L+QQAA+ A ++ +VEI+E N + D PS A + A
Sbjct: 123 FAEKASTGCLIAPNFAIGVLLMQQAAVQACQYFDHVEIIELHHNQKADAPSGTAIKTAQM 182
Query: 210 LSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIK 266
L+ +G+ +N E+ T A+G LG + +HS+ LPGL + V F PG++Y+I+
Sbjct: 183 LAEMGKTFNPPAVEEKETIAGAKGG-LGPGQIPIHSIRLPGLIAHQEVLFGSPGQLYTIR 241
Query: 267 HDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
HD TD MPG++L IRKVV LK LVYGLEK L
Sbjct: 242 HDTTDRACYMPGVLLGIRKVVELKGLVYGLEKLL 275
>sp|B2J0A9|DAPB_NOSP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=dapB PE=3 SV=1
Length = 278
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 175/277 (63%), Gaps = 11/277 (3%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV---GEDIGMVCDMEQPLEIP 89
Q+ I VI+NGA ++GR + AV +A + + GAID HS+ +D G + + +PLE+P
Sbjct: 4 QAPIPVIVNGAAGKMGREVIKAVAQAPDLNLVGAID-HSLEHQDKDAGELAGLSEPLEVP 62
Query: 90 VMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 147
+ + L +LG ++ + V++DFT +VYDN++ A A+G+R VV + E +
Sbjct: 63 ITNQLEPMLGYVAGDRQSPPGVIVDFTHPDSVYDNIRSAIAYGIRPVVGTTGLSPEQIQD 122
Query: 148 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQI 206
L+ F DKAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + D PS A Q
Sbjct: 123 LADFADKASTGCLIIPNFSIGMVLLQQAAIAASKYFDHVEIIELHHNQKADAPSGTAIQT 182
Query: 207 ANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVY 263
A L LG+ +N E+ ARG + ++G+R+HS+ LPGL + V F G++Y
Sbjct: 183 AQLLGELGKTFNPALVEETEKLPGARGSI-ADEGIRIHSVRLPGLIAHQEVIFGAAGQIY 241
Query: 264 SIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 242 TLRHDTSDRACYMPGVLLAIRKVLALKSLVYGLEKIL 278
>sp|B7KBV6|DAPB_CYAP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7424) GN=dapB PE=3 SV=1
Length = 275
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/273 (42%), Positives = 167/273 (61%), Gaps = 6/273 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
+S I V++NGA ++G+ + AV++A M + GA+D + GED G V P+E+P+
Sbjct: 4 ESPIPVVVNGAAGKMGKEVIKAVSQAEDMMLVGAVDLNPKYRGEDAGEVAGC-GPVEVPI 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
+ DL VL +Q K + V++DFT VYDN++ A A+G+R VV + E + L
Sbjct: 63 LDDLQSVLVLATQEKVQGVMVDFTHPDGVYDNIRSAIAYGVRPVVGTTGLSGEQIKDLGE 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANN 209
F +KAS GCLI P SIG ILLQQAA+ AS ++ +VEI+E N + D PS A + A
Sbjct: 123 FAEKASTGCLIVPNFSIGMILLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAIKTAEM 182
Query: 210 LSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
LS LG+ +N + RG G E+ + +HS+ LPG + V F G++Y+++H
Sbjct: 183 LSELGKSFNPAKVEETETIRGSRGGITEENIHIHSVRLPGFIAHQEVIFGSTGQIYTLRH 242
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D TD S MPG++LAIRKV LK+L+YGLEK L
Sbjct: 243 DTTDRSSFMPGVLLAIRKVTQLKSLIYGLEKIL 275
>sp|B7JW41|DAPB_CYAP8 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 8801) GN=dapB PE=3 SV=1
Length = 275
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 171/273 (62%), Gaps = 8/273 (2%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM 91
S I V++NGA ++GR V AV +A M + GA+D + G+D+G V LE+P++
Sbjct: 5 SLIPVVVNGAAGKMGREVVKAVAQAEDMMLVGAVDYNPNYRGQDVGEVAGC-GALEVPIV 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
DL +L +Q K + V++DFT +VY+NV+ A A+G+R VV + E + L+ F
Sbjct: 64 DDLQSILVLATQEKIQGVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLTEEQLKDLADF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNL 210
DKAS GCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + D PS A + A L
Sbjct: 124 ADKASTGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAIKTAQML 183
Query: 211 SNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
S LG+ YN ++ T A+G ++ +D +R+HS+ LPGL + V F GE+Y+++H
Sbjct: 184 SGLGKTYNPPMVKETETIAGAKGALV-DDNIRIHSVRLPGLIAHQEVIFGAKGEIYTLRH 242
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D +D M G++L+IRKV L++LVYGLEK L
Sbjct: 243 DTSDRSCYMAGVLLSIRKVTQLQSLVYGLEKIL 275
>sp|Q8DHH2|DAPB_THEEB 4-hydroxy-tetrahydrodipicolinate reductase OS=Thermosynechococcus
elongatus (strain BP-1) GN=dapB PE=3 SV=1
Length = 276
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 162/277 (58%), Gaps = 8/277 (2%)
Query: 27 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL 86
C + P I VI+ GA+ ++GR V AV +A + A+D VGEDIG + L
Sbjct: 5 CMSTP----ISVIVVGALGKMGREVVKAVHQAPDTALYAAVDRKQVGEDIGEALGLGT-L 59
Query: 87 EIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVS 146
EIP+ L V + +Q K V++DFT VY+NV+ A A+G+ VV + E +
Sbjct: 60 EIPISGSLQEVCVAAAQEKQPVVMVDFTHPQAVYENVRMAIAYGVYPVVGTTGLSPEQIE 119
Query: 147 ALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQ 205
L+ F DKA MG +IAP SIG +LLQ+AAI AS ++ +VEI+E N + D PS A Q
Sbjct: 120 ELAEFADKADMGAVIAPNFSIGMVLLQEAAIRASQYFDHVEIIELHHNQKADAPSGTALQ 179
Query: 206 IANNLSNLGQIYNREDI--STDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVY 263
A L+ LG+ +N + S ++ +R+HS+ LPGL + V F PG++Y
Sbjct: 180 TAQRLAELGKTFNPPQVQESEHLRGARGAFAAAEIRIHSVRLPGLIAHQEVIFGAPGQIY 239
Query: 264 SIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+++HD +D Q MPG++LAIRKV LK L+YGLEK L
Sbjct: 240 TLRHDTSDRQCYMPGVLLAIRKVRQLKRLIYGLEKLL 276
>sp|Q31LA3|DAPB_SYNE7 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus
elongatus (strain PCC 7942) GN=dapB PE=3 SV=1
Length = 273
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 165/271 (60%), Gaps = 8/271 (2%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSD 93
