Query 022250
Match_columns 300
No_of_seqs 264 out of 1638
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 16:22:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ijp_A DHPR, dihydrodipicolina 100.0 1.6E-76 5.4E-81 549.2 27.7 251 34-300 20-284 (288)
2 4f3y_A DHPR, dihydrodipicolina 100.0 8.2E-76 2.8E-80 541.6 27.8 253 31-300 2-269 (272)
3 3qy9_A DHPR, dihydrodipicolina 100.0 5.6E-73 1.9E-77 514.9 25.1 234 35-299 3-243 (243)
4 1dih_A Dihydrodipicolinate red 100.0 4E-71 1.4E-75 510.8 24.9 250 35-300 5-268 (273)
5 1p9l_A Dihydrodipicolinate red 100.0 9.6E-70 3.3E-74 494.2 29.7 233 36-300 1-242 (245)
6 1vm6_A DHPR, dihydrodipicolina 100.0 4.6E-70 1.6E-74 487.4 23.9 210 35-300 12-224 (228)
7 1f06_A MESO-diaminopimelate D- 99.8 7.2E-22 2.5E-26 185.2 3.9 247 35-299 3-302 (320)
8 4had_A Probable oxidoreductase 99.7 3.2E-17 1.1E-21 153.9 12.8 147 33-191 21-172 (350)
9 4fb5_A Probable oxidoreductase 99.7 1.3E-16 4.4E-21 150.7 13.5 145 35-191 25-180 (393)
10 3ec7_A Putative dehydrogenase; 99.7 2.4E-16 8.3E-21 149.2 15.1 148 34-193 22-176 (357)
11 3evn_A Oxidoreductase, GFO/IDH 99.7 6.2E-16 2.1E-20 144.5 16.9 145 35-191 5-153 (329)
12 3rc1_A Sugar 3-ketoreductase; 99.7 1.4E-16 4.9E-21 150.4 12.5 146 34-191 26-175 (350)
13 4hkt_A Inositol 2-dehydrogenas 99.7 3.9E-16 1.3E-20 145.7 15.3 146 34-192 2-150 (331)
14 3i23_A Oxidoreductase, GFO/IDH 99.7 4.4E-16 1.5E-20 146.7 15.4 148 34-192 1-152 (349)
15 4ew6_A D-galactose-1-dehydroge 99.7 3.6E-16 1.2E-20 146.7 14.5 125 35-176 25-154 (330)
16 3kux_A Putative oxidoreductase 99.7 1E-15 3.6E-20 144.2 17.3 147 32-192 4-154 (352)
17 3fhl_A Putative oxidoreductase 99.7 1.1E-15 3.6E-20 144.9 15.8 143 35-192 5-152 (362)
18 3e18_A Oxidoreductase; dehydro 99.7 1.4E-15 4.9E-20 144.0 16.3 145 35-192 5-152 (359)
19 3c1a_A Putative oxidoreductase 99.7 5.5E-16 1.9E-20 143.9 13.0 141 27-179 2-145 (315)
20 3db2_A Putative NADPH-dependen 99.7 4.1E-16 1.4E-20 147.0 12.0 146 34-191 4-152 (354)
21 3mz0_A Inositol 2-dehydrogenas 99.7 9.6E-16 3.3E-20 143.9 14.5 148 34-193 1-155 (344)
22 3ohs_X Trans-1,2-dihydrobenzen 99.7 1E-15 3.6E-20 143.1 14.6 147 34-192 1-153 (334)
23 3e9m_A Oxidoreductase, GFO/IDH 99.7 1.3E-15 4.6E-20 142.4 15.2 145 35-191 5-153 (330)
24 3euw_A MYO-inositol dehydrogen 99.7 9E-16 3.1E-20 144.0 13.9 148 34-193 3-153 (344)
25 3q2i_A Dehydrogenase; rossmann 99.6 1.2E-15 4E-20 143.9 14.2 146 34-191 12-161 (354)
26 3f4l_A Putative oxidoreductase 99.6 1.9E-15 6.6E-20 142.0 15.5 147 34-192 1-152 (345)
27 3ezy_A Dehydrogenase; structur 99.6 7E-16 2.4E-20 144.9 12.0 147 34-192 1-151 (344)
28 1oi7_A Succinyl-COA synthetase 99.6 1.1E-15 3.8E-20 141.5 12.9 119 35-169 7-126 (288)
29 3moi_A Probable dehydrogenase; 99.6 7.6E-16 2.6E-20 147.2 11.5 146 34-191 1-150 (387)
30 3e82_A Putative oxidoreductase 99.6 4.2E-15 1.4E-19 141.0 16.6 144 35-192 7-154 (364)
31 2dc1_A L-aspartate dehydrogena 99.6 1E-14 3.4E-19 130.4 18.1 216 36-287 1-228 (236)
32 2yv2_A Succinyl-COA synthetase 99.6 1.9E-15 6.4E-20 140.5 13.3 119 35-169 13-133 (297)
33 4gqa_A NAD binding oxidoreduct 99.6 7.5E-16 2.6E-20 148.0 10.9 135 34-178 25-171 (412)
34 2ho3_A Oxidoreductase, GFO/IDH 99.6 5.5E-15 1.9E-19 137.6 16.2 133 35-178 1-137 (325)
35 3cea_A MYO-inositol 2-dehydrog 99.6 4.5E-15 1.5E-19 138.9 15.6 147 34-192 7-159 (346)
36 1ydw_A AX110P-like protein; st 99.6 2.1E-15 7.1E-20 142.6 12.9 123 33-165 4-131 (362)
37 2nu8_A Succinyl-COA ligase [AD 99.6 4.8E-15 1.7E-19 137.1 15.0 119 35-169 7-126 (288)
38 2yv1_A Succinyl-COA ligase [AD 99.6 2.2E-15 7.5E-20 139.8 12.4 119 35-169 13-132 (294)
39 1zh8_A Oxidoreductase; TM0312, 99.6 2.6E-15 9E-20 141.1 12.7 145 35-191 18-168 (340)
40 1tlt_A Putative oxidoreductase 99.6 3.4E-15 1.2E-19 138.6 13.1 119 35-165 5-125 (319)
41 3gdo_A Uncharacterized oxidore 99.6 5.8E-15 2E-19 139.6 14.3 131 35-177 5-139 (358)
42 3m2t_A Probable dehydrogenase; 99.6 4E-15 1.4E-19 140.9 13.1 145 35-191 5-154 (359)
43 3uuw_A Putative oxidoreductase 99.6 2.5E-15 8.6E-20 138.9 11.4 121 34-166 5-127 (308)
44 1lc0_A Biliverdin reductase A; 99.6 1E-14 3.4E-19 134.7 14.8 120 33-168 5-128 (294)
45 3u3x_A Oxidoreductase; structu 99.6 5.7E-15 1.9E-19 140.1 13.2 144 35-191 26-175 (361)
46 1h6d_A Precursor form of gluco 99.6 6.4E-15 2.2E-19 143.2 13.3 147 34-192 82-237 (433)
47 2nvw_A Galactose/lactose metab 99.6 4.6E-15 1.6E-19 146.2 12.2 160 9-177 5-189 (479)
48 3o9z_A Lipopolysaccaride biosy 99.6 2.3E-14 7.9E-19 133.5 15.3 126 35-166 3-133 (312)
49 4h3v_A Oxidoreductase domain p 99.6 3.9E-15 1.3E-19 140.4 10.1 145 35-191 6-164 (390)
50 3dty_A Oxidoreductase, GFO/IDH 99.6 7.2E-15 2.5E-19 140.9 12.1 149 35-191 12-171 (398)
51 2ixa_A Alpha-N-acetylgalactosa 99.6 2E-14 6.7E-19 139.9 14.9 153 31-192 16-178 (444)
52 2glx_A 1,5-anhydro-D-fructose 99.6 2.4E-14 8.2E-19 133.2 14.7 143 36-191 1-148 (332)
53 3ip3_A Oxidoreductase, putativ 99.6 5.3E-15 1.8E-19 138.6 10.0 146 34-191 1-155 (337)
54 3oa2_A WBPB; oxidoreductase, s 99.6 3.8E-14 1.3E-18 132.3 15.2 137 35-177 3-147 (318)
55 3bio_A Oxidoreductase, GFO/IDH 99.6 9.9E-15 3.4E-19 135.6 11.1 129 35-178 9-139 (304)
56 4gmf_A Yersiniabactin biosynth 99.6 4.7E-15 1.6E-19 141.8 9.0 118 35-166 7-129 (372)
57 3v5n_A Oxidoreductase; structu 99.6 1E-14 3.4E-19 141.0 11.4 149 35-191 37-196 (417)
58 3oqb_A Oxidoreductase; structu 99.6 1.6E-14 5.5E-19 137.4 11.6 146 35-191 6-169 (383)
59 3btv_A Galactose/lactose metab 99.5 2.9E-14 9.8E-19 138.7 12.8 134 35-177 20-169 (438)
60 3upl_A Oxidoreductase; rossman 99.5 5.6E-14 1.9E-18 137.0 13.7 149 34-191 22-191 (446)
61 2p2s_A Putative oxidoreductase 99.5 8.6E-14 2.9E-18 130.0 13.7 144 35-191 4-153 (336)
62 1xea_A Oxidoreductase, GFO/IDH 99.5 5.8E-14 2E-18 130.7 11.4 133 34-178 1-138 (323)
63 3do5_A HOM, homoserine dehydro 99.4 1.7E-13 5.8E-18 129.0 6.5 140 35-180 2-158 (327)
64 3mtj_A Homoserine dehydrogenas 99.4 3.7E-13 1.3E-17 131.3 9.2 134 35-180 10-153 (444)
65 3ing_A Homoserine dehydrogenas 99.4 2.9E-13 9.8E-18 127.3 6.9 148 35-190 4-168 (325)
66 1j5p_A Aspartate dehydrogenase 99.4 3.9E-12 1.3E-16 115.4 12.3 198 35-268 12-221 (253)
67 3c8m_A Homoserine dehydrogenas 99.4 8E-13 2.7E-17 124.4 7.3 140 35-180 6-164 (331)
68 3mwd_B ATP-citrate synthase; A 99.3 5.3E-12 1.8E-16 118.9 11.3 124 35-165 10-139 (334)
69 1ebf_A Homoserine dehydrogenas 99.2 4.3E-11 1.5E-15 113.8 10.8 166 34-210 3-203 (358)
70 2czc_A Glyceraldehyde-3-phosph 99.2 8.9E-11 3.1E-15 110.4 10.2 97 34-139 1-112 (334)
71 2fp4_A Succinyl-COA ligase [GD 99.1 4.4E-10 1.5E-14 104.6 13.9 115 36-165 14-131 (305)
72 2ejw_A HDH, homoserine dehydro 99.1 9.1E-11 3.1E-15 110.5 6.4 124 35-176 3-135 (332)
73 1nvm_B Acetaldehyde dehydrogen 99.0 9.1E-10 3.1E-14 102.8 9.9 101 34-140 3-107 (312)
74 2d59_A Hypothetical protein PH 98.9 1.6E-08 5.5E-13 83.9 11.6 112 36-171 23-137 (144)
75 1b7g_O Protein (glyceraldehyde 98.9 6.9E-09 2.3E-13 97.9 10.1 134 35-180 1-152 (340)
76 2g0t_A Conserved hypothetical 98.8 8.5E-09 2.9E-13 97.6 9.7 122 32-162 19-150 (350)
77 1cf2_P Protein (glyceraldehyde 98.8 8.7E-09 3E-13 97.1 9.7 96 35-139 1-111 (337)
78 3abi_A Putative uncharacterize 98.8 2.8E-09 9.6E-14 100.8 5.4 122 35-170 16-139 (365)
79 1y81_A Conserved hypothetical 98.8 3.7E-08 1.3E-12 81.2 11.3 112 35-170 14-128 (138)
80 3pff_A ATP-citrate synthase; p 98.7 2.6E-08 9.1E-13 103.4 10.5 122 35-164 496-624 (829)
81 2duw_A Putative COA-binding pr 98.7 4.2E-08 1.4E-12 81.5 9.3 112 36-169 14-128 (145)
82 1iuk_A Hypothetical protein TT 98.7 5.1E-08 1.7E-12 80.5 9.3 114 36-171 14-130 (140)
83 2obn_A Hypothetical protein; s 98.7 2.2E-08 7.7E-13 94.6 7.6 116 36-162 8-133 (349)
84 4ina_A Saccharopine dehydrogen 98.7 5.8E-08 2E-12 93.4 10.6 147 35-191 1-167 (405)
85 1r0k_A 1-deoxy-D-xylulose 5-ph 98.7 3.8E-08 1.3E-12 94.2 8.0 121 33-160 2-147 (388)
86 2z2v_A Hypothetical protein PH 98.7 6.5E-08 2.2E-12 92.0 9.5 135 35-191 16-157 (365)
87 2ep5_A 350AA long hypothetical 98.6 1.6E-07 5.5E-12 88.8 11.3 99 34-139 3-110 (350)
88 2ozp_A N-acetyl-gamma-glutamyl 98.6 1.3E-07 4.4E-12 89.3 10.4 98 35-140 4-102 (345)
89 1ys4_A Aspartate-semialdehyde 98.6 1.4E-07 4.7E-12 89.2 10.4 99 34-137 7-114 (354)
90 3ff4_A Uncharacterized protein 98.6 9.1E-08 3.1E-12 77.5 7.8 110 36-171 5-117 (122)
91 2dt5_A AT-rich DNA-binding pro 98.6 8.6E-08 3E-12 84.6 8.2 93 35-141 80-177 (211)
92 3e5r_O PP38, glyceraldehyde-3- 98.6 1.2E-07 4E-12 89.4 8.2 100 34-139 2-127 (337)
93 2yyy_A Glyceraldehyde-3-phosph 98.5 1E-07 3.5E-12 90.0 6.7 97 34-139 1-115 (343)
94 2vt3_A REX, redox-sensing tran 98.5 2.4E-07 8E-12 82.1 8.2 93 35-141 85-182 (215)
95 1u8f_O GAPDH, glyceraldehyde-3 98.5 1.9E-07 6.4E-12 87.9 7.2 100 34-138 2-124 (335)
96 1xyg_A Putative N-acetyl-gamma 98.5 2.7E-07 9.3E-12 87.5 8.2 97 35-140 16-115 (359)
97 3dr3_A N-acetyl-gamma-glutamyl 98.5 8.7E-07 3E-11 83.5 11.4 100 35-140 4-109 (337)
98 2ahr_A Putative pyrroline carb 98.4 5.2E-07 1.8E-11 80.6 7.5 98 34-147 2-100 (259)
99 3qsg_A NAD-binding phosphogluc 98.4 1.5E-06 5.2E-11 80.4 10.2 129 11-155 3-134 (312)
100 3ic5_A Putative saccharopine d 98.3 4.1E-06 1.4E-10 64.8 10.9 105 34-154 4-115 (118)
101 4huj_A Uncharacterized protein 98.3 6E-07 2.1E-11 78.9 6.7 129 24-167 12-153 (220)
102 3d1l_A Putative NADP oxidoredu 98.3 7.2E-07 2.5E-11 80.0 7.0 97 35-144 10-109 (266)
103 2axq_A Saccharopine dehydrogen 98.3 2.9E-06 1E-10 83.1 11.2 130 35-179 23-161 (467)
104 1yb4_A Tartronic semialdehyde 98.3 3.3E-06 1.1E-10 76.5 10.4 113 34-163 2-121 (295)
105 2ph5_A Homospermidine synthase 98.3 1.7E-06 5.9E-11 84.7 9.0 131 35-170 13-163 (480)
106 4dpl_A Malonyl-COA/succinyl-CO 98.3 2.4E-06 8.4E-11 81.0 9.4 100 32-138 4-111 (359)
107 4dpk_A Malonyl-COA/succinyl-CO 98.3 2.4E-06 8.4E-11 81.0 9.4 100 32-138 4-111 (359)
108 3cky_A 2-hydroxymethyl glutara 98.3 6.5E-06 2.2E-10 74.8 11.6 117 35-168 4-127 (301)
109 2uyy_A N-PAC protein; long-cha 98.3 4.1E-06 1.4E-10 77.0 10.4 134 16-165 8-151 (316)
110 3c24_A Putative oxidoreductase 98.3 9E-07 3.1E-11 80.5 5.8 119 27-165 2-125 (286)
111 3keo_A Redox-sensing transcrip 98.2 2.3E-06 7.8E-11 75.6 8.1 92 35-138 84-180 (212)
112 2csu_A 457AA long hypothetical 98.2 2.8E-06 9.5E-11 83.0 9.5 111 35-164 8-128 (457)
113 1vpd_A Tartronate semialdehyde 98.2 5.8E-06 2E-10 75.1 10.9 114 34-163 4-124 (299)
114 2r00_A Aspartate-semialdehyde 98.2 2.5E-06 8.6E-11 80.1 8.5 91 35-137 3-96 (336)
115 4dll_A 2-hydroxy-3-oxopropiona 98.2 1.1E-05 3.9E-10 74.7 12.6 116 34-165 30-151 (320)
116 3qha_A Putative oxidoreductase 98.2 1.3E-05 4.5E-10 73.3 12.9 121 26-163 5-130 (296)
117 2hjs_A USG-1 protein homolog; 98.2 2.6E-06 9E-11 80.1 8.3 93 34-138 5-100 (340)
118 2h78_A Hibadh, 3-hydroxyisobut 98.2 7.7E-06 2.6E-10 74.6 10.9 116 35-166 3-125 (302)
119 3pef_A 6-phosphogluconate dehy 98.2 1.4E-05 4.7E-10 72.6 12.5 112 36-163 2-120 (287)
120 3b1j_A Glyceraldehyde 3-phosph 98.2 3.4E-06 1.2E-10 79.5 8.5 134 34-180 1-168 (339)
121 2d2i_A Glyceraldehyde 3-phosph 98.2 3.6E-06 1.2E-10 80.4 8.3 95 34-132 1-117 (380)
122 3tri_A Pyrroline-5-carboxylate 98.2 2E-05 6.8E-10 71.8 12.9 114 35-166 3-124 (280)
123 3doj_A AT3G25530, dehydrogenas 98.1 2.6E-05 8.9E-10 71.8 12.8 116 32-163 18-140 (310)
124 3pwk_A Aspartate-semialdehyde 98.1 6.2E-06 2.1E-10 78.5 8.6 95 34-140 1-98 (366)
125 4e21_A 6-phosphogluconate dehy 98.1 2.8E-05 9.7E-10 73.6 13.0 121 28-161 15-138 (358)
126 2x5j_O E4PDH, D-erythrose-4-ph 98.1 6.2E-06 2.1E-10 77.7 8.2 101 34-139 1-126 (339)
127 3gt0_A Pyrroline-5-carboxylate 98.1 3.4E-06 1.2E-10 75.0 6.0 98 34-145 1-105 (247)
128 3l6d_A Putative oxidoreductase 98.1 1.4E-05 4.8E-10 73.5 10.3 119 30-164 4-127 (306)
129 2nqt_A N-acetyl-gamma-glutamyl 98.1 1E-05 3.5E-10 76.5 9.4 98 35-140 9-113 (352)
130 2gf2_A Hibadh, 3-hydroxyisobut 98.1 1.5E-05 5.1E-10 72.3 10.0 117 36-169 1-124 (296)
131 2cvz_A Dehydrogenase, 3-hydrox 98.1 1.5E-05 5.1E-10 71.8 9.9 113 35-165 1-117 (289)
132 1ff9_A Saccharopine reductase; 98.0 3.4E-05 1.2E-09 75.1 12.4 129 35-179 3-141 (450)
133 3k96_A Glycerol-3-phosphate de 98.0 2.5E-05 8.5E-10 73.8 10.7 129 30-169 23-168 (356)
134 4gbj_A 6-phosphogluconate dehy 98.0 6.7E-05 2.3E-09 69.0 13.1 117 34-166 4-125 (297)
135 3a06_A 1-deoxy-D-xylulose 5-ph 98.0 1.3E-05 4.5E-10 75.9 8.2 121 36-166 4-143 (376)
136 4ezb_A Uncharacterized conserv 98.0 5.7E-05 2E-09 69.9 12.4 113 33-160 22-143 (317)
137 3pdu_A 3-hydroxyisobutyrate de 98.0 2.3E-05 7.8E-10 71.1 9.5 115 35-165 1-122 (287)
138 3hsk_A Aspartate-semialdehyde 98.0 2.3E-05 7.8E-10 74.9 9.7 100 34-139 18-126 (381)
139 2i76_A Hypothetical protein; N 98.0 6.5E-07 2.2E-11 81.2 -1.2 94 34-143 1-95 (276)
140 1t4b_A Aspartate-semialdehyde 98.0 4.5E-05 1.5E-09 72.5 11.3 92 35-138 1-98 (367)
141 1gad_O D-glyceraldehyde-3-phos 98.0 1.8E-05 6.3E-10 74.2 8.5 101 35-140 1-122 (330)
142 3cps_A Glyceraldehyde 3-phosph 97.9 1.3E-05 4.4E-10 75.9 7.2 99 35-138 17-138 (354)
143 1vkn_A N-acetyl-gamma-glutamyl 97.9 3E-05 1E-09 73.3 9.6 97 35-140 13-110 (351)
144 1i36_A Conserved hypothetical 97.9 5.1E-05 1.8E-09 67.6 10.3 104 36-154 1-104 (264)
145 1rm4_O Glyceraldehyde 3-phosph 97.9 2.6E-05 8.9E-10 73.3 8.6 98 35-138 1-123 (337)
146 3nkl_A UDP-D-quinovosamine 4-d 97.9 0.00011 3.8E-09 59.2 11.1 35 35-70 4-38 (141)
147 3g0o_A 3-hydroxyisobutyrate de 97.9 4.2E-05 1.4E-09 70.1 9.1 115 34-164 6-128 (303)
148 1gr0_A Inositol-3-phosphate sy 97.8 0.00031 1.1E-08 66.3 14.7 141 33-180 13-216 (367)
149 3cmc_O GAPDH, glyceraldehyde-3 97.8 3.1E-05 1E-09 72.8 7.6 97 35-136 1-119 (334)
150 2rcy_A Pyrroline carboxylate r 97.8 7.2E-05 2.5E-09 66.5 9.4 92 35-146 4-100 (262)
151 3b1f_A Putative prephenate deh 97.8 0.00012 4E-09 66.2 10.9 112 35-160 6-123 (290)
152 3obb_A Probable 3-hydroxyisobu 97.8 0.00016 5.5E-09 66.7 11.8 113 35-163 3-122 (300)
153 3gg2_A Sugar dehydrogenase, UD 97.8 0.00017 6E-09 70.1 12.7 126 34-170 1-162 (450)
154 1jay_A Coenzyme F420H2:NADP+ o 97.8 5.7E-05 1.9E-09 65.0 8.2 120 36-168 1-138 (212)
155 1evy_A Glycerol-3-phosphate de 97.8 5.5E-05 1.9E-09 70.9 8.6 121 36-167 16-158 (366)
156 2ep7_A GAPDH, glyceraldehyde-3 97.8 2.7E-05 9.2E-10 73.3 6.3 134 34-180 1-165 (342)
157 3pzr_A Aspartate-semialdehyde 97.8 0.00014 5E-09 69.1 11.4 92 36-139 1-98 (370)
158 3uw3_A Aspartate-semialdehyde 97.8 0.00013 4.4E-09 69.6 10.8 93 35-139 4-102 (377)
159 3tz6_A Aspartate-semialdehyde 97.7 6.8E-05 2.3E-09 70.7 8.2 91 36-138 2-95 (344)
160 2iz1_A 6-phosphogluconate dehy 97.7 0.00017 5.8E-09 70.5 11.4 122 35-165 5-130 (474)
161 2g5c_A Prephenate dehydrogenas 97.7 0.00054 1.9E-08 61.5 13.9 102 35-152 1-110 (281)
162 1z82_A Glycerol-3-phosphate de 97.7 2.9E-05 9.8E-10 72.1 5.5 123 33-167 12-144 (335)
163 2izz_A Pyrroline-5-carboxylate 97.7 0.00016 5.6E-09 66.8 10.2 98 35-145 22-126 (322)
164 2vns_A Metalloreductase steap3 97.7 0.00032 1.1E-08 61.1 11.5 94 34-144 27-122 (215)
165 2pgd_A 6-phosphogluconate dehy 97.7 0.00033 1.1E-08 68.6 12.1 123 35-166 2-129 (482)
166 2zyd_A 6-phosphogluconate dehy 97.6 0.00028 9.4E-09 69.2 11.3 122 35-165 15-140 (480)
167 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.6 0.00023 8E-09 69.7 10.5 122 36-166 2-131 (478)
168 1hdg_O Holo-D-glyceraldehyde-3 97.6 0.00015 5E-09 68.1 8.0 96 36-136 1-120 (332)
169 3pid_A UDP-glucose 6-dehydroge 97.6 0.00081 2.8E-08 65.2 13.4 116 35-165 36-178 (432)
170 2p4q_A 6-phosphogluconate dehy 97.6 0.00064 2.2E-08 67.0 12.8 121 34-163 9-134 (497)
171 3ggo_A Prephenate dehydrogenas 97.5 0.00059 2E-08 63.1 11.7 103 35-152 33-142 (314)
172 1obf_O Glyceraldehyde 3-phosph 97.5 0.0002 6.9E-09 67.2 8.5 98 35-136 1-122 (335)
173 1yj8_A Glycerol-3-phosphate de 97.5 0.00013 4.5E-09 68.7 7.3 124 34-167 20-176 (375)
174 3lvf_P GAPDH 1, glyceraldehyde 97.5 0.00026 8.9E-09 66.4 8.8 154 33-201 2-194 (338)
175 2o3j_A UDP-glucose 6-dehydroge 97.5 0.00097 3.3E-08 65.3 13.1 74 31-114 5-94 (481)
176 3dtt_A NADP oxidoreductase; st 97.4 0.00086 2.9E-08 59.4 10.8 90 34-137 18-124 (245)
177 2f1k_A Prephenate dehydrogenas 97.4 0.00084 2.9E-08 60.1 10.8 99 36-151 1-104 (279)
178 1bg6_A N-(1-D-carboxylethyl)-L 97.4 0.00049 1.7E-08 63.6 9.4 93 35-139 4-110 (359)
179 3r6d_A NAD-dependent epimerase 97.4 0.0005 1.7E-08 59.1 8.5 34 34-67 3-37 (221)
180 4a7p_A UDP-glucose dehydrogena 97.4 0.0011 3.9E-08 64.4 11.7 125 35-171 8-166 (446)
181 4fgw_A Glycerol-3-phosphate de 97.4 0.00058 2E-08 65.4 9.4 136 26-169 25-188 (391)
182 4dib_A GAPDH, glyceraldehyde 3 97.4 0.00034 1.2E-08 65.7 7.5 135 33-180 2-167 (345)
183 1yqg_A Pyrroline-5-carboxylate 97.4 0.00023 7.9E-09 63.2 6.1 100 36-154 1-102 (263)
184 3dhn_A NAD-dependent epimerase 97.3 0.00062 2.1E-08 58.4 8.5 34 34-68 3-36 (227)
185 3ktd_A Prephenate dehydrogenas 97.3 0.00093 3.2E-08 62.7 10.3 111 27-150 2-113 (341)
186 3c85_A Putative glutathione-re 97.3 0.0021 7.2E-08 53.8 11.5 132 35-180 39-176 (183)
187 1x0v_A GPD-C, GPDH-C, glycerol 97.3 0.0018 6.1E-08 60.0 11.9 123 35-167 8-159 (354)
188 3doc_A Glyceraldehyde 3-phosph 97.3 0.00048 1.6E-08 64.5 7.7 133 34-181 1-167 (335)
189 2g1u_A Hypothetical protein TM 97.3 0.0031 1E-07 51.6 11.8 121 35-172 19-146 (155)
190 3pym_A GAPDH 3, glyceraldehyde 97.3 0.0007 2.4E-08 63.3 8.6 152 35-201 1-191 (332)
191 4gwg_A 6-phosphogluconate dehy 97.3 0.0029 9.8E-08 62.2 13.4 119 35-162 4-127 (484)
192 1f0y_A HCDH, L-3-hydroxyacyl-C 97.3 0.00074 2.5E-08 61.5 8.5 100 35-144 15-143 (302)
193 2b4r_O Glyceraldehyde-3-phosph 97.3 0.00077 2.6E-08 63.4 8.8 99 35-137 11-131 (345)
194 2yv3_A Aspartate-semialdehyde 97.3 0.00031 1.1E-08 65.7 6.0 91 36-139 1-94 (331)
195 3slg_A PBGP3 protein; structur 97.3 0.0008 2.7E-08 62.3 8.8 45 24-68 10-57 (372)
196 3c7a_A Octopine dehydrogenase; 97.2 0.00079 2.7E-08 63.8 8.8 84 34-127 1-103 (404)
197 3fwz_A Inner membrane protein 97.2 0.0027 9.2E-08 51.2 10.8 129 30-175 2-137 (140)
198 3e48_A Putative nucleoside-dip 97.2 0.0012 4E-08 58.9 9.3 112 36-160 1-136 (289)
199 3dmy_A Protein FDRA; predicted 97.2 0.00098 3.3E-08 65.4 9.3 76 86-165 19-94 (480)
200 4e12_A Diketoreductase; oxidor 97.2 0.001 3.4E-08 60.3 8.5 100 35-145 4-129 (283)
201 1lss_A TRK system potassium up 97.2 0.005 1.7E-07 48.4 11.5 124 36-175 5-134 (140)
202 3oj0_A Glutr, glutamyl-tRNA re 97.2 0.00022 7.6E-09 57.8 3.4 85 35-134 21-107 (144)
203 4egb_A DTDP-glucose 4,6-dehydr 97.2 0.0029 9.8E-08 57.8 11.3 55 9-67 2-57 (346)
204 3g79_A NDP-N-acetyl-D-galactos 97.1 0.0036 1.2E-07 61.4 12.3 124 35-167 18-184 (478)
205 2wm3_A NMRA-like family domain 97.1 0.006 2.1E-07 54.6 12.8 91 34-135 4-112 (299)
206 2r6j_A Eugenol synthase 1; phe 97.1 0.0015 5.3E-08 59.1 8.5 135 25-174 3-165 (318)
207 1mv8_A GMD, GDP-mannose 6-dehy 97.1 0.004 1.4E-07 59.9 11.6 69 36-115 1-85 (436)
208 2q3e_A UDP-glucose 6-dehydroge 97.0 0.0069 2.4E-07 58.8 13.4 70 35-114 5-90 (467)
209 2pv7_A T-protein [includes: ch 97.0 0.0078 2.7E-07 54.8 12.7 89 34-151 20-112 (298)
210 2g82_O GAPDH, glyceraldehyde-3 97.0 0.0012 4E-08 61.9 7.2 131 36-180 1-162 (331)
211 2ew2_A 2-dehydropantoate 2-red 97.0 0.0013 4.3E-08 59.4 7.1 100 34-142 2-113 (316)
212 3v1y_O PP38, glyceraldehyde-3- 97.0 0.004 1.4E-07 58.3 10.5 152 35-201 3-195 (337)
213 1txg_A Glycerol-3-phosphate de 97.0 0.0015 5E-08 59.8 7.4 120 36-166 1-141 (335)
214 2qyt_A 2-dehydropantoate 2-red 97.0 0.0015 5E-08 59.3 7.2 97 34-142 7-122 (317)
215 3fr7_A Putative ketol-acid red 97.0 0.0012 4.3E-08 64.8 7.1 155 36-212 55-225 (525)
216 3ids_C GAPDH, glyceraldehyde-3 96.9 0.0018 6E-08 61.2 7.8 154 34-201 1-208 (359)
217 1np3_A Ketol-acid reductoisome 96.9 0.0014 4.8E-08 61.1 7.0 75 35-124 16-90 (338)
218 3i6i_A Putative leucoanthocyan 96.9 0.0054 1.9E-07 56.2 10.8 33 35-68 10-42 (346)
219 3dqp_A Oxidoreductase YLBE; al 96.9 0.0026 8.9E-08 54.4 7.7 32 36-68 1-32 (219)
220 2rir_A Dipicolinate synthase, 96.8 0.0022 7.6E-08 58.5 7.5 116 35-169 157-274 (300)
221 3m2p_A UDP-N-acetylglucosamine 96.8 0.0036 1.2E-07 56.4 8.8 89 34-134 1-105 (311)
222 2raf_A Putative dinucleotide-b 96.8 0.0028 9.5E-08 54.9 7.6 73 35-141 19-94 (209)
223 3qvo_A NMRA family protein; st 96.8 0.0038 1.3E-07 54.2 8.5 34 34-67 22-55 (236)
224 3sc6_A DTDP-4-dehydrorhamnose 96.8 0.0016 5.3E-08 57.9 6.0 81 34-134 4-102 (287)
225 2i99_A MU-crystallin homolog; 96.8 0.0015 5.1E-08 60.2 5.8 88 35-136 135-225 (312)
226 2y0c_A BCEC, UDP-glucose dehyd 96.8 0.015 5.1E-07 56.9 13.2 121 35-167 8-165 (478)
227 3h9e_O Glyceraldehyde-3-phosph 96.8 0.0029 1E-07 59.4 7.7 132 34-180 6-169 (346)
228 3h2s_A Putative NADH-flavin re 96.7 0.0052 1.8E-07 52.3 8.4 32 36-68 1-32 (224)
229 1hdo_A Biliverdin IX beta redu 96.7 0.0061 2.1E-07 50.9 8.5 32 36-68 4-35 (206)
230 2q1s_A Putative nucleotide sug 96.7 0.0031 1.1E-07 58.7 7.3 58 9-67 6-64 (377)
231 3llv_A Exopolyphosphatase-rela 96.7 0.0099 3.4E-07 47.4 9.3 125 35-175 6-135 (141)
232 1vjp_A MYO-inositol-1-phosphat 96.6 0.021 7.3E-07 54.1 12.6 143 35-180 13-237 (394)
233 1dlj_A UDP-glucose dehydrogena 96.6 0.017 5.7E-07 55.1 12.1 115 36-166 1-143 (402)
234 3c1o_A Eugenol synthase; pheny 96.6 0.0046 1.6E-07 55.9 7.7 128 33-168 2-158 (321)
235 2hmt_A YUAA protein; RCK, KTN, 96.6 0.017 5.7E-07 45.4 10.0 126 35-176 6-137 (144)
236 2x4g_A Nucleoside-diphosphate- 96.6 0.008 2.7E-07 54.5 9.2 33 35-68 13-45 (342)
237 1qyc_A Phenylcoumaran benzylic 96.5 0.0066 2.2E-07 54.3 8.1 125 35-168 4-158 (308)
238 1x7d_A Ornithine cyclodeaminas 96.5 0.00051 1.8E-08 64.7 0.7 94 35-137 129-226 (350)
239 1jw9_B Molybdopterin biosynthe 96.5 0.0051 1.7E-07 54.9 7.3 33 36-70 32-64 (249)
240 3d4o_A Dipicolinate synthase s 96.5 0.0053 1.8E-07 55.8 7.3 116 35-169 155-272 (293)
241 2dpo_A L-gulonate 3-dehydrogen 96.5 0.0072 2.5E-07 56.0 8.2 99 35-144 6-130 (319)
242 3cin_A MYO-inositol-1-phosphat 96.4 0.022 7.5E-07 54.4 11.4 143 34-180 12-237 (394)
243 1qyd_A Pinoresinol-lariciresin 96.4 0.0098 3.4E-07 53.3 8.5 92 35-135 4-113 (313)
244 2d5c_A AROE, shikimate 5-dehyd 96.4 0.0013 4.6E-08 58.8 2.7 105 37-160 118-226 (263)
245 1pzg_A LDH, lactate dehydrogen 96.4 0.024 8.2E-07 52.6 11.1 73 33-114 7-86 (331)
246 2hk9_A Shikimate dehydrogenase 96.3 0.0054 1.8E-07 55.4 6.4 107 35-160 129-239 (275)
247 1oc2_A DTDP-glucose 4,6-dehydr 96.3 0.013 4.5E-07 53.3 9.1 33 35-67 4-37 (348)
248 2yjz_A Metalloreductase steap4 95.3 0.00063 2.2E-08 58.9 0.0 91 34-141 18-109 (201)
249 3i83_A 2-dehydropantoate 2-red 96.3 0.004 1.4E-07 57.2 5.4 117 34-165 1-129 (320)
250 3ew7_A LMO0794 protein; Q8Y8U8 96.3 0.012 4.2E-07 49.7 8.0 32 36-68 1-32 (221)
251 3ba1_A HPPR, hydroxyphenylpyru 96.3 0.016 5.3E-07 54.1 9.3 102 35-157 164-270 (333)
252 1xq6_A Unknown protein; struct 96.3 0.0095 3.2E-07 51.3 7.3 34 34-67 3-37 (253)
253 2d0i_A Dehydrogenase; structur 96.2 0.0071 2.4E-07 56.3 6.8 104 35-158 146-255 (333)
254 3e8x_A Putative NAD-dependent 96.2 0.023 7.8E-07 49.0 9.5 33 35-68 21-53 (236)
255 3sxp_A ADP-L-glycero-D-mannohe 96.2 0.038 1.3E-06 50.7 11.5 34 35-68 10-44 (362)
256 1ks9_A KPA reductase;, 2-dehyd 96.2 0.019 6.4E-07 51.0 9.0 94 36-142 1-102 (291)
257 1mx3_A CTBP1, C-terminal bindi 96.2 0.0093 3.2E-07 56.0 7.2 66 35-116 168-233 (347)
258 2yy7_A L-threonine dehydrogena 96.2 0.011 3.8E-07 52.8 7.5 34 34-67 1-35 (312)
259 3ius_A Uncharacterized conserv 96.2 0.018 6E-07 51.0 8.7 33 34-68 4-36 (286)
260 2bll_A Protein YFBG; decarboxy 96.2 0.029 9.8E-07 50.7 10.3 33 36-68 1-33 (345)
261 2ydy_A Methionine adenosyltran 96.2 0.012 4E-07 52.9 7.6 88 34-134 1-106 (315)
262 3hwr_A 2-dehydropantoate 2-red 96.2 0.022 7.4E-07 52.3 9.6 106 32-152 16-133 (318)
263 4b8w_A GDP-L-fucose synthase; 96.1 0.02 6.9E-07 50.7 9.1 28 31-58 2-29 (319)
264 3l4b_C TRKA K+ channel protien 96.1 0.011 3.7E-07 50.9 7.0 122 36-172 1-128 (218)
265 3hn2_A 2-dehydropantoate 2-red 96.1 0.014 4.6E-07 53.4 7.9 105 34-152 1-116 (312)
266 3ruf_A WBGU; rossmann fold, UD 96.1 0.021 7.3E-07 52.0 9.2 33 35-68 25-57 (351)
267 1vl0_A DTDP-4-dehydrorhamnose 96.1 0.01 3.5E-07 52.7 6.9 83 33-135 10-110 (292)
268 3rui_A Ubiquitin-like modifier 96.1 0.012 4.2E-07 55.2 7.3 33 35-69 34-66 (340)
269 2rh8_A Anthocyanidin reductase 96.1 0.04 1.4E-06 49.9 10.7 34 34-68 8-41 (338)
270 3hja_A GAPDH, glyceraldehyde-3 96.0 0.0057 2E-07 57.6 5.0 153 31-200 17-214 (356)
271 1rpn_A GDP-mannose 4,6-dehydra 96.0 0.021 7.2E-07 51.6 8.8 37 31-68 10-46 (335)
272 3l9w_A Glutathione-regulated p 96.0 0.034 1.2E-06 53.3 10.6 123 35-172 4-131 (413)
273 1e6u_A GDP-fucose synthetase; 96.0 0.019 6.5E-07 51.6 8.4 62 35-115 3-64 (321)
274 2zcu_A Uncharacterized oxidore 96.0 0.013 4.3E-07 51.7 7.0 116 37-165 1-139 (286)
275 2gas_A Isoflavone reductase; N 96.0 0.016 5.6E-07 51.6 7.7 94 35-136 2-110 (307)
276 3ay3_A NAD-dependent epimerase 96.0 0.01 3.5E-07 52.2 6.2 32 34-66 1-32 (267)
277 2w2k_A D-mandelate dehydrogena 96.0 0.011 3.7E-07 55.4 6.6 69 35-117 163-231 (348)
278 4dgs_A Dehydrogenase; structur 96.0 0.027 9.4E-07 52.7 9.4 61 35-115 171-231 (340)
279 1zcj_A Peroxisomal bifunctiona 95.9 0.029 1E-06 54.4 9.8 33 35-70 37-69 (463)
280 1zud_1 Adenylyltransferase THI 95.9 0.02 6.8E-07 51.1 7.9 34 35-70 28-61 (251)
281 2jl1_A Triphenylmethane reduct 95.9 0.013 4.3E-07 51.8 6.6 120 36-168 1-145 (287)
282 2x6t_A ADP-L-glycero-D-manno-h 95.9 0.025 8.6E-07 51.8 8.7 32 36-67 47-78 (357)
283 1leh_A Leucine dehydrogenase; 95.9 0.0068 2.3E-07 57.4 4.8 109 36-166 174-285 (364)
284 4id9_A Short-chain dehydrogena 95.9 0.025 8.4E-07 51.5 8.4 87 35-134 19-122 (347)
285 2gn4_A FLAA1 protein, UDP-GLCN 95.9 0.022 7.5E-07 52.6 8.2 42 26-67 9-54 (344)
286 3g17_A Similar to 2-dehydropan 95.9 0.0045 1.5E-07 56.2 3.4 98 34-142 1-101 (294)
287 3gpi_A NAD-dependent epimerase 95.8 0.015 5E-07 51.7 6.7 32 35-68 3-34 (286)
288 3enk_A UDP-glucose 4-epimerase 95.8 0.027 9.2E-07 51.0 8.5 33 34-67 4-36 (341)
289 2b69_A UDP-glucuronate decarbo 95.8 0.028 9.6E-07 51.2 8.6 33 34-67 26-58 (343)
290 2c5a_A GDP-mannose-3', 5'-epim 95.8 0.047 1.6E-06 50.7 10.3 34 34-68 28-61 (379)
291 1qp8_A Formate dehydrogenase; 95.8 0.0088 3E-07 55.0 5.2 102 35-158 124-230 (303)
292 1xgk_A Nitrogen metabolite rep 95.8 0.074 2.5E-06 49.2 11.5 114 35-159 5-145 (352)
293 2gcg_A Glyoxylate reductase/hy 95.8 0.024 8.1E-07 52.6 8.0 66 35-116 155-220 (330)
294 3jtm_A Formate dehydrogenase, 95.7 0.013 4.5E-07 55.1 6.2 66 35-115 164-229 (351)
295 2pzm_A Putative nucleotide sug 95.7 0.039 1.3E-06 50.1 9.2 39 29-68 13-52 (330)
296 1n2s_A DTDP-4-, DTDP-glucose o 95.7 0.015 5.1E-07 51.7 6.2 82 36-134 1-100 (299)
297 2tmg_A Protein (glutamate dehy 95.6 0.045 1.5E-06 52.7 9.6 137 35-186 209-363 (415)
298 1ek6_A UDP-galactose 4-epimera 95.6 0.038 1.3E-06 50.1 8.7 33 34-67 1-33 (348)
299 3ego_A Probable 2-dehydropanto 95.6 0.016 5.5E-07 52.9 6.1 94 34-143 1-105 (307)
300 2ekl_A D-3-phosphoglycerate de 95.6 0.0093 3.2E-07 55.1 4.5 64 35-115 142-205 (313)
301 2q1w_A Putative nucleotide sug 95.6 0.044 1.5E-06 49.8 8.9 33 35-68 21-53 (333)
302 1zej_A HBD-9, 3-hydroxyacyl-CO 95.5 0.028 9.6E-07 51.5 7.2 70 36-118 13-85 (293)
303 2j6i_A Formate dehydrogenase; 95.5 0.013 4.3E-07 55.4 4.9 68 35-117 164-232 (364)
304 3mog_A Probable 3-hydroxybutyr 95.4 0.017 5.9E-07 56.5 6.0 33 35-70 5-37 (483)
305 2dbq_A Glyoxylate reductase; D 95.4 0.026 8.9E-07 52.5 6.7 105 35-157 150-259 (334)
306 4gsl_A Ubiquitin-like modifier 95.4 0.028 9.4E-07 56.6 7.3 34 35-70 326-359 (615)
307 3k6j_A Protein F01G10.3, confi 95.4 0.029 1E-06 54.7 7.3 34 34-70 53-86 (460)
308 3st7_A Capsular polysaccharide 95.4 0.029 1E-06 51.7 7.1 74 36-134 1-90 (369)
309 1gdh_A D-glycerate dehydrogena 95.3 0.025 8.5E-07 52.3 6.4 65 35-115 146-211 (320)
310 1smk_A Malate dehydrogenase, g 95.3 0.047 1.6E-06 50.5 8.3 74 34-114 7-84 (326)
311 3vps_A TUNA, NAD-dependent epi 95.3 0.073 2.5E-06 47.4 9.4 34 34-68 6-39 (321)
312 1omo_A Alanine dehydrogenase; 95.3 0.013 4.5E-07 54.2 4.4 89 35-136 125-216 (322)
313 3u62_A Shikimate dehydrogenase 95.3 0.018 6.2E-07 51.6 5.2 66 37-115 110-175 (253)
314 4e3z_A Putative oxidoreductase 95.3 0.12 4E-06 45.7 10.6 83 35-139 26-113 (272)
315 2c20_A UDP-glucose 4-epimerase 95.2 0.063 2.2E-06 48.3 8.7 32 35-67 1-32 (330)
316 1sb8_A WBPP; epimerase, 4-epim 95.2 0.072 2.5E-06 48.6 9.1 33 35-68 27-59 (352)
317 2bka_A CC3, TAT-interacting pr 95.2 0.16 5.5E-06 43.4 10.8 31 36-67 19-51 (242)
318 1eq2_A ADP-L-glycero-D-mannohe 95.2 0.065 2.2E-06 47.6 8.5 89 37-134 1-112 (310)
319 1orr_A CDP-tyvelose-2-epimeras 95.2 0.049 1.7E-06 49.2 7.8 32 35-67 1-32 (347)
320 2ggs_A 273AA long hypothetical 95.2 0.11 3.9E-06 45.1 10.0 30 36-67 1-30 (273)
321 2nac_A NAD-dependent formate d 95.2 0.017 6E-07 55.1 4.9 66 35-115 191-256 (393)
322 1t2d_A LDH-P, L-lactate dehydr 95.1 0.14 4.9E-06 47.2 10.9 70 35-114 4-80 (322)
323 3ehe_A UDP-glucose 4-epimerase 95.1 0.064 2.2E-06 48.0 8.3 70 35-114 1-71 (313)
324 2hrz_A AGR_C_4963P, nucleoside 95.1 0.095 3.3E-06 47.4 9.6 33 35-67 14-52 (342)
325 1wwk_A Phosphoglycerate dehydr 95.1 0.038 1.3E-06 50.8 6.8 65 35-116 142-206 (307)
326 4g2n_A D-isomer specific 2-hyd 95.1 0.081 2.8E-06 49.6 9.1 64 35-115 173-236 (345)
327 2hun_A 336AA long hypothetical 95.1 0.15 5.1E-06 45.9 10.7 32 36-67 4-36 (336)
328 2i6t_A Ubiquitin-conjugating e 95.0 0.055 1.9E-06 49.7 7.7 68 35-114 14-85 (303)
329 1r6d_A TDP-glucose-4,6-dehydra 95.0 0.22 7.5E-06 44.9 11.7 32 36-67 1-37 (337)
330 1z7e_A Protein aRNA; rossmann 95.0 0.078 2.7E-06 53.3 9.5 35 34-68 314-348 (660)
331 3vtf_A UDP-glucose 6-dehydroge 95.0 0.098 3.3E-06 50.7 9.7 125 33-166 19-177 (444)
332 1mld_A Malate dehydrogenase; o 94.9 0.1 3.5E-06 47.9 9.4 72 36-114 1-76 (314)
333 2hjr_A Malate dehydrogenase; m 94.9 0.15 5.1E-06 47.2 10.4 71 34-114 13-90 (328)
334 1kew_A RMLB;, DTDP-D-glucose 4 94.9 0.16 5.4E-06 46.2 10.5 32 36-67 1-32 (361)
335 4h7p_A Malate dehydrogenase; s 94.9 0.029 9.8E-07 52.7 5.5 76 30-113 18-107 (345)
336 3rft_A Uronate dehydrogenase; 94.9 0.062 2.1E-06 47.4 7.5 33 35-69 3-35 (267)
337 3gvx_A Glycerate dehydrogenase 94.9 0.042 1.4E-06 50.3 6.4 61 35-115 122-182 (290)
338 1gpj_A Glutamyl-tRNA reductase 94.9 0.032 1.1E-06 53.1 5.9 90 35-138 167-266 (404)
339 1ur5_A Malate dehydrogenase; o 94.8 0.044 1.5E-06 50.3 6.5 72 34-114 1-78 (309)
340 3ghy_A Ketopantoate reductase 94.8 0.044 1.5E-06 50.4 6.6 93 35-140 3-107 (335)
341 3oh8_A Nucleoside-diphosphate 94.8 0.076 2.6E-06 51.8 8.6 34 35-69 147-180 (516)
342 1t2a_A GDP-mannose 4,6 dehydra 94.8 0.086 2.9E-06 48.5 8.4 34 34-68 23-56 (375)
343 1hyh_A L-hicdh, L-2-hydroxyiso 94.7 0.049 1.7E-06 49.7 6.6 73 35-116 1-79 (309)
344 3evt_A Phosphoglycerate dehydr 94.7 0.026 9E-07 52.4 4.7 64 35-115 137-200 (324)
345 2ewd_A Lactate dehydrogenase,; 94.7 0.11 3.9E-06 47.4 9.0 71 34-114 3-80 (317)
346 4b4o_A Epimerase family protei 94.7 0.033 1.1E-06 49.7 5.1 32 36-68 1-32 (298)
347 3vh1_A Ubiquitin-like modifier 94.7 0.04 1.4E-06 55.4 6.1 33 35-69 327-359 (598)
348 1y8q_A Ubiquitin-like 1 activa 94.6 0.094 3.2E-06 49.0 8.4 33 35-69 36-68 (346)
349 3h5n_A MCCB protein; ubiquitin 94.6 0.071 2.4E-06 50.0 7.5 33 35-69 118-150 (353)
350 1dxy_A D-2-hydroxyisocaproate 94.6 0.1 3.6E-06 48.4 8.5 104 35-158 145-253 (333)
351 1sc6_A PGDH, D-3-phosphoglycer 94.5 0.094 3.2E-06 50.1 8.2 62 35-115 145-206 (404)
352 3h8v_A Ubiquitin-like modifier 94.5 0.11 3.6E-06 47.7 8.2 122 35-164 36-170 (292)
353 3aog_A Glutamate dehydrogenase 94.5 0.068 2.3E-06 51.7 7.1 136 35-186 235-388 (440)
354 2bma_A Glutamate dehydrogenase 94.4 0.15 5E-06 49.8 9.3 137 36-186 253-416 (470)
355 1j4a_A D-LDH, D-lactate dehydr 94.4 0.057 1.9E-06 50.2 6.2 63 35-115 146-208 (333)
356 2qk4_A Trifunctional purine bi 94.4 0.18 6.1E-06 48.1 9.9 124 25-159 14-143 (452)
357 3gvi_A Malate dehydrogenase; N 94.4 0.059 2E-06 50.1 6.3 72 31-114 2-83 (324)
358 1gy8_A UDP-galactose 4-epimera 94.3 0.18 6.2E-06 46.5 9.6 32 36-67 3-34 (397)
359 2g76_A 3-PGDH, D-3-phosphoglyc 94.3 0.069 2.4E-06 49.8 6.6 65 35-116 165-229 (335)
360 3hhp_A Malate dehydrogenase; M 94.3 0.064 2.2E-06 49.5 6.3 70 36-114 1-77 (312)
361 3hg7_A D-isomer specific 2-hyd 94.3 0.1 3.4E-06 48.5 7.5 64 35-115 140-203 (324)
362 1id1_A Putative potassium chan 94.2 0.13 4.6E-06 41.4 7.5 120 35-169 3-131 (153)
363 3ko8_A NAD-dependent epimerase 94.2 0.14 4.8E-06 45.5 8.3 31 36-67 1-31 (312)
364 1ygy_A PGDH, D-3-phosphoglycer 94.2 0.054 1.8E-06 53.5 5.9 66 35-117 142-207 (529)
365 4hy3_A Phosphoglycerate oxidor 94.2 0.087 3E-06 49.8 7.0 64 35-115 176-239 (365)
366 2o23_A HADH2 protein; HSD17B10 94.2 0.37 1.3E-05 41.8 10.7 88 28-139 4-95 (265)
367 3phh_A Shikimate dehydrogenase 94.2 0.3 1E-05 44.1 10.3 119 35-179 118-242 (269)
368 3gg9_A D-3-phosphoglycerate de 94.1 0.062 2.1E-06 50.5 5.9 65 35-115 160-224 (352)
369 3eag_A UDP-N-acetylmuramate:L- 94.1 0.17 5.7E-06 46.6 8.7 87 35-134 4-94 (326)
370 4dqv_A Probable peptide synthe 94.1 0.2 6.9E-06 48.3 9.6 35 34-68 72-108 (478)
371 3au8_A 1-deoxy-D-xylulose 5-ph 94.0 0.24 8.3E-06 47.9 9.8 117 17-137 54-204 (488)
372 1guz_A Malate dehydrogenase; o 94.0 0.46 1.6E-05 43.3 11.5 70 36-114 1-77 (310)
373 1tt5_A APPBP1, amyloid protein 94.0 0.19 6.5E-06 49.7 9.4 101 35-137 32-156 (531)
374 1v9l_A Glutamate dehydrogenase 94.0 0.11 3.6E-06 50.1 7.2 135 36-186 211-369 (421)
375 2wtb_A MFP2, fatty acid multif 94.0 0.12 4.2E-06 53.0 8.1 33 35-70 312-344 (725)
376 2cuk_A Glycerate dehydrogenase 93.9 0.13 4.4E-06 47.3 7.5 61 35-117 144-204 (311)
377 3hdj_A Probable ornithine cycl 93.9 0.067 2.3E-06 49.3 5.6 89 36-137 122-214 (313)
378 1c1d_A L-phenylalanine dehydro 93.9 0.12 4.2E-06 48.5 7.5 109 35-166 175-286 (355)
379 2v6g_A Progesterone 5-beta-red 93.9 0.15 5.1E-06 46.4 7.9 32 36-68 2-38 (364)
380 3ado_A Lambda-crystallin; L-gu 93.9 0.12 4E-06 48.0 7.1 32 36-70 7-38 (319)
381 3pp8_A Glyoxylate/hydroxypyruv 93.9 0.053 1.8E-06 50.1 4.8 64 35-115 139-202 (315)
382 3un1_A Probable oxidoreductase 93.9 0.15 5.1E-06 45.0 7.6 74 36-139 29-105 (260)
383 2pi1_A D-lactate dehydrogenase 93.9 0.079 2.7E-06 49.3 6.0 63 35-115 141-203 (334)
384 2yq5_A D-isomer specific 2-hyd 93.8 0.18 6.1E-06 47.1 8.4 62 35-115 148-209 (343)
385 3v2g_A 3-oxoacyl-[acyl-carrier 93.8 0.34 1.2E-05 43.0 9.9 85 36-140 32-119 (271)
386 4iiu_A 3-oxoacyl-[acyl-carrier 93.8 0.42 1.4E-05 41.9 10.5 85 36-140 27-114 (267)
387 3don_A Shikimate dehydrogenase 93.8 0.045 1.5E-06 49.7 4.1 68 36-116 118-185 (277)
388 4ea9_A Perosamine N-acetyltran 93.8 0.36 1.2E-05 41.4 9.8 83 35-133 12-98 (220)
389 2aef_A Calcium-gated potassium 93.8 0.19 6.6E-06 43.3 8.0 119 35-172 9-134 (234)
390 3fbt_A Chorismate mutase and s 93.7 0.11 3.8E-06 47.3 6.6 122 35-179 122-248 (282)
391 3k5i_A Phosphoribosyl-aminoimi 93.7 0.18 6.3E-06 47.6 8.4 36 30-67 19-54 (403)
392 1b8p_A Protein (malate dehydro 93.7 0.053 1.8E-06 50.1 4.5 72 35-114 5-91 (329)
393 3ajr_A NDP-sugar epimerase; L- 93.7 0.14 4.9E-06 45.6 7.3 31 37-67 1-32 (317)
394 1n7h_A GDP-D-mannose-4,6-dehyd 93.7 0.26 8.9E-06 45.3 9.3 33 35-68 28-60 (381)
395 3k92_A NAD-GDH, NAD-specific g 93.7 0.15 5.3E-06 49.0 7.8 136 35-186 221-373 (424)
396 3aoe_E Glutamate dehydrogenase 93.7 0.16 5.5E-06 48.8 7.9 136 35-186 218-367 (419)
397 3k5p_A D-3-phosphoglycerate de 93.7 0.19 6.5E-06 48.3 8.4 62 35-115 156-217 (416)
398 1bgv_A Glutamate dehydrogenase 93.6 0.19 6.5E-06 48.7 8.3 138 35-185 230-394 (449)
399 3fi9_A Malate dehydrogenase; s 93.5 0.096 3.3E-06 49.0 5.9 70 35-113 8-83 (343)
400 1wdk_A Fatty oxidation complex 93.5 0.091 3.1E-06 53.8 6.2 33 35-70 314-346 (715)
401 3gqv_A Enoyl reductase; medium 93.4 0.37 1.3E-05 44.8 9.9 32 36-68 166-197 (371)
402 2yfq_A Padgh, NAD-GDH, NAD-spe 93.4 0.073 2.5E-06 51.3 5.1 136 35-186 212-370 (421)
403 4da9_A Short-chain dehydrogena 93.4 0.68 2.3E-05 41.1 11.2 85 36-140 30-117 (280)
404 1ldn_A L-lactate dehydrogenase 93.4 0.16 5.4E-06 46.7 7.1 34 35-70 6-40 (316)
405 1y1p_A ARII, aldehyde reductas 93.4 0.17 5.7E-06 45.5 7.2 33 35-68 11-43 (342)
406 2ph3_A 3-oxoacyl-[acyl carrier 93.4 0.5 1.7E-05 40.3 10.0 85 36-140 2-90 (245)
407 2p5y_A UDP-glucose 4-epimerase 93.3 0.28 9.7E-06 43.6 8.6 30 36-66 1-30 (311)
408 2c29_D Dihydroflavonol 4-reduc 93.3 0.34 1.1E-05 43.7 9.1 33 35-68 5-37 (337)
409 3vku_A L-LDH, L-lactate dehydr 93.3 0.13 4.6E-06 47.7 6.5 71 35-114 9-84 (326)
410 2pk3_A GDP-6-deoxy-D-LYXO-4-he 93.3 0.29 1E-05 43.6 8.6 32 35-67 12-43 (321)
411 4e5n_A Thermostable phosphite 93.2 0.13 4.5E-06 47.7 6.4 65 35-115 145-209 (330)
412 1db3_A GDP-mannose 4,6-dehydra 93.2 0.27 9.3E-06 44.8 8.4 32 35-67 1-32 (372)
413 1pqw_A Polyketide synthase; ro 93.2 0.1 3.5E-06 43.7 5.1 30 36-66 40-69 (198)
414 2c07_A 3-oxoacyl-(acyl-carrier 93.2 0.92 3.2E-05 40.1 11.7 83 36-139 45-130 (285)
415 3uxy_A Short-chain dehydrogena 93.1 0.25 8.6E-06 43.7 7.9 56 9-65 2-57 (266)
416 1npy_A Hypothetical shikimate 93.1 0.07 2.4E-06 48.2 4.2 121 36-179 120-247 (271)
417 4iin_A 3-ketoacyl-acyl carrier 93.1 0.75 2.6E-05 40.4 11.0 85 36-140 30-117 (271)
418 3kvo_A Hydroxysteroid dehydrog 93.1 1 3.4E-05 41.7 12.2 88 36-139 46-138 (346)
419 2z1m_A GDP-D-mannose dehydrata 93.1 0.33 1.1E-05 43.5 8.6 31 36-67 4-34 (345)
420 3gvc_A Oxidoreductase, probabl 93.0 0.27 9.1E-06 43.9 7.9 80 36-139 30-112 (277)
421 3dfu_A Uncharacterized protein 93.0 0.16 5.5E-06 45.0 6.2 114 35-162 6-131 (232)
422 4g65_A TRK system potassium up 92.9 0.16 5.5E-06 49.2 6.7 158 35-204 3-174 (461)
423 1xdw_A NAD+-dependent (R)-2-hy 92.9 0.22 7.6E-06 46.1 7.4 62 35-115 146-207 (331)
424 2hcy_A Alcohol dehydrogenase 1 92.9 0.31 1E-05 44.7 8.2 31 36-67 171-201 (347)
425 4dvj_A Putative zinc-dependent 92.8 0.23 7.9E-06 46.1 7.4 95 36-138 173-272 (363)
426 1rkx_A CDP-glucose-4,6-dehydra 92.8 0.73 2.5E-05 41.8 10.7 33 35-68 9-41 (357)
427 1y7t_A Malate dehydrogenase; N 92.8 0.18 6.2E-06 46.2 6.6 72 34-114 3-88 (327)
428 1q0q_A 1-deoxy-D-xylulose 5-ph 92.8 0.9 3.1E-05 43.2 11.3 36 34-69 8-44 (406)
429 4f6c_A AUSA reductase domain p 92.7 0.35 1.2E-05 45.4 8.6 34 35-69 69-102 (427)
430 3nep_X Malate dehydrogenase; h 92.6 0.11 3.9E-06 47.9 4.9 33 36-70 1-34 (314)
431 3orf_A Dihydropteridine reduct 92.6 0.49 1.7E-05 41.2 8.9 37 32-70 19-55 (251)
432 1xg5_A ARPG836; short chain de 92.6 0.93 3.2E-05 39.8 10.8 85 36-139 33-120 (279)
433 4ibo_A Gluconate dehydrogenase 92.6 0.5 1.7E-05 41.9 9.0 105 13-140 2-113 (271)
434 3qiv_A Short-chain dehydrogena 92.6 1.2 4.2E-05 38.3 11.4 84 36-140 10-96 (253)
435 1udb_A Epimerase, UDP-galactos 92.4 0.48 1.6E-05 42.6 8.8 30 36-66 1-30 (338)
436 3tjr_A Short chain dehydrogena 92.4 1.2 4.1E-05 39.9 11.4 84 36-140 32-118 (301)
437 1yb1_A 17-beta-hydroxysteroid 92.4 0.91 3.1E-05 39.9 10.4 85 35-140 31-118 (272)
438 4f6l_B AUSA reductase domain p 92.3 0.17 5.7E-06 49.0 5.9 35 34-69 149-183 (508)
439 1sny_A Sniffer CG10964-PA; alp 92.2 0.55 1.9E-05 40.8 8.7 85 35-140 21-112 (267)
440 1hye_A L-lactate/malate dehydr 92.2 0.099 3.4E-06 47.9 4.0 34 36-69 1-34 (313)
441 3i4f_A 3-oxoacyl-[acyl-carrier 92.2 0.73 2.5E-05 40.1 9.5 86 34-139 6-94 (264)
442 2o4c_A Erythronate-4-phosphate 92.2 0.16 5.5E-06 48.2 5.5 61 35-115 116-176 (380)
443 3qwb_A Probable quinone oxidor 92.1 0.19 6.4E-06 45.9 5.7 32 36-68 150-181 (334)
444 1y8q_B Anthracycline-, ubiquit 92.1 0.48 1.6E-05 47.9 9.1 97 36-140 18-144 (640)
445 1u8x_X Maltose-6'-phosphate gl 92.1 0.85 2.9E-05 44.4 10.6 173 16-210 10-208 (472)
446 2zqz_A L-LDH, L-lactate dehydr 92.1 0.16 5.4E-06 47.0 5.2 75 32-114 6-84 (326)
447 3osu_A 3-oxoacyl-[acyl-carrier 92.0 1 3.5E-05 38.9 10.2 84 35-140 4-92 (246)
448 3pk0_A Short-chain dehydrogena 92.0 0.8 2.7E-05 40.1 9.5 84 36-139 11-97 (262)
449 3p7m_A Malate dehydrogenase; p 92.0 0.31 1.1E-05 45.0 7.1 33 35-70 5-38 (321)
450 3gaz_A Alcohol dehydrogenase s 92.0 0.13 4.4E-06 47.4 4.4 98 36-139 152-249 (343)
451 3n74_A 3-ketoacyl-(acyl-carrie 91.9 0.57 2E-05 40.7 8.4 81 36-140 10-93 (261)
452 3v8b_A Putative dehydrogenase, 91.9 0.67 2.3E-05 41.3 9.0 83 36-139 29-114 (283)
453 3oid_A Enoyl-[acyl-carrier-pro 91.8 1.3 4.5E-05 38.6 10.7 84 36-139 5-91 (258)
454 4eye_A Probable oxidoreductase 91.7 0.12 4.2E-06 47.5 4.0 32 36-68 161-192 (342)
455 3tzq_B Short-chain type dehydr 91.7 0.69 2.4E-05 40.8 8.8 81 36-140 12-95 (271)
456 1lld_A L-lactate dehydrogenase 91.7 0.29 1E-05 44.3 6.5 34 34-70 6-41 (319)
457 3oet_A Erythronate-4-phosphate 91.6 0.24 8.2E-06 47.0 5.9 59 36-114 120-178 (381)
458 3l77_A Short-chain alcohol deh 91.5 0.46 1.6E-05 40.6 7.2 85 36-140 3-90 (235)
459 3d7l_A LIN1944 protein; APC893 91.4 0.22 7.6E-06 41.4 5.0 30 35-66 3-32 (202)
460 3tfo_A Putative 3-oxoacyl-(acy 91.4 1.6 5.3E-05 38.6 10.9 82 36-140 5-91 (264)
461 3sc4_A Short chain dehydrogena 91.4 2 6.8E-05 38.1 11.6 89 36-139 10-102 (285)
462 1qor_A Quinone oxidoreductase; 91.4 0.15 5.2E-06 46.3 4.3 31 36-67 142-172 (327)
463 3lp8_A Phosphoribosylamine-gly 91.4 0.25 8.4E-06 47.4 5.9 115 33-159 19-138 (442)
464 2b4q_A Rhamnolipids biosynthes 91.3 0.69 2.4E-05 41.0 8.4 82 36-139 30-114 (276)
465 1geg_A Acetoin reductase; SDR 91.3 1.9 6.5E-05 37.3 11.2 84 35-139 2-88 (256)
466 3gk3_A Acetoacetyl-COA reducta 91.3 1.3 4.5E-05 38.8 10.2 92 29-140 17-113 (269)
467 1h5q_A NADP-dependent mannitol 91.3 0.94 3.2E-05 39.1 9.1 84 36-139 15-101 (265)
468 2p4h_X Vestitone reductase; NA 91.3 0.54 1.8E-05 41.8 7.7 31 36-67 2-32 (322)
469 1wma_A Carbonyl reductase [NAD 91.2 1 3.4E-05 38.9 9.3 33 35-67 4-36 (276)
470 2y1e_A 1-deoxy-D-xylulose 5-ph 91.2 0.32 1.1E-05 46.1 6.3 98 35-136 21-135 (398)
471 2egg_A AROE, shikimate 5-dehyd 91.2 0.17 5.9E-06 46.0 4.4 125 35-179 141-274 (297)
472 3kb6_A D-lactate dehydrogenase 91.2 0.48 1.6E-05 44.0 7.5 62 35-114 141-202 (334)
473 4e6p_A Probable sorbitol dehyd 91.2 0.69 2.4E-05 40.3 8.2 81 36-140 9-92 (259)
474 1wly_A CAAR, 2-haloacrylate re 91.2 0.19 6.6E-06 45.8 4.7 31 36-67 147-177 (333)
475 3cxt_A Dehydrogenase with diff 91.2 1.3 4.5E-05 39.6 10.2 83 36-139 35-120 (291)
476 3tpc_A Short chain alcohol deh 91.1 1.6 5.5E-05 37.8 10.5 81 36-140 8-91 (257)
477 3sju_A Keto reductase; short-c 91.1 1.9 6.5E-05 38.1 11.2 84 36-140 25-111 (279)
478 2ehd_A Oxidoreductase, oxidore 91.1 1.2 4E-05 37.9 9.4 80 35-139 5-87 (234)
479 3ce6_A Adenosylhomocysteinase; 91.1 0.22 7.6E-06 48.8 5.3 67 35-117 274-340 (494)
480 2x0j_A Malate dehydrogenase; o 91.1 0.2 6.8E-06 45.8 4.6 33 36-70 1-34 (294)
481 4dmm_A 3-oxoacyl-[acyl-carrier 91.0 1.7 6E-05 38.2 10.8 85 36-140 29-116 (269)
482 4aj2_A L-lactate dehydrogenase 91.0 0.26 9E-06 45.8 5.5 38 31-70 15-53 (331)
483 2cfc_A 2-(R)-hydroxypropyl-COM 91.0 0.9 3.1E-05 38.9 8.7 85 35-139 2-89 (250)
484 3svt_A Short-chain type dehydr 91.0 2 6.8E-05 37.8 11.1 87 36-140 12-101 (281)
485 1tt5_B Ubiquitin-activating en 91.0 0.66 2.3E-05 44.7 8.4 33 35-69 40-72 (434)
486 2a35_A Hypothetical protein PA 90.9 0.19 6.6E-06 42.0 4.1 34 34-67 4-38 (215)
487 3pqe_A L-LDH, L-lactate dehydr 90.9 0.13 4.4E-06 47.7 3.3 34 35-70 5-39 (326)
488 4e4y_A Short chain dehydrogena 90.9 0.4 1.4E-05 41.5 6.3 34 35-69 4-37 (244)
489 1gz6_A Estradiol 17 beta-dehyd 90.9 2.8 9.7E-05 38.0 12.3 86 36-139 10-101 (319)
490 3r3j_A Glutamate dehydrogenase 90.9 0.44 1.5E-05 46.2 7.0 137 36-186 240-403 (456)
491 1z45_A GAL10 bifunctional prot 90.9 0.85 2.9E-05 45.8 9.5 32 35-67 11-42 (699)
492 3pi7_A NADH oxidoreductase; gr 90.8 1.2 4.1E-05 40.7 9.8 30 37-67 167-196 (349)
493 3ak4_A NADH-dependent quinucli 90.7 1.9 6.5E-05 37.4 10.6 80 36-139 13-95 (263)
494 3jyo_A Quinate/shikimate dehyd 90.7 0.18 6.2E-06 45.7 4.0 126 36-179 128-263 (283)
495 2ae2_A Protein (tropinone redu 90.7 3.4 0.00012 35.7 12.3 83 36-139 10-96 (260)
496 3ip1_A Alcohol dehydrogenase, 90.7 0.61 2.1E-05 43.8 7.8 94 36-138 215-320 (404)
497 3tqh_A Quinone oxidoreductase; 90.7 0.098 3.4E-06 47.6 2.2 123 36-181 154-284 (321)
498 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.6 1.2 4.1E-05 38.6 9.2 84 36-139 22-108 (274)
499 3s55_A Putative short-chain de 90.6 2.9 0.0001 36.6 11.9 93 36-139 11-108 (281)
500 2v6b_A L-LDH, L-lactate dehydr 90.6 0.64 2.2E-05 42.2 7.6 32 36-70 1-34 (304)
No 1
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=100.00 E-value=1.6e-76 Score=549.25 Aligned_cols=251 Identities=15% Similarity=0.189 Sum_probs=229.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVV 110 (300)
+|+||+|+||+|+||+.+++.+.++|+++|+|++|++ ..|+|+++++|+ .+.|+++++|++++++ ++|||
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~-~~~gv~v~~dl~~ll~------~aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGS-DFLGVRITDDPESAFS------NTEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTC-SCCSCBCBSCHHHHTT------SCSEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhcc-CcCCceeeCCHHHHhc------CCCEE
Confidence 4699999998899999999999999999999999964 368999999988 4789999999999984 79999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccC---CCCeE
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFH---YKNVE 187 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~---~~die 187 (300)
||||+|+++.+++..|+++|+|+|+|||||++++.++|+++|++ +|++||||||+|+|||+++++.++++ .||+|
T Consensus 93 IDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~--~~~~~a~N~SiGv~ll~~l~~~aa~~l~~~~die 170 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKY--TTIVKSGNMSLGVNLLANLVKRAAKALDDDFDIE 170 (288)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTT--SEEEECSCCCHHHHHHHHHHHHHHHHSCTTSEEE
T ss_pred EEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCc--CCEEEECCCcHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999987 99999999999999999998887765 47999
Q ss_pred EEEccC-CCCCCCchHHHHHHHHHHhcC-------CccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccC
Q 022250 188 IVESRP-NARDFPSPDATQIANNLSNLG-------QIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRP 259 (300)
Q Consensus 188 IiE~Hh-~K~DaPSGTA~~l~~~i~~~~-------~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~ 259 (300)
|+|+|| +|+|||||||++|++.|++.. ..|+|++..+ .|. +++|+|||+|+|+++|+|+|+|+++
T Consensus 171 IiE~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g---~r~----~~~i~i~s~R~g~ivg~h~V~f~~~ 243 (288)
T 3ijp_A 171 IYEMHHANKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTG---KRE----KGTIGFACSRGGTVIGDHSITFAGE 243 (288)
T ss_dssp EEEEECTTCCCSSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCCS---CCC----TTCEEEEEEECTTCCEEEEEEEEET
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHhCCCcccccccccccccC---CcC----CCCccEEEEECCCCCEEEEEEecCC
Confidence 999999 699999999999999997632 2466776543 442 4799999999999999999999999
Q ss_pred CcEEEEEEEeCCccccHHHHHHHHHHhhccCCeeeeccccC
Q 022250 260 GEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300 (300)
Q Consensus 260 ~E~iel~H~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL 300 (300)
+|+|||+|+|+||++||+|||+||+||.+|++|+|+|+|||
T Consensus 244 ~e~i~i~H~a~sR~~Fa~Ga~~Aa~~l~~~~~g~y~m~dvL 284 (288)
T 3ijp_A 244 NERIVLSHIAQERSIFANGALKAALWAKNHENGLYSMLDVL 284 (288)
T ss_dssp TEEEEEEEEECCTHHHHHHHHHHHHHHTTCCSEEECHHHHH
T ss_pred CcEEEEEEEeCcHHHHHHHHHHHHHHHhcCCCcEEeHHHHh
Confidence 99999999999999999999999999999999999999986
No 2
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=8.2e-76 Score=541.60 Aligned_cols=253 Identities=21% Similarity=0.293 Sum_probs=228.8
Q ss_pred CCCC-cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 31 PPQS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 31 ~~~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
|..| ||||+|+||+|+||+.+++.+.++++++|++++|++ ..|+|+++++|.. + ++++++|++++++ +
T Consensus 2 ~~~M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~-~-gv~v~~dl~~ll~------~ 73 (272)
T 4f3y_A 2 PGSMSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ-T-GVALTDDIERVCA------E 73 (272)
T ss_dssp ----CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC-C-SCBCBCCHHHHHH------H
T ss_pred CCCccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC-C-CceecCCHHHHhc------C
Confidence 3334 699999998899999999999999999999999964 3688999998873 4 9999999999985 6
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccC---C
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFH---Y 183 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~---~ 183 (300)
+|||||||+|+++.+++..|+++|+|+|+|||||++++.++|+++|++ +|++||||||+|+|||+++++.++++ .
T Consensus 74 ~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~--~~vv~a~N~s~Gv~l~~~~~~~aa~~l~~~ 151 (272)
T 4f3y_A 74 ADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEK--IALVFSANMSVGVNVTMKLLEFAAKQFAQG 151 (272)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTT--SEEEECSCCCHHHHHHHHHHHHHHHHTSSS
T ss_pred CCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcc--CCEEEECCCCHHHHHHHHHHHHHHHhcCcC
Confidence 899999999999999999999999999999999999999999999987 89999999999999999998888775 3
Q ss_pred CCeEEEEccC-CCCCCCchHHHHHHHHHHhcC-------CccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEE
Q 022250 184 KNVEIVESRP-NARDFPSPDATQIANNLSNLG-------QIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVY 255 (300)
Q Consensus 184 ~dieIiE~Hh-~K~DaPSGTA~~l~~~i~~~~-------~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~ 255 (300)
||+||+|+|| +|+|||||||++|++.|++.. ..|+|++..+ .|+ +++|+|||+|+|+++|+|+|+
T Consensus 152 ~diei~E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g---~r~----~~~i~i~s~R~g~ivg~h~v~ 224 (272)
T 4f3y_A 152 YDIEIIEAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTG---ERD----PSTIGFSAIRGGDIVGDHTVL 224 (272)
T ss_dssp CEEEEEEEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCC---SCC----TTCEEEEEEECTTCCEEEEEE
T ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccC---CCC----CCccCEEEEECCCCceEEEEE
Confidence 7999999999 699999999999999998732 2467776543 554 489999999999999999999
Q ss_pred EccCCcEEEEEEEeCCccccHHHHHHHHHHhhccCCeeeeccccC
Q 022250 256 FSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300 (300)
Q Consensus 256 f~~~~E~iel~H~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL 300 (300)
|++++|+|||+|+|+||++||+|||+||+|+.+|++|+|+|+|||
T Consensus 225 f~~~~e~i~i~H~a~~R~~fa~Ga~~Aa~~~~~~~~g~y~m~dvl 269 (272)
T 4f3y_A 225 FAGIGERIEITHKSASRVSYAQGALRAARFLAGRDAGFFDMQDVL 269 (272)
T ss_dssp EECSSEEEEEEEEECCTHHHHHHHHHHHHHHHTCSSEEECHHHHT
T ss_pred EcCCCcEEEEEEEeCcHHHHHHHHHHHHHHHhcCCCcEEcHHHHh
Confidence 999999999999999999999999999999999999999999997
No 3
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=5.6e-73 Score=514.91 Aligned_cols=234 Identities=18% Similarity=0.291 Sum_probs=211.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
||||+|+|| |+||+.+++.+.+.++ +|++++|++.. ...++++++|+++++ ++||+||||
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~~-----------~~~gv~v~~dl~~l~-------~~DVvIDft 62 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTPK-----------ATTPYQQYQHIADVK-------GADVAIDFS 62 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSCC-------------CCSCBCSCTTTCT-------TCSEEEECS
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCcc-----------ccCCCceeCCHHHHh-------CCCEEEEeC
Confidence 699999999 9999999999999999 99999997531 246789999998874 689999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccCC--CCeEEEEcc
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHY--KNVEIVESR 192 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~--~dieIiE~H 192 (300)
+|+++.++++ +++|+|+|+|||||++++.++|+++|++ +|++||||||+|||||+++++.+++++ ||+||+|+|
T Consensus 63 ~p~a~~~~~~--l~~g~~vVigTTG~s~e~~~~l~~aa~~--~~v~~a~N~S~Gv~l~~~~~~~aa~~l~~~dieI~E~H 138 (243)
T 3qy9_A 63 NPNLLFPLLD--EDFHLPLVVATTGEKEKLLNKLDELSQN--MPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAH 138 (243)
T ss_dssp CHHHHHHHHT--SCCCCCEEECCCSSHHHHHHHHHHHTTT--SEEEECSSCCHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred ChHHHHHHHH--HhcCCceEeCCCCCCHHHHHHHHHHHhc--CCEEEECCccHHHHHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 9999999997 9999999999999999999999999988 999999999999999999999988876 899999999
Q ss_pred C-CCCCCCchHHHHHHHHHHhcC----CccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccCCcEEEEEE
Q 022250 193 P-NARDFPSPDATQIANNLSNLG----QIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267 (300)
Q Consensus 193 h-~K~DaPSGTA~~l~~~i~~~~----~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~~E~iel~H 267 (300)
| +|+|||||||++|++.|..++ ..|+|++..+ .|. +++|+|||+|+|+++|+|+|+|++++|+|||+|
T Consensus 139 H~~K~DaPSGTA~~la~~i~~~~~~~~~~~~r~~~~~---~r~----~~~i~i~s~R~g~ivg~h~v~f~~~~e~i~i~H 211 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNE---KRQ----PQDIGIHSIRGGTIVGEHEVLFAGTDETIQITH 211 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHHHHHSTTCEEECCCTTTCC---CCC----TTEEEEEEEECTTCCEEEEEEEEETTEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHhcCcccccccccccccC---Ccc----CCcceEEEEECCCCcEEEEEEEcCCCcEEEEEE
Confidence 9 699999999999999993333 3466765432 442 479999999999999999999999999999999
Q ss_pred EeCCccccHHHHHHHHHHhhccCCeeeecccc
Q 022250 268 DITDVQSLMPGLILAIRKVVHLKNLVYGLEKF 299 (300)
Q Consensus 268 ~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dv 299 (300)
+|+||++||+|||+||+||.+|++|+|+|+||
T Consensus 212 ~a~sR~~Fa~Ga~~Aa~~l~~~~~g~y~m~dv 243 (243)
T 3qy9_A 212 RAQSKDIFANGAIQAAERLVNKPNGFYTFDNL 243 (243)
T ss_dssp EESCTHHHHHHHHHHHHHHTTSCSEEECTTTC
T ss_pred EeCcHHHHHHHHHHHHHHHccCCCcEeccccC
Confidence 99999999999999999999999999999997
No 4
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=100.00 E-value=4e-71 Score=510.75 Aligned_cols=250 Identities=20% Similarity=0.303 Sum_probs=225.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC---CCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS---VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~---~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
+|||+|+||+|+||+.+++.+.+.++++|++++|++. .|+++++++|+ .+.++++++|++++++ ++||||
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~-~~~~v~~~~dl~~~l~------~~DvVI 77 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGA-GKTGVTVQSSLDAVKD------DFDVFI 77 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSS-SCCSCCEESCSTTTTT------SCSEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCC-CcCCceecCCHHHHhc------CCCEEE
Confidence 5899999999999999999999899999999999743 37788888877 4678999999998884 789999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccC---CCCeEE
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFH---YKNVEI 188 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~---~~dieI 188 (300)
|||+|+++.+++..|+++|+|+|+|||||++++.++|.+++++ ++++++||||+|+|+++++++.++++ .||+||
T Consensus 78 Dft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~--~~vv~a~N~siGvn~~~~l~~~aa~~~~~~~diei 155 (273)
T 1dih_A 78 DFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD--IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEI 155 (273)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTT--SCEEECSCCCHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred EcCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCC--CCEEEEecCcHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 9999999999999999999999999999999999999999877 89999999999999999888777765 489999
Q ss_pred EEccC-CCCCCCchHHHHHHHHHHhc-C------CccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccCC
Q 022250 189 VESRP-NARDFPSPDATQIANNLSNL-G------QIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 260 (300)
Q Consensus 189 iE~Hh-~K~DaPSGTA~~l~~~i~~~-~------~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~~ 260 (300)
+|+|| +|+|||||||+++++.|++. + ..++|++..+ .|. +++|+|||+|+|+++|+|+|+|++++
T Consensus 156 iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~---~r~----~~~i~i~s~R~g~vvg~h~v~f~~~g 228 (273)
T 1dih_A 156 IEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTG---ERV----PGTIGFATVRAGDIVGEHTAMFADIG 228 (273)
T ss_dssp EEEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCC---SCC----TTCEEEEEEECTTCCEEEEEEEEETT
T ss_pred EEeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccC---CCC----CCcceEEEEeCCCCCccEEEEEcCCC
Confidence 99999 69999999999999999763 2 2456666543 442 47899999999999999999999999
Q ss_pred cEEEEEEEeCCccccHHHHHHHHHHhhccCCeeeeccccC
Q 022250 261 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 300 (300)
Q Consensus 261 E~iel~H~a~sR~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL 300 (300)
|+|||+|+|+||++||+||++||+||.+|++|+|+|+|||
T Consensus 229 e~i~i~H~a~~R~~fa~Ga~~Aa~~l~~~~~g~y~m~dvl 268 (273)
T 1dih_A 229 ERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVL 268 (273)
T ss_dssp EEEEEEEEECSTHHHHHHHHHHHHHHTTCCSSEECHHHHT
T ss_pred cEEEEEEEeCCHHHHHHHHHHHHHHHhcCCCCEEcHHHhh
Confidence 9999999999999999999999999999999999999987
No 5
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=100.00 E-value=9.6e-70 Score=494.21 Aligned_cols=233 Identities=28% Similarity=0.449 Sum_probs=207.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||+|+||+|+||+.+++.+.+.++++|++++|+. +|+++++. .++|||||||+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------~dl~~~~~-----~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------DPLSLLTD-----GNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------CCTHHHHH-----TTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------CCHHHHhc-----cCCcEEEEccC
Confidence 59999999999999999999888999999999853 13456653 47899999999
Q ss_pred chhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhC-CCeEEEcCCCcHHHHHHHHHHHHhccCCCCeEEEEccC-
Q 022250 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA-SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRP- 193 (300)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~-~i~iv~a~N~SiGv~ll~~~a~~~~~~~~dieIiE~Hh- 193 (300)
|+++.+++..|+++|+|+|+|||||++++.++|+++|+++ ++|++++||||+|+|+|+++++.++++++|+||+|+||
T Consensus 55 p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~HH~ 134 (245)
T 1p9l_A 55 PDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHP 134 (245)
T ss_dssp TTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEECT
T ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECccc
Confidence 9999999999999999999999999999999999999976 89999999999999999999999999888999999999
Q ss_pred CCCCCCchHHHHHHHHHHhcCC------ccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccCCcEEEEEE
Q 022250 194 NARDFPSPDATQIANNLSNLGQ------IYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKH 267 (300)
Q Consensus 194 ~K~DaPSGTA~~l~~~i~~~~~------~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~~E~iel~H 267 (300)
+|+|||||||++|++.|++.+. .+.|++.. +.|+.. .++|+|||+|+|+++|+|+|+|++++|+|||+|
T Consensus 135 ~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~---g~r~~~--~~~i~i~s~R~g~ivg~h~V~f~~~~e~i~i~H 209 (245)
T 1p9l_A 135 HKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLP---GARGAD--VDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRH 209 (245)
T ss_dssp TCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCT---TTTCEE--ETTEEEEEEECTTCCEEEEEEEEETTEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHhhccccccccccccccc---CCCCCC--CCcceEEEEECCCCCeEEEEEEcCCCcEEEEEE
Confidence 6999999999999999987432 23344433 345432 268999999999999999999999999999999
Q ss_pred EeCCccccHHHHHHHHHHhhccCCe-eeeccccC
Q 022250 268 DITDVQSLMPGLILAIRKVVHLKNL-VYGLEKFL 300 (300)
Q Consensus 268 ~a~sR~~Fa~Gal~Aa~~l~~~~~g-~y~m~dvL 300 (300)
+|+||++||+||++||+||.+ ++| +|+|+|||
T Consensus 210 ~a~sR~~Fa~Ga~~Aa~~l~~-~~Gl~y~m~dvl 242 (245)
T 1p9l_A 210 DSLDRTSFVPGVLLAVRRIAE-RPGLTVGLEPLL 242 (245)
T ss_dssp EECSGGGGHHHHHHHHHHGGG-SCEEEESSHHHH
T ss_pred EeCchhhhHHHHHHHHHHHhc-CCCCEEcHHHhh
Confidence 999999999999999999995 568 69999986
No 6
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=4.6e-70 Score=487.45 Aligned_cols=210 Identities=23% Similarity=0.311 Sum_probs=193.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-||.+|+||+|||||.+++.+ +.++++|++++|++. + ++ + .++||+||||
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~~---~----------------~~----l------~~~DVvIDFT 61 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVNG---V----------------EE----L------DSPDVVIDFS 61 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETTE---E----------------EE----C------SCCSEEEECS
T ss_pred cceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCCC---c----------------cc----c------cCCCEEEECC
Confidence 389999999999999998864 688999999998641 0 01 1 2589999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccCC--CCeEEEEcc
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHY--KNVEIVESR 192 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~--~dieIiE~H 192 (300)
.|+++.+++++|+++|+|+|+|||||++++.+.|++++++ +|+++|||||+|||||+++++.+++++ ||+||+|+|
T Consensus 62 ~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~--~~vv~apNfSlGvnll~~l~~~aA~~l~~ydiEIiE~H 139 (228)
T 1vm6_A 62 SPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE--VPVVQAYNFSIGINVLKRFLSELVKVLEDWDVEIVETH 139 (228)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT--SEEEECSCCCHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh--CCEEEeccccHHHHHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 9999999999999999999999999999999999999877 999999999999999999988888764 899999999
Q ss_pred C-CCCCCCchHHHHHHHHHHhcCCccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccCCcEEEEEEEeCC
Q 022250 193 P-NARDFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITD 271 (300)
Q Consensus 193 h-~K~DaPSGTA~~l~~~i~~~~~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~~E~iel~H~a~s 271 (300)
| +|+|||||||++|++.| +++|+|||+|+|++||+|+|+|++++|+|||+|+|+|
T Consensus 140 H~~K~DAPSGTAl~lae~i------------------------~~~I~i~svR~g~ivg~H~V~F~~~gE~iei~H~a~s 195 (228)
T 1vm6_A 140 HRFKKDAPSGTAILLESAL------------------------GKSVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAIS 195 (228)
T ss_dssp CTTCCCSSCHHHHHHHHHT------------------------TSCCCEEEEECTTCCCEEEEEEECSSEEEEEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHhc------------------------ccCCCEEEEECCCCcEEEEEEEeCCCcEEEEEEEeCc
Confidence 9 69999999999999987 1579999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhccCCeeeeccccC
Q 022250 272 VQSLMPGLILAIRKVVHLKNLVYGLEKFL 300 (300)
Q Consensus 272 R~~Fa~Gal~Aa~~l~~~~~g~y~m~dvL 300 (300)
|++||+|||+||+||.+|++|+|+|+|||
T Consensus 196 R~~Fa~Gal~Aa~~l~~~~~G~Y~m~dvL 224 (228)
T 1vm6_A 196 RTVFAIGALKAAEFLVGKDPGMYSFEEVI 224 (228)
T ss_dssp THHHHHHHHHHHHHHTTCCSEEECHHHHH
T ss_pred HHHhHhHHHHHHHHHhcCCCCEecHHHHh
Confidence 99999999999999999999999999986
No 7
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.83 E-value=7.2e-22 Score=185.16 Aligned_cols=247 Identities=11% Similarity=0.019 Sum_probs=164.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |+||+.+++.+.+.++++|++++|++... .+ . +++++++|+++++ .++|+||++|
T Consensus 3 ~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~----~~----~-~gv~~~~d~~~ll------~~~DvViiat 66 (320)
T 1f06_A 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL----DT----K-TPVFDVADVDKHA------DDVDVLFLCM 66 (320)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC----SS----S-SCEEEGGGGGGTT------TTCSEEEECS
T ss_pred CCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHH----hh----c-CCCceeCCHHHHh------cCCCEEEEcC
Confidence 689999998 99999999999988999999999976311 11 1 5677888998876 3799999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCC-CCCHHHH-HHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhcc-CC----CCeE
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLETV-SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASF-HY----KNVE 187 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~-~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~-~~----~die 187 (300)
+|..+.+++..++++|+++|++|| +.+.++. ++|.+++++++.-.++..||+.|.+.+.++...... .. +..+
T Consensus 67 p~~~h~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l~~~l~~~~~~~g~~~~~~~~ 146 (320)
T 1f06_A 67 GSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSINRVYAAAVLAEHQQHTFWGP 146 (320)
T ss_dssp CTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHHHHHHHHHHCSSEEEEEEECS
T ss_pred CcHHHHHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHHHHHHhhccccccceecccCC
Confidence 999999999999999999999998 5677777 899999998774555556999999888777654221 11 1235
Q ss_pred EEEccC-CCCCCCchHHHHHH------HHHHh----cCCc-ccc--CccccccccccccccCCCeeEEEEEcCCCC----
Q 022250 188 IVESRP-NARDFPSPDATQIA------NNLSN----LGQI-YNR--EDISTDVKARGQVLGEDGVRVHSMVLPGLP---- 249 (300)
Q Consensus 188 IiE~Hh-~K~DaPSGTA~~l~------~~i~~----~~~~-~~r--~~~~~~~~~rg~~~~~~~i~i~s~R~g~iv---- 249 (300)
..|.|| .+.++++|++-.++ +.+.. .... ..+ +........+|.++ .+|..++.|.++.+
T Consensus 147 ~~~~~~~~~~~~~~gi~~a~g~~i~~e~~ld~v~~~~~p~~~~~d~~~~~~~~~~eG~d~--~~i~~~~~~~~~~~a~yd 224 (320)
T 1f06_A 147 GLSQGHSDALRRIPGVQKAVQYTLPSEDALEKARRGEAGDLTGKQTHKRQCFVVADAADH--ERIENDIRTMPDYFVGYE 224 (320)
T ss_dssp EECHHHHHHHHTSTTCSEEEEEEEECHHHHHHHHHTCCTTCCHHHHEEEEEEEECCGGGH--HHHHHHHHTCTTTTTTSE
T ss_pred CcccccccchhhcCchhhhhhcccCchHHHHHHhccCCCccchhhhhhceEEEEeCCcCh--HHHHHHHHhcccccCCCc
Confidence 678887 68888887532111 11111 1100 000 00000001112211 22333333333222
Q ss_pred --------------------eeEEEEE---ccCCcEEEEEEEeCC-ccccHHHHHHHHHH----hhccCCeeeecccc
Q 022250 250 --------------------SSTTVYF---SRPGEVYSIKHDITD-VQSLMPGLILAIRK----VVHLKNLVYGLEKF 299 (300)
Q Consensus 250 --------------------g~H~V~f---~~~~E~iel~H~a~s-R~~Fa~Gal~Aa~~----l~~~~~g~y~m~dv 299 (300)
|.|.+.. +.+.++|+++.+..+ -..-|.=++.|+++ +..-+||+|+|-|+
T Consensus 225 ~~v~~~~~~~l~~~~~~~~~g~~v~~~~~~g~~~~~~~~~~~~~~~~~~ta~~~v~~~~~~~~~~~~~~~G~~t~~d~ 302 (320)
T 1f06_A 225 VEVNFIDEATFDSEHTGMPHGGHVITTGDTGGFNHTVEYILKLDRNPDFTASSQIAFGRAAHRMKQQGQSGAFTVLEV 302 (320)
T ss_dssp EEEEECCHHHHHHHSSCCCEEEEEEEEEESSSCEEEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCEEECGGGS
T ss_pred eEEEEEchHHhhhhhcCCCCCcEEEEeecCCCCceeEEEEecCCCCcchhhHHHHHHHHHHHHHHhcCCCCCcccccC
Confidence 4453333 334555888877753 33445567788888 88889999999986
No 8
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=99.72 E-value=3.2e-17 Score=153.93 Aligned_cols=147 Identities=17% Similarity=0.103 Sum_probs=117.7
Q ss_pred CCcceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccccCCccEE
Q 022250 33 QSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVV 110 (300)
|.||||||+|+ |+||+. ++..+.+.++++|++++|++. ..+.+++ .++|++ +|+|++++++ +.++|+|
T Consensus 21 ~~mirigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a---~~~g~~~~y~d~~ell~----~~~iDaV 90 (350)
T 4had_A 21 QSMLRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDL--TRAREMA---DRFSVPHAFGSYEEMLA----SDVIDAV 90 (350)
T ss_dssp -CCEEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSH--HHHHHHH---HHHTCSEEESSHHHHHH----CSSCSEE
T ss_pred cCccEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCeeeCCHHHHhc----CCCCCEE
Confidence 56899999998 999987 578888899999999999763 2334444 456775 7999999997 3689999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeE
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVE 187 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~die 187 (300)
+.+|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++.+.+.-|+ +..+..++++.+. +..-++.
