Query 022251
Match_columns 300
No_of_seqs 342 out of 2218
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 09:10:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022251.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022251hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0722 Molecular chaperone (D 100.0 1.1E-69 2.3E-74 477.1 13.8 296 1-299 1-303 (329)
2 PTZ00341 Ring-infected erythro 99.9 2.2E-22 4.9E-27 205.2 17.0 195 26-254 566-767 (1136)
3 COG0484 DnaJ DnaJ-class molecu 99.9 2.3E-23 5E-28 196.2 8.7 72 32-103 3-75 (371)
4 KOG0713 Molecular chaperone (D 99.9 1.6E-22 3.4E-27 186.4 5.5 71 31-101 14-85 (336)
5 KOG0712 Molecular chaperone (D 99.8 1.1E-19 2.4E-24 169.3 6.7 69 31-101 2-70 (337)
6 PRK14288 chaperone protein Dna 99.8 2.5E-19 5.4E-24 171.6 6.7 69 32-100 2-71 (369)
7 PRK14296 chaperone protein Dna 99.8 3.4E-19 7.4E-24 170.8 6.7 69 32-100 3-71 (372)
8 PRK14279 chaperone protein Dna 99.7 2.4E-18 5.3E-23 166.0 6.1 68 32-99 8-76 (392)
9 PF00226 DnaJ: DnaJ domain; I 99.7 4.5E-18 9.8E-23 122.8 5.3 62 34-95 1-64 (64)
10 PRK14287 chaperone protein Dna 99.7 4.2E-18 9.2E-23 163.3 6.8 69 32-100 3-71 (371)
11 PRK14286 chaperone protein Dna 99.7 3.9E-18 8.5E-23 163.5 6.4 69 32-100 3-72 (372)
12 PRK14283 chaperone protein Dna 99.7 5.2E-18 1.1E-22 163.1 7.0 70 31-100 3-72 (378)
13 KOG0691 Molecular chaperone (D 99.7 5.4E-18 1.2E-22 156.3 6.6 86 32-117 4-92 (296)
14 PRK14276 chaperone protein Dna 99.7 5.3E-18 1.2E-22 163.1 6.9 69 32-100 3-71 (380)
15 PRK14298 chaperone protein Dna 99.7 6E-18 1.3E-22 162.5 6.7 69 32-100 4-72 (377)
16 PRK14291 chaperone protein Dna 99.7 8.5E-18 1.8E-22 161.8 6.9 69 32-100 2-70 (382)
17 PRK14299 chaperone protein Dna 99.7 8.8E-18 1.9E-22 156.2 6.5 69 32-100 3-71 (291)
18 PRK14278 chaperone protein Dna 99.7 1E-17 2.2E-22 161.0 6.5 67 33-99 3-69 (378)
19 PTZ00037 DnaJ_C chaperone prot 99.7 8.7E-18 1.9E-22 163.1 6.1 67 31-100 26-92 (421)
20 PRK14280 chaperone protein Dna 99.7 1.3E-17 2.8E-22 160.2 7.0 69 32-100 3-71 (376)
21 PRK14282 chaperone protein Dna 99.7 1.3E-17 2.8E-22 159.9 6.7 69 32-100 3-73 (369)
22 PRK14285 chaperone protein Dna 99.7 1.8E-17 3.9E-22 158.6 6.3 68 33-100 3-71 (365)
23 PRK14277 chaperone protein Dna 99.7 2.2E-17 4.8E-22 159.1 6.8 69 32-100 4-73 (386)
24 KOG0716 Molecular chaperone (D 99.7 2.3E-17 4.9E-22 148.0 5.9 68 32-99 30-98 (279)
25 PRK14294 chaperone protein Dna 99.7 2.8E-17 6E-22 157.4 6.6 69 32-100 3-72 (366)
26 KOG0721 Molecular chaperone (D 99.7 1.2E-16 2.6E-21 139.1 9.8 72 29-100 95-167 (230)
27 KOG0715 Molecular chaperone (D 99.7 3.8E-17 8.2E-22 151.3 6.8 70 32-101 42-111 (288)
28 PRK14301 chaperone protein Dna 99.7 3.3E-17 7.2E-22 157.2 6.4 69 32-100 3-72 (373)
29 PRK14295 chaperone protein Dna 99.7 3.9E-17 8.5E-22 157.5 6.6 65 32-96 8-73 (389)
30 PRK14297 chaperone protein Dna 99.7 3.7E-17 8.1E-22 157.3 6.2 68 33-100 4-72 (380)
31 PRK14284 chaperone protein Dna 99.7 4.5E-17 9.7E-22 157.2 6.6 68 33-100 1-69 (391)
32 KOG0717 Molecular chaperone (D 99.7 4E-17 8.6E-22 155.3 5.2 67 31-97 6-74 (508)
33 PRK10767 chaperone protein Dna 99.7 6.5E-17 1.4E-21 155.2 6.6 69 32-100 3-72 (371)
34 PRK14281 chaperone protein Dna 99.7 7.9E-17 1.7E-21 155.8 6.4 68 33-100 3-71 (397)
35 TIGR02349 DnaJ_bact chaperone 99.7 9.1E-17 2E-21 153.3 6.7 68 34-101 1-68 (354)
36 PRK14300 chaperone protein Dna 99.7 1E-16 2.3E-21 153.7 6.5 68 33-100 3-70 (372)
37 KOG0719 Molecular chaperone (D 99.7 7.2E-17 1.6E-21 141.7 4.7 88 29-116 10-103 (264)
38 PRK14293 chaperone protein Dna 99.6 1.6E-16 3.5E-21 152.5 6.9 68 33-100 3-70 (374)
39 PRK10266 curved DNA-binding pr 99.6 1.5E-16 3.3E-21 148.9 6.3 67 33-99 4-70 (306)
40 PRK14290 chaperone protein Dna 99.6 2E-16 4.4E-21 151.4 6.8 68 33-100 3-72 (365)
41 PRK14292 chaperone protein Dna 99.6 1.7E-16 3.8E-21 152.2 6.3 69 33-101 2-70 (371)
42 KOG0718 Molecular chaperone (D 99.6 1.4E-16 3.1E-21 151.6 5.5 72 31-102 7-82 (546)
43 PRK14289 chaperone protein Dna 99.6 3.4E-16 7.3E-21 151.0 6.7 69 32-100 4-73 (386)
44 smart00271 DnaJ DnaJ molecular 99.6 5.1E-16 1.1E-20 110.3 5.2 57 33-89 1-59 (60)
45 cd06257 DnaJ DnaJ domain or J- 99.6 1.3E-15 2.9E-20 106.2 5.6 54 34-87 1-55 (55)
46 PHA03102 Small T antigen; Revi 99.6 4.1E-15 9E-20 125.0 6.2 66 33-101 5-72 (153)
47 TIGR03835 termin_org_DnaJ term 99.5 8.9E-15 1.9E-19 147.2 7.1 69 33-101 2-70 (871)
48 COG2214 CbpA DnaJ-class molecu 99.5 1.9E-14 4.1E-19 125.9 6.3 68 30-97 3-72 (237)
49 KOG0624 dsRNA-activated protei 99.5 4E-14 8.7E-19 131.4 5.3 70 30-99 391-464 (504)
50 PRK05014 hscB co-chaperone Hsc 99.4 3.8E-13 8.2E-18 115.8 6.6 67 33-99 1-75 (171)
51 PRK01356 hscB co-chaperone Hsc 99.4 3.7E-13 8.1E-18 115.2 6.2 67 33-99 2-74 (166)
52 KOG0720 Molecular chaperone (D 99.4 3.1E-13 6.7E-18 129.0 5.1 69 32-100 234-302 (490)
53 PRK00294 hscB co-chaperone Hsc 99.4 1.3E-12 2.8E-17 112.6 6.9 69 31-99 2-78 (173)
54 PRK03578 hscB co-chaperone Hsc 99.3 3E-12 6.4E-17 110.7 6.8 68 32-99 5-80 (176)
55 COG5407 SEC63 Preprotein trans 99.3 2.9E-11 6.4E-16 115.2 10.3 73 27-99 92-170 (610)
56 KOG0550 Molecular chaperone (D 99.2 6E-12 1.3E-16 119.2 5.0 71 30-100 370-442 (486)
57 KOG0714 Molecular chaperone (D 99.2 6.2E-12 1.3E-16 115.0 4.8 69 32-100 2-72 (306)
58 PTZ00100 DnaJ chaperone protei 99.2 1.7E-11 3.8E-16 98.2 4.7 52 32-86 64-115 (116)
59 PRK09430 djlA Dna-J like membr 99.2 1.9E-11 4.1E-16 112.4 4.7 56 32-87 199-262 (267)
60 PHA02624 large T antigen; Prov 99.1 3.9E-11 8.4E-16 119.8 5.4 60 32-94 10-71 (647)
61 PRK01773 hscB co-chaperone Hsc 99.0 5.5E-10 1.2E-14 96.3 6.6 67 33-99 2-76 (173)
62 KOG1150 Predicted molecular ch 98.9 1.4E-09 3E-14 94.0 4.6 64 32-95 52-117 (250)
63 TIGR00714 hscB Fe-S protein as 98.9 3.8E-09 8.3E-14 89.8 6.0 55 45-99 3-63 (157)
64 COG5269 ZUO1 Ribosome-associat 98.8 1E-08 2.2E-13 92.4 5.6 89 24-112 34-131 (379)