I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +D
Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGL-GPLEVPVTND 63
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +
Sbjct: 64 LEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAE 123
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A + A L+
Sbjct: 124 KASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTAIKTAQMLAE 183
Query: 213 LGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
LG+ +N ++ T ARG V G + +R+HS+ LPGL + V F PGE+ +++HD
Sbjct: 184 LGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGLIAHEEVIFGAPGEILTLRHDT 242
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D MPG++LA+RKV L L+YGL++ L
Sbjct: 243 MDRSCYMPGVLLAVRKVRQLTGLIYGLDRIL 273
>sp|Q5N0M4|DAPB_SYNP6 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapB
PE=3 SV=1
Length = 273
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 164/270 (60%), Gaps = 8/270 (2%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSD 93
I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +D
Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGL-GPLEVPVTND 63
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +
Sbjct: 64 LEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAE 123
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A + A L+
Sbjct: 124 KASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTAIKTAQMLAE 183
Query: 213 LGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
LG+ +N ++ T ARG V G + +R+HS+ LPGL + V F PGE+ +++HD
Sbjct: 184 LGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGLIAHEEVIFGAPGEILTLRHDT 242
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKF 299
D MPG++LA+RKV L L+YGL++
Sbjct: 243 MDRSCYMPGVLLAVRKVRQLTGLIYGLDRI 272
>sp|B1XIL4|DAPB_SYNP2 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=dapB PE=3 SV=1
Length = 275
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 166/273 (60%), Gaps = 8/273 (2%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM 91
+ I V+INGA ++GR V AV A ME+ A+D + +G+D G + +E+P++
Sbjct: 5 NKIPVVINGAGGKMGREVVKAVAGAADMEIIAAVDKNPALLGQDAGEIAGC-GAVEVPIV 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
+DL L +QSK + V++DFT S VY N + A A+G+R VV + E ++ L F
Sbjct: 64 NDLEASLVMATQSKIQGVMVDFTHPSGVYANTRAAIAYGVRPVVGTTGLSEEQINDLKEF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNL 210
+KAS G LI P SIG +LLQQA++ A+ ++ +VEI+E N + D PS A + A L
Sbjct: 124 AEKASTGALIIPNFSIGVVLLQQASLQAAKYFDHVEIIELHHNQKADAPSGTAIKTAQML 183
Query: 211 SNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
+ LG+ +N ++ + A+G V ED +R+HS+ LPGL + + F PG++Y+++H
Sbjct: 184 AELGKQFNPAEVEEKEEMPGAKGAVT-EDNIRIHSVRLPGLIAHQEMIFGAPGQIYTLRH 242
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D +D MPG++L+IRKV L LVYGLE L
Sbjct: 243 DTSDRSCYMPGVLLSIRKVTELNTLVYGLENIL 275
>sp|B0CE31|DAPB_ACAM1 4-hydroxy-tetrahydrodipicolinate reductase OS=Acaryochloris marina
(strain MBIC 11017) GN=dapB PE=3 SV=1
Length = 275
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 163/273 (59%), Gaps = 16/273 (5%)
Query: 38 VIINGAVKEIGRAAVIAVTKARGMEVAGAID------SHSVGEDIGMVCDMEQPLEIPVM 91
VI+ GA ++GR + AV +A + + A+D S GE +G+ L I +
Sbjct: 9 VIVTGAAGKMGREVIKAVVQADDLRLYAAVDRNPDVFSLDAGELVGL-----DTLNIELT 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
++L VL + +Q K V++DFT S+VY N++ A A+G+ V+ + E ++ L+ F
Sbjct: 64 NELEPVLAAAAQEKQPCVMVDFTHPSSVYSNIRSAIAYGVFPVIGTTGLSDEQMNDLTEF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNL 210
+KASMGCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + D PS A + A L
Sbjct: 124 TEKASMGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAVKTAQLL 183
Query: 211 SNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
+LG+ YN E+ ARG LG + +R+HS+ LPGL + V F PG++Y+++H
Sbjct: 184 GDLGKTYNPALVEEKEHLAGARGS-LGSENIRIHSIRLPGLIAHQEVLFGAPGQLYTLRH 242
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D +D MPG++L+IRKV L+ L YGLEK L
Sbjct: 243 DTSDRACYMPGVLLSIRKVTQLQTLSYGLEKIL 275
>sp|Q7NLC0|DAPB_GLOVI 4-hydroxy-tetrahydrodipicolinate reductase OS=Gloeobacter violaceus
(strain PCC 7421) GN=dapB PE=3 SV=1
Length = 269
Score = 188 bits (477), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 161/269 (59%), Gaps = 6/269 (2%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
I V++ G ++GR V AV A M V GA+D + ED G + + P+++ V +L
Sbjct: 3 IPVVVVGCAGKMGREVVKAVHAAPDMAVVGAVDRSHIDEDAGELAGI-GPIDVLVTDNLE 61
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+ ++Q +A V++DFT +YD V+ A A+G+R VV + E + L+ F DKA
Sbjct: 62 ITCAMVAQERAPGVMVDFTHPRGIYDRVRSAIAYGVRPVVGTTGLPPEHIEELAEFADKA 121
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLG 214
S GC++AP +IG ILLQQA + A+ ++ +VEI+E N + D PS A A ++ G
Sbjct: 122 STGCIVAPNFAIGMILLQQACLRAAEYFDHVEIIELHHNRKADAPSGTALATAQMIATTG 181
Query: 215 QIYNREDISTD---VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ +N ++S ARG + D +R+HS+ LPGL + V F G+ Y+++HD TD
Sbjct: 182 KTFNVPEVSESELVAGARGGMTPGD-IRIHSLRLPGLLAHQAVIFGGLGQSYTLRHDTTD 240
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ MPG++LAIRKV+ LK+LVYGLEK +
Sbjct: 241 RAAYMPGVLLAIRKVLGLKSLVYGLEKII 269
>sp|Q7V7D4|DAPB_PROMM 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain MIT 9313) GN=dapB PE=3 SV=1