T Consensus 91 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~--G~iG~i~ 168 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDE--GAIGSLR 168 (350)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT--TTTSSEE
T ss_pred EEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhc--CCCCcce
Confidence 9999999999999999999999999999 899999999999999999998888774 5555555555532 1233555
Q ss_pred EEEc
Q 022250 188 IVES 191 (300)
Q Consensus 188 IiE~ 191 (300)
-++.
T Consensus 169 ~i~~ 172 (350)
T 4had_A 169 HVQG 172 (350)
T ss_dssp EEEE
T ss_pred eeeE
Confidence 5554
No 9
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=99.69 E-value=1.3e-16 Score=150.66 Aligned_cols=145 Identities=9% Similarity=0.004 Sum_probs=113.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHh-------cCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccccCC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTK-------ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~-------~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~ 106 (300)
++||||+|+ |.||+.+++.+.. .++++|++++|++. ..+..++ .+++++ +|+|++++++ +.+
T Consensus 25 kirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a---~~~g~~~~y~d~~ell~----~~~ 94 (393)
T 4fb5_A 25 PLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANA--GLAEARA---GEFGFEKATADWRALIA----DPE 94 (393)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHH---HHHTCSEEESCHHHHHH----CTT
T ss_pred CccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCH--HHHHHHH---HHhCCCeecCCHHHHhc----CCC
Confidence 599999998 9999999987654 36889999999764 2333343 356764 7999999997 368
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCC
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHY 183 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~ 183 (300)
+|+|+.+|++..+.+.+..|+++||||+|++| +.+.+|.++|.++|+++++.+.+.-|+ +..+.-+.++.+. +..
T Consensus 95 iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~--G~i 172 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGD--GVI 172 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHT--TTT
T ss_pred CcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHc--CCC
Confidence 99999999999999999999999999999999 899999999999999999999988875 4444444555432 223
Q ss_pred CCeEEEEc
Q 022250 184 KNVEIVES 191 (300)
Q Consensus 184 ~dieIiE~ 191 (300)
-++..++.
T Consensus 173 G~i~~v~~ 180 (393)
T 4fb5_A 173 GRVNHVRV 180 (393)
T ss_dssp CSEEEEEE
T ss_pred ccccceee
Confidence 45554543
No 10
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=99.69 E-value=2.4e-16 Score=149.20 Aligned_cols=148 Identities=16% Similarity=0.081 Sum_probs=118.3
Q ss_pred CcceEEEEcCCchHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCcCCCC--cceecCHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVV 110 (300)
|++||+|+|+ |.||+.+++.+. ..++++|++++|++. ..+..++ ..++ ++.|+|++++++ +.++|+|
T Consensus 22 ~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~ll~----~~~~D~V 91 (357)
T 3ec7_A 22 MTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVA--GRAQAAL---DKYAIEAKDYNDYHDLIN----DKDVEVV 91 (357)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSST--THHHHHH---HHHTCCCEEESSHHHHHH----CTTCCEE
T ss_pred CeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCH--HHHHHHH---HHhCCCCeeeCCHHHHhc----CCCCCEE
Confidence 4689999998 999999999998 779999999999764 2233333 2345 678999999997 3579999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeE-EEcCC--CcHHHHHHHHHHHHhccCCCCe
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGC-LIAPT--LSIGSILLQQAAISASFHYKNV 186 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~i-v~a~N--~SiGv~ll~~~a~~~~~~~~di 186 (300)
+.+|++..+.+.+..|+++|+||++++| +.+.++.++|.++|+++++.+ .++.| |...+..+.++.+. ...-++
T Consensus 92 ~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i 169 (357)
T 3ec7_A 92 IITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDS--GEIGQP 169 (357)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHH--TTTCSE
T ss_pred EEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhc--CCCCCe
Confidence 9999999999999999999999999999 899999999999999999876 56655 66666666666543 223456
Q ss_pred EEEEccC
Q 022250 187 EIVESRP 193 (300)
Q Consensus 187 eIiE~Hh 193 (300)
..+...+
T Consensus 170 ~~v~~~~ 176 (357)
T 3ec7_A 170 LMVHGRH 176 (357)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555533
No 11
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=99.68 E-value=6.2e-16 Score=144.48 Aligned_cols=145 Identities=15% Similarity=0.130 Sum_probs=117.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..++++ +|+|++++++ +.++|+|+.+
T Consensus 5 ~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~----~~~~D~V~i~ 74 (329)
T 3evn_A 5 KVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTL--ESAQAFA---NKYHLPKAYDKLEDMLA----DESIDVIYVA 74 (329)
T ss_dssp CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCS--STTCC------CCCCSCEESCHHHHHT----CTTCCEEEEC
T ss_pred ceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhc----CCCCCEEEEC
Confidence 589999998 999999999999889999999999754 2222333 456776 8999999996 3579999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|+||+|++| +.+.++.++|.++++++++.++.+.|+ ...+..+.++.+. ...-++..++
T Consensus 75 tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~v~ 152 (329)
T 3evn_A 75 TINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLAS--GEIGEVISIS 152 (329)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHT--TTTCSEEEEE
T ss_pred CCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhC--CCCCCeEEEE
Confidence 9999999999999999999999999 899999999999999999999988875 6776666666542 1233454444
Q ss_pred c
Q 022250 191 S 191 (300)
Q Consensus 191 ~ 191 (300)
.
T Consensus 153 ~ 153 (329)
T 3evn_A 153 S 153 (329)
T ss_dssp E
T ss_pred E
Confidence 4
No 12
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=99.68 E-value=1.4e-16 Score=150.41 Aligned_cols=146 Identities=11% Similarity=-0.004 Sum_probs=118.6
Q ss_pred CcceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
.++||+|+|+ |+||+ .+++.+.+.++++|++++|++. ..+..++ ..+|++.++|++++++ +.++|+|+.
T Consensus 26 ~~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~~ll~----~~~~D~V~i 95 (350)
T 3rc1_A 26 NPIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRW--DRAKRFT---ERFGGEPVEGYPALLE----RDDVDAVYV 95 (350)
T ss_dssp CCEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSH--HHHHHHH---HHHCSEEEESHHHHHT----CTTCSEEEE
T ss_pred CceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCH--HHHHHHH---HHcCCCCcCCHHHHhc----CCCCCEEEE
Confidence 3699999998 99999 7999999899999999999753 2233333 3568888999999996 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++|+||+|++| +.+.++.++|.++|+++++.+.++.| |...+..++++.+. +..-++..+
T Consensus 96 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~v 173 (350)
T 3rc1_A 96 PLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDE--GVIGEIRSF 173 (350)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHT--TTTCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhc--CCCCCeEEE
Confidence 99999999999999999999999999 89999999999999999998887775 46666666666542 123355555
Q ss_pred Ec
Q 022250 190 ES 191 (300)
Q Consensus 190 E~ 191 (300)
+.
T Consensus 174 ~~ 175 (350)
T 3rc1_A 174 AA 175 (350)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 13
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=99.68 E-value=3.9e-16 Score=145.71 Aligned_cols=146 Identities=14% Similarity=0.137 Sum_probs=118.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
||+||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..++++ |+|++++++ +.++|+|+.+
T Consensus 2 m~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~-~~~~~~~l~----~~~~D~V~i~ 70 (331)
T 4hkt_A 2 MTVRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFP--AAAEAIA---GAYGCE-VRTIDAIEA----AADIDAVVIC 70 (331)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHH---HHTTCE-ECCHHHHHH----CTTCCEEEEC
T ss_pred CceEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCH--HHHHHHH---HHhCCC-cCCHHHHhc----CCCCCEEEEe
Confidence 6899999998 999999999999889999999999753 2233333 356788 999999997 3589999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.+++..| |...+..+.++.+. ...-++..++
T Consensus 71 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~~ 148 (331)
T 4hkt_A 71 TPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDD--GRIGEVEMVT 148 (331)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHT--TTTCSEEEEE
T ss_pred CCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHc--CCCCceEEEE
Confidence 9999999999999999999999999 89999999999999999999888777 45555555555542 2234555555
Q ss_pred cc
Q 022250 191 SR 192 (300)
Q Consensus 191 ~H 192 (300)
.+
T Consensus 149 ~~ 150 (331)
T 4hkt_A 149 IT 150 (331)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 14
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=99.68 E-value=4.4e-16 Score=146.73 Aligned_cols=148 Identities=20% Similarity=0.164 Sum_probs=120.1
Q ss_pred CcceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
||+||+|+|+ |+||+ .++..+.+.++++|++++|++ ..+...+..+ ..++++|+|++++++ +.++|+|+.
T Consensus 1 M~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~---~~~~~~~~~~~~ll~----~~~~D~V~i 71 (349)
T 3i23_A 1 MTVKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFK---EKGVNFTADLNELLT----DPEIELITI 71 (349)
T ss_dssp CCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHH---TTTCEEESCTHHHHS----CTTCCEEEE
T ss_pred CeeEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhC---CCCCeEECCHHHHhc----CCCCCEEEE
Confidence 6899999998 99999 799989888999999999976 2333322221 146789999999997 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++||||+|++| ..+.++.++|.++|+++++.+.++.| |.....-+.++.+. ...-++.-+
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~ 149 (349)
T 3i23_A 72 CTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQ--GFLGEINEV 149 (349)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH--TTTCSEEEE
T ss_pred eCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--CCCCCEEEE
Confidence 99999999999999999999999999 89999999999999999999998888 56666556665543 223456666
Q ss_pred Ecc
Q 022250 190 ESR 192 (300)
Q Consensus 190 E~H 192 (300)
+.+
T Consensus 150 ~~~ 152 (349)
T 3i23_A 150 ETH 152 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 15
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=99.68 E-value=3.6e-16 Score=146.68 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=108.5
Q ss_pred cceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhccccc-CCccEEEE
Q 022250 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS-KARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~-~~~DVVID 112 (300)
++||+|+|+ |+||+ .+++.+.+.++++|++++|++. ...+++.|+|++++++ + .++|+|+.
T Consensus 25 ~~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~------------~~~g~~~~~~~~~ll~----~~~~vD~V~i 87 (330)
T 4ew6_A 25 PINLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHG------------TVEGVNSYTTIEAMLD----AEPSIDAVSL 87 (330)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSC------------CCTTSEEESSHHHHHH----HCTTCCEEEE
T ss_pred CceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCCh------------hhcCCCccCCHHHHHh----CCCCCCEEEE
Confidence 599999998 99999 7999999999999999999763 2457889999999997 3 47999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAA 176 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a 176 (300)
+|++..+.+.+..|+++||||+++|| +.+.++.++|.++|+++++.+.++.|+- ..+..+.+++
T Consensus 88 ~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 154 (330)
T 4ew6_A 88 CMPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFL 154 (330)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHH
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHH
Confidence 99999999999999999999999999 7999999999999999999988887754 3444444444
No 16
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=99.68 E-value=1e-15 Score=144.23 Aligned_cols=147 Identities=22% Similarity=0.224 Sum_probs=118.9
Q ss_pred CCCcceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEE
Q 022250 32 PQSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVV 110 (300)
|++++||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+.. ...++++|+|++++++ +.++|+|
T Consensus 4 M~~~~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av~d~~~--~~~~~-----~~~~~~~~~~~~~ll~----~~~vD~V 71 (352)
T 3kux_A 4 MADKIKVGLLGY-GYASKTFHAPLIMGTPGLELAGVSSSDA--SKVHA-----DWPAIPVVSDPQMLFN----DPSIDLI 71 (352)
T ss_dssp TTCCEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHT-----TCSSCCEESCHHHHHH----CSSCCEE
T ss_pred ccCCceEEEECC-CHHHHHHHHHHHhhCCCcEEEEEECCCH--HHHHh-----hCCCCceECCHHHHhc----CCCCCEE
Confidence 444699999998 999997 999999899999999999753 11111 2346788999999997 3679999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeE
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVE 187 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~die 187 (300)
+.+|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++.+.+..| |+..+.-+.++.+. ...-++.
T Consensus 72 ~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~ 149 (352)
T 3kux_A 72 VIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAE--GSLGNVV 149 (352)
T ss_dssp EECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH--TTTCSEE
T ss_pred EEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhc--CCCCceE
Confidence 9999999999999999999999999999 89999999999999999999888877 46666666666543 2234555
Q ss_pred EEEcc
Q 022250 188 IVESR 192 (300)
Q Consensus 188 IiE~H 192 (300)
-++.+
T Consensus 150 ~~~~~ 154 (352)
T 3kux_A 150 YFESH 154 (352)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 17
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=99.66 E-value=1.1e-15 Score=144.86 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=117.8
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCC-CcceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
|+||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+. ..+ ++++|+|++++++ +.++|+|+.
T Consensus 5 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~------~~~~~~~~~~~~~~ll~----~~~vD~V~i 71 (362)
T 3fhl_A 5 IIKTGLAAF-GMSGQVFHAPFISTNPHFELYKIVERSK--ELSK------ERYPQASIVRSFKELTE----DPEIDLIVV 71 (362)
T ss_dssp CEEEEESCC-SHHHHHTTHHHHHHCTTEEEEEEECSSC--CGGG------TTCTTSEEESCSHHHHT----CTTCCEEEE
T ss_pred ceEEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHH------HhCCCCceECCHHHHhc----CCCCCEEEE
Confidence 599999998 999997 899998899999999999764 1221 234 6789999999997 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++.+.+..| |+..+..+.++.+. ...-++.-+
T Consensus 72 ~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~v 149 (362)
T 3fhl_A 72 NTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAK--SLLGRLVEY 149 (362)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHT--TTTSSEEEE
T ss_pred eCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHc--CCCCCeEEE
Confidence 99999999999999999999999999 89999999999999999999998888 56666666666543 123355555
Q ss_pred Ecc
Q 022250 190 ESR 192 (300)
Q Consensus 190 E~H 192 (300)
+.+
T Consensus 150 ~~~ 152 (362)
T 3fhl_A 150 EST 152 (362)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 18
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=99.66 E-value=1.4e-15 Score=144.00 Aligned_cols=145 Identities=16% Similarity=0.174 Sum_probs=118.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.+++.+.+.++++|++++|++. ..+ +.+ ..+|+++|+|++++++ +.++|+|+.+|
T Consensus 5 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~-~~a---~~~g~~~~~~~~~ll~----~~~~D~V~i~t 73 (359)
T 3e18_A 5 KYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILA--EKR-EAA---AQKGLKIYESYEAVLA----DEKVDAVLIAT 73 (359)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSH--HHH-HHH---HTTTCCBCSCHHHHHH----CTTCCEEEECS
T ss_pred cCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCH--HHH-HHH---HhcCCceeCCHHHHhc----CCCCCEEEEcC
Confidence 589999998 999999999999999999999999753 112 222 3578889999999997 36899999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEEEc
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIVES 191 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIiE~ 191 (300)
++..+.+.+..|+++|+||+|++| +.+.++.++|.++|+++++.+.+..| |...+..++++.+. ...-++..++.
T Consensus 74 p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~~~~ 151 (359)
T 3e18_A 74 PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQ--KTIGEMFHLES 151 (359)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHH--TTTSSEEEEEE
T ss_pred CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHc--CCCCCeEEEEE
Confidence 999999999999999999999999 89999999999999999998888777 45555555555543 22345555555
Q ss_pred c
Q 022250 192 R 192 (300)
Q Consensus 192 H 192 (300)
+
T Consensus 152 ~ 152 (359)
T 3e18_A 152 R 152 (359)
T ss_dssp E
T ss_pred E
Confidence 3
No 19
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=99.66 E-value=5.5e-16 Score=143.87 Aligned_cols=141 Identities=18% Similarity=0.184 Sum_probs=111.5
Q ss_pred eecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 27 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 27 ~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
|+.||.++++||+|+|+ |+||+.+++.+.+.+++++++++|++. ..+..+. .. +++++|++++++ +.+
T Consensus 2 m~~p~~~~~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~~~--~~~~~~~---~~--~~~~~~~~~~l~----~~~ 69 (315)
T 3c1a_A 2 MSIPANNSPVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASSNP--DNLALVP---PG--CVIESDWRSVVS----APE 69 (315)
T ss_dssp -------CCEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEESCH--HHHTTCC---TT--CEEESSTHHHHT----CTT
T ss_pred CCCCCCCCcceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHH---hh--CcccCCHHHHhh----CCC
Confidence 66677677899999998 999999999999889999999999753 1222222 12 678899999985 257
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHh
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISA 179 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~ 179 (300)
+|+|+.+|++..+.+.+..|+++|+||++++| ..+.++.++|.++++++++.++.+.| |+..+..+.++.+.+
T Consensus 70 ~D~V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~l 145 (315)
T 3c1a_A 70 VEAVIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLTSI 145 (315)
T ss_dssp CCEEEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHHHH
T ss_pred CCEEEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHHHc
Confidence 99999999999999999999999999999998 78899999999999999998888765 566776677666533
No 20
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=99.66 E-value=4.1e-16 Score=146.98 Aligned_cols=146 Identities=11% Similarity=0.079 Sum_probs=117.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+++||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..++++.|+|++++++ +.++|+|+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~--~~~~~~~---~~~g~~~~~~~~~~l~----~~~~D~V~i~ 73 (354)
T 3db2_A 4 NPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTE--DKREKFG---KRYNCAGDATMEALLA----REDVEMVIIT 73 (354)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSH--HHHHHHH---HHHTCCCCSSHHHHHH----CSSCCEEEEC
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHcCCCCcCCHHHHhc----CCCCCEEEEe
Confidence 4689999998 999999999999889999999999753 2233333 3457788999999996 3679999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.+.++.|+ +..+..+.++.+. +..-++.-++
T Consensus 74 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~v~ 151 (354)
T 3db2_A 74 VPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDT--KEIGEVSSIE 151 (354)
T ss_dssp SCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHT--TTTCCEEEEE
T ss_pred CChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhc--CCCCCeEEEE
Confidence 9999999999999999999999999 899999999999999999988887765 4444445555432 2233555444
Q ss_pred c
Q 022250 191 S 191 (300)
Q Consensus 191 ~ 191 (300)
.
T Consensus 152 ~ 152 (354)
T 3db2_A 152 A 152 (354)
T ss_dssp E
T ss_pred E
Confidence 3
No 21
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=99.66 E-value=9.6e-16 Score=143.92 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=117.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCcCCCC--cceecCHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVV 110 (300)
||+||+|+|+ |.||+.+++.+. ..++++|++++|++. ..+..++ ..++ +++|+|++++++ +.++|+|
T Consensus 1 M~~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d~~~--~~~~~~~---~~~g~~~~~~~~~~~ll~----~~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTDVNQ--EAAQKVV---EQYQLNATVYPNDDSLLA----DENVDAV 70 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEECSSH--HHHHHHH---HHTTCCCEEESSHHHHHH----CTTCCEE
T ss_pred CeEEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHH---HHhCCCCeeeCCHHHHhc----CCCCCEE
Confidence 6799999998 999999999998 779999999999753 2223333 3455 678999999997 3579999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeE-EEcCC--CcHHHHHHHHHHHHhccCCCCe
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGC-LIAPT--LSIGSILLQQAAISASFHYKNV 186 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~i-v~a~N--~SiGv~ll~~~a~~~~~~~~di 186 (300)
+.+|++..+.+.+..|+++|+||++++| +.+.++.++|.++|+++++.+ .++.| |...+..+.++.+. ...-++
T Consensus 71 ~i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i 148 (344)
T 3mz0_A 71 LVTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDN--HVIGEP 148 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHT--TTTSSE
T ss_pred EECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHc--CCCCCc
Confidence 9999999999999999999999999999 899999999999999999877 56555 55565555555543 223456
Q ss_pred EEEEccC
Q 022250 187 EIVESRP 193 (300)
Q Consensus 187 eIiE~Hh 193 (300)
..++..+
T Consensus 149 ~~v~~~~ 155 (344)
T 3mz0_A 149 LMIHCAH 155 (344)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6565543
No 22
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=99.66 E-value=1e-15 Score=143.11 Aligned_cols=147 Identities=10% Similarity=-0.011 Sum_probs=117.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcC--CcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~--~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVV 110 (300)
||+||+|+|+ |+||+.+++.+.+.+ +++|++++|++. ..+..++ ..+++ .+|+|++++++ +.++|+|
T Consensus 1 M~~rigiiG~-G~ig~~~~~~l~~~~~~~~~l~av~d~~~--~~a~~~a---~~~~~~~~~~~~~~ll~----~~~vD~V 70 (334)
T 3ohs_X 1 MALRWGIVSV-GLISSDFTAVLQTLPRSEHQVVAVAARDL--SRAKEFA---QKHDIPKAYGSYEELAK----DPNVEVA 70 (334)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHTTSCTTTEEEEEEECSSH--HHHHHHH---HHHTCSCEESSHHHHHH----CTTCCEE
T ss_pred CccEEEEECc-hHHHHHHHHHHHhCCCCCeEEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhc----CCCCCEE
Confidence 6799999998 999999999998776 479999999753 2233333 34566 47999999997 3689999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeE
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVE 187 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~die 187 (300)
+.+|++..+.+.+..|+++|+||+|++| ..+.++.++|.++|+++++.+..+.| |...+..+.++.+. +..-++.
T Consensus 71 ~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~ 148 (334)
T 3ohs_X 71 YVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ--GTLGDLR 148 (334)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHH--TTTCSEE
T ss_pred EECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhc--CCCCCeE
Confidence 9999999999999999999999999999 89999999999999999999888776 45565556665543 2234666
Q ss_pred EEEcc
Q 022250 188 IVESR 192 (300)
Q Consensus 188 IiE~H 192 (300)
.++.+
T Consensus 149 ~v~~~ 153 (334)
T 3ohs_X 149 VARAE 153 (334)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 23
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=99.65 E-value=1.3e-15 Score=142.41 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=117.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..+++ .+|+|++++++ +.++|+|+.+
T Consensus 5 ~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~~~~~~~~~ll~----~~~~D~V~i~ 74 (330)
T 3e9m_A 5 KIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRL--ENAQKMA---KELAIPVAYGSYEELCK----DETIDIIYIP 74 (330)
T ss_dssp CEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSS--HHHHHHH---HHTTCCCCBSSHHHHHH----CTTCSEEEEC
T ss_pred eEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHH---HHcCCCceeCCHHHHhc----CCCCCEEEEc
Confidence 689999998 999999999999889999999999764 2333333 34677 47999999997 3689999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.+..+.| |...+..+.++.+. ...-++..++
T Consensus 75 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~i~ 152 (330)
T 3e9m_A 75 TYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQE--GGLGEILWVQ 152 (330)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHT--TTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhC--CCCCCeEEEE
Confidence 9999999999999999999999999 89999999999999999999888887 45555555665542 1233454444
Q ss_pred c
Q 022250 191 S 191 (300)
Q Consensus 191 ~ 191 (300)
.
T Consensus 153 ~ 153 (330)
T 3e9m_A 153 S 153 (330)
T ss_dssp E
T ss_pred E
Confidence 4
No 24
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=99.65 E-value=9e-16 Score=143.99 Aligned_cols=148 Identities=13% Similarity=0.128 Sum_probs=119.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+|+||+|+|+ |.||+.+++.+.+.++++|++++|++. ..+..++ ..+++++|+|++++++ +.++|+|+.+
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~~~l~----~~~~D~V~i~ 72 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFI--EGAQRLA---EANGAEAVASPDEVFA----RDDIDGIVIG 72 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHH---HTTTCEEESSHHHHTT----CSCCCEEEEC
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHcCCceeCCHHHHhc----CCCCCEEEEe
Confidence 4699999998 999999999999899999999999753 2233333 3567889999999996 3589999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|++|++++| +.+.++.++|.++++++++.+.+..|+- ..+..+.++.+. ...-++..++
T Consensus 73 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~v~ 150 (344)
T 3euw_A 73 SPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVAN--QEIGNLEQLV 150 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHT--TTTSSEEEEE
T ss_pred CCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhc--CCCCceEEEE
Confidence 9999999999999999999999999 8999999999999999999888877653 444444555432 2234566566
Q ss_pred ccC
Q 022250 191 SRP 193 (300)
Q Consensus 191 ~Hh 193 (300)
.+.
T Consensus 151 ~~~ 153 (344)
T 3euw_A 151 IIS 153 (344)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 25
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=99.65 E-value=1.2e-15 Score=143.89 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=118.3
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
+|+||+|+|+ |.||+.+++.+.+. ++++|++++|++. ..+..++ ..++++.|+|++++++ +.++|+|+.
T Consensus 12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~~---~~~~~~~~~~~~~ll~----~~~~D~V~i 81 (354)
T 3q2i_A 12 RKIRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDP--AALKAAV---ERTGARGHASLTDMLA----QTDADIVIL 81 (354)
T ss_dssp SCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSH--HHHHHHH---HHHCCEEESCHHHHHH----HCCCSEEEE
T ss_pred CcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCH--HHHHHHH---HHcCCceeCCHHHHhc----CCCCCEEEE
Confidence 4699999998 99999999999888 8999999999753 2223333 3457889999999996 358999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.++++.| |+..+..+.++.+. ...-++..+
T Consensus 82 ~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~v 159 (354)
T 3q2i_A 82 TTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQE--KRFGRIYMV 159 (354)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT--TTTCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhc--CCCCceEEE
Confidence 99999999999999999999999999 89999999999999999999988877 66665555555542 223355544
Q ss_pred Ec
Q 022250 190 ES 191 (300)
Q Consensus 190 E~ 191 (300)
+.
T Consensus 160 ~~ 161 (354)
T 3q2i_A 160 NV 161 (354)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 26
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=99.65 E-value=1.9e-15 Score=142.01 Aligned_cols=147 Identities=18% Similarity=0.123 Sum_probs=116.2
Q ss_pred CcceEEEEcCCchHHHH-HHH-HHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 34 SNIKVIINGAVKEIGRA-AVI-AVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~~-~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
||+||+|+|+ |+||+. ++. .+...++++|++++|++.. .+.... ...++++|+|++++++ +.++|+|+
T Consensus 1 m~~rvgiiG~-G~~g~~~~~~~~~~~~~~~~l~av~d~~~~--~~~~~~---~~~~~~~~~~~~~ll~----~~~~D~V~ 70 (345)
T 3f4l_A 1 MVINCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRRHAK--PEEQAP---IYSHIHFTSDLDEVLN----DPDVKLVV 70 (345)
T ss_dssp -CEEEEEECC-SHHHHHHTHHHHTTCTTTEEEEEEECSSCC--GGGGSG---GGTTCEEESCTHHHHT----CTTEEEEE
T ss_pred CceEEEEEec-CHHHHHHHHHHHHhcCCCeEEEEEEcCCHh--HHHHHH---hcCCCceECCHHHHhc----CCCCCEEE
Confidence 6799999998 999995 888 5577899999999997541 111111 2346789999999997 35799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEE
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEI 188 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieI 188 (300)
.+|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.+.+..| |.....-+.++.+. ...-++.-
T Consensus 71 i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~ 148 (345)
T 3f4l_A 71 VCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIES--GKLGEIVE 148 (345)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHH--STTCSEEE
T ss_pred EcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHhc--CCCCCeEE
Confidence 999999999999999999999999999 89999999999999999999988887 45666566666543 22345555
Q ss_pred EEcc
Q 022250 189 VESR 192 (300)
Q Consensus 189 iE~H 192 (300)
++.+
T Consensus 149 ~~~~ 152 (345)
T 3f4l_A 149 VESH 152 (345)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 27
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=99.64 E-value=7e-16 Score=144.88 Aligned_cols=147 Identities=11% Similarity=0.063 Sum_probs=117.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVVID 112 (300)
||+||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..++++ +|+|++++++ +.++|+|+.
T Consensus 1 M~~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~~~~~~~~~ll~----~~~~D~V~i 70 (344)
T 3ezy_A 1 MSLRIGVIGL-GRIGTIHAENLKMIDDAILYAISDVRE--DRLREMK---EKLGVEKAYKDPHELIE----DPNVDAVLV 70 (344)
T ss_dssp -CEEEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCH--HHHHHHH---HHHTCSEEESSHHHHHH----CTTCCEEEE
T ss_pred CeeEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHhCCCceeCCHHHHhc----CCCCCEEEE
Confidence 6799999998 999999999998889999999999753 2222333 245664 7999999997 358999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.+.++.|+ ...+..+.++.+. ...-++..+
T Consensus 71 ~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~~ 148 (344)
T 3ezy_A 71 CSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVEN--GTIGKPHVL 148 (344)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHT--TTTSSEEEE
T ss_pred cCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHc--CCCCCeEEE
Confidence 99999999999999999999999999 899999999999999999988887775 4444445555432 233466666
Q ss_pred Ecc
Q 022250 190 ESR 192 (300)
Q Consensus 190 E~H 192 (300)
+.+
T Consensus 149 ~~~ 151 (344)
T 3ezy_A 149 RIT 151 (344)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 28
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=99.64 E-value=1.1e-15 Score=141.45 Aligned_cols=119 Identities=16% Similarity=0.193 Sum_probs=102.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.+||+|+|++|+||+.+++.+.+. ++++++.+++...|. ...|+++|+|++++.++ .++|++|+|+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~---------~i~G~~vy~sl~el~~~----~~~Dv~Ii~v 72 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGM---------EVLGVPVYDTVKEAVAH----HEVDASIIFV 72 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---------EETTEEEESSHHHHHHH----SCCSEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCc---------eECCEEeeCCHHHHhhc----CCCCEEEEec
Confidence 489999999999999999998865 899888888754221 13589999999999752 3799999999
Q ss_pred CchhHHHHHHHHHHcCCC-EEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 115 DASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~-vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+|+.+.+.++.|+++|++ +|+.|+|++.++.++|.++++++++. +++|| ++|+
T Consensus 73 p~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~-vigPN-c~Gi 126 (288)
T 1oi7_A 73 PAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSR-LIGGN-CPGI 126 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCE-EEESS-SCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEeCC-CCeE
Confidence 999999999999999999 78889999998889999999998875 78899 7775
No 29
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=99.64 E-value=7.6e-16 Score=147.18 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=118.4
Q ss_pred CcceEEEEcCCc-hHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVK-EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~G-rMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
|++||+|+|+ | .||+.+++.+.+.++++|++++|++. ..+..++ ..+++++|+|++++++ +.++|+|+.
T Consensus 1 ~~~rigiiG~-G~~~~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~ell~----~~~vD~V~i 70 (387)
T 3moi_A 1 MKIRFGICGL-GFAGSVLMAPAMRHHPDAQIVAACDPNE--DVRERFG---KEYGIPVFATLAEMMQ----HVQMDAVYI 70 (387)
T ss_dssp CCEEEEEECC-SHHHHTTHHHHHHHCTTEEEEEEECSCH--HHHHHHH---HHHTCCEESSHHHHHH----HSCCSEEEE
T ss_pred CceEEEEEeC-CHHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHH---HHcCCCeECCHHHHHc----CCCCCEEEE
Confidence 5799999998 8 99999999999999999999999753 2223333 3568889999999997 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+++..|+++||||++++| ..+.++.++|.++|+++++.+.++.|+- ..+.-+.++.+. ...-++..+
T Consensus 71 ~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~~ 148 (387)
T 3moi_A 71 ASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQE--GSVGRVSML 148 (387)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHH--CTTCCEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhc--CCCCCeEEE
Confidence 99999999999999999999999999 8999999999999999999988888754 444444555432 223455555
Q ss_pred Ec
Q 022250 190 ES 191 (300)
Q Consensus 190 E~ 191 (300)
+.
T Consensus 149 ~~ 150 (387)
T 3moi_A 149 NC 150 (387)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 30
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=4.2e-15 Score=141.01 Aligned_cols=144 Identities=14% Similarity=0.136 Sum_probs=117.7
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+.. ...++++|+|++++++ +.++|+|+.+
T Consensus 7 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~-----~~~~~~~~~~~~~ll~----~~~~D~V~i~ 74 (364)
T 3e82_A 7 TINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASRDE--EKVKR-----DLPDVTVIASPEAAVQ----HPDVDLVVIA 74 (364)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHH-----HCTTSEEESCHHHHHT----CTTCSEEEEC
T ss_pred cceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHh-----hCCCCcEECCHHHHhc----CCCCCEEEEe
Confidence 699999998 999996 899998899999999999753 12221 1236788999999997 3689999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++.+.+..| |+..+..+.++.+. ...-++.-++
T Consensus 75 tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~~ 152 (364)
T 3e82_A 75 SPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQ--GTLGAVKHFE 152 (364)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH--TTTCSEEEEE
T ss_pred CChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHc--CCCcceEEEE
Confidence 9999999999999999999999999 89999999999999999999988887 56776666666543 2234555555
Q ss_pred cc
Q 022250 191 SR 192 (300)
Q Consensus 191 ~H 192 (300)
.+
T Consensus 153 ~~ 154 (364)
T 3e82_A 153 SH 154 (364)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 31
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.64 E-value=1e-14 Score=130.35 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=146.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||+|+|+ |+||+.+++.+. .++++|++++|++. .+ .. .++|++++++ .++|+|+++++
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~-~~g~~lv~v~d~~~---~~-------~~----~~~~~~~l~~-----~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLE-RNGFEIAAILDVRG---EH-------EK----MVRGIDEFLQ-----REMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCEEEEEECSSC---CC-------TT----EESSHHHHTT-----SCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHh-cCCCEEEEEEecCc---ch-------hh----hcCCHHHHhc-----CCCCEEEECCC
Confidence 58999998 999999999988 68999999999753 11 11 6789999884 47999999999
Q ss_pred chhHHHHHHHHHHcCCCEEEeCCCC-CHHHH-HHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccCCCCeEEEEccC
Q 022250 116 ASTVYDNVKQATAFGMRSVVYVPHI-QLETV-SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRP 193 (300)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigTTG~-~~e~~-~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~~dieIiE~Hh 193 (300)
++.+.+++..++++|+++|+++|+. +.++. ++|.++++++++.+++.+|++.|++.+.... + ....+.+.+.++
T Consensus 60 ~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~ 135 (236)
T 2dc1_A 60 QQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSAS--E--LIEEIVLTTRKN 135 (236)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTG--G--GEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhh--c--cccEEEEEEEcC
Confidence 9999999999999999999999965 33444 7899999999999999999999986654221 2 233455555566
Q ss_pred -CCCCCC----chHHHHHHHHHHhcCCccccCccccccccccccccCCCeeEEEEEcCCCCeeEEEEEccCCcEEEEEEE
Q 022250 194 -NARDFP----SPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHD 268 (300)
Q Consensus 194 -~K~DaP----SGTA~~l~~~i~~~~~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg~H~V~f~~~~E~iel~H~ 268 (300)
.+.+.| +|++...++.+ +...+-- ........ +...+.+.+- ... .-.|.+...|+...++++-+
T Consensus 136 ~~~~~~~~~~~~G~~~~~~~~~---~~~~n~~--~~~~~a~~---~~~~~~l~~~-~~~-~~~~~i~v~G~~g~~~~~~~ 205 (236)
T 2dc1_A 136 WRQFGRKGVIFEGSASEAAQKF---PKNLNVA--ATLSIASG---KDVKVRLVAD-EVE-ENIHEILVRGEFGEMEIRVR 205 (236)
T ss_dssp GGGTTSCEEEEEEEHHHHHHHS---TTCCHHH--HHHHHHHS---SCCEEEEEEE-SCS-SEEEEEEEEETTEEEEEEEE
T ss_pred hHHcCcceEEEeccHHHHHHHC---CchHHHH--HHHHHhcc---CceEEEEEEc-CCC-CcEEEEEEEecCeEEEEEEe
Confidence 677777 67764333221 1000000 00000000 1134455555 433 45899999999998888654
Q ss_pred eCC-----ccccHHHHHHHHHHhh
Q 022250 269 ITD-----VQSLMPGLILAIRKVV 287 (300)
Q Consensus 269 a~s-----R~~Fa~Gal~Aa~~l~ 287 (300)
-.. +++ ...++.+++-|.
T Consensus 206 ~~p~~~~~~t~-~~~~~s~~~~~~ 228 (236)
T 2dc1_A 206 NRPMRENPKTS-YLAALSVTRILR 228 (236)
T ss_dssp ECEETTEEEEE-HHHHHHHHHHHH
T ss_pred CCcCCCCCcch-HHHHHHHHHHHH
Confidence 332 233 445555555443
No 32
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=99.63 E-value=1.9e-15 Score=140.48 Aligned_cols=119 Identities=20% Similarity=0.310 Sum_probs=101.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC-ccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA-RAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~-~DVVIDf 113 (300)
+.||+|+|++|+||+.+++.+.+. ++++++.+++...|+. ..|+++|+|++++.++ .+ +|++|+|
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~~~DvaIi~ 78 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGSE---------VHGVPVYDSVKEALAE----HPEINTSIVF 78 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----CTTCCEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCce---------ECCEeeeCCHHHHhhc----CCCCCEEEEe
Confidence 588999999999999999998875 8898888886532221 2589999999999741 24 9999999
Q ss_pred CCchhHHHHHHHHHHcCCC-EEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 114 TDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~-vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
++|+.+.++++.|+++|++ +|+.|+|+++++.++|.++|+++++. ++.|| ++|+
T Consensus 79 vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~-viGPN-c~Gi 133 (297)
T 2yv2_A 79 VPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGAT-IIGPN-CPGA 133 (297)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EECSS-SCEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEcCC-CCee
Confidence 9999999999999999999 78889999998889999999998875 78899 7775
No 33
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=99.63 E-value=7.5e-16 Score=148.03 Aligned_cols=135 Identities=14% Similarity=0.118 Sum_probs=111.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc--------CCcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--------~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~ 104 (300)
.+|||||+|+ |.||+.+++.+.+. ++++|++++|++. ..+..++ .++++ ++|+|++++++ +
T Consensus 25 ~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~--~~a~~~a---~~~~~~~~y~d~~~ll~----~ 94 (412)
T 4gqa_A 25 ARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQ--AMAERHA---AKLGAEKAYGDWRELVN----D 94 (412)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSH--HHHHHHH---HHHTCSEEESSHHHHHH----C
T ss_pred ccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEcCCH--HHHHHHH---HHcCCCeEECCHHHHhc----C
Confidence 3699999998 99999999988764 4689999999753 2233333 34566 48999999997 3
Q ss_pred CCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHH
Q 022250 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAIS 178 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~ 178 (300)
.++|+|+.+|++..+.+++..|+++||||+|++| +.+.++.++|.++|+++++.+.+.-|+ ...+..++++.+.
T Consensus 95 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~ 171 (412)
T 4gqa_A 95 PQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIAR 171 (412)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhc
Confidence 6899999999999999999999999999999999 899999999999999999998887774 4455455555543
No 34
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=99.63 E-value=5.5e-15 Score=137.58 Aligned_cols=133 Identities=12% Similarity=0.075 Sum_probs=111.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+.+++.+.+.+++++++++|++. ..+..++ ..+++ ++|+|++++++ .++|+|+.+
T Consensus 1 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d~~~--~~~~~~~---~~~~~~~~~~~~~~~l~-----~~~D~V~i~ 69 (325)
T 2ho3_A 1 MLKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYSRKL--ETAATFA---SRYQNIQLFDQLEVFFK-----SSFDLVYIA 69 (325)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSEEEEEEECSSH--HHHHHHG---GGSSSCEEESCHHHHHT-----SSCSEEEEC
T ss_pred CeEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHH---HHcCCCeEeCCHHHHhC-----CCCCEEEEe
Confidence 589999998 999999999999889999999999753 2222333 34554 67899999983 589999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHH
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAIS 178 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~ 178 (300)
|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.++.+.| |+.+...+.++.+.
T Consensus 70 tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~ 137 (325)
T 2ho3_A 70 SPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLAD 137 (325)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhhh
Confidence 9999999999999999999999998 78999999999999999998887665 67777777776653
No 35
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=99.63 E-value=4.5e-15 Score=138.89 Aligned_cols=147 Identities=8% Similarity=0.074 Sum_probs=115.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCCccEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
.|+||+|+|+ |+||+.+++.+. +.+++++++++|++. ..+..++ ..+|+ ++|+|++++++ +.++|+|+
T Consensus 7 ~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~l~----~~~~D~V~ 76 (346)
T 3cea_A 7 KPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDS--NQLEWAK---NELGVETTYTNYKDMID----TENIDAIF 76 (346)
T ss_dssp CCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCH--HHHHHHH---HTTCCSEEESCHHHHHT----TSCCSEEE
T ss_pred CcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCH--HHHHHHH---HHhCCCcccCCHHHHhc----CCCCCEEE
Confidence 3699999998 999999999988 778999999999753 2222333 34566 67899999986 24799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhC-CCeEEEcCC--CcHHHHHHHHHHHHhccCCCCeE
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKA-SMGCLIAPT--LSIGSILLQQAAISASFHYKNVE 187 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~-~i~iv~a~N--~SiGv~ll~~~a~~~~~~~~die 187 (300)
++|++..+.+.+..|+++|++|++++| +.+.++.++|.++++++ ++.++.+.| |+.+...+.++.+. ...-++.
T Consensus 77 i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~--g~iG~i~ 154 (346)
T 3cea_A 77 IVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDN--GDIGKII 154 (346)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHT--TTTCSEE
T ss_pred EeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHc--CCCCCeE
Confidence 999999999999999999999999998 78899999999999998 988887776 45566556555532 1234555
Q ss_pred EEEcc
Q 022250 188 IVESR 192 (300)
Q Consensus 188 IiE~H 192 (300)
.++.+
T Consensus 155 ~v~~~ 159 (346)
T 3cea_A 155 YMRGY 159 (346)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55553
No 36
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=99.62 E-value=2.1e-15 Score=142.56 Aligned_cols=123 Identities=11% Similarity=0.151 Sum_probs=103.3
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC----cceecCHHHHHhcccccCCcc
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE----IPVMSDLTMVLGSISQSKARA 108 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g----v~v~~dl~~~l~~~~~~~~~D 108 (300)
..|+||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ ..++ +++|+|++++++ +.++|
T Consensus 4 ~~~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~~~--~~~~~~a---~~~~~~~~~~~~~~~~~ll~----~~~~D 73 (362)
T 1ydw_A 4 ETQIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSL--EKAKAFA---TANNYPESTKIHGSYESLLE----DPEID 73 (362)
T ss_dssp --CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHH---HHTTCCTTCEEESSHHHHHH----CTTCC
T ss_pred CCceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHH---HHhCCCCCCeeeCCHHHHhc----CCCCC
Confidence 34699999998 999999999999889999999999753 2222222 2233 567899999996 25799
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
+|+.+|++..+.+++..|+++|+||++++| +.+.++.++|.++|+++++.++.+.|+
T Consensus 74 ~V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~ 131 (362)
T 1ydw_A 74 ALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMW 131 (362)
T ss_dssp EEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCG
T ss_pred EEEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 999999999999999999999999999998 789999999999999999998877654
No 37
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.62 E-value=4.8e-15 Score=137.08 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=101.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|++|+||+.+++.+.+. ++++++.+++...|. ..+|+++|+|++++.++ .++|++|+|+
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~---------~~~G~~vy~sl~el~~~----~~~D~viI~t 72 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGT---------THLGLPVFNTVREAVAA----TGATASVIYV 72 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---------EETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccc---------eeCCeeccCCHHHHhhc----CCCCEEEEec
Confidence 589999999999999999998875 789998888753221 13688999999999851 3799999999
Q ss_pred CchhHHHHHHHHHHcCCCE-EEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 115 DASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~v-VigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+|+.+.+.++.|+++|+++ |+.|+|++.++.++|.++|+++++. ++.|| ++|+
T Consensus 73 P~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~-liGPN-c~Gi 126 (288)
T 2nu8_A 73 PAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR-MIGPN-TPGV 126 (288)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EECSS-CCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEecC-Ccce
Confidence 9999999999999999997 5667799998889999999999886 68999 5553
No 38
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=2.2e-15 Score=139.83 Aligned_cols=119 Identities=19% Similarity=0.333 Sum_probs=101.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..||+|+|++|+||+.+++.+.+ .++++++.+++...|+. -.|+++|+|++++.++ .++|++|+|+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~-~g~~~V~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~~Dv~ii~v 78 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLE-CGTKIVGGVTPGKGGQN---------VHGVPVFDTVKEAVKE----TDANASVIFV 78 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHH-TTCCEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHHHHh-CCCeEEEEeCCCCCCce---------ECCEeeeCCHHHHhhc----CCCCEEEEcc
Confidence 57899999999999999999886 48888888886532221 2578999999999742 3799999999
Q ss_pred CchhHHHHHHHHHHcCCC-EEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 115 DASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~-vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+|+.+.+.++.|+++|++ +|+.|+|+++++.++|.++|+++++. ++.|| ++|+
T Consensus 79 p~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~-viGPN-c~Gi 132 (294)
T 2yv1_A 79 PAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVK-IIGPN-TPGI 132 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCE-EECSS-CCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEcCC-Ccee
Confidence 999999999999999999 77789999998889999999998875 78899 7775
No 39
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=99.61 E-value=2.6e-15 Score=141.07 Aligned_cols=145 Identities=12% Similarity=0.054 Sum_probs=114.6
Q ss_pred cceEEEEcCCc-hHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVK-EIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~G-rMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
++||+|+|+ | .||+.+++.+.+. ++++|++++|++. ..+..++ ..+++ ++|+|++++++ +.++|+|+
T Consensus 18 ~irvgiIG~-G~~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~----~~~vD~V~ 87 (340)
T 1zh8_A 18 KIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTR--SHAEEFA---KMVGNPAVFDSYEELLE----SGLVDAVD 87 (340)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSH--HHHHHHH---HHHSSCEEESCHHHHHH----SSCCSEEE
T ss_pred ceeEEEEec-CHHHHHHHHHHHHhCCCceEEEEEEcCCH--HHHHHHH---HHhCCCcccCCHHHHhc----CCCCCEEE
Confidence 699999998 9 8999999999888 8999999999753 2223333 24555 78999999997 35799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeEE
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEI 188 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~dieI 188 (300)
.+|++..+.+.+..|+++|+||++++| +.+.++.++|.++|+++++.+.++.|+ +..+..+.++.+. ...-++.-
T Consensus 88 i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~ 165 (340)
T 1zh8_A 88 LTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVES--GAIGDPVF 165 (340)
T ss_dssp ECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHT--TTTSSEEE
T ss_pred EeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--CCCCCcEE
Confidence 999999999999999999999999999 789999999999999999988877665 4444444554432 22335554
Q ss_pred EEc
Q 022250 189 VES 191 (300)
Q Consensus 189 iE~ 191 (300)
++.
T Consensus 166 v~~ 168 (340)
T 1zh8_A 166 MNW 168 (340)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 40
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=99.61 E-value=3.4e-15 Score=138.63 Aligned_cols=119 Identities=14% Similarity=0.233 Sum_probs=100.4
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+..++ ..+|+++++|++++ + .++|+|+.+
T Consensus 5 ~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~--~~~~~~~---~~~g~~~~~~~~~l-~-----~~~D~V~i~ 72 (319)
T 1tlt_A 5 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTR--AKALPIC---ESWRIPYADSLSSL-A-----ASCDAVFVH 72 (319)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSC--TTHHHHH---HHHTCCBCSSHHHH-H-----TTCSEEEEC
T ss_pred cceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCccCcHHHh-h-----cCCCEEEEe
Confidence 589999998 999996 999888889999999999764 2222232 23466788899877 4 589999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
|++..+.+.+..|+++|++|++++| +.+.++.++|.++|+++++.++.+-|+
T Consensus 73 tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 125 (319)
T 1tlt_A 73 SSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNR 125 (319)
T ss_dssp SCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeec
Confidence 9999999999999999999999998 789999999999999999888776554
No 41
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=99.61 E-value=5.8e-15 Score=139.64 Aligned_cols=131 Identities=16% Similarity=0.130 Sum_probs=111.0
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+.. .-.++++|+|++++++ +.++|+|+.+
T Consensus 5 ~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~-----~~~~~~~~~~~~~ll~----~~~vD~V~i~ 72 (358)
T 3gdo_A 5 TIKVGILGY-GLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKR-----DFPDAEVVHELEEITN----DPAIELVIVT 72 (358)
T ss_dssp CEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHH-----HCTTSEEESSTHHHHT----CTTCCEEEEC
T ss_pred cceEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHh-----hCCCCceECCHHHHhc----CCCCCEEEEc
Confidence 599999998 999996 899888889999999999753 11211 1126788999999997 3679999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHH
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAI 177 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~ 177 (300)
|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++.+.+..| |...+..+.++.+
T Consensus 73 tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 139 (358)
T 3gdo_A 73 TPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLIS 139 (358)
T ss_dssp SCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHh
Confidence 9999999999999999999999999 89999999999999999999998887 5666666666654
No 42
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=99.61 E-value=4e-15 Score=140.92 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=113.3
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCC-CcceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
++||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+..++ ..+ ++++|+|++++++. .++|+|+.
T Consensus 5 ~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~~----~~vD~V~i 74 (359)
T 3m2t_A 5 LIKVGLVGI-GAQMQENLLPSLLQMQDIRIVAACDSDL--ERARRVH---RFISDIPVLDNVPAMLNQ----VPLDAVVM 74 (359)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTCTTEEEEEEECSSH--HHHGGGG---GTSCSCCEESSHHHHHHH----SCCSEEEE
T ss_pred cceEEEECC-CHHHHHHHHHHHHhCCCcEEEEEEcCCH--HHHHHHH---HhcCCCcccCCHHHHhcC----CCCCEEEE
Confidence 589999998 999995 899999889999999999753 2223333 234 56789999999973 57899999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHHHHhccCCCCeEEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIV 189 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a~~~~~~~~dieIi 189 (300)
+|++..+.+.+..|+++||||+|++| +.+.++.++|.++++++++.+.++.|+- ..+..+.++.+. +..-++..+
T Consensus 75 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~~ 152 (359)
T 3m2t_A 75 AGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQV--DEFGETLHI 152 (359)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHHTS--GGGCCEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHHHC--CCCCCeEEE
Confidence 99999999999999999999999999 8999999999999999999888877643 333333333321 123355555
Q ss_pred Ec
Q 022250 190 ES 191 (300)
Q Consensus 190 E~ 191 (300)
+.
T Consensus 153 ~~ 154 (359)
T 3m2t_A 153 QL 154 (359)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 43
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=99.61 E-value=2.5e-15 Score=138.88 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=103.7
Q ss_pred CcceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
+|+||+|+|+ |+||+. +++.+.+.++++|++++|++. ..+..++ ..+|++.|+|++++++ ++|+|+.
T Consensus 5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~~~~~~~~~~~ll~------~~D~V~i 72 (308)
T 3uuw_A 5 KNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNK--VKREKIC---SDYRIMPFDSIESLAK------KCDCIFL 72 (308)
T ss_dssp CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCH--HHHHHHH---HHHTCCBCSCHHHHHT------TCSEEEE
T ss_pred ccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCCcCCHHHHHh------cCCEEEE
Confidence 3689999998 999996 999888889999999999753 2233333 3456777999999994 7999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
+|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++|+.+.++-|+-
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r 127 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRR 127 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 99999999999999999999999999 7899999999999999999888876643
No 44
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=99.60 E-value=1e-14 Score=134.75 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=103.3
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHh---cCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccE
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~---~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (300)
+.|+||+|+|+ |.||+.+++.+.. .++++|++++|++... ..++++ +.|++++++ +.++|+
T Consensus 5 ~~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----------~~~g~~-~~~~~ell~----~~~vD~ 68 (294)
T 1lc0_A 5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----------SLDEVR-QISLEDALR----SQEIDV 68 (294)
T ss_dssp CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----------EETTEE-BCCHHHHHH----CSSEEE
T ss_pred CCcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchHHH----------HHcCCC-CCCHHHHhc----CCCCCE
Confidence 34799999998 9999999998876 6889999999875311 234565 589999997 367999
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCcHH
Q 022250 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIG 168 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~SiG 168 (300)
|+.+|++..+.+++..|+++||||+|++| ..+.++.++|.++++++|+.++.+.|+-..
T Consensus 69 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~ 128 (294)
T 1lc0_A 69 AYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLM 128 (294)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGS
T ss_pred EEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcc
Confidence 99999999999999999999999999999 789999999999999999998888887654
No 45
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=99.60 E-value=5.7e-15 Score=140.06 Aligned_cols=144 Identities=10% Similarity=0.049 Sum_probs=112.6
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC-cceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-IPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g-v~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
++||+|+|+ |++|.. ++..+. .++++|++++|++. ..+..++ ..++ .++|+|++++++ +.++|+|+.
T Consensus 26 ~irvgiiG~-G~~~~~~~~~~~~-~~~~~lvav~d~~~--~~a~~~a---~~~~~~~~~~~~~~ll~----~~~vD~V~I 94 (361)
T 3u3x_A 26 ELRFAAVGL-NHNHIYGQVNCLL-RAGARLAGFHEKDD--ALAAEFS---AVYADARRIATAEEILE----DENIGLIVS 94 (361)
T ss_dssp CCEEEEECC-CSTTHHHHHHHHH-HTTCEEEEEECSCH--HHHHHHH---HHSSSCCEESCHHHHHT----CTTCCEEEE
T ss_pred CcEEEEECc-CHHHHHHHHHHhh-cCCcEEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhc----CCCCCEEEE
Confidence 589999998 999964 666655 68999999999753 2233333 3455 578999999997 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC---cHHHHHHHHHHHHhccCCCCeEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL---SIGSILLQQAAISASFHYKNVEI 188 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~---SiGv~ll~~~a~~~~~~~~dieI 188 (300)
+|++..+.+.+..|+++||||+|++| ..+.++.++|.++|+++++.+.+..|+ +..+..+.++.+. +..-++..
T Consensus 95 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i~~--g~iG~i~~ 172 (361)
T 3u3x_A 95 AAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVAA--GAIGEVVH 172 (361)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHHHT--TTTSSEEE
T ss_pred eCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHHHc--CCCCCeEE
Confidence 99999999999999999999999999 899999999999999999999988886 3555555555532 12334444
Q ss_pred EEc
Q 022250 189 VES 191 (300)
Q Consensus 189 iE~ 191 (300)
++.
T Consensus 173 ~~~ 175 (361)
T 3u3x_A 173 IVG 175 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 46
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=99.59 E-value=6.4e-15 Score=143.17 Aligned_cols=147 Identities=9% Similarity=0.025 Sum_probs=114.6
Q ss_pred CcceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc-----ceecCHHHHHhcccccCCc
Q 022250 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-----PVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv-----~v~~dl~~~l~~~~~~~~~ 107 (300)
.++||+|+|+ |+||+ .+++.+.+.++++|++++|++. ..+..+. ..+++ .+|+|++++++ +.++
T Consensus 82 ~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~~~~ll~----~~~v 151 (433)
T 1h6d_A 82 RRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNA--EKAKIVA---AEYGVDPRKIYDYSNFDKIAK----DPKI 151 (433)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCH--HHHHHHH---HHTTCCGGGEECSSSGGGGGG----CTTC
T ss_pred CceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHH---HHhCCCcccccccCCHHHHhc----CCCC
Confidence 3699999998 99997 8999998888999999999753 1222222 23344 36899999986 3579
Q ss_pred cEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCC
Q 022250 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYK 184 (300)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~ 184 (300)
|+|+++|++..+.+++..|+++|+||++++| +.+.++.++|.++++++++.++++.|+ +.....+.++.+. ...-
T Consensus 152 D~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG 229 (433)
T 1h6d_A 152 DAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRE--NQLG 229 (433)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHT--TSSC
T ss_pred CEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHHc--CCCC
Confidence 9999999999999999999999999999998 789999999999999999988887764 5555555555432 2234
Q ss_pred CeEEEEcc
Q 022250 185 NVEIVESR 192 (300)
Q Consensus 185 dieIiE~H 192 (300)
++..++.+
T Consensus 230 ~i~~v~~~ 237 (433)
T 1h6d_A 230 KLGMVTTD 237 (433)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 56655653
No 47
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=99.59 E-value=4.6e-15 Score=146.15 Aligned_cols=160 Identities=14% Similarity=0.132 Sum_probs=121.3
Q ss_pred eccccCccccccccee--------eEeecCCCCCcceEEEEcCC---chHHHHHHHHHHhc-CCcEEEEEEecCCCCcch
Q 022250 9 HCRMHHISQNVKAKRF--------ISCSTNPPQSNIKVIINGAV---KEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDI 76 (300)
Q Consensus 9 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ikV~V~Ga~---GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~ 76 (300)
|.--||.+.|++.-+- .+.|+-|++.++||+|+|++ |.||+.+++.+.+. ++++|++++|++. ..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~--~~a 82 (479)
T 2nvw_A 5 HHHHHHSSENLYFQGHMLANNNKRSKLSTVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTL--KSS 82 (479)
T ss_dssp ---CTTCGGGTGGGTCCCCCCCTTSGGGSSGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCH--HHH
T ss_pred cccccccchhHHHHHHHHhhccccccCCCCCCCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCH--HHH
Confidence 3445666666654332 22344444446999999983 99999999999987 8999999999753 222
Q ss_pred hhhhcCcCCCCcc---eecCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcC------CCEEEeCC-CCCHHHHH
Q 022250 77 GMVCDMEQPLEIP---VMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETVS 146 (300)
Q Consensus 77 ~~~~g~~~~~gv~---v~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G------~~vVigTT-G~~~e~~~ 146 (300)
..++ ..+|++ +|+|++++++ +.++|+|+.+|++..+.+.+..|+++| +||+|++| ..+.++.+
T Consensus 83 ~~~a---~~~g~~~~~~~~d~~ell~----~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~ 155 (479)
T 2nvw_A 83 LQTI---EQLQLKHATGFDSLESFAQ----YKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAE 155 (479)
T ss_dssp HHHH---HHTTCTTCEEESCHHHHHH----CTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHH
T ss_pred HHHH---HHcCCCcceeeCCHHHHhc----CCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHH
Confidence 2233 245554 8999999997 357999999999999999999999999 99999998 78999999
Q ss_pred HHHHHhhhCC-CeEEEcCCC--cHHHHHHHHHHH
Q 022250 147 ALSAFCDKAS-MGCLIAPTL--SIGSILLQQAAI 177 (300)
Q Consensus 147 ~L~~~a~~~~-i~iv~a~N~--SiGv~ll~~~a~ 177 (300)
+|.++|++++ +.+.++.|+ +..+..+.++.+
T Consensus 156 ~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~ 189 (479)
T 2nvw_A 156 ELYSISQQRANLQTIICLQGRKSPYIVRAKELIS 189 (479)
T ss_dssp HHHHHHHTCTTCEEEEECGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEeccccCHHHHHHHHHHH
Confidence 9999999999 888877664 455555555553
No 48
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=99.58 E-value=2.3e-14 Score=133.46 Aligned_cols=126 Identities=12% Similarity=0.137 Sum_probs=103.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcc---c-ccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSI---S-QSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~---~-~~~~~DVV 110 (300)
|+||+|+|+.|.||+.+++.+.+. +.+|++++|++..- ..+.. ...++++|+|++++++.+ . ++.++|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~~~~--~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNV---GLVDS--FFPEAEFFTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GGGGG--TCTTCEEESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HHHHh--hCCCCceeCCHHHHHHHhhhhcccCCCCcEE
Confidence 699999998678999999999875 79999999976421 12211 123678899999998100 0 03689999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
+.+|++..+.++++.|+++||||+|++| ..+.++.++|.++|+++++.+..+.|+-
T Consensus 77 ~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R 133 (312)
T 3o9z_A 77 SIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLR 133 (312)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGG
T ss_pred EECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehh
Confidence 9999999999999999999999999999 8999999999999999999888777754
No 49
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=99.58 E-value=3.9e-15 Score=140.35 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=112.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-------EEEEEEecCCCCcchhhhhcCcCCCCc-ceecCHHHHHhcccccCC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-------EVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-------eLvg~vd~~~~g~d~~~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~ 106 (300)
++||||+|+ |.||+.+++.+.+.|++ +|++++|++. ..+..++ .++|+ ++|+|++++++ +.+
T Consensus 6 klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~--~~a~~~a---~~~g~~~~~~d~~~ll~----~~~ 75 (390)
T 4h3v_A 6 NLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDA--EAVRAAA---GKLGWSTTETDWRTLLE----RDD 75 (390)
T ss_dssp EEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSH--HHHHHHH---HHHTCSEEESCHHHHTT----CTT
T ss_pred cCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhc----CCC
Confidence 589999998 99999999998876654 9999999763 2233333 34565 47899999997 368
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHH---hhhCCCeEEEcCCC--cHHHHHHHHHHHHhc
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAF---CDKASMGCLIAPTL--SIGSILLQQAAISAS 180 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~---a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~ 180 (300)
+|+|+.+|++..|.+.+..|+++||||+|++| +.+.++.++|.++ ++++++.+.+.-|+ +..+..+.++.+.
T Consensus 76 iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~-- 153 (390)
T 4h3v_A 76 VQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVAD-- 153 (390)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHT--
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHc--
Confidence 99999999999999999999999999999999 8999999998655 66688888887775 4444444555432
Q ss_pred cCCCCeEEEEc
Q 022250 181 FHYKNVEIVES 191 (300)
Q Consensus 181 ~~~~dieIiE~ 191 (300)
...-++.-++.
T Consensus 154 g~iG~i~~v~~ 164 (390)
T 4h3v_A 154 GKIGTVRHVRA 164 (390)
T ss_dssp TSSCSEEEEEE
T ss_pred CCCCcceeeEE
Confidence 22345555554
No 50
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=99.58 E-value=7.2e-15 Score=140.90 Aligned_cols=149 Identities=15% Similarity=0.106 Sum_probs=114.6
Q ss_pred cceEEEEcCCch---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhhcCcCCCCc---ceecCHHHHHhccc-ccCC
Q 022250 35 NIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~Gr---MG~~i~~~i~~~~~~eLvg-~vd~~~~g~d~~~~~g~~~~~gv---~v~~dl~~~l~~~~-~~~~ 106 (300)
++||+|+|+ |+ ||+.++..+...++++|++ ++|++. ..+..++ .++|+ ++|+|++++++..+ .+.+
T Consensus 12 ~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a---~~~g~~~~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 12 PIRWAMVGG-GSQSQIGYIHRCAALRDNTFVLVAGAFDIDP--IRGSAFG---EQLGVDSERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp CEEEEEEEC-CTTCSSHHHHHHHHHGGGSEEEEEEECCSSH--HHHHHHH---HHTTCCGGGBCSSHHHHHHHHTTCTTC
T ss_pred cceEEEEcC-CccchhHHHHHHHHhhCCCeEEEEEEeCCCH--HHHHHHH---HHhCCCcceeeCCHHHHHhcccccCCC
Confidence 699999998 99 9999999998888999998 678653 2223333 35677 68999999996200 0035
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHHHHhccCC
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHY 183 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a~~~~~~~ 183 (300)
+|+|+.+|++..+.+++..|+++||||+|++| +.+.++.++|.++++++++.+.++.|+- ..+..+.++.+. ...
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--G~i 163 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAA--GEL 163 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHT--TTT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--CCC
Confidence 99999999999999999999999999999999 8999999999999999999988887764 344444444432 223
Q ss_pred CCeEEEEc
Q 022250 184 KNVEIVES 191 (300)
Q Consensus 184 ~dieIiE~ 191 (300)
-++..++.
T Consensus 164 G~i~~v~~ 171 (398)
T 3dty_A 164 GDVRMVHM 171 (398)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 45555554
No 51
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=99.58 E-value=2e-14 Score=139.93 Aligned_cols=153 Identities=10% Similarity=0.043 Sum_probs=114.9
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC---cceec----CHHHHHhcccc
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE---IPVMS----DLTMVLGSISQ 103 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g---v~v~~----dl~~~l~~~~~ 103 (300)
++++++||+|+|+ |.||+.+++.+.+.++++|++++|++. ..+..++..-.++| +++|+ |++++++
T Consensus 16 ~~~~~~rvgiIG~-G~~g~~h~~~l~~~~~~~lvav~d~~~--~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~---- 88 (444)
T 2ixa_A 16 FNPKKVRIAFIAV-GLRGQTHVENMARRDDVEIVAFADPDP--YMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLK---- 88 (444)
T ss_dssp ---CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSCH--HHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTT----
T ss_pred CCCCCceEEEEec-CHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHHHHHhcCCCCCceeccCCCCHHHHhc----
Confidence 3344799999998 999999999999889999999999753 22222210000123 56788 9999996
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHHhc
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISAS 180 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~~~ 180 (300)
+.++|+|+.+|++..+.+.+..|+++||||+|++| ..+.++.++|.++|+++++.+.+..| |..+...+.++++.
T Consensus 89 ~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~-- 166 (444)
T 2ixa_A 89 DKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRK-- 166 (444)
T ss_dssp CTTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHT--
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHHc--
Confidence 35799999999999999999999999999999999 78999999999999999988887665 45554444444432
Q ss_pred cCCCCeEEEEcc
Q 022250 181 FHYKNVEIVESR 192 (300)
Q Consensus 181 ~~~~dieIiE~H 192 (300)
...-++.-++.+
T Consensus 167 G~iG~i~~v~~~ 178 (444)
T 2ixa_A 167 GMFGELVHGTGG 178 (444)
T ss_dssp TTTCSEEEEEEC
T ss_pred CCCCCeEEEEEE
Confidence 123466666653
No 52
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=99.57 E-value=2.4e-14 Score=133.19 Aligned_cols=143 Identities=15% Similarity=0.083 Sum_probs=111.7
Q ss_pred ceEEEEcCCchHHHHH-HHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccccCCccEEEEc
Q 022250 36 IKVIINGAVKEIGRAA-VIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i-~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|||+|+|+ |+||+.+ ++.+.+ +++++++++|++. ..+..++ ..++++ +|+|++++++ +.++|+|+.+
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~-~~~~~vav~d~~~--~~~~~~~---~~~g~~~~~~~~~~~l~----~~~~D~V~i~ 69 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRA-TGGEVVSMMSTSA--ERGAAYA---TENGIGKSVTSVEELVG----DPDVDAVYVS 69 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHH-TTCEEEEEECSCH--HHHHHHH---HHTTCSCCBSCHHHHHT----CTTCCEEEEC
T ss_pred CeEEEEcc-cHHHHHhhhHHhhc-CCCeEEEEECCCH--HHHHHHH---HHcCCCcccCCHHHHhc----CCCCCEEEEe
Confidence 58999998 9999998 888887 8999999999753 2222233 245664 7899999986 2479999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHHHhccCCCCeEEEE
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIVE 190 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~~~~~~~~dieIiE 190 (300)
|++..+.+.+..|+++|+||++++| +.+.++.++|.++++++++.++.+.|+ ..++..+.++.+. ...-++.-++
T Consensus 70 tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~--g~iG~i~~v~ 147 (332)
T 2glx_A 70 TTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAE--GRIGRPIAAR 147 (332)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHT--TTTSSEEEEE
T ss_pred CChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHc--CCCCCeEEEE
Confidence 9999999999999999999999998 789999999999999999998888774 4555555555532 1233444444
Q ss_pred c
Q 022250 191 S 191 (300)
Q Consensus 191 ~ 191 (300)
.
T Consensus 148 ~ 148 (332)
T 2glx_A 148 V 148 (332)
T ss_dssp E
T ss_pred E
Confidence 4
No 53
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=99.57 E-value=5.3e-15 Score=138.59 Aligned_cols=146 Identities=10% Similarity=0.029 Sum_probs=111.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC--CCcchhhhhcCcCCCC--cceecCHHHHHhcccccCCccE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--~g~d~~~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DV 109 (300)
||+||+|+|+ |.+|+.+++.+ .++++|++++|++. ..+.+.+.+ .+++ .++|+|++++++. .++|+
T Consensus 1 M~~rvgiiG~-G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll~~----~~vD~ 70 (337)
T 3ip3_A 1 MSLKICVIGS-SGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAI---SEMNIKPKKYNNWWEMLEK----EKPDI 70 (337)
T ss_dssp -CEEEEEECS-SSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHH---HTTTCCCEECSSHHHHHHH----HCCSE
T ss_pred CceEEEEEcc-chhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHH---HHcCCCCcccCCHHHHhcC----CCCCE
Confidence 6899999998 88888988877 79999999999753 222333322 2334 4789999999973 57999
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCe--EEEcCC--CcHHHHHHHHHHHHhccCCC
Q 022250 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMG--CLIAPT--LSIGSILLQQAAISASFHYK 184 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~--iv~a~N--~SiGv~ll~~~a~~~~~~~~ 184 (300)
|+.+|++..+.+.+..|+++||||+|++| +.+.++.++|.++|+++++. +.+.-| |+.....+.++.+. ...-
T Consensus 71 V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG 148 (337)
T 3ip3_A 71 LVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSE--GAVG 148 (337)
T ss_dssp EEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHH--TTTS
T ss_pred EEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhc--CCcc
Confidence 99999999999999999999999999999 89999999999999999988 555544 44555555555542 1234
Q ss_pred CeEEEEc
Q 022250 185 NVEIVES 191 (300)
Q Consensus 185 dieIiE~ 191 (300)
++..++.
T Consensus 149 ~i~~i~~ 155 (337)
T 3ip3_A 149 EIRLVNT 155 (337)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 5555554
No 54
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=99.56 E-value=3.8e-14 Score=132.32 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=108.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhc---cc--ccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGS---IS--QSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~---~~--~~~~~DV 109 (300)
|+||+|+|+.|.||+.+++.+.+. +.+|++++|++..- ..+.. ...++++|+|++++++. ++ ++.++|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~~~~--~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~ 76 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSV---GIIDS--ISPQSEFFTEFEFFLDHASNLKRDSATALDY 76 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GGGGG--TCTTCEEESSHHHHHHHHHHHTTSTTTSCCE
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HHHHh--hCCCCcEECCHHHHHHhhhhhhhccCCCCcE
Confidence 799999998678999999999875 89999999976421 12221 12367889999999820 00 0268999
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHHHHHHHHHHH
Q 022250 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAI 177 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiGv~ll~~~a~ 177 (300)
|+.+|++..+.+++..|+++||||+|++| +.+.++.++|.++++++++.+..+.|+ .....-+.++.+
T Consensus 77 V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 147 (318)
T 3oa2_A 77 VSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVA 147 (318)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHHh
Confidence 99999999999999999999999999999 899999999999999999988877764 344444455543
No 55
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.56 E-value=9.9e-15 Score=135.63 Aligned_cols=129 Identities=18% Similarity=0.180 Sum_probs=104.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+. ..|++ +.+++++++ ..++|+|+++|
T Consensus 9 ~irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~--~~~~-------~~g~~-~~~~~~l~~----~~~~DvViiat 73 (304)
T 3bio_A 9 KIRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNP--AEVP-------FELQP-FRVVSDIEQ----LESVDVALVCS 73 (304)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC----------------CCTT-SCEESSGGG----SSSCCEEEECS
T ss_pred CCEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCH--HHHH-------HcCCC-cCCHHHHHh----CCCCCEEEECC
Confidence 599999998 999999999999889999999999753 1111 13444 233333333 14799999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHH
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAIS 178 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~ 178 (300)
++..+.+++..|+++|++|+++|| +.+.++.++|.++++++++.++++.+|+.|+..+.++.+.
T Consensus 74 p~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~ 139 (304)
T 3bio_A 74 PSREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQ 139 (304)
T ss_dssp CHHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHC
Confidence 999999999999999999999987 6788899999999999999889999999999877776544
No 56
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=99.56 E-value=4.7e-15 Score=141.84 Aligned_cols=118 Identities=17% Similarity=0.278 Sum_probs=101.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
++||+|+|+ | +|+.+++++.+.+ ++||+|++|++. +.+..++ .++|++.|+|++++++ ++|+|+..
T Consensus 7 ~~rv~VvG~-G-~g~~h~~a~~~~~~~~elvav~~~~~--~~a~~~a---~~~gv~~~~~~~~l~~------~~D~v~i~ 73 (372)
T 4gmf_A 7 KQRVLIVGA-K-FGEMYLNAFMQPPEGLELVGLLAQGS--ARSRELA---HAFGIPLYTSPEQITG------MPDIACIV 73 (372)
T ss_dssp CEEEEEECS-T-TTHHHHHTTSSCCTTEEEEEEECCSS--HHHHHHH---HHTTCCEESSGGGCCS------CCSEEEEC
T ss_pred CCEEEEEeh-H-HHHHHHHHHHhCCCCeEEEEEECCCH--HHHHHHH---HHhCCCEECCHHHHhc------CCCEEEEE
Confidence 799999997 8 8999999988776 699999999764 3444555 5689999999999984 69999888
Q ss_pred CCchhH----HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 114 TDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 114 T~p~~~----~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
|++..+ .+.++.|+++||||+|++| ++.++.++|.++|+++|+.+.+..|+-
T Consensus 74 ~p~~~h~~~~~~~a~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~~yr 129 (372)
T 4gmf_A 74 VRSTVAGGAGTQLARHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCYWINTFYP 129 (372)
T ss_dssp CC--CTTSHHHHHHHHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCEEEECSGG
T ss_pred CCCcccchhHHHHHHHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEEEEcCccc
Confidence 877666 8999999999999999999 788999999999999999999987764
No 57
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=99.56 E-value=1e-14 Score=140.98 Aligned_cols=149 Identities=17% Similarity=0.139 Sum_probs=113.1
Q ss_pred cceEEEEcCCch---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhhcCcCCCCc---ceecCHHHHHhccc-ccCC
Q 022250 35 NIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~Gr---MG~~i~~~i~~~~~~eLvg-~vd~~~~g~d~~~~~g~~~~~gv---~v~~dl~~~l~~~~-~~~~ 106 (300)
++||+|+|+ |+ ||+.++..+...++++|++ ++|++. ..+..++ ..+|+ ++|+|++++++... ...+
T Consensus 37 ~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a---~~~g~~~~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 37 RIRLGMVGG-GSGAFIGAVHRIAARLDDHYELVAGALSSTP--EKAEASG---RELGLDPSRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp CEEEEEESC-C--CHHHHHHHHHHHHTSCEEEEEEECCSSH--HHHHHHH---HHHTCCGGGBCSCHHHHHHHHHHCTTC
T ss_pred cceEEEEcC-CCchHHHHHHHHHHhhCCCcEEEEEEeCCCH--HHHHHHH---HHcCCCcccccCCHHHHHhcccccCCC
Confidence 589999998 99 9999999998888999997 778653 2223333 34566 58999999997100 0035
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHHHHHhccCC
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHY 183 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~a~~~~~~~ 183 (300)
+|+|+.+|++..+.+++..|+++||||+|++| +.+.++.++|.++++++++.+.++.|+- ..+..+.++++. ...
T Consensus 111 vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~i 188 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIEN--GDI 188 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHT--TTT
T ss_pred CcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhc--CCC
Confidence 99999999999999999999999999999999 8999999999999999999998888764 344444444432 223
Q ss_pred CCeEEEEc
Q 022250 184 KNVEIVES 191 (300)
Q Consensus 184 ~dieIiE~ 191 (300)
-++..++.
T Consensus 189 G~i~~v~~ 196 (417)
T 3v5n_A 189 GAVRLVQM 196 (417)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 45555554
No 58
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=99.55 E-value=1.6e-14 Score=137.35 Aligned_cols=146 Identities=14% Similarity=0.189 Sum_probs=114.1
Q ss_pred cceEEEEcCCchHHHH-HH----HHHHhcCCcEEE---------EEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHh
Q 022250 35 NIKVIINGAVKEIGRA-AV----IAVTKARGMEVA---------GAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLG 99 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~----~~i~~~~~~eLv---------g~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~ 99 (300)
++||+|+|++|.||+. ++ +.+.+.++++|+ +++|++. ..+..++ ..++++ +|+|++++++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~--~~a~~~a---~~~~~~~~~~~~~~ll~ 80 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSA--EKVEALA---KRFNIARWTTDLDAALA 80 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSS--HHHHHHH---HHTTCCCEESCHHHHHH
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCH--HHHHHHH---HHhCCCcccCCHHHHhc
Confidence 6999999944999998 88 888888877765 6888654 2333333 356774 7999999997
Q ss_pred cccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHH
Q 022250 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAA 176 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a 176 (300)
+.++|+|+.+|++..+.+++..|+++||||++++| +.+.++.++|.++|+++++.+.++.| |...+..+.++.
T Consensus 81 ----~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i 156 (383)
T 3oqb_A 81 ----DKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLR 156 (383)
T ss_dssp ----CSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHH
T ss_pred ----CCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHHHHH
Confidence 36799999999999999999999999999999999 79999999999999999999888887 455555555554
Q ss_pred HHhccCCCCeEEEEc
Q 022250 177 ISASFHYKNVEIVES 191 (300)
Q Consensus 177 ~~~~~~~~dieIiE~ 191 (300)
+. ...-++.-++.
T Consensus 157 ~~--g~iG~i~~~~~ 169 (383)
T 3oqb_A 157 DS--GFFGRILSVRG 169 (383)
T ss_dssp HT--TTTSSEEEEEE
T ss_pred Hc--CCCCCcEEEEE
Confidence 32 12334544443
No 59
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=99.54 E-value=2.9e-14 Score=138.68 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=110.1
Q ss_pred cceEEEEcC---CchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCcc---eecCHHHHHhcccccCCc
Q 022250 35 NIKVIINGA---VKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP---VMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 35 ~ikV~V~Ga---~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~---v~~dl~~~l~~~~~~~~~ 107 (300)
++||+|+|+ .|.||+.+++.+.+. ++++|++++|++. ..+..++ ..++++ +|+|++++++ +.++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~~ll~----~~~v 90 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKI--ETSIATI---QRLKLSNATAFPTLESFAS----SSTI 90 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSH--HHHHHHH---HHTTCTTCEEESSHHHHHH----CSSC
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCH--HHHHHHH---HHcCCCcceeeCCHHHHhc----CCCC
Confidence 599999998 499999999999988 8999999999753 1222232 234554 8999999997 3579
Q ss_pred cEEEEcCCchhHHHHHHHHHHcC------CCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHH
Q 022250 108 AVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAI 177 (300)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G------~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~ 177 (300)
|+|+.+|++..+.+.+..|+++| |||+|++| +.+.++.++|.++|+++++.++++-| |...+.-+.++.+
T Consensus 91 D~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 169 (438)
T 3btv_A 91 DMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELIS 169 (438)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHHH
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHHH
Confidence 99999999999999999999999 99999998 78999999999999999988887766 4555555555554
No 60
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.53 E-value=5.6e-14 Score=136.98 Aligned_cols=149 Identities=18% Similarity=0.102 Sum_probs=110.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh----cC--c--------------CCCCcceecC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----DM--E--------------QPLEIPVMSD 93 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~----g~--~--------------~~~gv~v~~d 93 (300)
.++||+|+|+ |+||+.+++.+.+.++++|++++|++. ..+..++ |. . ....+.+|+|
T Consensus 22 k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~--era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 22 KPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRL--PNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSST--HHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred CceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCH--HHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 3699999998 999999999999999999999999754 2222221 20 0 0113568999
Q ss_pred HHHHHhcccccCCccEEEEcCC-chhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 94 LTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~-p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
++++++ +.++|+||++|+ |+.+.+++..|+++|||||+.++.++.++.++|.++|+++|+.+.++..=..+ .+
T Consensus 99 ~eeLL~----d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~--~~ 172 (446)
T 3upl_A 99 NDLILS----NPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPS--SC 172 (446)
T ss_dssp HHHHHT----CTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHH--HH
T ss_pred HHHHhc----CCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchH--HH
Confidence 999997 367999999995 67789999999999999999887777778899999999999887777654444 44
Q ss_pred HHHHHHhccCCCCeEEEEc
Q 022250 173 QQAAISASFHYKNVEIVES 191 (300)
Q Consensus 173 ~~~a~~~~~~~~dieIiE~ 191 (300)
.++.+.+..-.+.+-....