65 KOG0568 Molecular chaperone (D 98.3 5.6E-07 1.2E-11 79.7 4.7 56 33-88 47-103 (342)
66 KOG0723 Molecular chaperone (D 98.1 4.7E-06 1E-10 65.2 4.5 48 38-88 61-108 (112)
67 KOG1789 Endocytosis protein RM 98.1 3.7E-06 8.1E-11 87.6 4.8 54 32-87 1280-1337(2235)
68 KOG3192 Mitochondrial J-type c 97.3 0.00028 6E-09 59.1 4.0 68 30-97 5-80 (168)
69 PTZ00475 RESA-like protein; Pr 96.4 0.0036 7.7E-08 57.5 3.8 117 119-253 3-123 (282)
70 KOG0431 Auxilin-like protein a 96.0 0.01 2.2E-07 58.7 5.5 49 36-84 391-447 (453)
71 COG1076 DjlA DnaJ-domain-conta 95.8 0.0046 9.9E-08 53.4 1.6 53 33-85 113-173 (174)
72 COG1076 DjlA DnaJ-domain-conta 95.3 0.013 2.9E-07 50.5 2.8 68 34-101 2-77 (174)
73 PF03656 Pam16: Pam16; InterP 93.5 0.11 2.5E-06 42.5 4.3 53 34-89 59-111 (127)
74 PF09320 DUF1977: Domain of un 92.0 0.093 2E-06 41.6 1.8 59 231-289 15-77 (107)
75 PF14308 DnaJ-X: X-domain of D 91.2 0.27 5.9E-06 43.4 4.1 70 181-260 4-76 (204)
76 PF13446 RPT: A repeated domai 77.0 4.4 9.6E-05 28.5 4.0 27 33-59 5-31 (62)
77 KOG0724 Zuotin and related mol 73.7 2.9 6.4E-05 39.5 3.0 53 44-96 3-60 (335)
78 PF11833 DUF3353: Protein of u 67.3 11 0.00025 33.0 5.1 40 42-88 1-40 (194)
79 PF14687 DUF4460: Domain of un 59.6 16 0.00035 29.2 4.2 47 43-89 4-55 (112)
80 COG5552 Uncharacterized conser 45.9 59 0.0013 24.1 4.9 44 34-77 4-47 (88)
81 PF12725 DUF3810: Protein of u 39.0 63 0.0014 30.6 5.4 74 16-89 65-150 (318)
82 PF10041 DUF2277: Uncharacteri 38.7 1.2E+02 0.0027 22.5 5.6 43 34-76 4-46 (78)
83 KOG4434 Molecular chaperone SE 36.3 20 0.00044 34.6 1.6 68 184-263 40-108 (520)
84 CHL00185 ycf59 magnesium-proto 35.4 81 0.0017 30.1 5.3 70 17-86 234-305 (351)
85 PF07709 SRR: Seven Residue Re 34.6 29 0.00062 17.1 1.2 13 74-86 2-14 (14)
86 KOG3442 Uncharacterized conser 33.5 53 0.0012 26.8 3.3 33 36-68 62-94 (132)
87 cd01047 ACSF Aerobic Cyclase S 32.4 1.1E+02 0.0025 28.8 5.7 71 16-86 217-289 (323)
88 TIGR02029 AcsF magnesium-proto 30.0 1.2E+02 0.0025 28.9 5.4 71 16-86 227-299 (337)
89 PF07739 TipAS: TipAS antibiot 26.6 1.4E+02 0.003 23.0 4.7 49 40-96 51-100 (118)
90 PLN02508 magnesium-protoporphy 26.3 1.5E+02 0.0032 28.3 5.4 70 16-85 233-304 (357)
91 PF15240 Pro-rich: Proline-ric 25.1 52 0.0011 28.6 2.1 32 11-43 2-33 (179)
92 PF08252 Leader_CPA1: arg-2/CP 24.8 58 0.0013 18.5 1.5 15 270-284 9-23 (24)
93 PRK13654 magnesium-protoporphy 21.0 1.8E+02 0.0038 28.0 4.8 71 16-86 237-309 (355)
No 1
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-69 Score=477.11 Aligned_cols=296 Identities=45% Similarity=0.821 Sum_probs=269.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHH
Q 022251 1 MAPPTVIRWYAITSAIVLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIAN 80 (300)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~ 80 (300)
|||+...||+.+++++...+++....++||+.+|||+||||+++++.++|.+|||+||+++|||+++++++.+.|..|.+
T Consensus 1 ~A~aat~rw~Lvl~~Llp~l~vgl~egLYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAt 80 (329)
T KOG0722|consen 1 MAPAATERWCLVLILLLPSLFVGLSEGLYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIAT 80 (329)
T ss_pred CCCccchHHHHHHHHHHHHHHHhhhhhhcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhc
Confidence 78999999999999999888888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccchhHHHhhcccccCCcccccccccccccccCCCCChhHHHHHHHHHhhhhhhhhHhHhHHHHHHHhhcCHHHHH
Q 022251 81 AYEILKDEATREQYDYAIAHPEEVFYNAARYYHAYYGHKTDPRAVLVGLLLIFSGFQYLNQWTRYNQAVAMVKKTPAYRN 160 (300)
Q Consensus 81 Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~s~~~y~~~~~~y~~~~~~~~~~~~~r~ 160 (300)
||++|.|...|..||..+++|+..++|++.||+.++++++|++.|++|+++++|.|||++.+++|.++|.+++.+|+|+|
T Consensus 81 ayeilkd~e~rt~ydyaldhpd~~fynyyqyyr~r~apkvd~raviVGvl~i~s~Fqyls~~ary~eAI~~~~~vpkyrN 160 (329)
T KOG0722|consen 81 AYEILKDNETRTQYDYALDHPDEVFYNYYQYYRARYAPKVDPRAVIVGVLVILSAFQYLSNVARYNEAIAYVKRVPKYRN 160 (329)
T ss_pred ccccccchhhHHhHHHHhcCchHHHHHHHHHHHHHhccccCCcEEEEeehhhhhHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-------HHHhcCCCCCcccchhhhhhhhhHhHHHHHHHHhhcCCCCchhhHHHHHHHhhhHHHHHHHHHHhhhh
Q 022251 161 KLRAL-------ELERSGGIPNKKKSNKQMDKKTGEDLSKELDLQIKGAEKPSVWELIGVRLILLPYTIGKLLLWWGRWY 233 (300)
Q Consensus 161 ~~~~~-------~~e~~~~~~~~~k~k~~~~~~~~e~l~~~l~~~i~g~~kP~~~dll~vql~l~pysl~~~l~w~~~w~ 233 (300)
.+-+. +.++.+ ++++++....++...+.+.+++++. ||+.+|+++|+|+|+++++||+|.++|.|+..|+
T Consensus 161 ~~l~~~~de~~lem~r~G--knkk~k~~q~Devik~ii~~~lDv~-gGy~kpsiwd~L~v~~Ii~PyTI~~~ivW~a~W~ 237 (329)
T KOG0722|consen 161 QALKAARDEILLEMDRNG--KNKKNKGVQNDEVIKQIIIDNLDVT-GGYKKPSIWDTLAVHTIIFPYTIFRYIVWTALWY 237 (329)
T ss_pred hhhhccchhHHHHHHhcc--ccccccCccHHHHHHHHHHhhcccc-cCcCCccHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 65332 234432 3333333333333444445555555 7999999999999999999999999999999999
Q ss_pred eeeeecCCCCchhhhHHHhhhcCCCCHHHHhhhChhHHHHHHHhhhhhhhhHHHHHHHHHHhhhhc
Q 022251 234 WRYNVKKASYAWEDALYLTQKSLRVPHDAWMNIDESKKEDLVNRRLWEKSNLESYLAEMRKESKRR 299 (300)
Q Consensus 234 ~ky~i~k~~~~~e~~~Yl~r~~l~~~~~~~~~l~~~~~~~~~~~~lW~~~n~~~~~~e~~~e~k~~ 299 (300)
|+|+|+|+||++++++||||+++|+||.+|++-+|++.+|+++.+||.+.|+..||+||+|+|+++
T Consensus 238 WRy~v~K~pY~~e~klYLiRr~lgv~q~~f~~~~d~~i~~~~~~~~W~~~n~~~wkaeq~e~~~~k 303 (329)
T KOG0722|consen 238 WRYAVQKEPYDDEAKLYLIRRYLGVSQMEFDQKTDEDIDDLFERECWLKLNCATWKAEQDEAEQEK 303 (329)
T ss_pred HhhhhhcCCCChHhHHHHHHHHhcchhhhhhhcchhhhhhHHHHHHHHhcCchhhhccCcHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999874
No 2
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.89 E-value=2.2e-22 Score=205.23 Aligned_cols=195 Identities=20% Similarity=0.151 Sum_probs=132.8
Q ss_pred ccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCCcccc
Q 022251 26 VAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHPEEVF 105 (300)
Q Consensus 26 ~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~ 105 (300)
...++.+++||+||||+++||..+||+|||+||+++|||+++++.|.++|+.|++||+|||||.+|+.||.+|..+....