Length = 283
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 157/287 (54%), Gaps = 20/287 (6%)
Query: 29 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH------SVGEDIGMVCDM 82
T+ P I V++ GA+ +G + AV A E+ GA+D+ +GE++G+
Sbjct: 2 TSVPPELIPVVVVGALGRMGAEVIKAVHLASDCELVGAVDTTPGKEGVEIGEELGIGV-- 59
Query: 83 EQPLEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVY 136
L++ + SD+ L S+SQS R AV++DFT S VY++ + A A+G+ V+
Sbjct: 60 ---LDVALTSDIEACLCSVSQSFHRTGPGQGAVLVDFTHPSVVYEHTRAAFAYGVHPVIG 116
Query: 137 VPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
+ + + LS F KASMG + P S+G +LLQQAA +A+ Y N E+ E N +
Sbjct: 117 TTGLSHQQLVDLSEFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDNAELTELHHNRK 176
Query: 197 -DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTT 253
D PS + A + LG+ +N ++ G G G+R+HS+ LPGL +
Sbjct: 177 ADAPSGTCIKTAEMMEELGKSFNSPEVDEHESLTGSRGGLRASGLRLHSLRLPGLVAHQE 236
Query: 254 VYFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
V F PGE Y+++HD D + MPG++L +RKV L+ LVYGLE+ +
Sbjct: 237 VMFGAPGESYTLRHDTIDRSAYMPGVLLTVRKVRQLQGLVYGLERLI 283
>sp|Q7VC38|DAPB_PROMA 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=dapB PE=3
SV=1
Length = 276
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 154/274 (56%), Gaps = 10/274 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSD 93
I V++ GA+ ++G + A+ K+ E+ AID+ + G DIG M+Q +++ V +D
Sbjct: 4 IPVLVAGALGKMGSEVIKAIYKSNDCELVAAIDNANEMEGVDIGTALGMDQ-MDVAVTAD 62
Query: 94 LTMVL----GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALS 149
L L S+ S AV+IDFT + VY++ + + A+G+ V+ + + + L
Sbjct: 63 LEGSLCVASQSVRNSSGNAVLIDFTHPNVVYEHSRASIAYGVHPVIGTTGLSIVQLEELR 122
Query: 150 AFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIAN 208
F +KAS+G I P S+G +LLQQAA +A+ Y E+ ES N + D PS + A
Sbjct: 123 EFANKASIGAAIIPNFSVGMVLLQQAAAAAASFYDYAELTESHHNQKADAPSGTCIKTAE 182
Query: 209 NLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIK 266
+ +G+ +N+ I +G G E G+R+HS+ LPG+ + V F PGE Y +
Sbjct: 183 IIEEIGKSFNKTTIKEQESIKGSRGGLRESGLRLHSVRLPGIVAQQQVLFGSPGETYLLS 242
Query: 267 HDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
H+ D + MPG++ IRKV HLK+LVYGLEK L
Sbjct: 243 HNTIDRSAYMPGVLHTIRKVRHLKSLVYGLEKIL 276
>sp|Q7V1N1|DAPB_PROMP 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapB
PE=3 SV=1
Length = 282
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 38 VIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLT 95
V+++GA+ +G V +V + E+ AID++ + GE+I + ++++ ++ V +DL
Sbjct: 11 VLVSGALGRMGSEVVNSVLNSSDCELVAAIDTNKKNNGENISQLLNLKKS-DVLVSNDLE 69
Query: 96 MVLGSISQ----SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
L SISQ K + V++DFT +VY+N + A A+G+ VV + ++ L+ F
Sbjct: 70 GSLCSISQDYRNEKIKPVLVDFTHPDSVYENTRSAIAYGISPVVGTTGLTPSQINDLAIF 129
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNL 210
KA++GC I P S+G +LLQQAA A+ Y N+E++E N + D PS + A +
Sbjct: 130 AQKANIGCAIIPNFSVGMVLLQQAASVAAKFYDNIELIEMHHNQKADSPSGTCIKTAEMI 189
Query: 211 SNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHD 268
+ YN+ + +G G + G+ +HS+ LPGL + V PGE Y+IKHD
Sbjct: 190 EEYPKKYNQSLVEESESLKGVRGGVRDSGLNIHSIRLPGLLAHQVVIMGSPGETYTIKHD 249
Query: 269 ITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D ++ MPG++ AIRK+ +L+YGLEK +
Sbjct: 250 TIDRKAYMPGVLQAIRKIGKFNSLIYGLEKLI 281
>sp|A5GSL5|DAPB_SYNR3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain RCC307) GN=dapB PE=3 SV=1
Length = 273
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 6/271 (2%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMS 92
I V++ GA+ +G + AV A ++ GAID+ GED+G+ + + LE+ +
Sbjct: 4 QIPVVVAGALGRMGAEVIKAVHTAGDCQLVGAIDTCPGREGEDVGLALGLGE-LEVALTQ 62
Query: 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFC 152
D L SQ AV++DFT VY++ + A A+G+ V+ + E + L++F
Sbjct: 63 DFEGALCLASQQHPGAVLVDFTHPKVVYEHTRAAIAYGVTPVIGTTGLAPEQLQELASFA 122
Query: 153 DKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLS 211
KASMG + P S+G +LLQQAA +A+ Y + E+VE N + D PS + A +
Sbjct: 123 AKASMGGAVIPNFSVGMVLLQQAAAAAARFYDHAELVELHHNRKADAPSGTCIKTAELME 182
Query: 212 NLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
LG+ +N +++ G G G+R+HS+ LPGL + V F GE Y ++HD
Sbjct: 183 ELGKQFNAQEVEEHETLEGSRGGLRPSGLRLHSIRLPGLVAHQEVQFGGAGERYVLRHDT 242
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D + MPG++L +RKV L LVYGLE+ L
Sbjct: 243 FDRAAYMPGVLLTVRKVRQLGALVYGLERLL 273
>sp|Q3AYN5|DAPB_SYNS9 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9902) GN=dapB PE=3 SV=1
Length = 277
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 154/276 (55%), Gaps = 10/276 (3%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVM 91
S I V++ GA+ +G + AV A ++ GAID+ G D+G+ +++ LE+ V
Sbjct: 3 SPIPVVVAGALGRMGAEVINAVVNAEDCQLVGAIDNTPGKEGTDVGLELGIKE-LEVAVT 61
Query: 92 SDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 147
+D L ++SQS AV++DFT S V+D+ + A A+G+ V+ + ++
Sbjct: 62 ADFEGCLCAVSQSVRNSDQNAVLVDFTHPSVVFDHTRAAIAYGVHPVIGTTGLSPIQLND 121
Query: 148 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQI 206
L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS +
Sbjct: 122 LTEFSAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCIKT 181
Query: 207 ANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYS 264
A + + Q +N ++ +G G + G+ +HS+ LPGL + V F PGE Y+