T Consensus 173 ~eLv~~a~~~G~~~v~~Gk 191 (446)
T 3upl_A 173 MELIEFVSALGYEVVSAGK 191 (446)
T ss_dssp HHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHhCCCeEEEecc
Confidence 4554433222344444443
No 61
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=99.52 E-value=8.6e-14 Score=130.04 Aligned_cols=144 Identities=10% Similarity=0.073 Sum_probs=111.6
Q ss_pred cceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCC-CcceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
|+||+|+|+ |.||. .+++.+. .++++|++++|++. ..+..++ ..+ ++++|+|++++++ +.++|+|+.
T Consensus 4 ~~rvgiiG~-G~~~~~~~~~~l~-~~~~~lvav~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~----~~~~D~V~i 72 (336)
T 2p2s_A 4 KIRFAAIGL-AHNHIYDMCQQLI-DAGAELAGVFESDS--DNRAKFT---SLFPSVPFAASAEQLIT----DASIDLIAC 72 (336)
T ss_dssp CCEEEEECC-SSTHHHHHHHHHH-HTTCEEEEEECSCT--TSCHHHH---HHSTTCCBCSCHHHHHT----CTTCCEEEE
T ss_pred ccEEEEECC-ChHHHHHhhhhhc-CCCcEEEEEeCCCH--HHHHHHH---HhcCCCcccCCHHHHhh----CCCCCEEEE
Confidence 699999998 99996 5777765 57999999999754 2222232 234 5678999999996 357999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCC--cHH-HHHHHHHHHHhccCCCCeEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIG-SILLQQAAISASFHYKNVEI 188 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~--SiG-v~ll~~~a~~~~~~~~dieI 188 (300)
+|++..+.+.+..|+++|+||+|++| ..+.++.++|.++++++++.+.++-|+ ... +..+.++.+. ...-++.-
T Consensus 73 ~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~--g~iG~i~~ 150 (336)
T 2p2s_A 73 AVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQR--GEIGRVIQ 150 (336)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHT--TTTSSEEE
T ss_pred eCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhC--CCCCceEE
Confidence 99999999999999999999999998 789999999999999999988887775 434 5556665542 12335544
Q ss_pred EEc
Q 022250 189 VES 191 (300)
Q Consensus 189 iE~ 191 (300)
++.
T Consensus 151 v~~ 153 (336)
T 2p2s_A 151 TMG 153 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 62
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=99.51 E-value=5.8e-14 Score=130.66 Aligned_cols=133 Identities=11% Similarity=0.087 Sum_probs=104.9
Q ss_pred CcceEEEEcCCchHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-ecCHHHHHhcccccCCccEEE
Q 022250 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVVI 111 (300)
||+||+|+|+ |+||+ .+++.+.+.++++|+ ++|++. ..+..++ ..++++. +.|..++++ .++|+|+
T Consensus 1 m~~~igiIG~-G~ig~~~~~~~l~~~~~~~l~-v~d~~~--~~~~~~a---~~~g~~~~~~~~~~~l~-----~~~D~V~ 68 (323)
T 1xea_A 1 MSLKIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTRNP--KVLGTLA---TRYRVSATCTDYRDVLQ-----YGVDAVM 68 (323)
T ss_dssp -CEEEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECSCH--HHHHHHH---HHTTCCCCCSSTTGGGG-----GCCSEEE
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHhCCCceEE-EEeCCH--HHHHHHH---HHcCCCccccCHHHHhh-----cCCCEEE
Confidence 5799999998 99998 599999888899999 998753 2222333 2456653 444444554 5799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCC--CcHHHHHHHHHHHH
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAIS 178 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N--~SiGv~ll~~~a~~ 178 (300)
.+|+|..+.+.+..|+++|++|++++| ..+.++.++|.++++++++.++.+-| |...+..+.++.+.
T Consensus 69 i~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~ 138 (323)
T 1xea_A 69 IHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQ 138 (323)
T ss_dssp ECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHH
T ss_pred EECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhc
Confidence 999999999999999999999999998 78889999999999999998887766 46676666666544
No 63
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.41 E-value=1.7e-13 Score=128.95 Aligned_cols=140 Identities=14% Similarity=0.103 Sum_probs=106.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc--------CCcEEEEEEecCCCC---cchhhhhcCcCCCCcceec--CHHHHHhcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSVG---EDIGMVCDMEQPLEIPVMS--DLTMVLGSI 101 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--------~~~eLvg~vd~~~~g---~d~~~~~g~~~~~gv~v~~--dl~~~l~~~ 101 (300)
|+||+|+|+ |.||+.+++.+.+. ++++|++++|++..- .+...+... .....++|+ |++++++.
T Consensus 2 mirvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~-~~~~~~~~~~~d~~~ll~~- 78 (327)
T 3do5_A 2 MIKIAIVGF-GTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRM-KRETGMLRDDAKAIEVVRS- 78 (327)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHH-HHHHSSCSBCCCHHHHHHH-
T ss_pred cEEEEEEec-cHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhh-hccCccccCCCCHHHHhcC-
Confidence 699999998 99999999999887 899999999975310 011111100 001123555 99999973
Q ss_pred cccCCccEEEEcCCchhH----HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHH
Q 022250 102 SQSKARAVVIDFTDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAI 177 (300)
Q Consensus 102 ~~~~~~DVVIDfT~p~~~----~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~ 177 (300)
.++|+|||+|+++.+ .+++..|+++|+|||++..+.-..+.++|.++|+++++.+++-++..-|.-++..+-+
T Consensus 79 ---~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l~~ 155 (327)
T 3do5_A 79 ---ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKR 155 (327)
T ss_dssp ---SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHHHT
T ss_pred ---CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHHHH
Confidence 689999999988776 8999999999999999977654457889999999999999999988888777766655
Q ss_pred Hhc
Q 022250 178 SAS 180 (300)
Q Consensus 178 ~~~ 180 (300)
.+.
T Consensus 156 ~l~ 158 (327)
T 3do5_A 156 YLA 158 (327)
T ss_dssp TTT
T ss_pred Hhh
Confidence 443
No 64
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.41 E-value=3.7e-13 Score=131.35 Aligned_cols=134 Identities=14% Similarity=0.166 Sum_probs=108.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHh---------cCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTK---------ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~---------~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
++||+|+|+ |.||+.+++.+.+ .++++|++++|++. .....++ .+.++|+|++++++ +.
T Consensus 10 ~irIgIIG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~--~~~~~~~-----~~~~~~~d~~ell~----d~ 77 (444)
T 3mtj_A 10 PIHVGLLGL-GTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNL--DKAEALA-----GGLPLTTNPFDVVD----DP 77 (444)
T ss_dssp CEEEEEECC-HHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCH--HHHHHHH-----TTCCEESCTHHHHT----CT
T ss_pred cccEEEECC-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCH--HHhhhhc-----ccCcccCCHHHHhc----CC
Confidence 589999998 9999999987764 27899999999753 1222222 14578999999997 36
Q ss_pred CccEEEEcCCc-hhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhc
Q 022250 106 ARAVVIDFTDA-STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS 180 (300)
Q Consensus 106 ~~DVVIDfT~p-~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~ 180 (300)
++|+|+++|++ +.+.+++..|+++|+|||+++++++.++.++|.++|+++|+.+.+-++..-|.-++..+-+.++
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~LrelL~ 153 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGLT 153 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHHHTTTT
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHHHHHHh
Confidence 89999999985 8999999999999999999999877888899999999999998887777777666665554443
No 65
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.39 E-value=2.9e-13 Score=127.28 Aligned_cols=148 Identities=20% Similarity=0.186 Sum_probs=109.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc------CCcEEEEEEecCCC--C--cchhhhhcCcCCCC-cc--eecCHHHHHhcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA------RGMEVAGAIDSHSV--G--EDIGMVCDMEQPLE-IP--VMSDLTMVLGSI 101 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~------~~~eLvg~vd~~~~--g--~d~~~~~g~~~~~g-v~--v~~dl~~~l~~~ 101 (300)
++||+|+|+ |+||+.+++.+.+. ++++|+++.|++.. . .|...+.....+.+ ++ .+ |.++++.
T Consensus 4 ~irVgIiG~-G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~-- 79 (325)
T 3ing_A 4 EIRIILMGT-GNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLM-- 79 (325)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGT--
T ss_pred eEEEEEEcC-cHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhc--
Confidence 599999998 99999999999876 78999999997531 1 11211110000111 11 23 6677775
Q ss_pred cccCCccEEEEcCCchh----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHH
Q 022250 102 SQSKARAVVIDFTDAST----VYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAI 177 (300)
Q Consensus 102 ~~~~~~DVVIDfT~p~~----~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~ 177 (300)
+.++|||||+|++.. ..+++..|+++|+|||++++++..++.++|.++|+++++.+++-+++.-|..++..+-+
T Consensus 80 --~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~~ 157 (325)
T 3ing_A 80 --GEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDY 157 (325)
T ss_dssp --TSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHH
T ss_pred --CCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHHH
Confidence 368999999997654 37999999999999999988766688999999999999999999999999877766655
Q ss_pred HhccCCCCeEEEE
Q 022250 178 SASFHYKNVEIVE 190 (300)
Q Consensus 178 ~~~~~~~dieIiE 190 (300)
.++ ...+.-++
T Consensus 158 ~l~--g~~I~~i~ 168 (325)
T 3ing_A 158 SIL--PSKVKRFR 168 (325)
T ss_dssp TCT--TCCEEEEE
T ss_pred Hhh--CCCeeEEE
Confidence 553 24454444
No 66
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=99.37 E-value=3.9e-12 Score=115.45 Aligned_cols=198 Identities=16% Similarity=0.085 Sum_probs=130.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-|||+++|+ |.||+.+++. . ++||+++++ .+. ++ .++.+++|++++++ ++|+||++.
T Consensus 12 ~~rV~i~G~-GaIG~~v~~~---~-~leLv~v~~-~k~----ge-------lgv~a~~d~d~lla------~pD~VVe~A 68 (253)
T 1j5p_A 12 HMTVLIIGM-GNIGKKLVEL---G-NFEKIYAYD-RIS----KD-------IPGVVRLDEFQVPS------DVSTVVECA 68 (253)
T ss_dssp CCEEEEECC-SHHHHHHHHH---S-CCSEEEEEC-SSC----CC-------CSSSEECSSCCCCT------TCCEEEECS
T ss_pred cceEEEECc-CHHHHHHHhc---C-CcEEEEEEe-ccc----cc-------cCceeeCCHHHHhh------CCCEEEECC
Confidence 489999997 9999999997 4 999999998 432 22 26677899999983 899999999
Q ss_pred CchhHHHHHHHHHHcCCCEEEeCCC-C-CHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccCCCCeEEEEc-
Q 022250 115 DASTVYDNVKQATAFGMRSVVYVPH-I-QLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVES- 191 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigTTG-~-~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~~dieIiE~- 191 (300)
.++++.+++..++++|+++|+..+| | +++..++|+++|++.+..+ +.|.-.+|..-..++++ .....+.++=+
T Consensus 69 ~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l-~vpSGAi~GlD~l~aa~---g~l~~V~~~t~K 144 (253)
T 1j5p_A 69 SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARV-FFPSGAIGGLDVLSSIK---DFVKNVRIETIK 144 (253)
T ss_dssp CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEE-ECCCTTCCCHHHHHHHG---GGEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeE-EecCCcccchhHHHHhc---CCccEEEEEEeC
Confidence 9999999999999999999999887 3 5566789999999999884 45555555522223332 22234444433
Q ss_pred cCC--CCC--CC----chHHHHHHHHHHhcCCccccCccccccccccccccCCCeeEEEEEcCCCCe-eEEEEEccCCcE
Q 022250 192 RPN--ARD--FP----SPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPS-STTVYFSRPGEV 262 (300)
Q Consensus 192 Hh~--K~D--aP----SGTA~~l~~~i~~~~~~~~r~~~~~~~~~rg~~~~~~~i~i~s~R~g~ivg-~H~V~f~~~~E~ 262 (300)
|.. +.+ .| +|||. |++..++++.|..-...+ +-|- +...+.+-+- |++-+ .|+|...|++.+
T Consensus 145 ~P~~~~~~l~e~~~~feG~ar---eA~~~fP~N~NVaaa~aL--A~G~--d~t~v~l~aD--P~~~~n~H~I~v~g~~g~ 215 (253)
T 1j5p_A 145 PPKSLGLDLKGKTVVFEGSVE---EASKLFPRNINVASTIGL--IVGF--EKVKVTIVAD--PAMDHNIHIVRISSAIGN 215 (253)
T ss_dssp CGGGGTCCCSSCEEEEEECHH---HHHHHCSSSCHHHHHHHH--HHCG--GGEEEEEEEC--TTCSSCEEEEEEEESSCE
T ss_pred ChHHhCcccccceEEEEEcHH---HHHHHcCccHHHHHHHHH--hcCC--CccEEEEEEc--CCCCCcEEEEEEEecCcE
Confidence 322 222 23 88998 444444432221100001 1110 0012223322 34433 699999999999
Q ss_pred EEEEEE
Q 022250 263 YSIKHD 268 (300)
Q Consensus 263 iel~H~ 268 (300)
++++-+
T Consensus 216 ~~~~~~ 221 (253)
T 1j5p_A 216 YEFKIE 221 (253)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888644
No 67
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.35 E-value=8e-13 Score=124.43 Aligned_cols=140 Identities=16% Similarity=0.102 Sum_probs=104.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC-------CcEEEEEEecCCC-Ccc---hhhhhcCcCCCCcc-eec---CHHHHHh
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR-------GMEVAGAIDSHSV-GED---IGMVCDMEQPLEIP-VMS---DLTMVLG 99 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-------~~eLvg~vd~~~~-g~d---~~~~~g~~~~~gv~-v~~---dl~~~l~ 99 (300)
++||+|+|+ |.||+.+++.+.+.+ +++|+++.|++.. ..+ ...+.....+.+++ +++ |++++++
T Consensus 6 ~irvgIiG~-G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~ 84 (331)
T 3c8m_A 6 TINLSIFGL-GNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALA 84 (331)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHH
T ss_pred EEeEEEEec-CHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhC
Confidence 499999998 999999999998766 6899999997531 011 11111000012443 566 9999984
Q ss_pred cccccCCccEEEEcCCch----hHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH
Q 022250 100 SISQSKARAVVIDFTDAS----TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~----~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~ 175 (300)
.++|+|||+|++. .+.+++..|+++|||||+.......++.++|.++|+++++.+.+-++..-|..++..+
T Consensus 85 -----~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~l 159 (331)
T 3c8m_A 85 -----RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSFI 159 (331)
T ss_dssp -----SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHH
T ss_pred -----CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHHH
Confidence 6899999999874 8899999999999999997544335678899999999999999988888886666555
Q ss_pred HHHhc
Q 022250 176 AISAS 180 (300)
Q Consensus 176 a~~~~ 180 (300)
-+.++
T Consensus 160 ~~~l~ 164 (331)
T 3c8m_A 160 DYSVL 164 (331)
T ss_dssp HHHST
T ss_pred HHHhh
Confidence 55444
No 68
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=99.33 E-value=5.3e-12 Score=118.93 Aligned_cols=124 Identities=16% Similarity=0.225 Sum_probs=99.8
Q ss_pred cceEEEEcCCchHHHHHHHH--HHhcCCcEEEEEEecCCCC--cchhhhhcCcCCCCcceecCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIA--VTKARGMEVAGAIDSHSVG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~--i~~~~~~eLvg~vd~~~~g--~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVV 110 (300)
.+||.|.|++|||++.+++. +.+.++.++|+.+++...| +++. .|. ...|+|+|++++++.++ ..++|++
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~--~G~-~~~Gvpvy~sv~ea~~~---~p~~Dla 83 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFY--WGH-KEILIPVFKNMADAMRK---HPEVDVL 83 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEE--ETT-EEEEEEEESSHHHHHHH---CTTCCEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEe--ccC-ccCCceeeCCHHHHhhc---CCCCcEE
Confidence 58999999999999888876 6667899999999986533 3431 232 34689999999998852 1158999
Q ss_pred EEcCCchhHHHHHHHHHH-cCCCEEEe-CCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 111 IDFTDASTVYDNVKQATA-FGMRSVVY-VPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~-~G~~vVig-TTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
|+|++|..+.+.+..+++ +|++.|+. |+|+++++..+|.++|+++++. ++.||-
T Consensus 84 Vi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~r-liGPNc 139 (334)
T 3mwd_B 84 INFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVT-IIGPAT 139 (334)
T ss_dssp EECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCE-EECSSC
T ss_pred EEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEccCC
Confidence 999999998887777776 99987777 7899998889999999999984 788983
No 69
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.21 E-value=4.3e-11 Score=113.79 Aligned_cols=166 Identities=16% Similarity=0.150 Sum_probs=111.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcC---CcEEEEEEecCCCCcchhhhhcCcCCC-CcceecCHHHHHhcc--------
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKAR---GMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSI-------- 101 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~---~~eLvg~vd~~~~g~d~~~~~g~~~~~-gv~v~~dl~~~l~~~-------- 101 (300)
.++||+|+|+ |.||+.+++.+.+.+ +++|+++.|+.. . .+. .++ |++.++|++++++..
T Consensus 3 k~i~vgIiG~-G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~---~~~---~~~~gi~~~~~~~e~l~~~~~~~~did 73 (358)
T 1ebf_A 3 KVVNVAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAER--S---LIS---KDFSPLNVGSDWKAALAASTTKTLPLD 73 (358)
T ss_dssp SEEEEEEECC-SHHHHHHHHHHHHCCCSSEEEEEEEECSSB--E---EEC---SSCSCCSCTTCHHHHHHTCCCBCCCHH
T ss_pred ceEEEEEEec-CHHHHHHHHHHHhcCCCCCEEEEEEEECCh--h---hhc---cccCCCCccccHHHHHhcccCCCCCHH
Confidence 3699999998 999999999998876 689999999642 1 111 233 555566777766420
Q ss_pred ------cccCCccEEEEcCCchhHHHHHHHHHHcCCCEEE--eCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 102 ------SQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV--YVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 102 ------~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVi--gTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
.....+|||||+|....+.+....|+++|||||+ .++ ..+.++.++|. +|+++|+.+.|-++..-|.-++
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~giPii 152 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGAGLPII 152 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTTTSSCH
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEccccccCCcHH
Confidence 0001238999999877777777899999999999 455 56668889999 9999999888877666664444
Q ss_pred HHHHHHhccCCCCeEEEEc----------cC-C---CCCCCchHHHHHHHHH
Q 022250 173 QQAAISASFHYKNVEIVES----------RP-N---ARDFPSPDATQIANNL 210 (300)
Q Consensus 173 ~~~a~~~~~~~~dieIiE~----------Hh-~---K~DaPSGTA~~l~~~i 210 (300)
..+-+.+.. ...+.-++- +. . ....|--+|++-|+.+
T Consensus 153 ~~l~~~l~~-G~~I~~I~GIlnGT~nyil~~m~~~~~~g~~f~~~l~eAq~~ 203 (358)
T 1ebf_A 153 SFLREIIQT-GDEVEKIEGIFSGTLSYIFNEFSTSQANDVKFSDVVKVAKKL 203 (358)
T ss_dssp HHHHHHHHH-TCCEEEEEEECCHHHHHHHHHHSCSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCeEEEEEEEeecceeeecccccccccCCCHHHHHHHHHHc
Confidence 444333311 123433333 22 1 4455666677666654
No 70
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.16 E-value=8.9e-11 Score=110.41 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=76.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---cCc------------CCCCcceecCHHHHH
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME------------QPLEIPVMSDLTMVL 98 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---g~~------------~~~gv~v~~dl~~~l 98 (300)
||+||+|+|+ |+||+.+++.+.+.|+++|+++.|++. +.+..++ |+. ...++.++.|+++++
T Consensus 1 M~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~~--~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKP--DFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSC--SHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred CCcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCCH--HHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5799999998 999999999999999999999999642 2222222 110 001235677899988
Q ss_pred hcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCC
Q 022250 99 GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG 139 (300)
. ++|+|+++|++..+.+.+..++++|++|++.++.
T Consensus 78 ~------~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap~ 112 (334)
T 2czc_A 78 E------KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGE 112 (334)
T ss_dssp T------TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred c------CCCEEEECCCccccHHHHHHHHHcCCceEeeccc
Confidence 3 7999999999999999999999999999988663
No 71
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=99.14 E-value=4.4e-10 Score=104.61 Aligned_cols=115 Identities=13% Similarity=0.151 Sum_probs=94.7
Q ss_pred ceEEEE-cCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 36 IKVIIN-GAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 36 ikV~V~-Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.++|+ |++|++|+.+++.+.+ .+++++..+++...|.. -.|+++|.+++++.++ .++|++|.|+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~-~G~~~v~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~vD~avI~v 79 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALE-YGTNLVGGTTPGKGGKT---------HLGLPVFNTVKEAKEQ----TGATASVIYV 79 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-HTCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CcEEEEECCCCCHHHHHHHHHHH-CCCcEEEEeCCCcCcce---------ECCeeeechHHHhhhc----CCCCEEEEec
Confidence 346777 9999999999998875 57888877876542211 2578999999999741 3799999999
Q ss_pred CchhHHHHHHHHHHcCCCE-EEeCCCCCHHHHHHHHHHhhhC-CCeEEEcCCC
Q 022250 115 DASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKA-SMGCLIAPTL 165 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~v-VigTTG~~~e~~~~L~~~a~~~-~i~iv~a~N~ 165 (300)
+|+.+.+.++.|++.|++. |+-++|++.++..++.++++++ ++. ++.||.
T Consensus 80 P~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~-liGPnc 131 (305)
T 2fp4_A 80 PPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR-LIGPNC 131 (305)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE-EECSSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE-EEeCCC
Confidence 9999999999999999998 6778899887778899999998 887 677885
No 72
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=99.08 E-value=9.1e-11 Score=110.50 Aligned_cols=124 Identities=14% Similarity=0.131 Sum_probs=94.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC--------CcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR--------GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~--------~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
++||+|+|+ |.||+.+++.+.+.+ +++|++++|++.. ....+ . ...+++|+++++ +
T Consensus 3 ~irvgIiG~-G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~--~~~~~-----~-~~~~~~d~~~ll-------~ 66 (332)
T 2ejw_A 3 ALKIALLGG-GTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR--KPRAI-----P-QELLRAEPFDLL-------E 66 (332)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT--SCCSS-----C-GGGEESSCCCCT-------T
T ss_pred eeEEEEEcC-CHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH--Hhhcc-----C-cccccCCHHHHh-------C
Confidence 589999998 999999999998877 7899999997531 11111 0 124677888875 5
Q ss_pred ccEEEEcCCch-hHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHH
Q 022250 107 RAVVIDFTDAS-TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAA 176 (300)
Q Consensus 107 ~DVVIDfT~p~-~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a 176 (300)
+|+||++|.+. .+.++++.|+++|||||+.......++.++|.++|+++ .+++.++..-|.-++..+-
T Consensus 67 iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~--~~~~Ea~vg~giPii~~l~ 135 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPALSFLE 135 (332)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT--CEECGGGTTTTSSSHHHHH
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC--CeEEEEEcccCCHHHHHHH
Confidence 89999999765 56889999999999999964433346788999999986 7888887777754444443
No 73
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.01 E-value=9.1e-10 Score=102.76 Aligned_cols=101 Identities=21% Similarity=0.235 Sum_probs=77.3
Q ss_pred CcceEEEEcCCchHHHHHHHHHHh-cCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-ecCHHHHHhcccccCCccEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTK-ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~-~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVVI 111 (300)
+++||+|+|+ |.||+.+++.+.+ .+++++++++|++.. .+...++ ..+|++. +++++++++.- ...++|+|+
T Consensus 3 ~~irVaIIG~-G~iG~~~~~~l~~~~~~~elvav~d~~~~-~~~~~~a---~~~g~~~~~~~~e~ll~~~-~~~~iDvV~ 76 (312)
T 1nvm_B 3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYLEMGAMVGIDAA-SDGLARA---QRMGVTTTYAGVEGLIKLP-EFADIDFVF 76 (312)
T ss_dssp SCEEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEECSCTT-CHHHHHH---HHTTCCEESSHHHHHHHSG-GGGGEEEEE
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHhhCcCeEEEEEEeCChh-hhHHHHH---HHcCCCcccCCHHHHHhcc-CCCCCcEEE
Confidence 3699999997 9999999999866 899999999997531 1011222 2355553 56788887510 003689999
Q ss_pred EcCCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 112 DFTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
++|+++.+.+++..|+++ |++|++.++-+
T Consensus 77 ~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~ 107 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQAKPGIRLIDLTPAA 107 (312)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEECSTTC
T ss_pred ECCChHHHHHHHHHHHHhCCCCEEEEcCccc
Confidence 999999999999999999 99999999853
No 74
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.88 E-value=1.6e-08 Score=83.87 Aligned_cols=112 Identities=16% Similarity=0.109 Sum_probs=88.6
Q ss_pred ceEEEEcCC---chHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
.+|+|+|++ |+||..+++.+.+ .++++.. +++. + .+ -.|+++|.+++++. ..+|++|.
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~-~G~~v~~-Vnp~--~---~~------i~G~~~y~sl~~l~------~~vDlvvi 83 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLE-HGYDVYP-VNPK--Y---EE------VLGRKCYPSVLDIP------DKIEVVDL 83 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHH-TTCEEEE-ECTT--C---SE------ETTEECBSSGGGCS------SCCSEEEE
T ss_pred CEEEEEccCCCCCchHHHHHHHHHH-CCCEEEE-ECCC--C---Ce------ECCeeccCCHHHcC------CCCCEEEE
Confidence 679999997 7999999998875 5787433 3332 1 11 24788999999885 47999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~l 171 (300)
|++++.+.+.++.|++.|++.++-++|... +++.++++++|+. ++.|| ++|+..
T Consensus 84 ~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~---~~l~~~a~~~Gi~-vvGpn-c~gv~~ 137 (144)
T 2d59_A 84 FVKPKLTMEYVEQAIKKGAKVVWFQYNTYN---REASKKADEAGLI-IVANR-CMMREH 137 (144)
T ss_dssp CSCHHHHHHHHHHHHHHTCSEEEECTTCCC---HHHHHHHHHTTCE-EEESC-CHHHHH
T ss_pred EeCHHHHHHHHHHHHHcCCCEEEECCCchH---HHHHHHHHHcCCE-EEcCC-chhhcc
Confidence 999999999999999999999988888652 4688889999998 56677 788654
No 75
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=98.87 E-value=6.9e-09 Score=97.90 Aligned_cols=134 Identities=15% Similarity=0.194 Sum_probs=85.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc---------------CcCCCCcceecCHHHHHh
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD---------------MEQPLEIPVMSDLTMVLG 99 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g---------------~~~~~gv~v~~dl~~~l~ 99 (300)
|+||+|+|+ |+||+.+++++.++|++||+++.|... ......+. + ...++++.++++++++
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~--~~~~~~a~~~g~~~~~~~~~~~~~-~~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSP--NYEAFIAHRRGIRIYVPQQSIKKF-EESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSC--SHHHHHHHHTTCCEECCGGGHHHH-HTTTCCCCCCHHHHHH
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCCh--HHHHHHHHhcCcceecCcCHHHHh-cccccccccCHhHhhc
Confidence 589999999 999999999999999999999998642 11111110 0 1223444445556553
Q ss_pred cccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHH---HHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHH
Q 022250 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLE---TVSALSAFCDKASMGCLIAPTLSIGSILLQQAA 176 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e---~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a 176 (300)
++|+|+++|.+..+.+++..++++|+++|.-+.-+..+ .+-......+..+-.++ +|=|-..|-+..++
T Consensus 77 ------~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~~~iI--snpsCtt~~l~~~l 148 (340)
T 1b7g_O 77 ------TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALGKKYI--RVVSCNTTALLRTI 148 (340)
T ss_dssp ------HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTTCSEE--EECCHHHHHHHHHH
T ss_pred ------CCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcCCCCc--ccCCcHHHHHHHHH
Confidence 68999999999999999999999999988654321110 00000111111122333 46677777666656
Q ss_pred HHhc
Q 022250 177 ISAS 180 (300)
Q Consensus 177 ~~~~ 180 (300)
+.+.
T Consensus 149 k~L~ 152 (340)
T 1b7g_O 149 CTVN 152 (340)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 76
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=98.84 E-value=8.5e-09 Score=97.60 Aligned_cols=122 Identities=13% Similarity=0.106 Sum_probs=96.4
Q ss_pred CCCcceEEEEcCCchHHHHHHHHH---Hhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAV---TKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i---~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (300)
++..-|++|+|- |.||+..++.. ... +.+++||++ ++..|+|++++.+- ...++++++|++++++ ..+
T Consensus 19 ~~~~~~~vi~~~-g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g-~~~gipv~~d~~~al~-----~~~ 90 (350)
T 2g0t_A 19 YQPGTPAAIVAW-GQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKP-VRYDVPVVSSVEKAKE-----MGA 90 (350)
T ss_dssp SCTTEEEEEECT-TTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC--CCSCCBEESSHHHHHH-----TTC
T ss_pred hCcCCCEEEEeC-CCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCC-CCCCceeeCCHHHHHh-----cCC
Confidence 334578999996 99999988855 555 679999999 88899999998832 2589999999999997 579
Q ss_pred cEEEEcC------CchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEc
Q 022250 108 AVVIDFT------DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIA 162 (300)
Q Consensus 108 DVVIDfT------~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a 162 (300)
|++|..+ .|+...+.+..|+++|++||+|--.+ ..+..+|.++|+++|+.++-.
T Consensus 91 d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~-l~~~pel~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 91 EVLIIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFK-ISQQTEFLKIAHENGTRIIDI 150 (350)
T ss_dssp CEEEECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHTCCEEES
T ss_pred CEEEEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhh-hhCCHHHHHHHHHCCCEEEEe
Confidence 9999765 34566789999999999999987654 234456888999887776654
No 77
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=98.84 E-value=8.7e-09 Score=97.08 Aligned_cols=96 Identities=20% Similarity=0.228 Sum_probs=73.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCc---------------CCCCcceecCHHHHHh
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME---------------QPLEIPVMSDLTMVLG 99 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~---------------~~~gv~v~~dl~~~l~ 99 (300)
|+||+|+|+ |+||+.+++.+.++|+++|+++.|... .....+++.. ...++.+..+.++++.
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~--~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~ 77 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRP--DFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD 77 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSC--SHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCCh--hHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc
Confidence 589999999 999999999999899999999988642 1111111100 0113334446777763
Q ss_pred cccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCC
Q 022250 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG 139 (300)
++|+|+++|++..+.+++..++++|++||+.++.
T Consensus 78 ------~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 78 ------EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp ------TCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred ------CCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 7899999999999999999999999999888776
No 78
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.81 E-value=2.8e-09 Score=100.83 Aligned_cols=122 Identities=23% Similarity=0.267 Sum_probs=85.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVID 112 (300)
+|||+|+|| |+||+.+++.+.+..++. ++|... +.+..+........+.+ .+++++++ .++|+||.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~~~v~---~~~~~~--~~~~~~~~~~~~~~~d~~d~~~l~~~~------~~~DvVi~ 83 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDEFDVY---IGDVNN--ENLEKVKEFATPLKVDASNFDKLVEVM------KEFELVIG 83 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTTSEEE---EEESCH--HHHHHHTTTSEEEECCTTCHHHHHHHH------TTCSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhcCCCeE---EEEcCH--HHHHHHhccCCcEEEecCCHHHHHHHH------hCCCEEEE
Confidence 589999999 999999999987654433 334321 11111110000111111 22445555 47899999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI 170 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ 170 (300)
..+|..+...++.|+++|+|+|- ++ +..++..+|.+.|+++|+.++...-|..|+.
T Consensus 84 ~~p~~~~~~v~~~~~~~g~~yvD-~s-~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~ 139 (365)
T 3abi_A 84 ALPGFLGFKSIKAAIKSKVDMVD-VS-FMPENPLELRDEAEKAQVTIVFDAGFAPGLS 139 (365)
T ss_dssp CCCGGGHHHHHHHHHHHTCEEEE-CC-CCSSCGGGGHHHHHHTTCEEECCCBTTTBHH
T ss_pred ecCCcccchHHHHHHhcCcceEe-ee-ccchhhhhhhhhhccCCceeeecCCCCCchH
Confidence 99999999999999999999996 33 3334556789999999999999999999975
No 79
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.81 E-value=3.7e-08 Score=81.20 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=86.7
Q ss_pred cceEEEEcCC---chHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
+.+|+|+|++ |+||+.+++.+.+ .++++. .+++.. .+ -.|+++|.|++++. .++|++|
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~-~G~~V~-~vnp~~-----~~------i~G~~~~~s~~el~------~~vDlvi 74 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLS-KGFEVL-PVNPNY-----DE------IEGLKCYRSVRELP------KDVDVIV 74 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHH-TTCEEE-EECTTC-----SE------ETTEECBSSGGGSC------TTCCEEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHH-CCCEEE-EeCCCC-----Ce------ECCeeecCCHHHhC------CCCCEEE
Confidence 4789999976 9999999999875 578833 344431 11 24788999999886 3799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHH
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI 170 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ 170 (300)
-+.+++.+.+.++.|++.|++.++-.++-. .+++.++++++|+. ++.|| ++|+.
T Consensus 75 i~vp~~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~-~igpn-c~g~~ 128 (138)
T 1y81_A 75 FVVPPKVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVE-YSFGR-CIMVE 128 (138)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCE-EECSC-CHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCE-EEcCC-cceEE
Confidence 999999999999999999998877766432 24678888898988 56777 78864
No 80
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=98.74 E-value=2.6e-08 Score=103.37 Aligned_cols=122 Identities=16% Similarity=0.227 Sum_probs=96.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc-----CCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA-----RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~-----~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (300)
.+||.|.|++|| .+.+++... ++..+|+.+++...|.+...+.|. .+.|+|+|.+++++.+. ..++|+
T Consensus 496 ~trviV~G~tg~---~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~-~~~Gvp~y~sv~ea~~~---~p~~Dl 568 (829)
T 3pff_A 496 HTKAIVWGMQTR---AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGH-KEILIPVFKNMADAMRK---HPEVDV 568 (829)
T ss_dssp TCCEEEESCCHH---HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETT-EEEEEEEESSHHHHHHH---CTTCCE
T ss_pred CCeEEEECCcHH---HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecC-CcCCcccCCcHHHHhhc---cCCCcE
Confidence 589999999977 555555433 678999999987654444333343 35689999999999851 015899
Q ss_pred EEEcCCchhHHHHHHHHHH-cCCCEEEe-CCCCCHHHHHHHHHHhhhCCCeEEEcCC
Q 022250 110 VIDFTDASTVYDNVKQATA-FGMRSVVY-VPHIQLETVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~-~G~~vVig-TTG~~~e~~~~L~~~a~~~~i~iv~a~N 164 (300)
+|.|.++..+.+.++.|++ .|++.++. |.||.+.+..+|.++|+++++. ++.||
T Consensus 569 aVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~r-liGPN 624 (829)
T 3pff_A 569 LINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVT-IIGPA 624 (829)
T ss_dssp EEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCE-EECSS
T ss_pred EEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCE-EEcCC
Confidence 9999999999999999999 99996655 6699988788999999999984 88898
No 81
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.73 E-value=4.2e-08 Score=81.46 Aligned_cols=112 Identities=12% Similarity=0.146 Sum_probs=83.8
Q ss_pred ceEEEEcCC---chHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
.+|+|+|++ |+||..+++.+.+ .+++ +..+++...|.. -.|+++|.|++++. ..+|++|-
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~-~G~~-v~~vnp~~~g~~---------i~G~~~~~sl~el~------~~~Dlvii 76 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLD-QGYH-VIPVSPKVAGKT---------LLGQQGYATLADVP------EKVDMVDV 76 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHH-HTCC-EEEECSSSTTSE---------ETTEECCSSTTTCS------SCCSEEEC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHH-CCCE-EEEeCCcccccc---------cCCeeccCCHHHcC------CCCCEEEE
Confidence 679999987 8999999999875 4677 334555432121 24788999998875 47899999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+++++.+.+.+..|++.|+..|+-.++-. .+++.++++++|+. ++.|| ++|+
T Consensus 77 ~vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~-~igpn-c~g~ 128 (145)
T 2duw_A 77 FRNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLS-VVMDR-CPAI 128 (145)
T ss_dssp CSCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCE-EECSC-CHHH
T ss_pred EeCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCE-EEcCC-eeeE
Confidence 99999999999999999976555445422 24678889999887 55677 8885
No 82
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.71 E-value=5.1e-08 Score=80.54 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=88.5
Q ss_pred ceEEEEcCC---chHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
-+|+|+|++ |+||..+++.+.+ .++++. -+++...+. + -.|+++|.+++++- ..+|++|.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~-~G~~v~-~vnp~~~~~---~------i~G~~~~~sl~el~------~~vDlavi 76 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLRE-QGYRVL-PVNPRFQGE---E------LFGEEAVASLLDLK------EPVDILDV 76 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHH-TTCEEE-EECGGGTTS---E------ETTEECBSSGGGCC------SCCSEEEE
T ss_pred CEEEEECCCCCCCChHHHHHHHHHH-CCCEEE-EeCCCcccC---c------CCCEEecCCHHHCC------CCCCEEEE
Confidence 679999997 8999999999774 578733 344431121 1 24789999999885 47999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~l 171 (300)
|.+++.+.+.++.|.+.|+..++-.+|+.. +++.++|+++|+. ++.|| ++|+..
T Consensus 77 ~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~---~~~~~~a~~~Gir-~vgpn-c~g~~~ 130 (140)
T 1iuk_A 77 FRPPSALMDHLPEVLALRPGLVWLQSGIRH---PEFEKALKEAGIP-VVADR-CLMVEH 130 (140)
T ss_dssp CSCHHHHTTTHHHHHHHCCSCEEECTTCCC---HHHHHHHHHTTCC-EEESC-CHHHHH
T ss_pred EeCHHHHHHHHHHHHHcCCCEEEEcCCcCH---HHHHHHHHHcCCE-EEcCC-ccceEC
Confidence 999999999999999999988887887653 5688889999988 45677 888653
No 83
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=98.70 E-value=2.2e-08 Score=94.62 Aligned_cols=116 Identities=13% Similarity=0.082 Sum_probs=96.6
Q ss_pred ceEEEEcCCchHHHHHHHHH---HhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAV---TKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i---~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
-|++|.+- |.+|+..+|.. ...+++++||++|++..|+|++++.|. +.++|++.|++++++ .++|++|.
T Consensus 8 ~~~vi~~~-g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~--~~gipi~~~l~~al~-----~~~d~lvi 79 (349)
T 2obn_A 8 QRVAILLH-EGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGI--YRYVPIVKSVEAALE-----YKPQVLVI 79 (349)
T ss_dssp CCEEEECT-TTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCC--CSCCCEESSHHHHGG-----GCCSEEEE
T ss_pred CcEEEEeC-CCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCC--cCCCCccCCHHHHHh-----CCCCEEEE
Confidence 57999985 99998888877 777889999999999999999999996 689999999999996 58999998
Q ss_pred cC------CchhHHHHHHHHHHcCCCEEEeCCC-CCHHHHHHHHHHhhhCCCeEEEc
Q 022250 113 FT------DASTVYDNVKQATAFGMRSVVYVPH-IQLETVSALSAFCDKASMGCLIA 162 (300)
Q Consensus 113 fT------~p~~~~~~~~~al~~G~~vVigTTG-~~~e~~~~L~~~a~~~~i~iv~a 162 (300)
-+ .|+...+.+..|+++|++||.|--. +++ ..+|.++|++ |+.++=.
T Consensus 80 g~a~~gG~l~~~~~~~i~~Al~~G~~Vvsglh~~l~~--~pel~~~A~~-g~~i~dv 133 (349)
T 2obn_A 80 GIAPKGGGIPDDYWIELKTALQAGMSLVNGLHTPLAN--IPDLNALLQP-GQLIWDV 133 (349)
T ss_dssp CCCCCCC-SCGGGHHHHHHHHHTTCEEEECSSSCCTT--CHHHHHHCCT-TCCEEET
T ss_pred EecCCCCCCCHHHHHHHHHHHHcCCcEEeCccchhhC--CHHHHHHHHc-CCEEEEe
Confidence 75 3677789999999999999998763 332 2348888988 7766643
No 84
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.69 E-value=5.8e-08 Score=93.36 Aligned_cols=147 Identities=9% Similarity=0.115 Sum_probs=96.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhc-CcC----CC-----CcceecCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCD-MEQ----PL-----EIPVMSDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~~~~~g-~~~----~~-----gv~v~~dl~~~l~~~~~ 103 (300)
|+||+|+|+ |.+|+.+++.+.+.++. ..+.+++++. ..+..++. +.. .. ++.-.++++++++.
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~--~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~--- 74 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTL--SKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE--- 74 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCH--HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCH--HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh---
Confidence 579999999 99999999999987765 4455667542 11111110 000 00 11112456677751
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCC--------CHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI--------QLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~--------~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~ 175 (300)
.++|+||.++.|....+.+..|+++|+++|. ++++ .-.+..++.+.++++|+.++..++|..|...+ +
T Consensus 75 -~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l--~ 150 (405)
T 4ina_A 75 -VKPQIVLNIALPYQDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNV--F 150 (405)
T ss_dssp -HCCSEEEECSCGGGHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHH--H
T ss_pred -hCCCEEEECCCcccChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHH--H
Confidence 2489999999998889999999999999985 3332 12233578888999999999999999997533 2
Q ss_pred HHHhcc-CCCCeEEEEc
Q 022250 176 AISASF-HYKNVEIVES 191 (300)
Q Consensus 176 a~~~~~-~~~dieIiE~ 191 (300)
+..+++ .+.+++.++.
T Consensus 151 a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 151 CAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp HHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhccCcccEEEE
Confidence 222222 2445555554
No 85
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=98.66 E-value=3.8e-08 Score=94.23 Aligned_cols=121 Identities=9% Similarity=0.032 Sum_probs=82.0
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCC-cEEEEE-EecCCCCcchhhhh---cCc-----------------CCCCcce
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGA-IDSHSVGEDIGMVC---DME-----------------QPLEIPV 90 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~-vd~~~~g~d~~~~~---g~~-----------------~~~gv~v 90 (300)
++|+||+|+|+||.||+.+++.+.+.|+ ++++++ .+++. ..+.+.+ +.. ...++.+
T Consensus 2 ~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni--~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v 79 (388)
T 1r0k_A 2 SQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNV--KDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEA 79 (388)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCH--HHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEE
T ss_pred CCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCH--HHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEE
Confidence 3469999999999999999999999887 999987 43321 0000000 000 0011222
Q ss_pred ---ecCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE
Q 022250 91 ---MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (300)
Q Consensus 91 ---~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv 160 (300)
.++++++++ .. +|+||+.+.-.+..+....|+++||+|++..-......-+.|.++|+++|+.++
T Consensus 80 ~~g~~~~~el~~----~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~li 147 (388)
T 1r0k_A 80 AAGADALVEAAM----MG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLL 147 (388)
T ss_dssp EESHHHHHHHHT----SC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEE
T ss_pred EeCccHHHHHHc----CC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEE
Confidence 133445554 34 899999997777889999999999999997433323345678889999887764
No 86
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.65 E-value=6.5e-08 Score=91.95 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=94.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC-----cceecCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-----IPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g-----v~v~~dl~~~l~~~~~~~~~DV 109 (300)
..||+|+|+ |+||+.+++.+.+. .++ .++|++. ..+..++ ...+ +.-.++++++++ ++|+
T Consensus 16 ~~~v~IiGa-G~iG~~ia~~L~~~--~~V-~V~~R~~--~~a~~la---~~~~~~~~d~~~~~~l~~ll~------~~Dv 80 (365)
T 2z2v_A 16 HMKVLILGA-GNIGRAIAWDLKDE--FDV-YIGDVNN--ENLEKVK---EFATPLKVDASNFDKLVEVMK------EFEL 80 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT--SEE-EEEESCH--HHHHHHT---TTSEEEECCTTCHHHHHHHHT------TCSC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHcC--CeE-EEEECCH--HHHHHHH---hhCCeEEEecCCHHHHHHHHh------CCCE
Confidence 478999998 99999999998765 664 5677653 2233333 1122 111245667773 7899
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHH-HH-HHHHHHhccCCCCeE
Q 022250 110 VIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI-LL-QQAAISASFHYKNVE 187 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~-ll-~~~a~~~~~~~~die 187 (300)
||.++++..+.+.++.|+++|+++|.-++ . .++..+|.+.|+++|+.++....|..|+. ++ .++++.+ |++
T Consensus 81 VIn~~P~~~~~~v~~a~l~~G~~~vD~s~-~-~~~~~~l~~~Ak~aG~~~l~g~G~dPG~~~~~a~~~~~~~-----~v~ 153 (365)
T 2z2v_A 81 VIGALPGFLGFKSIKAAIKSKVDMVDVSF-M-PENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL-----DLK 153 (365)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCEEECCC-C-SSCGGGGHHHHHHTTCEEECSCBTTTBHHHHHHHHHHHHS-----CEE
T ss_pred EEECCChhhhHHHHHHHHHhCCeEEEccC-C-cHHHHHHHHHHHHcCCEEEECCCCcchHHHHHHHHHHHhc-----CCC
Confidence 99998888888899999999999997443 2 33446788889999999999999999975 22 3444432 266
Q ss_pred EEEc
Q 022250 188 IVES 191 (300)
Q Consensus 188 IiE~ 191 (300)
-++.
T Consensus 154 ~i~~ 157 (365)
T 2z2v_A 154 EGYI 157 (365)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 87
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.63 E-value=1.6e-07 Score=88.77 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=70.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCcC-------CCCcceec-CHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQ-------PLEIPVMS-DLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~~~~~g~~~-------~~gv~v~~-dl~~~l~~~~~~ 104 (300)
+|+||+|+|++|++|+.+++.+.++|++||+++.+ ....|+...+..+... ...+.+.+ +.++ +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~------ 75 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-H------ 75 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-G------
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-h------
Confidence 46999999999999999999999999999999884 3334444432221100 00122221 3332 3
Q ss_pred CCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCC
Q 022250 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG 139 (300)
.++|+|+.++....+.+.+..++++|++||.-+..
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred cCCCEEEECCChHHHHHHHHHHHHCCCEEEECCcc
Confidence 37899998888888999999999999998876644
No 88
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.62 E-value=1.3e-07 Score=89.33 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=71.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCC-CCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~-~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|++|++|+.+++.+.++|++||+++.+....|+...+..+.-.. ..+.+ .++++ + .++|+|+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~------~~vDvV~~a 75 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-L------EPADILVLA 75 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-C------CCCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccc-cchhH-h------cCCCEEEEc
Confidence 689999999999999999999999999999988865555554432211000 11222 23432 3 379999988
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
+....+.+.+..++++|+.+|.-+..|
T Consensus 76 ~g~~~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHGVFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp CCTTHHHHTHHHHHTTCSEEEECSSTT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEcCccc
Confidence 888888999999999999988655533
No 89
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.61 E-value=1.4e-07 Score=89.24 Aligned_cols=99 Identities=16% Similarity=0.098 Sum_probs=70.3
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCcCC-------CCccee-cCHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQP-------LEIPVM-SDLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~~~~~g~~~~-------~gv~v~-~dl~~~l~~~~~~ 104 (300)
||+||+|+|++|++|+.+++.+.++|+++|+++.+ +...|+...+..+...+ ..+.+. .|++++++
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 81 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF----- 81 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-----
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-----
Confidence 56899999999999999999999899999999885 33445554433221000 011121 24444432
Q ss_pred CCccEEEEcCCchhHHHHHHHHHHcCCCEEEeC
Q 022250 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigT 137 (300)
.++|+|+.++....+.+.+..++++|+.||.-+
T Consensus 82 ~~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 82 EDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 278999988888889999999999999977544
No 90
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=98.61 E-value=9.1e-08 Score=77.46 Aligned_cols=110 Identities=13% Similarity=0.163 Sum_probs=87.9
Q ss_pred ceEEEEcCC---chHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
-+|+|+|++ ++.|..+.+.+.+. ++++.. +++.. .+ -.|.+.|.+++++- . +|+++.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~-g~~V~p-VnP~~-----~~------i~G~~~y~sl~dlp------~-vDlavi 64 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSH-GHEFIP-VGRKK-----GE------VLGKTIINERPVIE------G-VDTVTL 64 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHH-TCCEEE-ESSSC-----SE------ETTEECBCSCCCCT------T-CCEEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHC-CCeEEE-ECCCC-----Cc------CCCeeccCChHHCC------C-CCEEEE
Confidence 569999997 67999999998764 677665 44331 22 24678898888773 5 999999
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~l 171 (300)
|++|+.+.+.++.|.+.|+..|+-++|+.. +++.++|+++|+.++ +| ++|+.+
T Consensus 65 ~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~---~e~~~~a~~~Girvv--~n-C~gv~l 117 (122)
T 3ff4_A 65 YINPQNQLSEYNYILSLKPKRVIFNPGTEN---EELEEILSENGIEPV--IG-CTLVML 117 (122)
T ss_dssp CSCHHHHGGGHHHHHHHCCSEEEECTTCCC---HHHHHHHHHTTCEEE--ES-CHHHHH
T ss_pred EeCHHHHHHHHHHHHhcCCCEEEECCCCCh---HHHHHHHHHcCCeEE--CC-cCeEEe
Confidence 999999999999999999999998899854 468888999999977 46 888754
No 91
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.61 E-value=8.6e-08 Score=84.63 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=70.4
Q ss_pred cceEEEEcCCchHHHHHHHHH-HhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAV-TKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i-~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVI 111 (300)
..||+|+|+ |++|+.+++.+ ... +++++|++|.++ ...+..+ .++++ +++++++++ + ++|+||
T Consensus 80 ~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~dp--~k~g~~i-----~gv~V~~~~dl~ell~----~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDP--EKVGRPV-----RGGVIEHVDLLPQRVP----G-RIEIAL 145 (211)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCT--TTTTCEE-----TTEEEEEGGGHHHHST----T-TCCEEE
T ss_pred CCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeCCH--HHHhhhh-----cCCeeecHHhHHHHHH----c-CCCEEE
Confidence 489999998 99999999963 334 899999999653 1122211 23444 678888885 4 799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEE-EeCC-CCC
Q 022250 112 DFTDASTVYDNVKQATAFGMRSV-VYVP-HIQ 141 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vV-igTT-G~~ 141 (300)
.+++...+.+.+..++++|++.| ..|| .++
T Consensus 146 IA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~l~ 177 (211)
T 2dt5_A 146 LTVPREAAQKAADLLVAAGIKGILNFAPVVLE 177 (211)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred EeCCchhHHHHHHHHHHcCCCEEEECCccccc
Confidence 88888888999999999999955 5576 454
No 92
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=98.56 E-value=1.2e-07 Score=89.42 Aligned_cols=100 Identities=18% Similarity=0.235 Sum_probs=69.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhh------hcCcC--------C--C-----Cccee
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMV------CDMEQ--------P--L-----EIPVM 91 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d~~~~------~g~~~--------~--~-----gv~v~ 91 (300)
||+||+|+|+ |+||+.+++++.++|++||+++.|+ ... ...+.+ .|.-. . . .++++
T Consensus 2 m~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~-~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITT-DYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCH-HHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCH-HHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 4589999999 9999999999999999999999884 110 000111 01000 0 0 12234
Q ss_pred c--CHHHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCCC
Q 022250 92 S--DLTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (300)
Q Consensus 92 ~--dl~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTTG 139 (300)
. |++++ .. +.++|+|+++|....+.+.+..++++|++ +||..++
T Consensus 80 ~~~dp~~l~w~----~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 80 GIRNPDEIPWA----EAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CCSCGGGCCHH----HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred ecCChHHcccc----ccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCC
Confidence 2 66654 11 13789999999999999999999999985 7777653
No 93
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.52 E-value=1e-07 Score=89.98 Aligned_cols=97 Identities=20% Similarity=0.250 Sum_probs=66.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--------cC---c------CCCCcceecCHHH
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--------DM---E------QPLEIPVMSDLTM 96 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--------g~---~------~~~gv~v~~dl~~ 96 (300)
||+||+|+|+ |++|+.+++++.++++++|+++.|... .....++ |. . ...++.+..+.++
T Consensus 1 MmikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~--~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 1 MPAKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKP--DFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSC--SHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred CceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCH--HHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHH
Confidence 5789999999 999999999999889999999988431 1100000 00 0 0012223334444
Q ss_pred HHhcccccCCccEEEEcCCchhHHHHHH-HHHHcCCCEEEeCCC
Q 022250 97 VLGSISQSKARAVVIDFTDASTVYDNVK-QATAFGMRSVVYVPH 139 (300)
Q Consensus 97 ~l~~~~~~~~~DVVIDfT~p~~~~~~~~-~al~~G~~vVigTTG 139 (300)
++ .++|+|+++|....+.+.+. .++++|++||+..+.
T Consensus 78 ~~------~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 78 II------EDADIVVDGAPKKIGKQNLENIYKPHKVKAILQGGE 115 (343)
T ss_dssp TG------GGCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTTS
T ss_pred hc------cCCCEEEECCCccccHHHHHHHHHHCCCEEEECCCc
Confidence 44 37899998887787788996 999999998875543
No 94
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.51 E-value=2.4e-07 Score=82.07 Aligned_cols=93 Identities=23% Similarity=0.334 Sum_probs=65.1
Q ss_pred cceEEEEcCCchHHHHHHHH-HHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIA-VTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~-i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVI 111 (300)
..||+|+|+ |++|+.+++. ....++++++|++|.++ ..++..+ .++++ +++++++++ .. |++|
T Consensus 85 ~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp--~k~g~~i-----~gv~V~~~~dl~eli~-----~~-D~Vi 150 (215)
T 2vt3_A 85 MTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINE--SKIGTEV-----GGVPVYNLDDLEQHVK-----DE-SVAI 150 (215)
T ss_dssp --CEEEECC-SHHHHHHHHCC------CCEEEEEESCT--TTTTCEE-----TTEEEEEGGGHHHHCS-----SC-CEEE
T ss_pred CCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCH--HHHHhHh-----cCCeeechhhHHHHHH-----hC-CEEE
Confidence 478999998 9999999995 34467899999999653 1222211 23443 578889885 34 9999
Q ss_pred EcCCchhHHHHHHHHHHcCCC-EEEeCC-CCC
Q 022250 112 DFTDASTVYDNVKQATAFGMR-SVVYVP-HIQ 141 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~-vVigTT-G~~ 141 (300)
.+++...+.+.+..++++|++ ++..|| -++
T Consensus 151 IAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~l~ 182 (215)
T 2vt3_A 151 LTVPAVAAQSITDRLVALGIKGILNFTPARLN 182 (215)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCEEEECSSCCCC
T ss_pred EecCchhHHHHHHHHHHcCCCEEEEcCceecc
Confidence 888888889999999999999 666776 344
No 95
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=98.48 E-value=1.9e-07 Score=87.90 Aligned_cols=100 Identities=19% Similarity=0.257 Sum_probs=66.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-CCCCcch---------hhhhcCc---------CCCCccee--c
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDI---------GMVCDME---------QPLEIPVM--S 92 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d~---------~~~~g~~---------~~~gv~v~--~ 92 (300)
||+||+|+|+ |++|+.+++.+.++|++||+++.|+ ...+.-+ +.+.|.. ....++++ .
T Consensus 2 M~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~ 80 (335)
T 1u8f_O 2 GKVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER 80 (335)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecC
Confidence 5689999998 9999999999999999999999884 2111000 0000000 00012233 3
Q ss_pred CHHHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcC-CCEEEeCC
Q 022250 93 DLTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFG-MRSVVYVP 138 (300)
Q Consensus 93 dl~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G-~~vVigTT 138 (300)
|++++ .. +.++|+|+++|....+.+.+..++++| +.|++..+
T Consensus 81 d~~~l~~~----~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 81 DPSKIKWG----DAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp SGGGCCTT----TTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CHHHCccc----cCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 56655 21 147899999999999999999999999 55555543
No 96
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.47 E-value=2.7e-07 Score=87.55 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=69.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcC-C--CCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-P--LEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~-~--~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
++||+|+|++|++|+.+++.+.++|+++|+++.+....|+...+..+.-. . ..+.+ .+ ++.+ .++|+|+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~------~~vDvVf 87 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVS-VK-DADF------STVDAVF 87 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBC-GG-GCCG------GGCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCccccccee-cc-hhHh------cCCCEEE
Confidence 48999999999999999999999999999998886555554443221100 0 11112 12 3333 3689999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
.++....+.+.+..+ ++|+.+|.-+..|
T Consensus 88 ~atp~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp ECCCTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred EcCCchhHHHHHHHH-hCCCEEEECCccc
Confidence 888888899999999 9999877655544
No 97
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=98.46 E-value=8.7e-07 Score=83.47 Aligned_cols=100 Identities=19% Similarity=0.153 Sum_probs=75.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhc-CcCCCCcceec--CHHHHHhcccccCCcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCD-MEQPLEIPVMS--DLTMVLGSISQSKARA 108 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~~~~~g-~~~~~gv~v~~--dl~~~l~~~~~~~~~D 108 (300)
|+||+|+|+||.+|+.+++.+.++|+++|+.+..+. ..|+...+... ........+.+ +.++++ .++|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~------~~~D 77 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFS------PGVD 77 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTC------TTCS
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHh------cCCC
Confidence 699999999999999999999999999999998876 67776654321 00111333333 444443 3789
Q ss_pred EEEEcCCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 109 VVIDfT~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
+|+.+++.....+.+..++++|+.+|.-+..|
T Consensus 78 vvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 78 VVFLATAHEVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEEEEcCCcc
Confidence 99977777777999999999999999776654
No 98
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.39 E-value=5.2e-07 Score=80.61 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=67.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+||||+|+|+ |+||+.+++.+.+. +.+ |.++|++. ..+..+. ..+|+.+++|++++++ ++|+||.+
T Consensus 2 ~~m~i~iiG~-G~mG~~~a~~l~~~-g~~-v~~~~~~~--~~~~~~~---~~~g~~~~~~~~~~~~------~~D~Vi~~ 67 (259)
T 2ahr_A 2 NAMKIGIIGV-GKMASAIIKGLKQT-PHE-LIISGSSL--ERSKEIA---EQLALPYAMSHQDLID------QVDLVILG 67 (259)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTS-SCE-EEEECSSH--HHHHHHH---HHHTCCBCSSHHHHHH------TCSEEEEC
T ss_pred CccEEEEECC-CHHHHHHHHHHHhC-CCe-EEEECCCH--HHHHHHH---HHcCCEeeCCHHHHHh------cCCEEEEE
Confidence 4579999997 99999999988754 454 56777642 2222222 1235667889999884 78999999
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHHHHHH
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSA 147 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e~~~~ 147 (300)
++|..+.+.+... +.|+ +|+.++ |.+.+++++
T Consensus 68 v~~~~~~~v~~~l-~~~~-~vv~~~~~~~~~~l~~ 100 (259)
T 2ahr_A 68 IKPQLFETVLKPL-HFKQ-PIISMAAGISLQRLAT 100 (259)
T ss_dssp SCGGGHHHHHTTS-CCCS-CEEECCTTCCHHHHHH
T ss_pred eCcHhHHHHHHHh-ccCC-EEEEeCCCCCHHHHHH
Confidence 9888777766543 4666 555554 788765433
No 99
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.36 E-value=1.5e-06 Score=80.37 Aligned_cols=129 Identities=17% Similarity=0.135 Sum_probs=71.1
Q ss_pred cccCcccccccceeeEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhcCcCCCCcc
Q 022250 11 RMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIP 89 (300)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~~~~~g~~~~~gv~ 89 (300)
|.||-++-.+-++.-.+..+ .|+||+|+|+ |.||+.+++.+.+. ++ ++. ++|++........+ .+.|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~---~~~~I~iIG~-G~mG~~~A~~L~~~-G~~~V~-~~dr~~~~~~~~~~----~~~g~~ 72 (312)
T 3qsg_A 3 HHHHHSSGVDLGTENLYFQS---NAMKLGFIGF-GEAASAIASGLRQA-GAIDMA-AYDAASAESWRPRA----EELGVS 72 (312)
T ss_dssp -------------------------CEEEEECC-SHHHHHHHHHHHHH-SCCEEE-EECSSCHHHHHHHH----HHTTCE
T ss_pred cccccccccccCcccccccC---CCCEEEEECc-cHHHHHHHHHHHHC-CCCeEE-EEcCCCCHHHHHHH----HHCCCE
Confidence 45666666666666555432 2589999997 99999999998764 66 554 57764100111112 235677
Q ss_pred eecCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHHhhhC
Q 022250 90 VMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKA 155 (300)
Q Consensus 90 v~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~--G~~vVigTTG~~~e~~~~L~~~a~~~ 155 (300)
.+++++++++ ++|+||.+.++....+.+....+. .-.+|+-++...+....++.+..++.
T Consensus 73 ~~~~~~e~~~------~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 73 CKASVAEVAG------ECDVIFSLVTAQAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp ECSCHHHHHH------HCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHh------cCCEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 7889999885 689999888887777766555443 22366655555566656666665554
No 100
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.35 E-value=4.1e-06 Score=64.76 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=70.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee-------cCHHHHHhcccccCC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-------SDLTMVLGSISQSKA 106 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~-------~dl~~~l~~~~~~~~ 106 (300)
|++||+|+|+ |.||+.+++.+.+....+++. ++++. .....+. ..++... +++++++ .+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~-~~r~~--~~~~~~~----~~~~~~~~~d~~~~~~~~~~~------~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTV-ADHDL--AALAVLN----RMGVATKQVDAKDEAGLAKAL------GG 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEE-EESCH--HHHHHHH----TTTCEEEECCTTCHHHHHHHT------TT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEE-EeCCH--HHHHHHH----hCCCcEEEecCCCHHHHHHHH------cC
Confidence 4689999999 999999999988654377654 55432 1112221 1222211 2344444 47
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhh
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~ 154 (300)
+|+||+++.+......+..|.+.|++.+.-++ +.+..+.+.+++++
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~ 115 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE--DVAATNAVRALVED 115 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEECCCS--CHHHHHHHHHHHHC
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCEEEecC--cHHHHHHHHHHHHh
Confidence 89999999888889999999999999886443 23345566666654
No 101
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.34 E-value=6e-07 Score=78.85 Aligned_cols=129 Identities=19% Similarity=0.045 Sum_probs=75.6
Q ss_pred eeEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccc
Q 022250 24 FISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQ 103 (300)
Q Consensus 24 ~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~ 103 (300)
+-.|.....++|+||+|+|+ |+||+.+++.+.+ .+++++.++|++. ..+..+. ..+++..+.+..+.+
T Consensus 12 ~~~~~~~~~m~mmkI~IIG~-G~mG~~la~~l~~-~g~~V~~v~~r~~--~~~~~l~---~~~g~~~~~~~~~~~----- 79 (220)
T 4huj_A 12 DLGTENLYFQSMTTYAIIGA-GAIGSALAERFTA-AQIPAIIANSRGP--ASLSSVT---DRFGASVKAVELKDA----- 79 (220)
T ss_dssp -----CTTGGGSCCEEEEEC-HHHHHHHHHHHHH-TTCCEEEECTTCG--GGGHHHH---HHHTTTEEECCHHHH-----
T ss_pred cccccchhhhcCCEEEEECC-CHHHHHHHHHHHh-CCCEEEEEECCCH--HHHHHHH---HHhCCCcccChHHHH-----
Confidence 34455555555789999997 9999999999875 4778877677653 2222222 123444444444555
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHH-cCCCEEEeCCCCC-----HH------HHHHHHHHhhhCCCeEEEc-CCCcH
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATA-FGMRSVVYVPHIQ-----LE------TVSALSAFCDKASMGCLIA-PTLSI 167 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~-~G~~vVigTTG~~-----~e------~~~~L~~~a~~~~i~iv~a-~N~Si 167 (300)
.++|+||.+++|..+.+.+..... .++.+|.-+.|+. .+ ..+.|.+.... .+++.+ ||+..
T Consensus 80 -~~aDvVilavp~~~~~~v~~~l~~~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~ 153 (220)
T 4huj_A 80 -LQADVVILAVPYDSIADIVTQVSDWGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPG--AKVVKAFNTLPA 153 (220)
T ss_dssp -TTSSEEEEESCGGGHHHHHTTCSCCTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTT--CEEEEESCSSCH
T ss_pred -hcCCEEEEeCChHHHHHHHHHhhccCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCC--CCEEECCCCCCH
Confidence 478999999988888777754321 2444444444662 00 33456555543 456655 44443
No 102
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.33 E-value=7.2e-07 Score=79.99 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=70.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
+|||+|+|+ |+||+.+++.+.+. +++++.++|++. ..+..+. ..+++.+++++++++ .++|+||.++
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~-g~~~v~~~~~~~--~~~~~~~---~~~g~~~~~~~~~~~------~~~Dvvi~av 76 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRK-GFRIVQVYSRTE--ESARELA---QKVEAEYTTDLAEVN------PYAKLYIVSL 76 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSH--HHHHHHH---HHTTCEEESCGGGSC------SCCSEEEECC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHC-CCeEEEEEeCCH--HHHHHHH---HHcCCceeCCHHHHh------cCCCEEEEec
Confidence 479999998 99999999988764 677788888653 2222222 234667788888877 3789999999
Q ss_pred CchhHHHHHHHHHH---cCCCEEEeCCCCCHHH
Q 022250 115 DASTVYDNVKQATA---FGMRSVVYVPHIQLET 144 (300)
Q Consensus 115 ~p~~~~~~~~~al~---~G~~vVigTTG~~~e~ 144 (300)
++..+.+.+....+ .+..+|..++|++.+.
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH
Confidence 98877777665544 4666666677887544
No 103
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.30 E-value=2.9e-06 Score=83.12 Aligned_cols=130 Identities=16% Similarity=0.097 Sum_probs=88.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-------ecCHHHHHhcccccCCc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKAR 107 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~~ 107 (300)
+.||+|+|+ |.+|+.+++.+.+.+++++ .+++++. ..+..++. ..++.. .+++.++++ ++
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V-~v~~R~~--~ka~~la~---~~~~~~~~~D~~d~~~l~~~l~------~~ 89 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINV-TVACRTL--ANAQALAK---PSGSKAISLDVTDDSALDKVLA------DN 89 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEE-EEEESSH--HHHHHHHG---GGTCEEEECCTTCHHHHHHHHH------TS
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeE-EEEECCH--HHHHHHHH---hcCCcEEEEecCCHHHHHHHHc------CC
Confidence 468999998 9999999999987767874 4566542 22222321 112211 124455553 78
Q ss_pred cEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHH--HHHHHHHHh
Q 022250 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI--LLQQAAISA 179 (300)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~--ll~~~a~~~ 179 (300)
|+||..+++.........|++.|++++.- ..+++ ....|.+.|+++|+.++-...|..|+. +..+++.++
T Consensus 90 DvVIn~tp~~~~~~v~~a~l~~g~~vvd~-~~~~p-~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~ 161 (467)
T 2axq_A 90 DVVISLIPYTFHPNVVKSAIRTKTDVVTS-SYISP-ALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEV 161 (467)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHTCEEEEC-SCCCH-HHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred CEEEECCchhhhHHHHHHHHhcCCEEEEe-ecCCH-HHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHH
Confidence 99999988776777788999999999853 33444 346778888888999888888877764 234455454
No 104
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.28 E-value=3.3e-06 Score=76.45 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=71.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+||||+|+|+ |.||+.+++.+.+ .++++. ++| +. ..+..+. +.|+.++++++++++ ++|+||.+
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~-~g~~V~-~~~-~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~ 65 (295)
T 1yb4_A 2 NAMKLGFIGL-GIMGSPMAINLAR-AGHQLH-VTT-IG--PVADELL----SLGAVNVETARQVTE------FADIIFIM 65 (295)
T ss_dssp --CEEEECCC-STTHHHHHHHHHH-TTCEEE-ECC-SS--CCCHHHH----TTTCBCCSSHHHHHH------TCSEEEEC
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHh-CCCEEE-EEc-CH--HHHHHHH----HcCCcccCCHHHHHh------cCCEEEEE
Confidence 3579999998 9999999998875 478875 556 43 2222332 236667788999884 78999987
Q ss_pred CCchhH-HHHHH------HHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 114 TDASTV-YDNVK------QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 114 T~p~~~-~~~~~------~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
++.... .+.+. ..+..|..+|.-+++ ++...++|.+...+.++.++-+|
T Consensus 66 vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~g~~~~~~p 121 (295)
T 1yb4_A 66 VPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRVNEMGADYLDAP 121 (295)
T ss_dssp CSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCHHHHHHHHhCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHcCCeEEEcc
Confidence 755543 33333 123445556555555 44455667777766666655444
No 105
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=98.28 E-value=1.7e-06 Score=84.70 Aligned_cols=131 Identities=11% Similarity=0.104 Sum_probs=88.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEE--EEecCCCCcchhhhhcCcCCCCccee-cCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAG--AIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg--~vd~~~~g~d~~~~~g~~~~~gv~v~-~dl~~~l~~~~~~~~~DVVI 111 (300)
++||.|+|+ |.||+.++..+.++++++++. ++|+...+.++.+..|. ....+.+. +|++++++++.+ +.|+||
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~-~~~~~~Vdadnv~~~l~aLl~--~~DvVI 88 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGV-SFKLQQITPQNYLEVIGSTLE--ENDFLI 88 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTC-EEEECCCCTTTHHHHTGGGCC--TTCEEE
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCC-ceeEEeccchhHHHHHHHHhc--CCCEEE
Confidence 478999998 999999999999888874322 34665555565554443 12223333 345454433222 249999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeCCC-CC---H------------HHHHHHHHHh-hhCCCeEEEcCCCcHHHH
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYVPH-IQ---L------------ETVSALSAFC-DKASMGCLIAPTLSIGSI 170 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigTTG-~~---~------------e~~~~L~~~a-~~~~i~iv~a~N~SiGv~ 170 (300)
+.+.|....+.++.|+++|++.+--+-. |+ . +....+.+.+ +++| ..+...-|..|+.
T Consensus 89 N~s~~~~~l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G-tAilg~G~nPGvv 163 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK-TALITHGANPGLV 163 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS-CEECSCBTTTBHH
T ss_pred ECCccccCHHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC-cEEecCCCCccHH
Confidence 9999999999999999999999965421 11 1 2223455655 4366 7788899999976
No 106
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=98.27 E-value=2.4e-06 Score=81.02 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCC-------CCcceec-CHHHHHhcccc
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP-------LEIPVMS-DLTMVLGSISQ 103 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~-------~gv~v~~-dl~~~l~~~~~ 103 (300)
|++++||+|+|+||-.|+.+++.+.++|.+||+.+..+...|+...+...+... ....+.+ +.++ +
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~----- 77 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M----- 77 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C-----
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h-----
Confidence 345799999999999999999999999999999998777777776653210000 0122221 2222 2
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
.++|+|+.++......+.+..+++.|+.+|.=+.
T Consensus 78 -~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa 111 (359)
T 4dpl_A 78 -DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSP 111 (359)
T ss_dssp -TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSS
T ss_pred -cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCC
Confidence 3789999888888889999999999999887553
No 107
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=98.27 E-value=2.4e-06 Score=81.02 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=72.6
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCC-------CCcceec-CHHHHHhcccc
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP-------LEIPVMS-DLTMVLGSISQ 103 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~-------~gv~v~~-dl~~~l~~~~~ 103 (300)
|++++||+|+|+||-.|+.+++.+.++|.+||+.+..+...|+...+...+... ....+.+ +.++ +
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~----- 77 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M----- 77 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C-----
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h-----
Confidence 345799999999999999999999999999999998777777776653210000 0122221 2222 2
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
.++|+|+.++......+.+..+++.|+.+|.=+.
T Consensus 78 -~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa 111 (359)
T 4dpk_A 78 -DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSP 111 (359)
T ss_dssp -TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSS
T ss_pred -cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCC
Confidence 3789999888888889999999999999887553
No 108
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.25 E-value=6.5e-06 Score=74.84 Aligned_cols=117 Identities=18% Similarity=0.197 Sum_probs=75.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.+++.+.+ .+++++ ++|++. .....+. +.|+.++++++++++ ++|+||.++
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLK-EGVTVY-AFDLME--ANVAAVV----AQGAQACENNQKVAA------ASDIIFTSL 68 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----TTTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEECc-cHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCeecCCHHHHHh------CCCEEEEEC
Confidence 589999998 9999999998875 477865 577542 2222222 236777889998884 689999887
Q ss_pred Cchh-HHHHHH------HHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHH
Q 022250 115 DAST-VYDNVK------QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 168 (300)
Q Consensus 115 ~p~~-~~~~~~------~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiG 168 (300)
+... +.+.+. ..+..|..+|..+++. ++..++|.+...+.++.++-+| .+.|
T Consensus 69 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~-~~~~~~l~~~~~~~g~~~~~~p-~~~~ 127 (301)
T 3cky_A 69 PNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS-PSSTLKMAKVAAEKGIDYVDAP-VSGG 127 (301)
T ss_dssp SSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC-HHHHHHHHHHHHHTTCEEEECC-EESH
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCCeEEEcc-CCCC
Confidence 5433 344432 2345577666656666 3445567776666666666554 3444
No 109
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.25 E-value=4.1e-06 Score=76.96 Aligned_cols=134 Identities=16% Similarity=0.065 Sum_probs=74.9
Q ss_pred ccccccceeeEeecCCCCC---cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceec
Q 022250 16 SQNVKAKRFISCSTNPPQS---NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS 92 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~---~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~ 92 (300)
+..+.-+-...|-.++..| ++||+|+|+ |.||+.+++.+.+ .++++ .++|++. ..+..+. +.|+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~-G~mG~~~a~~l~~-~g~~V-~~~~~~~--~~~~~~~----~~g~~~~~ 78 (316)
T 2uyy_A 8 SSGVDLGTENLYFQSMGSITPTDKKIGFLGL-GLMGSGIVSNLLK-MGHTV-TVWNRTA--EKCDLFI----QEGARLGR 78 (316)
T ss_dssp -----------------CCCCCSSCEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSG--GGGHHHH----HTTCEECS
T ss_pred ccccCccccceeecCCCCCCCCCCeEEEEcc-cHHHHHHHHHHHh-CCCEE-EEEeCCH--HHHHHHH----HcCCEEcC
Confidence 3334334444444443322 389999998 9999999998875 46775 4567543 2222222 24566778
Q ss_pred CHHHHHhcccccCCccEEEEcCC-chhHHHHHHH------HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 93 DLTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 93 dl~~~l~~~~~~~~~DVVIDfT~-p~~~~~~~~~------al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
+++++++ ++|+||.+++ |....+.+.. .+..+..+|..++ .+.+..++|.+...+.++.++-+|.+
T Consensus 79 ~~~~~~~------~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~-~~~~~~~~l~~~~~~~~~~~v~~p~~ 151 (316)
T 2uyy_A 79 TPAEVVS------TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMST-VDADTVTELAQVIVSRGGRFLEAPVS 151 (316)
T ss_dssp CHHHHHH------HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CHHHHHh------cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEcCcc
Confidence 8888874 6899998877 5655555542 2334555554444 44555666777665556666655544
No 110
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.25 E-value=9e-07 Score=80.46 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=72.5
Q ss_pred eecCCCC-CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccC
Q 022250 27 CSTNPPQ-SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 27 ~~~~~~~-~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
|++++++ ||+||+|+|++|+||+.+++.+.+ .+++++ ++|++. .....+. +.|+.+. +.++++ .
T Consensus 2 ~~~~~~~~mmm~I~iIG~tG~mG~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~------~ 66 (286)
T 3c24_A 2 MVKDKNDVGPKTVAILGAGGKMGARITRKIHD-SAHHLA-AIEIAP--EGRDRLQ----GMGIPLT-DGDGWI------D 66 (286)
T ss_dssp ----CCSCCCCEEEEETTTSHHHHHHHHHHHH-SSSEEE-EECCSH--HHHHHHH----HTTCCCC-CSSGGG------G
T ss_pred CccccccccCCEEEEECCCCHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHH----hcCCCcC-CHHHHh------c
Confidence 3555553 568999999879999999998875 467876 577542 1122221 1344333 555665 3
Q ss_pred CccEEEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE-EcCCC
Q 022250 106 ARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCL-IAPTL 165 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv-~a~N~ 165 (300)
++|+||.+++|..+.+.+..... .+.-+|..+++.+.+. +.++ ..+..++ ..||+
T Consensus 67 ~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~---l~~~--~~~~~~v~~~P~~ 125 (286)
T 3c24_A 67 EADVVVLALPDNIIEKVAEDIVPRVRPGTIVLILDAAAPYAG---VMPE--RADITYFIGHPCH 125 (286)
T ss_dssp TCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEESCSHHHHHT---CSCC--CTTSEEEEEEECC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEECCCCchhHH---HHhh--hCCCeEEecCCCC
Confidence 78999999988887776665543 3454555566664333 2222 2346677 66776
No 111
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.25 E-value=2.3e-06 Score=75.57 Aligned_cols=92 Identities=20% Similarity=0.226 Sum_probs=69.6
Q ss_pred cceEEEEcCCchHHHHHHHHH-HhcCCcEEEEEEecCCCCc-chhh-hhcCcCCCCccee--cCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAV-TKARGMEVAGAIDSHSVGE-DIGM-VCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i-~~~~~~eLvg~vd~~~~g~-d~~~-~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DV 109 (300)
+.||+|+|| |++|+++++.+ .+..+++++|++|.++ . ..+. . -.|+|++ ++++++++ +.++|+
T Consensus 84 ~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp--~~kiG~~~-----i~GvpV~~~~dL~~~v~----~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDS--NDLVGKTT-----EDGIPVYGISTINDHLI----DSDIET 151 (212)
T ss_dssp CEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTT--STTTTCBC-----TTCCBEEEGGGHHHHC-----CCSCCE
T ss_pred CCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCc--hhccCcee-----ECCeEEeCHHHHHHHHH----HcCCCE
Confidence 579999999 99999999974 2456899999999653 1 1221 1 1356665 67888776 368999
Q ss_pred EEEcCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
+|.+++.....+.+..+.++|++-+.--|
T Consensus 152 vIIAvPs~~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 152 AILTVPSTEAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEEECS
T ss_pred EEEecCchhHHHHHHHHHHcCCCEEEEcC
Confidence 99888777778899999999999886643
No 112
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.24 E-value=2.8e-06 Score=83.02 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=84.3
Q ss_pred cceEEEEcCCc---hHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVK---EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~G---rMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
+-+|+|+|+++ ++|..+.+.+.+.....+ ..+++. + ++ -.|+++|.+++++. ..+|++|
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v-~pVnP~--~---~~------i~G~~~y~sl~~lp------~~~Dlav 69 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKV-YPVNIK--E---EE------VQGVKAYKSVKDIP------DEIDLAI 69 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEE-EEECSS--C---SE------ETTEECBSSTTSCS------SCCSEEE
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEE-EEECCC--C---Ce------ECCEeccCCHHHcC------CCCCEEE
Confidence 46799999973 789999999876543444 445543 1 11 25789999999885 4799999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEe-CCCCCH--H----HHHHHHHHhhhCCCeEEEcCC
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVY-VPHIQL--E----TVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVig-TTG~~~--e----~~~~L~~~a~~~~i~iv~a~N 164 (300)
.|++|+.+.+.++.|.+.|++.++- +.||.+ + ..+++.++++++|+.+ +.||
T Consensus 70 i~vp~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~v-iGPn 128 (457)
T 2csu_A 70 IVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRI-IGPN 128 (457)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEE-ECSS
T ss_pred EecCHHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEE-EcCC
Confidence 9999999999999999999997655 458853 1 2578899999988874 4555
No 113
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.24 E-value=5.8e-06 Score=75.08 Aligned_cols=114 Identities=17% Similarity=0.118 Sum_probs=72.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+|||+|+|+ |.||+.+++.+.+ .++++ .++|++. .....+. +.|+..+++++++++ ++|+||.+
T Consensus 4 M~m~i~iiG~-G~~G~~~a~~l~~-~g~~V-~~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~ 68 (299)
T 1vpd_A 4 MTMKVGFIGL-GIMGKPMSKNLLK-AGYSL-VVSDRNP--EAIADVI----AAGAETASTAKAIAE------QCDVIITM 68 (299)
T ss_dssp --CEEEEECC-STTHHHHHHHHHH-TTCEE-EEECSCH--HHHHHHH----HTTCEECSSHHHHHH------HCSEEEEC
T ss_pred ccceEEEECc-hHHHHHHHHHHHh-CCCEE-EEEeCCH--HHHHHHH----HCCCeecCCHHHHHh------CCCEEEEE
Confidence 5679999997 9999999998875 46775 4677542 1222222 236677889988884 68999988
Q ss_pred CC-chhHHHHH------HHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 114 TD-ASTVYDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 114 T~-p~~~~~~~------~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
++ |....+.+ ...+..|..+|.-+++. ....++|.+...+.++.++-+|
T Consensus 69 v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~g~~~~~~p 124 (299)
T 1vpd_A 69 LPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIA-PLASREISDALKAKGVEMLDAP 124 (299)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC-HHHHHHHHHHHHTTTCEEEECC
T ss_pred CCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCCeEEEec
Confidence 86 44444443 23445566665555555 4445567777666666655443
No 114
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=98.23 E-value=2.5e-06 Score=80.14 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=66.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHH-HHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM-VLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~-~l~~~~~~~~~DVVI 111 (300)
|+||+|+|++|++|+.+++.+.++ |++||+++.++...|+... +.+ ..+.+ .+++. .+ .++|+|+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~----~~i~~-~~~~~~~~------~~vDvVf 70 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNG----KTVRV-QNVEEFDW------SQVHIAL 70 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETT----EEEEE-EEGGGCCG------GGCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecC----ceeEE-ecCChHHh------cCCCEEE
Confidence 699999999999999999999888 8999999887554444322 111 12222 22221 22 3689999
Q ss_pred EcCCchhHHHHHHHHHHcCCCEEEeC
Q 022250 112 DFTDASTVYDNVKQATAFGMRSVVYV 137 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~G~~vVigT 137 (300)
+++......+.+..+++.|+.+|.-+
T Consensus 71 ~a~g~~~s~~~a~~~~~~G~~vId~s 96 (336)
T 2r00_A 71 FSAGGELSAKWAPIAAEAGVVVIDNT 96 (336)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred ECCCchHHHHHHHHHHHcCCEEEEcC
Confidence 88888889999999999999777644
No 115
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.22 E-value=1.1e-05 Score=74.67 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=77.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+++||+|+|+ |.||+.+++.+.+ .++++. ++|++. ..+..+. +.|+..+++++++++ ++|+||.+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~e~~~------~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCE-AGYALQ-VWNRTP--ARAASLA----ALGATIHEQARAAAR------DADIVVSM 94 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCEEESSHHHHHT------TCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCEeeCCHHHHHh------cCCEEEEE
Confidence 4689999998 9999999998875 478865 467643 2223332 347778899999984 78999977
Q ss_pred CCc-hhHHHHHH--H---HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 114 TDA-STVYDNVK--Q---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 114 T~p-~~~~~~~~--~---al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
.+. ..+.+.+. . .+..|..+|. ++..+++..+++.+..++.++..+-+|-+
T Consensus 95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~-~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 151 (320)
T 4dll_A 95 LENGAVVQDVLFAQGVAAAMKPGSLFLD-MASITPREARDHAARLGALGIAHLDTPVS 151 (320)
T ss_dssp CSSHHHHHHHHTTTCHHHHCCTTCEEEE-CSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CCCHHHHHHHHcchhHHhhCCCCCEEEe-cCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence 763 34444432 2 2344554544 44445566677777777777777766644
No 116
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.21 E-value=1.3e-05 Score=73.30 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=74.2
Q ss_pred EeecCCC-CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhccccc
Q 022250 26 SCSTNPP-QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS 104 (300)
Q Consensus 26 ~~~~~~~-~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~ 104 (300)
+|...++ .|++||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. +.|+..++|+++++
T Consensus 5 ~~~~~~~M~~~~~I~vIG~-G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~------ 69 (296)
T 3qha_A 5 MTTNAAHTTEQLKLGYIGL-GNMGAPMATRMTE-WPGGVT-VYDIRI--EAMTPLA----EAGATLADSVADVA------ 69 (296)
T ss_dssp ----------CCCEEEECC-STTHHHHHHHHTT-STTCEE-EECSST--TTSHHHH----HTTCEECSSHHHHT------
T ss_pred cCCCcccccCCCeEEEECc-CHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCEEcCCHHHHH------
Confidence 3444443 23579999997 9999999998875 477765 467653 2222222 34677788999986
Q ss_pred CCccEEEEcCC-chhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 105 KARAVVIDFTD-ASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 105 ~~~DVVIDfT~-p~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
. +|+||.+.+ +..+.+.+...++ .|. +|+-++...+...+++.+..++.++..+-+|
T Consensus 70 ~-aDvvi~~vp~~~~~~~v~~~l~~~l~~g~-ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 130 (296)
T 3qha_A 70 A-ADLIHITVLDDAQVREVVGELAGHAKPGT-VIAIHSTISDTTAVELARDLKARDIHIVDAP 130 (296)
T ss_dssp T-SSEEEECCSSHHHHHHHHHHHHTTCCTTC-EEEECSCCCHHHHHHHHHHHGGGTCEEEECC
T ss_pred h-CCEEEEECCChHHHHHHHHHHHHhcCCCC-EEEEeCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 5 899997776 3445555544443 344 4444444456666677777777677666554
No 117
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=98.21 E-value=2.6e-06 Score=80.13 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=66.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceec-CHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~--~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVV 110 (300)
|++||+|+|++|++|+.+++.+. .+|.++|+++.++...|+... +.| ..+.+.+ +.++ + .++|+|
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g----~~i~~~~~~~~~-~------~~~DvV 72 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAE----SSLRVGDVDSFD-F------SSVGLA 72 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETT----EEEECEEGGGCC-G------GGCSEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCC----cceEEecCCHHH-h------cCCCEE
Confidence 56899999999999999999998 668999998877544443221 111 1122221 2222 2 368999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
+.++......+.+..++++|+.+|.-+.
T Consensus 73 ~~a~g~~~s~~~a~~~~~aG~kvId~Sa 100 (340)
T 2hjs_A 73 FFAAAAEVSRAHAERARAAGCSVIDLSG 100 (340)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred EEcCCcHHHHHHHHHHHHCCCEEEEeCC
Confidence 9888888889999999999998776443
No 118
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.20 E-value=7.7e-06 Score=74.65 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=77.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
|+||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. +.|+..++|++++++ ++|+||.+.
T Consensus 3 m~~I~iiG~-G~mG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~v 67 (302)
T 2h78_A 3 MKQIAFIGL-GHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVISML 67 (302)
T ss_dssp CCEEEEECC-STTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEEECC
T ss_pred CCEEEEEee-cHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCeEcCCHHHHHh------CCCeEEEEC
Confidence 589999998 9999999998875 477765 457642 2222222 346777889999884 789999777
Q ss_pred C-chhHHHHHH---HH---HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 115 D-ASTVYDNVK---QA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 115 ~-p~~~~~~~~---~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
+ +..+.+.+. .. +..+. +|+-++.......+++.+..++.++.++-+|++.