T Consensus 566 ~t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~ 645 (1136)
T PTZ00341 566 PTIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGV 645 (1136)
T ss_pred ccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCC
Confidence 35667789999999999999999999999999999999999977788999999999999999999999999876543211
Q ss_pred cccccccccccCCCCChhHHHHHHHHHhhhhhhhhHhHhHHHHHHHhhc-----CH-HHHHHHHHHHHHhcCCCCCcccc
Q 022251 106 YNAARYYHAYYGHKTDPRAVLVGLLLIFSGFQYLNQWTRYNQAVAMVKK-----TP-AYRNKLRALELERSGGIPNKKKS 179 (300)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~s~~~y~~~~~~y~~~~~~~~~-----~~-~~r~~~~~~~~e~~~~~~~~~k~ 179 (300)
..+||..+| .+|+.-.+..|++.....+-+...+.. .. ..+..+ .. ..++.
T Consensus 646 ------------~~iDP~~Ff-mlFgse~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l---~e-------~m~~~ 702 (1136)
T PTZ00341 646 ------------NFIHPSIFY-LLASLEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHL---LK-------FMEQY 702 (1136)
T ss_pred ------------CccCHHHHH-HHhhhHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHH---HH-------HHHHH
Confidence 235666544 334433333555543222211111100 01 111111 10 11223
Q ss_pred hhhhhhhhhHhHHHHHHHHhhcCCCCchhhHHHH-HHHhhhHHHHHHHHHHhhhheeeeecCCCCchhhhHHHhhh
Q 022251 180 NKQMDKKTGEDLSKELDLQIKGAEKPSVWELIGV-RLILLPYTIGKLLLWWGRWYWRYNVKKASYAWEDALYLTQK 254 (300)
Q Consensus 180 k~~~~~~~~e~l~~~l~~~i~g~~kP~~~dll~v-ql~l~pysl~~~l~w~~~w~~ky~i~k~~~~~e~~~Yl~r~ 254 (300)
|++++.+++..|++.|..++.|.. .|...+.- --.|.-.+++..|+.+|+|+|.. .++.||+..
T Consensus 703 QkeRE~kLA~~LkdRL~~YVdgd~--~w~~~~e~Ei~~L~~sSFG~~IL~tIGwiY~n---------~A~~fL~~~ 767 (1136)
T PTZ00341 703 QKEREAHISENLINILQPCIAGDR--KWDVPIIDKIEELKGSPFDIAIIDSIGWIFKH---------VAKSHLKKP 767 (1136)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHhccchHHHHHHHHHHHHH---------HHHHHHhcc
Confidence 556777888889999998885543 23222211 12346688888999999999997 888888874
No 3
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2.3e-23 Score=196.21 Aligned_cols=72 Identities=46% Similarity=0.743 Sum_probs=68.3
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhcccccCCcc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHPEE 103 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 103 (300)
.+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+|||||++|+.||+++..+..
T Consensus 3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~ 75 (371)
T COG0484 3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK 75 (371)
T ss_pred ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence 579999999999999999999999999999999999 789999999999999999999999999999876544
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=1.6e-22 Score=186.38 Aligned_cols=71 Identities=52% Similarity=0.841 Sum_probs=66.8
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
..+|||+||||+++||..|||+|||+||+++|||||| +|.|.+.|+.|+.||+|||||++|+.||.+|..+
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEeg 85 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEG 85 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhh
Confidence 3589999999999999999999999999999999999 5889999999999999999999999999988643
No 5
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.1e-19 Score=169.30 Aligned_cols=69 Identities=52% Similarity=0.807 Sum_probs=65.4
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
.++.+|+||||+++||.+|||+|||+||++||||||++ +.++|++|+.||+|||||++|+.||.++.++
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~ 70 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEG 70 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhh
Confidence 56889999999999999999999999999999999986 8899999999999999999999999988754
No 6
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=2.5e-19 Score=171.63 Aligned_cols=69 Identities=42% Similarity=0.679 Sum_probs=64.8
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|+.||.++..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~ 71 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKK 71 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccc
Confidence 369999999999999999999999999999999998 467899999999999999999999999998754
No 7
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=3.4e-19 Score=170.78 Aligned_cols=69 Identities=42% Similarity=0.693 Sum_probs=65.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+|||||++|+.||.++..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 469999999999999999999999999999999999888999999999999999999999999998753
No 8
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=2.4e-18 Score=165.96 Aligned_cols=68 Identities=46% Similarity=0.735 Sum_probs=64.2
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+|||||++|+.||.++.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999998 45789999999999999999999999999864
No 9
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.73 E-value=4.5e-18 Score=122.77 Aligned_cols=62 Identities=47% Similarity=0.846 Sum_probs=59.4
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcc--hHHHHHHHHHhhhhccchhHHHhhc
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD--SRKLFVKIANAYEILKDEATREQYD 95 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~--a~~~f~~i~~Ay~vL~d~~~R~~YD 95 (300)
|||+||||+++++.++|+++|+++++.+|||+++... +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999998755 8899999999999999999999998
No 10
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=4.2e-18 Score=163.25 Aligned_cols=69 Identities=42% Similarity=0.714 Sum_probs=65.4
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~ 71 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHT 71 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCc
Confidence 369999999999999999999999999999999998778899999999999999999999999998754
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=3.9e-18 Score=163.52 Aligned_cols=69 Identities=49% Similarity=0.777 Sum_probs=64.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||.++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 72 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKA 72 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCch
Confidence 369999999999999999999999999999999998 467889999999999999999999999998754
No 12
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=5.2e-18 Score=163.05 Aligned_cols=70 Identities=41% Similarity=0.723 Sum_probs=66.2
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.+.|||+||||+++||.+|||+|||+||++||||+|+++.|.++|++|++||++|+||.+|+.||.++..
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~ 72 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHA 72 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccc
Confidence 3579999999999999999999999999999999998888999999999999999999999999997754
No 13
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=5.4e-18 Score=156.30 Aligned_cols=86 Identities=43% Similarity=0.745 Sum_probs=73.7
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchHHHHHHHHHhhhhccchhHHHhhcccccCCccc--cccc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP-DPDSRKLFVKIANAYEILKDEATREQYDYAIAHPEEV--FYNA 108 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~--~~~~ 108 (300)
..|||+||||+++|+..+|++|||+.|+++|||||| +|.|.++|+.|.+||+||+|+..|..||..+..+... ....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~~d~ 83 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGREDQ 83 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhhhhH
Confidence 689999999999999999999999999999999999 5889999999999999999999999999988754332 2344
Q ss_pred ccccccccC
Q 022251 109 ARYYHAYYG 117 (300)
Q Consensus 109 ~~~~~~~~~ 117 (300)
..+|+..|+
T Consensus 84 ~~~~r~~f~ 92 (296)
T KOG0691|consen 84 ADGFRKKFG 92 (296)
T ss_pred HHHHHHHhh
Confidence 445555544
No 14
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=5.3e-18 Score=163.07 Aligned_cols=69 Identities=46% Similarity=0.717 Sum_probs=65.7
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+++.|.++|+.|++||++|+||.+|+.||.++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 71 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAA 71 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCc
Confidence 479999999999999999999999999999999999888999999999999999999999999998754
No 15
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=6e-18 Score=162.49 Aligned_cols=69 Identities=46% Similarity=0.803 Sum_probs=65.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 72 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHA 72 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCcc
Confidence 469999999999999999999999999999999998888899999999999999999999999998754
No 16
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=8.5e-18 Score=161.79 Aligned_cols=69 Identities=45% Similarity=0.751 Sum_probs=65.7
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.++||+|||+||++||||+|+++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~ 70 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHA 70 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhccc
Confidence 369999999999999999999999999999999999888999999999999999999999999998764
No 17
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=8.8e-18 Score=156.19 Aligned_cols=69 Identities=43% Similarity=0.682 Sum_probs=65.5
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||+++|||+|+++.+.++|+.|++||++|+||.+|..||.++..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~ 71 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTT 71 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCc
Confidence 369999999999999999999999999999999998888999999999999999999999999998764
No 18
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.71 E-value=1e-17 Score=161.03 Aligned_cols=67 Identities=46% Similarity=0.722 Sum_probs=64.4
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.|||+||||+++||.+|||+|||+||++||||+|+++.|.++|+.|++||+||+||.+|..||.++.
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~ 69 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD 69 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCC
Confidence 6999999999999999999999999999999999987889999999999999999999999999775
No 19
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.71 E-value=8.7e-18 Score=163.08 Aligned_cols=67 Identities=43% Similarity=0.691 Sum_probs=62.3
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
...|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||.+|+.||.++..
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~ 92 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEE 92 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcch
Confidence 35799999999999999999999999999999999863 58999999999999999999999998754
No 20
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.3e-17 Score=160.24 Aligned_cols=69 Identities=48% Similarity=0.738 Sum_probs=65.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.++||+|||+||++||||+|+++.|.++|++|++||++|+||.+|+.||.++..
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 71 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHA 71 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCcc
Confidence 369999999999999999999999999999999999888999999999999999999999999998754
No 21
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.70 E-value=1.3e-17 Score=159.88 Aligned_cols=69 Identities=41% Similarity=0.723 Sum_probs=64.2
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||+|+. +.|.++|++|++||++|+||.+|+.||.++..