Sbjct: 182 AELMEEVKQSFNPAEVDEHESLQGSRGGVRDSGLNLHSLRLPGLVAHQEVMFGAPGETYT 241
Query: 265 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++HD D + MPG++L IRKV L+ LVYGLE+ +
Sbjct: 242 LRHDTIDRSAYMPGVLLTIRKVGSLQQLVYGLERLI 277
>sp|Q7U807|DAPB_SYNPX 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain WH8102) GN=dapB PE=3 SV=1
Length = 277
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 152/275 (55%), Gaps = 10/275 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMS 92
+I V++ GA+ +G + AV + + GAID+ G DI + LE+ V +
Sbjct: 4 SIPVVVAGALGRMGAEVIKAVVGSADCMLVGAIDNTPGKEGSDI-GLELGLGELEVAVTA 62
Query: 93 DLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
D L ++SQS +A AV++DFT S VY++ + A A+G+ V+ + E +S L
Sbjct: 63 DFEGCLCAVSQSVRDAEAGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLSDL 122
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIA 207
F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS + A
Sbjct: 123 CQFAAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNCKADAPSGTCIKTA 182
Query: 208 NNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEVYSI 265
+ LG+ +N ++ G G E G+R+HS+ LPGL + V F PGE Y++
Sbjct: 183 ELMEELGKSFNPAEVDEHESLAGSRGGRRESGLRLHSLRLPGLVAHQEVMFGAPGETYTL 242
Query: 266 KHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+HD D + MPG++L +RKV L+ LVYGLE+ +
Sbjct: 243 RHDTIDRSAYMPGVLLTVRKVRSLQTLVYGLERLI 277
>sp|Q3AIK8|DAPB_SYNSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9605) GN=dapB PE=3 SV=1
Length = 277
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 153/274 (55%), Gaps = 10/274 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSD 93
I V++ GA+ +G + AV A + GAID+ G D+ + LE+ V +D
Sbjct: 5 IPVVVAGALGRMGAEVIKAVVGAEDCSLVGAIDNTPGKEGADV-GLELGLGELEVAVTAD 63
Query: 94 LTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALS 149
L ++SQS + AV++DFT S VY++ + A A+G+ V+ + E ++ L+
Sbjct: 64 FEGCLCAVSQSVRDSGSGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLNDLT 123
Query: 150 AFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIAN 208
F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS + A
Sbjct: 124 EFSAKASVGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCIKTAE 183
Query: 209 NLSNLGQIYNREDISTDVKARGQVLGE--DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIK 266
+ LG+ +N E++ G G+ G+R+HS+ LPGL + V F PGE Y+++
Sbjct: 184 LMEELGKSFNPEEVDEHESLAGCRGGQRDSGLRLHSVRLPGLVAHQEVMFGAPGETYTLR 243
Query: 267 HDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
HD D + MPG++L +RKV +L +LVYGLE+ +
Sbjct: 244 HDTIDRSAYMPGVLLTVRKVGNLGSLVYGLERLI 277
>sp|Q46KV7|DAPB_PROMT 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain NATL2A) GN=dapB PE=3 SV=1
Length = 282
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 146/277 (52%), Gaps = 12/277 (4%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMS 92
+I V++ GA+ +G V A+ ++ ++ GAID+ G+DIG + + + L++ + S
Sbjct: 7 SIPVLVAGAMGRMGSEVVKAINSSKDFQLVGAIDNQKDKEGQDIGSLLGLGE-LDVFLSS 65
Query: 93 DLTMVLGSISQ------SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVS 146
D L + SQ S AV++DFT Y + + + A+G+ V+ I + +
Sbjct: 66 DFEGSLCAASQNVPKDGSNNGAVLVDFTHPKFAYKHTRTSIAYGVHPVIGTTGITADQLD 125
Query: 147 ALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQ 205
LS F DKAS+G I P S+G +LLQQAA +A+ Y+ E+ E N + D PS +
Sbjct: 126 DLSKFADKASLGSAIIPNFSVGMVLLQQAAAAAARFYEFAELTEMHHNKKADAPSGTCIK 185
Query: 206 IANNLSNLGQIYNREDISTDVKARGQVLGE--DGVRVHSMVLPGLPSSTTVYFSRPGEVY 263
A + +NR + + +G G G+R+HS+ LPGL + V F GE Y
Sbjct: 186 TAELIEEQRSNFNRSFVEEEESIKGSRGGSRASGLRLHSVRLPGLVAHQQVMFGSNGETY 245
Query: 264 SIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ H+ D + MPG++L I+K+ LVYGLEK L
Sbjct: 246 ELSHNTIDRSAYMPGVLLVIKKIRSFNKLVYGLEKIL 282
>sp|Q24UK0|DAPB_DESHY 4-hydroxy-tetrahydrodipicolinate reductase OS=Desulfitobacterium
hafniense (strain Y51) GN=dapB PE=3 SV=1
Length = 267
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD 93
I+V ++GA ++GR V + M++ GA D+ G DIG + M PL I +
Sbjct: 2 KKIRVFVSGAGGKMGREVVRTILDQEDMQLVGASDARQQGRDIGELLAM-APLGIEITGP 60
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L + + +++A +++DFT+ +V N K A A G+ V+ + +S + D
Sbjct: 61 LEVA--HLKETRAD-IMVDFTNPQSVLKNAKCALAAGVVPVLGTTGLDEADISEIRDLVD 117
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
+ +G IAP +IG+IL+ + A A+ ++ +VEI+E + + D PS A + +S
Sbjct: 118 QTKVGAFIAPNFAIGAILMMRFAQEAAKYFPHVEIIELHHDQKLDAPSGTALKTVEWISE 177
Query: 213 LGQIYNREDISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + + + K +G G+ DG+ +HS+ LPG + V F G+ +I+HD
Sbjct: 178 VRKPLVQGHPNEYEKIKGSRGGDVDGIHIHSVRLPGFIAHQEVIFGGLGQALTIRHDALS 237
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++ MPG++LA+RK L NLV GLE FL
Sbjct: 238 RETYMPGIMLAVRKASQLSNLVIGLENFL 266
>sp|B8FQZ3|DAPB_DESHD 4-hydroxy-tetrahydrodipicolinate reductase OS=Desulfitobacterium
hafniense (strain DCB-2 / DSM 10664) GN=dapB PE=3 SV=1
Length = 267
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 143/269 (53%), Gaps = 6/269 (2%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD 93
I+V ++GA ++GR V + M++ GA D+ G DIG + M PL I +
Sbjct: 2 KKIRVFVSGAGGKMGREVVRTILDQEDMQLVGASDARQQGRDIGELLAM-APLGIEITGP 60
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L + + +++A +++DFT+ +V N K A A G+ V+ + +S + D