T Consensus 68 p~~~~~~~v~~~~~~~~~~l~~~~-~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~ 125 (302)
T 2h78_A 68 PASQHVEGLYLDDDGLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (302)
T ss_dssp SCHHHHHHHHHSSSCGGGSSCSSC-EEEECSCCCHHHHHHHHHHHHHTTCCEEECCEES
T ss_pred CCHHHHHHHHcCchhHHhcCCCCc-EEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccC
Confidence 5 444444443 22 23344 4555555555666677777777778888788766
No 119
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.20 E-value=1.4e-05 Score=72.61 Aligned_cols=112 Identities=15% Similarity=0.105 Sum_probs=76.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
+||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. +.|+..++|++++++ ++|+||.+.+
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVK-AGCSVT-IWNRSP--EKAEELA----ALGAERAATPCEVVE------SCPVTFAMLA 66 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CEEEEEee-cHHHHHHHHHHHH-CCCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCEEEEEcC
Confidence 68999998 9999999999875 478876 577653 2223332 346777889999985 6899997776
Q ss_pred -chhHHHHH---H---HHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 116 -ASTVYDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 116 -p~~~~~~~---~---~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
|..+.+.+ . ..++.|..+ +-+++.+++..+++.+..++.++..+-+|
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~v-i~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGY-VDMSTVDPATSQRIGVAVVAKGGRFLEAP 120 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEE-EECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEE-EeCCCCCHHHHHHHHHHHHHhCCEEEECC
Confidence 44555554 2 334455544 44555566666777777777777665554
No 120
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=98.19 E-value=3.4e-06 Score=79.48 Aligned_cols=134 Identities=15% Similarity=0.162 Sum_probs=81.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhhh--c--Cc-CCCCccee--
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMVC--D--ME-QPLEIPVM-- 91 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~-------------~~g~d~~~~~--g--~~-~~~gv~v~-- 91 (300)
||+||+|+|+ |++|+.+++++.++ |++|++++.|.. ..|+-.+++. + +. ....++++
T Consensus 1 M~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEec
Confidence 5689999999 99999999999888 999999987641 1121111100 0 00 00013333
Q ss_pred cCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEE-EeCCC-----------CCHHHHHHHHHHhhhCCCeE
Q 022250 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSV-VYVPH-----------IQLETVSALSAFCDKASMGC 159 (300)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vV-igTTG-----------~~~e~~~~L~~~a~~~~i~i 159 (300)
.|++++.- .+.++|+|+++|......+.+...++.|..-| |-.++ .+.++ +. ..+..+
T Consensus 80 ~dp~~l~w---~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~---~~----~~~~~I 149 (339)
T 3b1j_A 80 RNPLNLPW---KEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSE---YR----HEDFAV 149 (339)
T ss_dssp SCGGGSCT---TTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGG---CC----TTTCSE
T ss_pred CChHHCcc---cccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHH---hC----cCCCeE
Confidence 35555420 01378999999988888999999999998833 32222 22221 11 101233
Q ss_pred EEcCCCcHHHHHHHHHHHHhc
Q 022250 160 LIAPTLSIGSILLQQAAISAS 180 (300)
Q Consensus 160 v~a~N~SiGv~ll~~~a~~~~ 180 (300)
+ +|=|-..|-+.-+++.+-
T Consensus 150 I--SnasCtTn~lap~lk~L~ 168 (339)
T 3b1j_A 150 I--SNASCTTNCLAPVAKVLH 168 (339)
T ss_dssp E--ECCCHHHHHHHHHHHHHH
T ss_pred E--ECCcchhhHHHHHHHHHH
Confidence 4 677777776666666654
No 121
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=98.17 E-value=3.6e-06 Score=80.35 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=63.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhh--c--Cc-CCCCccee--
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC--D--ME-QPLEIPVM-- 91 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~-------------~~~g~d~~~~~--g--~~-~~~gv~v~-- 91 (300)
||+||+|+|+ |++|+.+++++.++ +++||+++-|. ...|+-.+++. + +. ....++++
T Consensus 1 M~ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECC
T ss_pred CCcEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEec
Confidence 5689999999 99999999999888 89999998773 11222111100 0 00 00013333
Q ss_pred cCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC
Q 022250 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR 132 (300)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~ 132 (300)
.|++++.-. +.++|+|+++|......+.+...++.|..
T Consensus 80 ~dp~~l~w~---~~gvDvV~e~TG~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 80 RNPLNLPWK---EWDIDLVIESTGVFVTAEGASKHIQAGAK 117 (380)
T ss_dssp SCGGGCCHH---HHTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred CChHHCCcc---cCCCCEEEECCCccccHHHHHHHHHcCCc
Confidence 355554100 02789999999888889999999999987
No 122
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.16 E-value=2e-05 Score=71.79 Aligned_cols=114 Identities=9% Similarity=0.096 Sum_probs=75.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc---EEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM---EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~---eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
++||+|+|+ |+||+.+++.+.+. ++ + +.++|++. ..+..+. ..+|+.+++|..++++ ++|+||
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~-g~~~~~-V~v~dr~~--~~~~~l~---~~~gi~~~~~~~~~~~------~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIAN-GYDPNR-ICVTNRSL--DKLDFFK---EKCGVHTTQDNRQGAL------NADVVV 68 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHT-TCCGGG-EEEECSSS--HHHHHHH---HTTCCEEESCHHHHHS------SCSEEE
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHC-CCCCCe-EEEEeCCH--HHHHHHH---HHcCCEEeCChHHHHh------cCCeEE
Confidence 589999998 99999999998764 34 4 44677653 2233333 2457888889888884 789999
Q ss_pred EcCCchhHHHHHHHHHHc---CCCEEEeC-CCCCHHHHHHHHHHhhhCCCeEE-EcCCCc
Q 022250 112 DFTDASTVYDNVKQATAF---GMRSVVYV-PHIQLETVSALSAFCDKASMGCL-IAPTLS 166 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~---G~~vVigT-TG~~~e~~~~L~~~a~~~~i~iv-~a~N~S 166 (300)
.+..|....+.+...... +..+|+.. .|++.+. |.+.... +.+++ .-||..
T Consensus 69 lav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~---l~~~l~~-~~~vvr~mPn~p 124 (280)
T 3tri_A 69 LAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPL---IEKWLGK-ASRIVRAMPNTP 124 (280)
T ss_dssp ECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHH---HHHHHTC-CSSEEEEECCGG
T ss_pred EEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHH---HHHHcCC-CCeEEEEecCCh
Confidence 999888877776655432 34466554 4888654 4444432 23444 336643
No 123
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.12 E-value=2.6e-05 Score=71.81 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=76.2
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
...|+||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. +.|+..++|++++++ ++|+||
T Consensus 18 ~~~m~~I~iIG~-G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~~~~~------~aDvvi 82 (310)
T 3doj_A 18 GSHMMEVGFLGL-GIMGKAMSMNLLK-NGFKVT-VWNRTL--SKCDELV----EHGASVCESPAEVIK------KCKYTI 82 (310)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEEE
T ss_pred cccCCEEEEECc-cHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCeEcCCHHHHHH------hCCEEE
Confidence 344789999998 9999999999875 477766 477653 2223332 346777889999885 689999
Q ss_pred EcCCc-hhHHHHH---HH---HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 112 DFTDA-STVYDNV---KQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 112 DfT~p-~~~~~~~---~~---al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
.+.+. ..+.+.+ .. .+..|. +|+-+++.++...+++.+..++.++..+-+|
T Consensus 83 ~~vp~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p 140 (310)
T 3doj_A 83 AMLSDPCAALSVVFDKGGVLEQICEGK-GYIDMSTVDAETSLKINEAITGKGGRFVEGP 140 (310)
T ss_dssp ECCSSHHHHHHHHHSTTCGGGGCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEcCCHHHHHHHHhCchhhhhccCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 77643 3444444 21 233444 4445555566666777777777677655544
No 124
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=98.11 E-value=6.2e-06 Score=78.45 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=68.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCcCCCCcceec-CHHHHHhcccccCCccEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVV 110 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVV 110 (300)
|++||+|+|+||..|+.+++.+.++ |..+|+.+......|+... +.| ....+.+ +. +.+ .++|+|
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~----~~~~~~~~~~-~~~------~~~Dvv 68 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD----QDITIEETTE-TAF------EGVDIA 68 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT----EEEEEEECCT-TTT------TTCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC----CCceEeeCCH-HHh------cCCCEE
Confidence 6799999999999999999988876 8888888776555555443 211 1122211 21 223 478999
Q ss_pred EEcCCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
+.++......+.+..+++.|+.+|.-+..|
T Consensus 69 f~a~~~~~s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 69 LFSAGSSTSAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred EECCChHhHHHHHHHHHHCCCEEEEcCCcc
Confidence 988888888999999999999888766543
No 125
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.10 E-value=2.8e-05 Score=73.56 Aligned_cols=121 Identities=12% Similarity=0.007 Sum_probs=74.1
Q ss_pred ecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc
Q 022250 28 STNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 28 ~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (300)
++|.+..++||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. ..|+..++|++++++. ...+
T Consensus 15 ~~~~Mm~~mkIgiIGl-G~mG~~~A~~L~~-~G~~V~-v~dr~~--~~~~~l~----~~g~~~~~s~~e~~~~---a~~~ 82 (358)
T 4e21_A 15 TENLYFQSMQIGMIGL-GRMGADMVRRLRK-GGHECV-VYDLNV--NAVQALE----REGIAGARSIEEFCAK---LVKP 82 (358)
T ss_dssp -------CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCBCCSSHHHHHHH---SCSS
T ss_pred cchhhhcCCEEEEECc-hHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHH----HCCCEEeCCHHHHHhc---CCCC
Confidence 4555444589999997 9999999999885 467765 567643 2223332 3467778899998852 1245
Q ss_pred cEEEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEE
Q 022250 108 AVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCLI 161 (300)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~ 161 (300)
|+||-+.++..+.+.+...+. .|.-+|..+|.. +....++.+..++.++..+=
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNSH-YQDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEEECSSCC-HHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCC-hHHHHHHHHHHHHCCCEEEe
Confidence 999988777755555554433 344455444444 44455666666666766553
No 126
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=98.10 E-value=6.2e-06 Score=77.66 Aligned_cols=101 Identities=23% Similarity=0.193 Sum_probs=66.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHh---cCCcEEEEEEecC-------------CCCcchhhh--hc--Cc-CCCCccee-
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSH-------------SVGEDIGMV--CD--ME-QPLEIPVM- 91 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~---~~~~eLvg~vd~~-------------~~g~d~~~~--~g--~~-~~~gv~v~- 91 (300)
||+||+|+|+ |++|+.+++++.+ +|++||+++.|.. ..|+-.++. .+ +. ....++++
T Consensus 1 M~ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~ 79 (339)
T 2x5j_O 1 MTVRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLH 79 (339)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CCeEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEe
Confidence 4689999998 9999999999998 8999999988741 011100000 00 00 00123343
Q ss_pred -cCHHHHH-hcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCCC
Q 022250 92 -SDLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (300)
Q Consensus 92 -~dl~~~l-~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTTG 139 (300)
.|++++. . +.++|+|+++|......+.+...++.|.. |||-.++
T Consensus 80 ~~dp~~l~~~----~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 80 ERSLQSLPWR----ELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp CSSGGGCCHH----HHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cCChHHCccc----ccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 2444431 1 02689999999888889999999999987 5555555
No 127
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.09 E-value=3.4e-06 Score=75.03 Aligned_cols=98 Identities=9% Similarity=0.108 Sum_probs=65.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc----EEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM----EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~----eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (300)
|++||+|+|+ |+||+.+++.+.+. ++ ++. ++|++. ..+..+. ..+|+.+++|.+++++ ++|+
T Consensus 1 M~~~i~iIG~-G~mG~~~a~~l~~~-g~~~~~~V~-~~~r~~--~~~~~~~---~~~g~~~~~~~~e~~~------~aDv 66 (247)
T 3gt0_A 1 MDKQIGFIGC-GNMGMAMIGGMINK-NIVSSNQII-CSDLNT--ANLKNAS---EKYGLTTTTDNNEVAK------NADI 66 (247)
T ss_dssp CCCCEEEECC-SHHHHHHHHHHHHT-TSSCGGGEE-EECSCH--HHHHHHH---HHHCCEECSCHHHHHH------HCSE
T ss_pred CCCeEEEECc-cHHHHHHHHHHHhC-CCCCCCeEE-EEeCCH--HHHHHHH---HHhCCEEeCChHHHHH------hCCE
Confidence 5689999998 99999999998754 44 544 577642 2222222 2346777889999885 6899
Q ss_pred EEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCHHHH
Q 022250 110 VIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETV 145 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~e~~ 145 (300)
||.+++|....+.+..... .+.-+|.-+.|.+.+.+
T Consensus 67 Vilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l 105 (247)
T 3gt0_A 67 LILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIEST 105 (247)
T ss_dssp EEECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHHHH
T ss_pred EEEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHH
Confidence 9999988877777655432 34434444558886543
No 128
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.09 E-value=1.4e-05 Score=73.55 Aligned_cols=119 Identities=12% Similarity=0.054 Sum_probs=75.9
Q ss_pred CCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccE
Q 022250 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (300)
++..+++||+|+|+ |.||+.+++.+.+ .+++++ ++|++. ..+..+. +.|+..+++++++++ ++|+
T Consensus 4 ~~~~~~~~IgiIG~-G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~e~~~------~aDv 68 (306)
T 3l6d_A 4 SDESFEFDVSVIGL-GAMGTIMAQVLLK-QGKRVA-IWNRSP--GKAAALV----AAGAHLCESVKAALS------ASPA 68 (306)
T ss_dssp CCCCCSCSEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSSH--HHHHHHH----HHTCEECSSHHHHHH------HSSE
T ss_pred CcccCCCeEEEECC-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCE
Confidence 34455789999997 9999999999875 467765 467643 2222222 235667789999985 6899
Q ss_pred EEEcCCchh-HHHHHH----HHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCC
Q 022250 110 VIDFTDAST-VYDNVK----QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 110 VIDfT~p~~-~~~~~~----~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N 164 (300)
||.+.++.. +.+.+. ..+..|.-+|. ++..+++..+++.+..++.++..+-+|-
T Consensus 69 Vi~~vp~~~~~~~v~~~~~l~~~~~g~ivid-~st~~~~~~~~l~~~~~~~g~~~vdapv 127 (306)
T 3l6d_A 69 TIFVLLDNHATHEVLGMPGVARALAHRTIVD-YTTNAQDEGLALQGLVNQAGGHYVKGMI 127 (306)
T ss_dssp EEECCSSHHHHHHHHTSTTHHHHTTTCEEEE-CCCCCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEeCCHHHHHHHhcccchhhccCCCEEEE-CCCCCHHHHHHHHHHHHHcCCeEEeccc
Confidence 997776443 444332 22344554554 4444445556777777777777665543
No 129
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=98.08 E-value=1e-05 Score=76.51 Aligned_cols=98 Identities=14% Similarity=0.068 Sum_probs=68.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC-----CcEEEEEEecCCCCcchhhhhcCcCC-CCccee-cCHHHHHhcccccCCc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR-----GMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVM-SDLTMVLGSISQSKAR 107 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-----~~eLvg~vd~~~~g~d~~~~~g~~~~-~gv~v~-~dl~~~l~~~~~~~~~ 107 (300)
|+||+|+|+||.+|+.+++.+.+++ .+|++.+.++...|+...+..+.-.. ..+.+. .+.+ .+ .++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~-~~------~~~ 81 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAA-VL------GGH 81 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHH-HH------TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHH-Hh------cCC
Confidence 5899999999999999999999988 89999988765555544332110000 122222 1333 34 378
Q ss_pred cEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 108 DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
|+|+.++......+.+..+ ++|+.+|.-+..+
T Consensus 82 DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 82 DAVFLALPHGHSAVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp SEEEECCTTSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred CEEEECCCCcchHHHHHHH-hCCCEEEEECCCc
Confidence 9999777777788999988 9998877666544
No 130
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.07 E-value=1.5e-05 Score=72.26 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=75.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||+|+|+ |.||+.+++.+.+ .++++. ++|++. ..+..+. +.|+.++++++++++ ++|+||.+++
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMK-HGYPLI-IYDVFP--DACKEFQ----DAGEQVVSSPADVAE------KADRIITMLP 65 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHH-TTCCEE-EECSST--HHHHHHH----TTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CeEEEEec-cHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCeecCCHHHHHh------cCCEEEEeCC
Confidence 48999998 9999999998875 467755 577643 2222332 346777889988874 6899998774
Q ss_pred -chhHHHHHHH------HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 116 -ASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 116 -p~~~~~~~~~------al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
|....+.+.. .++.|. +|+-+.+.+.+..+++.+...+.++..+-+ ..+.|.
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~-~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~-p~~~g~ 124 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGS-LLIDSSTIDPAVSKELAKEVEKMGAVFMDA-PVSGGV 124 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEESHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEEc-CCCCCh
Confidence 4444444432 223455 444477888877777766665545443333 355553
No 131
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.07 E-value=1.5e-05 Score=71.78 Aligned_cols=113 Identities=13% Similarity=-0.011 Sum_probs=70.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
|+||+|+|+ |.||+.+++.+.+ ++++. ++|++. .....+. +.|+..++ +++++ .++|+||.++
T Consensus 1 M~~i~iiG~-G~~G~~~a~~l~~--g~~V~-~~~~~~--~~~~~~~----~~g~~~~~-~~~~~------~~~D~vi~~v 63 (289)
T 2cvz_A 1 MEKVAFIGL-GAMGYPMAGHLAR--RFPTL-VWNRTF--EKALRHQ----EEFGSEAV-PLERV------AEARVIFTCL 63 (289)
T ss_dssp -CCEEEECC-STTHHHHHHHHHT--TSCEE-EECSST--HHHHHHH----HHHCCEEC-CGGGG------GGCSEEEECC
T ss_pred CCeEEEEcc-cHHHHHHHHHHhC--CCeEE-EEeCCH--HHHHHHH----HCCCcccC-HHHHH------hCCCEEEEeC
Confidence 468999998 9999999998875 78854 577643 2222221 12344444 56666 3789999888
Q ss_pred Cchh-HHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 115 DAST-VYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 115 ~p~~-~~~~~~~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
++.. ..+.+... ++.|..+|..++ ......++|.+..++.++.++-+|++
T Consensus 64 ~~~~~~~~v~~~l~~~l~~~~~vv~~s~-~~~~~~~~l~~~~~~~g~~~~~~p~~ 117 (289)
T 2cvz_A 64 PTTREVYEVAEALYPYLREGTYWVDATS-GEPEASRRLAERLREKGVTYLDAPVS 117 (289)
T ss_dssp SSHHHHHHHHHHHTTTCCTTEEEEECSC-CCHHHHHHHHHHHHTTTEEEEECCEE
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 7554 44444332 234555554444 34445567777777667777777754
No 132
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.04 E-value=3.4e-05 Score=75.12 Aligned_cols=129 Identities=13% Similarity=0.089 Sum_probs=85.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC-cc-----ee--cCHHHHHhcccccCC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-IP-----VM--SDLTMVLGSISQSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g-v~-----v~--~dl~~~l~~~~~~~~ 106 (300)
+.+|+|+|+ |.||+.+++.+.+ .+.+ +.+++++. ..+..++ ...+ +. +. +++++++ .+
T Consensus 3 ~k~VlViGa-G~iG~~ia~~L~~-~G~~-V~v~~R~~--~~a~~la---~~~~~~~~~~~Dv~d~~~l~~~l------~~ 68 (450)
T 1ff9_A 3 TKSVLMLGS-GFVTRPTLDVLTD-SGIK-VTVACRTL--ESAKKLS---AGVQHSTPISLDVNDDAALDAEV------AK 68 (450)
T ss_dssp CCEEEEECC-STTHHHHHHHHHT-TTCE-EEEEESSH--HHHHHTT---TTCTTEEEEECCTTCHHHHHHHH------TT
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CcCE-EEEEECCH--HHHHHHH---HhcCCceEEEeecCCHHHHHHHH------cC
Confidence 468999995 9999999999885 6788 45566542 1222222 1111 11 11 2444566 37
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHH--HHHHHHHHh
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI--LLQQAAISA 179 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~--ll~~~a~~~ 179 (300)
+|+||.++.+..+.+....|++.|++++..+ -..+ ....|.++|+++|+.++...+|..|.. +..+++.+.
T Consensus 69 ~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~-~~~~-~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 69 HDLVISLIPYTFHATVIKSAIRQKKHVVTTS-YVSP-AMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp SSEEEECCC--CHHHHHHHHHHHTCEEEESS-CCCH-HHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred CcEEEECCccccchHHHHHHHhCCCeEEEee-cccH-HHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 9999999877666677788999999998653 2333 456788889999999998888876764 334555554
No 133
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.02 E-value=2.5e-05 Score=73.83 Aligned_cols=129 Identities=13% Similarity=0.176 Sum_probs=76.8
Q ss_pred CCCCC-cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhh----------hcCcCCCCcceecCHHHHH
Q 022250 30 NPPQS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMV----------CDMEQPLEIPVMSDLTMVL 98 (300)
Q Consensus 30 ~~~~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~----------~g~~~~~gv~v~~dl~~~l 98 (300)
+|++| +|||+|+|+ |.||..++..+.+ .+.++. +++++. ..+..+ -|..-+.++.+++|+++++
T Consensus 23 ~~m~~~~mkI~VIGa-G~mG~alA~~La~-~G~~V~-l~~r~~--~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~ 97 (356)
T 3k96_A 23 NAMEPFKHPIAILGA-GSWGTALALVLAR-KGQKVR-LWSYES--DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASL 97 (356)
T ss_dssp ----CCCSCEEEECC-SHHHHHHHHHHHT-TTCCEE-EECSCH--HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHH
T ss_pred hcccccCCeEEEECc-cHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHH
Confidence 34433 589999998 9999999998875 456654 456431 111111 1111112355678998888
Q ss_pred hcccccCCccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCCCCHHH--H-HHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 99 GSISQSKARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLET--V-SALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG~~~e~--~-~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+ ++|+||-+.++....+.+.... ..+..+|.-+.|+..+. . +.+.+..-...+.++..|||.--+
T Consensus 98 ~------~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev 168 (356)
T 3k96_A 98 E------GVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEV 168 (356)
T ss_dssp T------TCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHH
T ss_pred h------cCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHH
Confidence 4 7899997777766666655443 34566776677876542 1 223333323446778899987643
No 134
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.00 E-value=6.7e-05 Score=69.01 Aligned_cols=117 Identities=14% Similarity=0.134 Sum_probs=77.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|.-||+++|. |.||..+++.+.+ .+++++ ++|++. ..+..+ .+.|..+.+++.++.+ ++|+||-+
T Consensus 4 Ms~kIgfIGL-G~MG~~mA~~L~~-~G~~V~-v~dr~~--~~~~~l----~~~G~~~~~s~~e~~~------~~dvvi~~ 68 (297)
T 4gbj_A 4 MSEKIAFLGL-GNLGTPIAEILLE-AGYELV-VWNRTA--SKAEPL----TKLGATVVENAIDAIT------PGGIVFSV 68 (297)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHH-TTCEEE-EC---------CTT----TTTTCEECSSGGGGCC------TTCEEEEC
T ss_pred CCCcEEEEec-HHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHH----HHcCCeEeCCHHHHHh------cCCceeee
Confidence 4569999997 9999999999885 588876 477643 122223 2457788889999874 78998865
Q ss_pred CCchh-HHHH----HHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 114 TDAST-VYDN----VKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 114 T~p~~-~~~~----~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
-+++. ..+. +...+..|. +||-++..+++..+++.+.++++|+..+=+|=+.
T Consensus 69 l~~~~~~~~v~~~~~~~~~~~~~-iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 69 LADDAAVEELFSMELVEKLGKDG-VHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp CSSHHHHHHHSCHHHHHHHCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred ccchhhHHHHHHHHHHhhcCCCe-EEEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 54333 3332 223333443 5555555667888889999999998888777543
No 135
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=97.99 E-value=1.3e-05 Score=75.93 Aligned_cols=121 Identities=12% Similarity=0.097 Sum_probs=80.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee-----cC--------------HHH
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-----SD--------------LTM 96 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~-----~d--------------l~~ 96 (300)
.||+|+|+||.+|+..++.+.+.+++++++....... ....+.+ .+++.+++ ++ +.+
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~-~~l~~q~---~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~e 79 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNL-ELAFKIV---KEFNVKNVAITGDVEFEDSSINVWKGSHSIEE 79 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCH-HHHHHHH---HHHTCCEEEECSSCCCCCSSSEEEESTTHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCH-HHHHHHH---HHcCCCEEEEccHHHHHHHHHHHccCHHHHHH
Confidence 7899999999999999999988878999998542110 0111111 11122222 12 245
Q ss_pred HHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 97 ~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
++. ..++|+|+..+.-.+.......|+++|+++.+..-.-.-..-+.+.++++++++.++ |=.|
T Consensus 80 l~~----~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~ll--PVDS 143 (376)
T 3a06_A 80 MLE----ALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELI--PVDS 143 (376)
T ss_dssp HHH----HHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEE--ECSH
T ss_pred Hhc----CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEE--EEcc
Confidence 554 246899999998889999999999999999994322112234567777887766554 5555
No 136
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.99 E-value=5.7e-05 Score=69.94 Aligned_cols=113 Identities=11% Similarity=0.064 Sum_probs=73.8
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCC----Ccch-hhhhcCcCCCCcceec-CHHHHHhcccccC
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSV----GEDI-GMVCDMEQPLEIPVMS-DLTMVLGSISQSK 105 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~----g~d~-~~~~g~~~~~gv~v~~-dl~~~l~~~~~~~ 105 (300)
+|++||+|+|+ |.||..+++.+.+ .+ +++. ++|++.. .++. ..+. +.|+ .+ +++++++
T Consensus 22 ~M~m~IgvIG~-G~mG~~lA~~L~~-~G~~~V~-~~dr~~~~~~~~~~~~~~~~----~~g~--~~~s~~e~~~------ 86 (317)
T 4ezb_A 22 SMMTTIAFIGF-GEAAQSIAGGLGG-RNAARLA-AYDLRFNDPAASGALRARAA----ELGV--EPLDDVAGIA------ 86 (317)
T ss_dssp TSCCEEEEECC-SHHHHHHHHHHHT-TTCSEEE-EECGGGGCTTTHHHHHHHHH----HTTC--EEESSGGGGG------
T ss_pred ccCCeEEEECc-cHHHHHHHHHHHH-cCCCeEE-EEeCCCccccchHHHHHHHH----HCCC--CCCCHHHHHh------
Confidence 36789999997 9999999998875 46 7766 5775420 0011 1111 2344 55 7778774
Q ss_pred CccEEEEcCCchhHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE
Q 022250 106 ARAVVIDFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~--G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv 160 (300)
++|+||-+.++....+.+...... .-.+|+-+++.++...+++.+..++.++..+
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~ 143 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFV 143 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEE
T ss_pred cCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 789999888877777766554442 1235666666667667777777776665443
No 137
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.99 E-value=2.3e-05 Score=71.12 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=75.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
|+||+|+|+ |.||+.+++.+.+. ++++. ++|++. ..+..+. +.|+..++|++++++ ++|+||.+.
T Consensus 1 M~~I~iiG~-G~mG~~~a~~l~~~-G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~advvi~~v 65 (287)
T 3pdu_A 1 MTTYGFLGL-GIMGGPMAANLVRA-GFDVT-VWNRNP--AKCAPLV----ALGARQASSPAEVCA------ACDITIAML 65 (287)
T ss_dssp CCCEEEECC-STTHHHHHHHHHHH-TCCEE-EECSSG--GGGHHHH----HHTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEcc-CHHHHHHHHHHHHC-CCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHH------cCCEEEEEc
Confidence 469999997 99999999998754 67765 467653 2222222 236677889999885 689999777
Q ss_pred Cch-hHHHHH---HH---HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 115 DAS-TVYDNV---KQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 115 ~p~-~~~~~~---~~---al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
++. .+.+.+ .. .+..|. +|+-++..++...+++.+..++.++..+-+|.+
T Consensus 66 ~~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 122 (287)
T 3pdu_A 66 ADPAAAREVCFGANGVLEGIGGGR-GYIDMSTVDDETSTAIGAAVTARGGRFLEAPVS 122 (287)
T ss_dssp SSHHHHHHHHHSTTCGGGTCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CCHHHHHHHHcCchhhhhcccCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEECCcc
Confidence 654 444444 22 233444 444455555666677777777777776666644
No 138
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.98 E-value=2.3e-05 Score=74.92 Aligned_cols=100 Identities=21% Similarity=0.156 Sum_probs=70.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCcCC-------CCcceec-CHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQP-------LEIPVMS-DLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~~~~~g~~~~-------~gv~v~~-dl~~~l~~~~~~ 104 (300)
+|+||+|+|+||-.|+.+++.+.++|.+||+.+.. ....|+...+...+... ....+.+ +.++.+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~------ 91 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNF------ 91 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTG------
T ss_pred CccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhc------
Confidence 36899999999999999999999999999998874 44567766543211000 0112211 111123
Q ss_pred CCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCC
Q 022250 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG 139 (300)
.++|+|+.++......+.+..+++.|+.||.=+..
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKN 126 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHHHHTTCEEEECCST
T ss_pred ccCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCc
Confidence 36899997777777899999999999998876553
No 139
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.97 E-value=6.5e-07 Score=81.23 Aligned_cols=94 Identities=9% Similarity=0.026 Sum_probs=53.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|||||+|+|+ |+||+.+++.+.+. ++++.++|++. ..+..+. ..+++ .++|+++++ .++|+||.+
T Consensus 1 M~m~I~iIG~-G~mG~~la~~l~~~--~~v~~v~~~~~--~~~~~~~---~~~g~-~~~~~~~~~------~~~DvVila 65 (276)
T 2i76_A 1 MSLVLNFVGT-GTLTRFFLECLKDR--YEIGYILSRSI--DRARNLA---EVYGG-KAATLEKHP------ELNGVVFVI 65 (276)
T ss_dssp ---CCEEESC-CHHHHHHHHTTC------CCCEECSSH--HHHHHHH---HHTCC-CCCSSCCCC------C---CEEEC
T ss_pred CCceEEEEeC-CHHHHHHHHHHHHc--CcEEEEEeCCH--HHHHHHH---HHcCC-ccCCHHHHH------hcCCEEEEe
Confidence 5689999998 99999999987654 77767787642 1222222 12344 566777665 368999988
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCC-CCCHH
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLE 143 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTT-G~~~e 143 (300)
++|..+.+.+......+. +|+-++ +.+.+
T Consensus 66 v~~~~~~~v~~~l~~~~~-ivi~~s~~~~~~ 95 (276)
T 2i76_A 66 VPDRYIKTVANHLNLGDA-VLVHCSGFLSSE 95 (276)
T ss_dssp SCTTTHHHHHTTTCCSSC-CEEECCSSSCGG
T ss_pred CChHHHHHHHHHhccCCC-EEEECCCCCcHH
Confidence 888887766654332344 444444 55443
No 140
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=97.96 E-value=4.5e-05 Score=72.47 Aligned_cols=92 Identities=12% Similarity=0.038 Sum_probs=62.8
Q ss_pred cceEEEEcCCchHHHHHHH-HHHhc--CCcEEEEEEecCCCCcchhhhhcCcCCCCccee--cCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVI-AVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~-~i~~~--~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DV 109 (300)
|+||+|+|++|.+|+.+++ .+.++ +..++..+... ..|+....+-| ..+.+. ++.++ ++ ++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~g----~~i~~~~~~~~~~-~~------~~Dv 68 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFGG----TTGTLQDAFDLEA-LK------ALDI 68 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGGT----CCCBCEETTCHHH-HH------TCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccCC----CceEEEecCChHH-hc------CCCE
Confidence 5799999999999999999 55543 23566554433 35554432222 123333 24444 32 7899
Q ss_pred EEEcCCchhHHHHHHHHHHcCCC-EEEeCC
Q 022250 110 VIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~-vVigTT 138 (300)
|++++......+.+..+++.|++ +||.-+
T Consensus 69 Vf~a~g~~~s~~~a~~~~~~G~k~vVID~s 98 (367)
T 1t4b_A 69 IVTCQGGDYTNEIYPKLRESGWQGYWIDAA 98 (367)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred EEECCCchhHHHHHHHHHHCCCCEEEEcCC
Confidence 99999888899999999999974 666655
No 141
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=97.96 E-value=1.8e-05 Score=74.19 Aligned_cols=101 Identities=24% Similarity=0.202 Sum_probs=67.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcch---------hhhhcCc----CCC-----Ccceec--CH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDI---------GMVCDME----QPL-----EIPVMS--DL 94 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~---------~~~~g~~----~~~-----gv~v~~--dl 94 (300)
|+||+|+|+ |++|+.+++++.++|++||+++-|....+.-+ +.+.|.- ... .+.++. |.
T Consensus 1 ~ikVgI~G~-G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECc-CHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 589999997 99999999999999999999998742211100 0010000 000 112332 44
Q ss_pred HHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 95 TMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 95 ~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
+++ .. ..++|+|+++|......+.+...++.|..+|+=+..+
T Consensus 80 ~~i~w~----~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 80 ANLKWD----EVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp GGGCHH----HHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCccc----cccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 443 10 0268999999988888999999999999988654333
No 142
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.94 E-value=1.3e-05 Score=75.92 Aligned_cols=99 Identities=19% Similarity=0.181 Sum_probs=64.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe-cCCCCcc---------hhhhhcCc----CC-----CCcceec--C
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGED---------IGMVCDME----QP-----LEIPVMS--D 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d---------~~~~~g~~----~~-----~gv~v~~--d 93 (300)
|+||+|+|+ |++|+.+++++.++|++||+++-| ....+.- -+.+.|.- .. ..++++. |
T Consensus 17 ~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 589999999 999999999999999999999988 2211100 00010000 00 0123332 4
Q ss_pred HHHHH-hcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC
Q 022250 94 LTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (300)
Q Consensus 94 l~~~l-~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT 138 (300)
++++. . +.++|+|+++|......+.+...++.|.. +||-.+
T Consensus 96 p~~i~w~----~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 96 PAEIPWG----ASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp GGGCCHH----HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred hHHCCcc----cCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCC
Confidence 44431 0 03689999999888889999999999974 555444
No 143
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.94 E-value=3e-05 Score=73.32 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=69.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee-cCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~-~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+||..|+.+++.+.++|.+||+.+.+....|+...+....-. ..+.+. .|.+++.+ ++|+|+-+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~~~~~~~~~~~~------~~Dvvf~a 85 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSILSEFDPEKVSK------NCDVLFTA 85 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCBCBCCCHHHHHH------HCSEEEEC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCceEEeCCHHHhhc------CCCEEEEC
Confidence 79999999999999999999999999999998776667777665332101 123332 24555543 68999955
Q ss_pred CCchhHHHHHHHHHHcCCCEEEeCCCC
Q 022250 114 TDASTVYDNVKQATAFGMRSVVYVPHI 140 (300)
Q Consensus 114 T~p~~~~~~~~~al~~G~~vVigTTG~ 140 (300)
++.....+.+..+ .|+.||--+..|
T Consensus 86 lp~~~s~~~~~~~--~g~~VIDlSsdf 110 (351)
T 1vkn_A 86 LPAGASYDLVREL--KGVKIIDLGADF 110 (351)
T ss_dssp CSTTHHHHHHTTC--CSCEEEESSSTT
T ss_pred CCcHHHHHHHHHh--CCCEEEECChhh
Confidence 5556667777776 888877666554
No 144
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.91 E-value=5.1e-05 Score=67.60 Aligned_cols=104 Identities=18% Similarity=0.148 Sum_probs=69.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||+|+|+ |.||+.+++.+.+ .++++.. +|+.........+. +.|+. +|+++++. ++|+||.+.+
T Consensus 1 M~I~iIG~-G~mG~~la~~l~~-~g~~V~~-~~~~~~~~~~~~~~----~~g~~--~~~~~~~~------~aDvvi~~v~ 65 (264)
T 1i36_A 1 LRVGFIGF-GEVAQTLASRLRS-RGVEVVT-SLEGRSPSTIERAR----TVGVT--ETSEEDVY------SCPVVISAVT 65 (264)
T ss_dssp CEEEEESC-SHHHHHHHHHHHH-TTCEEEE-CCTTCCHHHHHHHH----HHTCE--ECCHHHHH------TSSEEEECSC
T ss_pred CeEEEEec-hHHHHHHHHHHHH-CCCeEEE-eCCccCHHHHHHHH----HCCCc--CCHHHHHh------cCCEEEEECC
Confidence 48999998 9999999998875 4778776 56521101112221 12443 66777774 7899998888
Q ss_pred chhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhh
Q 022250 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (300)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~ 154 (300)
+....+.+......-.++|+-+++.+.+..++|.+...+
T Consensus 66 ~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 66 PGVALGAARRAGRHVRGIYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp GGGHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHHHhh
Confidence 877666666555544447777777776666677777655
No 145
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=97.91 E-value=2.6e-05 Score=73.35 Aligned_cols=98 Identities=22% Similarity=0.206 Sum_probs=66.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhh---c----CcCCCCccee-
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC---D----MEQPLEIPVM- 91 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~-------------~~~g~d~~~~~---g----~~~~~gv~v~- 91 (300)
|+||+|+|+ |++|+.+++++.++ |++||+++-|. ...|+-.+++- + . ....++++
T Consensus 1 ~ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v-~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISV-DGKVIKVVS 78 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEE-TTEEEEEEC
T ss_pred CeEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEE-CCeEEEEEe
Confidence 589999999 99999999999988 99999998852 11222111110 0 0 00012233
Q ss_pred -cCHHHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 92 -SDLTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 92 -~dl~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
.|++++ .. +.++|+|+++|......+.+...++.|..+|+=+.
T Consensus 79 ~~dp~~i~w~----~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSa 123 (337)
T 1rm4_O 79 DRNPVNLPWG----DMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 123 (337)
T ss_dssp CSCGGGSCHH----HHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESS
T ss_pred cCChhhCccc----ccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECC
Confidence 344433 11 12689999999888889999999999988887543
No 146
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=97.90 E-value=0.00011 Score=59.21 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
+.||+|+|+ |.+|+.+++.+.+.++++++|++|.+
T Consensus 4 ~~~vlIiGa-G~~g~~l~~~l~~~~g~~vvg~~d~~ 38 (141)
T 3nkl_A 4 KKKVLIYGA-GSAGLQLANMLRQGKEFHPIAFIDDD 38 (141)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCcEEEEEEECC
Confidence 478999998 99999999999888899999999864
No 147
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.87 E-value=4.2e-05 Score=70.05 Aligned_cols=115 Identities=12% Similarity=0.101 Sum_probs=72.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-ecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVVID 112 (300)
+++||+|+|+ |.||+.+++.+.+ .++++. ++|++. ..+..+. +.|... ++|++++++ ++|+||.
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~e~~~------~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLR-AGLSTW-GADLNP--QACANLL----AEGACGAAASAREFAG------VVDALVI 70 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----HTTCSEEESSSTTTTT------TCSEEEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHH-CCCeEE-EEECCH--HHHHHHH----HcCCccccCCHHHHHh------cCCEEEE
Confidence 3579999997 9999999999875 578766 467642 2222222 235555 778888873 7899997
Q ss_pred cCCchhH-HHHH---H---HHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCC
Q 022250 113 FTDASTV-YDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 113 fT~p~~~-~~~~---~---~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N 164 (300)
+.++... .+.+ . ..++.|.-+| -++...+...+++.+..++.++..+-.|-
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~ivv-~~st~~~~~~~~~~~~~~~~g~~~~~~pv 128 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGSAVM-VSSTISSADAQEIAAALTALNLNMLDAPV 128 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTCEEE-ECSCCCHHHHHHHHHHHHTTTCEEEECCE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCCEEE-ecCCCCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 7765433 3333 1 2233454444 44445566667777777776776665553
No 148
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=97.85 E-value=0.00031 Score=66.31 Aligned_cols=141 Identities=15% Similarity=0.160 Sum_probs=94.5
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcC----------------------CcEEEEEEec--CCCCcchhhhhcCc-----
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKAR----------------------GMEVAGAIDS--HSVGEDIGMVCDME----- 83 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~----------------------~~eLvg~vd~--~~~g~d~~~~~g~~----- 83 (300)
+.++||+|+|. |+.|+++++-+...+ ++++++++|. .+.|++..+..=..
T Consensus 13 ~~~~rVaIVGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~ 91 (367)
T 1gr0_A 13 STEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTI 91 (367)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCC
T ss_pred ccCCCEEEECc-ChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchh
Confidence 45799999999 999999999665444 6789999994 34566543211000
Q ss_pred -----CCCCcc-----------------------eecCHHHHHhcccccCCccEEEEcCC---chhHHHHHHHHHHcCCC
Q 022250 84 -----QPLEIP-----------------------VMSDLTMVLGSISQSKARAVVIDFTD---ASTVYDNVKQATAFGMR 132 (300)
Q Consensus 84 -----~~~gv~-----------------------v~~dl~~~l~~~~~~~~~DVVIDfT~---p~~~~~~~~~al~~G~~ 132 (300)
.+.++. ...|+.+.++ +.++||+|.+-+ -++..-++..|++.|++
T Consensus 92 ~~~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~----~~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~ 167 (367)
T 1gr0_A 92 KIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALK----EAKVDVLVSYLPVGSEEADKFYAQCAIDAGVA 167 (367)
T ss_dssp CCSCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHH----HTTCSEEEECCCTTCHHHHHHHHHHHHHHTCE
T ss_pred hhhcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHH----HhCCcEEEEeeeCCCcCHHHHHHHHHHHcCCc
Confidence 001110 1125555554 478999998753 34456677899999999
Q ss_pred EEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc--HHHHHHHHH-HHHhc
Q 022250 133 SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQA-AISAS 180 (300)
Q Consensus 133 vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S--iGv~ll~~~-a~~~~ 180 (300)
.|-++|-+... ...+.++++++++| +..-.|= .|..++... +..+.
T Consensus 168 fvN~~P~~~~~-~P~~~el~~~~g~p-i~GdD~Ksq~G~T~~k~~La~~l~ 216 (367)
T 1gr0_A 168 FVNALPVFIAS-DPVWAKKFTDARVP-IVGDDIKSQVGATITHRVLAKLFE 216 (367)
T ss_dssp EEECSSCCSTT-SHHHHHHHHHHTCE-EEESSBCCSSCHHHHHHHHHHHHH
T ss_pred eEecCCccccC-CHHHHHHHHHcCCC-EeccccccccCCChHHHHHHHHHH
Confidence 99999955431 13477888999988 6677777 999988764 33433
No 149
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=97.83 E-value=3.1e-05 Score=72.77 Aligned_cols=97 Identities=25% Similarity=0.248 Sum_probs=64.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhhh--c--Cc-CCCCcceec--CH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMVC--D--ME-QPLEIPVMS--DL 94 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------------~~g~d~~~~~--g--~~-~~~gv~v~~--dl 94 (300)
|+||+|+|+ |++|+.+++++.++|++|++++-|.. ..|+-.++.- + +. ....+.++. |.
T Consensus 1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 589999999 99999999999999999999988741 1111000000 0 00 001234442 44
Q ss_pred HHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEe
Q 022250 95 TMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (300)
Q Consensus 95 ~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVig 136 (300)
+++ .. +.++|+|+++|......+.+...++.|.. +||-
T Consensus 80 ~~i~w~----~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId 119 (334)
T 3cmc_O 80 ENLAWG----EIGVDIVVESTGRFTKREDAAKHLEAGAKKVIIS 119 (334)
T ss_dssp GGCCTG----GGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEES
T ss_pred hhcCcc----cCccCEEEECCCchhhHHHHHHHHHCCCCEEEEe
Confidence 443 11 13789999999888889999999999973 5543
No 150
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.81 E-value=7.2e-05 Score=66.46 Aligned_cols=92 Identities=10% Similarity=0.074 Sum_probs=64.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC---cEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG---MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~---~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
+|||+|+|+ |.||+.+++.+.+... .++ .++|++.. ..|+.++++.+++++ ++|+||
T Consensus 4 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v-~~~~~~~~------------~~g~~~~~~~~~~~~------~~D~vi 63 (262)
T 2rcy_A 4 NIKLGFMGL-GQMGSALAHGIANANIIKKENL-FYYGPSKK------------NTTLNYMSSNEELAR------HCDIIV 63 (262)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHHTSSCGGGE-EEECSSCC------------SSSSEECSCHHHHHH------HCSEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCCCCCeE-EEEeCCcc------------cCceEEeCCHHHHHh------cCCEEE
Confidence 479999998 9999999998875431 444 45676431 135566778888874 689999
Q ss_pred EcCCchhHHHHHHHHHHc--CCCEEEeCCCCCHHHHH
Q 022250 112 DFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVS 146 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigTTG~~~e~~~ 146 (300)
.+.+|..+.+.+...... +..+|+-+.|++.+.++
T Consensus 64 ~~v~~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~ 100 (262)
T 2rcy_A 64 CAVKPDIAGSVLNNIKPYLSSKLLISICGGLNIGKLE 100 (262)
T ss_dssp ECSCTTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHH
T ss_pred EEeCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHH
Confidence 888888777777654332 44466666688876433
No 151
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.81 E-value=0.00012 Score=66.23 Aligned_cols=112 Identities=12% Similarity=0.150 Sum_probs=68.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhhcCcCCCCc--ceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~~~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
|+||+|+|+ |.||+.+++.+.+.. +.+++ ++|++. .....+. +.|+ ..++|++++++ ++|+||
T Consensus 6 ~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~~~------~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAGL-GLIGASLALGIKRDHPHYKIV-GYNRSD--RSRDIAL----ERGIVDEATADFKVFAA------LADVII 71 (290)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEE-EECSSH--HHHHHHH----HTTSCSEEESCTTTTGG------GCSEEE
T ss_pred cceEEEEee-CHHHHHHHHHHHhCCCCcEEE-EEcCCH--HHHHHHH----HcCCcccccCCHHHhhc------CCCEEE
Confidence 579999997 999999999887653 56754 567542 1122221 2333 34567777763 789999
Q ss_pred EcCCchhHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE
Q 022250 112 DFTDASTVYDNVKQATAF---GMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~---G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv 160 (300)
.+++|....+.+...... .-.+|+-+++......+.+.+...+.++.++
T Consensus 72 lavp~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v 123 (290)
T 3b1f_A 72 LAVPIKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFV 123 (290)
T ss_dssp ECSCHHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEE
T ss_pred EcCCHHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEE
Confidence 888888887777665543 1234543334333333556655543234443
No 152
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.80 E-value=0.00016 Score=66.65 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=78.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
|.||+++|. |+||..+++.+.+ .++++. ++|++. ..+..+. +.|....+++.++.+ .+|+||-+-
T Consensus 3 M~kIgfIGl-G~MG~~mA~~L~~-~G~~v~-v~dr~~--~~~~~l~----~~Ga~~a~s~~e~~~------~~dvv~~~l 67 (300)
T 3obb_A 3 MKQIAFIGL-GHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVISML 67 (300)
T ss_dssp CCEEEEECC-STTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEEECC
T ss_pred cCEEEEeee-hHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HcCCEEcCCHHHHHh------cCCceeecC
Confidence 469999997 9999999999885 578876 578653 2233333 356778889999984 789888543
Q ss_pred -CchhHHHHHHH---HH---HcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 115 -DASTVYDNVKQ---AT---AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 115 -~p~~~~~~~~~---al---~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
.++++.+.+.. .+ +.| .+||-++..+++...++.+.+++.|+..+=+|
T Consensus 68 ~~~~~v~~V~~~~~g~~~~~~~g-~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 68 PASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp SCHHHHHHHHHSSSSSTTSCCC--CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred CchHHHHHHHhchhhhhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 34444444422 11 223 35666666677888899999999998877666
No 153
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.80 E-value=0.00017 Score=70.10 Aligned_cols=126 Identities=12% Similarity=0.106 Sum_probs=73.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh-cCc---------------CCCCcceecCHHHH
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC-DME---------------QPLEIPVMSDLTMV 97 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~-g~~---------------~~~gv~v~~dl~~~ 97 (300)
|+|||+|+|+ |.||..++..+.+ .+++++ ++|.+. ..+..+. |.. ....+..++|++++
T Consensus 1 M~mkI~VIG~-G~vG~~lA~~La~-~G~~V~-~~D~~~--~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea 75 (450)
T 3gg2_A 1 MSLDIAVVGI-GYVGLVSATCFAE-LGANVR-CIDTDR--NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA 75 (450)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH
T ss_pred CCCEEEEECc-CHHHHHHHHHHHh-cCCEEE-EEECCH--HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHH
Confidence 4589999997 9999999998875 478877 467532 1111111 100 01235667899988
Q ss_pred HhcccccCCccEEEEcCCch----------hHHHHHHH---HHHcCCCEEEeCC---CCCHHHHHHHHHHhhh----CCC
Q 022250 98 LGSISQSKARAVVIDFTDAS----------TVYDNVKQ---ATAFGMRSVVYVP---HIQLETVSALSAFCDK----ASM 157 (300)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~----------~~~~~~~~---al~~G~~vVigTT---G~~~e~~~~L~~~a~~----~~i 157 (300)
++ ++|+||.+.++. .+.+.+.. .++.|.-||..+| |.+++-.+.+.+.... ...
T Consensus 76 ~~------~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~ 149 (450)
T 3gg2_A 76 VP------EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF 149 (450)
T ss_dssp GG------GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE
T ss_pred Hh------cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce
Confidence 74 789999776433 44444443 3445666666665 2222222223332111 237
Q ss_pred eEEEcCCCcHHHH
Q 022250 158 GCLIAPTLSIGSI 170 (300)
Q Consensus 158 ~iv~a~N~SiGv~ 170 (300)
+++++|.|.--.+
T Consensus 150 ~v~~~Pe~a~eG~ 162 (450)
T 3gg2_A 150 DIASNPEFLKEGN 162 (450)
T ss_dssp EEEECCCCCCTTS
T ss_pred eEEechhhhcccc
Confidence 8899999764433
No 154
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.80 E-value=5.7e-05 Score=65.00 Aligned_cols=120 Identities=10% Similarity=0.056 Sum_probs=70.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---cCc-CCCCcceecCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME-QPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
|||+|+|++|.||+.+++.+.+ .+++++. ++++. .....+. +.. ....+. .++++++++ ++|+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~-~g~~V~~-~~r~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLAT-LGHEIVV-GSRRE--EKAEAKAAEYRRIAGDASIT-GMKNEDAAE------ACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEE-EESSH--HHHHHHHHHHHHHHSSCCEE-EEEHHHHHH------HCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHHHHhccccccCCCC-hhhHHHHHh------cCCEEE
Confidence 5899999559999999998875 4678664 56532 1111111 100 001133 457777774 689999
Q ss_pred EcCCchhHHHHHHHHHH--cCCCEEEeCCCCCH-----------HHHHHHHHHhhhCCCeEEEc-CCCcHH
Q 022250 112 DFTDASTVYDNVKQATA--FGMRSVVYVPHIQL-----------ETVSALSAFCDKASMGCLIA-PTLSIG 168 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~--~G~~vVigTTG~~~-----------e~~~~L~~~a~~~~i~iv~a-~N~SiG 168 (300)
.++.+..+.+.+....+ .+..+|.-++|++. ...++|.+.... ..++.+ +|.+..
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~v~~~~~~~~~ 138 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--EKVVSALHTIPAA 138 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHTTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--SCEEECCTTCCHH
T ss_pred EeCChhhHHHHHHHHHHHcCCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--CeEEEEccchHHH
Confidence 99988776665543221 36666666677762 113455555432 566665 354443
No 155
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.78 E-value=5.5e-05 Score=70.87 Aligned_cols=121 Identities=15% Similarity=0.229 Sum_probs=72.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--c--------CcCCCCcceecCHHHHHhcccccC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--D--------MEQPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--g--------~~~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
+||+|+|+ |.||..++..+.+ .++++. ++|++. ..+..+. + ..-..++.+++|+++++ .
T Consensus 16 ~kI~iIG~-G~mG~~la~~L~~-~G~~V~-~~~r~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 84 (366)
T 1evy_A 16 NKAVVFGS-GAFGTALAMVLSK-KCREVC-VWHMNE--EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY------N 84 (366)
T ss_dssp EEEEEECC-SHHHHHHHHHHTT-TEEEEE-EECSCH--HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH------T
T ss_pred CeEEEECC-CHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHHHcCcccccccccccccceeeeCCHHHHH------c
Confidence 39999998 9999999998874 466655 466532 1111111 1 00011355667888877 3
Q ss_pred CccEEEEcCCchhHHHHHHH-------HHHc-CCCEEEeCCCCCHHHHHHHHHHhhhC-C---CeEEEcCCCcH
Q 022250 106 ARAVVIDFTDASTVYDNVKQ-------ATAF-GMRSVVYVPHIQLETVSALSAFCDKA-S---MGCLIAPTLSI 167 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~-------al~~-G~~vVigTTG~~~e~~~~L~~~a~~~-~---i~iv~a~N~Si 167 (300)
++|+||-+..+..+.+.+.. .+.. +..+|.-+.|++.+..+.+.+..++. + .+++..||+.-
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~ 158 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAI 158 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHH
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHH
Confidence 78999988877665555443 3445 77777666577654322233332221 2 46788899864
No 156
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.78 E-value=2.7e-05 Score=73.33 Aligned_cols=134 Identities=23% Similarity=0.177 Sum_probs=77.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhh--hcCc---CCCCcceec--C
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMV--CDME---QPLEIPVMS--D 93 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------------~~g~d~~~~--~g~~---~~~gv~v~~--d 93 (300)
|++||+|+|+ |++||.+.+++.+++++++|++-|.. ..|+--++. -+-. ....+.++. |
T Consensus 1 m~ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~d 79 (342)
T 2ep7_A 1 MAIKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKD 79 (342)
T ss_dssp --CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCC
Confidence 4689999999 99999999999888999999997741 112100000 0000 001133442 3
Q ss_pred HHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC----------CCCHHHHHHHHHHhhhCCCeEEEc
Q 022250 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP----------HIQLETVSALSAFCDKASMGCLIA 162 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT----------G~~~e~~~~L~~~a~~~~i~iv~a 162 (300)
.+++-- .+.++|+|+++|......+.+..+++.|.. ||+..+ |.+.+.++ .+ +..++
T Consensus 80 p~~~~w---~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~------~~-~~~II-- 147 (342)
T 2ep7_A 80 PSQIPW---GDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYN------PK-EHNII-- 147 (342)
T ss_dssp GGGCCH---HHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCC------TT-TCCEE--
T ss_pred hhhCCc---cccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhc------cc-CCeEE--
Confidence 333210 002689999888888888999999999975 454433 23333221 11 12344
Q ss_pred CCCcHHHHHHHHHHHHhc
Q 022250 163 PTLSIGSILLQQAAISAS 180 (300)
Q Consensus 163 ~N~SiGv~ll~~~a~~~~ 180 (300)
+|=|--.|-|.-+++.+-
T Consensus 148 SNasCTTn~Lap~lk~L~ 165 (342)
T 2ep7_A 148 SNASCTTNCLAPCVKVLN 165 (342)
T ss_dssp ECCCHHHHHHHHHHHHHH
T ss_pred ECCChHHHHHHHHHHHHH
Confidence 566666676666666654
No 157
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=97.78 E-value=0.00014 Score=69.09 Aligned_cols=92 Identities=15% Similarity=0.021 Sum_probs=66.0
Q ss_pred ceEEEEcCCchHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhhcCcCCCCccee--cCHHHHHhcccccCCccEE
Q 022250 36 IKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~-~i~~~~--~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DVV 110 (300)
|||+|+|+||-.|+.+++ .+.++| ..+++.+..+. .|+...++-|. ...+. ++.++ + .++|+|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~----~~~~~~~~~~~~-~------~~~Dvv 68 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD----AGMLHDAFDIES-L------KQLDAV 68 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC----CCBCEETTCHHH-H------TTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC----ceEEEecCChhH-h------ccCCEE
Confidence 689999999999999999 888887 68888765544 66655443321 12222 23444 3 379999
Q ss_pred EEcCCchhHHHHHHHHHHcCC-CEEEeCCC
Q 022250 111 IDFTDASTVYDNVKQATAFGM-RSVVYVPH 139 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~G~-~vVigTTG 139 (300)
+.++......+.+..+++.|. .+||-.++
T Consensus 69 f~a~~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 69 ITCQGGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred EECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 977777788999999999997 36665553
No 158
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=97.76 E-value=0.00013 Score=69.64 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=66.9
Q ss_pred cceEEEEcCCchHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhhcCcCCCCccee--cCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~-~i~~~~--~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DV 109 (300)
++||+|+|+||-.|+.+++ .+.++| ..+++.+..+ ..|+...++-|. ...+. ++.++ + .++|+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~----~~~v~~~~~~~~-~------~~vDv 71 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN----ETTLKDATSIDD-L------KKCDV 71 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS----CCBCEETTCHHH-H------HTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC----ceEEEeCCChhH-h------cCCCE
Confidence 5899999999999999999 888887 6888876554 566654444321 12222 23444 3 27899
Q ss_pred EEEcCCchhHHHHHHHHHHcCCC-EEEeCCC
Q 022250 110 VIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~G~~-vVigTTG 139 (300)
|+.++......+.+..+++.|+. +||-.++
T Consensus 72 vf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 72 IITCQGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 99777777889999999999973 6665553
No 159
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=97.73 E-value=6.8e-05 Score=70.67 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=67.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHH-HHHhcccccCCccEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT-MVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~-~~l~~~~~~~~~DVVID 112 (300)
+||+|+|+||-.|+.+++.+.++ |..+|+.+......|+... +.| ....+. +++ +.+ .++|+|+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~----~~~~~~-~~~~~~~------~~~Dvvf~ 69 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG----QEIEVE-DAETADP------SGLDIALF 69 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT----EEEEEE-ETTTSCC------TTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC----CceEEE-eCCHHHh------ccCCEEEE
Confidence 79999999999999999998887 8889988776666666544 221 112222 111 222 37899998
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCC
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTT 138 (300)
++......+.+..+++.|+.+|.-+.
T Consensus 70 a~~~~~s~~~a~~~~~~G~~vID~Sa 95 (344)
T 3tz6_A 70 SAGSAMSKVQAPRFAAAGVTVIDNSS 95 (344)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCChHHHHHHHHHHHhCCCEEEECCC
Confidence 88888889999999999998876554
No 160
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.73 E-value=0.00017 Score=70.50 Aligned_cols=122 Identities=12% Similarity=0.083 Sum_probs=75.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.++..+.+ .++++ .++|++. ..+..+.......++..++|++++++. ..++|+||.++
T Consensus 5 ~~~IgvIG~-G~mG~~lA~~L~~-~G~~V-~v~dr~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~---l~~aDvVilav 76 (474)
T 2iz1_A 5 QANFGVVGM-AVMGKNLALNVES-RGYTV-AIYNRTT--SKTEEVFKEHQDKNLVFTKTLEEFVGS---LEKPRRIMLMV 76 (474)
T ss_dssp TBSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSH--HHHHHHHHHTTTSCEEECSSHHHHHHT---BCSSCEEEECC
T ss_pred CCcEEEEee-HHHHHHHHHHHHh-CCCEE-EEEcCCH--HHHHHHHHhCcCCCeEEeCCHHHHHhh---ccCCCEEEEEc
Confidence 479999998 9999999999875 46765 4677642 122222210001256778899998751 02489999877
Q ss_pred Cch-hHHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 115 DAS-TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 115 ~p~-~~~~~~~~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
++. .+.+.+... ++.|..+|..+++.. ....++.+..++.++.++-+|++
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iiId~s~~~~-~~~~~l~~~l~~~g~~~v~~pv~ 130 (474)
T 2iz1_A 77 QAGAATDATIKSLLPLLDIGDILIDGGNTHF-PDTMRRNAELADSGINFIGTGVS 130 (474)
T ss_dssp CTTHHHHHHHHHHGGGCCTTCEEEECSCCCH-HHHHHHHHHTTTSSCEEEEEEEC
T ss_pred cCchHHHHHHHHHHhhCCCCCEEEECCCCCH-HHHHHHHHHHHHCCCeEECCCCC
Confidence 764 455555433 345666666666653 33455666666667766655654
No 161
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.72 E-value=0.00054 Score=61.50 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=62.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhhcCcCCCCcc--eecCHHHHHhcccccC-CccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEIP--VMSDLTMVLGSISQSK-ARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~~g~d~~~~~g~~~~~gv~--v~~dl~~~l~~~~~~~-~~DV 109 (300)
|+||+|+|+ |.||+.+++.+.+. ++ +++ ++|++. .....+ .+.|+. .++|+++++ . ++|+
T Consensus 1 m~~I~iIG~-G~mG~~~a~~l~~~-g~~~~V~-~~d~~~--~~~~~~----~~~g~~~~~~~~~~~~~------~~~aDv 65 (281)
T 2g5c_A 1 MQNVLIVGV-GFMGGSFAKSLRRS-GFKGKIY-GYDINP--ESISKA----VDLGIIDEGTTSIAKVE------DFSPDF 65 (281)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHT-TCCSEEE-EECSCH--HHHHHH----HHTTSCSEEESCGGGGG------GTCCSE
T ss_pred CcEEEEEec-CHHHHHHHHHHHhc-CCCcEEE-EEeCCH--HHHHHH----HHCCCcccccCCHHHHh------cCCCCE
Confidence 468999997 99999999988753 45 655 467542 111111 123432 356777776 4 7899
Q ss_pred EEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHh
Q 022250 110 VIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFC 152 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a 152 (300)
||.+++|....+.+..... .+. +|+-+++......+.+.+..
T Consensus 66 Vilavp~~~~~~v~~~l~~~l~~~~-iv~~~~~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 66 VMLSSPVRTFREIAKKLSYILSEDA-TVTDQGSVKGKLVYDLENIL 110 (281)
T ss_dssp EEECSCHHHHHHHHHHHHHHSCTTC-EEEECCSCCTHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHhhCCCCc-EEEECCCCcHHHHHHHHHhc
Confidence 9999988877776655433 344 44433333323334455443
No 162
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.72 E-value=2.9e-05 Score=72.09 Aligned_cols=123 Identities=12% Similarity=0.189 Sum_probs=72.4
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cCc-----CCCCcceecCHHHHHhcccccC
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME-----QPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--g~~-----~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
-|++||+|+|+ |.||..++..+.+ .+.++. +++++. ..+..+. |.. ...++.+++|+++ + .
T Consensus 12 ~~~~kI~iIG~-G~mG~ala~~L~~-~G~~V~-~~~r~~--~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~------~ 79 (335)
T 1z82_A 12 HMEMRFFVLGA-GSWGTVFAQMLHE-NGEEVI-LWARRK--EIVDLINVSHTSPYVEESKITVRATNDLEE-I------K 79 (335)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHHHHSCBTTBTTCCCCSEEESCGGG-C------C
T ss_pred ccCCcEEEECc-CHHHHHHHHHHHh-CCCeEE-EEeCCH--HHHHHHHHhCCcccCCCCeeeEEEeCCHHH-h------c
Confidence 36799999998 9999999998875 467754 566532 1111111 100 0013566778877 5 4
Q ss_pred CccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhh---CCCeEEEcCCCcH
Q 022250 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK---ASMGCLIAPTLSI 167 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~---~~i~iv~a~N~Si 167 (300)
++|+||-+..+..+.+.+......+..+|.-+.|++.++.+.+.+...+ ...+++..||+..
T Consensus 80 ~aDvVil~vk~~~~~~v~~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~ 144 (335)
T 1z82_A 80 KEDILVIAIPVQYIREHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAE 144 (335)
T ss_dssp TTEEEEECSCGGGHHHHHTTCSSCCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHH
T ss_pred CCCEEEEECCHHHHHHHHHHhCcCCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHH
Confidence 7899998887766666654322245556655557665332223322221 2357788899754
No 163
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.70 E-value=0.00016 Score=66.82 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=65.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC----cEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG----MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~----~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVV 110 (300)
+|||+|+|+ |.||..++..+.+. + .++. ++|++.....+..+. +.|+.+.++..+++. ++|+|
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~~~-G~~~~~~V~-v~~r~~~~~~~~~l~----~~G~~~~~~~~e~~~------~aDvV 88 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFTAA-GVLAAHKIM-ASSPDMDLATVSALR----KMGVKLTPHNKETVQ------HSDVL 88 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHHHT-TSSCGGGEE-EECSCTTSHHHHHHH----HHTCEEESCHHHHHH------HCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCCCcceEE-EECCCccHHHHHHHH----HcCCEEeCChHHHhc------cCCEE
Confidence 479999998 99999999988754 3 5554 566643101222221 346777778888774 68999
Q ss_pred EEcCCchhHHHHHHHHHHc---CCCEEEeCCCCCHHHH
Q 022250 111 IDFTDASTVYDNVKQATAF---GMRSVVYVPHIQLETV 145 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~~---G~~vVigTTG~~~e~~ 145 (300)
|-+..|..+.+.+...... +.-+|.-++|++.+++
T Consensus 89 ilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l 126 (322)
T 2izz_A 89 FLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSI 126 (322)
T ss_dssp EECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHH
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHH
Confidence 9898888887777654432 4434444468876543
No 164
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.69 E-value=0.00032 Score=61.10 Aligned_cols=94 Identities=14% Similarity=0.058 Sum_probs=59.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+++||+|+|+ |+||+.+++.+.+ .++++. ++|++. ..+..+. +.++.++ ++++++ .++|+||.+
T Consensus 27 ~~~~I~iiG~-G~~G~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~------~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGS-GDFARSLATRLVG-SGFKVV-VGSRNP--KRTARLF----PSAAQVT-FQEEAV------SSPEVIFVA 90 (215)
T ss_dssp --CCEEEECC-SHHHHHHHHHHHH-TTCCEE-EEESSH--HHHHHHS----BTTSEEE-EHHHHT------TSCSEEEEC
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCcee-cHHHHH------hCCCEEEEC
Confidence 3579999997 9999999998875 466765 466542 1222222 2355555 777777 379999988
Q ss_pred CCchhHHHHH--HHHHHcCCCEEEeCCCCCHHH
Q 022250 114 TDASTVYDNV--KQATAFGMRSVVYVPHIQLET 144 (300)
Q Consensus 114 T~p~~~~~~~--~~al~~G~~vVigTTG~~~e~ 144 (300)
+.+....+.+ ...+ .+..+|.-++|.+.+.
T Consensus 91 v~~~~~~~v~~l~~~~-~~~~vv~~s~g~~~~~ 122 (215)
T 2vns_A 91 VFREHYSSLCSLSDQL-AGKILVDVSNPTEQEH 122 (215)
T ss_dssp SCGGGSGGGGGGHHHH-TTCEEEECCCCCHHHH
T ss_pred CChHHHHHHHHHHHhc-CCCEEEEeCCCccccc
Confidence 8765433332 2233 5666666666876443
No 165
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.65 E-value=0.00033 Score=68.63 Aligned_cols=123 Identities=9% Similarity=0.050 Sum_probs=76.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-CcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
++||+|+|+ |.||+.++..+.+ .++++ .++|++. ..+..+.. .....++..+.|++++++.+ .++|+||-+
T Consensus 2 ~m~IgvIG~-G~mG~~lA~~La~-~G~~V-~v~dr~~--~~~~~l~~~~~~g~gi~~~~~~~e~v~~l---~~aDvVila 73 (482)
T 2pgd_A 2 QADIALIGL-AVMGQNLILNMND-HGFVV-CAFNRTV--SKVDDFLANEAKGTKVLGAHSLEEMVSKL---KKPRRIILL 73 (482)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHHB---CSSCEEEEC
T ss_pred CCeEEEECh-HHHHHHHHHHHHH-CCCeE-EEEeCCH--HHHHHHHhccccCCCeEEeCCHHHHHhhc---cCCCEEEEe
Confidence 368999997 9999999999875 46775 4677643 22222221 00004567788999887310 378999977
Q ss_pred CCch-hHHHHHHH---HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 114 TDAS-TVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 114 T~p~-~~~~~~~~---al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
.++. .+.+.+.. .++.|..+|..+++... ...++.+..++.++.++-.|++.
T Consensus 74 Vp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l~~~g~~~v~~pv~g 129 (482)
T 2pgd_A 74 VKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDLKDKGILFVGSGVSG 129 (482)
T ss_dssp SCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCChHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHcCCeEeCCCCCC
Confidence 7664 45555543 33456666666667643 33445555555667666566543
No 166
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.63 E-value=0.00028 Score=69.25 Aligned_cols=122 Identities=9% Similarity=0.035 Sum_probs=75.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.++..+.+ .+++++ ++|++. ..+..+.......|+..++|++++++. ..++|+||-..
T Consensus 15 ~~~IgvIGl-G~MG~~lA~~La~-~G~~V~-v~~r~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~---l~~aDvVil~V 86 (480)
T 2zyd_A 15 KQQIGVVGM-AVMGRNLALNIES-RGYTVS-IFNRSR--EKTEEVIAENPGKKLVPYYTVKEFVES---LETPRRILLMV 86 (480)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHT-TTCCEE-EECSSH--HHHHHHHHHSTTSCEEECSSHHHHHHT---BCSSCEEEECS
T ss_pred CCeEEEEcc-HHHHHHHHHHHHh-CCCeEE-EEeCCH--HHHHHHHhhCCCCCeEEeCCHHHHHhC---CCCCCEEEEEC
Confidence 678999998 9999999999875 577764 577642 222222210000257778899998751 02489999777
Q ss_pred Cc-hhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 115 DA-STVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 115 ~p-~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
++ ..+.+.+..... .|.-+|..+++... ...++.+..++.++..+-+|++
T Consensus 87 p~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 87 KAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp CSSSHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCeeCCccc
Confidence 66 356666654433 45556666677643 3344556555556666655553
No 167
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.62 E-value=0.00023 Score=69.67 Aligned_cols=122 Identities=11% Similarity=0.042 Sum_probs=72.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---cCc-CCCCcceecCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME-QPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
|||+|+|+ |.||+.++..+.+ .++++ .++|++. ..+..+. |.. ...++..++|++++++. ..++|+||
T Consensus 2 MkIgVIG~-G~mG~~lA~~La~-~G~~V-~v~dr~~--~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~---l~~aDvVi 73 (478)
T 1pgj_A 2 MDVGVVGL-GVMGANLALNIAE-KGFKV-AVFNRTY--SKSEEFMKANASAPFAGNLKAFETMEAFAAS---LKKPRKAL 73 (478)
T ss_dssp BSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSH--HHHHHHHHHTTTSTTGGGEEECSCHHHHHHH---BCSSCEEE
T ss_pred CEEEEECh-HHHHHHHHHHHHH-CCCEE-EEEeCCH--HHHHHHHHhcCCCCCCCCeEEECCHHHHHhc---ccCCCEEE
Confidence 58999997 9999999999875 46765 4677642 1122221 100 00125667899888741 02589999
Q ss_pred EcCCch-hHHHHHHH---HHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 112 DFTDAS-TVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 112 DfT~p~-~~~~~~~~---al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
.+.++. .+.+.+.. .++.|..+|..++|... ...++.+..++.++..+-+|+++
T Consensus 74 laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~-~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 74 ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFK-DQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHH-HHHHHHHHHHTTTCEEEEEEEES
T ss_pred EecCChHHHHHHHHHHHhhCCCCCEEEECCCCChH-HHHHHHHHHHHCCCeEEEeeccC
Confidence 877664 45555443 34456666666667643 33455555655566655455543
No 168
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.58 E-value=0.00015 Score=68.10 Aligned_cols=96 Identities=21% Similarity=0.200 Sum_probs=63.2
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhhh--c--Cc-CCCCcceec--C
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMVC--D--ME-QPLEIPVMS--D 93 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~-------------~~g~d~~~~~--g--~~-~~~gv~v~~--d 93 (300)
+||+|+|+ |++|+.+++++.++ |++||+++-|.. ..|+-.+++. + +. ....++++. |
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 58999999 99999999999988 999999988731 1121100000 0 00 001234442 4
Q ss_pred HHHH-HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEe
Q 022250 94 LTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (300)
Q Consensus 94 l~~~-l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVig 136 (300)
++++ .. +.++|+|+++|......+.+...++.|.. +||-
T Consensus 80 p~~l~w~----~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId 120 (332)
T 1hdg_O 80 PSKLPWK----DLGVDFVIESTGVFRNREKAELHLQAGAKKVIIT 120 (332)
T ss_dssp GGGSCHH----HHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEES
T ss_pred hHHCccc----ccCCCEEEECCccchhHHHHHHHHHcCCcEEEEe
Confidence 4443 11 02689999999888889999999999973 4443
No 169
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.57 E-value=0.00081 Score=65.18 Aligned_cols=116 Identities=16% Similarity=0.218 Sum_probs=69.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh-cCc-------------CCCCcceecCHHHHHhc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC-DME-------------QPLEIPVMSDLTMVLGS 100 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~-g~~-------------~~~gv~v~~dl~~~l~~ 100 (300)
+|||+|+|+ |.||..++..+.+ ++++++ +|.+. ..+..+. |.. ...++..++|++++++
T Consensus 36 ~mkIaVIGl-G~mG~~lA~~La~--G~~V~~-~D~~~--~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~- 108 (432)
T 3pid_A 36 FMKITISGT-GYVGLSNGVLIAQ--NHEVVA-LDIVQ--AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR- 108 (432)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHT--TSEEEE-ECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT-
T ss_pred CCEEEEECc-CHHHHHHHHHHHc--CCeEEE-EecCH--HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh-
Confidence 589999997 9999999998774 888775 67532 1111111 000 0124667789988884
Q ss_pred ccccCCccEEEEcCCch-----------hHHHHHHHH--HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 101 ISQSKARAVVIDFTDAS-----------TVYDNVKQA--TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 101 ~~~~~~~DVVIDfT~p~-----------~~~~~~~~a--l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
++|+||.+++.. .+.+.++.. ++.|.-+|..+| ..+...+++.+...+ ..++++|-|
T Consensus 109 -----~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~ST-v~pgtt~~l~~~l~~--~~v~~sPe~ 178 (432)
T 3pid_A 109 -----NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKST-IPVGFTRDIKERLGI--DNVIFSPEF 178 (432)
T ss_dssp -----TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSC-CCTTHHHHHHHHHTC--CCEEECCCC
T ss_pred -----CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCC-CChHHHHHHHHHHhh--ccEeecCcc
Confidence 789999876432 233222222 555665665555 222333445555554 367889987
No 170
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.00064 Score=66.98 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=75.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-CcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
|..||+|+|+ |.||+.++..+.+ .+++++ ++|++. ..+..+.. .....++..++|++++++. ..++|+||-
T Consensus 9 ~~~~IgvIGl-G~MG~~lA~~La~-~G~~V~-v~dr~~--~~~~~l~~~~~~~~gi~~~~s~~e~v~~---l~~aDvVil 80 (497)
T 2p4q_A 9 MSADFGLIGL-AVMGQNLILNAAD-HGFTVC-AYNRTQ--SKVDHFLANEAKGKSIIGATSIEDFISK---LKRPRKVML 80 (497)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSSS--HHHHHHHHTTTTTSSEECCSSHHHHHHT---SCSSCEEEE
T ss_pred CCCCEEEEee-HHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHcccccCCCeEEeCCHHHHHhc---CCCCCEEEE
Confidence 4578999997 9999999999875 477764 677653 22222321 0000467777899998751 024899997
Q ss_pred cCCc-hhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 113 FTDA-STVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 113 fT~p-~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
..++ ..+.+.+..... .|.-+|..+++... ...++.+..++.++..+-+|
T Consensus 81 ~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~-~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 81 LVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFP-DSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp CCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEE
T ss_pred EcCChHHHHHHHHHHHHhCCCCCEEEECCCCChh-HHHHHHHHHHHcCCceeCCC
Confidence 7766 355666654433 35556656666543 34455555555666655444
No 171
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.55 E-value=0.00059 Score=63.14 Aligned_cols=103 Identities=16% Similarity=0.127 Sum_probs=64.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhhcCcCCCCc--ceecCHHH-HHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTM-VLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~~g~d~~~~~g~~~~~gv--~v~~dl~~-~l~~~~~~~~~DV 109 (300)
++||+|+|+ |.||+.+++.+.+ .++ +++ ++|++. ....... +.|+ ..++|+++ ++ .++|+
T Consensus 33 ~~kI~IIG~-G~mG~slA~~l~~-~G~~~~V~-~~dr~~--~~~~~a~----~~G~~~~~~~~~~~~~~------~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGV-GFMGGSFAKSLRR-SGFKGKIY-GYDINP--ESISKAV----DLGIIDEGTTSIAKVED------FSPDF 97 (314)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHH-TTCCSEEE-EECSCH--HHHHHHH----HTTSCSEEESCTTGGGG------GCCSE
T ss_pred CCEEEEEee-CHHHHHHHHHHHh-CCCCCEEE-EEECCH--HHHHHHH----HCCCcchhcCCHHHHhh------ccCCE
Confidence 479999997 9999999998875 455 665 467642 1111111 2343 34678887 66 37999
Q ss_pred EEEcCCchhHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHHh
Q 022250 110 VIDFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAFC 152 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~~--G~~vVigTTG~~~e~~~~L~~~a 152 (300)
||.++++....+.+...... .-.+|+-.++......+.+.+..
T Consensus 98 Vilavp~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 98 VMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp EEECSCGGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc
Confidence 99999888877776655442 12355444444333344555443
No 172
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=97.55 E-value=0.0002 Score=67.19 Aligned_cols=98 Identities=21% Similarity=0.187 Sum_probs=62.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc---CCcEEEEEEecC-------------CCCcchhh--hhcCc---CCCCcceec-
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA---RGMEVAGAIDSH-------------SVGEDIGM--VCDME---QPLEIPVMS- 92 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~---~~~eLvg~vd~~-------------~~g~d~~~--~~g~~---~~~gv~v~~- 92 (300)
|+||+|+|+ |++||.+.+++.++ +++|+|++-|.. ..|+--++ +-|-. ....+.++.
T Consensus 1 ~ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 1 TIRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEc
Confidence 479999999 99999999999888 899999998731 11110000 00000 001233432
Q ss_pred -CHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEe
Q 022250 93 -DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (300)
Q Consensus 93 -dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVig 136 (300)
|++++-= .+.++|+|+++|......+.+..++++|.. ||+.
T Consensus 80 ~dp~~~~w---~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviS 122 (335)
T 1obf_O 80 RNPAQLPW---GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIIS 122 (335)
T ss_dssp SCGGGSCT---TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEES
T ss_pred CCcccCCc---cccCCCEEEEccCccccHHHHHHHHHcCCCEEEEC
Confidence 4443310 013789999888878888889999999975 4553
No 173
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.54 E-value=0.00013 Score=68.70 Aligned_cols=124 Identities=16% Similarity=0.203 Sum_probs=71.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhhhh----------cCcCCCCcceecC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGMVC----------DMEQPLEIPVMSD 93 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-------~eLvg~vd~~~~--g~-d~~~~~----------g~~~~~gv~v~~d 93 (300)
||+||+|+|+ |.||..++..+.+. + .++. +++++.. ++ .+..+. |..-+.++..++|
T Consensus 20 ~~~kI~iIGa-G~mG~alA~~L~~~-G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 20 GPLKISILGS-GNWASAISKVVGTN-AKNNYLFENEVR-MWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp SCBCEEEECC-SHHHHHHHHHHHHH-HHHCTTBCSCEE-EECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHc-CCccCCCCCeEE-EEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 5689999998 99999999988753 3 5544 4565421 00 111111 1000124566778
Q ss_pred HHHHHhcccccCCccEEEEcCCchhHHHHHHHHHH-------cCCCEEEeCCCCCH-----HHHHH-HHHHhhhCCCeEE
Q 022250 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATA-------FGMRSVVYVPHIQL-----ETVSA-LSAFCDKASMGCL 160 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~-------~G~~vVigTTG~~~-----e~~~~-L~~~a~~~~i~iv 160 (300)
+++++ .++|+||-+.++..+.+.+..... .+..+|.-+.|++. +...+ +.+..- ...+++
T Consensus 97 ~~ea~------~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~-~~~~v~ 169 (375)
T 1yj8_A 97 LASVI------NDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN-IPCSAL 169 (375)
T ss_dssp THHHH------TTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS-SCEEEE
T ss_pred HHHHH------cCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC-CCEEEE
Confidence 88877 378999988777666666654433 24445555557654 12222 222211 236778
Q ss_pred EcCCCcH
Q 022250 161 IAPTLSI 167 (300)
Q Consensus 161 ~a~N~Si 167 (300)
..||+..
T Consensus 170 ~gp~~a~ 176 (375)
T 1yj8_A 170 SGANIAM 176 (375)
T ss_dssp ECSCCHH
T ss_pred eCCchHH
Confidence 8899865
No 174
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=97.52 E-value=0.00026 Score=66.37 Aligned_cols=154 Identities=20% Similarity=0.207 Sum_probs=91.0
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC-------------CCcchhhhh--cCc---CCCCccee--c
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------------VGEDIGMVC--DME---QPLEIPVM--S 92 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-------------~g~d~~~~~--g~~---~~~gv~v~--~ 92 (300)
+|++||+|+|. ||+||.+.+++.+.+++|+|++-|... .|+=-+++. |-. ....++++ .
T Consensus 2 ~m~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 2 SMAVKVAINGF-GRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEP 80 (338)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CccEEEEEECC-CcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEec
Confidence 57899999998 999999999998888999999876210 011000000 000 00123343 3
Q ss_pred CHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC----------CCCHHHHHHHHHHhhhCCCeEEE
Q 022250 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP----------HIQLETVSALSAFCDKASMGCLI 161 (300)
Q Consensus 93 dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT----------G~~~e~~~~L~~~a~~~~i~iv~ 161 (300)
|++++-= .+..+|+|++.|-.....+.+...++.|.. |||..| |.+.+.++ .+ -.++
T Consensus 81 dp~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~------~~--~~II- 148 (338)
T 3lvf_P 81 DASKLPW---KDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELD------GS--ETVV- 148 (338)
T ss_dssp CGGGSCT---TTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCC------SC--CSEE-
T ss_pred ccccCCc---cccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcC------cc--CCeE-
Confidence 4444310 024789999988888888999999999965 455433 23333321 12 2444
Q ss_pred cCCCcHHHHHHHHHHHHhccCCCCeE---EEEccC----C-CCCCCch
Q 022250 162 APTLSIGSILLQQAAISASFHYKNVE---IVESRP----N-ARDFPSP 201 (300)
Q Consensus 162 a~N~SiGv~ll~~~a~~~~~~~~die---IiE~Hh----~-K~DaPSG 201 (300)
+|=|--.|-|.-+++.+-.. |.|+ +.-.|- + -.|.|++
T Consensus 149 -SNasCTTn~Lap~lkvL~d~-fGI~~g~mTTvha~T~~q~~~D~~~~ 194 (338)
T 3lvf_P 149 -SGASCTTNSLAPVAKVLNDD-FGLVEGLMTTIHAYTGDQNTQDAPHR 194 (338)
T ss_dssp -ECCCHHHHHHHHHHHHHHHH-HCEEEEEEEEEEECCTTSCSSSCCCT
T ss_pred -ecCchhhhhhHHHHHHHHHh-cCEEEEEEeeeccccchhhhhcCCcc
Confidence 66666677666666666432 3333 233363 2 3688987
No 175
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.50 E-value=0.00097 Score=65.26 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=46.8
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhh-cCc--------------CCCCcceecCH
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVC-DME--------------QPLEIPVMSDL 94 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~-g~~--------------~~~gv~v~~dl 94 (300)
++.|||||+|+|+ |.||..++..+.+. +++++++ +|.+. ..+..+. |.. ...++..++|+
T Consensus 5 ~~~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~-~D~~~--~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~ 80 (481)
T 2o3j_A 5 VFGKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTV-VDMNT--AKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDI 80 (481)
T ss_dssp SSCCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCH
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCH
Confidence 3345689999997 99999999988865 3788775 66431 1111111 000 01134556787
Q ss_pred HHHHhcccccCCccEEEEcC
Q 022250 95 TMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 95 ~~~l~~~~~~~~~DVVIDfT 114 (300)
++++. ++|+||.+.
T Consensus 81 ~~~~~------~aDvvii~V 94 (481)
T 2o3j_A 81 PKAIA------EADLIFISV 94 (481)
T ss_dssp HHHHH------HCSEEEECC
T ss_pred HHHhh------cCCEEEEec
Confidence 77764 689999774
No 176
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.44 E-value=0.00086 Score=59.44 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=58.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc--------------hhhhhcCcCCCCcceecCHHHHHh
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED--------------IGMVCDMEQPLEIPVMSDLTMVLG 99 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d--------------~~~~~g~~~~~gv~v~~dl~~~l~ 99 (300)
+++||+|+|+ |.||+.+++.+.+ .++++. ++|++. .. ...+. ...+...+.|++++++
T Consensus 18 ~~~kIgiIG~-G~mG~alA~~L~~-~G~~V~-~~~r~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~ 89 (245)
T 3dtt_A 18 QGMKIAVLGT-GTVGRTMAGALAD-LGHEVT-IGTRDP--KATLARAEPDAMGAPPFSQWL---PEHPHVHLAAFADVAA 89 (245)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESCH--HHHHTCC-------CCHHHHG---GGSTTCEEEEHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHH-CCCEEE-EEeCCh--hhhhhhhhhhhhcchhhhHHH---hhcCceeccCHHHHHh
Confidence 4689999997 9999999999875 477866 467542 11 12222 1234445678888874
Q ss_pred cccccCCccEEEEcCCchhHHHHHHHH---HHcCCCEEEeC
Q 022250 100 SISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYV 137 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigT 137 (300)
++|+||-+.++....+.+... .-.|.-+|..+
T Consensus 90 ------~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s 124 (245)
T 3dtt_A 90 ------GAELVVNATEGASSIAALTAAGAENLAGKILVDIA 124 (245)
T ss_dssp ------HCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECC
T ss_pred ------cCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECC
Confidence 689999888887766655432 11566555555
No 177
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.43 E-value=0.00084 Score=60.11 Aligned_cols=99 Identities=13% Similarity=0.201 Sum_probs=63.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc--ceecCHHHHHhcccccCCccEEEEc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|||+|+|+ |.||+.+++.+.+ .+++++. +|++. .....+. +.|+ ..+++++++ . ++|+||.+
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~~~~--~~~~~~~----~~g~~~~~~~~~~~~-~------~~D~vi~a 64 (279)
T 2f1k_A 1 MKIGVVGL-GLIGASLAGDLRR-RGHYLIG-VSRQQ--STCEKAV----ERQLVDEAGQDLSLL-Q------TAKIIFLC 64 (279)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHH----HTTSCSEEESCGGGG-T------TCSEEEEC
T ss_pred CEEEEEcC-cHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH----hCCCCccccCCHHHh-C------CCCEEEEE
Confidence 58999997 9999999998875 4677654 56542 1122221 2333 246677776 4 68999989
Q ss_pred CCchhHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHH
Q 022250 114 TDASTVYDNVKQATAF---GMRSVVYVPHIQLETVSALSAF 151 (300)
Q Consensus 114 T~p~~~~~~~~~al~~---G~~vVigTTG~~~e~~~~L~~~ 151 (300)
++|..+.+.+...... +. +|+-+.+.+....+.+.+.