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~ 73 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYV 73 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcc
Confidence 4699999999999999999999999999999999974 46889999999999999999999999998754
No 22
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=1.8e-17 Score=158.64 Aligned_cols=68 Identities=44% Similarity=0.763 Sum_probs=64.0
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.+|||+|||+||++||||+|++ +.|.++|++|++||++|+||.+|..||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~ 71 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHT 71 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcc
Confidence 699999999999999999999999999999999984 56889999999999999999999999998754
No 23
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.2e-17 Score=159.10 Aligned_cols=69 Identities=48% Similarity=0.768 Sum_probs=64.5
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+|..||.++..
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~ 73 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHA 73 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccc
Confidence 4699999999999999999999999999999999984 56889999999999999999999999998753
No 24
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=2.3e-17 Score=147.99 Aligned_cols=68 Identities=50% Similarity=0.770 Sum_probs=64.7
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
..|+|+|||++++|+.++|||+||+|++++|||++++ |++.++|+.|++||+||+||.+|..||.++.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~ 98 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGE 98 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence 4579999999999999999999999999999999996 8899999999999999999999999999865
No 25
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.69 E-value=2.8e-17 Score=157.44 Aligned_cols=69 Identities=45% Similarity=0.799 Sum_probs=64.7
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.+|||+|||+||++||||++++ +.+.++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~ 72 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHE 72 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccc
Confidence 4799999999999999999999999999999999984 66889999999999999999999999998764
No 26
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=1.2e-16 Score=139.12 Aligned_cols=72 Identities=40% Similarity=0.657 Sum_probs=65.4
Q ss_pred cCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 29 YCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 29 ~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
....-|+|+||||++++|.+|||+|||+|+.++||||+++ ++.++.|..|++||+.|+|+..|+.|..++..
T Consensus 95 ~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P 167 (230)
T KOG0721|consen 95 ERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP 167 (230)
T ss_pred HhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence 4456799999999999999999999999999999999997 55677799999999999999999999988753
No 27
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=3.8e-17 Score=151.34 Aligned_cols=70 Identities=50% Similarity=0.760 Sum_probs=66.4
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
..|||+||||+++|+..|||+||++||++||||.|.+++|.++|++|.+||++|+|+++|..||..+..+
T Consensus 42 ~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3499999999999999999999999999999999999999999999999999999999999999877643
No 28
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.3e-17 Score=157.19 Aligned_cols=69 Identities=49% Similarity=0.869 Sum_probs=64.4
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.++||+|||+||+++|||++++ +.|.++|+.|++||+||+||.+|+.||.++..
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~ 72 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHA 72 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccc
Confidence 4699999999999999999999999999999999984 56888999999999999999999999998754
No 29
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.9e-17 Score=157.48 Aligned_cols=65 Identities=46% Similarity=0.814 Sum_probs=61.8
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDY 96 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 96 (300)
..|||+||||+++||.+|||+|||+||++||||++++ +.|+++|+.|++||+||+||.+|+.||.
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~ 73 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDE 73 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHH
Confidence 4699999999999999999999999999999999984 5688999999999999999999999997
No 30
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=3.7e-17 Score=157.27 Aligned_cols=68 Identities=41% Similarity=0.728 Sum_probs=64.1
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.++||+|||+||++||||++++ +.|+++|+.|++||++|+||.+|+.||.++..
T Consensus 4 ~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~ 72 (380)
T PRK14297 4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTA 72 (380)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcc
Confidence 699999999999999999999999999999999984 56889999999999999999999999998754
No 31
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.68 E-value=4.5e-17 Score=157.25 Aligned_cols=68 Identities=50% Similarity=0.811 Sum_probs=63.8
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.+|||+|||+||++||||+|++ +.|.++|+.|++||++|+||.+|+.||.++..
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~ 69 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKD 69 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 389999999999999999999999999999999984 56889999999999999999999999998754
No 32
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.67 E-value=4e-17 Score=155.26 Aligned_cols=67 Identities=46% Similarity=0.791 Sum_probs=62.7
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--cchHHHHHHHHHhhhhccchhHHHhhccc
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--PDSRKLFVKIANAYEILKDEATREQYDYA 97 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 97 (300)
..+.||+||||.++|+..+||++||+||++||||+||+ ++|+++|+.|+.||+|||||..|+.||..
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~h 74 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSH 74 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHH
Confidence 45679999999999999999999999999999999986 56899999999999999999999999963
No 33
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=6.5e-17 Score=155.16 Aligned_cols=69 Identities=48% Similarity=0.800 Sum_probs=64.3
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||+||||+++||.++||+|||+||++||||+|++ +.|.++|+.|++||++|+||.+|..||.++..
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 72 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHA 72 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccc
Confidence 4699999999999999999999999999999999984 56889999999999999999999999998754
No 34
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=7.9e-17 Score=155.77 Aligned_cols=68 Identities=49% Similarity=0.838 Sum_probs=63.9
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.++||+|||+||++||||++++ +.|.++|+.|++||++|+||.+|..||.++..
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~ 71 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHA 71 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccch
Confidence 699999999999999999999999999999999984 56889999999999999999999999998754
No 35
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.66 E-value=9.1e-17 Score=153.27 Aligned_cols=68 Identities=49% Similarity=0.769 Sum_probs=64.2
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
|||+||||+++||.++||+|||+||+++|||+++++.+.++|+.|++||++|+||.+|..||.++..+
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~ 68 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAG 68 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccccc
Confidence 79999999999999999999999999999999987778999999999999999999999999977543
No 36
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.66 E-value=1e-16 Score=153.74 Aligned_cols=68 Identities=44% Similarity=0.740 Sum_probs=64.6
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.+|||+|||++|++||||+++++.+.++|+.|++||++|+||.+|..||.++..
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 70 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD 70 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccc
Confidence 69999999999999999999999999999999998777899999999999999999999999997653
No 37
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=7.2e-17 Score=141.71 Aligned_cols=88 Identities=35% Similarity=0.619 Sum_probs=72.6
Q ss_pred cCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC---cchHHHHHHHHHhhhhccchhHHHhhcccccCC---c
Q 022251 29 YCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD---PDSRKLFVKIANAYEILKDEATREQYDYAIAHP---E 102 (300)
Q Consensus 29 ~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~---~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~---~ 102 (300)
+....|+|+||||.++|+..+|++||+++|+++|||+++. ..++++|++|+.||+||+|.++|+.||..+.-+ .
T Consensus 10 ~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~ 89 (264)
T KOG0719|consen 10 SFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESG 89 (264)
T ss_pred cccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccc
Confidence 4566799999999999999999999999999999999973 458899999999999999999999999887644 2
Q ss_pred cccccccccccccc
Q 022251 103 EVFYNAARYYHAYY 116 (300)
Q Consensus 103 ~~~~~~~~~~~~~~ 116 (300)
+...++-.+|+..|
T Consensus 90 d~~~~~~e~~~~iy 103 (264)
T KOG0719|consen 90 DIDEDWLEFWRAIY 103 (264)
T ss_pred hhhhHHHHHHHHHH
Confidence 23344444444443
No 38
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.6e-16 Score=152.54 Aligned_cols=68 Identities=44% Similarity=0.770 Sum_probs=64.9
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.++||+|||+|++++|||+++++.+.++|+.|++||++|+||.+|+.||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~ 70 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEA 70 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhcccc
Confidence 69999999999999999999999999999999999888999999999999999999999999997753
No 39
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.65 E-value=1.5e-16 Score=148.90 Aligned_cols=67 Identities=39% Similarity=0.713 Sum_probs=64.2
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.|||+||||+++||.++||+|||+||+++|||+++++.+.++|+.|++||++|+||.+|..||.++.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 5999999999999999999999999999999999888899999999999999999999999998764
No 40
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2e-16 Score=151.40 Aligned_cols=68 Identities=41% Similarity=0.726 Sum_probs=63.8
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
.|||+||||+++||.+|||+|||+|++++|||++++. .|.++|+.|++||++|+||.+|..||.++..