Sbjct: 61 LEVA--HLKETRAD-IMVDFTNPQSVLKNAKCALAAGVVPVLGTTGLDEADISEIRDLVD 117
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
+ +G IAP +IG+IL+ + A A+ ++ +VEI+E + + D PS A + +S
Sbjct: 118 QTKVGAFIAPNFAIGAILMMRFAQEAAKYFPHVEIIELHHDQKLDAPSGTALKTVEWISE 177
Query: 213 LGQIYNREDISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + + + K +G G+ DG+ +HS+ LPG + V F G+ +I+HD
Sbjct: 178 VRKPLVQGHPNEYEKIKGSRGGDVDGIHIHSVRLPGFIAHQEVIFGGLGQALTIRHDALS 237
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
++ MPG++LA+RK L NLV GLE FL
Sbjct: 238 RETYMPGIMLAVRKASQLSNLVIGLENFL 266
>sp|B8DC19|DAPB_LISMH 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=dapB PE=3
SV=1
Length = 263
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETR 175
Query: 215 QIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + +++ ARG +G+R+HS+ LPGL + V F G+ +I+HD D
Sbjct: 176 EFVKQGAADEVELIEGARGSEY--EGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYD 233
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
S M G+ L++RK L+ L+YGLE L
Sbjct: 234 RISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|C1KWK7|DAPB_LISMC 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain CLIP80459) GN=dapB
PE=3 SV=1
Length = 263
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMTETR 175
Query: 215 QIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + +++ ARG +G+R+HS+ LPGL + V F G+ +I+HD D
Sbjct: 176 EFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYD 233
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
S M G+ L++RK L+ L+YGLE L
Sbjct: 234 RISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q71YA8|DAPB_LISMF 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=dapB PE=3
SV=1
Length = 263
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETR 175
Query: 215 QIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + +++ ARG +G+R+HS+ LPGL + V F G+ +I+HD D
Sbjct: 176 EFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYD 233
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
S M G+ L++RK L+ L+YGLE L
Sbjct: 234 RISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q92AA1|DAPB_LISIN 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=dapB PE=3 SV=1
Length = 263
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 13/270 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KV ++G +G V + + +E+ +D ++I + + L++PV DL+
Sbjct: 1 MKVAVSGFKGRMGHEVVKTILREEDLELVAVLDHEPKEKNIREIVEF-SSLDVPVYGDLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K +R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTIPKVGYSNTKTILEHSVRAVVGTTGFTPEQISELKSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAETR 175
Query: 215 QIYNR---EDISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDIT 270
+ + +++ ARG GE +G+R+HS+ LPGL + V F G+ +I+HD
Sbjct: 176 EFVKQGAADEVELIEGARG---GEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSY 232
Query: 271 DVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D S M G+ L++RK L+ L+YGLE L
Sbjct: 233 DRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|B6J2F3|DAPB_COXB2 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain CbuG_Q212) GN=dapB PE=3 SV=1
Length = 239
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 30/266 (11%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
I VIING +IGR V E+I D+E DL
Sbjct: 3 INVIINGINGKIGRV---------------------VKENITAQSDLELVSGTGRQDDLA 41
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+ Q+ VVIDFT +V+ N + G R V+ + LE ++ L C
Sbjct: 42 KTI----QTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTGLTLEQIALLDKQCRNK 97
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLG 214
+G ++AP S+G++L+ + A A+ ++ +VEI+E + + D PS A + A + +
Sbjct: 98 KLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDAPSGTAIKTAQMIGEMR 157
Query: 215 QIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQS 274
+++D +ARG++ ++G+ +HS+ LPGL S +V F GE +I+HD D
Sbjct: 158 S--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGSNGETLTIRHDGMDRNC 213
Query: 275 LMPGLILAIRKVVHLKNLVYGLEKFL 300
MPG+ +A RKV+ L LVYGLE L
Sbjct: 214 TMPGIFMACRKVMELDYLVYGLENLL 239
>sp|P24703|DAPB_COXBU 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=dapB PE=3 SV=2
Length = 239
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 88 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 198
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 199 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 258
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 259 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|A9NA71|DAPB_COXBR 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 88 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 198
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 199 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 258
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 259 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|A9KC25|DAPB_COXBN 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 88 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 198
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 199 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 258