T Consensus 65 v~~~~~~~~~~~l~~~~~~~~-~vv~~~~~~~~~~~~~~~~ 104 (279)
T 2f1k_A 65 TPIQLILPTLEKLIPHLSPTA-IVTDVASVKTAIAEPASQL 104 (279)
T ss_dssp SCHHHHHHHHHHHGGGSCTTC-EEEECCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCC-EEEECCCCcHHHHHHHHHH
Confidence 8888777777655432 33 4554555665555555444
No 178
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.42 E-value=0.00049 Score=63.60 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=58.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---cCc---C----CCCc-ceecCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DME---Q----PLEI-PVMSDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---g~~---~----~~gv-~v~~dl~~~l~~~~~ 103 (300)
+|||+|+|+ |.||+.++..+.+ .++++. ++|++. ..+..+. +.. . ...+ ..++|+++++
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~-~g~~V~-~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 73 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLAL-KGQSVL-AWDIDA--QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----- 73 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----
T ss_pred cCeEEEECC-CHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHHhcCCeEEeccccccccccceecCCHHHHH-----
Confidence 479999998 9999999998875 467754 566532 1111111 100 0 0011 2567888877
Q ss_pred cCCccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCC
Q 022250 104 SKARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPH 139 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG 139 (300)
.++|+||.++++..+.+.+.... +.+..+|+. .|
T Consensus 74 -~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 74 -KDADVILIVVPAIHHASIAANIASYISEGQLIILN-PG 110 (359)
T ss_dssp -TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES-SC
T ss_pred -hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc-CC
Confidence 37999998888877777666553 345656655 55
No 179
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.39 E-value=0.0005 Score=59.08 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=28.4
Q ss_pred Ccce-EEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 34 SNIK-VIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 34 ~~ik-V~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|||| |.|.|++|.+|+.+++.+.+.+++++++..
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~ 37 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYG 37 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEe
Confidence 3556 999999999999999998855788887654
No 180
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.38 E-value=0.0011 Score=64.38 Aligned_cols=125 Identities=12% Similarity=0.159 Sum_probs=74.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh-cCc---------------CCCCcceecCHHHHH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC-DME---------------QPLEIPVMSDLTMVL 98 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~-g~~---------------~~~gv~v~~dl~~~l 98 (300)
.+||+|+|. |.||..++..+.+ .++++++ +|.+. ..+..+. |.. .+..+..++|+++++
T Consensus 8 ~~~~~vIGl-G~vG~~~A~~La~-~G~~V~~-~D~~~--~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 8 SVRIAMIGT-GYVGLVSGACFSD-FGHEVVC-VDKDA--RKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCS--TTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred ceEEEEEcC-CHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH
Confidence 489999997 9999999998875 5888775 66542 1122111 100 012356678998887
Q ss_pred hcccccCCccEEEEc--CCch---------hHHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHhhh----CCCeEE
Q 022250 99 GSISQSKARAVVIDF--TDAS---------TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDK----ASMGCL 160 (300)
Q Consensus 99 ~~~~~~~~~DVVIDf--T~p~---------~~~~~~~~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~----~~i~iv 160 (300)
+ ++|++|.+ |+++ .+.+.++.. ++.|.-+|..+| ..+...+++.+..++ ...+++
T Consensus 83 ~------~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST-v~pgtt~~l~~~l~e~~~~~d~~v~ 155 (446)
T 4a7p_A 83 K------DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST-VPVGTGDEVERIIAEVAPNSGAKVV 155 (446)
T ss_dssp T------TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC-CCTTHHHHHHHHHHHHSTTSCCEEE
T ss_pred h------cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC-CCchHHHHHHHHHHHhCCCCCceEE
Confidence 4 78999977 4432 244444433 345555666554 333333333333322 358999
Q ss_pred EcCCCcHHHHH
Q 022250 161 IAPTLSIGSIL 171 (300)
Q Consensus 161 ~a~N~SiGv~l 171 (300)
.+|+|.--.+.
T Consensus 156 ~~Pe~a~eG~a 166 (446)
T 4a7p_A 156 SNPEFLREGAA 166 (446)
T ss_dssp ECCCCCCTTSH
T ss_pred eCcccccccch
Confidence 99998754443
No 181
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00058 Score=65.38 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=76.4
Q ss_pred EeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCC----c--EEEEEEecC--CCCc-----------chhhhhcCcCCC
Q 022250 26 SCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG----M--EVAGAIDSH--SVGE-----------DIGMVCDMEQPL 86 (300)
Q Consensus 26 ~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~----~--eLvg~vd~~--~~g~-----------d~~~~~g~~~~~ 86 (300)
+++..+.+.++||+|+|+ |.+|.+++..+.+.-. . .-|-.+.++ ..++ +...+-|..-+-
T Consensus 25 ~~~~~~~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~ 103 (391)
T 4fgw_A 25 SVSLKAAEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPD 103 (391)
T ss_dssp --------CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCS
T ss_pred cccccccCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCC
Confidence 344444455789999998 9999999998875311 0 123333322 1111 111222332334
Q ss_pred CcceecCHHHHHhcccccCCccEEEEcCCchhHHHHHHHH---HHcCCCEEEeCCCCCH--H---HH-HHHHHHhhhCCC
Q 022250 87 EIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQL--E---TV-SALSAFCDKASM 157 (300)
Q Consensus 87 gv~v~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigTTG~~~--e---~~-~~L~~~a~~~~i 157 (300)
++.+++|++++++ ++|+||-..+.....+.+... +..++++|..+-|+.. . -+ +.+.+.-. ..+
T Consensus 104 ~i~~t~dl~~al~------~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~-~~~ 176 (391)
T 4fgw_A 104 NLVANPDLIDSVK------DVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELG-IQC 176 (391)
T ss_dssp SEEEESCHHHHHT------TCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHC-CEE
T ss_pred CcEEeCCHHHHHh------cCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhC-ccc
Confidence 5777899999984 789998555555555665554 3456778888778741 1 11 22333221 236
Q ss_pred eEEEcCCCcHHH
Q 022250 158 GCLIAPTLSIGS 169 (300)
Q Consensus 158 ~iv~a~N~SiGv 169 (300)
.++-.|||+-=|
T Consensus 177 ~vLsGPs~A~EV 188 (391)
T 4fgw_A 177 GALSGANIATEV 188 (391)
T ss_dssp EEEECSCCHHHH
T ss_pred eeccCCchHHHh
Confidence 678889998665
No 182
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=97.36 E-value=0.00034 Score=65.74 Aligned_cols=135 Identities=18% Similarity=0.158 Sum_probs=79.9
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC-------------CCcchhhhh--cCc---CCCCccee--c
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------------VGEDIGMVC--DME---QPLEIPVM--S 92 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-------------~g~d~~~~~--g~~---~~~gv~v~--~ 92 (300)
++|+||+|+|. ||+||.+.+++.+.+++|+|++-|+.. .|+=-+++. |-. ....++++ .
T Consensus 2 ~~~~kv~INGf-GrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 2 NAMTRVAINGF-GRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCS
T ss_pred CccEEEEEECC-CcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecC
Confidence 45799999998 999999999998888999999877411 010000000 000 00123343 3
Q ss_pred CHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC----------CCCHHHHHHHHHHhhhCCCeEEE
Q 022250 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP----------HIQLETVSALSAFCDKASMGCLI 161 (300)
Q Consensus 93 dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT----------G~~~e~~~~L~~~a~~~~i~iv~ 161 (300)
|++++-= .+.++|+|++.|-.....+.+...++.|.. |||..| |.+.+.++ . .+ -.++
T Consensus 81 dp~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~---~--~~--~~II- 149 (345)
T 4dib_A 81 DPKELPW---TDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLD---I--TK--HTVI- 149 (345)
T ss_dssp CGGGSCT---TTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCC---T--TT--CSEE-
T ss_pred ChhhCCc---cccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcC---c--cc--CeEE-
Confidence 4444310 024789999988887888899999999965 555443 22332211 0 01 2344
Q ss_pred cCCCcHHHHHHHHHHHHhc
Q 022250 162 APTLSIGSILLQQAAISAS 180 (300)
Q Consensus 162 a~N~SiGv~ll~~~a~~~~ 180 (300)
+|=|--.|-|.-+++.+-
T Consensus 150 -SNaSCTTn~Lap~lkvL~ 167 (345)
T 4dib_A 150 -SNASCTTNCLAPVVKVLD 167 (345)
T ss_dssp -ECCCHHHHHHHHHHHHHH
T ss_pred -ECCchhhhhhHHHHHHHH
Confidence 666777776666666654
No 183
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.36 E-value=0.00023 Score=63.16 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=61.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
|||+|+|+ |.||+.++..+.+. + .++ .++|++. ..+..+. ..+|+.+++|+++++ ++|+||.++
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~-g~~~v-~~~~r~~--~~~~~~~---~~~g~~~~~~~~~~~-------~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGG-GNMAAAVAGGLVKQ-GGYRI-YIANRGA--EKRERLE---KELGVETSATLPELH-------SDDVLILAV 65 (263)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-CSCEE-EEECSSH--HHHHHHH---HHTCCEEESSCCCCC-------TTSEEEECS
T ss_pred CEEEEECc-hHHHHHHHHHHHHC-CCCeE-EEECCCH--HHHHHHH---HhcCCEEeCCHHHHh-------cCCEEEEEe
Confidence 58999998 99999999988754 4 554 4577542 1222222 124666666665542 579999888
Q ss_pred CchhHHHHHHHHHHcCCCEEEeC-CCCCHHHHHHHHHHhhh
Q 022250 115 DASTVYDNVKQATAFGMRSVVYV-PHIQLETVSALSAFCDK 154 (300)
Q Consensus 115 ~p~~~~~~~~~al~~G~~vVigT-TG~~~e~~~~L~~~a~~ 154 (300)
+|..+.+.+......+. +|+-. .|++.+ .|.+...+
T Consensus 66 ~~~~~~~v~~~l~~~~~-ivv~~~~g~~~~---~l~~~~~~ 102 (263)
T 1yqg_A 66 KPQDMEAACKNIRTNGA-LVLSVAAGLSVG---TLSRYLGG 102 (263)
T ss_dssp CHHHHHHHHTTCCCTTC-EEEECCTTCCHH---HHHHHTTS
T ss_pred CchhHHHHHHHhccCCC-EEEEecCCCCHH---HHHHHcCC
Confidence 87766665543221244 44444 588764 45555443
No 184
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.34 E-value=0.00062 Score=58.43 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=28.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+|+||.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r 36 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALN-RGFEVTAVVR 36 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHT-TTCEEEEECS
T ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEEc
Confidence 368999999999999999999885 4688877543
No 185
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.34 E-value=0.00093 Score=62.73 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=65.4
Q ss_pred eecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 27 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 27 ~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
|+..|. +.||+|+|+ |.||..+++.+.+. +++++ ++|++. ...... .+.|+..++|+++++... ..+
T Consensus 2 m~~~~~--~~kIgIIG~-G~mG~slA~~L~~~-G~~V~-~~dr~~--~~~~~a----~~~G~~~~~~~~e~~~~a--~~~ 68 (341)
T 3ktd_A 2 MTTKDI--SRPVCILGL-GLIGGSLLRDLHAA-NHSVF-GYNRSR--SGAKSA----VDEGFDVSADLEATLQRA--AAE 68 (341)
T ss_dssp ----CC--SSCEEEECC-SHHHHHHHHHHHHT-TCCEE-EECSCH--HHHHHH----HHTTCCEESCHHHHHHHH--HHT
T ss_pred CCccCC--CCEEEEEee-cHHHHHHHHHHHHC-CCEEE-EEeCCH--HHHHHH----HHcCCeeeCCHHHHHHhc--ccC
Confidence 344554 468999997 99999999998754 67765 467542 111111 235666678888877410 014
Q ss_pred ccEEEEcCCchhHHHHHHHHHHcCC-CEEEeCCCCCHHHHHHHHH
Q 022250 107 RAVVIDFTDASTVYDNVKQATAFGM-RSVVYVPHIQLETVSALSA 150 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al~~G~-~vVigTTG~~~e~~~~L~~ 150 (300)
+|+||-.+++....+.+........ .+|+-.++...+-.+.+.+
T Consensus 69 aDlVilavP~~~~~~vl~~l~~~~~~~iv~Dv~Svk~~i~~~~~~ 113 (341)
T 3ktd_A 69 DALIVLAVPMTAIDSLLDAVHTHAPNNGFTDVVSVKTAVYDAVKA 113 (341)
T ss_dssp TCEEEECSCHHHHHHHHHHHHHHCTTCCEEECCSCSHHHHHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHccCCCCEEEEcCCCChHHHHHHHH
Confidence 7999988888777766655443322 2443344444443444443
No 186
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.33 E-value=0.0021 Score=53.84 Aligned_cols=132 Identities=13% Similarity=0.047 Sum_probs=74.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-e---cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVV 110 (300)
..+|+|+|+ |+||+.+++.+.+..+++++ ++|++. .....+. +.|+.+ + ++.+.+.+ ...-.++|+|
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~-vid~~~--~~~~~~~----~~g~~~~~gd~~~~~~l~~-~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISL-GIEIRE--EAAQQHR----SEGRNVISGDATDPDFWER-ILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEE-EEESCH--HHHHHHH----HTTCCEEECCTTCHHHHHT-BCSCCCCCEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEE-EEECCH--HHHHHHH----HCCCCEEEcCCCCHHHHHh-ccCCCCCCEE
Confidence 468999998 99999999988753266766 456542 1122211 223332 2 23332211 0001468999
Q ss_pred EEcCCchhH-HHHHHHHHHcC-CCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHhc
Q 022250 111 IDFTDASTV-YDNVKQATAFG-MRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS 180 (300)
Q Consensus 111 IDfT~p~~~-~~~~~~al~~G-~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~ 180 (300)
|.++..+.. ...+..+.+.+ ...|+..+ -+++..+.+ ++.|+..+++|....|-.+...+.+.+.
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~~~~l----~~~G~~~vi~p~~~~a~~l~~~~~~~~~ 176 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQLQRRNYKGQIAAIA-EYPDQLEGL----LESGVDAAFNIYSEAGSGFARHVCKQLE 176 (183)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCSEEEEEE-SSHHHHHHH----HHHTCSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred EEeCCChHHHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHH----HHcCCCEEEchHHHHHHHHHHHHHHhcC
Confidence 987764443 44445555555 33333332 234443333 3346778888988888777777776654
No 187
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.32 E-value=0.0018 Score=59.98 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=71.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhhhh----------cCcCCCCcceecCH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGMVC----------DMEQPLEIPVMSDL 94 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-------~eLvg~vd~~~~--g~-d~~~~~----------g~~~~~gv~v~~dl 94 (300)
++||+|+|+ |.||..++..+.+. + .++ -+++++.. ++ ....+. |..-..++..++|+
T Consensus 8 ~mkI~iIG~-G~mG~~~a~~l~~~-g~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVGS-GNWGSAIAKIVGGN-AAQLAQFDPRV-TMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHH-HHHCTTEEEEE-EEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEECC-CHHHHHHHHHHHhc-CCcccCCCCeE-EEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCH
Confidence 479999998 99999999988753 3 554 45665421 00 111111 00001234556788
Q ss_pred HHHHhcccccCCccEEEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCH-----HHH-HHHHHHhhhCCCeEEEcCCC
Q 022250 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL-----ETV-SALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 95 ~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~-----e~~-~~L~~~a~~~~i~iv~a~N~ 165 (300)
++++ .++|+||-++++....+.+..... .+..+|.-++|++. +.+ +.+.+..- ...+++..||+
T Consensus 85 ~~~~------~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~-~~~~v~~gp~~ 157 (354)
T 1x0v_A 85 VQAA------EDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG-IPMSVLMGANI 157 (354)
T ss_dssp HHHH------TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT-CCEEEEECSCC
T ss_pred HHHH------cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC-CCEEEEECCCc
Confidence 8877 379999988877766666654433 34556655667652 122 22332211 23567888998
Q ss_pred cH
Q 022250 166 SI 167 (300)
Q Consensus 166 Si 167 (300)
+-
T Consensus 158 a~ 159 (354)
T 1x0v_A 158 AS 159 (354)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 188
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=97.30 E-value=0.00048 Score=64.54 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=80.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc--CCcEEEEEEecCC-------------CCcchhhhh--c----CcCCCCccee-
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHS-------------VGEDIGMVC--D----MEQPLEIPVM- 91 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~-------------~g~d~~~~~--g----~~~~~gv~v~- 91 (300)
|++||+|+|. ||+||.+.+++.+. +++|+|++-|+.. .|+=-+++. | . ....++++
T Consensus 1 m~~kv~INGf-GrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i-~Gk~I~v~~ 78 (335)
T 3doc_A 1 MAVRVAINGF-GRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDV-GYGPIKVHA 78 (335)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEES-SSSEEEEEC
T ss_pred CCEEEEEECC-CcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEE-CCEEEEEEe
Confidence 6799999998 99999999998876 6899999877411 011000000 0 0 00123343
Q ss_pred -cCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCCC----------CCHHHHHHHHHHhhhCCCeE
Q 022250 92 -SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH----------IQLETVSALSAFCDKASMGC 159 (300)
Q Consensus 92 -~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTTG----------~~~e~~~~L~~~a~~~~i~i 159 (300)
.|++++-= .+.++|+|++.|-.....+.+...++.|.. |||..|. .+.+.++ .+ -.+
T Consensus 79 e~dp~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~------~~--~~I 147 (335)
T 3doc_A 79 VRNPAELPW---KEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLT------KD--HLV 147 (335)
T ss_dssp CSSTTSSCT---TTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCC------TT--CCE
T ss_pred ecccccccc---cccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhC------cc--CCe
Confidence 23333210 024789999988877788899999999964 5554442 2332211 11 234
Q ss_pred EEcCCCcHHHHHHHHHHHHhcc
Q 022250 160 LIAPTLSIGSILLQQAAISASF 181 (300)
Q Consensus 160 v~a~N~SiGv~ll~~~a~~~~~ 181 (300)
+ +|=|--.|-|.-+++.+-.
T Consensus 148 I--SNasCTTn~Lap~lk~L~d 167 (335)
T 3doc_A 148 I--SNASCTTNCLAPVAQVLND 167 (335)
T ss_dssp E--ECCCHHHHHHHHHHHHHHH
T ss_pred E--ecCchhhhhhHHhHHHHHH
Confidence 4 6777777777666666643
No 189
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.29 E-value=0.0031 Score=51.58 Aligned_cols=121 Identities=12% Similarity=0.174 Sum_probs=68.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee-c---CHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-S---DLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~-~---dl~~~l~~~~~~~~~DVV 110 (300)
..+|+|+|+ |.||+.+++.+.+ .+.+++. +|++. .....+. ...++.++ . +.+.+.+. ...++|+|
T Consensus 19 ~~~v~IiG~-G~iG~~la~~L~~-~g~~V~v-id~~~--~~~~~~~---~~~g~~~~~~d~~~~~~l~~~--~~~~ad~V 88 (155)
T 2g1u_A 19 SKYIVIFGC-GRLGSLIANLASS-SGHSVVV-VDKNE--YAFHRLN---SEFSGFTVVGDAAEFETLKEC--GMEKADMV 88 (155)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-EESCG--GGGGGSC---TTCCSEEEESCTTSHHHHHTT--TGGGCSEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHh-CCCeEEE-EECCH--HHHHHHH---hcCCCcEEEecCCCHHHHHHc--CcccCCEE
Confidence 368999998 9999999998875 4677664 56432 1111111 02333222 2 22222110 01368999
Q ss_pred EEcCCchhHHHHHHH-HHH-cCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 111 IDFTDASTVYDNVKQ-ATA-FGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 111 IDfT~p~~~~~~~~~-al~-~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
|.++..+.....+.. +.. .+...++..+ +. +..+.+ ++.|+. ++.|....+-.+.
T Consensus 89 i~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~--~~~~~l----~~~G~~-vi~p~~~~a~~l~ 146 (155)
T 2g1u_A 89 FAFTNDDSTNFFISMNARYMFNVENVIARVYDP--EKIKIF----EENGIK-TICPAVLMIEKVK 146 (155)
T ss_dssp EECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG--GGHHHH----HTTTCE-EECHHHHHHHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH--HHHHHH----HHCCCc-EEcHHHHHHHHHH
Confidence 998876665554444 444 5666666544 33 222223 346788 8888877775443
No 190
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=97.29 E-value=0.0007 Score=63.35 Aligned_cols=152 Identities=21% Similarity=0.212 Sum_probs=89.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-C-------------CCcchhhhh--cCc---CCCCccee--cC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-S-------------VGEDIGMVC--DME---QPLEIPVM--SD 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-~-------------~g~d~~~~~--g~~---~~~gv~v~--~d 93 (300)
|+||+|+|. ||+||.+.+++.+.+++|+|++=|+. . .|+=-+++. |-. ....++++ .|
T Consensus 1 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 1 MVRVAINGF-GRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CeEEEEECC-CcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 589999998 99999999999888899999987741 0 011000000 000 00113343 24
Q ss_pred HHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC---------CCCHHHHHHHHHHhhhCCCeEEEcC
Q 022250 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP---------HIQLETVSALSAFCDKASMGCLIAP 163 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT---------G~~~e~~~~L~~~a~~~~i~iv~a~ 163 (300)
++++-= .+..+|+|++.|-.....+.+...++.|.. |||..| |.+.+.++ .+ -.++ +
T Consensus 80 p~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~------~~--~~II--S 146 (332)
T 3pym_A 80 PANLPW---GSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYT------SD--LKIV--S 146 (332)
T ss_dssp GGGSCT---TTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCC------TT--CCEE--E
T ss_pred cccCCc---cccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcC------cc--ccEE--e
Confidence 443210 024789999988888888899999999965 455433 33443321 11 2344 6
Q ss_pred CCcHHHHHHHHHHHHhccCCCCeE---EEEccC----C-CCCCCch
Q 022250 164 TLSIGSILLQQAAISASFHYKNVE---IVESRP----N-ARDFPSP 201 (300)
Q Consensus 164 N~SiGv~ll~~~a~~~~~~~~die---IiE~Hh----~-K~DaPSG 201 (300)
|=|--.|-|.-+++.+-.. |.|+ +.-.|. + -.|.||+
T Consensus 147 nasCTTn~Lap~lkvL~d~-fGI~~g~mTTvha~T~~Q~~vDg~~~ 191 (332)
T 3pym_A 147 NASCTTNCLAPLAKVINDA-FGIEEGLMTTVHSLTATQKTVDGPSH 191 (332)
T ss_dssp CCCHHHHHHHHHHHHHHHH-HCEEEEEEEEEEECCTTSCSSSCCCT
T ss_pred cCcchhhhhHHHHHHHHHh-cCeEEEEEEEEeeccccchhccCCCc
Confidence 7777777776666666432 3333 233363 2 3678875
No 191
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.28 E-value=0.0029 Score=62.17 Aligned_cols=119 Identities=11% Similarity=0.084 Sum_probs=71.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCc-CCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+||+|+|+ |.||+.++..+.+ .+++++ ++|++. ..+..+.... ....+..+.|++++++++ ..+|+||-.
T Consensus 4 ~~kIgiIGl-G~MG~~lA~~L~~-~G~~V~-v~dr~~--~~~~~l~~~g~~g~~i~~~~s~~e~v~~l---~~aDvVil~ 75 (484)
T 4gwg_A 4 QADIALIGL-AVMGQNLILNMND-HGFVVC-AFNRTV--SKVDDFLANEAKGTKVVGAQSLKEMVSKL---KKPRRIILL 75 (484)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHTB---CSSCEEEEC
T ss_pred CCEEEEECh-hHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHhcccCCCceeccCCHHHHHhhc---cCCCEEEEe
Confidence 589999997 9999999999875 477765 567653 2222222100 011233468899987521 258999977
Q ss_pred CCch-hHHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEc
Q 022250 114 TDAS-TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIA 162 (300)
Q Consensus 114 T~p~-~~~~~~~~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a 162 (300)
.++. .+.+.+... ++.|.-+|.++|+... ...++.+..++.++..+=+
T Consensus 76 Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~-~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 76 VKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYR-DTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp SCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEE
T ss_pred cCChHHHHHHHHHHHHhcCCCCEEEEcCCCCch-HHHHHHHHHHhhccccccC
Confidence 7664 455555443 3456656666666533 3334444455556655443
No 192
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.27 E-value=0.00074 Score=61.54 Aligned_cols=100 Identities=14% Similarity=0.120 Sum_probs=56.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc-hh--------hh--hcCcCC------------CCccee
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED-IG--------MV--CDMEQP------------LEIPVM 91 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d-~~--------~~--~g~~~~------------~gv~v~ 91 (300)
|.||+|+|+ |.||..++..+.+ .+++++ ++|++..-.+ +. .+ .|.-.. ..+.++
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~-~G~~V~-~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAA-TGHTVV-LVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 468999998 9999999998875 478866 5775420000 00 00 010000 124557
Q ss_pred cCHHHHHhcccccCCccEEEEcCCchh-H-HHHHHHHHH---cCCCEEE-eCCCCCHHH
Q 022250 92 SDLTMVLGSISQSKARAVVIDFTDAST-V-YDNVKQATA---FGMRSVV-YVPHIQLET 144 (300)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVVIDfT~p~~-~-~~~~~~al~---~G~~vVi-gTTG~~~e~ 144 (300)
+|+++++ .++|+||.+.+++. . .+.+....+ .+. +|+ -|++++.++
T Consensus 92 ~~~~~~~------~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~-iv~s~ts~i~~~~ 143 (302)
T 1f0y_A 92 TDAASVV------HSTDLVVEAIVENLKVKNELFKRLDKFAAEHT-IFASNTSSLQITS 143 (302)
T ss_dssp SCHHHHT------TSCSEEEECCCSCHHHHHHHHHHHTTTSCTTC-EEEECCSSSCHHH
T ss_pred cCHHHhh------cCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHH
Confidence 7888776 47999998775433 1 223332222 233 444 455887654
No 193
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=97.27 E-value=0.00077 Score=63.42 Aligned_cols=99 Identities=19% Similarity=0.107 Sum_probs=61.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC--------------CCcchhh--hhcCc---CCCCcceec--C
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--------------VGEDIGM--VCDME---QPLEIPVMS--D 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--------------~g~d~~~--~~g~~---~~~gv~v~~--d 93 (300)
.+||+|+|. ||+||.+.+++.+++++|||++-|+.. .|+--++ +-+-. ....+.++. |
T Consensus 11 ~~kv~INGf-GrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeCC-chHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 689999997 999999999999999999999988210 0110000 00000 001123332 3
Q ss_pred HHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeC
Q 022250 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYV 137 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigT 137 (300)
++++-- .+.++|+|+++|......+.+..+++.|.. |||..
T Consensus 90 p~~~~w---~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsa 131 (345)
T 2b4r_O 90 PSQIPW---GKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSA 131 (345)
T ss_dssp GGGCCH---HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESS
T ss_pred cccCcc---cccCCCEEEECcCccccHhhHHHHHHCCCCEEEECC
Confidence 333210 002689999888777778888888998875 55543
No 194
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=97.26 E-value=0.00031 Score=65.73 Aligned_cols=91 Identities=16% Similarity=0.102 Sum_probs=60.0
Q ss_pred ceEEEEcCCchHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceec-CHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~--~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVVID 112 (300)
|||+|+|++|++|+.+++.+. ..|..+|+...+....|+... +.| ..+.+++ +.+ + + ++|+|++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~~g----~~i~v~~~~~~---~---~--~~DvV~~ 67 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-FRG----EEIPVEPLPEG---P---L--PVDLVLA 67 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-ETT----EEEEEEECCSS---C---C--CCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-EcC----ceEEEEeCChh---h---c--CCCEEEE
Confidence 589999999999999999988 567777764433322222211 101 1223322 211 1 1 5899998
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCC
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG 139 (300)
++......+.+..+++.|..+|.-+..
T Consensus 68 a~g~~~s~~~a~~~~~~G~~vId~s~~ 94 (331)
T 2yv3_A 68 SAGGGISRAKALVWAEGGALVVDNSSA 94 (331)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEEECSSS
T ss_pred CCCccchHHHHHHHHHCCCEEEECCCc
Confidence 888788899999999999977765443
No 195
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=97.26 E-value=0.0008 Score=62.26 Aligned_cols=45 Identities=20% Similarity=0.062 Sum_probs=30.3
Q ss_pred eeEeecCCCC---CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 24 FISCSTNPPQ---SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 24 ~~~~~~~~~~---~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
...|+-++.. +|+||.|+|++|.+|+.+++.+.+.++++++++..
T Consensus 10 ~~~~~~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 10 GTLEAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp -------------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred cchhhhhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 4566666642 35799999999999999999998777899887654
No 196
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.25 E-value=0.00079 Score=63.82 Aligned_cols=84 Identities=14% Similarity=0.111 Sum_probs=51.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe---cCCCCcchhhhh---cC--c--CCCC--------cc-eecCH
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID---SHSVGEDIGMVC---DM--E--QPLE--------IP-VMSDL 94 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd---~~~~g~d~~~~~---g~--~--~~~g--------v~-v~~dl 94 (300)
|||||+|+|+ |.||..++..+.+..+.++. +++ ++. ..+.... |. . ...+ +. +++|+
T Consensus 1 ~~mkI~ViGa-G~~G~~~a~~La~~~G~~V~-~~~~~~r~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 1 MTVKVCVCGG-GNGAHTLSGLAASRDGVEVR-VLTLFADEA--ERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHTTSTTEEEE-EECCSTTHH--HHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred CCceEEEECC-CHHHHHHHHHHHhCCCCEEE-EEeCCCCcH--HHHHHHHhhccceeeeecCCCccceeeccceEEeCCH
Confidence 4689999998 99999999988654577766 455 311 1111111 00 0 0001 22 56788
Q ss_pred HHHHhcccccCCccEEEEcCCchhHHHHHHHHH
Q 022250 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQAT 127 (300)
Q Consensus 95 ~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al 127 (300)
++++ .++|+||.++.+....+.+....
T Consensus 77 ~~a~------~~aD~Vilav~~~~~~~v~~~l~ 103 (404)
T 3c7a_A 77 EIAI------SGADVVILTVPAFAHEGYFQAMA 103 (404)
T ss_dssp HHHH------TTCSEEEECSCGGGHHHHHHHHT
T ss_pred HHHh------CCCCEEEEeCchHHHHHHHHHHH
Confidence 8877 37999998887777666665443
No 197
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.24 E-value=0.0027 Score=51.15 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=73.2
Q ss_pred CCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee----cCHHHHHhcccccC
Q 022250 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSK 105 (300)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~ 105 (300)
+|..++-+|.|+|+ |++|+.+++.+.+ .+.+++. +|.+. .....+. +.|+.++ ++.+ .+.+. .-.
T Consensus 2 ~~~~~~~~viIiG~-G~~G~~la~~L~~-~g~~v~v-id~~~--~~~~~~~----~~g~~~i~gd~~~~~-~l~~a-~i~ 70 (140)
T 3fwz_A 2 NAVDICNHALLVGY-GRVGSLLGEKLLA-SDIPLVV-IETSR--TRVDELR----ERGVRAVLGNAANEE-IMQLA-HLE 70 (140)
T ss_dssp CCCCCCSCEEEECC-SHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEESCTTSHH-HHHHT-TGG
T ss_pred CcccCCCCEEEECc-CHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHHH----HcCCCEEECCCCCHH-HHHhc-Ccc
Confidence 56677889999998 9999999998875 5777665 56442 1122211 2344332 2222 22210 013
Q ss_pred CccEEEEcCCchhH-HHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH
Q 022250 106 ARAVVIDFTDASTV-YDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (300)
Q Consensus 106 ~~DVVIDfT~p~~~-~~~~~~al~~--G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~ 175 (300)
++|++|-++..+.. ...+..+.+. ++++|.- ..+++..+.|. +.|+-.++.|....+-.++..+
T Consensus 71 ~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar--~~~~~~~~~l~----~~G~d~vi~p~~~~a~~i~~~l 137 (140)
T 3fwz_A 71 CAKWLILTIPNGYEAGEIVASARAKNPDIEIIAR--AHYDDEVAYIT----ERGANQVVMGEREIARTMLELL 137 (140)
T ss_dssp GCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE--ESSHHHHHHHH----HTTCSEEEEHHHHHHHHHHHHH
T ss_pred cCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEE--ECCHHHHHHHH----HCCCCEEECchHHHHHHHHHHh
Confidence 68999877665443 3334444443 3444432 23444544443 4667788888877776655443
No 198
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.23 E-value=0.0012 Score=58.94 Aligned_cols=112 Identities=10% Similarity=0.046 Sum_probs=67.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee----c---CHHHHHhcccccCCcc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----S---DLTMVLGSISQSKARA 108 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~----~---dl~~~l~~~~~~~~~D 108 (300)
|||.|.|++|.+|+.+++.+.+.++.++++...... ....+. ..++.+. + ++++++ .++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~---~~~~~~----~~~v~~~~~D~~d~~~l~~~~------~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE---KVPDDW----RGKVSVRQLDYFNQESMVEAF------KGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG---GSCGGG----BTTBEEEECCTTCHHHHHHHT------TTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH---HHHHhh----hCCCEEEEcCCCCHHHHHHHH------hCCC
Confidence 579999999999999999987666888887664321 111111 1233221 2 344455 4789
Q ss_pred EEEEcCCc--------hhHHHHHHHHHHcCCC-EE-EeCCCC------C-HHHHHHHHHHhhhCCCeEE
Q 022250 109 VVIDFTDA--------STVYDNVKQATAFGMR-SV-VYVPHI------Q-LETVSALSAFCDKASMGCL 160 (300)
Q Consensus 109 VVIDfT~p--------~~~~~~~~~al~~G~~-vV-igTTG~------~-~e~~~~L~~~a~~~~i~iv 160 (300)
+||.+..+ ..+...+..|.++|+. +| +++.+- . ......+++..++.++++.
T Consensus 68 ~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ 136 (289)
T 3e48_A 68 TVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYT 136 (289)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEE
T ss_pred EEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEE
Confidence 99987643 3445677888888865 44 233221 1 1122345566666666654
No 199
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=97.23 E-value=0.00098 Score=65.43 Aligned_cols=76 Identities=8% Similarity=0.078 Sum_probs=65.0
Q ss_pred CCcceecCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 86 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 86 ~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
.++|+|..+.++.+. ...+|++|.|.+++.+.+.++.|.++|+++||=|.||..+...+|.++|+++|+. ++.||-
T Consensus 19 ~~~Pv~~~~~~~~~~---p~~~DlavI~vPa~~v~~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~r-liGPNc 94 (480)
T 3dmy_A 19 QALTQVRRWDSACQK---LPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLL-VMGPDC 94 (480)
T ss_dssp -CCEEESSHHHHHHH---STTCCEEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCC-EECSSC
T ss_pred CCCcccchHHHHHhc---CCCCCEEEEecCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCE-EEecCc
Confidence 368999888887652 2468999999999999999999999999988877799987778999999999986 678997
No 200
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.19 E-value=0.001 Score=60.28 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=58.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---------------cCcC------CCCcceecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---------------DMEQ------PLEIPVMSD 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---------------g~~~------~~gv~v~~d 93 (300)
+.||+|+|+ |.||+.+++.+.. .+++++. +|++. ..+.... ++.. ...+...+|
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~-~G~~V~l-~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 78 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAF-HGFAVTA-YDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDD 78 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESC
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEEE-EeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCC
Confidence 468999998 9999999998875 5888764 67542 1111100 0000 001345688
Q ss_pred HHHHHhcccccCCccEEEEcCCch--hHHHHHHHH---HHcCCCEEEeCCCCCHHHH
Q 022250 94 LTMVLGSISQSKARAVVIDFTDAS--TVYDNVKQA---TAFGMRSVVYVPHIQLETV 145 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~--~~~~~~~~a---l~~G~~vVigTTG~~~e~~ 145 (300)
+++++ .++|+||...+++ ...+..... +..+.-++.-|++++.+++
T Consensus 79 ~~~~~------~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~l 129 (283)
T 4e12_A 79 LAQAV------KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDL 129 (283)
T ss_dssp HHHHT------TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHh------ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHH
Confidence 88887 4799999887654 333333333 3333333334557776543
No 201
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.17 E-value=0.005 Score=48.40 Aligned_cols=124 Identities=13% Similarity=0.278 Sum_probs=70.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-e---cCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVVI 111 (300)
|||+|+|+ |.||+.+++.+.+ .+.+++ ++|++. .....+. ...++.+ . .+.+.+.+. ...++|+||
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~-~g~~v~-~~d~~~--~~~~~~~---~~~~~~~~~~d~~~~~~l~~~--~~~~~d~vi 74 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSE-KGHDIV-LIDIDK--DICKKAS---AEIDALVINGDCTKIKTLEDA--GIEDADMYI 74 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESCH--HHHHHHH---HHCSSEEEESCTTSHHHHHHT--TTTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHH---HhcCcEEEEcCCCCHHHHHHc--CcccCCEEE
Confidence 68999998 9999999998875 467766 456532 1122121 1123322 1 233332210 014689999
Q ss_pred EcCCchhHHHHH-HHHHHcCC-CEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH
Q 022250 112 DFTDASTVYDNV-KQATAFGM-RSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (300)
Q Consensus 112 DfT~p~~~~~~~-~~al~~G~-~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~ 175 (300)
.++..+.....+ ..+.+.+. .+|+-+++...+ +.+ ++.|+..+++|....+-.+...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--~~l----~~~g~~~v~~p~~~~~~~~~~~~ 134 (140)
T 1lss_A 75 AVTGKEEVNLMSSLLAKSYGINKTIARISEIEYK--DVF----ERLGVDVVVSPELIAANYIEKLI 134 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHH--HHH----HHTTCSEEECHHHHHHHHHHHHH
T ss_pred EeeCCchHHHHHHHHHHHcCCCEEEEEecCHhHH--HHH----HHcCCCEEECHHHHHHHHHHHHh
Confidence 887665443333 44444553 566655554332 223 34667788988888876655443
No 202
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.16 E-value=0.00022 Score=57.81 Aligned_cols=85 Identities=11% Similarity=0.142 Sum_probs=55.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc--ceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
..||+|+|+ |.||+.+++.+.. .+++ +.+++++. ..+..++ ..+++ ..++++++++. ++|+||.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~-~g~~-v~v~~r~~--~~~~~~a---~~~~~~~~~~~~~~~~~~------~~Divi~ 86 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSY-PQYK-VTVAGRNI--DHVRAFA---EKYEYEYVLINDIDSLIK------NNDVIIT 86 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCT-TTCE-EEEEESCH--HHHHHHH---HHHTCEEEECSCHHHHHH------TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCE-EEEEcCCH--HHHHHHH---HHhCCceEeecCHHHHhc------CCCEEEE
Confidence 368999997 9999999998775 6889 77888653 2222222 12233 34678888884 7899998
Q ss_pred cCCchhHHHHHHHHHHcCCCEE
Q 022250 113 FTDASTVYDNVKQATAFGMRSV 134 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vV 134 (300)
.|+..... ....+++.|..++
T Consensus 87 at~~~~~~-~~~~~l~~g~~vi 107 (144)
T 3oj0_A 87 ATSSKTPI-VEERSLMPGKLFI 107 (144)
T ss_dssp CSCCSSCS-BCGGGCCTTCEEE
T ss_pred eCCCCCcE-eeHHHcCCCCEEE
Confidence 88543211 1123445566665
No 203
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=97.15 E-value=0.0029 Score=57.80 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=27.3
Q ss_pred eccccCcccccccceeeEeecCCCCCcceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEE
Q 022250 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAI 67 (300)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~v 67 (300)
|-|-|||+-+-++..--++. .+++||.|.|++|.+|+.+++.+.+. .++++++.-
T Consensus 2 ~~~~~~~~~~~~~~~n~~~~----~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 2 HHHHHHSSGVDLGTENLYFQ----SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp --------------------------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcccccccccccCccccccc----cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEe
Confidence 66667776655433222221 22589999999999999999998865 347777654
No 204
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.13 E-value=0.0036 Score=61.37 Aligned_cols=124 Identities=16% Similarity=0.104 Sum_probs=68.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCC--Ccchhhhh-cCcC-----------------CCCcceecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV--GEDIGMVC-DMEQ-----------------PLEIPVMSD 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~--g~d~~~~~-g~~~-----------------~~gv~v~~d 93 (300)
++||+|+|+ |.||..++..+.+.+++ ++++ +|.+.. ...+..+. |... ...+..++|
T Consensus 18 ~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~-~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 18 IKKIGVLGM-GYVGIPAAVLFADAPCFEKVLG-FQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHSTTCCEEEE-ECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCCeEEE-EECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 589999997 99999999998876588 8775 675431 00121211 1000 112445566
Q ss_pred HHHHHhcccccCCccEEEEcCCch------------hHH---HHHHHHHHcCCCEEEeCC---CCCHHHHHHHH-HHhhh
Q 022250 94 LTMVLGSISQSKARAVVIDFTDAS------------TVY---DNVKQATAFGMRSVVYVP---HIQLETVSALS-AFCDK 154 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~------------~~~---~~~~~al~~G~~vVigTT---G~~~e~~~~L~-~~a~~ 154 (300)
.+++ .++|+||.+.+.. .+. +.+...++.|.-||..+| |.+++-.+.+. +....
T Consensus 96 -~ea~------~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 96 -FSRI------SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp -GGGG------GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCC
T ss_pred -HHHH------hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCC
Confidence 4555 3789998764221 122 233334456765666555 44443333333 22210
Q ss_pred ---CCCeEEEcCCCcH
Q 022250 155 ---ASMGCLIAPTLSI 167 (300)
Q Consensus 155 ---~~i~iv~a~N~Si 167 (300)
....++.+|.|--
T Consensus 169 ~~~~d~~v~~~Pe~~~ 184 (478)
T 3g79_A 169 KAGEDFALAHAPERVM 184 (478)
T ss_dssp CBTTTBEEEECCCCCC
T ss_pred CcCCceeEEeCCccCC
Confidence 1258999998743
No 205
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=97.11 E-value=0.006 Score=54.59 Aligned_cols=91 Identities=11% Similarity=0.026 Sum_probs=54.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-------ecCHHHHHhcccccCC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKA 106 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~ 106 (300)
++++|.|.|++|.+|+.+++.+.+..+.+++++..... ......+. ..++.+ .+++++++ .+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-~~~~~~l~----~~~~~~~~~D~~d~~~l~~~~------~~ 72 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-KKAAKELR----LQGAEVVQGDQDDQVIMELAL------NG 72 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-SHHHHHHH----HTTCEEEECCTTCHHHHHHHH------TT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-CHHHHHHH----HCCCEEEEecCCCHHHHHHHH------hc
Confidence 35789999999999999999998764488887553321 11111111 112221 12344555 36
Q ss_pred ccEEEEcCCch----------hHHHHHHHHHHcCCC-EEE
Q 022250 107 RAVVIDFTDAS----------TVYDNVKQATAFGMR-SVV 135 (300)
Q Consensus 107 ~DVVIDfT~p~----------~~~~~~~~al~~G~~-vVi 135 (300)
+|+||.++.+. .....+..|.+.|+. +|.
T Consensus 73 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 73 AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 89999876421 234556677778865 444
No 206
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=97.07 E-value=0.0015 Score=59.05 Aligned_cols=135 Identities=14% Similarity=0.145 Sum_probs=74.9
Q ss_pred eEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc--hhhhhcCcCCCCccee-------cCHH
Q 022250 25 ISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED--IGMVCDMEQPLEIPVM-------SDLT 95 (300)
Q Consensus 25 ~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d--~~~~~g~~~~~gv~v~-------~dl~ 95 (300)
.+|+.. +||.||.|.|++|.+|+.+++.+.+. +.++.++..... ... ...+. ..++.+. +++.
T Consensus 3 ~~m~~~--~m~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~-~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~ 74 (318)
T 2r6j_A 3 HGMEEN--GMKSKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNS-SKTTLLDEFQ----SLGAIIVKGELDEHEKLV 74 (318)
T ss_dssp --------CCCCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTC-SCHHHHHHHH----HTTCEEEECCTTCHHHHH
T ss_pred Cccccc--CCCCeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCC-chhhHHHHhh----cCCCEEEEecCCCHHHHH
Confidence 345443 34568999999999999999998864 677776543321 110 11111 1223221 2344
Q ss_pred HHHhcccccCCccEEEEcCCc---hhHHHHHHHHHHcC-CCEEEeCC-CCC--------H-----HHHHHHHHHhhhCCC
Q 022250 96 MVLGSISQSKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQ--------L-----ETVSALSAFCDKASM 157 (300)
Q Consensus 96 ~~l~~~~~~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVigTT-G~~--------~-----e~~~~L~~~a~~~~i 157 (300)
+++ .++|+||.++.+ ......+..|.++| +.-++-+. |.+ + .....++++.++.++
T Consensus 75 ~a~------~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~ 148 (318)
T 2r6j_A 75 ELM------KKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANI 148 (318)
T ss_dssp HHH------TTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHH------cCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCC
Confidence 555 379999988754 34567778888888 66555333 421 1 112346666666666
Q ss_pred eEE-EcCCCcHHHHHHHH
Q 022250 158 GCL-IAPTLSIGSILLQQ 174 (300)
Q Consensus 158 ~iv-~a~N~SiGv~ll~~ 174 (300)
++. +.||+=.+ +++..
T Consensus 149 ~~~~lr~~~~~~-~~~~~ 165 (318)
T 2r6j_A 149 PYTYVSANCFAS-YFINY 165 (318)
T ss_dssp CBEEEECCEEHH-HHHHH
T ss_pred CeEEEEcceehh-hhhhh
Confidence 643 45665333 44433
No 207
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.05 E-value=0.004 Score=59.94 Aligned_cols=69 Identities=20% Similarity=0.290 Sum_probs=44.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-Cc-----------C---CCC-cceecCHHHHHh
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-ME-----------Q---PLE-IPVMSDLTMVLG 99 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g-~~-----------~---~~g-v~v~~dl~~~l~ 99 (300)
|||+|+|+ |.||..++..+.+ .++++++ +|.+. ..+..+.. .. . ..+ +..++|++++++
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~-~G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSA-RGHEVIG-VDVSS--TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL 75 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence 58999997 9999999998875 4788654 66532 11111110 00 0 022 556788888774
Q ss_pred cccccCCccEEEEcCC
Q 022250 100 SISQSKARAVVIDFTD 115 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT~ 115 (300)
++|+||.+.+
T Consensus 76 ------~aDvviiaVp 85 (436)
T 1mv8_A 76 ------DSDVSFICVG 85 (436)
T ss_dssp ------TCSEEEECCC
T ss_pred ------cCCEEEEEcC
Confidence 7899998764
No 208
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.05 E-value=0.0069 Score=58.85 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=45.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhh---------------hhcCcCCCCcceecCHHHHH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGM---------------VCDMEQPLEIPVMSDLTMVL 98 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~---------------~~g~~~~~gv~v~~dl~~~l 98 (300)
||||+|+|+ |.||..++..+.+. +++++++ +|++. ..+.. +.......++..++|+++++
T Consensus 5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~-~d~~~--~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 5 IKKICCIGA-GYVGGPTCSVIAHMCPEIRVTV-VDVNE--SRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHH
Confidence 579999997 99999999988765 2788664 66531 11111 11000012456678888877
Q ss_pred hcccccCCccEEEEcC
Q 022250 99 GSISQSKARAVVIDFT 114 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT 114 (300)
+ ++|+||.+.
T Consensus 81 ~------~aDvViiaV 90 (467)
T 2q3e_A 81 K------EADLVFISV 90 (467)
T ss_dssp H------HCSEEEECC
T ss_pred h------cCCEEEEEc
Confidence 4 689999775
No 209
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.01 E-value=0.0078 Score=54.81 Aligned_cols=89 Identities=13% Similarity=0.175 Sum_probs=58.3
Q ss_pred CcceEEEEc-CCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIING-AVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~G-a~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
|+.||+|+| + |.||..++..+.+ .++++. ++|++. + .+.++++ .++|+||.
T Consensus 20 ~~~~I~iIGg~-G~mG~~la~~l~~-~G~~V~-~~~~~~---~----------------~~~~~~~------~~aDvVil 71 (298)
T 2pv7_A 20 DIHKIVIVGGY-GKLGGLFARYLRA-SGYPIS-ILDRED---W----------------AVAESIL------ANADVVIV 71 (298)
T ss_dssp TCCCEEEETTT-SHHHHHHHHHHHT-TTCCEE-EECTTC---G----------------GGHHHHH------TTCSEEEE
T ss_pred CCCEEEEEcCC-CHHHHHHHHHHHh-CCCeEE-EEECCc---c----------------cCHHHHh------cCCCEEEE
Confidence 457999999 7 9999999998875 466655 355432 0 1345666 47899998
Q ss_pred cCCchhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHH
Q 022250 113 FTDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAF 151 (300)
Q Consensus 113 fT~p~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~ 151 (300)
+.+|....+.+..... .+. +|+-.++......+.+.+.
T Consensus 72 avp~~~~~~vl~~l~~~l~~~~-iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 72 SVPINLTLETIERLKPYLTENM-LLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTS-EEEECCSCCHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHhhcCCCc-EEEECCCCCcHHHHHHHHh
Confidence 8888887777765543 233 5555555554444444443
No 210
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=97.00 E-value=0.0012 Score=61.88 Aligned_cols=131 Identities=23% Similarity=0.184 Sum_probs=78.2
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-------------CCCCcchhhhh--c--Cc-CCCCcceec--CHH
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-------------HSVGEDIGMVC--D--ME-QPLEIPVMS--DLT 95 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-------------~~~g~d~~~~~--g--~~-~~~gv~v~~--dl~ 95 (300)
+||+|+|+ |++|+.+.+++.++ +++++++-|. ...|+-.++.. + +. ....++++. |++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 78 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChh
Confidence 58999998 99999999998887 9999998763 11221100000 0 00 001244442 444
Q ss_pred HHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCC-CEEEeCCC----------CCHHHHHHHHHHhhhCCCeEEEcCC
Q 022250 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVPH----------IQLETVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 96 ~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~-~vVigTTG----------~~~e~~~~L~~~a~~~~i~iv~a~N 164 (300)
++-- .+.++|+|+++|......+.+...++.|. .+||..++ .+.++++ . +. -.++ +|
T Consensus 79 ~l~w---~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~---~--~~--~~II--sn 146 (331)
T 2g82_O 79 EIPW---AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYD---P--SR--HHII--SN 146 (331)
T ss_dssp GSCT---TTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCC---T--TT--CCEE--EC
T ss_pred hCcc---cccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhC---c--CC--CCEE--EC
Confidence 3310 01368999999988888999999999996 35555443 2222211 1 11 2344 56
Q ss_pred CcHHHHHHHHHHHHhc
Q 022250 165 LSIGSILLQQAAISAS 180 (300)
Q Consensus 165 ~SiGv~ll~~~a~~~~ 180 (300)
=|--.|-|.-+++.+.
T Consensus 147 asCtTn~lap~lk~L~ 162 (331)
T 2g82_O 147 ASCTTNSLAPVMKVLE 162 (331)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHH
Confidence 6666676666666654
No 211
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.99 E-value=0.0013 Score=59.41 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=55.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cCcC-------CCCcceecCHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DMEQ-------PLEIPVMSDLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--g~~~-------~~gv~v~~dl~~~l~~~~~~ 104 (300)
|||||+|+|+ |.||+.++..+.+ .++++.. +|++. .....+. |... ...+.++ +.+++.+. -
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~r~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~ 72 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQ-GGNDVTL-IDQWP--AHIEAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQ---N 72 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHHHCEEEEETTEEEEECCCEE-CGGGCCTT---S
T ss_pred CCCeEEEECc-CHHHHHHHHHHHh-CCCcEEE-EECCH--HHHHHHHhCCEEEEeCCCeeEecceee-cchhhccc---C
Confidence 4689999998 9999999998875 4677664 56432 1111111 1000 0011111 22232210 0
Q ss_pred CCccEEEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCH
Q 022250 105 KARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~ 142 (300)
.++|+||-++.+....+.+..... .+..+|.-++|+..
T Consensus 73 ~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 73 EQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp CCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred CCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 278999988887776666655433 34556655668763
No 212
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=96.98 E-value=0.004 Score=58.31 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=86.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-C-------------CCcchh-hhh---c--Cc-CCCCccee--
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-S-------------VGEDIG-MVC---D--ME-QPLEIPVM-- 91 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-~-------------~g~d~~-~~~---g--~~-~~~gv~v~-- 91 (300)
|+||+|+|. ||+||.+.+++.+.+++|+|++-|+. . .|+=-+ ++. + +. ....++++
T Consensus 3 ~~kv~INGf-GrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEECC-ChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 589999998 99999999999888899999987751 0 011000 000 0 00 00013333
Q ss_pred cCHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC---------CCCHHHHHHHHHHhhhCCCeEEE
Q 022250 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP---------HIQLETVSALSAFCDKASMGCLI 161 (300)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT---------G~~~e~~~~L~~~a~~~~i~iv~ 161 (300)
.|++++-= .+..+|+|++.|-.....+.+...++.|.. |||..| |.+.+.++. + -.++
T Consensus 82 ~dp~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~------~--~~II- 149 (337)
T 3v1y_O 82 RNPDEIPW---AEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTS------D--IDIV- 149 (337)
T ss_dssp SSGGGCCH---HHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCT------T--CCEE-
T ss_pred cCcccCCc---cccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCC------C--CcEE-
Confidence 23333200 013689999888777778888888888864 555433 334433211 1 2344
Q ss_pred cCCCcHHHHHHHHHHHHhccCCCCeE---EEEccC----C-CCCCCch
Q 022250 162 APTLSIGSILLQQAAISASFHYKNVE---IVESRP----N-ARDFPSP 201 (300)
Q Consensus 162 a~N~SiGv~ll~~~a~~~~~~~~die---IiE~Hh----~-K~DaPSG 201 (300)
+|=|--.|-|.-+++.+-.. |.|+ +.-.|. + ..|.|++
T Consensus 150 -SnasCTTn~Lap~lkvL~d~-fGI~~g~mTTvha~T~~q~~~Dg~~~ 195 (337)
T 3v1y_O 150 -SNASCTTNCLAPLAKVIHDN-FGIIEGLMTTVHAITATQKTVDGPSS 195 (337)
T ss_dssp -ECCCHHHHHHHHHHHHHHHH-HCEEEEEEEEEECCCTTSBSSSCCCT
T ss_pred -ecCchhhhhHHHHHHHHHHh-cCeEEEEEeeeeeccchhhhccCCcc
Confidence 66666667666666665432 2333 233363 2 3688874
No 213
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.96 E-value=0.0015 Score=59.82 Aligned_cols=120 Identities=16% Similarity=0.169 Sum_probs=67.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec--CCCCcchhhhh--cCcCCCC-----cceec--CHHHHHhccccc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVC--DMEQPLE-----IPVMS--DLTMVLGSISQS 104 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~--~~~g~d~~~~~--g~~~~~g-----v~v~~--dl~~~l~~~~~~ 104 (300)
|||+|+|+ |.||+.++..+.+ .+.++. ++|+ +. .....+. |.....+ +.+++ ++++++
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~-~g~~V~-~~~r~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------ 69 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVD-NGNEVR-IWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL------ 69 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHH-HCCEEE-EECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH------
T ss_pred CEEEEECc-CHHHHHHHHHHHh-CCCeEE-EEEccCCH--HHHHHHHHhCcCcccCccccceEEecHHhHHHHH------
Confidence 58999998 9999999998875 356765 4555 31 1112121 1000001 24455 777776
Q ss_pred CCccEEEEcCCchhHHHHHHHHH--HcCCCEEEeCCCC---CHHHHHHHHHHhhhC-----CCeEEEcCCCc
Q 022250 105 KARAVVIDFTDASTVYDNVKQAT--AFGMRSVVYVPHI---QLETVSALSAFCDKA-----SMGCLIAPTLS 166 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~al--~~G~~vVigTTG~---~~e~~~~L~~~a~~~-----~i~iv~a~N~S 166 (300)
.++|+||-++.+..+.+.+.... ..+..+|.-+.|+ .+...+.+.+...+. ..++...||+.
T Consensus 70 ~~~D~vi~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~ 141 (335)
T 1txg_A 70 ENAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIA 141 (335)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHTTTCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCH
T ss_pred hcCCEEEEcCChHHHHHHHHHHhcCCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcH
Confidence 47899998888877766665443 2344444434476 322222333333221 14567778874
No 214
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.95 E-value=0.0015 Score=59.27 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=58.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcC----C-cEEEEEEecCCCCcchhhhh---cCc--C------CCCcceecCHHHH
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKAR----G-MEVAGAIDSHSVGEDIGMVC---DME--Q------PLEIPVMSDLTMV 97 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~----~-~eLvg~vd~~~~g~d~~~~~---g~~--~------~~gv~v~~dl~~~ 97 (300)
+||||+|+|+ |.||..++..+.+.+ + .++. ++++. .....+. |.. . ...+.++++.+.
T Consensus 7 ~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~---~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 80 (317)
T 2qyt_A 7 QPIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVS-WIARG---AHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAE- 80 (317)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEE-EECCH---HHHHHHHHHTSEEEECSSCEEEECCSEEESCHHH-
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEE-EEEcH---HHHHHHHhcCCeEEEeCCCCeEEecceEecCccc-
Confidence 4589999998 999999999887651 5 6766 45542 1111111 110 0 011122345543
Q ss_pred HhcccccCCccEEEEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCH
Q 022250 98 LGSISQSKARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (300)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~ 142 (300)
+ .++|+||-++.+..+.+.+..... .+..+|.-++|+..
T Consensus 81 ~------~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 81 V------GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp H------CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred c------CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 3 478999988887777666654433 24556666778865
No 215
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=96.95 E-value=0.0012 Score=64.82 Aligned_cols=155 Identities=11% Similarity=0.079 Sum_probs=87.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc-----CCcEEEEEEecCCCCcchhhhhcCcCCCCcce----ecCHHHHHhcccccCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA-----RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSDLTMVLGSISQSKA 106 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-----~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v----~~dl~~~l~~~~~~~~ 106 (300)
.||+|+|+ |.||..+++.+.+. .+++++...+... +.. +.+ ...|+.. ..+++++++ .
T Consensus 55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~s--ks~-e~A---~e~G~~v~d~ta~s~aEAa~------~ 121 (525)
T 3fr7_A 55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGS--KSF-DEA---RAAGFTEESGTLGDIWETVS------G 121 (525)
T ss_dssp SEEEEECC-TTHHHHHHHHHHHHHHHTTCCCEEEEEECTTC--SCH-HHH---HHTTCCTTTTCEEEHHHHHH------H
T ss_pred CEEEEEeE-hHHHHHHHHHHHhcccccCCCCEEEEEeCCch--hhH-HHH---HHCCCEEecCCCCCHHHHHh------c
Confidence 68999998 99999999998865 2777765555432 111 111 1234443 257888884 7
Q ss_pred ccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCCCCHHHHHH-HHHHhhhCCCeEE-EcCCCcHHHHHHHHHHHHh-c
Q 022250 107 RAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSA-LSAFCDKASMGCL-IAPTLSIGSILLQQAAISA-S 180 (300)
Q Consensus 107 ~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG~~~e~~~~-L~~~a~~~~i~iv-~a~N~SiGv~ll~~~a~~~-~ 180 (300)
+|+||-..+|....+.+...+ +.|. +|+=..|++-..+++ ....-+ +++++ +.||..-- ++.+..... .
T Consensus 122 ADVVILaVP~~~~~eVl~eI~p~LK~Ga-ILs~AaGf~I~~le~~~i~~p~--dv~VVrVmPNtPg~--~VR~~y~~G~~ 196 (525)
T 3fr7_A 122 SDLVLLLISDAAQADNYEKIFSHMKPNS-ILGLSHGFLLGHLQSAGLDFPK--NISVIAVCPKGMGP--SVRRLYVQGKE 196 (525)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTC-EEEESSSHHHHHHHHTTCCCCT--TSEEEEEEESSCHH--HHHHHHHHHTT
T ss_pred CCEEEECCChHHHHHHHHHHHHhcCCCC-eEEEeCCCCHHHHhhhcccCCC--CCcEEEEecCCCch--hHHHHHhcccc
Confidence 899998888876655554333 3343 455567887544332 112222 35555 78888754 233332221 0
Q ss_pred cCCCCeE-EEEccCCCCCCCchHHHHHHHHHHh
Q 022250 181 FHYKNVE-IVESRPNARDFPSPDATQIANNLSN 212 (300)
Q Consensus 181 ~~~~die-IiE~Hh~K~DaPSGTA~~l~~~i~~ 212 (300)
-.+..+- .+-.|. | +||.|+.++..+.+
T Consensus 197 ~~g~Gv~~liAv~q---d-~tgea~e~alala~ 225 (525)
T 3fr7_A 197 INGAGINSSFAVHQ---D-VDGRATDVALGWSV 225 (525)
T ss_dssp STTCSCCEEEEEEE---C-SSSCHHHHHHHHHH
T ss_pred cccCCccEEEEcCC---C-CCHHHHHHHHHHHH
Confidence 0111111 222222 2 66777777777655
No 216
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=96.95 E-value=0.0018 Score=61.19 Aligned_cols=154 Identities=18% Similarity=0.074 Sum_probs=87.2
Q ss_pred CcceEEEEcCCchHHHHHHHH----HHhcCCcEEEEEEecCC--------------CCcchhhhhc--------CcC---
Q 022250 34 SNIKVIINGAVKEIGRAAVIA----VTKARGMEVAGAIDSHS--------------VGEDIGMVCD--------MEQ--- 84 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~----i~~~~~~eLvg~vd~~~--------------~g~d~~~~~g--------~~~--- 84 (300)
|++||+|+|. ||+||.+.++ +.+.+++|+|++-|+.. .|+=-+++.- -+.
T Consensus 1 m~~kv~INGF-GrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~ 79 (359)
T 3ids_C 1 MPIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLV 79 (359)
T ss_dssp CCEEEEEECT-THHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEE
T ss_pred CceEEEEECC-ChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEE
Confidence 6799999998 9999999998 66677899999987310 0100000000 000
Q ss_pred --CCCcceec---CHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCC----------CCCHHHHHHH
Q 022250 85 --PLEIPVMS---DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP----------HIQLETVSAL 148 (300)
Q Consensus 85 --~~gv~v~~---dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTT----------G~~~e~~~~L 148 (300)
...++++. |++++-= .+..+|+|++.|-.....+.+...++.|.. |||..| |.+.+.++
T Consensus 80 inGk~I~v~~~e~dp~~i~w---~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~-- 154 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPW---GKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYN-- 154 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCH---HHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCC--
T ss_pred ECCEEEEEEEccCCcccCCc---cccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcC--
Confidence 00133332 3332100 012689999888777778888888898865 555433 23333211
Q ss_pred HHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh-ccCCCCe---EEEEccC----C-CCCCCch
Q 022250 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISA-SFHYKNV---EIVESRP----N-ARDFPSP 201 (300)
Q Consensus 149 ~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~-~~~~~di---eIiE~Hh----~-K~DaPSG 201 (300)
.. + -.++ +|=|--.|-|.-+++.+ -.. |.| -+.-.|- + -.|.|++
T Consensus 155 -~~--~--~~II--SNaSCTTn~Lap~lkvL~~d~-fGI~~g~mTTvha~T~tQ~~vD~~~~ 208 (359)
T 3ids_C 155 -PS--E--HHVV--SNASCTTNCLAPIVHVLVKEG-FGVQTGLMTTIHSYTATQKTVDGVSV 208 (359)
T ss_dssp -TT--T--CSEE--ECCCHHHHHHHHHHHHHHHTT-CCCSEEEEEEEEECCTTSBSSSCCCT
T ss_pred -CC--C--CCEE--ECCchHhhhHHHhhhhhhhcc-CCeEEEEEeeeeeccchhhhhcCCcc
Confidence 00 1 2444 56666667777777777 533 333 2333463 2 3688876
No 217
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.93 E-value=0.0014 Score=61.09 Aligned_cols=75 Identities=20% Similarity=0.143 Sum_probs=52.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.++..+.. .+++++ +++++. ....+.+ ...|+.++ ++++++. ++|+||.++
T Consensus 16 ~~~I~IIG~-G~mG~alA~~L~~-~G~~V~-~~~~~~--~~~~~~a---~~~G~~~~-~~~e~~~------~aDvVilav 80 (338)
T 1np3_A 16 GKKVAIIGY-GSQGHAHACNLKD-SGVDVT-VGLRSG--SATVAKA---EAHGLKVA-DVKTAVA------AADVVMILT 80 (338)
T ss_dssp TSCEEEECC-SHHHHHHHHHHHH-TTCCEE-EECCTT--CHHHHHH---HHTTCEEE-CHHHHHH------TCSEEEECS
T ss_pred CCEEEEECc-hHHHHHHHHHHHH-CcCEEE-EEECCh--HHHHHHH---HHCCCEEc-cHHHHHh------cCCEEEEeC
Confidence 468999998 9999999998875 467765 455432 1111122 23455555 8888874 789999888
Q ss_pred CchhHHHHHH
Q 022250 115 DASTVYDNVK 124 (300)
Q Consensus 115 ~p~~~~~~~~ 124 (300)
++....+.+.
T Consensus 81 p~~~~~~v~~ 90 (338)
T 1np3_A 81 PDEFQGRLYK 90 (338)
T ss_dssp CHHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 8887766665
No 218
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.91 E-value=0.0054 Score=56.24 Aligned_cols=33 Identities=24% Similarity=0.130 Sum_probs=27.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
++||.|.|+||.+|+.+++.+.+. +.++.+...
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R 42 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILAR 42 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEEC
Confidence 479999999999999999999865 578776554
No 219
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.86 E-value=0.0026 Score=54.41 Aligned_cols=32 Identities=13% Similarity=0.390 Sum_probs=27.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|||.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~-~g~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLST-TDYQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-SSCEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 4899999999999999999885 5788887654
No 220
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.84 E-value=0.0022 Score=58.54 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=69.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVID 112 (300)
..+|+|+|+ |+||+.+++.+.. -++++. ++|+.. .....+. +.|+.. +.++++++ ..+|+||.
T Consensus 157 g~~v~IiG~-G~iG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~l~~~l------~~aDvVi~ 221 (300)
T 2rir_A 157 GSQVAVLGL-GRTGMTIARTFAA-LGANVK-VGARSS--AHLARIT----EMGLVPFHTDELKEHV------KDIDICIN 221 (300)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESSH--HHHHHHH----HTTCEEEEGGGHHHHS------TTCSEEEE
T ss_pred CCEEEEEcc-cHHHHHHHHHHHH-CCCEEE-EEECCH--HHHHHHH----HCCCeEEchhhHHHHh------hCCCEEEE
Confidence 478999998 9999999998875 467765 467542 1111111 123332 35788887 47999998
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
.+++....+.....++.|.-+|--..|-..-+ + +.+++.++.++..||++-++
T Consensus 222 ~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~---~-~~a~~~G~~~i~~pg~~g~v 274 (300)
T 2rir_A 222 TIPSMILNQTVLSSMTPKTLILDLASRPGGTD---F-KYAEKQGIKALLAPGLPGIV 274 (300)
T ss_dssp CCSSCCBCHHHHTTSCTTCEEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHH
T ss_pred CCChhhhCHHHHHhCCCCCEEEEEeCCCCCcC---H-HHHHHCCCEEEECCCCCCcH
Confidence 88764432222223344433332222211111 2 45566788888899988876
No 221
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.84 E-value=0.0036 Score=56.40 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=55.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCc-CCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
||+||.|.|++|.+|+.+++.+.+ .+.+++++...+. .. . +.+.. -..++. .+++++++ .++|+||.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~--~~-~-~~~~~~~~~Dl~-~~~~~~~~------~~~d~Vih 68 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRSIG--NK-A-INDYEYRVSDYT-LEDLINQL------NDVDAVVH 68 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHT------TTCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEeCCCC--cc-c-CCceEEEEcccc-HHHHHHhh------cCCCEEEE
Confidence 578999999999999999999886 4788887554311 11 1 10100 011222 33455555 37999998
Q ss_pred cCCc--------------hhHHHHHHHHHHcCCC-EE
Q 022250 113 FTDA--------------STVYDNVKQATAFGMR-SV 134 (300)
Q Consensus 113 fT~p--------------~~~~~~~~~al~~G~~-vV 134 (300)
+..+ ..+...++.|.+.|+. +|
T Consensus 69 ~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v 105 (311)
T 3m2p_A 69 LAATRGSQGKISEFHDNEILTQNLYDACYENNISNIV 105 (311)
T ss_dssp CCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 7632 1235667788888877 54
No 222
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.83 E-value=0.0028 Score=54.86 Aligned_cols=73 Identities=19% Similarity=0.157 Sum_probs=49.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||+|+|+ |.||+.+++.+.+ .+.++. ++|++. + .+ .++|+||.+.
T Consensus 19 ~~~I~iiG~-G~mG~~la~~l~~-~g~~V~-~~~~~~-------------~-----------~~------~~aD~vi~av 65 (209)
T 2raf_A 19 GMEITIFGK-GNMGQAIGHNFEI-AGHEVT-YYGSKD-------------Q-----------AT------TLGEIVIMAV 65 (209)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECTTC-------------C-----------CS------SCCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-CCCEEE-EEcCCH-------------H-----------Hh------ccCCEEEEcC
Confidence 579999997 9999999998875 467765 355432 0 11 4689999888
Q ss_pred CchhHHHHHHH---HHHcCCCEEEeCCCCC
Q 022250 115 DASTVYDNVKQ---ATAFGMRSVVYVPHIQ 141 (300)
Q Consensus 115 ~p~~~~~~~~~---al~~G~~vVigTTG~~ 141 (300)
++....+.+.. .++ +..+|.-++|++
T Consensus 66 ~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 66 PYPALAALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp CHHHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred CcHHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence 77666655543 344 665665566765
No 223
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.82 E-value=0.0038 Score=54.24 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=27.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
||++|.|.|++|.+|+.+++.+.+....++++..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~ 55 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFA 55 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEE
Confidence 3678999999999999999998865337777654
No 224
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=96.80 E-value=0.0016 Score=57.94 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=51.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+|||.|.|++|.+|+.+++.+.+ .+.++++.. +.. -|. .-.++++++++. .++|+||.+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~-r~~--~D~------------~d~~~~~~~~~~----~~~d~vi~~ 63 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNP-EEYDIYPFD-KKL--LDI------------TNISQVQQVVQE----IRPHIIIHC 63 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCT-TTEEEEEEC-TTT--SCT------------TCHHHHHHHHHH----HCCSEEEEC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHh-CCCEEEEec-ccc--cCC------------CCHHHHHHHHHh----cCCCEEEEC
Confidence 557999999999999999998875 478877643 321 111 112345566641 268999987
Q ss_pred CCchh------------------HHHHHHHHHHcCCCEE
Q 022250 114 TDAST------------------VYDNVKQATAFGMRSV 134 (300)
Q Consensus 114 T~p~~------------------~~~~~~~al~~G~~vV 134 (300)
..... ....++.|.++|+.+|
T Consensus 64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v 102 (287)
T 3sc6_A 64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLV 102 (287)
T ss_dssp CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEE
T ss_pred CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 53211 2345666777776665
No 225
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.78 E-value=0.0015 Score=60.25 Aligned_cols=88 Identities=14% Similarity=0.056 Sum_probs=59.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC--cceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
.++|+|+|+ |.||+.+++.+.+..+++-+.++|++. ..+..+. ..++ +..+++++++++ ++|+||-
T Consensus 135 ~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~--~~~~~l~---~~~~~~~~~~~~~~e~v~------~aDiVi~ 202 (312)
T 2i99_A 135 SEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTK--ENAEKFA---DTVQGEVRVCSSVQEAVA------GADVIIT 202 (312)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSH--HHHHHHH---HHSSSCCEECSSHHHHHT------TCSEEEE
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHH---HHhhCCeEEeCCHHHHHh------cCCEEEE
Confidence 468999998 999999999988765675567788653 2223333 1223 566789999884 6899997
Q ss_pred cCCchhHHHHHH-HHHHcCCCEEEe
Q 022250 113 FTDASTVYDNVK-QATAFGMRSVVY 136 (300)
Q Consensus 113 fT~p~~~~~~~~-~al~~G~~vVig 136 (300)
+|+ .. .+.+. ..++.|.+++..
T Consensus 203 atp-~~-~~v~~~~~l~~g~~vi~~ 225 (312)
T 2i99_A 203 VTL-AT-EPILFGEWVKPGAHINAV 225 (312)
T ss_dssp CCC-CS-SCCBCGGGSCTTCEEEEC
T ss_pred EeC-CC-CcccCHHHcCCCcEEEeC
Confidence 764 21 22221 356678777753
No 226
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.77 E-value=0.015 Score=56.86 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=67.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---------cCc---C----CCCcceecCHHHHH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---------DME---Q----PLEIPVMSDLTMVL 98 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---------g~~---~----~~gv~v~~dl~~~l 98 (300)
.|||+|+|+ |.||..++..+.+ .++++++ +|.+. ..+..+. |+. . ...+..++|+++++
T Consensus 8 ~~~I~VIG~-G~vG~~lA~~la~-~G~~V~~-~d~~~--~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~ 82 (478)
T 2y0c_A 8 SMNLTIIGS-GSVGLVTGACLAD-IGHDVFC-LDVDQ--AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV 82 (478)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred CceEEEECc-CHHHHHHHHHHHh-CCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence 489999997 9999999998874 5788665 56431 1111111 000 0 11245677888777
Q ss_pred hcccccCCccEEEEcCCc----------hhHHHHHHHHHH---cCCCEEEeCCCCCHHHHHHHHHHhhh--------CCC
Q 022250 99 GSISQSKARAVVIDFTDA----------STVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDK--------ASM 157 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p----------~~~~~~~~~al~---~G~~vVigTTG~~~e~~~~L~~~a~~--------~~i 157 (300)
. ++|+||.+.+. ..+.+.+....+ .+.-||..+ +..+...+++.+..++ ...
T Consensus 83 ~------~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~ 155 (478)
T 2y0c_A 83 A------HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMF 155 (478)
T ss_dssp H------HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCE
T ss_pred h------cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccE
Confidence 4 68999977543 455555544333 344454443 4322222222222211 235
Q ss_pred eEEEcCCCcH
Q 022250 158 GCLIAPTLSI 167 (300)
Q Consensus 158 ~iv~a~N~Si 167 (300)
+++++|.|--
T Consensus 156 ~v~~~Pe~~~ 165 (478)
T 2y0c_A 156 SVVSNPEFLK 165 (478)
T ss_dssp EEEECCCCCC
T ss_pred EEEEChhhhc
Confidence 7888888753
No 227
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.76 E-value=0.0029 Score=59.44 Aligned_cols=132 Identities=20% Similarity=0.199 Sum_probs=78.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC--------------CCcchhhh--hcCc---CCCCccee--c
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--------------VGEDIGMV--CDME---QPLEIPVM--S 92 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--------------~g~d~~~~--~g~~---~~~gv~v~--~ 92 (300)
.|+||+|+|. ||+||.+.+.+.+.+ ++++++-|+.. .|+=-+++ .|-. ....+.++ .
T Consensus 6 ~~~kvgInGF-GRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 6 RELTVGINGF-GRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeeEEEEECC-ChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 4799999998 999999999888765 99999887421 01100000 0000 00123333 2
Q ss_pred CHHHHHhcccc-cCCccEEEEcCCchhHHHHHHHHHHcCC-CEEEeCC---------CCCHHHHHHHHHHhhhCCCeEEE
Q 022250 93 DLTMVLGSISQ-SKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVP---------HIQLETVSALSAFCDKASMGCLI 161 (300)
Q Consensus 93 dl~~~l~~~~~-~~~~DVVIDfT~p~~~~~~~~~al~~G~-~vVigTT---------G~~~e~~~~L~~~a~~~~i~iv~ 161 (300)
|++++- | +.++|+|++.|-.....+.+...++.|. .|||-.| |.+.+.++. .+ -.++
T Consensus 84 dp~~i~----W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~-----~~--~~II- 151 (346)
T 3h9e_O 84 EPKQIP----WRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP-----GS--MNIV- 151 (346)
T ss_dssp SGGGCC----GGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCT-----TT--CSEE-
T ss_pred ChhhCC----cccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCc-----cc--CCEE-
Confidence 333321 1 1278999998888888899999999995 4666544 344433211 01 2444
Q ss_pred cCCCcHHHHHHHHHHHHhc
Q 022250 162 APTLSIGSILLQQAAISAS 180 (300)
Q Consensus 162 a~N~SiGv~ll~~~a~~~~ 180 (300)
+|=|--.|-|.-+++.+-
T Consensus 152 -SNasCTTn~Lap~lkvL~ 169 (346)
T 3h9e_O 152 -SNASCTTNCLAPLAKVIH 169 (346)
T ss_dssp -ECCCHHHHHHHHHHHHHH
T ss_pred -ECCcchhhhHHHHHHHHH
Confidence 666667776666666654
No 228
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.71 E-value=0.0052 Score=52.31 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=27.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|||.|.|++|.+|+.+++.+.+. +.+++++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEe
Confidence 58999999999999999998864 788887653
No 229
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.68 E-value=0.0061 Score=50.90 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=27.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+||.|.|++|.+|+.+++.+.+. +.+++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEe
Confidence 68999999999999999998864 788887543
No 230
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=96.68 E-value=0.0031 Score=58.67 Aligned_cols=58 Identities=16% Similarity=0.149 Sum_probs=29.0
Q ss_pred eccccCcccccccceeeEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEE
Q 022250 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAI 67 (300)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~v 67 (300)
|.--|..||-++..+.-.|.......+++|.|.|++|.+|+.+++.+.+. + .+++++.
T Consensus 6 ~~~~~~~~~~~~~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~ 64 (377)
T 2q1s_A 6 HHHHHSSGLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLEL-GVNQVHVVD 64 (377)
T ss_dssp --------------------CCGGGTTCEEEEETTTSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred ccccccCCcccccccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHc-CCceEEEEE
Confidence 43344456666665654443222223579999999999999999998864 6 8888753
No 231
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.66 E-value=0.0099 Score=47.37 Aligned_cols=125 Identities=11% Similarity=0.148 Sum_probs=69.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-e---cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVV 110 (300)
|.+|.|+|+ |++|+.+++.+.+ .+.+++. +|.+. .....+. +.++.+ + .+.+.+.+ . ...++|+|
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~-~g~~V~~-id~~~--~~~~~~~----~~~~~~~~gd~~~~~~l~~-~-~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTA-AGKKVLA-VDKSK--EKIELLE----DEGFDAVIADPTDESFYRS-L-DLEGVSAV 74 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEECCTTCHHHHHH-S-CCTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-CCCeEEE-EECCH--HHHHHHH----HCCCcEEECCCCCHHHHHh-C-CcccCCEE
Confidence 568999998 9999999999875 4777764 56532 1112221 123322 1 23322221 0 01468999
Q ss_pred EEcCCchhH-HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH
Q 022250 111 IDFTDASTV-YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (300)
Q Consensus 111 IDfT~p~~~-~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~ 175 (300)
|..+..+.. ...+..+.+.+...|+... -+++..+.| ++.|+-.++.|....|-.+...+
T Consensus 75 i~~~~~~~~n~~~~~~a~~~~~~~iia~~-~~~~~~~~l----~~~G~~~vi~p~~~~~~~l~~~i 135 (141)
T 3llv_A 75 LITGSDDEFNLKILKALRSVSDVYAIVRV-SSPKKKEEF----EEAGANLVVLVADAVKQAFMDKI 135 (141)
T ss_dssp EECCSCHHHHHHHHHHHHHHCCCCEEEEE-SCGGGHHHH----HHTTCSEEEEHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHhCCceEEEEE-cChhHHHHH----HHcCCCEEECHHHHHHHHHHHHH
Confidence 876653333 4444555565644444332 222333344 34567778888877776555443
No 232
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=96.64 E-value=0.021 Score=54.14 Aligned_cols=143 Identities=13% Similarity=0.151 Sum_probs=92.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHh---c-----------------CCcEEEEEEec--CCCCcchhhhh----cCcCC--C
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTK---A-----------------RGMEVAGAIDS--HSVGEDIGMVC----DMEQP--L 86 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~---~-----------------~~~eLvg~vd~--~~~g~d~~~~~----g~~~~--~ 86 (300)
|+||.|+|. |...+.+++-+.. . .|.|+|+++|- .+.|+|+.+.+ +.-.+ .
T Consensus 13 ~~~~~~~Gv-Gn~ASslvqGie~yk~~~~~~~Gl~~~~~~~y~~~DievvaafDVd~~KVGkdl~eai~~~pn~Vp~~l~ 91 (394)
T 1vjp_A 13 MVKVLILGQ-GYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSLTS 91 (394)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCCSS
T ss_pred eeeeEEEEe-hHHHHHHHHHHHHHHcCCCCCccccchhccCCCcCceEEEEEEeccccccCCcHHHHHhhCcCCCCcccC
Confidence 799999998 9999999886632 1 12699999984 45777775432 00011 1
Q ss_pred Cccee-----c----------------CHHHHHh---cccccCCccEEEEcC------Cch------------------h
Q 022250 87 EIPVM-----S----------------DLTMVLG---SISQSKARAVVIDFT------DAS------------------T 118 (300)
Q Consensus 87 gv~v~-----~----------------dl~~~l~---~~~~~~~~DVVIDfT------~p~------------------~ 118 (300)
++.+. + +.++..+ +.+++.++||||.+. +.. +
T Consensus 92 ~V~V~~G~~ldg~~~~~~~~~~~~e~~s~~e~v~~vv~~lk~~~~DVvIn~~STE~~~p~gs~~~l~~ai~~~~~~~i~a 171 (394)
T 1vjp_A 92 DPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLTA 171 (394)
T ss_dssp CCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHHHHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTCCH
T ss_pred CCEEEeccccCcccccchhhhccccccchhhHHHHHHHHHHHcCCCEEEEecCccCCCCCCCHHHHHHHHhcCCCCccCh
Confidence 22211 0 1122111 112346799999986 222 3
Q ss_pred HHHHHHHHHH-----cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH-HHHhc
Q 022250 119 VYDNVKQATA-----FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA-AISAS 180 (300)
Q Consensus 119 ~~~~~~~al~-----~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~-a~~~~ 180 (300)
..-++..|++ .|++.|-++|.+.. ....+.++++++|+| +..-.|..|..++... +..+.
T Consensus 172 S~~YA~AAl~~~~~~aG~~fVN~~P~~ia-~~P~~~ela~~~gvp-i~GDD~ktGqT~lks~La~~l~ 237 (394)
T 1vjp_A 172 TQVYAYAAALYANKRGGAAFVNVIPTFIA-NDPAFVELAKENNLV-VFGDDGATGATPFTADVLSHLA 237 (394)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECSSSCST-TCHHHHHHHHHTTEE-EECSSBSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccCCcceEecCCcccc-CCHHHHHHHHHcCCC-EEccccCCCCCchHHHHHHHHH
Confidence 4456788999 99999999996542 123578888999988 6677799999988764 44444
No 233
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.62 E-value=0.017 Score=55.07 Aligned_cols=115 Identities=14% Similarity=0.169 Sum_probs=64.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcC--------------CCCcceecCHHHHHhcc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ--------------PLEIPVMSDLTMVLGSI 101 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~--------------~~gv~v~~dl~~~l~~~ 101 (300)
|||+|+|+ |.||..++..+.+ ++++++ +|++. ..+..+..... ...+..++|+++++.
T Consensus 1 MkI~VIG~-G~vG~~~A~~La~--G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~-- 72 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLSL--QNEVTI-VDILP--SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK-- 72 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT--TSEEEE-ECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH--
T ss_pred CEEEEECC-CHHHHHHHHHHhC--CCEEEE-EECCH--HHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc--
Confidence 58999998 9999999998875 788765 56432 11111110000 112345677777764
Q ss_pred cccCCccEEEEcCCch-----------hHHHHHHHH--HHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 102 SQSKARAVVIDFTDAS-----------TVYDNVKQA--TAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 102 ~~~~~~DVVIDfT~p~-----------~~~~~~~~a--l~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
++|+||.+.++. .+.+.+... +..|.-+|..+| +... .+++.+...+. +++++|.|.
T Consensus 73 ----~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~--~~~l~~~~~~~--~v~~~Pe~~ 143 (402)
T 1dlj_A 73 ----EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGF--ITEMRQKFQTD--RIIFSPEFL 143 (402)
T ss_dssp ----HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTH--HHHHHHHTTCS--CEEECCCCC
T ss_pred ----CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccH--HHHHHHHhCCC--eEEECCccc
Confidence 689999777544 244444333 344554554344 4432 23444444432 677777653
No 234
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.61 E-value=0.0046 Score=55.89 Aligned_cols=128 Identities=14% Similarity=0.129 Sum_probs=71.6
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCc---chhhhhcCcCCCCccee-------cCHHHHHhccc
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE---DIGMVCDMEQPLEIPVM-------SDLTMVLGSIS 102 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~---d~~~~~g~~~~~gv~v~-------~dl~~~l~~~~ 102 (300)
++|++|.|.|++|.+|+.+++.+.+. +.++.++......+. ....+..+ ...++.+. +++.+++
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~v~~v~~D~~d~~~l~~a~---- 75 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEF-RSMGVTIIEGEMEEHEKMVSVL---- 75 (321)
T ss_dssp --CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHH----
T ss_pred CcccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHh-hcCCcEEEEecCCCHHHHHHHH----
Confidence 35688999999999999999998864 678776543220110 01000000 01122221 2345555
Q ss_pred ccCCccEEEEcCCc---hhHHHHHHHHHHcC-CCEEEeCC-CCC--------H-----HHHHHHHHHhhhCCCeEE-EcC
Q 022250 103 QSKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQ--------L-----ETVSALSAFCDKASMGCL-IAP 163 (300)
Q Consensus 103 ~~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVigTT-G~~--------~-----e~~~~L~~~a~~~~i~iv-~a~ 163 (300)
..+|+||.+..+ ......+..|.++| +.-++-+. |.+ + .....++++.++.++++. +.|
T Consensus 76 --~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp 153 (321)
T 3c1o_A 76 --KQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSA 153 (321)
T ss_dssp --TTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEEC
T ss_pred --cCCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 369999988753 45577788888888 65554333 421 1 012345566665555433 456
Q ss_pred CCcHH
Q 022250 164 TLSIG 168 (300)
Q Consensus 164 N~SiG 168 (300)
|+=.|
T Consensus 154 ~~~~~ 158 (321)
T 3c1o_A 154 NCFGA 158 (321)
T ss_dssp CEEHH
T ss_pred ceecc
Confidence 66444
No 235
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.58 E-value=0.017 Score=45.44 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=70.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-ee---cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VM---SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~---~dl~~~l~~~~~~~~~DVV 110 (300)
|.+|+|+|+ |.+|+.+++.+.+. +.+++ ++|++. .....+ ...+.. +. .+.+.+.+ . ...++|+|
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~-g~~v~-~~d~~~--~~~~~~----~~~~~~~~~~d~~~~~~l~~-~-~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRM-GHEVL-AVDINE--EKVNAY----ASYATHAVIANATEENELLS-L-GIRNFEYV 74 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHT-TCCCE-EEESCH--HHHHTT----TTTCSEEEECCTTCHHHHHT-T-TGGGCSEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHC-CCEEE-EEeCCH--HHHHHH----HHhCCEEEEeCCCCHHHHHh-c-CCCCCCEE
Confidence 357999998 99999999988754 56655 456432 111111 112222 11 23333221 0 01368999
Q ss_pred EEcCCch--hHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHH
Q 022250 111 IDFTDAS--TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAA 176 (300)
Q Consensus 111 IDfT~p~--~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a 176 (300)
|.++..+ .....+..+.+.+.+-++.... +.+..+.+. +.|+..++.|....+-.+...+.