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~ 72 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTV 72 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCc
Confidence 5999999999999999999999999999999999853 5889999999999999999999999998754
No 41
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=1.7e-16 Score=152.23 Aligned_cols=69 Identities=46% Similarity=0.773 Sum_probs=65.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
.|||+||||+++||.++||+|||+||+++|||+++++.+.++|+.|++||++|+||.+|+.||.++..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 489999999999999999999999999999999998889999999999999999999999999987643
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1.4e-16 Score=151.63 Aligned_cols=72 Identities=42% Similarity=0.648 Sum_probs=65.9
Q ss_pred CccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc----chHHHHHHHHHhhhhccchhHHHhhcccccCCc
Q 022251 31 DEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP----DSRKLFVKIANAYEILKDEATREQYDYAIAHPE 102 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~----~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 102 (300)
++.|||.+|||+++||.+||++|||++++.+||||..++ .|++.|+.|..||||||||.+|..||.+|..+-
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL 82 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGL 82 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccc
Confidence 456999999999999999999999999999999999864 478899999999999999999999998877543
No 43
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.4e-16 Score=150.97 Aligned_cols=69 Identities=43% Similarity=0.736 Sum_probs=64.5
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|||++|||+++||.+||++|||+||+++|||++++ +.+.++|++|++||++|+||.+|+.||.++..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~ 73 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHA 73 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccc
Confidence 4799999999999999999999999999999999984 57899999999999999999999999997753
No 44
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.62 E-value=5.1e-16 Score=110.34 Aligned_cols=57 Identities=53% Similarity=0.909 Sum_probs=53.7
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhccchh
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEILKDEA 89 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL~d~~ 89 (300)
.|||+||||+++++.++|+++|+++++.+|||+++ .+.+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5678899999999999999985
No 45
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.60 E-value=1.3e-15 Score=106.18 Aligned_cols=54 Identities=61% Similarity=1.054 Sum_probs=51.6
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchHHHHHHHHHhhhhccc
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD-PDSRKLFVKIANAYEILKD 87 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d 87 (300)
|||+||||+++++.++|+++|+++++++|||++++ +.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999987 6788999999999999986
No 46
>PHA03102 Small T antigen; Reviewed
Probab=99.56 E-value=4.1e-15 Score=125.01 Aligned_cols=66 Identities=24% Similarity=0.437 Sum_probs=60.5
Q ss_pred cccccccCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 33 DDCYDLLGVSQNA--NSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 33 ~~~Y~iLgv~~~a--s~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
...|+||||+++| |.++||+|||++++++|||++++ .++|+.|++||++|+|+.+|..||.++...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 4679999999999 99999999999999999999753 579999999999999999999999987643
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.53 E-value=8.9e-15 Score=147.18 Aligned_cols=69 Identities=39% Similarity=0.715 Sum_probs=65.3
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
.|||+||||+++|+.++||+|||+|++++|||+++++.+.++|+.|++||++|+||.+|..||.++..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999998888899999999999999999999999987644
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.9e-14 Score=125.88 Aligned_cols=68 Identities=51% Similarity=0.810 Sum_probs=63.6
Q ss_pred CCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcc--hHHHHHHHHHhhhhccchhHHHhhccc
Q 022251 30 CDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD--SRKLFVKIANAYEILKDEATREQYDYA 97 (300)
Q Consensus 30 ~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~--a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 97 (300)
+...+||+||||+++|+..+|+++||++++++|||+++... +.+.|..|++||++|+|+..|..||..
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 45679999999999999999999999999999999999643 899999999999999999999999986
No 49
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.47 E-value=4e-14 Score=131.38 Aligned_cols=70 Identities=43% Similarity=0.685 Sum_probs=65.0
Q ss_pred CCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcc----hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 30 CDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD----SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 30 ~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~----a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.+.+|||.||||.++|+..||.||||++|.+||||-..+++ |+.+|.-|..|-+||+||++|+.+|.+-+
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeD 464 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGED 464 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCC
Confidence 46789999999999999999999999999999999998753 78889999999999999999999998655
No 50
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.40 E-value=3.8e-13 Score=115.81 Aligned_cols=67 Identities=24% Similarity=0.471 Sum_probs=58.7
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 33 DDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 33 ~~~Y~iLgv~~~--as~~eIkkayr~la~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.|||++|||+++ ++..+|+++||++++++|||++++.. +.+.|..|++||++|+||.+|..|+..+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 389999999996 67899999999999999999987432 45679999999999999999999986554
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.40 E-value=3.7e-13 Score=115.25 Aligned_cols=67 Identities=30% Similarity=0.583 Sum_probs=58.4
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCcc----hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 33 DDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDPD----SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 33 ~~~Y~iLgv~~~--as~~eIkkayr~la~~~HPDk~~~~~----a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.|||++|||+++ ++..+|+++||++++++|||++.++. +.+.+..|++||++|+||.+|..|+..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999997 68999999999999999999987532 23457899999999999999999987654
No 52
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=3.1e-13 Score=128.98 Aligned_cols=69 Identities=32% Similarity=0.600 Sum_probs=65.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|.|.+|||+.++|.++||+.||++|...|||||..+.|++.|+.|..||++|+|+++|..||..+..
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 579999999999999999999999999999999999999999999999999999999999999976553
No 53
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=1.3e-12 Score=112.57 Aligned_cols=69 Identities=20% Similarity=0.377 Sum_probs=60.8
Q ss_pred CccccccccCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 31 DEDDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 31 ~~~~~Y~iLgv~~~--as~~eIkkayr~la~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
+..|||++||+++. .+..+|+++||++++++|||++.+.. +.+.|..|++||++|+||.+|..|+..+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 46899999999998 46899999999999999999987532 45679999999999999999999997654
No 54
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.32 E-value=3e-12 Score=110.66 Aligned_cols=68 Identities=24% Similarity=0.494 Sum_probs=58.3
Q ss_pred ccccccccCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCc-c-----hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 32 EDDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDP-D-----SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 32 ~~~~Y~iLgv~~~--as~~eIkkayr~la~~~HPDk~~~~-~-----a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
..|||+||||+++ ++..+|+++||++++++|||+++.. . +.+.+..|++||++|+||.+|..|+..+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 4799999999996 5789999999999999999998742 2 23446899999999999999999996444
No 55
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.25 E-value=2.9e-11 Score=115.20 Aligned_cols=73 Identities=36% Similarity=0.599 Sum_probs=65.2
Q ss_pred cccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC------cchHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 27 AIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD------PDSRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 27 ~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~------~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
..+...-|+|+|||++.+++..+||++||+|+.++||||.++ ++-++.+..|++||+.|+|...|+.|-.+|.
T Consensus 92 ~~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGt 170 (610)
T COG5407 92 IEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGT 170 (610)
T ss_pred HHHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCC
Confidence 345566799999999999999999999999999999999885 2357889999999999999999999988764
No 56
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=6e-12 Score=119.19 Aligned_cols=71 Identities=41% Similarity=0.661 Sum_probs=65.1
Q ss_pred CCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--cchHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 30 CDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--PDSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 30 ~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
+...|+|.||||++.++..+|++|||++++.+|||++.. .+++.+|+.+.+||.+|+||.+|..||.+.+.
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 446799999999999999999999999999999999985 46888999999999999999999999987653
No 57
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=6.2e-12 Score=114.99 Aligned_cols=69 Identities=48% Similarity=0.797 Sum_probs=63.5
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chHHHHHHHHHhhhhccchhHHHhhcccccC
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDP--DSRKLFVKIANAYEILKDEATREQYDYAIAH 100 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 100 (300)
..|+|.||||.++|+.++|++||+++++++|||+++.+ .+..+|.++++||++|+||.+|..||.++..
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~ 72 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEE 72 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCcc
Confidence 36899999999999999999999999999999999876 5666899999999999999999999998863
No 58
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.19 E-value=1.7e-11 Score=98.19 Aligned_cols=52 Identities=29% Similarity=0.496 Sum_probs=47.5
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhcc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILK 86 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~ 86 (300)
..++|+||||++++|.++|+++||+|++++|||+++ +.+.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG---s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG---STYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHh
Confidence 358999999999999999999999999999999853 5678999999999985
No 59
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.17 E-value=1.9e-11 Score=112.41 Aligned_cols=56 Identities=39% Similarity=0.602 Sum_probs=50.8
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--------cchHHHHHHHHHhhhhccc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--------PDSRKLFVKIANAYEILKD 87 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--------~~a~~~f~~i~~Ay~vL~d 87 (300)
..++|+||||++++|.++||++||+|++++|||++.+ +.++++|+.|++||++|+.
T Consensus 199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999999743 2478899999999999985
No 60
>PHA02624 large T antigen; Provisional
Probab=99.14 E-value=3.9e-11 Score=119.80 Aligned_cols=60 Identities=27% Similarity=0.495 Sum_probs=56.4
Q ss_pred ccccccccCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhh
Q 022251 32 EDDCYDLLGVSQNA--NSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQY 94 (300)
Q Consensus 32 ~~~~Y~iLgv~~~a--s~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~Y 94 (300)
..++|++|||+++| +.++||+|||++|+++|||+++ +.++|+.|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG---deekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG---DEEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---cHHHHHHHHHHHHHHhcHHHhhhc
Confidence 46899999999999 9999999999999999999974 468999999999999999999999
No 61
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.02 E-value=5.5e-10 Score=96.27 Aligned_cols=67 Identities=19% Similarity=0.360 Sum_probs=58.5
Q ss_pred cccccccCcCCC--CCHHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 33 DDCYDLLGVSQN--ANSSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 33 ~~~Y~iLgv~~~--as~~eIkkayr~la~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.|||++||+++. .+...++++|+++.+.+|||+....+ +.+.-..||+||.+|+||-+|..|=-.+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 589999999997 68999999999999999999987543 34457899999999999999999976554
No 62
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=1.4e-09 Score=93.98 Aligned_cols=64 Identities=33% Similarity=0.598 Sum_probs=58.6
Q ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--cchHHHHHHHHHhhhhccchhHHHhhc
Q 022251 32 EDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--PDSRKLFVKIANAYEILKDEATREQYD 95 (300)
Q Consensus 32 ~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD 95 (300)
+-|+|+||.|.|+.+.++||+.||+|++..|||+|++ +.|..+|-.+.+||..|-|+..|..-+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 4689999999999999999999999999999999996 468889999999999999998776654
No 63
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.86 E-value=3.8e-09 Score=89.75 Aligned_cols=55 Identities=25% Similarity=0.447 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHhhCCCCCCCcc------hHHHHHHHHHhhhhccchhHHHhhccccc
Q 022251 45 ANSSEIKKAYYKLSLKYHPDKNPDPD------SRKLFVKIANAYEILKDEATREQYDYAIA 99 (300)
Q Consensus 45 as~~eIkkayr~la~~~HPDk~~~~~------a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 99 (300)
.+..+|+++||++++++|||++++.. +.+.|..|++||++|+||.+|..|+..+.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 47789999999999999999976432 56789999999999999999999997665
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1e-08 Score=92.40 Aligned_cols=89 Identities=33% Similarity=0.436 Sum_probs=71.1
Q ss_pred hhccccCCccccccccCcCC---CCCHHHHHHHHHHHHHhhCCCCCC---CcchHHHHHHHHHhhhhccchhHHHhhccc
Q 022251 24 PSVAIYCDEDDCYDLLGVSQ---NANSSEIKKAYYKLSLKYHPDKNP---DPDSRKLFVKIANAYEILKDEATREQYDYA 97 (300)
Q Consensus 24 ~~~~~~~~~~~~Y~iLgv~~---~as~~eIkkayr~la~~~HPDk~~---~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 97 (300)
.....-++..|.|.+||++. .++..+|.++.++.+.+||||+.. +.+..+.|..|+.||+||+|+..|..||.-
T Consensus 34 ~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 34 REDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 34455677899999999996 588999999999999999999984 346789999999999999999999999964
Q ss_pred cc---CCccccccccccc
Q 022251 98 IA---HPEEVFYNAARYY 112 (300)
Q Consensus 98 ~~---~~~~~~~~~~~~~ 112 (300)
-. -|.+..+.+..||
T Consensus 114 df~advppp~~~t~~~Ff 131 (379)
T COG5269 114 DFDADVPPPRIYTPDEFF 131 (379)
T ss_pred ccccCCCCccCCCchhHH
Confidence 32 2334444555554
No 65
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=5.6e-07 Score=79.68 Aligned_cols=56 Identities=27% Similarity=0.691 Sum_probs=51.8
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhh-hccch
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYE-ILKDE 88 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~-vL~d~ 88 (300)
..||.||||..+|+.++++.||..|++++|||....+...+.|.+|.+||. ||+..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999988878899999999999 77643
No 66
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.08 E-value=4.7e-06 Score=65.25 Aligned_cols=48 Identities=31% Similarity=0.530 Sum_probs=43.4
Q ss_pred ccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccch
Q 022251 38 LLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDE 88 (300)
Q Consensus 38 iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~ 88 (300)
||||+++++.+.||.|+|+.....|||+.++|--.. +|++|+++|...