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 259 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|B6J4U6|DAPB_COXB1 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain CbuK_Q154) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 88 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 198
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 199 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 258
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 259 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|A0AK12|DAPB_LISW6 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=dapB PE=3 SV=1
Length = 263
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 13/270 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KV ++G +G V V + +E+ +D ++I + + L++PV ++L+
Sbjct: 1 MKVAVSGFKGRMGHEVVKTVLREEDLELVAVLDHEPKEKNIREIVEF-SSLDVPVYANLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L ++K VV DFT Y N K G+R+VV E + +L +
Sbjct: 60 EML---EEAKPDCVV-DFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQIESLREIAETK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAVKTAEMMAE-N 174
Query: 215 QIYNREDISTDVK----ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDIT 270
+ + ++ +V+ ARG +G+R+HS+ LPGL + V F G+ +I+HD
Sbjct: 175 RTFVKQGAEDEVELMEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSY 232
Query: 271 DVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D S M G+ L+IRK L+ L+YGLE L
Sbjct: 233 DRISFMSGVALSIRKTKELETLIYGLENIL 262
>sp|B5YEB2|DAPB_DICT6 4-hydroxy-tetrahydrodipicolinate reductase OS=Dictyoglomus
thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
GN=dapB PE=3 SV=1
Length = 268
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 15/271 (5%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-PLEIPVMSDL 94
IK I+ GA ++GR A+ A +E+ GAID + GE + ++ LE
Sbjct: 2 IKTILFGACGKMGRVIGKALIDAVDIELVGAIDPYFKGEKYEKIIGTDKISLE------- 54
Query: 95 TMVLGSISQSKAR-AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
VLGSI + K V +DFT+A Y N+K+ G R VV + E ++
Sbjct: 55 --VLGSIEELKEDFDVAVDFTNAEAAYQNIKKILQMGKRMVVGTTGLTQEMINEFKDLAV 112
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
K + LIAP ++G++L+ Q A ++ +VEI+E N + D PS A A LS
Sbjct: 113 KNNTAILIAPNFALGAVLMIQLAKQVVKYFPDVEIIELHHNEKADAPSGTAILTAEILSE 172
Query: 213 LGQIYN--REDISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
+ +N +D + K G G+ D + +HS+ LPGL + + F G+ SI+HD
Sbjct: 173 EMKKHNLTHKDATKVEKLPGSRGGKLDSINIHSVRLPGLVAHQEIIFGGLGQTLSIRHDA 232
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ +PG+++AIR+++ + YGLE FL
Sbjct: 233 LSRECYIPGVLMAIREIIKREGFFYGLESFL 263
>sp|Q8Y5Z6|DAPB_LISMO 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=dapB PE=3 SV=1
Length = 263
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 11/269 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLG 214
+G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS + A ++
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGVKTAEMMAETR 175
Query: 215 QIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ + +++ ARG +G+R+HS+ LPGL + V F G+ +I+HD D
Sbjct: 176 EFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYD 233
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
S M G+ L++RK L+ L+YGLE L
Sbjct: 234 RISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q2RJL2|DAPB_MOOTA 4-hydroxy-tetrahydrodipicolinate reductase OS=Moorella
thermoacetica (strain ATCC 39073) GN=dapB PE=3 SV=1
Length = 267
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 16/273 (5%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD 93
+ I+V++ GA +GR + + + V GA+D VG DIG + + P + + D
Sbjct: 3 ATIRVVVTGAAGRMGREMTRGLLQTEDIAVVGAVDRREVGVDIGSLNGLP-PAGVIIQED 61
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L V+ S V++DFT A+ N + A G+ V+ I LE + L C+
Sbjct: 62 LAGVIASARPE----VMVDFTVAAAALANARLAVEQGVSPVIGTTGISLERLDELHQLCE 117
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
+G ++AP S+G+IL+ A A+ ++ EI+E + + D PS A + A ++
Sbjct: 118 ARQVGAVVAPNFSLGAILMMHFAEEAARYFPRAEIIEIHHDQKIDAPSGTALKTAELMAA 177
Query: 213 LGQIYNREDISTDVK-----ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
NR + + ARG G+ VHS+ LPG + V F G++ +I+H
Sbjct: 178 R---VNRPLTPSPAEEKVAGARGATY--QGLAVHSVRLPGAVAHQEVIFGGQGQLLTIRH 232
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D T ++ +PGL+LAI+KV LK +VYGLE L
Sbjct: 233 DTTSREAFLPGLLLAIKKVRQLKGVVYGLENLL 265
>sp|Q8EQD3|DAPB_OCEIH 4-hydroxy-tetrahydrodipicolinate reductase OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=dapB PE=3 SV=1
Length = 265
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 12/270 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
I +I+ G +G AV +TK + +D G ++G + L++P+ +D+
Sbjct: 3 INIIVAGPRGRMGYEAVQMITKEDSFRLVACLDHKHDGLNLGELEQFSDDLQVPIYTDID 62
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
L Q +A V +D T Y + K A + +R VV E +S L +
Sbjct: 63 SCL---KQHQAD-VFVDLTTPEVGYKHTKTALEYKVRPVVGTTGFTDEQLSELKELSKQQ 118
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNL- 213
GC+IAP +IG++L+ + + A+ ++ NVEI+E + + D PS A + A + ++
Sbjct: 119 QRGCIIAPNFAIGAVLMMKFSKMAAKYFPNVEIIEKHHDQKLDAPSGTAKKTAELIQDVR 178
Query: 214 ---GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDIT 270
Q + +E+ T ARG + DG+R+HSM LPGL + V F G+ +I HD
Sbjct: 179 ESQKQGHPKEE-ETLPGARGADM--DGMRIHSMRLPGLVAHQEVIFGGAGQTLTISHDSM 235
Query: 271 DVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ S M G+ + +V+ L+ LVYGLE L