T Consensus 75 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~-~~~~~~~l~----~~g~~~vi~p~~~~~~~l~~~~~ 137 (144)
T 2hmt_A 75 IVAIGANIQASTLTTLLLKELDIPNIWVKAQ-NYYHHKVLE----KIGADRIIHPEKDMGVKIAQSLS 137 (144)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEECC-SHHHHHHHH----HHTCSEEECHHHHHHHHHHHHHH
T ss_pred EECCCCchHHHHHHHHHHHHcCCCeEEEEeC-CHHHHHHHH----HcCCCEEECccHHHHHHHHHHHh
Confidence 9887643 3345566677778765554321 223323333 35567788888777766655544
No 236
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.58 E-value=0.008 Score=54.49 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=27.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+|||.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r 45 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRA-AGHDLVLIHR 45 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEec
Confidence 46999999999999999999886 4788887553
No 237
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.53 E-value=0.0066 Score=54.32 Aligned_cols=125 Identities=13% Similarity=0.138 Sum_probs=70.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCc----chhhhhcCcCCCCccee-------cCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE----DIGMVCDMEQPLEIPVM-------SDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~----d~~~~~g~~~~~gv~v~-------~dl~~~l~~~~~ 103 (300)
|+||.|.|++|.+|+.+++.+.+. +.++++. +++.... ....+..+ ...++.+. +++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l-~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~---- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLL-VRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK---- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEE-CCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEE-ECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc----
Confidence 578999999999999999998864 6777654 4332111 00000000 01233221 23445553
Q ss_pred cCCccEEEEcCCc---hhHHHHHHHHHHcC-CCEEEeCC-CCC--------H-----HHHHHHHHHhhhCCCeEE-EcCC
Q 022250 104 SKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQ--------L-----ETVSALSAFCDKASMGCL-IAPT 164 (300)
Q Consensus 104 ~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVigTT-G~~--------~-----e~~~~L~~~a~~~~i~iv-~a~N 164 (300)
++|+||.++.+ ......+..|.++| +.-++-++ |.+ + .....++++.++.++++. +.|+
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~ 154 (308)
T 1qyc_A 77 --NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 154 (308)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred --CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 68999988754 34567778888888 66555333 411 1 112345566666565543 4566
Q ss_pred CcHH
Q 022250 165 LSIG 168 (300)
Q Consensus 165 ~SiG 168 (300)
+=.|
T Consensus 155 ~~~~ 158 (308)
T 1qyc_A 155 CFAG 158 (308)
T ss_dssp EEHH
T ss_pred eecc
Confidence 5444
No 238
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=96.52 E-value=0.00051 Score=64.70 Aligned_cols=94 Identities=14% Similarity=0.071 Sum_probs=61.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-cCCCC--cceecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-EQPLE--IPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~-~~~~g--v~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
..+|+|+|+ |.||+.+++.+....+.+-+.++|++. ..+..++.. ....+ +.+++++++++. ++|+||
T Consensus 129 ~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~--~~a~~la~~~~~~~g~~~~~~~~~~eav~------~aDiVi 199 (350)
T 1x7d_A 129 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDP--LATAKLIANLKEYSGLTIRRASSVAEAVK------GVDIIT 199 (350)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHTTCTTCEEEECSSHHHHHT------TCSEEE
T ss_pred CCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHHHHHHhccCceEEEeCCHHHHHh------cCCEEE
Confidence 368999997 999999999886656677788888753 222222210 01114 445789999984 789999
Q ss_pred EcCCchhHHHHH-HHHHHcCCCEEEeC
Q 022250 112 DFTDASTVYDNV-KQATAFGMRSVVYV 137 (300)
Q Consensus 112 DfT~p~~~~~~~-~~al~~G~~vVigT 137 (300)
-+|+...+.+.+ ...++.|++++.-.
T Consensus 200 ~aTps~~~~pvl~~~~l~~G~~V~~vg 226 (350)
T 1x7d_A 200 TVTADKAYATIITPDMLEPGMHLNAVG 226 (350)
T ss_dssp ECCCCSSEEEEECGGGCCTTCEEEECS
T ss_pred EeccCCCCCceecHHHcCCCCEEEECC
Confidence 887653211111 24567899888543
No 239
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.52 E-value=0.0051 Score=54.86 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=25.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
.||.|+|+ |.+|+.+++.+.. .++.=+.++|.+
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~-~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLAS-AGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-HTCSEEEEECCC
T ss_pred CeEEEEee-CHHHHHHHHHHHH-cCCCeEEEEcCC
Confidence 68999998 9999999999875 455334467753
No 240
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.49 E-value=0.0053 Score=55.83 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=69.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVID 112 (300)
..+|+|+|+ |+||+.+++.+.. -++++. ++|+.. .....+. +.|+.. ++++++++ ..+|+||.
T Consensus 155 g~~v~IiG~-G~iG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~l~~~l------~~aDvVi~ 219 (293)
T 3d4o_A 155 GANVAVLGL-GRVGMSVARKFAA-LGAKVK-VGARES--DLLARIA----EMGMEPFHISKAAQEL------RDVDVCIN 219 (293)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESSH--HHHHHHH----HTTSEEEEGGGHHHHT------TTCSEEEE
T ss_pred CCEEEEEee-CHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHH----HCCCeecChhhHHHHh------cCCCEEEE
Confidence 368999997 9999999998874 467765 466542 1111111 233333 35788887 47999998
Q ss_pred cCCchhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
.+++....+.....++.|.-+|--..|-..-. + +.+++.|+.++..||+.-.+
T Consensus 220 ~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~---~-~~a~~~Gv~~~~~~~l~~~v 272 (293)
T 3d4o_A 220 TIPALVVTANVLAEMPSHTFVIDLASKPGGTD---F-RYAEKRGIKALLVPGLPGIV 272 (293)
T ss_dssp CCSSCCBCHHHHHHSCTTCEEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHH
T ss_pred CCChHHhCHHHHHhcCCCCEEEEecCCCCCCC---H-HHHHHCCCEEEECCCCCccc
Confidence 88654332322333444443332222211111 2 44566778888889988776
No 241
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.46 E-value=0.0072 Score=56.04 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=57.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhh-------------hcCcCC--------CCcceecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMV-------------CDMEQP--------LEIPVMSD 93 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~-------------~g~~~~--------~gv~v~~d 93 (300)
+.||+|+|+ |.||..++..+.. .+++++. +|++. ..+... .|.... ..+..++|
T Consensus 6 ~~kI~vIGa-G~MG~~iA~~la~-~G~~V~l-~d~~~--~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~ 80 (319)
T 2dpo_A 6 AGDVLIVGS-GLVGRSWAMLFAS-GGFRVKL-YDIEP--RQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCCEEE-ECSCH--HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CceEEEEee-CHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCC
Confidence 478999998 9999999998875 5787654 67542 111111 111000 02456789
Q ss_pred HHHHHhcccccCCccEEEEcCCchh-H-HHHHHHH---HHcCCCEEEeCCCCCHHH
Q 022250 94 LTMVLGSISQSKARAVVIDFTDAST-V-YDNVKQA---TAFGMRSVVYVPHIQLET 144 (300)
Q Consensus 94 l~~~l~~~~~~~~~DVVIDfT~p~~-~-~~~~~~a---l~~G~~vVigTTG~~~e~ 144 (300)
+++++ .++|+||.+.+.+. . .+.+... +..+.-++.-|++++..+
T Consensus 81 ~~eav------~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~ 130 (319)
T 2dpo_A 81 LAEAV------EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK 130 (319)
T ss_dssp HHHHT------TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH
T ss_pred HHHHH------hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHH
Confidence 98887 47999998775432 2 2333332 223333334556777643
No 242
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=96.43 E-value=0.022 Score=54.42 Aligned_cols=143 Identities=12% Similarity=0.150 Sum_probs=85.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHh--------------------cCCcEEEEEEec--CCCCcchhhhhcC-----c---
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTK--------------------ARGMEVAGAIDS--HSVGEDIGMVCDM-----E--- 83 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~--------------------~~~~eLvg~vd~--~~~g~d~~~~~g~-----~--- 83 (300)
.||||+|+|. |..++.+++-+.. .+|.+++|++|. .+.|+++.+.+-. .
T Consensus 12 ~mIrVaIvGv-GnvASTlvqGv~~~r~g~~~~~G~p~~~~~p~~~~Di~vvgg~DId~~kvgk~l~eAi~~~~n~~~~~~ 90 (394)
T 3cin_A 12 HMVKVLILGQ-GYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSLT 90 (394)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCCS
T ss_pred ceeEEEEecC-CHHHHHHHHHHHHHHcCCCCCccccccccCCCCCCCcEEEEEecCCcchhHHHHHHHHhhchhcccccc
Confidence 3899999998 9999999887742 135689999994 3456665432200 0
Q ss_pred --CC----------C-------Cccee----cCHHHHHhcccccCCccEEEEcCC------ch-----------------
Q 022250 84 --QP----------L-------EIPVM----SDLTMVLGSISQSKARAVVIDFTD------AS----------------- 117 (300)
Q Consensus 84 --~~----------~-------gv~v~----~dl~~~l~~~~~~~~~DVVIDfT~------p~----------------- 117 (300)
.+ . +.... ++++++.++ .++.+.||||...+ +.
T Consensus 91 ~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~k~-~~~~~~~Vvvn~asTE~ylpvgs~~~~~~a~~~~~~~~i 169 (394)
T 3cin_A 91 SDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKE-WTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERL 169 (394)
T ss_dssp SCCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHH-HHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTC
T ss_pred CccccccCcccccccCcCccccchhhhhhHHHhHHHHHHH-hhhccceeEeeecccccCCCCCCHHHHHHHhhccccccC
Confidence 00 0 00000 112222211 11246789998432 11
Q ss_pred -hHHHHHHHHH-----HcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHH-HHHhc
Q 022250 118 -TVYDNVKQAT-----AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA-AISAS 180 (300)
Q Consensus 118 -~~~~~~~~al-----~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~-a~~~~ 180 (300)
+..-++..|+ +.|++.|-++|-+... ...+.++++++|+| +..--|-.|..++... +..+.
T Consensus 170 ~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~-~P~~~ela~~~gvp-i~GdD~ktG~T~~k~~L~~~l~ 237 (394)
T 3cin_A 170 TATQVYAYAAALYANKRGGAAFVNVIPTFIAN-DPAFVELAKENNLV-VFGDDGATGATPFTADVLSHLA 237 (394)
T ss_dssp CHHHHHHHHHHHHHHHHTCEEEEECSSSCSTT-CHHHHHHHHHTTEE-EECSSBSCSHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHhhhhhcCCceecCCCccccC-cHHHHHHHHHcCCc-EecccccccchhHHHHHHHHHH
Confidence 2222334444 8999999999966532 24578889999998 4566799999987653 44443
No 243
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.40 E-value=0.0098 Score=53.28 Aligned_cols=92 Identities=21% Similarity=0.217 Sum_probs=55.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCc---chhhhhcCcCCCCccee----c---CHHHHHhccccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE---DIGMVCDMEQPLEIPVM----S---DLTMVLGSISQS 104 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~---d~~~~~g~~~~~gv~v~----~---dl~~~l~~~~~~ 104 (300)
|++|.|.|+||.+|+.+++.+.+. +.++++.. ++.... ....+..+ ...++.+. + ++.+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~-R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~------ 74 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLF-RPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDAL------ 74 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEEC-CSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHH------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEE-CCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHH------
Confidence 578999999999999999998864 67877644 332110 11000000 01233221 2 344555
Q ss_pred CCccEEEEcCCc-------hhHHHHHHHHHHcC-CCEEE
Q 022250 105 KARAVVIDFTDA-------STVYDNVKQATAFG-MRSVV 135 (300)
Q Consensus 105 ~~~DVVIDfT~p-------~~~~~~~~~al~~G-~~vVi 135 (300)
.++|+||.++.+ ......+..|.++| +.-++
T Consensus 75 ~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 75 KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp TTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred hCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 378999987643 34566778888888 65444
No 244
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.40 E-value=0.0013 Score=58.76 Aligned_cols=105 Identities=11% Similarity=0.079 Sum_probs=61.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCCc
Q 022250 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDA 116 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~p 116 (300)
||+|+|+ |+||+.+++.+.+. +++ +.+++++. ..+..++ ..++.. +++++++ . ++|+||..|++
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~-g~~-v~v~~r~~--~~~~~l~---~~~~~~-~~~~~~~-~------~~Divi~~tp~ 181 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREA-GLE-VWVWNRTP--QRALALA---EEFGLR-AVPLEKA-R------EARLLVNATRV 181 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHT-TCC-EEEECSSH--HHHHHHH---HHHTCE-ECCGGGG-G------GCSEEEECSST
T ss_pred eEEEECC-cHHHHHHHHHHHHC-CCE-EEEEECCH--HHHHHHH---HHhccc-hhhHhhc-c------CCCEEEEccCC
Confidence 8999998 99999999998764 554 45677642 2222222 122323 4566666 4 68999988876
Q ss_pred hhHH---HHH-HHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE
Q 022250 117 STVY---DNV-KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (300)
Q Consensus 117 ~~~~---~~~-~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv 160 (300)
..+. ..+ ..+++.|..++ -.. .++.+. +|.+.+++.++.++
T Consensus 182 ~~~~~~~~~l~~~~l~~g~~vi-D~~-~~p~~t-~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 182 GLEDPSASPLPAELFPEEGAAV-DLV-YRPLWT-RFLREAKAKGLKVQ 226 (263)
T ss_dssp TTTCTTCCSSCGGGSCSSSEEE-ESC-CSSSSC-HHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCCHHHcCCCCEEE-Eee-cCCccc-HHHHHHHHCcCEEE
Confidence 6321 111 23455666444 322 222222 36677777777644
No 245
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.35 E-value=0.024 Score=52.65 Aligned_cols=73 Identities=18% Similarity=0.147 Sum_probs=46.4
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhh-cCcCCCCcceecCHHHHHhcccccC
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVC-DMEQPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~~~~~-g~~~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
++++||+|+|+ |.||..++..+... ++ + +..+|.+.. + .+..... -......+..++|+++.+ .
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~-g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~------~ 77 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALR-ELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL------T 77 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHH-TCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH------T
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHh------C
Confidence 34689999998 99999999988764 44 7 667886531 1 1111100 000122345568998777 4
Q ss_pred CccEEEEcC
Q 022250 106 ARAVVIDFT 114 (300)
Q Consensus 106 ~~DVVIDfT 114 (300)
++|+||...
T Consensus 78 ~aDiVi~a~ 86 (331)
T 1pzg_A 78 GADCVIVTA 86 (331)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcc
Confidence 789998654
No 246
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.35 E-value=0.0054 Score=55.35 Aligned_cols=107 Identities=15% Similarity=0.123 Sum_probs=64.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..||+|+|+ |.||+.++..+.+. +++ +.+++++. ..+.+++ ..+++.+++++++++. ++|+||..|
T Consensus 129 ~~~v~iiGa-G~~g~aia~~L~~~-g~~-V~v~~r~~--~~~~~l~---~~~g~~~~~~~~~~~~------~aDiVi~at 194 (275)
T 2hk9_A 129 EKSILVLGA-GGASRAVIYALVKE-GAK-VFLWNRTK--EKAIKLA---QKFPLEVVNSPEEVID------KVQVIVNTT 194 (275)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHH-TCE-EEEECSSH--HHHHHHT---TTSCEEECSCGGGTGG------GCSEEEECS
T ss_pred CCEEEEECc-hHHHHHHHHHHHHc-CCE-EEEEECCH--HHHHHHH---HHcCCeeehhHHhhhc------CCCEEEEeC
Confidence 368999998 99999999998765 565 45677642 2233333 3456666667877773 789999888
Q ss_pred CchhHH---HHH-HHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEE
Q 022250 115 DASTVY---DNV-KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (300)
Q Consensus 115 ~p~~~~---~~~-~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv 160 (300)
++.... +.+ ...++.|.-++--.+ .. ..+.+.+++.++.++
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~-~~----t~ll~~a~~~g~~~v 239 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY-KE----TKLLKKAKEKGAKLL 239 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS-SC----CHHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC-Ch----HHHHHHHHHCcCEEE
Confidence 765421 112 123444554443223 21 224555666666544
No 247
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=96.34 E-value=0.013 Score=53.29 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=28.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (300)
|++|.|.|++|.+|+.+++.+.+.. +.++++..
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~ 37 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD 37 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5799999999999999999988653 78888754
No 248
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.32 E-value=0.00063 Score=58.90 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=54.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
+.+||+|+|+ |+||+.+++.+.+ .++++. +++++.. ...+. ..++... ++++++ ..+|+||-+
T Consensus 18 ~~~~I~iIG~-G~mG~~la~~L~~-~G~~V~-~~~r~~~---~~~~~----~~g~~~~-~~~~~~------~~aDvVila 80 (201)
T 2yjz_A 18 KQGVVCIFGT-GDFGKSLGLKMLQ-CGYSVV-FGSRNPQ---VSSLL----PRGAEVL-CYSEAA------SRSDVIVLA 80 (201)
Confidence 3578999997 9999999998874 456655 3565421 11121 2345544 666766 378999977
Q ss_pred CCchhHHHHHHHH-HHcCCCEEEeCCCCC
Q 022250 114 TDASTVYDNVKQA-TAFGMRSVVYVPHIQ 141 (300)
Q Consensus 114 T~p~~~~~~~~~a-l~~G~~vVigTTG~~ 141 (300)
+.+....+.+... ...+.-+|.-++|.+
T Consensus 81 v~~~~~~~v~~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 81 VHREHYDFLAELADSLKGRVLIDVSNNQK 109 (201)
Confidence 7766544433211 123444454455764
No 249
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.30 E-value=0.004 Score=57.21 Aligned_cols=117 Identities=14% Similarity=0.119 Sum_probs=66.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCc--C-CC------CcceecCHHHHHhccccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME--Q-PL------EIPVMSDLTMVLGSISQS 104 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~--~-~~------gv~v~~dl~~~l~~~~~~ 104 (300)
|+|||+|+|+ |.||..++..+.+ .+.++.. ++++.. +.+.+ .|+. . .. .+.+++|++++.
T Consensus 1 M~mkI~IiGa-GaiG~~~a~~L~~-~g~~V~~-~~r~~~-~~i~~-~Gl~~~~~~~g~~~~~~~~~~~~~~~~~------ 69 (320)
T 3i83_A 1 MSLNILVIGT-GAIGSFYGALLAK-TGHCVSV-VSRSDY-ETVKA-KGIRIRSATLGDYTFRPAAVVRSAAELE------ 69 (320)
T ss_dssp --CEEEEESC-CHHHHHHHHHHHH-TTCEEEE-ECSTTH-HHHHH-HCEEEEETTTCCEEECCSCEESCGGGCS------
T ss_pred CCCEEEEECc-CHHHHHHHHHHHh-CCCeEEE-EeCChH-HHHHh-CCcEEeecCCCcEEEeeeeeECCHHHcC------
Confidence 5689999998 9999999998875 4667654 555431 11111 0100 0 01 234567777664
Q ss_pred CCccEEEEcCCchhHHHHHHHH---HHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCC
Q 022250 105 KARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~~~~~~~a---l~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~ 165 (300)
.++|+||-++.+....+.+... +..+..+|.-.-|+..+ +.|.+.... -+++.++++
T Consensus 70 ~~~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~--~~vl~g~~~ 129 (320)
T 3i83_A 70 TKPDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE--PEVAAAFPD--NEVISGLAF 129 (320)
T ss_dssp SCCSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS--HHHHHHSTT--SCEEEEEEE
T ss_pred CCCCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH--HHHHHHCCC--CcEEEEEEE
Confidence 3789999888766655544433 33455667666788632 234444333 244554443
No 250
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.28 E-value=0.012 Score=49.66 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=27.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|||.|.|++|.+|+.+++.+.+ .+.++++...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~-~g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN-RGHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHh-CCCEEEEEEc
Confidence 5899999999999999999886 4788887553
No 251
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.27 E-value=0.016 Score=54.14 Aligned_cols=102 Identities=9% Similarity=-0.011 Sum_probs=60.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.++|+|+|+ |+||+.+++.+.. -++++.+ +|+... . ..++..+.++++++. .+|+|+...
T Consensus 164 g~~vgIIG~-G~iG~~vA~~l~~-~G~~V~~-~dr~~~--~---------~~g~~~~~~l~ell~------~aDvVil~v 223 (333)
T 3ba1_A 164 GKRVGIIGL-GRIGLAVAERAEA-FDCPISY-FSRSKK--P---------NTNYTYYGSVVELAS------NSDILVVAC 223 (333)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHT-TTCCEEE-ECSSCC--T---------TCCSEEESCHHHHHH------TCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-CCCEEEE-ECCCch--h---------ccCceecCCHHHHHh------cCCEEEEec
Confidence 468999998 9999999998874 5788654 665431 1 113445678999885 789999777
Q ss_pred Cchh-HHH----HHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCC
Q 022250 115 DAST-VYD----NVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (300)
Q Consensus 115 ~p~~-~~~----~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i 157 (300)
++.. +.. .....++.|.-+|...+|...+ .++|.++.++.++
T Consensus 224 P~~~~t~~li~~~~l~~mk~gailIn~srG~~vd-~~aL~~aL~~g~i 270 (333)
T 3ba1_A 224 PLTPETTHIINREVIDALGPKGVLINIGRGPHVD-EPELVSALVEGRL 270 (333)
T ss_dssp CCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBC-HHHHHHHHHHTSS
T ss_pred CCChHHHHHhhHHHHhcCCCCCEEEECCCCchhC-HHHHHHHHHcCCC
Confidence 6432 211 1223444554444333443221 2345555555434
No 252
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.25 E-value=0.0095 Score=51.28 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=29.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (300)
++++|.|.|++|.+|+.+++.+.+.. +.++++..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 46789999999999999999998765 78888754
No 253
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.23 E-value=0.0071 Score=56.34 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=60.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.++|+|+|+ |+||+.+++.+.. -+++++ ++|+... .+ .. ...|+.. .++++++. .+|+|+...
T Consensus 146 g~~vgIIG~-G~iG~~vA~~l~~-~G~~V~-~~d~~~~-~~---~~---~~~g~~~-~~l~e~l~------~aDiVil~v 208 (333)
T 2d0i_A 146 GKKVGILGM-GAIGKAIARRLIP-FGVKLY-YWSRHRK-VN---VE---KELKARY-MDIDELLE------KSDIVILAL 208 (333)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGG-GTCEEE-EECSSCC-HH---HH---HHHTEEE-CCHHHHHH------HCSEEEECC
T ss_pred cCEEEEEcc-CHHHHHHHHHHHH-CCCEEE-EECCCcc-hh---hh---hhcCcee-cCHHHHHh------hCCEEEEcC
Confidence 478999998 9999999998874 578875 4676431 11 11 1234433 48888884 789999877
Q ss_pred Cch-hH----HHHHHHHHHcCCCEEEeCC-CCCHHHHHHHHHHhhhCCCe
Q 022250 115 DAS-TV----YDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMG 158 (300)
Q Consensus 115 ~p~-~~----~~~~~~al~~G~~vVigTT-G~~~e~~~~L~~~a~~~~i~ 158 (300)
++. .+ .+.....++.| +++-+. |..-+ .++|.++.++..+.
T Consensus 209 p~~~~t~~~i~~~~~~~mk~g--ilin~srg~~vd-~~aL~~aL~~~~i~ 255 (333)
T 2d0i_A 209 PLTRDTYHIINEERVKKLEGK--YLVNIGRGALVD-EKAVTEAIKQGKLK 255 (333)
T ss_dssp CCCTTTTTSBCHHHHHHTBTC--EEEECSCGGGBC-HHHHHHHHHTTCBC
T ss_pred CCChHHHHHhCHHHHhhCCCC--EEEECCCCcccC-HHHHHHHHHcCCce
Confidence 654 22 12223345556 555443 42211 23455555554443
No 254
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.21 E-value=0.023 Score=48.97 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=28.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
.+||.|.|++|.+|+.+++.+.+ .+.++++...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN-KGHEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHh-CCCeEEEEEC
Confidence 47999999999999999999886 5788887553
No 255
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=96.19 E-value=0.038 Score=50.74 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=29.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd 68 (300)
+++|.|.|++|.+|+.+++.+.+. .+.++++...
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 579999999999999999999864 6899887653
No 256
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.18 E-value=0.019 Score=50.99 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=56.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCC----cce-ecCHHHHHhcccccCCccEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE----IPV-MSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~g----v~v-~~dl~~~l~~~~~~~~~DVV 110 (300)
|||+|+|+ |.||..++..+.+ .+.++.. ++++. .....+.-. ...+ ..+ .++. +.+. ++|+|
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~r~~--~~~~~l~~~-~~~~~~~~~~~~~~~~-~~~~------~~d~v 67 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCK-QGHEVQG-WLRVP--QPYCSVNLV-ETDGSIFNESLTANDP-DFLA------TSDLL 67 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSC--CSEEEEEEE-CTTSCEEEEEEEESCH-HHHH------TCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHh-CCCCEEE-EEcCc--cceeeEEEE-cCCCceeeeeeeecCc-cccC------CCCEE
Confidence 58999998 9999999998875 4677654 56542 111111100 0011 111 2444 4443 68999
Q ss_pred EEcCCchhHHHHHHHHHH---cCCCEEEeCCCCCH
Q 022250 111 IDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (300)
Q Consensus 111 IDfT~p~~~~~~~~~al~---~G~~vVigTTG~~~ 142 (300)
|-++.+..+.+.+..... .+..+|.-+.|+..
T Consensus 68 i~~v~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 68 LVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp EECSCGGGHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred EEEecHHhHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 988888777666654443 35566666778743
No 257
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.18 E-value=0.0093 Score=56.02 Aligned_cols=66 Identities=18% Similarity=0.157 Sum_probs=46.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -++++++ +|+... .... ...|+..+.++++++. .+|+|+...
T Consensus 168 g~tvGIIG~-G~IG~~vA~~l~~-~G~~V~~-~d~~~~-~~~~------~~~g~~~~~~l~ell~------~aDvV~l~~ 231 (347)
T 1mx3_A 168 GETLGIIGL-GRVGQAVALRAKA-FGFNVLF-YDPYLS-DGVE------RALGLQRVSTLQDLLF------HSDCVTLHC 231 (347)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCEEEE-ECTTSC-TTHH------HHHTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHH-CCCEEEE-ECCCcc-hhhH------hhcCCeecCCHHHHHh------cCCEEEEcC
Confidence 368999997 9999999998874 5888764 675431 1111 1234445568999985 689999776
Q ss_pred Cc
Q 022250 115 DA 116 (300)
Q Consensus 115 ~p 116 (300)
+.
T Consensus 232 P~ 233 (347)
T 1mx3_A 232 GL 233 (347)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 258
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=96.17 E-value=0.011 Score=52.80 Aligned_cols=34 Identities=26% Similarity=0.270 Sum_probs=28.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~v 67 (300)
|++||.|.|++|.+|+.+++.+.+. ++.++++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 35 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASD 35 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc
Confidence 4578999999999999999999875 467777654
No 259
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.16 E-value=0.018 Score=50.98 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=27.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
||+||.|.|+ |.+|+.+++.+.+. +.++++...
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGG-TCEEEEEES
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEc
Confidence 5789999998 99999999998864 788887654
No 260
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=96.16 E-value=0.029 Score=50.73 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=28.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|||.|.|++|.+|+.+++.+.+.++.++++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 489999999999999999998766888887543
No 261
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.16 E-value=0.012 Score=52.90 Aligned_cols=88 Identities=15% Similarity=0.162 Sum_probs=49.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|++||.|.|++|.+|+.+++.+.+ .+.++++.......+ + +. ..++.-.++++++++. ..+|+||.+
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~---~-~~----~~Dl~d~~~~~~~~~~----~~~d~vih~ 67 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP---K-FE----QVNLLDSNAVHHIIHD----FQPHVIVHC 67 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHT-TTCEEEEEC--------------------------CHHHHHH----HCCSEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHh-CCCeEEEEccCCCCC---C-eE----EecCCCHHHHHHHHHh----hCCCEEEEC
Confidence 457899999999999999999885 578887654221100 0 11 1122222455666641 258999987
Q ss_pred CCc------------------hhHHHHHHHHHHcCCCEE
Q 022250 114 TDA------------------STVYDNVKQATAFGMRSV 134 (300)
Q Consensus 114 T~p------------------~~~~~~~~~al~~G~~vV 134 (300)
... ......++.|.++|+.+|
T Consensus 68 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 106 (315)
T 2ydy_A 68 AAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLI 106 (315)
T ss_dssp C-------------------CHHHHHHHHHHHHHTCEEE
T ss_pred CcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 532 123456677777777766
No 262
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.15 E-value=0.022 Score=52.28 Aligned_cols=106 Identities=14% Similarity=0.143 Sum_probs=62.1
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cC-------cCCCCcceecCHHHHHhccc
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DM-------EQPLEIPVMSDLTMVLGSIS 102 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--g~-------~~~~gv~v~~dl~~~l~~~~ 102 (300)
.-+++||+|+|+ |.||..++..+.+ .+.++....+.. .+..+. |. .....+..+++++++
T Consensus 16 ~~~~~kI~IiGa-Ga~G~~~a~~L~~-~G~~V~l~~~~~----~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~----- 84 (318)
T 3hwr_A 16 YFQGMKVAIMGA-GAVGCYYGGMLAR-AGHEVILIARPQ----HVQAIEATGLRLETQSFDEQVKVSASSDPSAV----- 84 (318)
T ss_dssp ----CEEEEESC-SHHHHHHHHHHHH-TTCEEEEECCHH----HHHHHHHHCEEEECSSCEEEECCEEESCGGGG-----
T ss_pred hccCCcEEEECc-CHHHHHHHHHHHH-CCCeEEEEEcHh----HHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-----
Confidence 445789999998 9999999998875 467776552211 111110 10 001233445676553
Q ss_pred ccCCccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCCCCHHHHHHHHHHh
Q 022250 103 QSKARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFC 152 (300)
Q Consensus 103 ~~~~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG~~~e~~~~L~~~a 152 (300)
.++|+||-++.+..+.+.+.... ..+..+|.-+-|+..++ .|.+..
T Consensus 85 --~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--~l~~~~ 133 (318)
T 3hwr_A 85 --QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD--TLRSLL 133 (318)
T ss_dssp --TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH--HHHHHC
T ss_pred --CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH--HHHHHc
Confidence 47899998887776666665443 33555666677998642 444443
No 263
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=96.15 E-value=0.02 Score=50.66 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=24.2
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhc
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKA 58 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~ 58 (300)
|..+|+||.|.|++|.+|+.+++.+.+.
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~ 29 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADG 29 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTT
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhc
Confidence 4445789999999999999999998864
No 264
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.13 E-value=0.011 Score=50.94 Aligned_cols=122 Identities=18% Similarity=0.218 Sum_probs=66.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee----cCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~DVVI 111 (300)
|||.|+|+ |++|+.+++.+.+ .+.+++ ++|.+. ..+..+. ...++.++ .+.+.+.+. .-.++|++|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~-~g~~v~-vid~~~--~~~~~l~---~~~~~~~i~gd~~~~~~l~~a--~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLS-RKYGVV-IINKDR--ELCEEFA---KKLKATIIHGDGSHKEILRDA--EVSKNDVVV 70 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHH-TTCCEE-EEESCH--HHHHHHH---HHSSSEEEESCTTSHHHHHHH--TCCTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHH---HHcCCeEEEcCCCCHHHHHhc--CcccCCEEE
Confidence 58999998 9999999999875 477766 466542 1122221 11233222 222222110 014789999
Q ss_pred EcCCchhHHHHH-HHHHH-cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 112 DFTDASTVYDNV-KQATA-FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 112 DfT~p~~~~~~~-~~al~-~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
-++..+.....+ ..+.+ ++..-++...- +++..+.+ ++.|+-.+++|....+-.+.
T Consensus 71 ~~~~~d~~n~~~~~~a~~~~~~~~iia~~~-~~~~~~~l----~~~G~d~vi~p~~~~~~~l~ 128 (218)
T 3l4b_C 71 ILTPRDEVNLFIAQLVMKDFGVKRVVSLVN-DPGNMEIF----KKMGITTVLNLTTLITNTVE 128 (218)
T ss_dssp ECCSCHHHHHHHHHHHHHTSCCCEEEECCC-SGGGHHHH----HHHTCEECCCHHHHHHHHHH
T ss_pred EecCCcHHHHHHHHHHHHHcCCCeEEEEEe-CcchHHHH----HHCCCCEEECHHHHHHHHHH
Confidence 777665544433 34444 56665555432 23343444 34456667877766554433
No 265
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.12 E-value=0.014 Score=53.43 Aligned_cols=105 Identities=12% Similarity=0.086 Sum_probs=60.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCc-----CCC---CcceecCHHHHHhcccccC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-----QPL---EIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~-----~~~---gv~v~~dl~~~l~~~~~~~ 105 (300)
|++||+|+|+ |.||..++..+.+ .+.++. +++++.. +.+.+ -|+. ... .+.++++.+++ .
T Consensus 1 M~mkI~IiGa-GaiG~~~a~~L~~-~g~~V~-~~~r~~~-~~i~~-~g~~~~~~~g~~~~~~~~~~~~~~~~-------~ 68 (312)
T 3hn2_A 1 MSLRIAIVGA-GALGLYYGALLQR-SGEDVH-FLLRRDY-EAIAG-NGLKVFSINGDFTLPHVKGYRAPEEI-------G 68 (312)
T ss_dssp ---CEEEECC-STTHHHHHHHHHH-TSCCEE-EECSTTH-HHHHH-TCEEEEETTCCEEESCCCEESCHHHH-------C
T ss_pred CCCEEEEECc-CHHHHHHHHHHHH-CCCeEE-EEEcCcH-HHHHh-CCCEEEcCCCeEEEeeceeecCHHHc-------C
Confidence 5689999998 9999999998875 355654 4554321 11110 0110 001 23456777663 4
Q ss_pred CccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCCCCHHHHHHHHHHh
Q 022250 106 ARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFC 152 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG~~~e~~~~L~~~a 152 (300)
++|+||-++.+....+.+.... ..+..+|+-.-|+..++ .|.+..
T Consensus 69 ~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~--~l~~~~ 116 (312)
T 3hn2_A 69 PMDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEE--ALATLF 116 (312)
T ss_dssp CCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHH--HHHHHT
T ss_pred CCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHH--HHHHHC
Confidence 7899998887777666555443 34555666566997432 344443
No 266
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.10 E-value=0.021 Score=52.00 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=28.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
++||.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLK-LNQVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHH-CCCEEEEEeC
Confidence 57999999999999999999885 5788887654
No 267
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=96.09 E-value=0.01 Score=52.66 Aligned_cols=83 Identities=22% Similarity=0.296 Sum_probs=53.0
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
+..+||.|.|++|.+|+.+++.+.+ .+.++++. ++.. -|+. -.++++++++. ..+|+||.
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~--~Dl~------------d~~~~~~~~~~----~~~d~vih 69 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-KNVEVIPT-DVQD--LDIT------------NVLAVNKFFNE----KKPNVVIN 69 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-SSEEEEEE-CTTT--CCTT------------CHHHHHHHHHH----HCCSEEEE
T ss_pred cccceEEEECCCChHHHHHHHHHHh-CCCeEEec-cCcc--CCCC------------CHHHHHHHHHh----cCCCEEEE
Confidence 4469999999999999999999875 57887764 4321 1111 12245566641 26899998
Q ss_pred cCCch------------------hHHHHHHHHHHcCCCEEE
Q 022250 113 FTDAS------------------TVYDNVKQATAFGMRSVV 135 (300)
Q Consensus 113 fT~p~------------------~~~~~~~~al~~G~~vVi 135 (300)
+.... .....++.|.++|+.+|.
T Consensus 70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~ 110 (292)
T 1vl0_A 70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 110 (292)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEE
T ss_pred CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 76321 124556677777776663
No 268
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.05 E-value=0.012 Score=55.18 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=26.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
..||.|+|+ |..|..+++.+.. .++.=+.++|.
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~-aGVg~ItlvD~ 66 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIA-WGVRKITFVDN 66 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-cCCCEEEEecC
Confidence 368999998 9999999999885 57655667774
No 269
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=96.05 E-value=0.04 Score=49.89 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=28.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|++||.|.|++|.+|+.+++.+.+ .+.++++.+.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~-~G~~V~~~~r 41 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQ-KGYAVNTTVR 41 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEc
Confidence 467999999999999999999885 5889887654
No 270
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=96.04 E-value=0.0057 Score=57.64 Aligned_cols=153 Identities=17% Similarity=0.192 Sum_probs=80.7
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC-------------CCc------chhhhhcCcCCCCccee
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------------VGE------DIGMVCDMEQPLEIPVM 91 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-------------~g~------d~~~~~g~~~~~gv~v~ 91 (300)
|+.|++||+|+|+ ||+||.+.+.+.+. ++++|++=|... .|+ ..+..+-. ....+.++
T Consensus 17 ~~~~~~kVaInGf-GrIGr~vlr~l~e~-~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~~~~~l~i-~Gk~I~v~ 93 (356)
T 3hja_A 17 QGPGSMKLAINGF-GRIGRNVFKIAFER-GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVESRDGAIVV-DGREIKII 93 (356)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEE-TTEEEEEE
T ss_pred cCCCCeEEEEECC-CHHHHHHHHHHHHC-CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEEcCCEEEE-CCEEEEEE
Confidence 3456799999999 99999999998876 899999865310 000 00000000 00123343
Q ss_pred c--CHHHHHhcccccCCccEEEEcCCchhH----HHHHHHHHH-cCCC-EEEeCCC----------CCHHHHHHHHHHhh
Q 022250 92 S--DLTMVLGSISQSKARAVVIDFTDASTV----YDNVKQATA-FGMR-SVVYVPH----------IQLETVSALSAFCD 153 (300)
Q Consensus 92 ~--dl~~~l~~~~~~~~~DVVIDfT~p~~~----~~~~~~al~-~G~~-vVigTTG----------~~~e~~~~L~~~a~ 153 (300)
. |++++-= .+..+|+|++.|-.... .+.+...++ .|.. |||..|. .+++.++ .
T Consensus 94 ~~~dp~~i~w---~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~------~ 164 (356)
T 3hja_A 94 AERDPKNLPW---AKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDIN------S 164 (356)
T ss_dssp CCSSGGGCCH---HHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCC------T
T ss_pred EcCChhhCCc---cccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcC------c
Confidence 2 3332200 01368999987644444 666777777 7754 6665443 3333221 1
Q ss_pred hCCCeEEEcCCCcHHHHHHHHHHHHhccCCCCeE---EEEccC----CC-CCCCc
Q 022250 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVE---IVESRP----NA-RDFPS 200 (300)
Q Consensus 154 ~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~~die---IiE~Hh----~K-~DaPS 200 (300)
+ -.++ +|=|--.|-|.-+++.+-.. |.|+ +.-.|. +| .|.|+
T Consensus 165 ~--~~II--SNaSCTTn~Lap~lkvL~d~-fGI~~g~mTTvhA~T~~Q~~~D~p~ 214 (356)
T 3hja_A 165 D--LKAV--SNASCTTNCLAPLAKVLHES-FGIEQGLMTTVHAYTNDQRILDLPH 214 (356)
T ss_dssp T--CCEE--ECCCHHHHHHHHHHHHHHHH-HCEEEEEEEEEEECCTTSBSSSCCC
T ss_pred C--ccEE--ECCccchhhhhHhHHHHHHh-cCeEEEEEEEEEecccccccccCcc
Confidence 1 2344 66677777666666665432 2333 233363 23 58887
No 271
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.04 E-value=0.021 Score=51.57 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=27.9
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|.++++||.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 46 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLE-KGYRVHGLVA 46 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHH-CCCeEEEEeC
Confidence 346679999999999999999999886 4788887554
No 272
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.03 E-value=0.034 Score=53.31 Aligned_cols=123 Identities=13% Similarity=0.141 Sum_probs=72.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee----cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~DVV 110 (300)
.++|.|+|+ |++|+.+++.+.+ .+.+++. +|.+. ..+..+ ...|++++ ++.+.+... .-.++|+|
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~-~g~~vvv-Id~d~--~~v~~~----~~~g~~vi~GDat~~~~L~~a--gi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLS-SGVKMVV-LDHDP--DHIETL----RKFGMKVFYGDATRMDLLESA--GAAKAEVL 72 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCEEE-EECCH--HHHHHH----HHTTCCCEESCTTCHHHHHHT--TTTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHH----HhCCCeEEEcCCCCHHHHHhc--CCCccCEE
Confidence 368999998 9999999998875 5677664 56542 111211 12344443 233322210 11468988
Q ss_pred EEcCCc-hhHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 111 IDFTDA-STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 111 IDfT~p-~~~~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
|-.+.. +.....+..+.+.+.++-|-.-..++++...|.+ .|+-.++.|++-.+..+.
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L~~----~Gad~Vi~~~~~~a~~la 131 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ----AGVEKPERETFEGALKTG 131 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHHHH----TTCSSCEETTHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHH----CCCCEEECccHHHHHHHH
Confidence 876653 4445666777777755222222334555555643 456668889997777654
No 273
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.02 E-value=0.019 Score=51.57 Aligned_cols=62 Identities=15% Similarity=0.060 Sum_probs=40.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
++||.|.|++|.+|+.+++.+.+ .+.+++++ ++... -| +.-.++++++++. .++|+||.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-~g~~v~~~-~r~~~-~D------------~~d~~~~~~~~~~----~~~d~vih~a 63 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVL-RTRDE-LN------------LLDSRAVHDFFAS----ERIDQVYLAA 63 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-CTTEEEEC-CCTTT-CC------------TTCHHHHHHHHHH----HCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCeEEEE-ecCcc-CC------------ccCHHHHHHHHHh----cCCCEEEEcC
Confidence 47999999999999999999875 57887764 32210 11 1112345556531 2789999876
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
.
T Consensus 64 ~ 64 (321)
T 1e6u_A 64 A 64 (321)
T ss_dssp C
T ss_pred e
Confidence 3
No 274
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.00 E-value=0.013 Score=51.72 Aligned_cols=116 Identities=12% Similarity=0.176 Sum_probs=67.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCcce-------ecCHHHHHhcccccCCcc
Q 022250 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKARA 108 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~~D 108 (300)
||.|.|++|.+|+.+++.+.+. ++.++++...... ....+. ..++.+ .+++++++ .++|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~---~~~~~~----~~~~~~~~~D~~d~~~~~~~~------~~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPA---KAQALA----AQGITVRQADYGDEAALTSAL------QGVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTT---TCHHHH----HTTCEEEECCTTCHHHHHHHT------TTCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChH---hhhhhh----cCCCeEEEcCCCCHHHHHHHH------hCCC
Confidence 5899999999999999998865 4788877543221 111111 011211 12344455 3689
Q ss_pred EEEEcCCc------hhHHHHHHHHHHcCCC-EE-EeCCCC------CHHHHHHHHHHhhhCCCeEE-EcCCC
Q 022250 109 VVIDFTDA------STVYDNVKQATAFGMR-SV-VYVPHI------QLETVSALSAFCDKASMGCL-IAPTL 165 (300)
Q Consensus 109 VVIDfT~p------~~~~~~~~~al~~G~~-vV-igTTG~------~~e~~~~L~~~a~~~~i~iv-~a~N~ 165 (300)
+||.++.+ ......++.|.++|+. +| +++.+. ........+++.++.++++. +-|++
T Consensus 68 ~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~ 139 (286)
T 2zcu_A 68 KLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGW 139 (286)
T ss_dssp EEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHHHCSEEEEEEECC
T ss_pred EEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHHcCCCeEEEeChH
Confidence 99987643 3456667778888864 44 333221 12233455666666666644 45665
No 275
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.98 E-value=0.016 Score=51.63 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=55.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc----hhhhhcCcCCCCccee-------cCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED----IGMVCDMEQPLEIPVM-------SDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d----~~~~~g~~~~~gv~v~-------~dl~~~l~~~~~ 103 (300)
|++|.|.|++|.+|+.+++.+.+. +.++++.........+ ...+..+ ...++.+. +++.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~----- 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNY-QSLGVILLEGDINDHETLVKAI----- 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHH-----
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHH-HhCCCEEEEeCCCCHHHHHHHH-----
Confidence 578999999999999999998864 5777764432201111 0000000 01122221 2344555
Q ss_pred cCCccEEEEcCCc---hhHHHHHHHHHHcC-CCEEEe
Q 022250 104 SKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVY 136 (300)
Q Consensus 104 ~~~~DVVIDfT~p---~~~~~~~~~al~~G-~~vVig 136 (300)
..+|+||.+..+ ......+..|.++| +.-++-
T Consensus 75 -~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 75 -KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp -TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred -hCCCEEEECCcccccccHHHHHHHHHhcCCceEEee
Confidence 368999987643 45567777888888 655553
No 276
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.97 E-value=0.01 Score=52.19 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=26.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (300)
||.+|.|.|++|.+|+.+++.+.+ .+.++++.
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~ 32 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGT-LAHEVRLS 32 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGG-TEEEEEEC
T ss_pred CCceEEEECCCCHHHHHHHHHHHh-CCCEEEEE
Confidence 567899999999999999998875 46777654
No 277
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=95.97 E-value=0.011 Score=55.42 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=46.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|+ |+||+.+++.+...-+++++ ++|+... ..... .+.++...+++++++. .+|+|+...
T Consensus 163 g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~-~~d~~~~--~~~~~----~~~g~~~~~~l~ell~------~aDvVil~v 228 (348)
T 2w2k_A 163 GHVLGAVGL-GAIQKEIARKAVHGLGMKLV-YYDVAPA--DAETE----KALGAERVDSLEELAR------RSDCVSVSV 228 (348)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEE-EECSSCC--CHHHH----HHHTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEEE-CHHHHHHHHHHHHhcCCEEE-EECCCCc--chhhH----hhcCcEEeCCHHHHhc------cCCEEEEeC
Confidence 368999998 99999999988624578876 4776431 11111 1224444568989885 789999877
Q ss_pred Cch
Q 022250 115 DAS 117 (300)
Q Consensus 115 ~p~ 117 (300)
++.
T Consensus 229 p~~ 231 (348)
T 2w2k_A 229 PYM 231 (348)
T ss_dssp CCS
T ss_pred CCC
Confidence 653
No 278
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.96 E-value=0.027 Score=52.68 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=44.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|+ |+||+.+++.+. .-+++++ ++|+... . ..+...+.+++++++ .+|+|+-..
T Consensus 171 gktiGIIGl-G~IG~~vA~~l~-~~G~~V~-~~dr~~~--~---------~~~~~~~~sl~ell~------~aDvVil~v 230 (340)
T 4dgs_A 171 GKRIGVLGL-GQIGRALASRAE-AFGMSVR-YWNRSTL--S---------GVDWIAHQSPVDLAR------DSDVLAVCV 230 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHH-TTTCEEE-EECSSCC--T---------TSCCEECSSHHHHHH------TCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHH-HCCCEEE-EEcCCcc--c---------ccCceecCCHHHHHh------cCCEEEEeC
Confidence 478999998 999999999887 4578876 4675431 1 123344678999985 789998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 231 P 231 (340)
T 4dgs_A 231 A 231 (340)
T ss_dssp -
T ss_pred C
Confidence 4
No 279
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.95 E-value=0.029 Score=54.44 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=26.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
+.||+|+|+ |.||..++..+.+ .+++++ ++|.+
T Consensus 37 ~~kV~VIGa-G~MG~~iA~~la~-~G~~V~-l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGL-GTMGRGIAISFAR-VGISVV-AVESD 69 (463)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHT-TTCEEE-EECSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHh-CCCeEE-EEECC
Confidence 568999998 9999999998874 578866 46753
No 280
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.93 E-value=0.02 Score=51.07 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=26.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
..||.|+|+ |.+|+.+++.+.. .++.=+.++|.+
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~-~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAG-AGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHH-TTCSEEEEECCC
T ss_pred cCcEEEEcc-CHHHHHHHHHHHH-cCCCeEEEEeCC
Confidence 368999998 9999999999875 566556677753
No 281
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.92 E-value=0.013 Score=51.85 Aligned_cols=120 Identities=10% Similarity=0.099 Sum_probs=69.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCcCCCCcce-------ecCHHHHHhcccccCCc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKAR 107 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~~ 107 (300)
++|.|.|++|.+|+.+++.+.+. ++.++++...... ....+. ..++.+ .+++++++ .++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~---~~~~l~----~~~~~~~~~D~~d~~~l~~~~------~~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE---KASTLA----DQGVEVRHGDYNQPESLQKAF------AGV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTT---TTHHHH----HTTCEEEECCTTCHHHHHHHT------TTC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHH---HHhHHh----hcCCeEEEeccCCHHHHHHHH------hcC
Confidence 47999999999999999998865 4788887553221 111111 012211 12344455 368
Q ss_pred cEEEEcCCc--------hhHHHHHHHHHHcCC-CEE-EeCCCC------CHHHHHHHHHHhhhCCCeEE-EcCCCcHH
Q 022250 108 AVVIDFTDA--------STVYDNVKQATAFGM-RSV-VYVPHI------QLETVSALSAFCDKASMGCL-IAPTLSIG 168 (300)
Q Consensus 108 DVVIDfT~p--------~~~~~~~~~al~~G~-~vV-igTTG~------~~e~~~~L~~~a~~~~i~iv-~a~N~SiG 168 (300)
|+||.++.+ ......++.|.++|+ ++| +++.+. ........+++.++.++++. +-|++=.|
T Consensus 68 d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~ 145 (287)
T 2jl1_A 68 SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTD 145 (287)
T ss_dssp SEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHH
T ss_pred CEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHcCCCeEEEECCEecc
Confidence 999987643 234556677888886 454 333221 11233445666666676654 44555444
No 282
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=95.89 E-value=0.025 Score=51.79 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=25.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
++|.|.|++|.+|+.+++.+.+....+++++.
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~ 78 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVD 78 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 78999999999999999998865327777654
No 283
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.87 E-value=0.0068 Score=57.39 Aligned_cols=109 Identities=7% Similarity=0.127 Sum_probs=65.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
.+|+|+|+ |+||+.+++.+.+ .+++++ +.|++. ..+.+++ ..++... -+.++++. .++|++|-+..
T Consensus 174 ktV~V~G~-G~VG~~~A~~L~~-~GakVv-v~D~~~--~~l~~~a---~~~ga~~-v~~~~ll~-----~~~DIvip~a~ 239 (364)
T 1leh_A 174 LAVSVQGL-GNVAKALCKKLNT-EGAKLV-VTDVNK--AAVSAAV---AEEGADA-VAPNAIYG-----VTCDIFAPCAL 239 (364)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH---HHHCCEE-CCGGGTTT-----CCCSEEEECSC
T ss_pred CEEEEECc-hHHHHHHHHHHHH-CCCEEE-EEcCCH--HHHHHHH---HHcCCEE-EChHHHhc-----cCCcEeeccch
Confidence 68999998 9999999998875 588988 888643 1222222 1123222 24456664 58899987665
Q ss_pred chhH-HHHHHHHHHcCCCEEEeCCC-C-CHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 116 ASTV-YDNVKQATAFGMRSVVYVPH-I-QLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 116 p~~~-~~~~~~al~~G~~vVigTTG-~-~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
.... .+++. ..+..+|++++. . +.++ ..++.++.|+ ++.|-+.
T Consensus 240 ~~~I~~~~~~---~lg~~iV~e~An~p~t~~e---a~~~L~~~Gi--~~~Pd~~ 285 (364)
T 1leh_A 240 GAVLNDFTIP---QLKAKVIAGSADNQLKDPR---HGKYLHELGI--VYAPDYV 285 (364)
T ss_dssp SCCBSTTHHH---HCCCSEECCSCSCCBSSHH---HHHHHHHHTC--EECCHHH
T ss_pred HHHhCHHHHH---hCCCcEEEeCCCCCcccHH---HHHHHHhCCC--EEeccee
Confidence 4433 23333 348889998873 2 2223 3334455444 6666544
No 284
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.86 E-value=0.025 Score=51.49 Aligned_cols=87 Identities=22% Similarity=0.227 Sum_probs=52.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
+++|.|.|++|.+|+.+++.+.+ .+.++++...... ...+..+ ...+.-.+++++++ .++|+||.+.
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~~-~~~~~~~-----~~Dl~d~~~~~~~~------~~~d~vih~A 85 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRPS-GTGGEEV-----VGSLEDGQALSDAI------MGVSAVLHLG 85 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSCC-SSCCSEE-----ESCTTCHHHHHHHH------TTCSEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCC-CCCccEE-----ecCcCCHHHHHHHH------hCCCEEEECC
Confidence 58999999999999999999886 4788887543221 1111000 01111123445566 3799999875
Q ss_pred Cc----------------hhHHHHHHHHHHcCC-CEE
Q 022250 115 DA----------------STVYDNVKQATAFGM-RSV 134 (300)
Q Consensus 115 ~p----------------~~~~~~~~~al~~G~-~vV 134 (300)
.+ ..+...++.|.++++ .+|
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V 122 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFV 122 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 32 123456777788886 444
No 285
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.86 E-value=0.022 Score=52.58 Aligned_cols=42 Identities=21% Similarity=0.241 Sum_probs=27.8
Q ss_pred EeecCCCCC---cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEE
Q 022250 26 SCSTNPPQS---NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAI 67 (300)
Q Consensus 26 ~~~~~~~~~---~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~v 67 (300)
.++++|... .++|.|.|++|.+|+.+++.+.+.++. ++++..
T Consensus 9 ~~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 9 SMSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp -------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CCCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 345666532 378999999999999999999876465 777643
No 286
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.85 E-value=0.0045 Score=56.21 Aligned_cols=98 Identities=10% Similarity=-0.005 Sum_probs=52.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|+|||+|+|+ |.||..++..+.+. +.++. +++++..+.+.....| .....+..+..+.+. .++|+||-+
T Consensus 1 M~mkI~iiGa-Ga~G~~~a~~L~~~-g~~V~-~~~r~~~~~~~~~~~g---~~~~~~~~~~~~~~~-----~~~D~vila 69 (294)
T 3g17_A 1 MSLSVAIIGP-GAVGTTIAYELQQS-LPHTT-LIGRHAKTITYYTVPH---APAQDIVVKGYEDVT-----NTFDVIIIA 69 (294)
T ss_dssp --CCEEEECC-SHHHHHHHHHHHHH-CTTCE-EEESSCEEEEEESSTT---SCCEEEEEEEGGGCC-----SCEEEEEEC
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHC-CCeEE-EEEeccCcEEEEecCC---eeccceecCchHhcC-----CCCCEEEEe
Confidence 5689999998 99999999988753 34443 3444321111110001 111223333333331 478999988
Q ss_pred CCchhHHHHHHHHHH---cCCCEEEeCCCCCH
Q 022250 114 TDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (300)
Q Consensus 114 T~p~~~~~~~~~al~---~G~~vVigTTG~~~ 142 (300)
+.+..+.+.+..... .+..+|+-.-|+..
T Consensus 70 vk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 70 VKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp SCGGGHHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred CCccCHHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 888777666554432 23344444446543
No 287
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.84 E-value=0.015 Score=51.69 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=26.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|+||.|.|+ |.+|+.+++.+.+ .+.+++++..
T Consensus 3 ~~~ilVtGa-G~iG~~l~~~L~~-~g~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAGC-GDLGLELARRLTA-QGHEVTGLRR 34 (286)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHH-CCCEEEEEeC
Confidence 579999995 9999999999886 4788887654
No 288
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.83 E-value=0.027 Score=51.01 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=27.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
++++|.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 36 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLA-HGYDVVIAD 36 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHH-CCCcEEEEe
Confidence 457999999999999999999885 478877653
No 289
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.82 E-value=0.028 Score=51.18 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
.+++|.|.|++|.+|+.+++.+.+ .+.+++++.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 58 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 58 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHH-CCCEEEEEe
Confidence 357999999999999999999886 478888754
No 290
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.81 E-value=0.047 Score=50.66 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=28.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+|++|.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 61 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-EGHYVIASDW 61 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-CCCeEEEEEC
Confidence 467999999999999999999886 4788887543
No 291
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=95.80 E-value=0.0088 Score=55.04 Aligned_cols=102 Identities=14% Similarity=0.001 Sum_probs=59.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|. |+||+.+++.+.. -++++++ +|+... .. +...+.++++++. .+|+|+-..
T Consensus 124 g~~vgIIG~-G~IG~~~A~~l~~-~G~~V~~-~dr~~~-~~-----------~~~~~~~l~ell~------~aDvV~l~~ 182 (303)
T 1qp8_A 124 GEKVAVLGL-GEIGTRVGKILAA-LGAQVRG-FSRTPK-EG-----------PWRFTNSLEEALR------EARAAVCAL 182 (303)
T ss_dssp TCEEEEESC-STHHHHHHHHHHH-TTCEEEE-ECSSCC-CS-----------SSCCBSCSHHHHT------TCSEEEECC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHH-CCCEEEE-ECCCcc-cc-----------CcccCCCHHHHHh------hCCEEEEeC
Confidence 478999997 9999999998874 5788764 675431 10 1223468889884 789999766
Q ss_pred Cchh-HHH----HHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCe
Q 022250 115 DAST-VYD----NVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMG 158 (300)
Q Consensus 115 ~p~~-~~~----~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~ 158 (300)
+... +.. .....++.|.-+|--.+|-- .+.+.|.++.++..+.
T Consensus 183 P~~~~t~~~i~~~~l~~mk~gailin~srg~~-vd~~aL~~aL~~g~i~ 230 (303)
T 1qp8_A 183 PLNKHTRGLVKYQHLALMAEDAVFVNVGRAEV-LDRDGVLRILKERPQF 230 (303)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTCEEEECSCGGG-BCHHHHHHHHHHCTTC
T ss_pred cCchHHHHHhCHHHHhhCCCCCEEEECCCCcc-cCHHHHHHHHHhCCce
Confidence 4332 221 12223344444443333421 1123566666665554
No 292
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.78 E-value=0.074 Score=49.24 Aligned_cols=114 Identities=11% Similarity=0.131 Sum_probs=63.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-e-------cCHHHHHhcccccCC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M-------SDLTMVLGSISQSKA 106 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~-------~dl~~~l~~~~~~~~ 106 (300)
+++|.|.|+||.+|+.+++.+.+ .+.++++...... ......+.. ..++.+ . +++++++ ..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~-~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~~~------~~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAA-VGHHVRAQVHSLK-GLIAEELQA---IPNVTLFQGPLLNNVPLMDTLF------EG 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHH-TTCCEEEEESCSC-SHHHHHHHT---STTEEEEESCCTTCHHHHHHHH------TT
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCCC-hhhHHHHhh---cCCcEEEECCccCCHHHHHHHH------hc
Confidence 47899999999999999999886 5788877553221 111111210 012211 1 1244555 36
Q ss_pred ccEEEEcCCc------hhHHHHHHHHHHcC-C-CEE-EeCCC--C--------CHHHHHHHHHHhhhCCCeE
Q 022250 107 RAVVIDFTDA------STVYDNVKQATAFG-M-RSV-VYVPH--I--------QLETVSALSAFCDKASMGC 159 (300)
Q Consensus 107 ~DVVIDfT~p------~~~~~~~~~al~~G-~-~vV-igTTG--~--------~~e~~~~L~~~a~~~~i~i 159 (300)
+|+||..+.. ......+..|.+.| + .+| +++.+ . ........+++.++.++++
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~ 145 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPS 145 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCE
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCE
Confidence 8999876532 12345566777788 5 455 33322 0 0122345566666656544
No 293
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=95.77 E-value=0.024 Score=52.58 Aligned_cols=66 Identities=11% Similarity=0.065 Sum_probs=45.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.++|+|+|+ |+||+.+++.+.. .+++++ ++|+.. ...... ...++... ++++++. .+|+|+...
T Consensus 155 g~~vgIIG~-G~iG~~iA~~l~~-~G~~V~-~~d~~~--~~~~~~----~~~g~~~~-~l~e~l~------~aDvVi~~v 218 (330)
T 2gcg_A 155 QSTVGIIGL-GRIGQAIARRLKP-FGVQRF-LYTGRQ--PRPEEA----AEFQAEFV-STPELAA------QSDFIVVAC 218 (330)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGG-GTCCEE-EEESSS--CCHHHH----HTTTCEEC-CHHHHHH------HCSEEEECC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEE-EECCCC--cchhHH----HhcCceeC-CHHHHHh------hCCEEEEeC
Confidence 368999998 9999999998874 578865 466542 111111 13344444 8888884 789999877
Q ss_pred Cc
Q 022250 115 DA 116 (300)
Q Consensus 115 ~p 116 (300)
++
T Consensus 219 p~ 220 (330)
T 2gcg_A 219 SL 220 (330)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 294
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=95.74 E-value=0.013 Score=55.10 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=46.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -+++++ ++|+.. .+.... ...|+...+++++++. .+|+|+-..
T Consensus 164 gktvGIIG~-G~IG~~vA~~l~~-~G~~V~-~~dr~~--~~~~~~----~~~g~~~~~~l~ell~------~aDvV~l~~ 228 (351)
T 3jtm_A 164 GKTIGTVGA-GRIGKLLLQRLKP-FGCNLL-YHDRLQ--MAPELE----KETGAKFVEDLNEMLP------KCDVIVINM 228 (351)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGG-GCCEEE-EECSSC--CCHHHH----HHHCCEECSCHHHHGG------GCSEEEECS
T ss_pred CCEEeEEEe-CHHHHHHHHHHHH-CCCEEE-EeCCCc--cCHHHH----HhCCCeEcCCHHHHHh------cCCEEEECC
Confidence 478999998 9999999998874 588865 467543 111111 1234555679999985 789998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 229 P 229 (351)
T 3jtm_A 229 P 229 (351)
T ss_dssp C
T ss_pred C
Confidence 4
No 295
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.73 E-value=0.039 Score=50.08 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=30.0
Q ss_pred cCCCCC-cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 29 TNPPQS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 29 ~~~~~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
.+|..+ .++|.|.|++|.+|+.+++.+.+ .+.++++...
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~-~g~~V~~~~r 52 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDN 52 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGG-GTCEEEEEEC
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 445443 47999999999999999999886 4788887543
No 296
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.71 E-value=0.015 Score=51.71 Aligned_cols=82 Identities=13% Similarity=0.136 Sum_probs=51.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||.|.|++|.+|+.+++.+. .+.++++. ++... .. ...+.-.++++++++ ..++|+||.+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~--~g~~V~~~-~r~~~------~~----~~D~~d~~~~~~~~~----~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA--PVGNLIAL-DVHSK------EF----CGDFSNPKGVAETVR----KLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT--TTSEEEEE-CTTCS------SS----CCCTTCHHHHHHHHH----HHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh--cCCeEEEe-ccccc------cc----cccCCCHHHHHHHHH----hcCCCEEEECcc
Confidence 489999999999999999887 48888874 43220 00 111111234556664 124899999753
Q ss_pred ch------------------hHHHHHHHHHHcCCCEE
Q 022250 116 AS------------------TVYDNVKQATAFGMRSV 134 (300)
Q Consensus 116 p~------------------~~~~~~~~al~~G~~vV 134 (300)
+. .....++.|.+.|+.+|
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 100 (299)
T 1n2s_A 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVV 100 (299)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEE
T ss_pred cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 21 13455566767777666
No 297
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.65 E-value=0.045 Score=52.67 Aligned_cols=137 Identities=14% Similarity=0.175 Sum_probs=82.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCcCCCC-c-----ceecCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I-----PVMSDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~~~~~g~~~~~g-v-----~v~~dl~~~l~~~~~ 103 (300)
..+|+|.|+ |+||+..++.+.+..+.++|++.|+. +.|-|...+.......+ + ..+-+.++++.
T Consensus 209 g~~vaVqG~-GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~---- 283 (415)
T 2tmg_A 209 KATVAVQGF-GNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE---- 283 (415)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT----
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc----
Confidence 378999997 99999999988753699999999962 33445433221100001 0 01224567775
Q ss_pred cCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCc---HHHHHH-HHHH
Q 022250 104 SKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLS---IGSILL-QQAA 176 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~S---iGv~ll-~~~a 176 (300)
.++|++|.++..... .+++. +.+..+|++-- .++++..+.| +++|+ ++.|-+. =||..- .+..
T Consensus 284 -~~~DIliP~A~~n~i~~~~a~---~l~ak~V~EgAN~p~t~~a~~~l----~~~Gi--~~~PD~~aNaGGV~~s~~E~v 353 (415)
T 2tmg_A 284 -LDVDILVPAALEGAIHAGNAE---RIKAKAVVEGANGPTTPEADEIL----SRRGI--LVVPDILANAGGVTVSYFEWV 353 (415)
T ss_dssp -CSCSEEEECSSTTSBCHHHHT---TCCCSEEECCSSSCBCHHHHHHH----HHTTC--EEECHHHHTCHHHHHHHHHHH
T ss_pred -CCCcEEEecCCcCccCcccHH---HcCCeEEEeCCCcccCHHHHHHH----HHCCC--EEEChHHHhCCCceEEEEEEE
Confidence 689999999876554 33443 55888998865 4565433222 34455 5555443 255432 3455
Q ss_pred HHhccCCCCe
Q 022250 177 ISASFHYKNV 186 (300)
Q Consensus 177 ~~~~~~~~di 186 (300)
+....++|+-
T Consensus 354 qN~~~~~w~~ 363 (415)
T 2tmg_A 354 QDLQSFFWDL 363 (415)
T ss_dssp HHHTTCCCCH
T ss_pred ecCccccCCH
Confidence 5555556653
No 298
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=95.62 E-value=0.038 Score=50.14 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=27.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|+++|.|.|++|.+|+.+++.+.+ .+.+++++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLE-AGYLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 567999999999999999999886 478887754
No 299
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.61 E-value=0.016 Score=52.95 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=54.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecC----------HHHHHhcccc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD----------LTMVLGSISQ 103 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~d----------l~~~l~~~~~ 103 (300)
|+|||+|+|+ |.||..++..+. .+.++.. ++++. .....+. +.|+.+..+ -++..
T Consensus 1 M~mkI~IiGa-Ga~G~~~a~~L~--~g~~V~~-~~r~~--~~~~~l~----~~G~~~~~~~~~~~~~~~~~~~~~----- 65 (307)
T 3ego_A 1 MSLKIGIIGG-GSVGLLCAYYLS--LYHDVTV-VTRRQ--EQAAAIQ----SEGIRLYKGGEEFRADCSADTSIN----- 65 (307)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHH--TTSEEEE-ECSCH--HHHHHHH----HHCEEEEETTEEEEECCEEESSCC-----
T ss_pred CCCEEEEECC-CHHHHHHHHHHh--cCCceEE-EECCH--HHHHHHH----hCCceEecCCCeeccccccccccc-----
Confidence 5789999998 999999999887 5677664 44431 1111111 112211100 01222
Q ss_pred cCCccEEEEcCCchhHHHHHHHHHHcCCC-EEEeCCCCCHH
Q 022250 104 SKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPHIQLE 143 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~~~~~~~al~~G~~-vVigTTG~~~e 143 (300)
.++|+||-++.+....+.+......+.. +|+-.-|+..+
T Consensus 66 -~~~D~vilavK~~~~~~~l~~l~~~~~~~ivs~~nGi~~~ 105 (307)
T 3ego_A 66 -SDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGMGHI 105 (307)
T ss_dssp -SCCSEEEECCCGGGHHHHHHHTTSSCCCEEEECCSSSHHH
T ss_pred -CCCCEEEEEeCHHHHHHHHHHhhcCCCCeEEEecCCccHH
Confidence 4789999888887777766554433222 55545588653
No 300
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=95.60 E-value=0.0093 Score=55.07 Aligned_cols=64 Identities=20% Similarity=0.193 Sum_probs=44.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -+++++ ++|+... .. .. ...|+.. .++++++. .+|+|+...
T Consensus 142 g~~vgIIG~-G~IG~~~A~~l~~-~G~~V~-~~d~~~~--~~-~~----~~~g~~~-~~l~ell~------~aDvVvl~~ 204 (313)
T 2ekl_A 142 GKTIGIVGF-GRIGTKVGIIANA-MGMKVL-AYDILDI--RE-KA----EKINAKA-VSLEELLK------NSDVISLHV 204 (313)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHH-TTCEEE-EECSSCC--HH-HH----HHTTCEE-CCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEee-CHHHHHHHHHHHH-CCCEEE-EECCCcc--hh-HH----HhcCcee-cCHHHHHh------hCCEEEEec
Confidence 478999998 9999999998874 578876 4676431 11 11 1234443 48889885 689999776
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 205 P 205 (313)
T 2ekl_A 205 T 205 (313)
T ss_dssp C
T ss_pred c
Confidence 5
No 301
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.56 E-value=0.044 Score=49.81 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=28.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|++|.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLE-RGDKVVGIDN 53 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEEC
Confidence 57999999999999999999886 4788887643
No 302
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.49 E-value=0.028 Score=51.51 Aligned_cols=70 Identities=21% Similarity=0.300 Sum_probs=43.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-CcCC--CCcceecCHHHHHhcccccCCccEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQP--LEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g-~~~~--~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
.||+|+|+ |.||..++..+. .+++++ ++|++. ..+..... +... .++...+|+++ + .++|+||.
T Consensus 13 ~~V~vIG~-G~MG~~iA~~la--aG~~V~-v~d~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~-~------~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGA-GLMGRGIAIAIA--SKHEVV-LQDVSE--KALEAAREQIPEELLSKIEFTTTLEK-V------KDCDIVME 79 (293)
T ss_dssp CEEEEECC-SHHHHHHHHHHH--TTSEEE-EECSCH--HHHHHHHHHSCGGGGGGEEEESSCTT-G------GGCSEEEE
T ss_pred CeEEEEee-CHHHHHHHHHHH--cCCEEE-EEECCH--HHHHHHHHHHHHHHhCCeEEeCCHHH-H------cCCCEEEE
Confidence 78999998 999999999888 688866 467542 11111110 0000 14555677765 4 37899998
Q ss_pred cCCchh
Q 022250 113 FTDAST 118 (300)
Q Consensus 113 fT~p~~ 118 (300)
+.+.+.
T Consensus 80 avpe~~ 85 (293)
T 1zej_A 80 AVFEDL 85 (293)
T ss_dssp CCCSCH
T ss_pred cCcCCH
Confidence 765433
No 303
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=95.46 E-value=0.013 Score=55.41 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=46.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcE-EEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGME-VAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~e-Lvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
..+|+|+|+ |+||+.+++.+.. -+++ +++ +|+.....+ .. ...|+...+++++++. .+|+|+..
T Consensus 164 g~tvgIIG~-G~IG~~vA~~l~~-~G~~~V~~-~d~~~~~~~---~~---~~~g~~~~~~l~ell~------~aDvV~l~ 228 (364)
T 2j6i_A 164 GKTIATIGA-GRIGYRVLERLVP-FNPKELLY-YDYQALPKD---AE---EKVGARRVENIEELVA------QADIVTVN 228 (364)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGG-GCCSEEEE-ECSSCCCHH---HH---HHTTEEECSSHHHHHH------TCSEEEEC
T ss_pred CCEEEEECc-CHHHHHHHHHHHh-CCCcEEEE-ECCCccchh---HH---HhcCcEecCCHHHHHh------cCCEEEEC
Confidence 468999998 9999999998874 4775 654 675431111 11 1345555568999985 78999987
Q ss_pred CCch
Q 022250 114 TDAS 117 (300)
Q Consensus 114 T~p~ 117 (300)
.+..
T Consensus 229 ~P~t 232 (364)
T 2j6i_A 229 APLH 232 (364)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 7543
No 304
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.44 E-value=0.017 Score=56.53 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=26.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
+.||+|+|+ |.||..++..+.+ .+++++ ++|.+
T Consensus 5 ~~kVgVIGa-G~MG~~IA~~la~-aG~~V~-l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGS-GTMGAGIAEVAAS-HGHQVL-LYDIS 37 (483)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCeEE-EEECC
Confidence 358999998 9999999998875 577765 46754
No 305
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=95.38 E-value=0.026 Score=52.45 Aligned_cols=105 Identities=13% Similarity=0.076 Sum_probs=60.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.++|+|+|+ |+||+.+++.+.. -+++++ ++|+... . +.. ...|+. +.++++++. .+|+|+...
T Consensus 150 g~~vgIIG~-G~iG~~iA~~l~~-~G~~V~-~~d~~~~--~--~~~---~~~g~~-~~~l~~~l~------~aDvVil~v 212 (334)
T 2dbq_A 150 GKTIGIIGL-GRIGQAIAKRAKG-FNMRIL-YYSRTRK--E--EVE---RELNAE-FKPLEDLLR------ESDFVVLAV 212 (334)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSCC--H--HHH---HHHCCE-ECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHh-CCCEEE-EECCCcc--h--hhH---hhcCcc-cCCHHHHHh------hCCEEEECC
Confidence 478999997 9999999998875 578876 4676431 1 111 122333 358888885 789999877
Q ss_pred Cchh-HH----HHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCC
Q 022250 115 DAST-VY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (300)
Q Consensus 115 ~p~~-~~----~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i 157 (300)
++.. +. +.....++.|.-+|...+|..-+ .+.|.++.++.++
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~-~~aL~~aL~~~~i 259 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKTAILINIARGKVVD-TNALVKALKEGWI 259 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBC-HHHHHHHHHHTSS
T ss_pred CCChHHHHhhCHHHHhcCCCCcEEEECCCCcccC-HHHHHHHHHhCCe
Confidence 5443 21 12223344454444434442211 1345555554444
No 306
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.37 E-value=0.028 Score=56.62 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=27.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
..||.|+|+ |..|..+++.+.. .++.=+.++|.+
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~-aGVG~ItLvD~D 359 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIA-WGVRKITFVDNG 359 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCC
Confidence 368999999 9999999999885 576556678853
No 307
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.37 E-value=0.029 Score=54.66 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=27.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
.+.||+|+|+ |.||..++..+.+ .+++++. +|.+
T Consensus 53 ~i~kVaVIGa-G~MG~~IA~~la~-aG~~V~l-~D~~ 86 (460)
T 3k6j_A 53 DVNSVAIIGG-GTMGKAMAICFGL-AGIETFL-VVRN 86 (460)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSC
T ss_pred cCCEEEEECC-CHHHHHHHHHHHH-CCCeEEE-EECc
Confidence 3579999998 9999999998875 5888764 6654
No 308
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.36 E-value=0.029 Score=51.74 Aligned_cols=74 Identities=12% Similarity=0.183 Sum_probs=50.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
|||.|.|++|.+|+.+++.+.+....+++. +|.. .| .++++++++ ++|+||.+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~-~d~~---~d---------------~~~l~~~~~------~~d~Vih~a~ 55 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE-VHRQ---TK---------------EEELESALL------KADFIVHLAG 55 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEE-CCTT---CC---------------HHHHHHHHH------HCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEE-ECCC---CC---------------HHHHHHHhc------cCCEEEECCc
Confidence 589999999999999999998764447664 3331 01 123456664 6899998652
Q ss_pred --------------chhHHHHHHHHHHcCCC--EE
Q 022250 116 --------------ASTVYDNVKQATAFGMR--SV 134 (300)
Q Consensus 116 --------------p~~~~~~~~~al~~G~~--vV 134 (300)
.......++.|.++|+. +|
T Consensus 56 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v 90 (369)
T 3st7_A 56 VNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAIL 90 (369)
T ss_dssp SBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 22345677778888854 55
No 309
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=95.33 E-value=0.025 Score=52.35 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=45.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
..+|+|+|+ |+||+.+++.+.. -+++++ ++|+ ... . ... ...|+...+++++++. .+|+|+..
T Consensus 146 g~~vgIIG~-G~IG~~~A~~l~~-~G~~V~-~~d~~~~~--~-~~~----~~~g~~~~~~l~ell~------~aDvVil~ 209 (320)
T 1gdh_A 146 NKTLGIYGF-GSIGQALAKRAQG-FDMDID-YFDTHRAS--S-SDE----ASYQATFHDSLDSLLS------VSQFFSLN 209 (320)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCEEE-EECSSCCC--H-HHH----HHHTCEECSSHHHHHH------HCSEEEEC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEE-EECCCCcC--h-hhh----hhcCcEEcCCHHHHHh------hCCEEEEe
Confidence 368999998 9999999998874 578876 4676 431 1 111 1234444558999885 78999977
Q ss_pred CC
Q 022250 114 TD 115 (300)
Q Consensus 114 T~ 115 (300)
.+
T Consensus 210 ~p 211 (320)
T 1gdh_A 210 AP 211 (320)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 310
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.32 E-value=0.047 Score=50.48 Aligned_cols=74 Identities=16% Similarity=0.108 Sum_probs=42.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCcCCCCcce---ecCHHHHHhcccccCCccE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPV---MSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v---~~dl~~~l~~~~~~~~~DV 109 (300)
+++||+|+|++|.+|..++..+.+..- .+|+. +|.+..-..+.++.....+..+.. ++|+++++ .++|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l-~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al------~gaDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHL-YDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAAL------TGMDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEE-EESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHH------TTCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHc------CCCCE
Confidence 358999999779999999998875432 46655 775431001112221101112222 23677777 47899
Q ss_pred EEEcC
Q 022250 110 VIDFT 114 (300)
Q Consensus 110 VIDfT 114 (300)
||...
T Consensus 80 Vi~~a 84 (326)
T 1smk_A 80 IIVPA 84 (326)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 98654
No 311
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=95.32 E-value=0.073 Score=47.37 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=28.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
||+||.|.|++|.+|+.+++.+.+. +.++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS-GEEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-TCCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC-CCEEEEEec
Confidence 4689999999999999999998864 778776543
No 312
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.32 E-value=0.013 Score=54.21 Aligned_cols=89 Identities=9% Similarity=-0.014 Sum_probs=58.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCC--CCcceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP--LEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~--~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
..+|+|+|+ |.||+.+++.+.+..+.+.+.++|++. ..+..++..-.. .++. ++|+++++ ++|+||-
T Consensus 125 ~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~--~~a~~la~~~~~~~~~~~-~~~~~e~v-------~aDvVi~ 193 (322)
T 1omo_A 125 SSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVRE--KAAKKFVSYCEDRGISAS-VQPAEEAS-------RCDVLVT 193 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHHHTTCCEE-ECCHHHHT-------SSSEEEE
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCH--HHHHHHHHHHHhcCceEE-ECCHHHHh-------CCCEEEE
Confidence 368999998 999999999988766778888898753 222223210000 2344 77888775 4799998
Q ss_pred cCCchhHHHHH-HHHHHcCCCEEEe
Q 022250 113 FTDASTVYDNV-KQATAFGMRSVVY 136 (300)
Q Consensus 113 fT~p~~~~~~~-~~al~~G~~vVig 136 (300)
+|+... ..+ ..+++.|++|+..
T Consensus 194 aTp~~~--pv~~~~~l~~G~~V~~i 216 (322)
T 1omo_A 194 TTPSRK--PVVKAEWVEEGTHINAI 216 (322)
T ss_dssp CCCCSS--CCBCGGGCCTTCEEEEC
T ss_pred eeCCCC--ceecHHHcCCCeEEEEC
Confidence 775322 222 2467789988854
No 313
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.30 E-value=0.018 Score=51.57 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=44.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
||+|+|+ |+||+.++..+.+ .+.+=+-+++++. ..+.+++ ..++...++++++++. ++|+||..|+
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~-~G~~~I~v~nR~~--~ka~~la---~~~~~~~~~~~~~~~~------~aDiVInatp 175 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQ-MGVKDIWVVNRTI--ERAKALD---FPVKIFSLDQLDEVVK------KAKSLFNTTS 175 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHH-TTCCCEEEEESCH--HHHHTCC---SSCEEEEGGGHHHHHH------TCSEEEECSS
T ss_pred eEEEECc-HHHHHHHHHHHHH-cCCCEEEEEeCCH--HHHHHHH---HHcccCCHHHHHhhhc------CCCEEEECCC
Confidence 8999998 9999999998875 4553344667643 2333333 2334334567777774 7899998775
No 314
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=95.30 E-value=0.12 Score=45.67 Aligned_cols=83 Identities=14% Similarity=0.184 Sum_probs=52.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc---EEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VVI 111 (300)
+..|.|.|++|.+|+.+++.+.+ .+.+++...+++. .....+ .+.+.+ ...+ +..
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~-~G~~V~~~~~~~~--~~~~~~---------------~~~~~~----~~~~~~~~~~ 83 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAAR-QGWRVGVNYAANR--EAADAV---------------VAAITE----SGGEAVAIPG 83 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHH----TTCEEEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCCh--hHHHHH---------------HHHHHh----cCCcEEEEEc
Confidence 34689999999999999999885 5788765544431 111111 111110 1222 345
Q ss_pred EcCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 112 DFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
|.+.++...+.+..+.+. ++.+||-..|
T Consensus 84 Dl~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 788888888777776665 7889887665
No 315
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.23 E-value=0.063 Score=48.26 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=26.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|+||.|.|++|.+|+.+++.+.+ .+.+++++.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVD-EGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEe
Confidence 57899999999999999999886 478888754
No 316
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.21 E-value=0.072 Score=48.59 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=27.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|++|.|.|++|.+|+.+++.+.+. +.+++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 579999999999999999998864 788887543
No 317
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.18 E-value=0.16 Score=43.43 Aligned_cols=31 Identities=29% Similarity=0.334 Sum_probs=26.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGM--EVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~v 67 (300)
++|.|.|++|.+|+.+++.+.+. +. ++++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ-GLFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEE
Confidence 68999999999999999998864 55 777654
No 318
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=95.18 E-value=0.065 Score=47.57 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=51.4
Q ss_pred eEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCcCCCCccee--cCHHHHHhcccccC----CccE
Q 022250 37 KVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSK----ARAV 109 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~--~dl~~~l~~~~~~~----~~DV 109 (300)
||.|.|++|.+|+.+++.+.+. + .+++++ ++.........+.+. .....+. ++++++++ . ++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~-----~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK-GITDILVV-DNLKDGTKFVNLVDL--NIADYMDKEDFLIQIMA-----GEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCCEEEE-ECCSSGGGGHHHHTS--CCSEEEEHHHHHHHHHT-----TCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHC-CCcEEEEE-ccCCCCchhhhcCcc--eeccccccHHHHHHHHh-----ccccCCCcE
Confidence 5899999999999999998864 5 777765 433211111112111 0101111 23444553 2 5899
Q ss_pred EEEcCCch----------------hHHHHHHHHHHcCCCEE
Q 022250 110 VIDFTDAS----------------TVYDNVKQATAFGMRSV 134 (300)
Q Consensus 110 VIDfT~p~----------------~~~~~~~~al~~G~~vV 134 (300)
||.+..+. .....++.|.++|+.+|
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 112 (310)
T 1eq2_A 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFL 112 (310)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEE
T ss_pred EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 99875321 13456667777787666
No 319
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.18 E-value=0.049 Score=49.18 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=27.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|+||.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALS-QGIDLIVFD 32 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHh-CCCEEEEEe
Confidence 46899999999999999999886 578888754
No 320
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=95.18 E-value=0.11 Score=45.10 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=25.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|||.|.|++|.+|+.+++.+.+ +.++++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~--g~~V~~~~ 30 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE--RHEVIKVY 30 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT--TSCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc--CCeEEEec
Confidence 4799999999999999999883 68877644
No 321
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=95.15 E-value=0.017 Score=55.10 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=45.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|+ |+||+.+++.+.. -+++++ ++|+.....+.. ...|+..+.++++++. .+|+|+...
T Consensus 191 gktvGIIGl-G~IG~~vA~~l~a-~G~~V~-~~d~~~~~~~~~------~~~G~~~~~~l~ell~------~aDvV~l~~ 255 (393)
T 2nac_A 191 AMHVGTVAA-GRIGLAVLRRLAP-FDVHLH-YTDRHRLPESVE------KELNLTWHATREDMYP------VCDVVTLNC 255 (393)
T ss_dssp TCEEEEECC-SHHHHHHHHHHGG-GTCEEE-EECSSCCCHHHH------HHHTCEECSSHHHHGG------GCSEEEECS
T ss_pred CCEEEEEeE-CHHHHHHHHHHHh-CCCEEE-EEcCCccchhhH------hhcCceecCCHHHHHh------cCCEEEEec
Confidence 368999998 9999999998874 578876 466542111111 1234444568999884 789999776
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 256 P 256 (393)
T 2nac_A 256 P 256 (393)
T ss_dssp C
T ss_pred C
Confidence 5
No 322
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.14 E-value=0.14 Score=47.22 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=43.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhhc-CcCCCCcceecCHHHHHhcccccCCc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~~~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (300)
++||+|+|+ |.||..++..+... ++ + +..+|.+.. | .+...... ......+..++|+ +.+ .++
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~-g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al------~~a 73 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQK-NLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDL------AGA 73 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGG------TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHh------CCC
Confidence 579999998 99999999988764 54 7 777886431 0 11111100 0012234445787 555 478
Q ss_pred cEEEEcC
Q 022250 108 AVVIDFT 114 (300)
Q Consensus 108 DVVIDfT 114 (300)
|+||...
T Consensus 74 D~Vi~a~ 80 (322)
T 1t2d_A 74 DVVIVTA 80 (322)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9998654
No 323
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=95.12 E-value=0.064 Score=48.01 Aligned_cols=70 Identities=16% Similarity=0.217 Sum_probs=39.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc-hhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED-IGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d-~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
|++|.|.|++|.+|+.+++.+.+. + .++.+........+ ....+.. -...+.- +++.+++ .++|+||.+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~~~~~~~~~~~~~~~~-~~~Dl~~-~~~~~~~------~~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDNLSSGNEEFVNEAARL-VKADLAA-DDIKDYL------KGAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT-S-CEEEECCCSSCCGGGSCTTEEE-ECCCTTT-SCCHHHH------TTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-CEEEEEcCCCCChhhcCCCcEE-EECcCCh-HHHHHHh------cCCCEEEEC
Confidence 468999999999999999998864 4 55555443221000 0000000 0112222 4566666 379999986
Q ss_pred C
Q 022250 114 T 114 (300)
Q Consensus 114 T 114 (300)
.
T Consensus 71 a 71 (313)
T 3ehe_A 71 A 71 (313)
T ss_dssp C
T ss_pred C
Confidence 5
No 324
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=95.12 E-value=0.095 Score=47.40 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=26.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC------cEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG------MEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~------~eLvg~v 67 (300)
+++|.|.|++|.+|+.+++.+.+... .++++..
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 57999999999999999999886431 6777643
No 325
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=95.11 E-value=0.038 Score=50.81 Aligned_cols=65 Identities=18% Similarity=0.154 Sum_probs=45.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -+++++ ++|+... . .. + .+.|+.. .++++++. .+|+|+...
T Consensus 142 g~~vgIiG~-G~IG~~~A~~l~~-~G~~V~-~~d~~~~--~-~~-~---~~~g~~~-~~l~ell~------~aDvV~l~~ 204 (307)
T 1wwk_A 142 GKTIGIIGF-GRIGYQVAKIANA-LGMNIL-LYDPYPN--E-ER-A---KEVNGKF-VDLETLLK------ESDVVTIHV 204 (307)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSCC--H-HH-H---HHTTCEE-CCHHHHHH------HCSEEEECC
T ss_pred CceEEEEcc-CHHHHHHHHHHHH-CCCEEE-EECCCCC--h-hh-H---hhcCccc-cCHHHHHh------hCCEEEEec
Confidence 368999998 9999999998875 578876 4676431 1 11 1 1234433 47889884 689999776
Q ss_pred Cc
Q 022250 115 DA 116 (300)
Q Consensus 115 ~p 116 (300)
+.
T Consensus 205 p~ 206 (307)
T 1wwk_A 205 PL 206 (307)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 326
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=95.06 E-value=0.081 Score=49.56 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=45.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++.+ +|+.. .+... . .++...++++++++ .+|+|+-..