T Consensus 61 IL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAs---KINEAKdlLe~~ 108 (112)
T KOG0723|consen 61 ILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLAS---KINEAKDLLEGT 108 (112)
T ss_pred HhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHHH---HHHHHHHHHhcc
Confidence 999999999999999999999999999999875444 799999999754
No 67
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=3.7e-06 Score=87.63 Aligned_cols=54 Identities=41% Similarity=0.824 Sum_probs=46.9
Q ss_pred ccccccccCcCCC----CCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccc
Q 022251 32 EDDCYDLLGVSQN----ANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKD 87 (300)
Q Consensus 32 ~~~~Y~iLgv~~~----as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d 87 (300)
..+-|+||.|+.+ ...+.||++|++||.+||||||| +..++|..+++||+.|+.
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP--EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP--EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHH
Confidence 4467999999864 24589999999999999999997 678999999999999984
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.00028 Score=59.13 Aligned_cols=68 Identities=24% Similarity=0.452 Sum_probs=55.2
Q ss_pred CCccccccccCcCC--CCCHHHHHHHHHHHHHhhCCCCCCC------cchHHHHHHHHHhhhhccchhHHHhhccc
Q 022251 30 CDEDDCYDLLGVSQ--NANSSEIKKAYYKLSLKYHPDKNPD------PDSRKLFVKIANAYEILKDEATREQYDYA 97 (300)
Q Consensus 30 ~~~~~~Y~iLgv~~--~as~~eIkkayr~la~~~HPDk~~~------~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 97 (300)
....+||.++|... ..+++.+..-|.-.++++|||+... ..|.+....|++||.+|+||-+|+.|=.-
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45678999998665 3466777778999999999999553 23678899999999999999999999643
No 69
>PTZ00475 RESA-like protein; Provisional
Probab=96.35 E-value=0.0036 Score=57.48 Aligned_cols=117 Identities=13% Similarity=0.106 Sum_probs=71.5
Q ss_pred CCChhHHHHHHHHHhhhhhhhhHhHhHHHHHHHhhcC---HHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhHhHHHHH
Q 022251 119 KTDPRAVLVGLLLIFSGFQYLNQWTRYNQAVAMVKKT---PAYRNKLRALELERSGGIPNKKKSNKQMDKKTGEDLSKEL 195 (300)
Q Consensus 119 ~~~~~~v~~~~~~~~s~~~y~~~~~~y~~~~~~~~~~---~~~r~~~~~~~~e~~~~~~~~~k~k~~~~~~~~e~l~~~l 195 (300)
-+||..+|..+|+.-.+..|++......-+.-.+.+. .......+.+.. ..++.|++|+.+.+..|++.|
T Consensus 3 iIDP~~fF~mlFgSe~l~~YIG~L~ma~~v~l~fe~~~~~edi~~~~~~i~~-------~M~~~QkeRE~kLAl~LrdrL 75 (282)
T PTZ00475 3 IIVPFIFFNLIFTSDMMYEYIENTKVPIFVKLFFGKSIFIEDIFYYVGMIMK-------EMMEGQNIREEEVAELLKDRL 75 (282)
T ss_pred cccHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHhcCCcchhhhhhhHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999888889998653322211111111 000011111111 123345667788888899999
Q ss_pred HHHhhcCCCCchhhHHHH-HHHhhhHHHHHHHHHHhhhheeeeecCCCCchhhhHHHhh
Q 022251 196 DLQIKGAEKPSVWELIGV-RLILLPYTIGKLLLWWGRWYWRYNVKKASYAWEDALYLTQ 253 (300)
Q Consensus 196 ~~~i~g~~kP~~~dll~v-ql~l~pysl~~~l~w~~~w~~ky~i~k~~~~~e~~~Yl~r 253 (300)
..+++| +..+.....- .--|.-.+++..++.+++|+|.. .+..||+.
T Consensus 76 q~YVdg--~~ew~~~~e~Eak~L~~ssFg~~iLesIGwiY~N---------va~~ylge 123 (282)
T PTZ00475 76 DLYIDN--EDEWEKLMENEISMLLKSSFSNFILESIGWTYEN---------VSNIFLEE 123 (282)
T ss_pred HHHcCC--hHHHHHHHHHHHHHHHhCcccHHHHHHhHHHHHH---------HHHHHHHH
Confidence 999855 3333222222 23447789999999999999997 66667765
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.05 E-value=0.01 Score=58.75 Aligned_cols=49 Identities=27% Similarity=0.463 Sum_probs=36.1
Q ss_pred ccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcc--------hHHHHHHHHHhhhh
Q 022251 36 YDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPD--------SRKLFVKIANAYEI 84 (300)
Q Consensus 36 Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~--------a~~~f~~i~~Ay~v 84 (300)
++=.++..=.+.+.|||+||+..+..||||.+..+ +.+.|-.+.+|++.
T Consensus 391 WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 391 WQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred cccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 34456666779999999999999999999988543 34445555555553
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.78 E-value=0.0046 Score=53.39 Aligned_cols=53 Identities=38% Similarity=0.567 Sum_probs=46.4
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC--------cchHHHHHHHHHhhhhc
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD--------PDSRKLFVKIANAYEIL 85 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~--------~~a~~~f~~i~~Ay~vL 85 (300)
.+.|.+||+...++..+|+++|+++....|||+-.+ ..+.++++.|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999653 23678889999998753
No 72
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.28 E-value=0.013 Score=50.45 Aligned_cols=68 Identities=28% Similarity=0.453 Sum_probs=53.7
Q ss_pred ccccccCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCcch------HHHHHHHHHhhhhccchhHHHhhcccccCC
Q 022251 34 DCYDLLGVSQNA--NSSEIKKAYYKLSLKYHPDKNPDPDS------RKLFVKIANAYEILKDEATREQYDYAIAHP 101 (300)
Q Consensus 34 ~~Y~iLgv~~~a--s~~eIkkayr~la~~~HPDk~~~~~a------~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 101 (300)
|++...|.++.+ ..+.++..|+.+.+.+|||+....+. -+.+..++.||.+|.||-.|..|=..+.+|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 345566666654 56778999999999999999986442 346889999999999999999997766544
No 73
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.49 E-value=0.11 Score=42.48 Aligned_cols=53 Identities=26% Similarity=0.302 Sum_probs=36.9
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchh
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEA 89 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~ 89 (300)
.--.||||++..+.++|.+.|.+|-...+|+++++.--. .+|..|.+.|..+-
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYLQ---SKV~rAKErl~~El 111 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYLQ---SKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHHH---HHHHHHHHHHHHHH
Confidence 346899999999999999999999999999988753222 36777777776544
No 74
>PF09320 DUF1977: Domain of unknown function (DUF1977); InterPro: IPR015399 This C-terminal domain is functionally uncharacterised and predominantly found in Dnaj-like proteins.