Sbjct: 236 NRASFMDGIRECVNQVMDLEELVYGLENLL 265
>sp|Q834S6|DAPB_ENTFA 4-hydroxy-tetrahydrodipicolinate reductase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=dapB PE=3 SV=1
Length = 259
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 15/269 (5%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IK+I+ G +G A V + E+ G D H E + IPV L
Sbjct: 2 IKIIVAGFKGRMGSTATQMVLETADFELVGVYDPHEAQETV----SFNDETAIPVFQRLE 57
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
VL V IDFT Y N + A GM VV E ++ L+ +
Sbjct: 58 EVLAVKPD-----VWIDFTVPEAAYPNTRFALEHGMAPVVGTTGFTEEQINELTNLSREK 112
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL- 213
++G LIAP +IG++L+ Q A A+ ++ +VEI+E N D PS A + A + +
Sbjct: 113 AIGGLIAPNFAIGAVLMMQFAQKAAQYFPDVEIIELHHDNKLDAPSGTAIKTAEMIQEVR 172
Query: 214 --GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271
+ N +++ + ARG +G+R+HS+ LPGL + V F GE +I+HD D
Sbjct: 173 PAKKQGNPQEVESIPGARGADF--EGLRIHSVRLPGLVAHQQVQFGSVGEGLTIRHDSYD 230
Query: 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+S M G+ LA R+VV L+YGLE+ L
Sbjct: 231 RRSFMTGVALACRQVVQRTELLYGLEQML 259
>sp|A3CMU3|DAPB_STRSV 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
sanguinis (strain SK36) GN=dapB PE=3 SV=1
Length = 255
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+IKVII G ++G+AA VT+ +E+ G +D + D ++ +PV +
Sbjct: 2 SIKVIIAGFKGKMGQAAYKMVTEDSELELVGLLDPFT---------DEKEVAGVPVFNAK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ G + V +DFT YDN + A G VV E + L +
Sbjct: 53 EELAGLEAH-----VWVDFTTPKVAYDNTRFALEQGFCPVVGTTGFTPEQLEELITLSRE 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL 213
+G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A + A +S +
Sbjct: 108 KKLGGLIAPNFALGAVLLMQFAAQAAKYFANVEIIELHHDQKKDAPSGTAIKTAELISQV 167
Query: 214 ------GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
G E I V ARG DG+R+HS+ LPGL + V F GE +++H
Sbjct: 168 RPSKQQGAADEEESI---VGARGADF--DGMRIHSVRLPGLVAHQEVIFGSQGEGLTMRH 222
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D D S M G+ LAI++VV LVYGLE L
Sbjct: 223 DSYDRASFMTGVNLAIKEVVKRSELVYGLEHLL 255
>sp|A8AX95|DAPB_STRGC 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
V288) GN=dapB PE=3 SV=1
Length = 255
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IK+II G ++G+AA VT+ +E+ G +D + D ++ +PV +
Sbjct: 2 GIKIIIAGFKGKMGQAAYKMVTEDPELELVGLLDPFT---------DEKEVAGVPVFNAK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ G + V +DFT YDN + A G VV E + L +
Sbjct: 53 EELAGLEAH-----VWVDFTTPKVAYDNTRFALEQGFCPVVGTTGFTPEQLEELITLSRE 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL 213
+G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A + A +S +
Sbjct: 108 KQLGGLIAPNFALGAVLLMQFAAQAAKYFPNVEIIELHHDQKKDAPSGTAIKTAELISQV 167
Query: 214 ------GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
G E I+ ARG DG+R+HS+ LPGL + V F GE +++H
Sbjct: 168 RPSKQQGAADEEESIAG---ARGAYF--DGMRIHSVRLPGLVAHQEVIFGSQGEGLTLRH 222
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D D S M G+ LAI++VV LVYGLE L
Sbjct: 223 DSYDRASFMTGVNLAIKEVVKRSELVYGLEHLL 255
>sp|B1HTF0|DAPB_LYSSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Lysinibacillus
sphaericus (strain C3-41) GN=dapB PE=3 SV=1
Length = 265
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 16/273 (5%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+I+V I GA ++G AV V K ME+ +D VG+ + + +P+ +++
Sbjct: 2 SIRVAIAGARGKMGAEAVHTVMKHDKMELVAVLDYKEVGKTLADLDMFPASYTVPIFTEM 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ ++ + V++D T+ +VY++ K+A +R V+ + LS +
Sbjct: 62 H----DLVEATSPDVLVDLTNPHSVYNHTKEALNLNVRPVIGTTGFTDAQLEELSTIAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT------QIA 207
+GC+IAP +IG+IL+ + A A+ + +VEI+E + + D PS A Q A
Sbjct: 118 KELGCIIAPNFAIGAILMMKFAKEAAKYLPDVEIIEMHHDHKLDAPSGTAVKTAQLIQEA 177
Query: 208 NNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
G +E I ARG DG+R+HS+ LPGL + V F G++ +I+H
Sbjct: 178 RTQKTQGHPEEKETIE---GARGGDF--DGMRIHSVRLPGLVAHQQVLFGGDGQLLTIRH 232
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D + S M G+ + +V+ + LVYGLE +
Sbjct: 233 DSLNRNSFMSGIAFCVEEVMKMDQLVYGLENII 265
>sp|Q8DUL9|DAPB_STRMU 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=dapB PE=3
SV=1
Length = 255
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 133/271 (49%), Gaps = 22/271 (8%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+IKVI+ G +G AV + +E+A +D + ++I V PV +D
Sbjct: 2 SIKVIVAGFKGRMGSTAVDMIKNDSELELAALLDPFAAEKEIDGV---------PVFTDK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ ++G ++ V +DFT Y+N A G R VV E ++ L
Sbjct: 53 SDLVGLDAE-----VWVDFTIPKVAYENTHFALENGFRPVVGTTGFTQEQIADLMTLSAD 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL 213
+G LIAP +IG++LL + A AS ++ ++EI+E +D PS A + A L
Sbjct: 108 KKLGGLIAPNFAIGAVLLMEFAAKASKYFPDLEIIELHHDKKKDAPSGTAVKTAE-LIRE 166
Query: 214 GQIYNRE----DISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
+ Y ++ + T V ARG DG R+HS+ LPGL + V F GE +++HD
Sbjct: 167 ARAYKKQGAADEEETLVGARGAEF--DGFRIHSVRLPGLVAHQEVIFGAQGEGLTLRHDS 224
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D S M G+ L I++VV + LVYGLE L
Sbjct: 225 YDRISFMSGVNLGIKEVVQREQLVYGLEHLL 255
>sp|A5FQT3|DAPB_DEHSB 4-hydroxy-tetrahydrodipicolinate reductase OS=Dehalococcoides sp.