T Consensus 173 gktvGIIGl-G~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~~~-~-----~g~~~~~~l~ell~------~sDvV~l~~ 235 (345)
T 4g2n_A 173 GRRLGIFGM-GRIGRAIATRARG-FGLAIHY-HNRTR--LSHAL-E-----EGAIYHDTLDSLLG------ASDIFLIAA 235 (345)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHT-TTCEEEE-ECSSC--CCHHH-H-----TTCEECSSHHHHHH------TCSEEEECS
T ss_pred CCEEEEEEe-ChhHHHHHHHHHH-CCCEEEE-ECCCC--cchhh-h-----cCCeEeCCHHHHHh------hCCEEEEec
Confidence 368999997 9999999998874 5888775 77643 11111 1 14444579999995 789998666
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 236 P 236 (345)
T 4g2n_A 236 P 236 (345)
T ss_dssp C
T ss_pred C
Confidence 4
No 327
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.05 E-value=0.15 Score=45.90 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=27.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (300)
|||.|.|++|.+|+.+++.+.+.. +.++++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~ 36 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINID 36 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 689999999999999999988753 58887754
No 328
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.03 E-value=0.055 Score=49.67 Aligned_cols=68 Identities=21% Similarity=0.257 Sum_probs=41.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEEecCC--CCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~--~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVV 110 (300)
|+||+|+|+ |.||..++..+... ++ +|+ .+|.+. .|. +.++... ....+..+.|++ .+ .++|+|
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~-g~~~ev~-L~Di~~~~~g~-a~dl~~~-~~~~i~~t~d~~-~l------~~aD~V 81 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAK-GIADRLV-LLDLSEGTKGA-TMDLEIF-NLPNVEISKDLS-AS------AHSKVV 81 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHH-TCCSEEE-EECCC-----C-HHHHHHH-TCTTEEEESCGG-GG------TTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhc-CCCCEEE-EEcCCcchHHH-HHHHhhh-cCCCeEEeCCHH-HH------CCCCEE
Confidence 589999998 99999999888643 44 554 577543 111 1122211 112455667884 44 489999
Q ss_pred EEcC
Q 022250 111 IDFT 114 (300)
Q Consensus 111 IDfT 114 (300)
|...
T Consensus 82 i~aa 85 (303)
T 2i6t_A 82 IFTV 85 (303)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9654
No 329
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=95.02 E-value=0.22 Score=44.86 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=26.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc--CC---cEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA--RG---MEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~---~eLvg~v 67 (300)
|||.|.|++|.+|+.+++.+.+. ++ .++++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~ 37 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD 37 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEE
Confidence 48999999999999999998864 26 8888754
No 330
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=95.01 E-value=0.078 Score=53.28 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=29.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
++++|.|.|++|.+|+.+++.+.+.++.++++...
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999999999999999998766788887543
No 331
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.99 E-value=0.098 Score=50.72 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=68.7
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC-------CCc------chhhhhcC-cCCCCcceecCHHHHH
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------VGE------DIGMVCDM-EQPLEIPVMSDLTMVL 98 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-------~g~------d~~~~~g~-~~~~gv~v~~dl~~~l 98 (300)
+.|.+|+|+|. |-||--++-.+.+ .+++++| +|.+. .|+ ...+++.- -.......++|.++++
T Consensus 19 ~~m~~IaViGl-GYVGLp~A~~~A~-~G~~V~g-~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai 95 (444)
T 3vtf_A 19 SHMASLSVLGL-GYVGVVHAVGFAL-LGHRVVG-YDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAV 95 (444)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHH-HTCEEEE-ECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHH
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHh-CCCcEEE-EECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHH
Confidence 44789999997 9999998887764 5888886 56321 011 01111100 0112244567888877
Q ss_pred hcccccCCccEEEEcC-Cc------------hhHHHHHHHHHH---cCCCEEEeCC---CCCHHHHHH-HHHHhhhCCCe
Q 022250 99 GSISQSKARAVVIDFT-DA------------STVYDNVKQATA---FGMRSVVYVP---HIQLETVSA-LSAFCDKASMG 158 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT-~p------------~~~~~~~~~al~---~G~~vVigTT---G~~~e~~~~-L~~~a~~~~i~ 158 (300)
+ .+|+++.+- +| +.+.+.+...++ .|.=||+.+| |.+++-... |++........
T Consensus 96 ~------~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~ 169 (444)
T 3vtf_A 96 A------ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFS 169 (444)
T ss_dssp H------TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCE
T ss_pred h------cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCce
Confidence 4 678887653 12 122233333343 2455666666 777654333 33322223367
Q ss_pred EEEcCCCc
Q 022250 159 CLIAPTLS 166 (300)
Q Consensus 159 iv~a~N~S 166 (300)
+.++|=|=
T Consensus 170 v~~~PErl 177 (444)
T 3vtf_A 170 VASNPEFL 177 (444)
T ss_dssp EEECCCCC
T ss_pred eecCcccc
Confidence 77887663
No 332
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.95 E-value=0.1 Score=47.94 Aligned_cols=72 Identities=18% Similarity=0.132 Sum_probs=43.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCcCCCCccee---cCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM---SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~---~dl~~~l~~~~~~~~~DVVI 111 (300)
|||+|+|++|.+|+.++..+....- .+| ..+|.+..-..+.++.....+..+..+ +|+++++ .++|+||
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev-~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~------~~aDvVv 73 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRL-TLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL------KGCDVVV 73 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEE-EEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH------TTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEE-EEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHh------CCCCEEE
Confidence 5999999889999999998875432 354 457764310111122211111123332 4788877 4899998
Q ss_pred EcC
Q 022250 112 DFT 114 (300)
Q Consensus 112 DfT 114 (300)
...
T Consensus 74 i~a 76 (314)
T 1mld_A 74 IPA 76 (314)
T ss_dssp ECC
T ss_pred ECC
Confidence 653
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.91 E-value=0.15 Score=47.17 Aligned_cols=71 Identities=21% Similarity=0.232 Sum_probs=43.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhhc-CcCCCCcceecCHHHHHhcccccCC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~~~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
|++||+|+|+ |.||..++..+... ++ + +..+|.+.. + .+...... ......+..++|+ +.+ .+
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~-g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al------~~ 82 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQK-DLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYL------QN 82 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHT-TCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGG------TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHH------CC
Confidence 4579999998 99999999887754 55 7 677886531 1 01111000 0012234455787 555 47
Q ss_pred ccEEEEcC
Q 022250 107 RAVVIDFT 114 (300)
Q Consensus 107 ~DVVIDfT 114 (300)
+|+||...
T Consensus 83 aD~VI~av 90 (328)
T 2hjr_A 83 SDVVIITA 90 (328)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcC
Confidence 89999765
No 334
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=94.91 E-value=0.16 Score=46.19 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=27.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|||.|.|++|.+|+.+++.+.+..+.++++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~ 32 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEe
Confidence 47999999999999999999876578888754
No 335
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.91 E-value=0.029 Score=52.70 Aligned_cols=76 Identities=26% Similarity=0.393 Sum_probs=43.6
Q ss_pred CCCC-CcceEEEEcCCchHHHHHHHHHHhcCCc------EEEEEEecCCC-----CcchhhhhcCcCCC--CcceecCHH
Q 022250 30 NPPQ-SNIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSHSV-----GEDIGMVCDMEQPL--EIPVMSDLT 95 (300)
Q Consensus 30 ~~~~-~~ikV~V~Ga~GrMG~~i~~~i~~~~~~------eLvg~vd~~~~-----g~d~~~~~g~~~~~--gv~v~~dl~ 95 (300)
.|++ ..+||+|+||+|.+|+.++-.++..+-+ +| ..+|.+.. |.. -++..+..+. .+.+.++..
T Consensus 18 ~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL-~L~Di~~~~~~~~Gva-~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 18 GPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVEL-RLLDIEPALKALAGVE-AELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp ----CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEE-EEECCGGGHHHHHHHH-HHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEE-EEECCCCccccchhhh-hhhhhcCccCCCcEEEcCChH
Confidence 3443 3699999999899999999888764422 44 45775321 111 1121111111 334557777
Q ss_pred HHHhcccccCCccEEEEc
Q 022250 96 MVLGSISQSKARAVVIDF 113 (300)
Q Consensus 96 ~~l~~~~~~~~~DVVIDf 113 (300)
+.+ .++|+||..
T Consensus 96 ~a~------~~advVvi~ 107 (345)
T 4h7p_A 96 VAF------DGVAIAIMC 107 (345)
T ss_dssp HHT------TTCSEEEEC
T ss_pred HHh------CCCCEEEEC
Confidence 777 478988854
No 336
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.89 E-value=0.062 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=26.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
|.+|.|.|++|.+|+.+++.+.+ .+.+++. +++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~-~G~~V~~-~~r 35 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAP-MAEILRL-ADL 35 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGG-GEEEEEE-EES
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-cCCEEEE-Eec
Confidence 46799999999999999999875 4677665 444
No 337
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=94.87 E-value=0.042 Score=50.30 Aligned_cols=61 Identities=18% Similarity=0.065 Sum_probs=44.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. ... ..+...++++++++ .+|+|+-..
T Consensus 122 g~tvGIIGl-G~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~---------~~~~~~~~l~ell~------~aDiV~l~~ 181 (290)
T 3gvx_A 122 GKALGILGY-GGIGRRVAHLAKA-FGMRVIA-YTRSS--VDQ---------NVDVISESPADLFR------QSDFVLIAI 181 (290)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-HTCEEEE-ECSSC--CCT---------TCSEECSSHHHHHH------HCSEEEECC
T ss_pred cchheeecc-CchhHHHHHHHHh-hCcEEEE-Eeccc--ccc---------ccccccCChHHHhh------ccCeEEEEe
Confidence 478999998 9999999998875 4888775 56542 111 11234568999985 789998666
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 182 P 182 (290)
T 3gvx_A 182 P 182 (290)
T ss_dssp C
T ss_pred e
Confidence 4
No 338
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.87 E-value=0.032 Score=53.08 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=53.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhcCcCCCCcce--ecCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~~~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVVI 111 (300)
..+|+|+|+ |.||+.+++.+... ++ +++ +++++. ..+.+++ ..+|..+ ++++++++. .+|+||
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~-G~~~V~-v~~r~~--~ra~~la---~~~g~~~~~~~~l~~~l~------~aDvVi 232 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDR-GVRAVL-VANRTY--ERAVELA---RDLGGEAVRFDELVDHLA------RSDVVV 232 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHH-CCSEEE-EECSSH--HHHHHHH---HHHTCEECCGGGHHHHHH------TCSEEE
T ss_pred CCEEEEECh-HHHHHHHHHHHHHC-CCCEEE-EEeCCH--HHHHHHH---HHcCCceecHHhHHHHhc------CCCEEE
Confidence 368999998 99999999988754 66 554 466542 1221222 1122222 357777774 789999
Q ss_pred EcCCchhH---HHHHHH-HHH---cCCCEEEeCC
Q 022250 112 DFTDASTV---YDNVKQ-ATA---FGMRSVVYVP 138 (300)
Q Consensus 112 DfT~p~~~---~~~~~~-al~---~G~~vVigTT 138 (300)
++|..... .+.+.. +++ .+.-++++..
T Consensus 233 ~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 233 SATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp ECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred EccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 99853322 244444 343 2455666653
No 339
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.84 E-value=0.044 Score=50.28 Aligned_cols=72 Identities=10% Similarity=-0.015 Sum_probs=43.6
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcc--hhhhhcC----cCCCCcceecCHHHHHhcccccCCc
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED--IGMVCDM----EQPLEIPVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d--~~~~~g~----~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (300)
||+||+|+|+ |.||..++..+....-++ +..+|.+..-.+ +.++... .....+..++|+ +.+ .++
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~------~~a 71 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADT------ANS 71 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGG------TTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHH------CCC
Confidence 5689999998 999999999887654447 777886431000 1111100 011223344777 455 479
Q ss_pred cEEEEcC
Q 022250 108 AVVIDFT 114 (300)
Q Consensus 108 DVVIDfT 114 (300)
|+||...
T Consensus 72 D~Vi~a~ 78 (309)
T 1ur5_A 72 DVIVVTS 78 (309)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9999764
No 340
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.83 E-value=0.044 Score=50.45 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=54.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cCc-------CCCCcceecCHHHHHhcccccC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME-------QPLEIPVMSDLTMVLGSISQSK 105 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~--g~~-------~~~gv~v~~dl~~~l~~~~~~~ 105 (300)
+|||+|+|+ |.||..++..+.+. +.++. +++++. ....+. |.. ....+..+++++++ .
T Consensus 3 ~mkI~IiGa-G~~G~~~a~~L~~~-g~~V~-~~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~ 69 (335)
T 3ghy_A 3 LTRICIVGA-GAVGGYLGARLALA-GEAIN-VLARGA---TLQALQTAGLRLTEDGATHTLPVRATHDAAAL-------G 69 (335)
T ss_dssp CCCEEEESC-CHHHHHHHHHHHHT-TCCEE-EECCHH---HHHHHHHTCEEEEETTEEEEECCEEESCHHHH-------C
T ss_pred CCEEEEECc-CHHHHHHHHHHHHC-CCEEE-EEEChH---HHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-------C
Confidence 479999998 99999999988753 55554 344421 111110 100 01123445677764 3
Q ss_pred CccEEEEcCCchhHHHHHHHHH---HcCCCEEEeCCCC
Q 022250 106 ARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHI 140 (300)
Q Consensus 106 ~~DVVIDfT~p~~~~~~~~~al---~~G~~vVigTTG~ 140 (300)
++|+||-++.+..+.+.+.... ..+..+|.-+.|+
T Consensus 70 ~~D~Vilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 EQDVVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CCSEEEECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCCEEEEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 7899997777766555554332 2355566555674
No 341
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.83 E-value=0.076 Score=51.80 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=28.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
||||.|.|++|.+|+.+++.+.+ .+.+++++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~-~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQT-GGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECC
Confidence 58999999999999999999886 47888876543
No 342
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=94.78 E-value=0.086 Score=48.51 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=27.9
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
||++|.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLE-KGYEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHH-CCCEEEEEEC
Confidence 347899999999999999999886 4788887553
No 343
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.74 E-value=0.049 Score=49.66 Aligned_cols=73 Identities=18% Similarity=0.105 Sum_probs=41.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCCC-Ccchh-hhh-cCc-CCCCcce-ecCHHHHHhcccccCCcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSV-GEDIG-MVC-DME-QPLEIPV-MSDLTMVLGSISQSKARA 108 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~-g~d~~-~~~-g~~-~~~gv~v-~~dl~~~l~~~~~~~~~D 108 (300)
|+||+|+|+ |.||..++..+....- .+++ ++|.+.. .+... ++. +.. ....+.+ .+|+ +.+ .++|
T Consensus 1 m~kI~VIGa-G~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~------~~aD 71 (309)
T 1hyh_A 1 ARKIGIIGL-GNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AAL------ADAD 71 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG------TTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh------CCCC
Confidence 479999997 9999999998876531 4554 5665420 00000 100 000 0112344 4676 455 4789
Q ss_pred EEEEcCCc
Q 022250 109 VVIDFTDA 116 (300)
Q Consensus 109 VVIDfT~p 116 (300)
+||....+
T Consensus 72 vViiav~~ 79 (309)
T 1hyh_A 72 VVISTLGN 79 (309)
T ss_dssp EEEECCSC
T ss_pred EEEEecCC
Confidence 99977654
No 344
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=94.70 E-value=0.026 Score=52.42 Aligned_cols=64 Identities=16% Similarity=0.299 Sum_probs=43.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. .....+ .....+.+++++++ .+|+|+-..
T Consensus 137 gktvGIiGl-G~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~~~~------~~~~~~~~l~ell~------~aDvV~l~l 199 (324)
T 3evt_A 137 GQQLLIYGT-GQIGQSLAAKASA-LGMHVIG-VNTTG--HPADHF------HETVAFTATADALA------TANFIVNAL 199 (324)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-EESSC--CCCTTC------SEEEEGGGCHHHHH------HCSEEEECC
T ss_pred CCeEEEECc-CHHHHHHHHHHHh-CCCEEEE-ECCCc--chhHhH------hhccccCCHHHHHh------hCCEEEEcC
Confidence 468999998 9999999998874 5899876 66542 111111 01122467889985 789999665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 200 P 200 (324)
T 3evt_A 200 P 200 (324)
T ss_dssp C
T ss_pred C
Confidence 4
No 345
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.70 E-value=0.11 Score=47.41 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=43.0
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcch--hhhhc----CcCCCCcceecCHHHHHhcccccCC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDI--GMVCD----MEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~--~~~~g----~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
+++||+|+|+ |.||..++..+... ++ + +..+|.+..-.+. .++.. ......+..++|+ +.+ .+
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~-g~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~------~~ 72 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKD-NLAD-VVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADI------SG 72 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHH-TCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGG------TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCce-EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHh------CC
Confidence 3579999998 99999999988754 55 7 6677764310010 00000 0011234445777 455 47
Q ss_pred ccEEEEcC
Q 022250 107 RAVVIDFT 114 (300)
Q Consensus 107 ~DVVIDfT 114 (300)
+|+||...
T Consensus 73 aDiVi~av 80 (317)
T 2ewd_A 73 SDVVIITA 80 (317)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 89999765
No 346
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.67 E-value=0.033 Score=49.71 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=28.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|||.|.|+||-+|+.+++.+.+ .++++++...
T Consensus 1 MkILVTGatGfIG~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 7899999999999999999875 5899888653
No 347
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.65 E-value=0.04 Score=55.35 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=26.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
..||.|+|+ |..|..+++.+.. .++.=+.++|.
T Consensus 327 ~~kVLIVGa-GGLGs~va~~La~-aGVG~ItLvD~ 359 (598)
T 3vh1_A 327 NTKVLLLGA-GTLGCYVSRALIA-WGVRKITFVDN 359 (598)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCCEEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-cCCCEEEEECC
Confidence 368999998 9999999999874 57765667874
No 348
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.64 E-value=0.094 Score=48.98 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=26.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
..||.|+|+ |..|..+++.+.. .++.=+-++|.
T Consensus 36 ~~~VlivG~-GGlG~~ia~~La~-~Gvg~itlvD~ 68 (346)
T 1y8q_A 36 ASRVLLVGL-KGLGAEIAKNLIL-AGVKGLTMLDH 68 (346)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-HTCSEEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-cCCCEEEEEEC
Confidence 368999998 9999999999874 46644556764
No 349
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.62 E-value=0.071 Score=49.96 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=26.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
.-||.|+|+ |..|..+++.+.. .++.=+.++|.
T Consensus 118 ~~~VlvvG~-GglGs~va~~La~-aGvg~i~lvD~ 150 (353)
T 3h5n_A 118 NAKVVILGC-GGIGNHVSVILAT-SGIGEIILIDN 150 (353)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-HTCSEEEEEEC
T ss_pred CCeEEEECC-CHHHHHHHHHHHh-CCCCeEEEECC
Confidence 368999998 9999999999875 46544556774
No 350
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=94.59 E-value=0.1 Score=48.38 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=61.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -+++++ ++|+... ..+ ... + .+.++++++. .+|+|+...
T Consensus 145 g~~vgIiG~-G~IG~~~A~~l~~-~G~~V~-~~d~~~~-~~~-------~~~-~-~~~~l~ell~------~aDvV~~~~ 205 (333)
T 1dxy_A 145 QQTVGVMGT-GHIGQVAIKLFKG-FGAKVI-AYDPYPM-KGD-------HPD-F-DYVSLEDLFK------QSDVIDLHV 205 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSCC-SSC-------CTT-C-EECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEE-EECCCcc-hhh-------Hhc-c-ccCCHHHHHh------cCCEEEEcC
Confidence 368999998 9999999998874 588876 4775431 111 111 2 2458999985 789999766
Q ss_pred Cchh-HH----HHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCe
Q 022250 115 DAST-VY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMG 158 (300)
Q Consensus 115 ~p~~-~~----~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~ 158 (300)
+... +. +.....++.|.-+|--.+|--. ..+.|.++.++.++.
T Consensus 206 P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v-d~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 206 PGIEQNTHIINEAAFNLMKPGAIVINTARPNLI-DTQAMLSNLKSGKLA 253 (333)
T ss_dssp CCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSB-CHHHHHHHHHTTSEE
T ss_pred CCchhHHHHhCHHHHhhCCCCcEEEECCCCccc-CHHHHHHHHHhCCcc
Confidence 4322 11 2223344455444443444221 224567776665543
No 351
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.53 E-value=0.094 Score=50.14 Aligned_cols=62 Identities=23% Similarity=0.080 Sum_probs=44.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+... .. ..++....++++++. .+|+|+-..
T Consensus 145 gktlGiIGl-G~IG~~vA~~l~~-~G~~V~~-~d~~~~-~~---------~~~~~~~~~l~ell~------~aDvV~l~~ 205 (404)
T 1sc6_A 145 GKKLGIIGY-GHIGTQLGILAES-LGMYVYF-YDIENK-LP---------LGNATQVQHLSDLLN------MSDVVSLHV 205 (404)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSCC-CC---------CTTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHH-CCCEEEE-EcCCch-hc---------cCCceecCCHHHHHh------cCCEEEEcc
Confidence 368999998 9999999998874 5898764 776421 00 112344568999985 689998765
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 206 P 206 (404)
T 1sc6_A 206 P 206 (404)
T ss_dssp C
T ss_pred C
Confidence 4
No 352
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.52 E-value=0.11 Score=47.71 Aligned_cols=122 Identities=11% Similarity=0.154 Sum_probs=60.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCC-cchhh-hhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-EDIGM-VCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g-~d~~~-~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
..||.|+|+ |..|..+++.+... ++-=+.++|.+..- .+... +... ...|-+-.....+.+.+ -++|+-|+
T Consensus 36 ~~~VlVvGa-GGlGs~va~~La~a-GVG~i~lvD~D~Ve~sNL~Rq~~~~-~diG~~Ka~aa~~~L~~----iNP~v~v~ 108 (292)
T 3h8v_A 36 TFAVAIVGV-GGVGSVTAEMLTRC-GIGKLLLFDYDKVELANMNRLFFQP-HQAGLSKVQAAEHTLRN----INPDVLFE 108 (292)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHHH-TCSEEEEECCCBC-------------CCTTSBHHHHHHHHHHH----HCTTSEEE
T ss_pred CCeEEEECc-CHHHHHHHHHHHHc-CCCEEEEECCCccChhhcccccCCh-hhcCchHHHHHHHHHHh----hCCCcEEE
Confidence 468999998 99999999998754 55445567753210 01110 1100 11121111222222221 35565554
Q ss_pred cCCchhH-HHHHHHHHH----------cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCC
Q 022250 113 FTDASTV-YDNVKQATA----------FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (300)
Q Consensus 113 fT~p~~~-~~~~~~al~----------~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N 164 (300)
.-..... .+++...++ .+.++|+..|.- .+....|.++|.+.++|++++..
T Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-~~~R~~in~~c~~~~~Pli~~gv 170 (292)
T 3h8v_A 109 VHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-FEARMTINTACNELGQTWMESGV 170 (292)
T ss_dssp EECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-hhhhhHHHHHHHHhCCCEEEeee
Confidence 3221111 122332221 467788766632 23345677777777788776544
No 353
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=94.46 E-value=0.068 Score=51.74 Aligned_cols=136 Identities=15% Similarity=0.090 Sum_probs=80.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCcCCCC-c-----ceecCHHHHHhcccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I-----PVMSDLTMVLGSISQ 103 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~~~~~g~~~~~g-v-----~v~~dl~~~l~~~~~ 103 (300)
..||+|.|. |++|+..++.+.+ .+..+|++.|+. +.|-|...+.......+ + ..+-+.++++.
T Consensus 235 g~~vaVqGf-GnVG~~~a~~L~e-~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~---- 308 (440)
T 3aog_A 235 GARVAIQGF-GNVGNAAARAFHD-HGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG---- 308 (440)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT----
T ss_pred CCEEEEecc-CHHHHHHHHHHHH-CCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc----
Confidence 378999997 9999999998875 589999999962 33444443321100111 0 11224567765
Q ss_pred cCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCc---HHHHHH-HHHH
Q 022250 104 SKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLS---IGSILL-QQAA 176 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~S---iGv~ll-~~~a 176 (300)
.++||+|.++.+... .+++. +.+..+|++-- .++++..+.| +++|+ ++.|-+. =||..- .+..
T Consensus 309 -~~~DIlvPcA~~n~i~~~na~---~l~ak~VvEgAN~p~t~eA~~iL----~~~GI--~~~PD~~aNaGGV~vS~~E~~ 378 (440)
T 3aog_A 309 -LPVEFLVPAALEKQITEQNAW---RIRARIVAEGANGPTTPAADDIL----LEKGV--LVVPDVIANAGGVTVSYFEWV 378 (440)
T ss_dssp -CCCSEEEECSSSSCBCTTTGG---GCCCSEEECCSSSCBCHHHHHHH----HHHTC--EEECHHHHTTHHHHHHHHHHH
T ss_pred -CCCcEEEecCCcCccchhhHH---HcCCcEEEecCccccCHHHHHHH----HHCCC--EEEChHHHhCCCceEEEEEEE
Confidence 689999999865443 33333 34888998865 3565433333 34444 5555443 254432 3455
Q ss_pred HHhccCCCCe
Q 022250 177 ISASFHYKNV 186 (300)
Q Consensus 177 ~~~~~~~~di 186 (300)
+.+..++|+-
T Consensus 379 qN~~~~~w~~ 388 (440)
T 3aog_A 379 QDFNSYFWTE 388 (440)
T ss_dssp HHTTTCCCCH
T ss_pred ecCccCcCCH
Confidence 5555556654
No 354
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.43 E-value=0.15 Score=49.79 Aligned_cols=137 Identities=12% Similarity=0.142 Sum_probs=84.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-----CCCCc---chhhhhcCcCC-------C-----CcceecCHH
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGE---DIGMVCDMEQP-------L-----EIPVMSDLT 95 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-----~~~g~---d~~~~~g~~~~-------~-----gv~v~~dl~ 95 (300)
.+|+|.|. |++|+..++.+.+ .+.++|++.|+ ++.|- |+..+...... + +....+ .+
T Consensus 253 ~~vaVqG~-GnVG~~~a~~L~~-~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~-~~ 329 (470)
T 2bma_A 253 QTAVVSGS-GNVALYCVQKLLH-LNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFP-NE 329 (470)
T ss_dssp CEEEEECS-SHHHHHHHHHHHH-TTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECS-SC
T ss_pred CEEEEECC-cHHHHHHHHHHHH-CCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEec-Cc
Confidence 78999997 9999999998875 59999999994 34454 33222110000 0 222221 13
Q ss_pred HHHhcccccCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCcH---HH
Q 022250 96 MVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---GS 169 (300)
Q Consensus 96 ~~l~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~Si---Gv 169 (300)
+++. .++||.+-+..+... .+++...++++..+|++-- .++++.. +.-+++| +++.|-+.. ||
T Consensus 330 ~~~~-----~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~----~~L~~rG--Il~~PD~~aNAGGV 398 (470)
T 2bma_A 330 KPWG-----VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAI----NLFKSNN--IIYCPSKAANAGGV 398 (470)
T ss_dssp CTTS-----SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHH----HHHHHTT--CEEECHHHHTTHHH
T ss_pred Ceee-----cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHH----HHHHHCC--cEEEChHHhhCCCc
Confidence 4453 689999998866554 7788888889999999865 3566542 2234444 466665442 44
Q ss_pred HHH-HHHHHHhccCCCCe
Q 022250 170 ILL-QQAAISASFHYKNV 186 (300)
Q Consensus 170 ~ll-~~~a~~~~~~~~di 186 (300)
..- .+..+.+..+.|+.
T Consensus 399 ~~S~~E~~qn~~~~~w~~ 416 (470)
T 2bma_A 399 AISGLEMSQNFQFSHWTR 416 (470)
T ss_dssp HHHHHHHHHHHTTCCCCH
T ss_pred eeeHHHhhccccccCCCH
Confidence 432 34455555555653
No 355
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=94.42 E-value=0.057 Score=50.18 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=43.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -++++. ++|+... ..+. .. +...+++++++. .+|+|+...
T Consensus 146 g~~vgIiG~-G~IG~~~A~~l~~-~G~~V~-~~d~~~~-~~~~-------~~-~~~~~~l~ell~------~aDvV~l~~ 207 (333)
T 1j4a_A 146 DQVVGVVGT-GHIGQVFMQIMEG-FGAKVI-TYDIFRN-PELE-------KK-GYYVDSLDDLYK------QADVISLHV 207 (333)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSSCC-HHHH-------HT-TCBCSCHHHHHH------HCSEEEECS
T ss_pred CCEEEEEcc-CHHHHHHHHHHHH-CCCEEE-EECCCcc-hhHH-------hh-CeecCCHHHHHh------hCCEEEEcC
Confidence 368999998 9999999998874 578876 4675431 1111 11 223348899885 689999776
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 208 p 208 (333)
T 1j4a_A 208 P 208 (333)
T ss_dssp C
T ss_pred C
Confidence 5
No 356
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=94.42 E-value=0.18 Score=48.15 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=61.1
Q ss_pred eEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-eecCHHHHHhcccc
Q 022250 25 ISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQ 103 (300)
Q Consensus 25 ~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~~dl~~~l~~~~~ 103 (300)
+--...|..|++||+|+|. |.-...+++.+.+..+++.+.+.+.+. +. ..+. ...-++ -+.|.+++++- .+
T Consensus 14 ~~~~~~~~~m~~~IlIlG~-g~r~~al~~~~a~~~g~~~v~~~~~~~-~~--~~~~---~~~~~~~~~~d~~~l~~~-~~ 85 (452)
T 2qk4_A 14 GTENLYFQSMAARVLIIGS-GGREHTLAWKLAQSHHVKQVLVAPGNA-GT--ACSE---KISNTAISISDHTALAQF-CK 85 (452)
T ss_dssp --------CCSEEEEEEEC-SHHHHHHHHHHTTCTTEEEEEEEECCG-GG--SBSS---SEEECCCCSSCHHHHHHH-HH
T ss_pred ccccccccccCcEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCh-hh--hhhc---cccccccCCCCHHHHHHH-HH
Confidence 3334445456789999997 632234556666667887654433221 11 0111 000111 14566666531 22
Q ss_pred cCCccEEEEcCCchhH--HHHHHHHHHcCCCEEEeCC--CCCH-HHHHHHHHHhhhCCCeE
Q 022250 104 SKARAVVIDFTDASTV--YDNVKQATAFGMRSVVYVP--HIQL-ETVSALSAFCDKASMGC 159 (300)
Q Consensus 104 ~~~~DVVIDfT~p~~~--~~~~~~al~~G~~vVigTT--G~~~-e~~~~L~~~a~~~~i~i 159 (300)
..++|+|+-. ++.. ...+..+.+.|++++ |.+ .... ......++++++.|+|+
T Consensus 86 ~~~~d~V~~~--~E~~~~~~~~~~l~~~gi~~~-g~~~~~~~~~~dK~~~k~~l~~~gip~ 143 (452)
T 2qk4_A 86 EKKIEFVVVG--PEAPLAAGIVGNLRSAGVQCF-GPTAEAAQLESSKRFAKEFMDRHGIPT 143 (452)
T ss_dssp HHTCCEEEEC--SSHHHHTTHHHHHHHTTCCEE-SCCTTTTHHHHBHHHHHHHHHHTTCCB
T ss_pred HcCCCEEEEC--CcHHHHHHHHHHHHhcCCcEe-CcCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 3468988743 2332 245555667899977 333 2221 23445667788888774
No 357
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.41 E-value=0.059 Score=50.05 Aligned_cols=72 Identities=21% Similarity=0.213 Sum_probs=41.4
Q ss_pred CCCC-cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCC---Cc--chhh---hhcCcCCCCcceecCHHHHHhc
Q 022250 31 PPQS-NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---GE--DIGM---VCDMEQPLEIPVMSDLTMVLGS 100 (300)
Q Consensus 31 ~~~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g~--d~~~---~~g~~~~~gv~v~~dl~~~l~~ 100 (300)
|..| ++||+|+|+ |.||..++..+... ++ +|+ .+|.+.. |. |... +.+ .+..+..++|+ +.+
T Consensus 2 ~~~m~~~kI~viGa-G~vG~~~a~~l~~~-~~~~v~-L~Di~~~~~~g~~~dl~~~~~~~~--~~~~v~~t~d~-~a~-- 73 (324)
T 3gvi_A 2 PGSMARNKIALIGS-GMIGGTLAHLAGLK-ELGDVV-LFDIAEGTPQGKGLDIAESSPVDG--FDAKFTGANDY-AAI-- 73 (324)
T ss_dssp ----CCCEEEEECC-SHHHHHHHHHHHHT-TCCEEE-EECSSSSHHHHHHHHHHHHHHHHT--CCCCEEEESSG-GGG--
T ss_pred CCCCcCCEEEEECC-CHHHHHHHHHHHhC-CCCeEE-EEeCCchhHHHHHHHHhchhhhcC--CCCEEEEeCCH-HHH--
Confidence 4444 579999998 99999999887754 45 644 6775431 11 1111 111 12234445677 455
Q ss_pred ccccCCccEEEEcC
Q 022250 101 ISQSKARAVVIDFT 114 (300)
Q Consensus 101 ~~~~~~~DVVIDfT 114 (300)
.++|+||...
T Consensus 74 ----~~aDiVIiaa 83 (324)
T 3gvi_A 74 ----EGADVVIVTA 83 (324)
T ss_dssp ----TTCSEEEECC
T ss_pred ----CCCCEEEEcc
Confidence 4799998654
No 358
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=94.34 E-value=0.18 Score=46.50 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=26.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|+|.|.|++|.+|+.+++.+.+..+.+++++.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~ 34 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 58999999999999999998823578888754
No 359
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=94.34 E-value=0.069 Score=49.77 Aligned_cols=65 Identities=17% Similarity=0.182 Sum_probs=45.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+... .+ . + ...|+. +.++++++. .+|+|+...
T Consensus 165 g~tvgIIGl-G~IG~~vA~~l~~-~G~~V~~-~d~~~~-~~--~-~---~~~g~~-~~~l~ell~------~aDvV~l~~ 227 (335)
T 2g76_A 165 GKTLGILGL-GRIGREVATRMQS-FGMKTIG-YDPIIS-PE--V-S---ASFGVQ-QLPLEEIWP------LCDFITVHT 227 (335)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCEEEE-ECSSSC-HH--H-H---HHTTCE-ECCHHHHGG------GCSEEEECC
T ss_pred cCEEEEEeE-CHHHHHHHHHHHH-CCCEEEE-ECCCcc-hh--h-h---hhcCce-eCCHHHHHh------cCCEEEEec
Confidence 368999997 9999999998874 5788764 675431 11 1 1 123443 358999884 789999776
Q ss_pred Cc
Q 022250 115 DA 116 (300)
Q Consensus 115 ~p 116 (300)
+.
T Consensus 228 P~ 229 (335)
T 2g76_A 228 PL 229 (335)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 360
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.29 E-value=0.064 Score=49.50 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=41.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhc-CCcEEEEEEecCC--CCcchhhhhcCcCCCCccee----cCHHHHHhcccccCCcc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARA 108 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~--~g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~D 108 (300)
|||+|+||+|.+|+.++..+... +-..=+..+|.+. .|+ +-++... ++.+.+. ++..+.+ .++|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~-a~Dl~~~--~~~~~v~~~~~~~~~~~~------~~aD 71 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV-AVDLSHI--PTAVKIKGFSGEDATPAL------EGAD 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHH-HHHHHTS--CSSEEEEEECSSCCHHHH------TTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhH-HHHhhCC--CCCceEEEecCCCcHHHh------CCCC
Confidence 69999997799999999988765 3333344677643 111 1223322 2333443 2344455 4899
Q ss_pred EEEEcC
Q 022250 109 VVIDFT 114 (300)
Q Consensus 109 VVIDfT 114 (300)
+||...
T Consensus 72 ivii~a 77 (312)
T 3hhp_A 72 VVLISA 77 (312)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 998543
No 361
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=94.25 E-value=0.1 Score=48.49 Aligned_cols=64 Identities=17% Similarity=0.267 Sum_probs=43.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. +....+ .+...+.+++++++ .+|+|+-..
T Consensus 140 g~tvGIIGl-G~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~~~~------~~~~~~~~l~ell~------~aDvV~l~l 202 (324)
T 3hg7_A 140 GRTLLILGT-GSIGQHIAHTGKH-FGMKVLG-VSRSG--RERAGF------DQVYQLPALNKMLA------QADVIVSVL 202 (324)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSC--CCCTTC------SEEECGGGHHHHHH------TCSEEEECC
T ss_pred cceEEEEEE-CHHHHHHHHHHHh-CCCEEEE-EcCCh--HHhhhh------hcccccCCHHHHHh------hCCEEEEeC
Confidence 478999998 9999999998875 5888775 66542 111111 11122468999985 789998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 203 P 203 (324)
T 3hg7_A 203 P 203 (324)
T ss_dssp C
T ss_pred C
Confidence 4
No 362
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.24 E-value=0.13 Score=41.37 Aligned_cols=120 Identities=13% Similarity=0.169 Sum_probs=62.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCC--CcchhhhhcCcCCCCccee----cCHHHHHhcccccCCcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARA 108 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~--g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~D 108 (300)
..+|.|+|+ |++|+.+++.+.+ .+.+++. +|++.. -+.+.+.. +.++.+. .+.+.+.+. .-.++|
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~-~g~~V~v-id~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a--~i~~ad 73 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQ-RGQNVTV-ISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA--GIDRCR 73 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHH-TTCCEEE-EECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH--TTTTCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHH-CCCCEEE-EECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHc--ChhhCC
Confidence 357999998 9999999998875 4677665 454310 00111111 1233322 222222110 014789
Q ss_pred EEEEcCCchhH-HHHHHHHHHc-C-CCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHH
Q 022250 109 VVIDFTDASTV-YDNVKQATAF-G-MRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (300)
Q Consensus 109 VVIDfT~p~~~-~~~~~~al~~-G-~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv 169 (300)
+||-.+..+.. ......+.+. + .++|+-.... +..+.| ++.|+..++.|....+-
T Consensus 74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~--~~~~~l----~~~G~~~vi~p~~~~~~ 131 (153)
T 1id1_A 74 AILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS--KNLNKI----KMVHPDIILSPQLFGSE 131 (153)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG--GGHHHH----HTTCCSEEECHHHHHHH
T ss_pred EEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCH--HHHHHH----HHcCCCEEEcHHHHHHH
Confidence 99877765544 3333444444 4 3555433332 333333 44567677777655553
No 363
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=94.23 E-value=0.14 Score=45.52 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=26.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|||.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 31 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVD 31 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHh-CCCEEEEEe
Confidence 5899999999999999999885 478887653
No 364
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.21 E-value=0.054 Score=53.50 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=46.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.++|+|+|+ |+||+.+++.+.. -++++++ +|+... .+ . + ...|+... ++++++. .+|+|+-.+
T Consensus 142 g~~vgIIG~-G~IG~~vA~~l~~-~G~~V~~-~d~~~~-~~--~-a---~~~g~~~~-~l~e~~~------~aDvV~l~~ 204 (529)
T 1ygy_A 142 GKTVGVVGL-GRIGQLVAQRIAA-FGAYVVA-YDPYVS-PA--R-A---AQLGIELL-SLDDLLA------RADFISVHL 204 (529)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCEEEE-ECTTSC-HH--H-H---HHHTCEEC-CHHHHHH------HCSEEEECC
T ss_pred CCEEEEEee-CHHHHHHHHHHHh-CCCEEEE-ECCCCC-hh--H-H---HhcCcEEc-CHHHHHh------cCCEEEECC
Confidence 478999997 9999999998875 5788765 676431 11 1 1 12344433 7888885 789999887
Q ss_pred Cch
Q 022250 115 DAS 117 (300)
Q Consensus 115 ~p~ 117 (300)
++.
T Consensus 205 P~~ 207 (529)
T 1ygy_A 205 PKT 207 (529)
T ss_dssp CCS
T ss_pred CCc
Confidence 665
No 365
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=94.17 E-value=0.087 Score=49.75 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=44.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+. .-++++++ +|+.. .. ... ...|+. +.+++++++ .+|+|+-..
T Consensus 176 gktvGIIGl-G~IG~~vA~~l~-~fG~~V~~-~d~~~--~~-~~~----~~~g~~-~~~l~ell~------~aDvV~l~~ 238 (365)
T 4hy3_A 176 GSEIGIVGF-GDLGKALRRVLS-GFRARIRV-FDPWL--PR-SML----EENGVE-PASLEDVLT------KSDFIFVVA 238 (365)
T ss_dssp SSEEEEECC-SHHHHHHHHHHT-TSCCEEEE-ECSSS--CH-HHH----HHTTCE-ECCHHHHHH------SCSEEEECS
T ss_pred CCEEEEecC-CcccHHHHHhhh-hCCCEEEE-ECCCC--CH-HHH----hhcCee-eCCHHHHHh------cCCEEEEcC
Confidence 368999997 999999999876 45888774 67542 11 111 123333 468999995 789999765
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 239 P 239 (365)
T 4hy3_A 239 A 239 (365)
T ss_dssp C
T ss_pred c
Confidence 4
No 366
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.16 E-value=0.37 Score=41.79 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=52.2
Q ss_pred ecCCCCC-cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 28 STNPPQS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 28 ~~~~~~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
..+++++ ..+|.|.|++|.+|+.+++.+.+ .+.+++.+ +++. ....++. +.+. ..
T Consensus 4 ~~~~~~~~~k~vlVTGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~~~~~---------------~~~~-----~~ 59 (265)
T 2o23_A 4 AAACRSVKGLVAVITGGASGLGLATAERLVG-QGASAVLL-DLPN--SGGEAQA---------------KKLG-----NN 59 (265)
T ss_dssp ----CCCTTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ECTT--SSHHHHH---------------HHHC-----TT
T ss_pred cccccCCCCCEEEEECCCChHHHHHHHHHHH-CCCEEEEE-eCCc--HhHHHHH---------------HHhC-----Cc
Confidence 3344433 35799999999999999999885 47887754 4432 1111110 1111 12
Q ss_pred cc-EEEEcCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 107 RA-VVIDFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 107 ~D-VVIDfT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
+. +..|.+.++...+.+..+.+. ++++|+-..|
T Consensus 60 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag 95 (265)
T 2o23_A 60 CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAG 95 (265)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCc
Confidence 22 345788888777766655543 6888887665
No 367
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.15 E-value=0.3 Score=44.12 Aligned_cols=119 Identities=18% Similarity=0.152 Sum_probs=64.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..|+.|+|+ |.||+.++..+.+. +.++. +++++. ..+.+++ +.++... +++++ .++|+||..|
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~-G~~v~-V~nRt~--~ka~~la----~~~~~~~-~~~~l-------~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQ-GLQVS-VLNRSS--RGLDFFQ----RLGCDCF-MEPPK-------SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCEEE-EECSSC--TTHHHHH----HHTCEEE-SSCCS-------SCCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCEEE-EEeCCH--HHHHHHH----HCCCeEe-cHHHh-------ccCCEEEEcc
Confidence 368999998 99999999998865 46654 566653 2333332 1122221 22222 2689999887
Q ss_pred Cch-----hH-HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh
Q 022250 115 DAS-----TV-YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (300)
Q Consensus 115 ~p~-----~~-~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~ 179 (300)
+.. .. .+.+...+..+. +|+-.. +++ + -.+.+.|++.|++++- .+++ |+.|++.++
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~-~v~D~v-Y~P-~-T~ll~~A~~~G~~~~~----Gl~M-Lv~Qa~~~f 242 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGK-LAYDLA-YGF-L-TPFLSLAKELKTPFQD----GKDM-LIYQAALSF 242 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCS-EEEESC-CSS-C-CHHHHHHHHTTCCEEC----SHHH-HHHHHHHHH
T ss_pred cCCCCCCCCCChHHHHhhCCCCC-EEEEeC-CCC-c-hHHHHHHHHCcCEEEC----CHHH-HHHHHHHHH
Confidence 532 12 222232455544 443322 122 2 2366777888877553 4453 345555443
No 368
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=94.14 E-value=0.062 Score=50.45 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=46.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. ..... ...|+...+++++++. .+|+|+-..
T Consensus 160 g~tvGIIGl-G~IG~~vA~~l~~-~G~~V~~-~d~~~---~~~~~----~~~g~~~~~~l~ell~------~aDiV~l~~ 223 (352)
T 3gg9_A 160 GQTLGIFGY-GKIGQLVAGYGRA-FGMNVLV-WGREN---SKERA----RADGFAVAESKDALFE------QSDVLSVHL 223 (352)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSHH---HHHHH----HHTTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHh-CCCEEEE-ECCCC---CHHHH----HhcCceEeCCHHHHHh------hCCEEEEec
Confidence 368999997 9999999998875 5888775 66531 11111 1245555679999985 689998765
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 224 P 224 (352)
T 3gg9_A 224 R 224 (352)
T ss_dssp C
T ss_pred c
Confidence 4
No 369
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.12 E-value=0.17 Score=46.56 Aligned_cols=87 Identities=17% Similarity=0.102 Sum_probs=50.0
Q ss_pred cceEEEEcCCchHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee--cCHHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DVVI 111 (300)
|.||.++|. |++|.. +++.+. ..++++.+ .|..........+ .+.|++++ .+.+.+.+ .++|+||
T Consensus 4 ~~~i~~iGi-Gg~Gms~~A~~L~-~~G~~V~~-~D~~~~~~~~~~L----~~~gi~v~~g~~~~~l~~-----~~~d~vV 71 (326)
T 3eag_A 4 MKHIHIIGI-GGTFMGGLAAIAK-EAGFEVSG-CDAKMYPPMSTQL----EALGIDVYEGFDAAQLDE-----FKADVYV 71 (326)
T ss_dssp CCEEEEESC-CSHHHHHHHHHHH-HTTCEEEE-EESSCCTTHHHHH----HHTTCEEEESCCGGGGGS-----CCCSEEE
T ss_pred CcEEEEEEE-CHHHHHHHHHHHH-hCCCEEEE-EcCCCCcHHHHHH----HhCCCEEECCCCHHHcCC-----CCCCEEE
Confidence 579999998 999996 777555 57888764 7754211111222 23466665 34444430 2589888
Q ss_pred EcC-CchhHHHHHHHHHHcCCCEE
Q 022250 112 DFT-DASTVYDNVKQATAFGMRSV 134 (300)
Q Consensus 112 DfT-~p~~~~~~~~~al~~G~~vV 134 (300)
--. .|.. .+.+..|.++|+|++
T Consensus 72 ~Spgi~~~-~p~~~~a~~~gi~v~ 94 (326)
T 3eag_A 72 IGNVAKRG-MDVVEAILNLGLPYI 94 (326)
T ss_dssp ECTTCCTT-CHHHHHHHHTTCCEE
T ss_pred ECCCcCCC-CHHHHHHHHcCCcEE
Confidence 433 1322 333455666666655
No 370
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=94.09 E-value=0.2 Score=48.26 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=29.7
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcC--CcEEEEEEe
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKAR--GMEVAGAID 68 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~--~~eLvg~vd 68 (300)
.+++|.|.|++|.+|+.+++.+.+.+ +.++++...
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 46899999999999999999998765 688887654
No 371
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=94.05 E-value=0.24 Score=47.95 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=59.6
Q ss_pred cccccceeeEeecCCCC-----CcceEEEEcCCchHHHHHHHHHHh---cCC-cEEEEEEecCCC---Ccch--------
Q 022250 17 QNVKAKRFISCSTNPPQ-----SNIKVIINGAVKEIGRAAVIAVTK---ARG-MEVAGAIDSHSV---GEDI-------- 76 (300)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-----~~ikV~V~Ga~GrMG~~i~~~i~~---~~~-~eLvg~vd~~~~---g~d~-------- 76 (300)
.+.|..|.-.|-.+.++ .|.||.|.|+||-+|+...+.+.+ .|+ +++++....... .+.+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v 133 (488)
T 3au8_A 54 KSRRCKRIKLCKKDLIDIGAIKKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYL 133 (488)
T ss_dssp -----------------------CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEE
T ss_pred ccCceEEEEeccccchhhhhhhcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEE
Confidence 34455677777666632 256799999999999999999987 444 999998763210 0000
Q ss_pred --------hhhhcCcC---CCCcceec---CHHHHHhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEeC
Q 022250 77 --------GMVCDMEQ---PLEIPVMS---DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (300)
Q Consensus 77 --------~~~~g~~~---~~gv~v~~---dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVigT 137 (300)
.++-.... ..++.++. .+.++.. ..++|+|+-.-.-.+-..-...|+++|+.+-...
T Consensus 134 ~v~d~~~~~~L~~~l~~~~~~~~~v~~G~egl~e~a~----~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALAN 204 (488)
T 3au8_A 134 CIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEICS----SNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALAN 204 (488)
T ss_dssp EESCGGGTHHHHTGGGGSTTCCCEEEEHHHHHHHHHH----CTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEcCHHHHHHHHHHhhhhcCCCceEEeCHHHHHHHhc----CCCCCEEEEccccHhHHHHHHHHHHCCCcEEEec
Confidence 01100000 11222321 2223332 2457888866666666777778888888887763
No 372
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.04 E-value=0.46 Score=43.32 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=42.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcC-CcEEEEEEecCCCCcch-h-hhhcC----cCCCCcceecCHHHHHhcccccCCcc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDI-G-MVCDM----EQPLEIPVMSDLTMVLGSISQSKARA 108 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~-~-~~~g~----~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (300)
|||+|+|+ |.||..++..+.... +.+++ .+|.+..-.+. . ++... .....+..++|+++ + .++|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l------~~aD 71 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-T------ANSD 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-G------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-H------CCCC
Confidence 58999998 999999999887642 56765 46754310000 0 11100 01122444578876 5 4799
Q ss_pred EEEEcC
Q 022250 109 VVIDFT 114 (300)
Q Consensus 109 VVIDfT 114 (300)
+||...
T Consensus 72 vViiav 77 (310)
T 1guz_A 72 IVIITA 77 (310)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999776
No 373
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.00 E-value=0.19 Score=49.72 Aligned_cols=101 Identities=12% Similarity=0.086 Sum_probs=59.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcchh-----hhhcCcCCCCccee-c
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGEDIG-----MVCDMEQPLEIPVM-S 92 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~----------------~g~d~~-----~~~g~~~~~gv~v~-~ 92 (300)
..||.|+|+ |.+|..+++.+. ..++.=+.++|.+. .|+.-. .+..+.+...+..+ .
T Consensus 32 ~~~VlvvG~-GGlGseiak~La-~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~~ 109 (531)
T 1tt5_A 32 SAHVCLINA-TATGTEILKNLV-LPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 109 (531)
T ss_dssp HCEEEEECC-SHHHHHHHHHHH-TTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred cCeEEEECc-CHHHHHHHHHHH-HcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 368999998 999999999988 46775566777421 111100 01111111122222 3
Q ss_pred CHHHHHhcc-cccCCccEEEEcCCch-hHHHHHHHHHHcCCCEEEeC
Q 022250 93 DLTMVLGSI-SQSKARAVVIDFTDAS-TVYDNVKQATAFGMRSVVYV 137 (300)
Q Consensus 93 dl~~~l~~~-~~~~~~DVVIDfT~p~-~~~~~~~~al~~G~~vVigT 137 (300)
+++++++.. ..-.++|+|||++... +-......|.++++|+|.+-
T Consensus 110 ~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~ 156 (531)
T 1tt5_A 110 SPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICR 156 (531)
T ss_dssp CHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 444321100 0013689999998544 44566678999999999773
No 374
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.97 E-value=0.11 Score=50.13 Aligned_cols=135 Identities=14% Similarity=0.137 Sum_probs=81.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-----CCCCcchhhhhcCcCCCCc------------ceecCHHHHH
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGEDIGMVCDMEQPLEI------------PVMSDLTMVL 98 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-----~~~g~d~~~~~g~~~~~gv------------~v~~dl~~~l 98 (300)
.+|+|.|. |+||+..++.+.+ .+.++|++.|+ ++.|-|..++.-.....+. ..+.+.++++
T Consensus 211 k~vaVqG~-GnVG~~aa~~L~e-~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~ 288 (421)
T 1v9l_A 211 KTVAIQGM-GNVGRWTAYWLEK-MGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIF 288 (421)
T ss_dssp CEEEEECC-SHHHHHHHHHHHT-TTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGG
T ss_pred CEEEEECc-CHHHHHHHHHHHH-CCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhh
Confidence 78999997 9999999998774 69999999996 2344454443322122221 1121335666
Q ss_pred hcccccCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCcH---HHHHH
Q 022250 99 GSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---GSILL 172 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~Si---Gv~ll 172 (300)
. .++|+++-+..+... .+++. +-+..+|++-- .++++.. +.+ +++| +++.|-+.. ||..-
T Consensus 289 ~-----~~~Dil~P~A~~~~I~~~~a~---~l~ak~V~EgAN~p~t~~a~---~~l-~~~G--i~~~PD~~aNaGGV~~S 354 (421)
T 1v9l_A 289 K-----LDVDIFVPAAIENVIRGDNAG---LVKARLVVEGANGPTTPEAE---RIL-YERG--VVVVPDILANAGGVIMS 354 (421)
T ss_dssp G-----CCCSEEEECSCSSCBCTTTTT---TCCCSEEECCSSSCBCHHHH---HHH-HTTT--CEEECHHHHSTHHHHHH
T ss_pred c-----CCccEEEecCcCCccchhhHH---HcCceEEEecCCCcCCHHHH---HHH-HHCC--CEEeChHHhhCCCeeee
Confidence 5 689999988765544 33333 44899999865 4565432 223 3444 466665432 54431
Q ss_pred -HHHHHHhccCCCCe
Q 022250 173 -QQAAISASFHYKNV 186 (300)
Q Consensus 173 -~~~a~~~~~~~~di 186 (300)
.+..+.+..+.|+-
T Consensus 355 ~~E~~qn~~~~~w~~ 369 (421)
T 1v9l_A 355 YLEWVENLQWYIWDE 369 (421)
T ss_dssp HHHHHHHHTTCCCCH
T ss_pred HHHHHhhccccCCCH
Confidence 34556665556653
No 375
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.96 E-value=0.12 Score=52.95 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=26.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
+.||+|+|+ |.||..++..+.+ .+++++ ++|.+
T Consensus 312 ~~kV~VIGa-G~MG~~iA~~la~-aG~~V~-l~D~~ 344 (725)
T 2wtb_A 312 IKKVAIIGG-GLMGSGIATALIL-SNYPVI-LKEVN 344 (725)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHT-TTCCEE-EECSS
T ss_pred CcEEEEEcC-CHhhHHHHHHHHh-CCCEEE-EEECC
Confidence 568999998 9999999998874 578765 46653
No 376
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=93.94 E-value=0.13 Score=47.33 Aligned_cols=61 Identities=21% Similarity=0.199 Sum_probs=43.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -++++.+ +|+... .. . + .+.++++++. .+|+|+...
T Consensus 144 g~~vgIIG~-G~IG~~~A~~l~~-~G~~V~~-~d~~~~--~~--------~--~-~~~~l~ell~------~aDvV~l~~ 201 (311)
T 2cuk_A 144 GLTLGLVGM-GRIGQAVAKRALA-FGMRVVY-HARTPK--PL--------P--Y-PFLSLEELLK------EADVVSLHT 201 (311)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSCC--SS--------S--S-CBCCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEEE-CHHHHHHHHHHHH-CCCEEEE-ECCCCc--cc--------c--c-ccCCHHHHHh------hCCEEEEeC
Confidence 468999998 9999999998875 5788764 665431 10 1 1 2568889885 689999776
Q ss_pred Cch
Q 022250 115 DAS 117 (300)
Q Consensus 115 ~p~ 117 (300)
+..
T Consensus 202 p~~ 204 (311)
T 2cuk_A 202 PLT 204 (311)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 377
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=93.92 E-value=0.067 Score=49.34 Aligned_cols=89 Identities=13% Similarity=0.069 Sum_probs=57.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCc--ceecCHHHHHhcccccCCccEEEEc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVIDF 113 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVVIDf 113 (300)
.+|+|+|+ |.||+.+++.+......+-+-++|++ ..+...+... ..+|+ ... |+++++. ++|+||-+
T Consensus 122 ~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~--~~~g~~~~~~-~~~eav~------~aDIVi~a 190 (313)
T 3hdj_A 122 SVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIG--RRCGVPARMA-APADIAA------QADIVVTA 190 (313)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHH--HHHTSCEEEC-CHHHHHH------HCSEEEEC
T ss_pred cEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHH--HhcCCeEEEe-CHHHHHh------hCCEEEEc
Confidence 68999997 99999999998875456667788876 2222211110 11233 345 8999985 79999987
Q ss_pred CCchh-HHHHHHHHHHcCCCEE-EeC
Q 022250 114 TDAST-VYDNVKQATAFGMRSV-VYV 137 (300)
Q Consensus 114 T~p~~-~~~~~~~al~~G~~vV-igT 137 (300)
|+... +.. ...++.|.+++ +|+
T Consensus 191 T~s~~pvl~--~~~l~~G~~V~~vGs 214 (313)
T 3hdj_A 191 TRSTTPLFA--GQALRAGAFVGAIGS 214 (313)
T ss_dssp CCCSSCSSC--GGGCCTTCEEEECCC
T ss_pred cCCCCcccC--HHHcCCCcEEEECCC
Confidence 75421 111 23466787777 454
No 378
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.91 E-value=0.12 Score=48.54 Aligned_cols=109 Identities=15% Similarity=0.195 Sum_probs=66.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|.|+ |++|+.+++.+.+ -+++++ +.|.+. +..++. ..++.... +.++++. .++|+++-+.
T Consensus 175 GktV~I~G~-GnVG~~~A~~l~~-~GakVv-vsD~~~---~~~~~a---~~~ga~~v-~~~ell~-----~~~DIliP~A 239 (355)
T 1c1d_A 175 GLTVLVQGL-GAVGGSLASLAAE-AGAQLL-VADTDT---ERVAHA---VALGHTAV-ALEDVLS-----TPCDVFAPCA 239 (355)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH---HHHHHH---HHTTCEEC-CGGGGGG-----CCCSEEEECS
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEE-EEeCCc---cHHHHH---HhcCCEEe-ChHHhhc-----CccceecHhH
Confidence 378999998 9999999998775 589999 888642 111121 12333322 5667775 5889998655
Q ss_pred CchhH-HHHHHHHHHcCCCEEEeCCC--CCHHHHHHHHHHhhhCCCeEEEcCCCc
Q 022250 115 DASTV-YDNVKQATAFGMRSVVYVPH--IQLETVSALSAFCDKASMGCLIAPTLS 166 (300)
Q Consensus 115 ~p~~~-~~~~~~al~~G~~vVigTTG--~~~e~~~~L~~~a~~~~i~iv~a~N~S 166 (300)
..... .+++. ..+..+|+++.. .++++. . ++-++++ +++.|-+.
T Consensus 240 ~~~~I~~~~~~---~lk~~iVie~AN~p~t~~eA--~-~~L~~~g--Ilv~Pd~~ 286 (355)
T 1c1d_A 240 MGGVITTEVAR---TLDCSVVAGAANNVIADEAA--S-DILHARG--ILYAPDFV 286 (355)
T ss_dssp CSCCBCHHHHH---HCCCSEECCSCTTCBCSHHH--H-HHHHHTT--CEECCHHH
T ss_pred HHhhcCHHHHh---hCCCCEEEECCCCCCCCHHH--H-HHHHhCC--EEEECCeE
Confidence 44333 34443 346889999873 343332 2 3345544 56666543
No 379
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=93.90 E-value=0.15 Score=46.37 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=26.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCC-----cEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARG-----MEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~-----~eLvg~vd 68 (300)
+||.|.|++|.+|+.+++.+.+. + .++++...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~-g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA-DTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST-TCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-CCCCCceEEEEEeC
Confidence 68999999999999999998764 5 88877543
No 380
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.89 E-value=0.12 Score=48.00 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=25.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
-||+|+|+ |-||+.|+...+. .+++++ ++|.+
T Consensus 7 ~~VaViGa-G~MG~giA~~~a~-~G~~V~-l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGS-GLVGRSWAMLFAS-GGFRVK-LYDIE 38 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSC
T ss_pred CeEEEECC-cHHHHHHHHHHHh-CCCeEE-EEECC
Confidence 58999998 9999999998774 588765 57743
No 381
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=93.89 E-value=0.053 Score=50.10 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=42.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|+ |+||+.+++.+.. -++++++ +|+.. .....+. . .....+++++++ .+|+|+-..
T Consensus 139 g~tvGIiG~-G~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~~~~~----~--~~~~~~l~ell~------~aDiV~l~~ 201 (315)
T 3pp8_A 139 EFSVGIMGA-GVLGAKVAESLQA-WGFPLRC-WSRSR--KSWPGVE----S--YVGREELRAFLN------QTRVLINLL 201 (315)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHT-TTCCEEE-EESSC--CCCTTCE----E--EESHHHHHHHHH------TCSEEEECC
T ss_pred CCEEEEEee-CHHHHHHHHHHHH-CCCEEEE-EcCCc--hhhhhhh----h--hcccCCHHHHHh------hCCEEEEec
Confidence 478999998 9999999998874 5888776 56532 1111000 0 001257889985 789998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 202 P 202 (315)
T 3pp8_A 202 P 202 (315)
T ss_dssp C
T ss_pred C
Confidence 4
No 382
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=93.88 E-value=0.15 Score=45.02 Aligned_cols=74 Identities=22% Similarity=0.194 Sum_probs=49.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++.. +++. .... . ..+. +..|.+
T Consensus 29 k~vlVTGas~gIG~aia~~l~~-~G~~V~~~-~r~~--~~~~-------~-------------------~~~~~~~~Dv~ 78 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRD-RNYRVVAT-SRSI--KPSA-------D-------------------PDIHTVAGDIS 78 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHH-TTCEEEEE-ESSC--CCCS-------S-------------------TTEEEEESCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eCCh--hhcc-------c-------------------CceEEEEccCC
Confidence 4689999999999999999885 58887754 4332 0000 0 0111 345778
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-.-|
T Consensus 79 d~~~v~~~~~~~~~~~g~iD~lv~nAg 105 (260)
T 3un1_A 79 KPETADRIVREGIERFGRIDSLVNNAG 105 (260)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 888877777766655 7888887665
No 383
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=93.86 E-value=0.079 Score=49.34 Aligned_cols=63 Identities=16% Similarity=0.097 Sum_probs=43.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. ..... ..++. +.++++++. .+|+|+-..
T Consensus 141 g~tvgIiG~-G~IG~~vA~~l~~-~G~~V~~-~d~~~--~~~~~------~~g~~-~~~l~ell~------~aDvV~l~~ 202 (334)
T 2pi1_A 141 RLTLGVIGT-GRIGSRVAMYGLA-FGMKVLC-YDVVK--REDLK------EKGCV-YTSLDELLK------ESDVISLHV 202 (334)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSC--CHHHH------HTTCE-ECCHHHHHH------HCSEEEECC
T ss_pred CceEEEECc-CHHHHHHHHHHHH-CcCEEEE-ECCCc--chhhH------hcCce-ecCHHHHHh------hCCEEEEeC
Confidence 378999997 9999999998874 5888775 66543 11110 12333 346999985 789998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 203 P 203 (334)
T 2pi1_A 203 P 203 (334)
T ss_dssp C
T ss_pred C
Confidence 4
No 384
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.84 E-value=0.18 Score=47.15 Aligned_cols=62 Identities=23% Similarity=0.221 Sum_probs=43.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. .. .. ..++ .+.++++++. .+|+|+-..
T Consensus 148 gktvgIiGl-G~IG~~vA~~l~~-~G~~V~~-~d~~~--~~--~~-----~~~~-~~~~l~ell~------~aDvV~l~~ 208 (343)
T 2yq5_A 148 NLTVGLIGV-GHIGSAVAEIFSA-MGAKVIA-YDVAY--NP--EF-----EPFL-TYTDFDTVLK------EADIVSLHT 208 (343)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSC--CG--GG-----TTTC-EECCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEec-CHHHHHHHHHHhh-CCCEEEE-ECCCh--hh--hh-----hccc-cccCHHHHHh------cCCEEEEcC
Confidence 368999997 9999999998875 5888775 66543 11 11 1122 2448999985 789999665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 209 P 209 (343)
T 2yq5_A 209 P 209 (343)
T ss_dssp C
T ss_pred C
Confidence 4
No 385
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=93.84 E-value=0.34 Score=43.00 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=53.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc-cEEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-AVVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-DVVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+..++....+.. ....++. +++-+. .... -+..|.+
T Consensus 32 k~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 91 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLAL-EGAAVALTYVNAA--ERAQAVV--------------SEIEQA---GGRAVAIRADNR 91 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCCH--HHHHHHH--------------HHHHhc---CCcEEEEECCCC
Confidence 4699999999999999999885 5888765443321 1111110 111110 0111 2456888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++.+.+.+..+.+. ++.+|+=..|.
T Consensus 92 d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 92 DAEAIEQAIRETVEALGGLDILVNSAGI 119 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 888888877776665 78999876653
No 386
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=93.83 E-value=0.42 Score=41.92 Aligned_cols=85 Identities=18% Similarity=0.246 Sum_probs=53.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++...+++. ....+. .+++.+. ..+.. +..|.+
T Consensus 27 k~vlVTGas~gIG~~la~~l~~-~G~~v~i~~~r~~--~~~~~~--------------~~~l~~~---~~~~~~~~~Dl~ 86 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAA-DGFNIGVHYHRDA--AGAQET--------------LNAIVAN---GGNGRLLSFDVA 86 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH--------------HHHHHHT---TCCEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCch--HHHHHH--------------HHHHHhc---CCceEEEEecCC
Confidence 5799999999999999999885 5788766554331 111110 1122110 01222 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++.+|+-..|.
T Consensus 87 ~~~~~~~~~~~~~~~~g~id~li~nAg~ 114 (267)
T 4iiu_A 87 NREQCREVLEHEIAQHGAWYGVVSNAGI 114 (267)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCC
Confidence 888888777766554 68888876653
No 387
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.80 E-value=0.045 Score=49.70 Aligned_cols=68 Identities=13% Similarity=0.051 Sum_probs=41.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
.++.|+|+ |.||+.++..+.+ .++.-+-+++++. ..+..++ .......++++++++ .++|+||..|+
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~-~G~~~v~v~~R~~--~~a~~la---~~~~~~~~~~~~~~~------~~aDiVInaTp 184 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYK-IVRPTLTVANRTM--SRFNNWS---LNINKINLSHAESHL------DEFDIIINTTP 184 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHT-TCCSCCEEECSCG--GGGTTCC---SCCEEECHHHHHHTG------GGCSEEEECCC
T ss_pred CEEEEECC-cHHHHHHHHHHHH-CCCCEEEEEeCCH--HHHHHHH---HhcccccHhhHHHHh------cCCCEEEECcc
Confidence 58999998 9999999998875 4652234566543 2223332 112222244566655 36899997775
Q ss_pred c
Q 022250 116 A 116 (300)
Q Consensus 116 p 116 (300)
.
T Consensus 185 ~ 185 (277)
T 3don_A 185 A 185 (277)
T ss_dssp -
T ss_pred C
Confidence 3
No 388
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=93.80 E-value=0.36 Score=41.42 Aligned_cols=83 Identities=19% Similarity=0.210 Sum_probs=53.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecC---HHHHHhcccccCCccEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD---LTMVLGSISQSKARAVVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~d---l~~~l~~~~~~~~~DVVI 111 (300)
|.|+.|+|+ |..|+.+++.+.+ .++++++.+|.+.. ... -.|+|++.. ++++.. ...|-++
T Consensus 12 ~k~v~IiGA-Gg~g~~v~~~l~~-~~~~~vgfiDd~~~---~~~------~~g~~Vlg~~~~~~~~~~-----~~~~~v~ 75 (220)
T 4ea9_A 12 IGGVVIIGG-GGHAKVVIESLRA-CGETVAAIVDADPT---RRA------VLGVPVVGDDLALPMLRE-----QGLSRLF 75 (220)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHH-TTCCEEEEECSCC------C------BTTBCEEESGGGHHHHHH-----TTCCEEE
T ss_pred CCCEEEEcC-CHHHHHHHHHHHh-CCCEEEEEEeCCcc---cCc------CCCeeEECCHHHHHHhhc-----ccccEEE
Confidence 468999998 9999999998876 78999999996531 111 246677643 444443 2344333
Q ss_pred Ec-CCchhHHHHHHHHHHcCCCE
Q 022250 112 DF-TDASTVYDNVKQATAFGMRS 133 (300)
Q Consensus 112 Df-T~p~~~~~~~~~al~~G~~v 133 (300)
-. ..+..-.+..+.+.+.|..+
T Consensus 76 iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 76 VAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCEE
T ss_pred EecCCHHHHHHHHHHHHhcCCCc
Confidence 22 23444466667777777543
No 389
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.78 E-value=0.19 Score=43.35 Aligned_cols=119 Identities=10% Similarity=0.072 Sum_probs=66.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce-e---cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVV 110 (300)
..+|.|+|+ |++|+.+++.+.+ .+. +-++|++. ..+..+. .++.+ + ++.+.+.+. .-.++|+|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~-~g~--v~vid~~~--~~~~~~~-----~~~~~i~gd~~~~~~l~~a--~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRG-SEV--FVLAEDEN--VRKKVLR-----SGANFVHGDPTRVSDLEKA--NVRGARAV 75 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTT-SEE--EEEESCGG--GHHHHHH-----TTCEEEESCTTCHHHHHHT--TCTTCSEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHh-CCe--EEEEECCH--HHHHHHh-----cCCeEEEcCCCCHHHHHhc--CcchhcEE
Confidence 468999998 9999999998764 355 44667542 1122111 22322 1 233322110 01478999
Q ss_pred EEcCCchhH-HHHHHHHHHcCCC--EEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHH
Q 022250 111 IDFTDASTV-YDNVKQATAFGMR--SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (300)
Q Consensus 111 IDfT~p~~~-~~~~~~al~~G~~--vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll 172 (300)
|-.+..+.. ...+..+.+.+.+ +|.-. .+++..+.+. +.|+-.++.|....+-.+.
T Consensus 76 i~~~~~d~~n~~~~~~a~~~~~~~~iia~~--~~~~~~~~l~----~~G~~~vi~p~~~~a~~l~ 134 (234)
T 2aef_A 76 IVDLESDSETIHCILGIRKIDESVRIIAEA--ERYENIEQLR----MAGADQVISPFVISGRLMS 134 (234)
T ss_dssp EECCSCHHHHHHHHHHHHHHCSSSEEEEEC--SSGGGHHHHH----HHTCSEEECHHHHHHHHHH
T ss_pred EEcCCCcHHHHHHHHHHHHHCCCCeEEEEE--CCHhHHHHHH----HCCCCEEECHHHHHHHHHH
Confidence 877665543 4444566666654 44322 3333434444 3456678888777776654
No 390
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.71 E-value=0.11 Score=47.27 Aligned_cols=122 Identities=14% Similarity=0.075 Sum_probs=64.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.-++.|+|+ |++|+.++..+.+ .+..=+-+++++. ..+.+++ ...+.. +++++-+ .++|+||..|
T Consensus 122 ~k~vlvlGa-GGaaraia~~L~~-~G~~~v~v~nRt~--~ka~~La---~~~~~~---~~~~l~~-----l~~DivInaT 186 (282)
T 3fbt_A 122 NNICVVLGS-GGAARAVLQYLKD-NFAKDIYVVTRNP--EKTSEIY---GEFKVI---SYDELSN-----LKGDVIINCT 186 (282)
T ss_dssp TSEEEEECS-STTHHHHHHHHHH-TTCSEEEEEESCH--HHHHHHC---TTSEEE---EHHHHTT-----CCCSEEEECS
T ss_pred CCEEEEECC-cHHHHHHHHHHHH-cCCCEEEEEeCCH--HHHHHHH---HhcCcc---cHHHHHh-----ccCCEEEECC
Confidence 368999998 9999999998875 4663344566643 2333443 222211 2333321 1689999888
Q ss_pred CchhH-----HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh
Q 022250 115 DASTV-----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (300)
Q Consensus 115 ~p~~~-----~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~ 179 (300)
+.-.. ...-...+..+ .+|+- .-+++.+ -.|.+.|++.|..++= .+++ |+.|++.++
T Consensus 187 p~Gm~~~~~~~pi~~~~l~~~-~~v~D-lvY~P~~-T~ll~~A~~~G~~~~~----Gl~M-Lv~Qa~~~f 248 (282)
T 3fbt_A 187 PKGMYPKEGESPVDKEVVAKF-SSAVD-LIYNPVE-TLFLKYARESGVKAVN----GLYM-LVSQAAASE 248 (282)
T ss_dssp STTSTTSTTCCSSCHHHHTTC-SEEEE-SCCSSSS-CHHHHHHHHTTCEEEC----SHHH-HHHHHHHHH
T ss_pred ccCccCCCccCCCCHHHcCCC-CEEEE-EeeCCCC-CHHHHHHHHCcCeEeC----cHHH-HHHHHHHHH
Confidence 53110 01112334433 44433 2223222 2366677787877552 4554 445555444
No 391
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=93.71 E-value=0.18 Score=47.62 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=27.7
Q ss_pred CCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
.||.++.||+|+|. |..|+.+++++.+ -+++++.+-
T Consensus 19 ~~mm~~~~I~ilGg-G~lg~~l~~aa~~-lG~~v~~~d 54 (403)
T 3k5i_A 19 GHMWNSRKVGVLGG-GQLGRMLVESANR-LNIQVNVLD 54 (403)
T ss_dssp --CCSCCEEEEECC-SHHHHHHHHHHHH-HTCEEEEEE
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHHH-CCCEEEEEE
Confidence 45444689999997 9999999998875 588887654
No 392
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.71 E-value=0.053 Score=50.12 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=44.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc------EEEEEEecC----C---CCcchhhhhcC--cCCCCcceecCHHHHHh
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSH----S---VGEDIGMVCDM--EQPLEIPVMSDLTMVLG 99 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~------eLvg~vd~~----~---~g~d~~~~~g~--~~~~gv~v~~dl~~~l~ 99 (300)
++||+|+|++|.+|+.++..+....-+ +|+. +|.+ . .| .+.++... .....+..++++.+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l-~Di~~~~~~~~~~g-~~~dl~~~~~~~~~~i~~~~~~~~al- 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQL-LEIPNEKAQKALQG-VMMEIDDCAFPLLAGMTAHADPMTAF- 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEE-ECCSCHHHHHHHHH-HHHHHHTTTCTTEEEEEEESSHHHHT-
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEE-EcCCCccccccchh-hHHHHhhhcccccCcEEEecCcHHHh-
Confidence 489999998899999999988764322 6665 7754 1 01 01112210 0011344457888887
Q ss_pred cccccCCccEEEEcC
Q 022250 100 SISQSKARAVVIDFT 114 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT 114 (300)
.++|+||...
T Consensus 82 -----~~aD~Vi~~a 91 (329)
T 1b8p_A 82 -----KDADVALLVG 91 (329)
T ss_dssp -----TTCSEEEECC
T ss_pred -----CCCCEEEEeC
Confidence 4789988653
No 393
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=93.71 E-value=0.14 Score=45.60 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=25.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhc-CCcEEEEEE
Q 022250 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAI 67 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~v 67 (300)
||.|.|++|.+|+.+++.+.+. .+.++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 32 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASD 32 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 6899999999999999998875 367777643
No 394
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=93.71 E-value=0.26 Score=45.32 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=27.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
|.+|.|.|++|.+|+.+++.+.+ .+.+++++..
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~-~g~~V~~~~r 60 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLG-KGYEVHGLIR 60 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCeEEEEcCCchHHHHHHHHHHH-CCCEEEEEec
Confidence 36899999999999999999886 4788887543
No 395
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=93.69 E-value=0.15 Score=49.01 Aligned_cols=136 Identities=16% Similarity=0.194 Sum_probs=83.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCcCCCC-c---c-eecCHHHHHhccccc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I---P-VMSDLTMVLGSISQS 104 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~~~~~g~~~~~g-v---~-v~~dl~~~l~~~~~~ 104 (300)
..+|+|.|+ |++|+..++.+.+ .+.++|++.|++ +.|-|...+.....+.+ + + .+-+.++++.
T Consensus 221 g~~vaVqG~-GnVG~~aa~~l~e-~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~----- 293 (424)
T 3k92_A 221 NARIIIQGF-GNAGSFLAKFMHD-AGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLE----- 293 (424)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHH-HTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHH-----
T ss_pred cCEEEEECC-CHHHHHHHHHHHH-CCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCcccee-----
Confidence 378999997 9999999998775 589999999953 44666554432222222 1 1 1124577776
Q ss_pred CCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC-C-CCHHHHHHHHHHhhhCCCeEEEcCCCcH---HHHH-HHHHHH
Q 022250 105 KARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP-H-IQLETVSALSAFCDKASMGCLIAPTLSI---GSIL-LQQAAI 177 (300)
Q Consensus 105 ~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT-G-~~~e~~~~L~~~a~~~~i~iv~a~N~Si---Gv~l-l~~~a~ 177 (300)
.++||+|-++..... .+++. +-+..+|++-- + .+++..+. -+++| +++.|-+.. ||.. -.+.++
T Consensus 294 ~~~DIliPcA~~n~I~~~~a~---~l~ak~V~EgAN~p~t~eA~~i----L~~rG--I~~~PD~~aNAGGV~vS~~E~~q 364 (424)
T 3k92_A 294 KDCDILVPAAISNQITAKNAH---NIQASIVVERANGPTTIDATKI----LNERG--VLLVPDILASAGGVTVSYFEWVQ 364 (424)
T ss_dssp SCCSEEEECSCSSCBCTTTGG---GCCCSEEECCSSSCBCHHHHHH----HHHTT--CEEECHHHHTTHHHHHHHHHHHH
T ss_pred ccccEEeecCcccccChhhHh---hcCceEEEcCCCCCCCHHHHHH----HHHCC--CEEECchHhcCCCEEeehhHHHh
Confidence 689999988754433 33443 33889998865 3 45543222 34444 577787654 3322 134455
Q ss_pred HhccCCCCe
Q 022250 178 SASFHYKNV 186 (300)
Q Consensus 178 ~~~~~~~di 186 (300)
.+..++|+.
T Consensus 365 n~~~~~w~~ 373 (424)
T 3k92_A 365 NNQGYYWSE 373 (424)
T ss_dssp HHHTCCCCH
T ss_pred cccccCCCH
Confidence 555555653
No 396
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=93.68 E-value=0.16 Score=48.85 Aligned_cols=136 Identities=18% Similarity=0.243 Sum_probs=80.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-----CCCCcchhhhhcCcCCCC-cce-ecCHHHHHhcccccCCc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGEDIGMVCDMEQPLE-IPV-MSDLTMVLGSISQSKAR 107 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-----~~~g~d~~~~~g~~~~~g-v~v-~~dl~~~l~~~~~~~~~ 107 (300)
..+|+|.|. |++|+..++.+.+ .+..+|++.|+ ++.|-|...+.......+ +.- .-+-++++. .++
T Consensus 218 gk~vaVqG~-GnVG~~~a~~L~~-~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~-----~~~ 290 (419)
T 3aoe_E 218 GARVVVQGL-GQVGAAVALHAER-LGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFG-----LEA 290 (419)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGG-----SSC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhc-----cCc
Confidence 378999997 9999999998875 69999999996 334545443321100111 110 012245554 689
Q ss_pred cEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCcH---HHHHH-HHHHHHhc
Q 022250 108 AVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---GSILL-QQAAISAS 180 (300)
Q Consensus 108 DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~Si---Gv~ll-~~~a~~~~ 180 (300)
||++-++.+... .+++. +.+..+|++-- .++++..+. +. ++| +++.|-+.. ||..- .+..+.+.
T Consensus 291 DVliP~A~~n~i~~~~A~---~l~ak~V~EgAN~p~t~~A~~~---L~-~~G--i~~~PD~~aNaGGV~~S~~E~~qn~~ 361 (419)
T 3aoe_E 291 EVLVLAAREGALDGDRAR---QVQAQAVVEVANFGLNPEAEAY---LL-GKG--ALVVPDLLSGGGGLLASYLEWVQDLN 361 (419)
T ss_dssp SEEEECSCTTCBCHHHHT---TCCCSEEEECSTTCBCHHHHHH---HH-HHT--CEEECHHHHTCHHHHHHHHHHHHHHH
T ss_pred eEEEecccccccccchHh---hCCceEEEECCCCcCCHHHHHH---HH-HCC--CEEECHHHHhCCCchhhHHHHhhccc
Confidence 999999876655 44443 45899999865 355543322 23 334 466665442 44331 34565665
Q ss_pred cCCCCe
Q 022250 181 FHYKNV 186 (300)
Q Consensus 181 ~~~~di 186 (300)
.+.|+-
T Consensus 362 ~~~w~~ 367 (419)
T 3aoe_E 362 MFFWSP 367 (419)
T ss_dssp TCCCCH
T ss_pred ccCCCH
Confidence 556654
No 397
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=93.66 E-value=0.19 Score=48.26 Aligned_cols=62 Identities=21% Similarity=0.109 Sum_probs=44.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+.. -++++++ +|+.. .. ...+.....+++++++ .+|+|+-..
T Consensus 156 gktvGIIGl-G~IG~~vA~~l~~-~G~~V~~-yd~~~--~~--------~~~~~~~~~sl~ell~------~aDvV~lhv 216 (416)
T 3k5p_A 156 GKTLGIVGY-GNIGSQVGNLAES-LGMTVRY-YDTSD--KL--------QYGNVKPAASLDELLK------TSDVVSLHV 216 (416)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECTTC--CC--------CBTTBEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEee-CHHHHHHHHHHHH-CCCEEEE-ECCcc--hh--------cccCcEecCCHHHHHh------hCCEEEEeC
Confidence 368999997 9999999998775 5888775 67542 10 0112334578999995 789998655
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 217 P 217 (416)
T 3k5p_A 217 P 217 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 398
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.59 E-value=0.19 Score=48.74 Aligned_cols=138 Identities=12% Similarity=0.170 Sum_probs=81.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-----CCCCc----chhhhhcCcCC--C---------CcceecCH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGE----DIGMVCDMEQP--L---------EIPVMSDL 94 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-----~~~g~----d~~~~~g~~~~--~---------gv~v~~dl 94 (300)
..+|+|.|. |+||+..++.+.+ .+.++|++.|+ ++.|- |+..+...... . +.+..+ .
T Consensus 230 g~~v~VqG~-GnVG~~~a~~L~~-~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~-~ 306 (449)
T 1bgv_A 230 GKTVALAGF-GNVAWGAAKKLAE-LGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFP-G 306 (449)
T ss_dssp TCEEEECCS-SHHHHHHHHHHHH-HTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEE-T
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-CCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeC-c
Confidence 378999997 9999999988764 58999999994 23343 22222110000 0 111111 1
Q ss_pred HHHHhcccccCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC--CCCHHHHHHHHHHhhhCCCeEEEcCCCc---HH
Q 022250 95 TMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLS---IG 168 (300)
Q Consensus 95 ~~~l~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT--G~~~e~~~~L~~~a~~~~i~iv~a~N~S---iG 168 (300)
++++. .++|+++-+..+... .+++.....+|+.+|++-- .++++.. +.+.++.|+ ++.|-+. =|
T Consensus 307 ~e~~~-----~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~---~~l~~~~Gi--~~~PD~~aNaGG 376 (449)
T 1bgv_A 307 EKPWG-----QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL---RFLMQQPNM--VVAPSKAVNAGG 376 (449)
T ss_dssp CCGGG-----SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH---HHHHHCTTC--EEECHHHHTTHH
T ss_pred hhhhc-----CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH---HHHHHcCCE--EEEChHHhcCCC
Confidence 23453 689999988766554 7888888889999999865 4666543 333333155 5555443 25
Q ss_pred HHHH-HHHHHHhccCCCC
Q 022250 169 SILL-QQAAISASFHYKN 185 (300)
Q Consensus 169 v~ll-~~~a~~~~~~~~d 185 (300)
|..- .+..+.+....|+
T Consensus 377 V~~S~~E~~qn~~~~~w~ 394 (449)
T 1bgv_A 377 VLVSGFEMSQNSERLSWT 394 (449)
T ss_dssp HHHHHHHHHHHHHTSCCC
T ss_pred ceeehhhhhccccccccc
Confidence 5432 2333333344454
No 399
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.51 E-value=0.096 Score=49.02 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=43.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecCC---CC--cchhhhhcCcCCCCcceecCHHHHHhcccccCCcc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHS---VG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA 108 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~---~g--~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (300)
++||+|+|++|.+|+.++..+....- -||+ .+|... .| .|..... . ....+..++|+.+.+ .++|
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evv-LiDi~~~k~~g~a~DL~~~~-~-~~~~i~~t~d~~~al------~dAD 78 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLC-LYDPFAVGLEGVAEEIRHCG-F-EGLNLTFTSDIKEAL------TDAK 78 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEE-EECSCHHHHHHHHHHHHHHC-C-TTCCCEEESCHHHHH------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEE-EEeCCchhHHHHHHhhhhCc-C-CCCceEEcCCHHHHh------CCCC
Confidence 58999999779999999987765432 2544 577531 11 1111111 1 112445567888877 4899
Q ss_pred EEEEc
Q 022250 109 VVIDF 113 (300)
Q Consensus 109 VVIDf 113 (300)
+||..
T Consensus 79 vVvit 83 (343)
T 3fi9_A 79 YIVSS 83 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99865
No 400
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.50 E-value=0.091 Score=53.82 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=26.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
..||+|+|+ |.||..++..+.+ .+++++ ++|.+
T Consensus 314 i~kV~VIGa-G~MG~~iA~~la~-aG~~V~-l~D~~ 346 (715)
T 1wdk_A 314 VKQAAVLGA-GIMGGGIAYQSAS-KGTPIL-MKDIN 346 (715)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHH-TTCCEE-EECSS
T ss_pred CCEEEEECC-ChhhHHHHHHHHh-CCCEEE-EEECC
Confidence 468999998 9999999998875 577766 46754
No 401
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.44 E-value=0.37 Score=44.76 Aligned_cols=32 Identities=9% Similarity=0.172 Sum_probs=26.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
-+|.|+|++|.+|...++.+. ..+.++++..+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~-~~Ga~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLR-LSGYIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeC
Confidence 469999999999999999776 46889888753
No 402
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=93.44 E-value=0.073 Score=51.26 Aligned_cols=136 Identities=12% Similarity=0.128 Sum_probs=71.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC----------CCCcchhhhhcCcCCCC-ccee-----cCHHHHH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH----------SVGEDIGMVCDMEQPLE-IPVM-----SDLTMVL 98 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~----------~~g~d~~~~~g~~~~~g-v~v~-----~dl~~~l 98 (300)
..||+|.|. |++|+..++.+.+ .+..+|++.|+. +.|-|..++.-.....+ +.-| -+.++++
T Consensus 212 g~~vaVqG~-GnVG~~~a~~L~~-~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~~ 289 (421)
T 2yfq_A 212 DAKIAVQGF-GNVGTFTVKNIER-QGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEFW 289 (421)
T ss_dssp GSCEEEECC-SHHHHHHHHHHHH-TTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccchh
Confidence 378999997 9999999998875 689999998865 22434332221100000 1001 1224555
Q ss_pred hcccccCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC-C-CCHHHHHHHHHHhhhCCCeEEEcCCCc---HHHHHH
Q 022250 99 GSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP-H-IQLETVSALSAFCDKASMGCLIAPTLS---IGSILL 172 (300)
Q Consensus 99 ~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT-G-~~~e~~~~L~~~a~~~~i~iv~a~N~S---iGv~ll 172 (300)
. .++||+|.++.+... .+++. +.+..+|++.- + ++++..+.|. ++|+ ++.|-+. =||.+-
T Consensus 290 ~-----~~~DIliP~A~~n~i~~~~A~---~l~ak~VvEgAN~P~t~ea~~il~----~~GI--~~~Pd~~aNaGGV~vS 355 (421)
T 2yfq_A 290 T-----KEYDIIVPAALENVITGERAK---TINAKLVCEAANGPTTPEGDKVLT----ERGI--NLTPDILTNSGGVLVS 355 (421)
T ss_dssp ----------CEEECSCSSCSCHHHHT---TCCCSEEECCSSSCSCHHHHHHHH----HHTC--EEECHHHHTTHHHHHH
T ss_pred c-----CCccEEEEcCCcCcCCcccHH---HcCCeEEEeCCccccCHHHHHHHH----HCCC--EEEChHHHhCCCeEEE
Confidence 4 589999999876554 44444 44888888765 3 5554333332 4444 5555443 254432
Q ss_pred -HHHHHHhccCCCCe
Q 022250 173 -QQAAISASFHYKNV 186 (300)
Q Consensus 173 -~~~a~~~~~~~~di 186 (300)
.+..+....++|+-
T Consensus 356 ~~E~~qN~~~~~w~~ 370 (421)
T 2yfq_A 356 YYEWVQNQYGYYWTE 370 (421)
T ss_dssp HHHHHHHHHTCCCCH
T ss_pred EEEEEecCccCcCCH
Confidence 34455555556653
No 403
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.42 E-value=0.68 Score=41.14 Aligned_cols=85 Identities=20% Similarity=0.203 Sum_probs=52.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
..+.|.|++|.+|+.+++.+.+ .+.+++....++. ....++. +++-.. ...+. +..|.+
T Consensus 30 k~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~--~~~~~~~--------------~~~~~~---~~~~~~~~~Dv~ 89 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAA-SGFDIAITGIGDA--EGVAPVI--------------AELSGL---GARVIFLRADLA 89 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEecCCCHHHHHHHHHHHH-CCCeEEEEeCCCH--HHHHHHH--------------HHHHhc---CCcEEEEEecCC
Confidence 4589999999999999999885 5788765432221 1111110 111110 01222 345889
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 90 d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 90 DLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp SGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 999888888777665 78999877665
No 404
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.42 E-value=0.16 Score=46.68 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=25.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~ 70 (300)
++||+|+|+ |.||..++..+....- -+|+ .+|.+
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~-l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIV-LIDAN 40 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 589999998 9999999988875432 2554 47754
No 405
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.40 E-value=0.17 Score=45.45 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=27.9
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
.++|.|.|++|.+|+.+++.+.+ .+.++++...