Probab=92.00 E-value=0.093 Score=41.60 Aligned_cols=59 Identities=10% Similarity=0.123 Sum_probs=50.2
Q ss_pred hhheeeeecCCCCchhhhHHHhhhcCCCC-HHHHhhhChhHHHHHHH---hhhhhhhhHHHHH
Q 022251 231 RWYWRYNVKKASYAWEDALYLTQKSLRVP-HDAWMNIDESKKEDLVN---RRLWEKSNLESYL 289 (300)
Q Consensus 231 ~w~~ky~i~k~~~~~e~~~Yl~r~~l~~~-~~~~~~l~~~~~~~~~~---~~lW~~~n~~~~~ 289 (300)
.....|++.+.+-+..+++||..++..-+ ...+..||..++.+|++ ++|+.+.+.++=.
T Consensus 15 ~~s~~y~~~R~T~~~~V~YYV~~~f~~~y~~~~l~~lE~~VE~~yv~~L~~~C~~E~~~r~~l 77 (107)
T PF09320_consen 15 TPSSPYTVERTTPNLKVPYYVNPDFVQKYSSSKLRQLERQVENDYVQNLRNQCERERQYRERL 77 (107)
T ss_pred cCCCCCceeeEcCCCCcceeECchhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999887766 44499999999999999 7999998888443
No 75
>PF14308 DnaJ-X: X-domain of DnaJ-containing
Probab=91.15 E-value=0.27 Score=43.41 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=48.2
Q ss_pred hhhhhhhhHhHHHHHHHHhhcCCCCchhhHHHH-HHHhhhHHHHHHHHHHhhhheeeeecCCCCchhhhHHHhh--hcCC
Q 022251 181 KQMDKKTGEDLSKELDLQIKGAEKPSVWELIGV-RLILLPYTIGKLLLWWGRWYWRYNVKKASYAWEDALYLTQ--KSLR 257 (300)
Q Consensus 181 ~~~~~~~~e~l~~~l~~~i~g~~kP~~~dll~v-ql~l~pysl~~~l~w~~~w~~ky~i~k~~~~~e~~~Yl~r--~~l~ 257 (300)
++++.++++.|.+.|.+++.|.. ..+...+.- ---|.--|++..|+++|+|+|.. .+..||+. .++|
T Consensus 4 ~~R~~~La~~L~~rL~~yv~~~~-~~f~~~~~~Ea~~L~~~sFg~~iL~~IG~vY~~---------~A~~~l~~~~~~lG 73 (204)
T PF14308_consen 4 KEREVELAEKLRDRLQPYVDGDK-EEFKEKMEEEAEDLKEESFGVEILHSIGWVYEN---------KAKQFLGKKKTFLG 73 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH---------HHHHHHHhcccccC
Confidence 44566788888888998885443 223222222 22336678888999999999998 88999966 6667
Q ss_pred CCH
Q 022251 258 VPH 260 (300)
Q Consensus 258 ~~~ 260 (300)
++.
T Consensus 74 ~~~ 76 (204)
T PF14308_consen 74 IGG 76 (204)
T ss_pred hHH
Confidence 554
No 76
>PF13446 RPT: A repeated domain in UCH-protein
Probab=77.03 E-value=4.4 Score=28.48 Aligned_cols=27 Identities=19% Similarity=0.482 Sum_probs=24.5
Q ss_pred cccccccCcCCCCCHHHHHHHHHHHHH
Q 022251 33 DDCYDLLGVSQNANSSEIKKAYYKLSL 59 (300)
Q Consensus 33 ~~~Y~iLgv~~~as~~eIkkayr~la~ 59 (300)
.+.|++|||+++.+.+.|-.+|.....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999998777
No 77
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=73.67 E-value=2.9 Score=39.50 Aligned_cols=53 Identities=34% Similarity=0.487 Sum_probs=42.1
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCCC-----CcchHHHHHHHHHhhhhccchhHHHhhcc
Q 022251 44 NANSSEIKKAYYKLSLKYHPDKNP-----DPDSRKLFVKIANAYEILKDEATREQYDY 96 (300)
Q Consensus 44 ~as~~eIkkayr~la~~~HPDk~~-----~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 96 (300)
.++..+|+.+|+..+...||++.. .....+-|++|.+||++|++...|...|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 357788999999999999999874 22456779999999999998665555554
No 78
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=67.29 E-value=11 Score=33.02 Aligned_cols=40 Identities=33% Similarity=0.358 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccch
Q 022251 42 SQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDE 88 (300)
Q Consensus 42 ~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~ 88 (300)
+++||.+||..|+.++..+|--| .+.-.+|-.||+.+-=.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHHHH
Confidence 57999999999999999999333 23445789999976433
No 79
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=59.64 E-value=16 Score=29.19 Aligned_cols=47 Identities=19% Similarity=0.339 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCC-cc----hHHHHHHHHHhhhhccchh
Q 022251 43 QNANSSEIKKAYYKLSLKYHPDKNPD-PD----SRKLFVKIANAYEILKDEA 89 (300)
Q Consensus 43 ~~as~~eIkkayr~la~~~HPDk~~~-~~----a~~~f~~i~~Ay~vL~d~~ 89 (300)
+..+..+++.|.|..-++.|||.... |. -++-++.++.-.+.|..+.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 34577899999999999999998763 32 2344778887777777654
No 80
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=45.87 E-value=59 Score=24.13 Aligned_cols=44 Identities=16% Similarity=0.275 Sum_probs=32.4
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHHH
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVK 77 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~~ 77 (300)
|--+++|+.|.|+..||+.|-++.+++..--..|+....+.|..
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~ 47 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEA 47 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHH
Confidence 45678899999999999999988888776555554444455543
No 81
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=39.03 E-value=63 Score=30.55 Aligned_cols=74 Identities=22% Similarity=0.210 Sum_probs=48.4
Q ss_pred HHHHHHHhhhccccCCccccccccCcCC-CCCHHHHHHHHHHHHHh-------hCCCCCCC----cchHHHHHHHHHhhh
Q 022251 16 IVLLLLISPSVAIYCDEDDCYDLLGVSQ-NANSSEIKKAYYKLSLK-------YHPDKNPD----PDSRKLFVKIANAYE 83 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Y~iLgv~~-~as~~eIkkayr~la~~-------~HPDk~~~----~~a~~~f~~i~~Ay~ 83 (300)
+++.+++...-++---..++++-||++. ..|.+|+.+--+.+..+ .++|.+.. -.-.+.|..+.+||+
T Consensus 65 ~~~y~~F~~~WGlNY~R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~ 144 (318)
T PF12725_consen 65 SVLYFLFYLLWGLNYYRPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYE 144 (318)
T ss_pred HHHHHHHHHHhhhhcCCcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHH
Confidence 3344444444555555678899999998 67888877766655443 34444321 134778999999999
Q ss_pred hccchh
Q 022251 84 ILKDEA 89 (300)
Q Consensus 84 vL~d~~ 89 (300)
.|++.-
T Consensus 145 ~l~~~~ 150 (318)
T PF12725_consen 145 NLAERY 150 (318)
T ss_pred HHHHhC
Confidence 888643
No 82
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=38.71 E-value=1.2e+02 Score=22.51 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=32.3
Q ss_pred ccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchHHHHH
Q 022251 34 DCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPDPDSRKLFV 76 (300)
Q Consensus 34 ~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~~~a~~~f~ 76 (300)
|--.+.|+.|.++.+||..|=.+.+++..=-..|+....+.|.
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~ 46 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFD 46 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHH
Confidence 4445678899999999999999999998766666544445554
No 83
>KOG4434 consensus Molecular chaperone SEC63, endoplasmic reticulum translocon component [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=36.31 E-value=20 Score=34.58 Aligned_cols=68 Identities=21% Similarity=0.296 Sum_probs=48.7
Q ss_pred hhhhhHhHHHHH-HHHhhcCCCCchhhHHHHHHHhhhHHHHHHHHHHhhhheeeeecCCCCchhhhHHHhhhcCCCCHHH
Q 022251 184 DKKTGEDLSKEL-DLQIKGAEKPSVWELIGVRLILLPYTIGKLLLWWGRWYWRYNVKKASYAWEDALYLTQKSLRVPHDA 262 (300)
Q Consensus 184 ~~~~~e~l~~~l-~~~i~g~~kP~~~dll~vql~l~pysl~~~l~w~~~w~~ky~i~k~~~~~e~~~Yl~r~~l~~~~~~ 262 (300)
+..+...|+++| .++..|...|.-+ ||+|....+. +.++.|..+.- +-.++|+-|++++++.+-+.+
T Consensus 40 Dn~evP~Lirqi~~vN~K~kE~PL~~----------pYslKaRvlL-hahLsRmpl~~-dtLEeDqqfiikkcp~lvqEM 107 (520)
T KOG4434|consen 40 DNYEVPRLIRQIAGVNDKGKEQPLSQ----------PYSLKARVLL-HAHLSRMPLES-DTLEEDQQFIIKKCPRLVQEM 107 (520)
T ss_pred cchHHHHHHHHcccccccccCCCccC----------chhHHHHHHH-HHHHhcCCCCh-hhhhhHHHHHHHHhHHHHHHH
Confidence 335666677776 4666777888775 9999877544 56677776654 456788899999998877766
Q ss_pred H
Q 022251 263 W 263 (300)
Q Consensus 263 ~ 263 (300)
-
T Consensus 108 V 108 (520)
T KOG4434|consen 108 V 108 (520)
T ss_pred H
Confidence 3
No 84
>CHL00185 ycf59 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=35.45 E-value=81 Score=30.07 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=42.4
Q ss_pred HHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhcc
Q 022251 17 VLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEILK 86 (300)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL~ 86 (300)
.++.++..+..--+...++|+.|||++..=..++=+.-...+.+.-|-.-. +|.-......+..+...|.