(strain BAV1) GN=dapB PE=3 SV=1
Length = 263
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 139/267 (52%), Gaps = 11/267 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IKV+++GA ++G+ + + + + GA+D + E+ M + IP +DL+
Sbjct: 4 IKVVVHGASGKMGQEVLKTLCQENNLHPVGAVDIRA--ENPAMALP-DGSGSIPYSADLS 60
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L SQ+K V++DFT A V+ A A + V+ E +S +
Sbjct: 61 SIL---SQTKPD-VMVDFTVAKASMPAVRIAAAHKVNLVIGTTGFSPEEISEIEQLAKTN 116
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA-TQIANNLSNL 213
+G ++AP ++G+I++ A AS + E++E + + D PS A +A+ L
Sbjct: 117 DIGIILAPNFALGAIIMVHLAQVASRFLSSAEVIELHHDKKLDSPSGTALVTVASMLEAR 176
Query: 214 GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQ 273
G+ +N+ ARGQ DG+RVHS+ LPGL + V F G+ +I+HD +
Sbjct: 177 GEAFNKPPKENLTDARGQ--EHDGIRVHSVRLPGLLAHQEVIFGAAGQTLTIRHDAFSRE 234
Query: 274 SLMPGLILAIRKVVHLKNLVYGLEKFL 300
MPG++LAI+++VH K V+GL+K L
Sbjct: 235 CYMPGVLLAIKEIVHTKGFVFGLDKLL 261
>sp|Q0AXH2|DAPB_SYNWW 4-hydroxy-tetrahydrodipicolinate reductase OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=dapB PE=3 SV=1
Length = 266
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM 96
+VI+ GA+ ++G+ + A+ +E+ A+D + GE + + + L+I + +DL
Sbjct: 6 RVIVAGALGKMGKETLKAIAGDEELELIAAVDIKAKGEKVADLIGI-AGLDISLENDLDE 64
Query: 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156
VL + V++DFT+ V++N + A G+ V+ + + L +
Sbjct: 65 VLENYQPD----VLVDFTNPQAVFNNARSALKIGVFCVIGTTGLNEIEIKELEKLAGEKQ 120
Query: 157 MGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN--- 212
+G I P +IG++L+ + A A+ ++ VEI+E + + D PS A + A ++
Sbjct: 121 VGVAIIPNFAIGAVLMMKFASEAAKYFPEVEIIELHHDQKMDAPSGTAIKTAEMINANRP 180
Query: 213 LGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDV 272
L N + RG LG+ VR+HS+ LPGL + V F G+ I+HD D
Sbjct: 181 LRPPRNVREFEKIAGCRGGDLGQ--VRIHSVRLPGLIAHQEVIFGGAGQGLKIRHDSFDR 238
Query: 273 QSLMPGLILAIRKVVHLKNLVYGLEKFL 300
MPG+++ I+K++ K LVYG+E L
Sbjct: 239 AGFMPGVVMVIKKILQRKELVYGMENLL 266
>sp|Q3ZXV5|DAPB_DEHSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Dehalococcoides sp.
(strain CBDB1) GN=dapB PE=3 SV=1
Length = 263
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IKV+++GA ++G+ + + + GA+D + E M + IP +DL+
Sbjct: 4 IKVVVHGASGKMGQEVLKTLCQENNFHPVGAVDIRA--ESPAMALP-DGSGSIPYSADLS 60
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L SQ+K V++DFT A ++ A A + V+ E +S +
Sbjct: 61 SIL---SQTKPD-VMVDFTVAKASMPAIRIAAAHKVNLVIGTTGFSPEEISEIEQLAKTN 116
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA-TQIANNLSNL 213
+G ++AP ++G+I++ A AS + E++E + + D PS A +A+ L
Sbjct: 117 DIGIILAPNFALGAIIMVHLAQVASRFLSSAEVIELHHDKKLDSPSGTALVTVASMLEAR 176
Query: 214 GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQ 273
G+ +N+ ARGQ DG+RVHS+ LPGL + V F G+ +I+HD +
Sbjct: 177 GEAFNKPPKENLTDARGQ--EHDGIRVHSVRLPGLLAHQEVIFGAAGQTLTIRHDAFSRE 234
Query: 274 SLMPGLILAIRKVVHLKNLVYGLEKFL 300
MPG++LAI+++VH K V+GL+K L
Sbjct: 235 CYMPGVLLAIKEIVHTKGFVFGLDKLL 261
>sp|Q5WGQ4|DAPB_BACSK 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus clausii
(strain KSM-K16) GN=dapB PE=3 SV=1
Length = 264
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 17/271 (6%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM 96
+++I G +G+ AV + E+ +DS + G+ + + + +Q ++PV +D+
Sbjct: 3 RIVIAGPRGNMGQEAVKLCLREESFELVAVVDSKNDGKQLKGLQEFQQG-DVPVYTDMAR 61
Query: 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156
V+ID T + +++ A G+R VV E + L+ +
Sbjct: 62 CFAEHEPD----VLIDLTAPAFGRKHMEVAFEHGVRPVVGTTGFSDEDIRDLTKLAEAKE 117
Query: 157 MGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNL-- 213
+G +IAP +IG+IL+ + A +A+ + +VEI+E + + D PS A + A ++ +
Sbjct: 118 LGAIIAPNFAIGAILMMKFAQTAARYMNDVEIIEQHHDRKLDAPSGTAVKTAQLIAEVRA 177
Query: 214 ----GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDI 269
G RE+++ ARG DG+++HS+ LPG + V F G+ SI+HD
Sbjct: 178 PKKQGHEQEREEMAG---ARGADF--DGMKIHSVRLPGRVAHQEVLFGGVGQTLSIRHDS 232
Query: 270 TDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
+ +S MPG+ LA+ +VV L LVYGLE +
Sbjct: 233 LNRESFMPGVKLAVEQVVKLSTLVYGLENLI 263
>sp|B8E2S7|DAPB_DICTD 4-hydroxy-tetrahydrodipicolinate reductase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=dapB PE=3 SV=1
Length = 268
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 135/273 (49%), Gaps = 19/273 (6%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-PLEIPVMSDL 94
IK ++ GA ++G+ A+ A +E+ GAID + GE + +++ LE
Sbjct: 2 IKTVLFGACGKMGKVIGKALIDATDIELVGAIDPYFKGEKYEKIIGIDKISLE------- 54
Query: 95 TMVLGSISQ-SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
V+ SI + + V IDFT+A Y N+K+ G R VV + E +
Sbjct: 55 --VVESIDELQEDFDVAIDFTNAEAAYQNIKKVLQKGKRMVVGTTGLTQEMMEEFKDLAV 112
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSN 212
K LIAP ++G++L+ Q A ++ +VEI+E N + D PS A A L
Sbjct: 113 KNKTAILIAPNFALGAVLMIQLAKQVVKYFPDVEIIELHHNEKADAPSGTAILTAEVLRE 172
Query: 213 LGQIYN--REDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267
+ YN +D + K ARG L D + +HS+ LPGL + V F G+ SI+H
Sbjct: 173 EMKKYNLTHKDATKIEKLPGARGGKL--DSINIHSVRLPGLVAHQEVIFGGLGQTLSIRH 230
Query: 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300
D + +PG+++A+R++V + YGLE FL
Sbjct: 231 DALSRECYIPGVLMAVREIVKREGFFYGLESFL 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,361,502
Number of Sequences: 539616
Number of extensions: 3658937
Number of successful extensions: 10372
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 9938
Number of HSP's gapped (non-prelim): 330
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)