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLE-HGYKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHH-CCCEEEEEeC
Confidence 47899999999999999999886 4788887553
No 406
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=93.38 E-value=0.5 Score=40.35 Aligned_cols=85 Identities=24% Similarity=0.294 Sum_probs=52.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc-c-EEEEc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-A-VVIDF 113 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-D-VVIDf 113 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++...+++. ....++. +++-.. ..+. . +..|.
T Consensus 2 k~vlITGasggiG~~~a~~l~~-~G~~v~~~~~r~~--~~~~~~~--------------~~~~~~---~~~~~~~~~~D~ 61 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAE-DGFALAIHYGQNR--EKAEEVA--------------EEARRR---GSPLVAVLGANL 61 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHT-TTCEEEEEESSCH--HHHHHHH--------------HHHHHT---TCSCEEEEECCT
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCH--HHHHHHH--------------HHHHhc---CCceEEEEeccC
Confidence 4799999999999999999885 5788887655432 1111110 111100 0111 1 34478
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
+.++...+.+..+.+. ++.+|+=..|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~d~li~~Ag~ 90 (245)
T 2ph3_A 62 LEAEAATALVHQAAEVLGGLDTLVNNAGI 90 (245)
T ss_dssp TSHHHHHHHHHHHHHHHTCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 8888777766665543 68888876653
No 407
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=93.33 E-value=0.28 Score=43.64 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=25.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (300)
|||.|.|++|.+|+.+++.+.+ .+.++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~ 30 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLA-RGLEVAVL 30 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 4899999999999999999885 57888764
No 408
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=93.32 E-value=0.34 Score=43.68 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=27.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+.+|.|.|++|.+|+.+++.+.+ .+.++++.+.
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~-~G~~V~~~~r 37 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLE-RGYTVRATVR 37 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEC
Confidence 47899999999999999999875 5788887654
No 409
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.30 E-value=0.13 Score=47.69 Aligned_cols=71 Identities=18% Similarity=0.119 Sum_probs=41.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCC---CCcchhhhhcCcC-CCCcceecCHHHHHhcccccCCccE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHS---VGEDIGMVCDMEQ-PLEIPVMSDLTMVLGSISQSKARAV 109 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~---~g~d~~~~~g~~~-~~gv~v~~dl~~~l~~~~~~~~~DV 109 (300)
++||+|+|+ |.||..++..+...+-+ +|+ .+|... .|. +-++..... ..++.++++..+.+ .++|+
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~-l~D~~~~k~~g~-a~DL~~~~~~~~~~~i~~~~~~a~------~~aDi 79 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIG-IVDIFKDKTKGD-AIDLEDALPFTSPKKIYSAEYSDA------KDADL 79 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSCHHHHHHH-HHHHHTTGGGSCCCEEEECCGGGG------TTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEeCChHHHHHH-HhhHhhhhhhcCCcEEEECcHHHh------cCCCE
Confidence 589999998 99999999988765443 544 577532 111 011111100 01445554434445 47999
Q ss_pred EEEcC
Q 022250 110 VIDFT 114 (300)
Q Consensus 110 VIDfT 114 (300)
||...
T Consensus 80 Vvi~a 84 (326)
T 3vku_A 80 VVITA 84 (326)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 88654
No 410
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=93.26 E-value=0.29 Score=43.61 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=27.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
+++|.|.|++|.+|+.+++.+.+ .+.+++++.
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 43 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTE-QNVEVFGTS 43 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHH-CCCEEEEEe
Confidence 58899999999999999999886 478888744
No 411
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=93.24 E-value=0.13 Score=47.67 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=44.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|. |+||+.+++.+. .-++++++ +|+... +.... ...|+. +.+++++++ .+|+|+-..
T Consensus 145 g~tvGIIG~-G~IG~~vA~~l~-~~G~~V~~-~d~~~~--~~~~~----~~~g~~-~~~l~ell~------~aDvV~l~~ 208 (330)
T 4e5n_A 145 NATVGFLGM-GAIGLAMADRLQ-GWGATLQY-HEAKAL--DTQTE----QRLGLR-QVACSELFA------SSDFILLAL 208 (330)
T ss_dssp TCEEEEECC-SHHHHHHHHHTT-TSCCEEEE-ECSSCC--CHHHH----HHHTEE-ECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEee-CHHHHHHHHHHH-HCCCEEEE-ECCCCC--cHhHH----HhcCce-eCCHHHHHh------hCCEEEEcC
Confidence 478999997 999999999876 45888764 676431 11111 122333 358999985 689998665
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 209 P 209 (330)
T 4e5n_A 209 P 209 (330)
T ss_dssp C
T ss_pred C
Confidence 4
No 412
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=93.21 E-value=0.27 Score=44.80 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=27.0
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
|++|.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLE-KGYEVHGIK 32 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEE
Confidence 46899999999999999999886 478877653
No 413
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.16 E-value=0.1 Score=43.68 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=24.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (300)
-+|.|+|++|.+|+.+++.+.. .+.++++.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~ 69 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKM-IGARIYTT 69 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-HTCEEEEE
T ss_pred CEEEEeeCCChHHHHHHHHHHH-cCCEEEEE
Confidence 5799999889999999998774 46777653
No 414
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=93.15 E-value=0.92 Score=40.11 Aligned_cols=83 Identities=13% Similarity=0.121 Sum_probs=51.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++-+. ..++. +..|.+
T Consensus 45 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dl~ 103 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAK-SVSHVIC-ISRTQ--KSCDSVV--------------DEIKSF---GYESSGYAGDVS 103 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-TSSEEEE-EESSH--HHHHHHH--------------HHHHTT---TCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-cCCEEEE-EcCCH--HHHHHHH--------------HHHHhc---CCceeEEECCCC
Confidence 5799999999999999999875 5788876 55431 1111110 111100 01222 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++.+|+-..|
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag 130 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAG 130 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 888877777665543 5888887665
No 415
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=93.15 E-value=0.25 Score=43.69 Aligned_cols=56 Identities=25% Similarity=0.231 Sum_probs=25.2
Q ss_pred eccccCcccccccceeeEeecCCCCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEE
Q 022250 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAG 65 (300)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg 65 (300)
|-+.+|+.++-++.+-..+..-..-...++.|.|++|.+|+.+++.+.+ .+.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~-~G~~V~~ 57 (266)
T 3uxy_A 2 HHHHHHSSGVDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRA-AGARVAV 57 (266)
T ss_dssp ------------------------CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEE
T ss_pred CccccCCCCCCCCCCCcchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEE
Confidence 5566677776665554443321111135689999999999999999885 5777664
No 416
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=93.14 E-value=0.07 Score=48.18 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=64.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
.+|.|+|+ |+||+.++..+.+. +..=+-+++++. ..+..++ ..++....++++ + .++|+||..|+
T Consensus 120 ~~vlvlGa-Ggaarav~~~L~~~-G~~~i~v~nRt~--~ka~~la---~~~~~~~~~~~~--~------~~~DivInaTp 184 (271)
T 1npy_A 120 AKVIVHGS-GGMAKAVVAAFKNS-GFEKLKIYARNV--KTGQYLA---ALYGYAYINSLE--N------QQADILVNVTS 184 (271)
T ss_dssp SCEEEECS-STTHHHHHHHHHHT-TCCCEEEECSCH--HHHHHHH---HHHTCEEESCCT--T------CCCSEEEECSS
T ss_pred CEEEEECC-cHHHHHHHHHHHHC-CCCEEEEEeCCH--HHHHHHH---HHcCCccchhhh--c------ccCCEEEECCC
Confidence 57999998 99999999988754 553344666642 2233333 112222222222 2 36899998886
Q ss_pred chhH-------HHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh
Q 022250 116 ASTV-------YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (300)
Q Consensus 116 p~~~-------~~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~ 179 (300)
.... ...-..++..+.-++ -.. +++.+- .|.+.|++.|..++= .+++ |+.|.+.++
T Consensus 185 ~gm~~~~~~~~~~~~~~~l~~~~~v~-Dlv-Y~P~~T-~ll~~A~~~G~~~i~----Gl~M-Lv~Qa~~~f 247 (271)
T 1npy_A 185 IGMKGGKEEMDLAFPKAFIDNASVAF-DVV-AMPVET-PFIRYAQARGKQTIS----GAAV-IVLQAVEQF 247 (271)
T ss_dssp TTCTTSTTTTSCSSCHHHHHHCSEEE-ECC-CSSSSC-HHHHHHHHTTCEEEC----HHHH-HHHHHHHHH
T ss_pred CCccCccccCCCCCCHHHcCCCCEEE-Eee-cCCCCC-HHHHHHHHCCCEEEC----CHHH-HHHHHHHHH
Confidence 3321 111123455554333 221 222222 466777888877542 3343 445555444
No 417
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.13 E-value=0.75 Score=40.40 Aligned_cols=85 Identities=20% Similarity=0.249 Sum_probs=52.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++.....+. +..+ .+.+.+.+. ...+. +..|.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~-~G~~V~~~~r~~~---~~~~--------------~~~~~~~~~--~~~~~~~~~D~~ 89 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLAS-MGLKVWINYRSNA---EVAD--------------ALKNELEEK--GYKAAVIKFDAA 89 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCH---HHHH--------------HHHHHHHHT--TCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCCH---HHHH--------------HHHHHHHhc--CCceEEEECCCC
Confidence 5799999999999999999885 5788775443221 1110 011111100 01222 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++.+|+-..|.
T Consensus 90 ~~~~v~~~~~~~~~~~g~id~li~nAg~ 117 (271)
T 4iin_A 90 SESDFIEAIQTIVQSDGGLSYLVNNAGV 117 (271)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 888888777766654 78898876653
No 418
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.08 E-value=1 Score=41.66 Aligned_cols=88 Identities=19% Similarity=0.299 Sum_probs=53.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc---EEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VVID 112 (300)
..|.|.|++|.+|+++++.+.+ .+.+++.+ +++. .....+ ...++++.+++. ..... +..|
T Consensus 46 k~vlVTGas~GIG~aia~~La~-~Ga~Vvl~-~r~~--~~~~~l-----------~~~l~~~~~~~~-~~g~~~~~~~~D 109 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAK-DGANIVIA-AKTA--QPHPKL-----------LGTIYTAAEEIE-AVGGKALPCIVD 109 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEE-ESCC--SCCSSS-----------CCCHHHHHHHHH-HTTCEEEEEECC
T ss_pred CEEEEeCCChHHHHHHHHHHHH-CCCEEEEE-ECCh--hhhhhh-----------HHHHHHHHHHHH-hcCCeEEEEEcc
Confidence 3689999999999999999885 57887654 4332 110000 011112111000 01222 3468
Q ss_pred cCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.+.++.+.+.+..+.+. ++++||=..|
T Consensus 110 v~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 110 VRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 89999888888877765 8999987655
No 419
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=93.06 E-value=0.33 Score=43.53 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=26.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
++|.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~ 34 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLE-KGYEVYGAD 34 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEE
Confidence 6899999999999999999886 478887653
No 420
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=93.04 E-value=0.27 Score=43.89 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=51.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +.+. ..+. +..|.|
T Consensus 30 k~vlVTGas~gIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~---------------~~~~-----~~~~~~~~Dv~ 85 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLAD-EGCHVLC-ADIDG--DAADAAA---------------TKIG-----CGAAACRVDVS 85 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHHH---------------HHHC-----SSCEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH---------------HHcC-----CcceEEEecCC
Confidence 4688999999999999999885 5788765 44431 1111110 1111 1222 456888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 86 d~~~v~~~~~~~~~~~g~iD~lvnnAg 112 (277)
T 3gvc_A 86 DEQQIIAMVDACVAAFGGVDKLVANAG 112 (277)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888888777766654 7888887655
No 421
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.96 E-value=0.16 Score=44.97 Aligned_cols=114 Identities=11% Similarity=0.028 Sum_probs=63.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDf 113 (300)
+|||+|+|+ |+||..+++.+.+ .++++++ +++...-.++. ++. +|. +.+.+++.++.....++ +|+|+
T Consensus 6 ~mkI~IIG~-G~~G~sLA~~L~~-~G~~V~~-~~~~~~~~~aD-ila------vP~-~ai~~vl~~l~~~l~~g~ivvd~ 74 (232)
T 3dfu_A 6 RLRVGIFDD-GSSTVNMAEKLDS-VGHYVTV-LHAPEDIRDFE-LVV------IDA-HGVEGYVEKLSAFARRGQMFLHT 74 (232)
T ss_dssp CCEEEEECC-SCCCSCHHHHHHH-TTCEEEE-CSSGGGGGGCS-EEE------ECS-SCHHHHHHHHHTTCCTTCEEEEC
T ss_pred CcEEEEEee-CHHHHHHHHHHHH-CCCEEEE-ecCHHHhccCC-EEE------EcH-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 479999997 9999999999875 4788776 44321001111 111 121 24455544332222344 78887
Q ss_pred C--CchhHHHHHHHHHHcCCCEEEeCC---------CCCHHHHHHHHHHhhhCCCeEEEc
Q 022250 114 T--DASTVYDNVKQATAFGMRSVVYVP---------HIQLETVSALSAFCDKASMGCLIA 162 (300)
Q Consensus 114 T--~p~~~~~~~~~al~~G~~vVigTT---------G~~~e~~~~L~~~a~~~~i~iv~a 162 (300)
| .+.... ..+.+.|..+|-+-| +.+++..+.++++.+.-|..+++-
T Consensus 75 sgs~~~~vl---~~~~~~g~~fvg~HPm~g~~~~i~a~d~~a~~~l~~L~~~lG~~vv~~ 131 (232)
T 3dfu_A 75 SLTHGITVM---DPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEI 131 (232)
T ss_dssp CSSCCGGGG---HHHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTTCEECCC
T ss_pred CCcCHHHHH---HHHHhCCCcEEEeeeCCCCceeeeCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 5 333333 333466765443211 225556778888888877555543
No 422
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.93 E-value=0.16 Score=49.17 Aligned_cols=158 Identities=14% Similarity=0.210 Sum_probs=81.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCccee----cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~DVV 110 (300)
.|||.|+|+ |++|+.+++.+. ..+.+++ ++|.+. ..+..+. ..+++.+. ++.+-+.+. .-.++|++
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~-~~~~~v~-vId~d~--~~~~~~~---~~~~~~~i~Gd~~~~~~L~~A--gi~~ad~~ 72 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLV-GENNDIT-IVDKDG--DRLRELQ---DKYDLRVVNGHASHPDVLHEA--GAQDADML 72 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTC-STTEEEE-EEESCH--HHHHHHH---HHSSCEEEESCTTCHHHHHHH--TTTTCSEE
T ss_pred cCEEEEECC-CHHHHHHHHHHH-HCCCCEE-EEECCH--HHHHHHH---HhcCcEEEEEcCCCHHHHHhc--CCCcCCEE
Confidence 589999998 999999999876 4577766 677642 1122221 12344332 233322211 11468999
Q ss_pred EEcCCchhH-HHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHHhh--hCCCeEEEcCCCcHHHHHHHHHHHHhcc-----
Q 022250 111 IDFTDASTV-YDNVKQATA-FGMRSVVYVPHIQLETVSALSAFCD--KASMGCLIAPTLSIGSILLQQAAISASF----- 181 (300)
Q Consensus 111 IDfT~p~~~-~~~~~~al~-~G~~vVigTTG~~~e~~~~L~~~a~--~~~i~iv~a~N~SiGv~ll~~~a~~~~~----- 181 (300)
|=.|.-+.. .-....|.+ ++.+-++.-. -+++..+..+.+-. .-++-.+++|-....-.+...+..--+.
T Consensus 73 ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~-~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~p~~~~~~~f 151 (461)
T 4g65_A 73 VAVTNTDETNMAACQVAFTLFNTPNRIARI-RSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSF 151 (461)
T ss_dssp EECCSCHHHHHHHHHHHHHHHCCSSEEEEC-CCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTSTTCSEEEEE
T ss_pred EEEcCChHHHHHHHHHHHHhcCCccceeEe-ccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccCCCeEEEEEe
Confidence 877765543 223334434 3666555433 22332222233322 3456678877766665444333111000
Q ss_pred CCCCeEEEEccCCCCCCC-chHHH
Q 022250 182 HYKNVEIVESRPNARDFP-SPDAT 204 (300)
Q Consensus 182 ~~~dieIiE~Hh~K~DaP-SGTA~ 204 (300)
..-.++++|..- ..|+| .|+.+
T Consensus 152 ~~g~~~l~e~~v-~~~s~l~g~~l 174 (461)
T 4g65_A 152 AEEKVSLVAVKA-YYGGPLVGNAL 174 (461)
T ss_dssp TTTTEEEEEEEC-CTTSSSTTCBH
T ss_pred ccceEEEEEEEe-cCCCeecCCcH
Confidence 123577777642 22333 45544
No 423
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=92.93 E-value=0.22 Score=46.08 Aligned_cols=62 Identities=24% Similarity=0.280 Sum_probs=43.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|+ |+||+.+++.+.. -++++++ +|+... ..+ ... + .+.++++++. .+|+|+...
T Consensus 146 g~~vgIiG~-G~IG~~~A~~l~~-~G~~V~~-~d~~~~-~~~-------~~~-~-~~~~l~ell~------~aDvV~~~~ 206 (331)
T 1xdw_A 146 NCTVGVVGL-GRIGRVAAQIFHG-MGATVIG-EDVFEI-KGI-------EDY-C-TQVSLDEVLE------KSDIITIHA 206 (331)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSCC-CSC-------TTT-C-EECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEEE-ECCCcc-HHH-------Hhc-c-ccCCHHHHHh------hCCEEEEec
Confidence 478999998 9999999998874 5888764 675431 111 111 2 2458999985 689999765
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 207 p 207 (331)
T 1xdw_A 207 P 207 (331)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.86 E-value=0.31 Score=44.74 Aligned_cols=31 Identities=32% Similarity=0.301 Sum_probs=25.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
-+|.|+|++|.+|+.+++.+.. .+.++++..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~-~Ga~V~~~~ 201 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKA-MGYRVLGID 201 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCcEEEEc
Confidence 4699999999999999998764 577877643
No 425
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.84 E-value=0.23 Score=46.11 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=54.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-ee---cCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VM---SDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v~---~dl~~~l~~~~~~~~~DVVI 111 (300)
-+|.|+|++|.+|...++.++...+.+++++...+ ... +++ .++|.. +. +++.+.+.+. ....+|+|+
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~---~~~-~~~---~~lGad~vi~~~~~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRP---ETQ-EWV---KSLGAHHVIDHSKPLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSH---HHH-HHH---HHTTCSEEECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCH---HHH-HHH---HHcCCCEEEeCCCCHHHHHHHh-cCCCceEEE
Confidence 46999997799999999977654678887654321 111 111 122221 11 2344444321 123689999
Q ss_pred EcCCchhHHHHHHHHHHc-CCCEEEeCC
Q 022250 112 DFTDASTVYDNVKQATAF-GMRSVVYVP 138 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~-G~~vVigTT 138 (300)
|++......+.+..+++. |.=+++|.+
T Consensus 245 d~~g~~~~~~~~~~~l~~~G~iv~~g~~ 272 (363)
T 4dvj_A 245 STTHTDKHAAEIADLIAPQGRFCLIDDP 272 (363)
T ss_dssp ECSCHHHHHHHHHHHSCTTCEEEECSCC
T ss_pred ECCCchhhHHHHHHHhcCCCEEEEECCC
Confidence 998765555555445444 444445544
No 426
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=92.84 E-value=0.73 Score=41.77 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=27.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
+++|.|.|++|.+|+.+++.+.+ .+.++++...
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQT-MGATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHh-CCCeEEEEeC
Confidence 37899999999999999999886 4788887543
No 427
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=92.80 E-value=0.18 Score=46.19 Aligned_cols=72 Identities=15% Similarity=0.236 Sum_probs=43.4
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc-------EEEEEEecCC-----CCcchhhhhcCcCC--CCcceecCHHHHHh
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-------EVAGAIDSHS-----VGEDIGMVCDMEQP--LEIPVMSDLTMVLG 99 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-------eLvg~vd~~~-----~g~d~~~~~g~~~~--~gv~v~~dl~~~l~ 99 (300)
++|||.|+|++|.+|+.++..+.+. ++ +++. +|... .|. +.++.....+ .++...+++.+++
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~-g~~~~~~~~ev~l-~D~~~~~~~~~g~-~~dl~~~~~~~~~di~~~~~~~~a~- 78 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAG-EMLGKDQPVILQL-LEIPQAMKALEGV-VMELEDCAFPLLAGLEATDDPKVAF- 78 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT-TTTCTTCCEEEEE-ECCGGGHHHHHHH-HHHHHTTTCTTEEEEEEESCHHHHT-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCCCCCCCCEEEE-EeCCCchhhccch-hhhhhcccccccCCeEeccChHHHh-
Confidence 4589999999999999999988764 43 6665 66531 010 1111110001 1233345777777
Q ss_pred cccccCCccEEEEcC
Q 022250 100 SISQSKARAVVIDFT 114 (300)
Q Consensus 100 ~~~~~~~~DVVIDfT 114 (300)
.++|+||.+.
T Consensus 79 -----~~~D~Vih~A 88 (327)
T 1y7t_A 79 -----KDADYALLVG 88 (327)
T ss_dssp -----TTCSEEEECC
T ss_pred -----CCCCEEEECC
Confidence 3789998764
No 428
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=92.79 E-value=0.9 Score=43.24 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=31.8
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEec
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDS 69 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~ 69 (300)
.|.+|.|.|+||-+|+...+.+.+.|+ +++++....
T Consensus 8 ~~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag 44 (406)
T 1q0q_A 8 GMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 44 (406)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC
Confidence 378999999999999999999998887 999998764
No 429
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=92.69 E-value=0.35 Score=45.44 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=28.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
+++|.|.|++|.+|+.+++.+. ..+.+++++...
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~R~ 102 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRA 102 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHT-TTEEEEEEEEEC
T ss_pred CCEEEEecCCcHHHHHHHHHHH-cCCCEEEEEECC
Confidence 5799999999999999999985 567888876543
No 430
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.63 E-value=0.11 Score=47.87 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=25.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (300)
|||+|+|+ |.||..++..+...+-. +| ..+|.+
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el-~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEV-VMVDIK 34 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEE-EEECSS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEE-EEEeCc
Confidence 68999998 99999999988765433 54 457754
No 431
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=92.62 E-value=0.49 Score=41.16 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=27.7
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecC
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (300)
.+|..+|.|.|++|.+|+.+++.+.+ .+.+++. ++++
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~-~G~~V~~-~~r~ 55 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKS-KSWNTIS-IDFR 55 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESS
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeCC
Confidence 35667899999999999999999885 5788665 4443
No 432
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.59 E-value=0.93 Score=39.84 Aligned_cols=85 Identities=14% Similarity=0.211 Sum_probs=49.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++.. +++. ....++. +++-.. ....... +..|.+
T Consensus 33 k~vlVTGasggIG~~la~~l~~-~G~~V~~~-~r~~--~~~~~~~--------------~~~~~~-~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQ-QGLKVVGC-ARTV--GNIEELA--------------AECKSA-GYPGTLIPYRCDLS 93 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHHHHHH--------------HHHHHT-TCSSEEEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEE-ECCh--HHHHHHH--------------HHHHhc-CCCceEEEEEecCC
Confidence 5699999999999999999886 57887654 4331 1111110 111100 0000112 335788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++.+.+.+..+.+. ++++|+-..|
T Consensus 94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 94 NEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 888777766655443 6888887665
No 433
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.57 E-value=0.5 Score=41.88 Aligned_cols=105 Identities=14% Similarity=0.152 Sum_probs=53.2
Q ss_pred cCcccccccceeeEeecCCC-CC-cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcce
Q 022250 13 HHISQNVKAKRFISCSTNPP-QS-NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV 90 (300)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~-~~-~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v 90 (300)
||++-+-+.+--..|+.+.+ ++ ..++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+.
T Consensus 2 ~~~~~~~~~~~~~~m~~~~~~~l~gk~~lVTGas~gIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~----------- 66 (271)
T 4ibo_A 2 HHHHHSSGLVPRGSMSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAV-AGARILI-NGTDP--SRVAQT----------- 66 (271)
T ss_dssp ----------------CCGGGCCTTCEEEETTCSSHHHHHHHHHHHH-TTCEEEE-CCSCH--HHHHHH-----------
T ss_pred CCCCCCCCCCCcccCccccccCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH-----------
Confidence 44555555555555555432 12 25689999999999999999885 5777654 34321 111111
Q ss_pred ecCHHHHHhcccccCCcc---EEEEcCCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 91 MSDLTMVLGSISQSKARA---VVIDFTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 91 ~~dl~~~l~~~~~~~~~D---VVIDfT~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.+++-+ ...+ +..|.+.++...+.+..+.+. ++++|+-..|.
T Consensus 67 ---~~~l~~-----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 67 ---VQEFRN-----VGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGI 113 (271)
T ss_dssp ---HHHHHH-----TTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCC
T ss_pred ---HHHHHh-----cCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
Confidence 111111 1222 235788888887777766654 58888876653
No 434
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.56 E-value=1.2 Score=38.30 Aligned_cols=84 Identities=21% Similarity=0.266 Sum_probs=52.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++.+. ..... +..|.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~---~~~~~~~~~D~~ 68 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAR-EGAAVVV-ADINA--EAAEAVA--------------KQIVAD---GGTAISVAVDVS 68 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCEEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEE-EcCCH--HHHHHHH--------------HHHHhc---CCcEEEEEccCC
Confidence 5689999999999999999885 5788665 45432 1111110 111110 01111 346788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 69 ~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 69 DPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 888887777766654 78999877664
No 435
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=92.43 E-value=0.48 Score=42.57 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=26.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (300)
|||.|.|++|.+|+.+++.+.+ .+.+++++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~ 30 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQ-NGHDVIIL 30 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 4899999999999999999885 57888764
No 436
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.38 E-value=1.2 Score=39.92 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=53.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++-.. ...+. +..|.|
T Consensus 32 k~vlVTGas~gIG~~la~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 90 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFAR-RGARLVL-SDVDQ--PALEQAV--------------NGLRGQ---GFDAHGVVCDVR 90 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH--------------HHHHhc---CCceEEEEccCC
Confidence 4699999999999999999885 5788665 44431 1111110 111110 01222 456889
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++.+|+-..|.
T Consensus 91 d~~~v~~~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 91 HLDEMVRLADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp CHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 998888888777665 78999877663
No 437
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.37 E-value=0.91 Score=39.88 Aligned_cols=85 Identities=19% Similarity=0.231 Sum_probs=52.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDf 113 (300)
..+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++-+. ..+.. +..|.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dl 89 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAK-LKSKLVL-WDINK--HGLEETA--------------AKCKGL---GAKVHTFVVDC 89 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCT
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEE-EEcCH--HHHHHHH--------------HHHHhc---CCeEEEEEeeC
Confidence 36799999999999999999886 4788665 44431 1111110 111110 01222 34678
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
+.++...+.+..+.+. ++.+||-..|.
T Consensus 90 ~~~~~v~~~~~~~~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 90 SNREDIYSSAKKVKAEIGDVSILVNNAGV 118 (272)
T ss_dssp TCHHHHHHHHHHHHHHTCCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEECCCc
Confidence 8888877777665553 68888877653
No 438
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=92.29 E-value=0.17 Score=49.03 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=29.2
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
.|++|.|.|+||.+|+.+++.+. ..+.++++....
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~-~~g~~V~~l~R~ 183 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQ-GYSHRIYCFIRA 183 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTB-TTEEEEEEEEES
T ss_pred CCCeEEEECCccchHHHHHHHHH-hcCCEEEEEECC
Confidence 36899999999999999999984 568888877543
No 439
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.23 E-value=0.55 Score=40.79 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=52.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC--cEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG--MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~--~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVI 111 (300)
+.+|.|.|++|.+|+.+++.+.+... .+++.+ +++.. ... .++++... ..... +..
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~-~r~~~--~~~---------------~~~~l~~~---~~~~~~~~~ 79 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT-CRNRE--QAK---------------ELEDLAKN---HSNIHILEI 79 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE-ESCTT--SCH---------------HHHHHHHH---CTTEEEEEC
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEE-ecChh--hhH---------------HHHHhhcc---CCceEEEEe
Confidence 46799999999999999999986432 777754 43320 000 01122110 01222 346
Q ss_pred EcCCchhHHHHHHHHHHc----CCCEEEeCCCC
Q 022250 112 DFTDASTVYDNVKQATAF----GMRSVVYVPHI 140 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~----G~~vVigTTG~ 140 (300)
|++.++...+.+..+.+. ++.+|+-..|.
T Consensus 80 Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 80 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGI 112 (267)
T ss_dssp CTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCC
T ss_pred cCCChHHHHHHHHHHHHhcCCCCccEEEECCCc
Confidence 788888887777655543 68999877653
No 440
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=92.22 E-value=0.099 Score=47.92 Aligned_cols=34 Identities=29% Similarity=0.310 Sum_probs=25.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
|||+|+|++|.+|+.++..+....-..-+..+|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 5899999999999999998876533222345675
No 441
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=92.20 E-value=0.73 Score=40.05 Aligned_cols=86 Identities=13% Similarity=0.144 Sum_probs=54.5
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVID 112 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVID 112 (300)
+|.++.|.|++|.+|+.+++.+.+ .+.+++....++. +..+ .+.+.+.+. ...+. +..|
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~-~G~~v~~~~~~~~---~~~~--------------~~~~~~~~~--~~~~~~~~~D 65 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLA-KGYSVTVTYHSDT---TAME--------------TMKETYKDV--EERLQFVQAD 65 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH---HHHH--------------HHHHHTGGG--GGGEEEEECC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHH-CCCEEEEEcCCCh---HHHH--------------HHHHHHHhc--CCceEEEEec
Confidence 346799999999999999999885 5788876544321 1100 011111100 01222 3568
Q ss_pred cCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.+.++...+.+..+.+. ++++|+=..|
T Consensus 66 l~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 66 VTKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 89888888877777665 7899987666
No 442
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.16 E-value=0.16 Score=48.17 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=42.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|. |+||+.+++.+.. -++++++ +|+.. .. . + .+. .+.++++++. .+|+|+-..
T Consensus 116 g~tvGIIGl-G~IG~~vA~~l~~-~G~~V~~-~d~~~--~~-~---~----~g~-~~~~l~ell~------~aDvV~l~~ 175 (380)
T 2o4c_A 116 ERTYGVVGA-GQVGGRLVEVLRG-LGWKVLV-CDPPR--QA-R---E----PDG-EFVSLERLLA------EADVISLHT 175 (380)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECHHH--HH-H---S----TTS-CCCCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEeC-CHHHHHHHHHHHH-CCCEEEE-EcCCh--hh-h---c----cCc-ccCCHHHHHH------hCCEEEEec
Confidence 368999997 9999999998874 5888765 66531 00 0 0 122 2468889885 689988765
Q ss_pred C
Q 022250 115 D 115 (300)
Q Consensus 115 ~ 115 (300)
+
T Consensus 176 P 176 (380)
T 2o4c_A 176 P 176 (380)
T ss_dssp C
T ss_pred c
Confidence 3
No 443
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.11 E-value=0.19 Score=45.86 Aligned_cols=32 Identities=13% Similarity=0.110 Sum_probs=25.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
-+|.|+|++|.+|...++.+.. .+.++++...
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKM-KGAHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeC
Confidence 4799999889999999997764 6788776543
No 444
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=92.09 E-value=0.48 Score=47.91 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=57.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC-----CC-------cchh--------h-hhcCcCCCCccee-cC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-----VG-------EDIG--------M-VCDMEQPLEIPVM-SD 93 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-----~g-------~d~~--------~-~~g~~~~~gv~v~-~d 93 (300)
.||.|+|+ |.+|..+++.+.. .|+-=+.++|.+. .+ .|+| + +..+.+...+..+ ..
T Consensus 18 s~VlVVGa-GGLGsevak~La~-aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~ 95 (640)
T 1y8q_B 18 GRVLVVGA-GGIGCELLKNLVL-TGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDS 95 (640)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-HTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESC
T ss_pred CeEEEECc-CHHHHHHHHHHHH-cCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecc
Confidence 68999999 9999999999885 4665556777421 01 1111 0 0111011112111 11
Q ss_pred H------HHHHhcccccCCccEEEEcCC-chhHHHHHHHHHHcCCCEEEe-CCCC
Q 022250 94 L------TMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVY-VPHI 140 (300)
Q Consensus 94 l------~~~l~~~~~~~~~DVVIDfT~-p~~~~~~~~~al~~G~~vVig-TTG~ 140 (300)
+ ++.+ ..+|+|||++. +++-...-..|.++++|+|.+ +.|+
T Consensus 96 i~~~~~~~~~~------~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~ 144 (640)
T 1y8q_B 96 IMNPDYNVEFF------RQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGY 144 (640)
T ss_dssp TTSTTSCHHHH------TTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred cchhhhhHhhh------cCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 1 2444 47899999874 454455667889999999955 3354
No 445
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=92.08 E-value=0.85 Score=44.38 Aligned_cols=173 Identities=12% Similarity=0.147 Sum_probs=83.8
Q ss_pred ccccccceeeEeecCCCCC-cceEEEEcCCchH-HHHHHHHHHhc-CCc--EEEEEEecCCC---C-cchh-hh-hcCcC
Q 022250 16 SQNVKAKRFISCSTNPPQS-NIKVIINGAVKEI-GRAAVIAVTKA-RGM--EVAGAIDSHSV---G-EDIG-MV-CDMEQ 84 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~-~ikV~V~Ga~GrM-G~~i~~~i~~~-~~~--eLvg~vd~~~~---g-~d~~-~~-~g~~~ 84 (300)
|-.--|.+.--|+. |.| ++||+|+|+ |.. |..++..+... +++ .=+..+|.+.. + .+.. .+ .+...
T Consensus 10 ~~~~~~~~~~~~~~--m~m~~~KIaVIGa-Gsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~ 86 (472)
T 1u8x_X 10 GVDLGTENLYFQSN--MKKKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAP 86 (472)
T ss_dssp ------------------CCCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCT
T ss_pred ccccCccceeeccc--cccCCCEEEEECC-CHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCC
Confidence 34445666777766 222 369999998 776 66677666654 233 22446775320 0 0111 11 11112
Q ss_pred CCCcceecCHHHHHhcccccCCccEEEEcCCchhHHHH---HHHHHHcCCCEEEeCCC---CC---------HHHHHHHH
Q 022250 85 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDN---VKQATAFGMRSVVYVPH---IQ---------LETVSALS 149 (300)
Q Consensus 85 ~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~p~~~~~~---~~~al~~G~~vVigTTG---~~---------~e~~~~L~ 149 (300)
+..+..++|+++++ .++|+||........... -+..+++|+-- =.|+| +. .+-.+.+.
T Consensus 87 ~~~I~~t~D~~eal------~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~-~eT~G~ggl~~~~rni~i~~~i~~~i~ 159 (472)
T 1u8x_X 87 DIEFAATTDPEEAF------TDVDFVMAHIRVGKYAMRALDEQIPLKYGVVG-QETCGPGGIAYGMRSIGGVLEILDYME 159 (472)
T ss_dssp TSEEEEESCHHHHH------SSCSEEEECCCTTHHHHHHHHHHHHHTTTCCC-CSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCHHHHH------cCCCEEEEcCCCccccccchhhhhhhhcCccc-ccccCchhHHHHhhhHHHHHHHHHHHH
Confidence 33455568998887 489999965543332221 23456777753 23332 21 12234455
Q ss_pred HHhhhCCCeEEEcCCCcHHHHHHHHHHHHhccCCCCeEEEEccCCCCCCCchHHHHHHHHH
Q 022250 150 AFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIANNL 210 (300)
Q Consensus 150 ~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~~~~~~dieIiE~Hh~K~DaPSGTA~~l~~~i 210 (300)
+.|-+ .+++ |+|=-+.++.++++... +...++=. -+.|+++...+++.+
T Consensus 160 ~~~P~---A~ii--~~TNPvdi~T~~~~k~~---p~~rViG~----c~~~~r~~~~la~~l 208 (472)
T 1u8x_X 160 KYSPD---AWML--NYSNPAAIVAEATRRLR---PNSKILNI----CDMPVGIEDRMAQIL 208 (472)
T ss_dssp HHCTT---CEEE--ECCSCHHHHHHHHHHHS---TTCCEEEC----CSHHHHHHHHHHHHH
T ss_pred HHCCC---eEEE--EeCCcHHHHHHHHHHhC---CCCCEEEe----CCcHHHHHHHHHHHh
Confidence 55533 3444 66666677777776654 34445555 234567777777765
No 446
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.06 E-value=0.16 Score=47.02 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=42.4
Q ss_pred CCCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC--C-CcchhhhhcCc-CCCCcceecCHHHHHhcccccCCc
Q 022250 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--V-GEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKAR 107 (300)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--~-g~d~~~~~g~~-~~~gv~v~~dl~~~l~~~~~~~~~ 107 (300)
.+.++||+|+|+ |.+|..++-.+...+-+.=+..+|... . |. +.++.... ....+.++.+..+.+ .++
T Consensus 6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~-~~dl~~~~~~~~~~~i~~~~~~a~------~~a 77 (326)
T 2zqz_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGD-AIDLSNALPFTSPKKIYSAEYSDA------KDA 77 (326)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHH-HHHHHTTGGGSCCCEEEECCGGGG------GGC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHH-HHHHHHHHHhcCCeEEEECCHHHh------CCC
Confidence 345689999998 999999998887655332234567532 0 10 11121110 002334443444555 478
Q ss_pred cEEEEcC
Q 022250 108 AVVIDFT 114 (300)
Q Consensus 108 DVVIDfT 114 (300)
|+||...
T Consensus 78 DvVii~a 84 (326)
T 2zqz_A 78 DLVVITA 84 (326)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9998654
No 447
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=92.00 E-value=1 Score=38.86 Aligned_cols=84 Identities=20% Similarity=0.297 Sum_probs=52.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc---EEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVI 111 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VVI 111 (300)
..++.|.|++|.+|+.+++.+.+ .+.+++.....+. ....++ .+.+.+ ...+ +..
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~-~G~~V~~~~~~~~--~~~~~~---------------~~~~~~----~~~~~~~~~~ 61 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAE-EGYNVAVNYAGSK--EKAEAV---------------VEEIKA----KGVDSFAIQA 61 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHH----TTSCEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCCH--HHHHHH---------------HHHHHh----cCCcEEEEEc
Confidence 35689999999999999999885 5788765433221 111111 111110 1222 345
Q ss_pred EcCCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 112 DFTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
|.+.++...+.+..+.+. ++++|+-..|.
T Consensus 62 Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 3osu_A 62 NVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92 (246)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 788888887777766655 78888876653
No 448
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.98 E-value=0.8 Score=40.13 Aligned_cols=84 Identities=21% Similarity=0.213 Sum_probs=52.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. .+..+.. +++-+. ...++. +..|.|
T Consensus 11 k~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~--~~~~~~~~~~Dv~ 70 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFAR-AGANVAV-AGRST--ADIDACV--------------ADLDQL--GSGKVIGVQTDVS 70 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHTT--SSSCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhh--CCCcEEEEEcCCC
Confidence 5789999999999999999885 5777765 44432 1111110 111110 001122 355888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+=.-|
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 71 DRAQCDALAGRAVEEFGGIDVVCANAG 97 (262)
T ss_dssp SHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 888888877766665 7888887655
No 449
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.97 E-value=0.31 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=25.7
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (300)
++||+|+|+ |.||..++..+... ++ +|+ .+|.+
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~-~~~~v~-l~Di~ 38 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIK-QLGDVV-LFDIA 38 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCEEE-EECSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCceEE-EEeCC
Confidence 479999997 99999999988754 44 644 57754
No 450
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.97 E-value=0.13 Score=47.36 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=54.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcCC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT~ 115 (300)
-+|.|+|++|.+|...++.+. ..+.++++. .++.. .+...-.|. .. +....++.+.+.+......+|+++|++.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~-~~~~~-~~~~~~lGa--~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIAL-ARGARVFAT-ARGSD-LEYVRDLGA--TP-IDASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEE-ECHHH-HHHHHHHTS--EE-EETTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCCEEEEE-eCHHH-HHHHHHcCC--CE-eccCCCHHHHHHHHhcCCCceEEEECCC
Confidence 469999988999999999776 568898887 43210 111111121 11 2112334443321111236899999987
Q ss_pred chhHHHHHHHHHHcCCCEEEeCCC
Q 022250 116 ASTVYDNVKQATAFGMRSVVYVPH 139 (300)
Q Consensus 116 p~~~~~~~~~al~~G~~vVigTTG 139 (300)
.+.....+......|.=+++|..+
T Consensus 226 ~~~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 226 GPVLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp THHHHHHHHHEEEEEEEEESCCCS
T ss_pred cHHHHHHHHHHhcCCeEEEEcccC
Confidence 654444444444455555566543
No 451
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=91.91 E-value=0.57 Score=40.66 Aligned_cols=81 Identities=23% Similarity=0.240 Sum_probs=53.2
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc-cEEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-AVVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-DVVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +.+. ... -+..|.+
T Consensus 10 k~vlITGas~gIG~~~a~~l~~-~G~~V~~-~~r~~--~~~~~~~---------------~~~~-----~~~~~~~~D~~ 65 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAK-GGAKVVI-VDRDK--AGAERVA---------------GEIG-----DAALAVAADIS 65 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH---------------HHHC-----TTEEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEE-EcCCH--HHHHHHH---------------HHhC-----CceEEEEecCC
Confidence 5799999999999999999885 5788665 45432 1111111 1111 122 2456888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~ 93 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGI 93 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 888888877777665 78899877653
No 452
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=91.89 E-value=0.67 Score=41.30 Aligned_cols=83 Identities=20% Similarity=0.302 Sum_probs=51.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
..+.|.|++|.+|+.+++.+.+ .+..++. ++++. ....++. +++.+. ...+. +..|.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAA-DGVTVGA-LGRTR--TEVEEVA--------------DEIVGA---GGQAIALEADVS 87 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHHH--------------HHHTTT---TCCEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhc---CCcEEEEEccCC
Confidence 4688999999999999999885 5777765 44431 1111110 111100 01111 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 88 DELQMRNAVRDLVLKFGHLDIVVANAG 114 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 888888877776654 7888886554
No 453
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=91.75 E-value=1.3 Score=38.64 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=53.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++...+++. ....+. .+.+.+ ....+. +..|.|
T Consensus 5 k~vlVTGas~gIG~aia~~l~~-~G~~vv~~~~r~~--~~~~~~---------------~~~~~~--~~~~~~~~~~Dv~ 64 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAE-NGYNIVINYARSK--KAALET---------------AEEIEK--LGVKVLVVKANVG 64 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHT--TTCCEEEEECCTT
T ss_pred CEEEEecCCchHHHHHHHHHHH-CCCEEEEEcCCCH--HHHHHH---------------HHHHHh--cCCcEEEEEcCCC
Confidence 4689999999999999999885 5888876555432 111111 111110 001222 345888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+=.-|
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 65 QPAKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888888887776654 6888886654
No 454
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.75 E-value=0.12 Score=47.49 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=26.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEe
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (300)
-+|.|+|++|.+|...++.+.. .+.++++...
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~-~Ga~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKG-MGAKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeC
Confidence 4699999999999999997764 5788876554
No 455
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=91.72 E-value=0.69 Score=40.75 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=53.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc-cEEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-AVVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-DVVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+.. +.+. ... -+..|.|
T Consensus 12 k~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r~~--~~~~~~~---------------~~~~-----~~~~~~~~Dv~ 67 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLAR-AGARVVL-ADLPE--TDLAGAA---------------ASVG-----RGAVHHVVDLT 67 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EECTT--SCHHHHH---------------HHHC-----TTCEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EcCCH--HHHHHHH---------------HHhC-----CCeEEEECCCC
Confidence 4689999999999999999885 5787664 45432 1111110 1111 122 2456889
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 95 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAH 95 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 888888877776665 78898876653
No 456
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.70 E-value=0.29 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=26.1
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEEecC
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSH 70 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~ 70 (300)
++|||+|+|+ |.||..++..+... +. +++ .+|++
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~-g~~~~V~-l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQR-GIAREIV-LEDIA 41 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHT-TCCSEEE-EECSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCCEEE-EEeCC
Confidence 3579999998 99999999988754 55 665 56654
No 457
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.57 E-value=0.24 Score=47.02 Aligned_cols=59 Identities=14% Similarity=0.082 Sum_probs=39.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
.+|+|+|. |+||+.+++.+.. -++++.+ +|+.. ... . ....+.+++++++ .+|+|+-.+
T Consensus 120 ktvGIIGl-G~IG~~vA~~l~a-~G~~V~~-~d~~~--~~~--------~-~~~~~~sl~ell~------~aDiV~l~~ 178 (381)
T 3oet_A 120 RTIGIVGV-GNVGSRLQTRLEA-LGIRTLL-CDPPR--AAR--------G-DEGDFRTLDELVQ------EADVLTFHT 178 (381)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECHHH--HHT--------T-CCSCBCCHHHHHH------HCSEEEECC
T ss_pred CEEEEEeE-CHHHHHHHHHHHH-CCCEEEE-ECCCh--HHh--------c-cCcccCCHHHHHh------hCCEEEEcC
Confidence 68999998 9999999998874 5888775 56421 000 0 1112457777774 577777554
No 458
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=91.47 E-value=0.46 Score=40.60 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=50.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+.. +++... ....+. +..|.+
T Consensus 3 k~vlITGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~--~~~~~~~~~~D~~ 62 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALAR-DGYALAL-GARSV--DRLEKIA--------------HELMQE--QGVEVFYHHLDVS 62 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhh--cCCeEEEEEeccC
Confidence 4689999999999999999885 5777654 44431 1111110 111100 001222 235788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 63 ~~~~v~~~~~~~~~~~g~id~li~~Ag~ 90 (235)
T 3l77_A 63 KAESVEEFSKKVLERFGDVDVVVANAGL 90 (235)
T ss_dssp CHHHHHHHCC-HHHHHSSCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCcc
Confidence 888877777666554 68888876653
No 459
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=91.42 E-value=0.22 Score=41.43 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=26.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (300)
||||.|.|++|.+|+.+++.+. .+.+++.+
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~--~g~~V~~~ 32 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE--KKAEVITA 32 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT--TTSEEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH--CCCeEEEE
Confidence 4689999999999999999987 58887764
No 460
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=91.42 E-value=1.6 Score=38.56 Aligned_cols=82 Identities=18% Similarity=0.194 Sum_probs=53.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc---EEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VVID 112 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++-+ ...+ +..|
T Consensus 5 k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~-----~~~~~~~~~~D 61 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGV-AGAKILL-GARRQ--ARIEAIA--------------TEIRD-----AGGTALAQVLD 61 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHHH--------------HHHHH-----TTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH--------------HHHHh-----cCCcEEEEEcC
Confidence 5689999999999999999885 5788765 44431 1111110 11111 1222 3468
Q ss_pred cCCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 113 FTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.|.++...+.+..+.+. ++.+||=.-|.
T Consensus 62 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 62 VTDRHSVAAFAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 89999888888777665 78999876653
No 461
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=91.41 E-value=2 Score=38.06 Aligned_cols=89 Identities=20% Similarity=0.225 Sum_probs=53.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhccccc-CCcc-EEEEc
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS-KARA-VVIDF 113 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~-~~~D-VVIDf 113 (300)
..+.|.|++|.+|+.+++.+.+ .+..++. ++++. .+..++ ...++++.+++... ..+. +..|.
T Consensus 10 k~vlVTGas~GIG~aia~~l~~-~G~~V~~-~~r~~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv 74 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAA-DGANVAL-VAKSA--EPHPKL-----------PGTIYTAAKEIEEAGGQALPIVGDI 74 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHT-TTCEEEE-EESCC--SCCSSS-----------CCCHHHHHHHHHHHTSEEEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EECCh--hhhhhh-----------hHHHHHHHHHHHhcCCcEEEEECCC
Confidence 4689999999999999999885 5788765 44432 110000 01112221110000 1122 34588
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
|.++...+.+..+.+. +++++|-..|
T Consensus 75 ~~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 75 RDGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9999888888777665 7899987665
No 462
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.40 E-value=0.15 Score=46.25 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=25.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
-+|.|+|++|.+|+.+++.+.. .+.++++..
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~-~G~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKA-LGAKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-HTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-cCCEEEEEe
Confidence 4799999889999999998775 467877643
No 463
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=91.37 E-value=0.25 Score=47.41 Aligned_cols=115 Identities=10% Similarity=0.071 Sum_probs=60.3
Q ss_pred CCcceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEE
Q 022250 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (300)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVID 112 (300)
-++|||.|+|. |.-..+++..+.++++++-+-+.. ...|... .. ....+ -+.|++.+++- .+..++|+|+-
T Consensus 19 p~~m~ilvlG~-ggre~ala~~l~~s~~v~~v~~~p-gn~g~~~--~~---~~~~i-~~~d~~~l~~~-a~~~~id~vv~ 89 (442)
T 3lp8_A 19 PGSMNVLVIGS-GGREHSMLHHIRKSTLLNKLFIAP-GREGMSG--LA---DIIDI-DINSTIEVIQV-CKKEKIELVVI 89 (442)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHTTCTTEEEEEEEE-CCGGGTT--TS---EECCC-CTTCHHHHHHH-HHHTTCCEEEE
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHhCCCCCEEEEEC-CChHHhh--cc---ceeec-CcCCHHHHHHH-HHHhCCCEEEE
Confidence 35799999997 744566788888888765444432 2211110 00 00111 13466665432 22357898773
Q ss_pred cCCchhHH--HHHHHHHHcCCCEEEeCC--CCC-HHHHHHHHHHhhhCCCeE
Q 022250 113 FTDASTVY--DNVKQATAFGMRSVVYVP--HIQ-LETVSALSAFCDKASMGC 159 (300)
Q Consensus 113 fT~p~~~~--~~~~~al~~G~~vVigTT--G~~-~e~~~~L~~~a~~~~i~i 159 (300)
.|+... ..+..+.+.|++++ |.+ ... .......++++++.|+|+
T Consensus 90 --g~E~~l~~~~~~~l~~~Gi~~~-Gp~~~a~~~~~dK~~~k~~l~~~GIp~ 138 (442)
T 3lp8_A 90 --GPETPLMNGLSDALTEEGILVF-GPSKAAARLESSKGFTKELCMRYGIPT 138 (442)
T ss_dssp --CSHHHHHTTHHHHHHHTTCEEE-SCCHHHHHHHHCHHHHHHHHHHHTCCB
T ss_pred --CCcHHHHHHHHHHHHhcCCcEe-cCCHHHHHHhhCHHHHHHHHHHCCCCC
Confidence 244332 45566667888877 432 111 112233556667777764
No 464
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=91.32 E-value=0.69 Score=40.99 Aligned_cols=82 Identities=11% Similarity=0.109 Sum_probs=49.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+. .+.+.+ ..++. +..|.+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~-~G~~V~~-~~r~~--~~~~~~---------------~~~l~~---~~~~~~~~~Dv~ 87 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLE-AGARVFI-CARDA--EACADT---------------ATRLSA---YGDCQAIPADLS 87 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHH---------------HHHHTT---SSCEEECCCCTT
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH---------------HHHHHh---cCceEEEEeeCC
Confidence 4699999999999999999885 5788664 44431 111110 011110 01111 234778
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++.+|+-..|
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 88 SEAGARRLAQALGELSARLDILVNNAG 114 (276)
T ss_dssp SHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 888777777666553 6888887655
No 465
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=91.32 E-value=1.9 Score=37.31 Aligned_cols=84 Identities=24% Similarity=0.332 Sum_probs=51.6
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDf 113 (300)
..++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++-.. ...+. +..|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~---~~~~~~~~~D~ 60 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVK-DGFAVAI-ADYND--ATAKAVA--------------SEINQA---GGHAVAVKVDV 60 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCT
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhc---CCcEEEEEecC
Confidence 35689999999999999999885 5788765 44431 1111110 111100 01122 34578
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
+.++...+.+..+.+. ++++|+-..|
T Consensus 61 ~~~~~v~~~~~~~~~~~g~id~lv~nAg 88 (256)
T 1geg_A 61 SDRDQVFAAVEQARKTLGGFDVIVNNAG 88 (256)
T ss_dssp TSHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 8888887777766554 6888887665
No 466
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=91.31 E-value=1.3 Score=38.77 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=52.8
Q ss_pred cCCCCC--cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCC
Q 022250 29 TNPPQS--NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (300)
Q Consensus 29 ~~~~~~--~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (300)
..|.+| ...+.|.|++|.+|+.+++.+.+ .+..++....+.. ...... .++.... ...
T Consensus 17 ~~p~~~~~~k~vlITGas~gIG~~~a~~l~~-~G~~v~~~~~~~~--~~~~~~--------------~~~~~~~---~~~ 76 (269)
T 3gk3_A 17 QGPGSMQAKRVAFVTGGMGGLGAAISRRLHD-AGMAVAVSHSERN--DHVSTW--------------LMHERDA---GRD 76 (269)
T ss_dssp -------CCCEEEETTTTSHHHHHHHHHHHT-TTCEEEEEECSCH--HHHHHH--------------HHHHHTT---TCC
T ss_pred CCchhhhcCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCch--HHHHHH--------------HHHHHhc---CCc
Confidence 344443 24578899999999999999885 5788765432221 111110 0111100 012
Q ss_pred cc-EEEEcCCchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 107 RA-VVIDFTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 107 ~D-VVIDfT~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
+. +..|++.++.+.+.+..+.+. ++++||-..|.
T Consensus 77 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~ 113 (269)
T 3gk3_A 77 FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGI 113 (269)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 22 346889998888887777665 78999877653
No 467
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=91.31 E-value=0.94 Score=39.08 Aligned_cols=84 Identities=20% Similarity=0.169 Sum_probs=49.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++.+ +++. .+..+. ++++.++. ..... +..|.+
T Consensus 15 k~vlITGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~~~~--------------~~~l~~~~--~~~~~~~~~Dl~ 74 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAA-AGANVAVI-YRSA--ADAVEV--------------TEKVGKEF--GVKTKAYQCDVS 74 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-TTEEEEEE-ESSC--TTHHHH--------------HHHHHHHH--TCCEEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCeEEEE-eCcc--hhhHHH--------------HHHHHHhc--CCeeEEEEeeCC
Confidence 5799999999999999999886 57887654 4422 111110 11111000 01222 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. .+.+|+-..|
T Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~Ag 101 (265)
T 1h5q_A 75 NTDIVTKTIQQIDADLGPISGLIANAG 101 (265)
T ss_dssp CHHHHHHHHHHHHHHSCSEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 888777777665542 3666776554
No 468
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=91.29 E-value=0.54 Score=41.79 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.6
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
.+|.|.|++|.+|+.+++.+.+ .+.++++..
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLE-NGYSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHH-CCCEEEEEE
Confidence 4799999999999999999875 578888755
No 469
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.24 E-value=1 Score=38.86 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=27.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
+.+|.|.|++|.+|+.+++.+.+..+.+++.+.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~ 36 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTA 36 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEe
Confidence 467999999999999999998863678877643
No 470
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=91.24 E-value=0.32 Score=46.11 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=61.5
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCC-cEEEEEEe-cCCC---Ccchhhhh----cCcC-----CCCccee---cCHHHH
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAID-SHSV---GEDIGMVC----DMEQ-----PLEIPVM---SDLTMV 97 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd-~~~~---g~d~~~~~----g~~~-----~~gv~v~---~dl~~~ 97 (300)
|.||.|.|+||-+|+.-.+.+.+.|+ +++++... .... .+.+.++- .+.. ..++.++ +.+.++
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~l~~~ 100 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRL 100 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHHHHHH
Confidence 57899999999999999999998887 99999876 3221 01111110 0000 0011222 123333
Q ss_pred HhcccccCCccEEEEcCCchhHHHHHHHHHHcCCCEEEe
Q 022250 98 LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVY 136 (300)
Q Consensus 98 l~~~~~~~~~DVVIDfT~p~~~~~~~~~al~~G~~vVig 136 (300)
.. ..++|+|+-.-.-.+-..-...|+++|+.+-..
T Consensus 101 a~----~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLA 135 (398)
T 2y1e_A 101 VE----QTEADVVLNALVGALGLRPTLAALKTGARLALA 135 (398)
T ss_dssp HH----HSCCSEEEECCCSGGGHHHHHHHHHHTCEEEEC
T ss_pred hc----CCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEc
Confidence 32 246899987766666677777888999887665
No 471
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.23 E-value=0.17 Score=46.03 Aligned_cols=125 Identities=10% Similarity=0.059 Sum_probs=64.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhcC-cCCCCccee--cCHHHHHhcccccCCccEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDM-EQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~~~~~g~-~~~~gv~v~--~dl~~~l~~~~~~~~~DVV 110 (300)
..+|+|+|+ |.||+.++..+.+ .++ +++ +++++. ..+..++.. ....+ .+. +++.+.+ .++|+|
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~-~G~~~V~-v~nR~~--~ka~~la~~~~~~~~-~~~~~~~~~~~~------~~aDiv 208 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLS-TAAERID-MANRTV--EKAERLVREGDERRS-AYFSLAEAETRL------AEYDII 208 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHT-TTCSEEE-EECSSH--HHHHHHHHHSCSSSC-CEECHHHHHHTG------GGCSEE
T ss_pred CCEEEEECc-HHHHHHHHHHHHH-CCCCEEE-EEeCCH--HHHHHHHHHhhhccC-ceeeHHHHHhhh------ccCCEE
Confidence 368999998 9999999999875 466 554 566542 222223210 00111 121 3444554 378999
Q ss_pred EEcCCchhHH-----HHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh
Q 022250 111 IDFTDASTVY-----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (300)
Q Consensus 111 IDfT~p~~~~-----~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~ 179 (300)
|.+|+..... ..-..+++.+.-++--.+ ++.+. .|.+.+++.|..++= .+++ |+.|.++.+
T Consensus 209 In~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y--~P~~T-~ll~~A~~~G~~~v~----Gl~M-Lv~Qa~~af 274 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY--NPLET-KWLKEAKARGARVQN----GVGM-LVYQGALAF 274 (297)
T ss_dssp EECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC--SSSSC-HHHHHHHHTTCEEEC----SHHH-HHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC--CCCCC-HHHHHHHHCcCEEEC----CHHH-HHHHHHHHH
Confidence 9988543211 001122334443332122 23222 366677888876542 2443 445555444
No 472
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=91.21 E-value=0.48 Score=43.96 Aligned_cols=62 Identities=18% Similarity=0.130 Sum_probs=43.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
..+|+|+|. |++|+.+++.+.. =++++++ +|+.. .+... +.++ .+.++++++. .+|+|+-..
T Consensus 141 g~tvGIiG~-G~IG~~va~~~~~-fg~~v~~-~d~~~--~~~~~------~~~~-~~~~l~ell~------~sDivslh~ 202 (334)
T 3kb6_A 141 RLTLGVIGT-GRIGSRVAMYGLA-FGMKVLC-YDVVK--REDLK------EKGC-VYTSLDELLK------ESDVISLHV 202 (334)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSC--CHHHH------HTTC-EECCHHHHHH------HCSEEEECC
T ss_pred CcEEEEECc-chHHHHHHHhhcc-cCceeee-cCCcc--chhhh------hcCc-eecCHHHHHh------hCCEEEEcC
Confidence 368999997 9999999998764 5888875 66532 11111 1222 3578999995 689988654
No 473
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=91.19 E-value=0.69 Score=40.34 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=52.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+. .+.+. .... +..|.+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~---------------~~~~~-----~~~~~~~~D~~ 64 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVR-EGATVAI-ADIDI--ERARQA---------------AAEIG-----PAAYAVQMDVT 64 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHH---------------HHHHC-----TTEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH---------------HHHhC-----CCceEEEeeCC
Confidence 4699999999999999999885 5788664 45431 111111 01111 1222 446888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 65 RQDSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 888888777766665 68888877654
No 474
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.17 E-value=0.19 Score=45.75 Aligned_cols=31 Identities=26% Similarity=0.313 Sum_probs=25.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
-+|.|+|++|.+|+.+++.+.. .+.++++..
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~-~G~~Vi~~~ 177 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARH-LGATVIGTV 177 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHH-CCCEEEEEe
Confidence 4699999889999999998775 577877643
No 475
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.16 E-value=1.3 Score=39.56 Aligned_cols=83 Identities=20% Similarity=0.122 Sum_probs=51.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++ .+++.+. ..++. +..|.+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~-~G~~V~~-~~r~~--~~~~~~--------------~~~l~~~---~~~~~~~~~Dv~ 93 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAK-AGATIVF-NDINQ--ELVDRG--------------MAAYKAA---GINAHGYVCDVT 93 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHH--------------HHHHHHT---TCCCEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH--------------HHHHHhc---CCeEEEEEecCC
Confidence 5799999999999999999885 5788765 34431 111110 0111110 01222 346888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 94 d~~~v~~~~~~~~~~~g~iD~lvnnAg 120 (291)
T 3cxt_A 94 DEDGIQAMVAQIESEVGIIDILVNNAG 120 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 888887777665543 4888887655
No 476
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=91.14 E-value=1.6 Score=37.83 Aligned_cols=81 Identities=19% Similarity=0.188 Sum_probs=51.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
..+.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+.. +++ . ..+. +..|.+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~-~-----~~~~~~~~Dv~ 63 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQ-EGATVLG-LDLKP--PAGEEPA--------------AEL-G-----AAVRFRNADVT 63 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEE-EESSC--C--------------------------------CEEEECCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EeCCh--HHHHHHH--------------HHh-C-----CceEEEEccCC
Confidence 4689999999999999999885 5788665 44432 1111110 011 1 1222 346888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+=..|.
T Consensus 64 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 64 NEADATAALAFAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 888888887777665 78999876653
No 477
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=91.13 E-value=1.9 Score=38.06 Aligned_cols=84 Identities=17% Similarity=0.202 Sum_probs=52.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
..+.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+. .+++-+. ...+. +..|.+
T Consensus 25 k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~--------------~~~l~~~---~~~~~~~~~Dv~ 83 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAA-RGIAVYG-CARDA--KNVSAA--------------VDGLRAA---GHDVDGSSCDVT 83 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHH--------------HHHHHTT---TCCEEEEECCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH--------------HHHHHhc---CCcEEEEECCCC
Confidence 4699999999999999999885 5888764 44431 111111 0111110 01222 345888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++.+.+.+..+.+. ++.+|+-..|.
T Consensus 84 d~~~v~~~~~~~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 84 STDEVHAAVAAAVERFGPIGILVNSAGR 111 (279)
T ss_dssp CHHHHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 898888888777665 68888876653
No 478
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=91.09 E-value=1.2 Score=37.92 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=50.4
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCc-cEEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-AVVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-DVVIDf 113 (300)
..+|.|.|++|.+|+.+++.+.+ .+.+++.. +++. ... +++.+++ ... -+..|.
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~------------------~~~~~~~---~~~~~~~~D~ 59 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHA-KGYRVGLM-ARDE--KRL------------------QALAAEL---EGALPLPGDV 59 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHH------------------HHHHHHS---TTCEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEE-ECCH--HHH------------------HHHHHHh---hhceEEEecC
Confidence 45799999999999999999885 57887653 4321 111 1111100 112 234578
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
+.++...+.+..+.+. ++.+|+-..|
T Consensus 60 ~~~~~~~~~~~~~~~~~~~id~li~~Ag 87 (234)
T 2ehd_A 60 REEGDWARAVAAMEEAFGELSALVNNAG 87 (234)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 8888777766655443 6888887665
No 479
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.09 E-value=0.22 Score=48.85 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=43.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEEEcC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVIDfT 114 (300)
-.+|+|+|+ |.||+.+++.+.. -+++++ ++|++. .... .+ ...|+. +.++++++. .+|+||+++
T Consensus 274 GktV~IiG~-G~IG~~~A~~lka-~Ga~Vi-v~d~~~--~~~~-~A---~~~Ga~-~~~l~e~l~------~aDvVi~at 337 (494)
T 3ce6_A 274 GKKVLICGY-GDVGKGCAEAMKG-QGARVS-VTEIDP--INAL-QA---MMEGFD-VVTVEEAIG------DADIVVTAT 337 (494)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHH-HH---HHTTCE-ECCHHHHGG------GCSEEEECS
T ss_pred cCEEEEEcc-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHH-HH---HHcCCE-EecHHHHHh------CCCEEEECC
Confidence 368999998 9999999998875 477765 466532 1111 11 123443 346777763 789999987
Q ss_pred Cch
Q 022250 115 DAS 117 (300)
Q Consensus 115 ~p~ 117 (300)
...
T Consensus 338 gt~ 340 (494)
T 3ce6_A 338 GNK 340 (494)
T ss_dssp SSS
T ss_pred CCH
Confidence 433
No 480
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.07 E-value=0.2 Score=45.84 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=25.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (300)
|||+|+|+ |++|+.++-.+...+-+ || ..+|..
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el-~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEI-ALVDIA 34 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEE-EEECSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEE-EEEeCC
Confidence 79999997 99999999888766554 44 467753
No 481
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=91.04 E-value=1.7 Score=38.15 Aligned_cols=85 Identities=20% Similarity=0.208 Sum_probs=52.2
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
..+.|.|++|.+|+.+++.+.+ .+..++.....+. ....++ .+.+.+ ....+. +..|.+
T Consensus 29 k~vlVTGas~gIG~aia~~la~-~G~~V~~~~~~~~--~~~~~~---------------~~~~~~--~~~~~~~~~~D~~ 88 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAA-AGAKVAVNYASSA--GAADEV---------------VAAIAA--AGGEAFAVKADVS 88 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHH--TTCCEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCCh--HHHHHH---------------HHHHHh--cCCcEEEEECCCC
Confidence 4588999999999999999885 5788765433221 111111 111110 001222 346888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 89 d~~~v~~~~~~~~~~~g~id~lv~nAg~ 116 (269)
T 4dmm_A 89 QESEVEALFAAVIERWGRLDVLVNNAGI 116 (269)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 888888877766665 78998876653
No 482
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.02 E-value=0.26 Score=45.79 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=26.8
Q ss_pred CCCCcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecC
Q 022250 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (300)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (300)
+...++||+|+|+ |.||..++..+....-. +|+ .+|.+
T Consensus 15 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~-L~Di~ 53 (331)
T 4aj2_A 15 EQVPQNKITVVGV-GAVGMACAISILMKDLADELA-LVDVI 53 (331)
T ss_dssp --CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSC
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEeCC
Confidence 3344689999998 99999999888765332 544 57753
No 483
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=91.00 E-value=0.9 Score=38.90 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=50.8
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEc
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDf 113 (300)
+.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....++. +++..+ ...+.. +..|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~--~~~~~~~~~~D~ 61 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLA-RGDRVAA-LDLSA--ETLEETA--------------RTHWHA--YADKVLRVRADV 61 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHSTT--TGGGEEEEECCT
T ss_pred CCEEEEeCCCchHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHHh--cCCcEEEEEecC
Confidence 35789999999999999999886 4677665 44431 1111110 011000 001122 34578
Q ss_pred CCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 114 T~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
+.++...+.+..+.+. ++.+|+-..|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~id~li~~Ag 89 (250)
T 2cfc_A 62 ADEGDVNAAIAATMEQFGAIDVLVNNAG 89 (250)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 8888777776655543 6888887665
No 484
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=90.96 E-value=2 Score=37.81 Aligned_cols=87 Identities=15% Similarity=0.162 Sum_probs=51.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+.. +++-+.-.....+. +..|.+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~~~~~~~~~~~~~Dv~ 73 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVA-AGASVMI-VGRNP--DKLAGAV--------------QELEALGANGGAIRYEPTDIT 73 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHTTCCSSCEEEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHHhCCCCceEEEEeCCCC
Confidence 4699999999999999999885 5788664 45432 1111110 11110000000122 245888
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG~ 140 (300)
.++...+.+..+.+. ++++|+-..|.
T Consensus 74 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 74 NEDETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 888888877776654 68888866553
No 485
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=90.96 E-value=0.66 Score=44.66 Aligned_cols=33 Identities=24% Similarity=0.345 Sum_probs=26.2
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
..||.|+|+ |.+|..+++.+.. .++.=+.++|.
T Consensus 40 ~~~VlvvG~-GGlGs~va~~La~-aGvg~i~ivD~ 72 (434)
T 1tt5_B 40 TCKVLVIGA-GGLGCELLKNLAL-SGFRQIHVIDM 72 (434)
T ss_dssp TCCEEEECS-STHHHHHHHHHHH-TTCCCEEEEEC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-cCCCEEEEEcC
Confidence 368999998 9999999999875 46655566773
No 486
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=90.95 E-value=0.19 Score=41.96 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=27.3
Q ss_pred CcceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEE
Q 022250 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAI 67 (300)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~v 67 (300)
|++||.|.|++|.+|+.+++.+.+.... +++++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 5579999999999999999999875432 777643
No 487
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.93 E-value=0.13 Score=47.74 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=26.1
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecC
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (300)
++||+|+|+ |.||..++..+...+-+ +|+ .+|.+
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~-l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELV-VIDVN 39 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEecc
Confidence 479999997 99999999988765433 554 56753
No 488
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=90.90 E-value=0.4 Score=41.45 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=27.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (300)
+.++.|.|++|.+|+.+++.+.+..+..++. +++
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~-~~~ 37 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVIN-IDI 37 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEE-EES
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEE-ecc
Confidence 4679999999999999999988756776654 454
No 489
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=90.89 E-value=2.8 Score=37.98 Aligned_cols=86 Identities=22% Similarity=0.217 Sum_probs=53.0
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCC----CCcchhhhhcCcCCCCcceecCHHHHHhcccccCCccEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~----~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVVI 111 (300)
..+.|.|++|.+|+.+++.+.+ .+.+++.. |... .+++.... ..-.+++.+ ....++.
T Consensus 10 k~~lVTGas~GIG~~~a~~La~-~Ga~Vv~~-~~~~~~~~~~R~~~~~-----------~~~~~~l~~-----~~~~~~~ 71 (319)
T 1gz6_A 10 RVVLVTGAGGGLGRAYALAFAE-RGALVVVN-DLGGDFKGVGKGSSAA-----------DKVVEEIRR-----RGGKAVA 71 (319)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEE-CCCBCTTSCBCCSHHH-----------HHHHHHHHH-----TTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE-cCCcccccccCCHHHH-----------HHHHHHHHh-----hCCeEEE
Confidence 5689999999999999999885 57877653 3210 01111000 000112211 2345678
Q ss_pred EcCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 112 DFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 112 DfT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
|.+.++.....+..+.+. ++++||-.-|
T Consensus 72 D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG 101 (319)
T 1gz6_A 72 NYDSVEAGEKLVKTALDTFGRIDVVVNNAG 101 (319)
T ss_dssp ECCCGGGHHHHHHHHHHHTSCCCEEEECCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 999998877777666554 5888887654
No 490
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=90.86 E-value=0.44 Score=46.25 Aligned_cols=137 Identities=8% Similarity=0.072 Sum_probs=86.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEec-----CCCCcchhhhhcC---c-------CC-----CCcceecCHH
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-----HSVGEDIGMVCDM---E-------QP-----LEIPVMSDLT 95 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-----~~~g~d~~~~~g~---~-------~~-----~gv~v~~dl~ 95 (300)
.+|+|.|. |++|+..++.+.+ .+.++|++.|+ ++.|-|..++.-+ . .. .+.... +.+
T Consensus 240 ~~VaVQG~-GnVG~~aa~~L~e-~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v-~~~ 316 (456)
T 3r3j_A 240 KKCLVSGS-GNVAQYLVEKLIE-KGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF-ENQ 316 (456)
T ss_dssp CCEEEECC-SHHHHHHHHHHHH-HTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE-CSC
T ss_pred CEEEEECC-CHHHHHHHHHHHH-CCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe-CCc
Confidence 68999997 9999999998765 58899998884 3445554433200 0 00 122222 224
Q ss_pred HHHhcccccCCccEEEEcCCchhH-HHHHHHHHHcCCCEEEeCC-C-CCHHHHHHHHHHhhhCCCeEEEcCCCcH---HH
Q 022250 96 MVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP-H-IQLETVSALSAFCDKASMGCLIAPTLSI---GS 169 (300)
Q Consensus 96 ~~l~~~~~~~~~DVVIDfT~p~~~-~~~~~~al~~G~~vVigTT-G-~~~e~~~~L~~~a~~~~i~iv~a~N~Si---Gv 169 (300)
+++. .++||.+=+...... .+++....+++..+|+|-- + .+++..+ . -+++ .+++.|-+.. ||
T Consensus 317 ~i~~-----~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~---i-L~~r--GI~~~PD~~aNAGGV 385 (456)
T 3r3j_A 317 KPWN-----IPCDIAFPCATQNEINENDADLFIQNKCKMIVEGANMPTHIKALH---K-LKQN--NIILCPSKAANAGGV 385 (456)
T ss_dssp CGGG-----SCCSEEEECSCTTCBCHHHHHHHHHHTCCEEECCSSSCBCTTHHH---H-HHTT--TCEEECHHHHTTHHH
T ss_pred cccc-----cCccEEEeCCCccchhhHHHHHHHhcCCeEEEecCCCCCCHHHHH---H-HHHC--CCEEeChHHhcCCce
Confidence 5664 689999988765554 7788888888999999965 2 4544322 2 2343 4577787654 33
Q ss_pred HH-HHHHHHHhccCCCCe
Q 022250 170 IL-LQQAAISASFHYKNV 186 (300)
Q Consensus 170 ~l-l~~~a~~~~~~~~di 186 (300)
.. -.+..+....++|+-
T Consensus 386 ~vS~~E~~qn~~~~~w~~ 403 (456)
T 3r3j_A 386 AVSGLEMSQNSMRLQWTH 403 (456)
T ss_dssp HHHHHHHHHHHHTCCCCH
T ss_pred eeehHHHhhcccccCCCH
Confidence 22 145566666666754
No 491
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=90.86 E-value=0.85 Score=45.83 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=27.3
Q ss_pred cceEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
+++|.|.|++|.+|+.+++.+.+ .+.+++++.
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~-~G~~V~~~~ 42 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIE-NGYDCVVAD 42 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CcCEEEEEE
Confidence 47899999999999999999886 478888754
No 492
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=90.81 E-value=1.2 Score=40.73 Aligned_cols=30 Identities=3% Similarity=0.178 Sum_probs=23.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhcCCcEEEEEE
Q 022250 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (300)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (300)
.|.|+|++|.+|...++.+.. .+.++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~-~Ga~Vi~~~ 196 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKE-EGFRPIVTV 196 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-HTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCEEEEEe
Confidence 466776679999999997764 477887654
No 493
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=90.75 E-value=1.9 Score=37.44 Aligned_cols=80 Identities=25% Similarity=0.272 Sum_probs=50.5
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ... +++.+++ ..... +..|.+
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~------------------~~~~~~~--~~~~~~~~~D~~ 68 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDK-AGATVAI-ADLDV--MAA------------------QAVVAGL--ENGGFAVEVDVT 68 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHH------------------HHHHHTC--TTCCEEEECCTT
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEE-EeCCH--HHH------------------HHHHHHH--hcCCeEEEEeCC
Confidence 5799999999999999999885 5788765 34431 111 1111100 01122 346788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 69 d~~~v~~~~~~~~~~~g~iD~lv~~Ag 95 (263)
T 3ak4_A 69 KRASVDAAMQKAIDALGGFDLLCANAG 95 (263)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888777766655544 6888887655
No 494
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=90.73 E-value=0.18 Score=45.74 Aligned_cols=126 Identities=14% Similarity=0.030 Sum_probs=65.3
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---c-CcCCCCccee--cCHHHHHhcccccCCccE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---D-MEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~---g-~~~~~gv~v~--~dl~~~l~~~~~~~~~DV 109 (300)
-++.|+|+ |++|+.++..+.+ .+.+=+-+++++. ..+.+++ + ......+..+ +++++.+. ++|+
T Consensus 128 k~vlVlGa-GG~g~aia~~L~~-~G~~~v~i~~R~~--~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~------~~Di 197 (283)
T 3jyo_A 128 DSVVQVGA-GGVGNAVAYALVT-HGVQKLQVADLDT--SRAQALADVINNAVGREAVVGVDARGIEDVIA------AADG 197 (283)
T ss_dssp SEEEEECC-SHHHHHHHHHHHH-TTCSEEEEECSSH--HHHHHHHHHHHHHHTSCCEEEECSTTHHHHHH------HSSE
T ss_pred CEEEEECC-cHHHHHHHHHHHH-CCCCEEEEEECCH--HHHHHHHHHHHhhcCCceEEEcCHHHHHHHHh------cCCE
Confidence 58999998 9999999998886 4663344566542 1222221 0 0001123233 37877774 6899
Q ss_pred EEEcCCchhHH----HHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEcCCCcHHHHHHHHHHHHh
Q 022250 110 VIDFTDASTVY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (300)
Q Consensus 110 VIDfT~p~~~~----~~~~~al~~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a~N~SiGv~ll~~~a~~~ 179 (300)
||..|+.-... ..-...+..+ .+|+-. -+++.+ -.+.+.|++.|.+++= .+++ |+.|++.++
T Consensus 198 VInaTp~Gm~~~~~~pi~~~~l~~~-~~v~Dl-vY~P~~-T~ll~~A~~~G~~~~~----Gl~M-Lv~Qa~~~f 263 (283)
T 3jyo_A 198 VVNATPMGMPAHPGTAFDVSCLTKD-HWVGDV-VYMPIE-TELLKAARALGCETLD----GTRM-AIHQAVDAF 263 (283)
T ss_dssp EEECSSTTSTTSCSCSSCGGGCCTT-CEEEEC-CCSSSS-CHHHHHHHHHTCCEEC----THHH-HHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCCHHHhCCC-CEEEEe-cCCCCC-CHHHHHHHHCcCeEeC----cHHH-HHHHHHHHH
Confidence 99888521110 0111222233 343321 122222 1255666777776552 4443 445555444
No 495
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.71 E-value=3.4 Score=35.72 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=51.4
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++. ++++. ....+. .+++-.. ..++. +..|.+
T Consensus 10 k~vlVTGas~giG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~--------------~~~~~~~---~~~~~~~~~D~~ 68 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELAS-LGASVYT-CSRNQ--KELNDC--------------LTQWRSK---GFKVEASVCDLS 68 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHH--------------HHHHHHT---TCEEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHH--------------HHHHHhc---CCcEEEEEcCCC
Confidence 5799999999999999999885 5788765 44431 111110 0111110 01122 345788
Q ss_pred CchhHHHHHHHHHHc---CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF---GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~---G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 69 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 69 SRSERQELMNTVANHFHGKLNILVNNAG 96 (260)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 888887777766553 5888887665
No 496
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.69 E-value=0.61 Score=43.77 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=50.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhcCcCCCCcc-e--e--cCHHHHHhcccccCCccE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIP-V--M--SDLTMVLGSISQSKARAV 109 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v--~--~dl~~~l~~~~~~~~~DV 109 (300)
-+|.|+|+ |.+|...++.+. .-+. ++++ ++.+. .. .+++ .++|.. + + .++.+.+.+......+|+
T Consensus 215 ~~VlV~Ga-G~vG~~aiqlak-~~Ga~~Vi~-~~~~~--~~-~~~~---~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 215 DNVVILGG-GPIGLAAVAILK-HAGASKVIL-SEPSE--VR-RNLA---KELGADHVIDPTKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCSEEEE-ECSCH--HH-HHHH---HHHTCSEEECTTTSCHHHHHHHHTTTCCCSE
T ss_pred CEEEEECC-CHHHHHHHHHHH-HcCCCEEEE-ECCCH--HH-HHHH---HHcCCCEEEcCCCCCHHHHHHHHhCCCCCCE
Confidence 46999998 999999999776 4577 6665 44321 11 1111 112211 1 1 233333322111235888
Q ss_pred EEEcCCch-hHHHHHHHHH-----HcCCCEEEeCC
Q 022250 110 VIDFTDAS-TVYDNVKQAT-----AFGMRSVVYVP 138 (300)
Q Consensus 110 VIDfT~p~-~~~~~~~~al-----~~G~~vVigTT 138 (300)
|+|++... ...+.+..++ ..|.=+++|.+
T Consensus 286 vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 286 FLEATGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp EEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred EEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 88887554 4555555554 34554556654
No 497
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.66 E-value=0.098 Score=47.57 Aligned_cols=123 Identities=13% Similarity=0.076 Sum_probs=66.1
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcc-e--ec--C-HHHHHhcccccCCccE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-V--MS--D-LTMVLGSISQSKARAV 109 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~-v--~~--d-l~~~l~~~~~~~~~DV 109 (300)
-+|.|+|++|.+|...++.++ ..+.++++...... . +++ .++|.. + +. + +.+.+ ..+|+
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~~~~~--~---~~~---~~lGa~~~i~~~~~~~~~~~~------~g~D~ 218 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAK-QKGTTVITTASKRN--H---AFL---KALGAEQCINYHEEDFLLAIS------TPVDA 218 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEECHHH--H---HHH---HHHTCSEEEETTTSCHHHHCC------SCEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEeccch--H---HHH---HHcCCCEEEeCCCcchhhhhc------cCCCE
Confidence 469999877999999999776 45888887653221 1 111 122322 1 22 2 33333 47999
Q ss_pred EEEcCCchhHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHHhhhCCCeEEEc-CCCcHHHHHHHHHHHHhcc
Q 022250 110 VIDFTDASTVYDNVKQATA-FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIA-PTLSIGSILLQQAAISASF 181 (300)
Q Consensus 110 VIDfT~p~~~~~~~~~al~-~G~~vVigTTG~~~e~~~~L~~~a~~~~i~iv~a-~N~SiGv~ll~~~a~~~~~ 181 (300)
++|++..+.. +.+..+++ .|.=+.+|.. .... .+. ....+++.+... .+.+ -..+.++.+.+..
T Consensus 219 v~d~~g~~~~-~~~~~~l~~~G~iv~~g~~--~~~~--~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~ 284 (321)
T 3tqh_A 219 VIDLVGGDVG-IQSIDCLKETGCIVSVPTI--TAGR--VIE-VAKQKHRRAFGLLKQFN--IEELHYLGKLVSE 284 (321)
T ss_dssp EEESSCHHHH-HHHGGGEEEEEEEEECCST--THHH--HHH-HHHHTTCEEECCCCCCC--HHHHHHHHHHHHT
T ss_pred EEECCCcHHH-HHHHHhccCCCEEEEeCCC--Cchh--hhh-hhhhcceEEEEEecCCC--HHHHHHHHHHHHC
Confidence 9999987666 44444444 4444444433 2222 122 223344655432 1222 2356666666654
No 498
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.61 E-value=1.2 Score=38.60 Aligned_cols=84 Identities=21% Similarity=0.239 Sum_probs=49.8
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc-EEEEcC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VVIDfT 114 (300)
.+|.|.|++|.+|+.+++.+.+ .+.+++.....+. ....++. +++-.. ..+.. +..|.+
T Consensus 22 k~vlItGasggiG~~la~~l~~-~G~~v~~~~r~~~--~~~~~~~--------------~~l~~~---~~~~~~~~~D~~ 81 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGR-RGASVVVNYGSSS--KAAEEVV--------------AELKKL---GAQGVAIQADIS 81 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCch--HHHHHHH--------------HHHHhc---CCcEEEEEecCC
Confidence 5799999999999999999886 4788776433121 1111100 111100 01122 345788
Q ss_pred CchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 115 ~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.++...+.+..+.+. ++++|+-..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 82 KPSEVVALFDKAVSHFGGLDFVMSNSG 108 (274)
T ss_dssp SHHHHHHHHHHHHHHHSCEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888777766655443 6788876654
No 499
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=90.59 E-value=2.9 Score=36.63 Aligned_cols=93 Identities=18% Similarity=0.335 Sum_probs=53.7
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCcCCCCcceecCHHHHHhcccccCCcc---EEEE
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~~~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VVID 112 (300)
.++.|.|++|.+|+.+++.+.+ .+.+++. ++++....... +.....+.++++.+.+. ..... +..|
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~-~G~~V~~-~~r~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D 79 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAE-AGADIAI-CDRCENSDVVG--------YPLATADDLAETVALVE-KTGRRCISAKVD 79 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EECCSCCTTCS--------SCCCCHHHHHHHHHHHH-HTTCCEEEEECC
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCeEEE-EeCCccccccc--------cccccHHHHHHHHHHHH-hcCCeEEEEeCC
Confidence 5799999999999999999885 5788664 45431000000 00000011112111000 01222 3458
Q ss_pred cCCchhHHHHHHHHHHc--CCCEEEeCCC
Q 022250 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (300)
Q Consensus 113 fT~p~~~~~~~~~al~~--G~~vVigTTG 139 (300)
.|.++...+.+..+.+. ++++++=..|
T Consensus 80 v~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (281)
T 3s55_A 80 VKDRAALESFVAEAEDTLGGIDIAITNAG 108 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 89998888888777665 7899987665
No 500
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.58 E-value=0.64 Score=42.24 Aligned_cols=32 Identities=28% Similarity=0.421 Sum_probs=24.9
Q ss_pred ceEEEEcCCchHHHHHHHHHHhcCCc--EEEEEEecC
Q 022250 36 IKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSH 70 (300)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~ 70 (300)
+||+|+|+ |.||..++..+... ++ +++ .+|.+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~-g~~~eV~-L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLR-GSCSELV-LVDRD 34 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEE-EECSS
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEE-EEeCC
Confidence 58999998 99999999888754 55 654 56754
Done!