T Consensus 234 FLlsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tn~~a~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~ 305 (351)
T CHL00185 234 FLLSVFATMYLNDLQRSDFYAAIGLDARQFDMHVIRKTNESAARLFPVVLDVDNPKFFKYLDQCACANLKLI 305 (351)
T ss_pred HHHHHHHHheehhcchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHH
Confidence 344444444444577889999999998764444444455666777776643 3434444555565655554
No 85
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=34.55 E-value=29 Score=17.11 Aligned_cols=13 Identities=54% Similarity=0.736 Sum_probs=9.8
Q ss_pred HHHHHHHhhhhcc
Q 022251 74 LFVKIANAYEILK 86 (300)
Q Consensus 74 ~f~~i~~Ay~vL~ 86 (300)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4778888888774
No 86
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.51 E-value=53 Score=26.81 Aligned_cols=33 Identities=27% Similarity=0.289 Sum_probs=29.8
Q ss_pred ccccCcCCCCCHHHHHHHHHHHHHhhCCCCCCC
Q 022251 36 YDLLGVSQNANSSEIKKAYYKLSLKYHPDKNPD 68 (300)
Q Consensus 36 Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~~ 68 (300)
-.||+|++.-+.++|.+.|-.|-....+.+.++
T Consensus 62 ~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 62 QQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred hhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 479999999999999999999999998888764
No 87
>cd01047 ACSF Aerobic Cyclase System Fe-containing subunit (ACSF), ferritin-like diiron-binding domain. Aerobic Cyclase System, Fe-containing subunit (ACSF) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrivivax gelatinosus acsF codes for a conserved, putative binuclear iron-cluster-containing protein involved in aerobic oxidative cyclization of Mg-protoporphyrin IX monomethyl ester. AcsF and homologs have a leucine zipper and two copies of the conserved glutamate and histidine residues predicted to act as ligands for iron in the Ex(29-35)DExRH motifs. Several homologs of AcsF are found in a wide range of photosynthetic organisms, including Chlamydomonas reinhardtii Crd1 and Pharbitis nil PNZIP, suggesting that this aerobic oxidative cyclization mechanism is conserved from bacteria to plants.
Probab=32.43 E-value=1.1e+02 Score=28.79 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=42.7
Q ss_pred HHHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhcc
Q 022251 16 IVLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEILK 86 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL~ 86 (300)
..++.++.++..--+...++|+.|||++..=..++=+.-...+.+.-|-.-. +|.=.....++..+...|.
T Consensus 217 FFLlsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tn~~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~ 289 (323)
T cd01047 217 FFLLSVYATMYLNDHQRPDFYEALGLDTTEFDMHVIRETNETAARVFPAVLDVDNPEFRRGLDRLVDLNLKLE 289 (323)
T ss_pred HHHHHHHHhheeeccchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCChHHHHHHHHHHHHHHHHH
Confidence 4444555555555577899999999998764444444555667777776543 2333344445555555444
No 88
>TIGR02029 AcsF magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase. This model respresents the oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under aerobic conditions. This enzyme is believed to utilize a binuclear iron center and molecular oxygen. There are two isoforms of this enzyme in some plants and cyanobacterai which are differentially regulated based on the levels of copper and oxygen. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under aerobic conditions (a separate enzyme, BchE, acts under anaerobic conditions). This enzyme is found in plants, cyanobacteria and other photosynthetic bacteria.
Probab=30.04 E-value=1.2e+02 Score=28.90 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=40.7
Q ss_pred HHHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhcc
Q 022251 16 IVLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEILK 86 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL~ 86 (300)
..++.++.++..--+...++|+.|||++.-=..++=+.-...+.+.-|-.-. +|.=......+..+...|.
T Consensus 227 FFLLsVfaTmyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~ 299 (337)
T TIGR02029 227 FFLLSVYSTMYLRDHQRPGFYEALGLDATDFDLQVFRNTNETSGRIFPMTLNTEHPRFRRLLDRMAGYSEKIS 299 (337)
T ss_pred HHHHHHHHHHhhhhcccHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHHH
Confidence 3444444444444577889999999998754444444445566666676543 2333334444554544443
No 89
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=26.65 E-value=1.4e+02 Score=23.01 Aligned_cols=49 Identities=20% Similarity=0.405 Sum_probs=30.8
Q ss_pred CcCCCC-CHHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHhhhhccchhHHHhhcc
Q 022251 40 GVSQNA-NSSEIKKAYYKLSLKYHPDKNPDPDSRKLFVKIANAYEILKDEATREQYDY 96 (300)
Q Consensus 40 gv~~~a-s~~eIkkayr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~ 96 (300)
|++|++ ...++-+.+..++..++| ...+.+..|.+.| +.||.-+..||.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~------~~~~~~~~l~~~y--~~~~~~~~~~~~ 100 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTG------GDPELLRGLAQMY--VEDPRFAAMYDK 100 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS---------HHHHHHHHHHT--TSTHHHHHHHG-
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC------CCHHHHHHHHHHH--HcCHHHHhhccc
Confidence 556655 345577777777777776 2345788888888 678888888883
No 90
>PLN02508 magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
Probab=26.31 E-value=1.5e+02 Score=28.35 Aligned_cols=70 Identities=9% Similarity=0.119 Sum_probs=39.9
Q ss_pred HHHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhc
Q 022251 16 IVLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEIL 85 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL 85 (300)
..++.++..+..--+...++|+.|||++.-=..++=+.-...+.+.-|-.-. +|.=......+..+...|
T Consensus 233 FFLLsVfaTMyl~d~~R~~Fy~alGld~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l 304 (357)
T PLN02508 233 FFCLSVYVTMYLNDHQRTAFYEGIGLNTKQFNMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVVINQKL 304 (357)
T ss_pred HHHHHHHHHheeeccchHHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCCHHHHHHHHHHHHHHHHH
Confidence 3444444555555577889999999998754444444445566666676543 233233334444444433
No 91
>PF15240 Pro-rich: Proline-rich
Probab=25.10 E-value=52 Score=28.57 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhhhccccCCccccccccCcCC
Q 022251 11 AITSAIVLLLLISPSVAIYCDEDDCYDLLGVSQ 43 (300)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~iLgv~~ 43 (300)
.+++|+++|++++|.+.. ..+.++.+...|-.
T Consensus 2 LlVLLSvALLALSSAQ~~-dEdv~~e~~~~~~~ 33 (179)
T PF15240_consen 2 LLVLLSVALLALSSAQST-DEDVSQEESPSVIS 33 (179)
T ss_pred hhHHHHHHHHHhhhcccc-ccccccccCccccc
Confidence 456667778888877776 34455666555444
No 92
>PF08252 Leader_CPA1: arg-2/CPA1 leader peptide ; InterPro: IPR013203 In this family there are leaders peptides involved in the regulation of the glutaminase subunit (small subunit) of arginine-specific carbamoyl phosphate synthetase. In Neurospora crassa it is a small upstream ORF of 24 codons above the arg-2 locus []. In yeast it is the leader peptide of the CPA1 gene. The 5' region of CPA1 mRNA contains a 25 codon upstream open reading frame. The leader peptide, the product of the upstream open reading frame, plays an essential, negative role in the specific repression of CPA1 by arginine [].; PDB: 2XL1_A.
Probab=24.82 E-value=58 Score=18.53 Aligned_cols=15 Identities=20% Similarity=0.707 Sum_probs=11.0
Q ss_pred HHHHHHHhhhhhhhh
Q 022251 270 KKEDLVNRRLWEKSN 284 (300)
Q Consensus 270 ~~~~~~~~~lW~~~n 284 (300)
+-+||++..+|+.++
T Consensus 9 t~qDYiSDhiWk~~s 23 (24)
T PF08252_consen 9 TSQDYISDHIWKASS 23 (24)
T ss_dssp --HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhc
Confidence 457899999998764
No 93
>PRK13654 magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional
Probab=21.01 E-value=1.8e+02 Score=27.95 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=42.4
Q ss_pred HHHHHHHhhhccccCCccccccccCcCCCCCHHHHHHHHHHHHHhhCCCCCC--CcchHHHHHHHHHhhhhcc
Q 022251 16 IVLLLLISPSVAIYCDEDDCYDLLGVSQNANSSEIKKAYYKLSLKYHPDKNP--DPDSRKLFVKIANAYEILK 86 (300)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkayr~la~~~HPDk~~--~~~a~~~f~~i~~Ay~vL~ 86 (300)
..++.++..+..--+...++|+.|||++..=..++=+.-...+.+.-|-.-. +|.=.....++..+...|.
T Consensus 237 FFLlsVfaTmyl~d~~R~~Fy~alGlD~~~yD~~Vi~~Tne~s~rvFP~~Ldvd~P~F~~~L~~~~~~n~~l~ 309 (355)
T PRK13654 237 FFLLAVFATMYLRDHERPDFYEALGLDAREYDQEVIRKTNETSARVFPVVLDVDDPRFYARLERCVENNEKLR 309 (355)
T ss_pred HHHHHHHhheeeecccchHHHHHhCCCHHHhhHHHHHHhhHHHHhhCCeeecCCChHHHHHHHHHHHHHHHHH
Confidence 3444444555555577899999999998764445545555667777776543 2333334444555554444
Done!