Query 022253
Match_columns 300
No_of_seqs 475 out of 1082
Neff 12.1
Searched_HMMs 46136
Date Fri Mar 29 09:11:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022253.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022253hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 6.9E-41 1.5E-45 260.8 24.8 266 20-292 7-294 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 7.7E-40 1.7E-44 252.5 23.0 265 24-299 5-273 (276)
3 PRK03592 haloalkane dehalogena 100.0 3.2E-38 6.8E-43 246.0 25.5 266 20-294 6-291 (295)
4 KOG4178 Soluble epoxide hydrol 100.0 6.7E-38 1.5E-42 231.8 23.5 274 16-292 17-320 (322)
5 PLN02679 hydrolase, alpha/beta 100.0 6.3E-38 1.4E-42 249.2 24.9 265 24-293 64-358 (360)
6 PRK10349 carboxylesterase BioH 100.0 3.6E-37 7.8E-42 235.4 22.7 248 34-291 4-255 (256)
7 PRK00870 haloalkane dehalogena 100.0 4.9E-37 1.1E-41 239.9 23.4 260 21-292 19-301 (302)
8 PRK03204 haloalkane dehalogena 100.0 9.1E-37 2E-41 235.7 22.8 259 21-289 14-285 (286)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.7E-36 8E-41 233.4 25.7 254 31-291 19-282 (282)
10 PLN02578 hydrolase 100.0 4.5E-36 9.7E-41 238.4 26.1 258 25-290 70-353 (354)
11 TIGR03056 bchO_mg_che_rel puta 100.0 4.5E-36 9.8E-41 232.7 24.9 258 24-290 9-278 (278)
12 PRK06489 hypothetical protein; 100.0 6.4E-36 1.4E-40 238.2 24.8 260 30-294 48-359 (360)
13 PLN03084 alpha/beta hydrolase 100.0 2.6E-35 5.7E-40 232.7 27.2 261 25-291 108-383 (383)
14 PLN02385 hydrolase; alpha/beta 100.0 3E-36 6.5E-41 239.5 20.4 265 23-294 63-347 (349)
15 PLN02965 Probable pheophorbida 100.0 1.8E-35 3.8E-40 225.5 22.2 237 47-292 5-253 (255)
16 PRK10673 acyl-CoA esterase; Pr 100.0 2.9E-35 6.3E-40 225.1 23.3 246 34-291 3-254 (255)
17 PLN03087 BODYGUARD 1 domain co 100.0 5.3E-35 1.1E-39 235.1 25.7 269 21-292 176-479 (481)
18 TIGR02427 protocat_pcaD 3-oxoa 100.0 9.2E-35 2E-39 222.0 23.8 246 34-290 2-251 (251)
19 TIGR03611 RutD pyrimidine util 100.0 9.4E-35 2E-39 222.8 23.2 249 35-291 2-257 (257)
20 KOG4409 Predicted hydrolase/ac 100.0 2.6E-34 5.6E-39 213.4 23.7 269 21-292 65-364 (365)
21 PRK10749 lysophospholipase L2; 100.0 1.6E-34 3.5E-39 227.5 23.0 267 24-292 33-329 (330)
22 PRK11126 2-succinyl-6-hydroxy- 100.0 4.2E-34 9.2E-39 216.9 23.0 234 45-291 2-241 (242)
23 KOG1454 Predicted hydrolase/ac 100.0 9.8E-35 2.1E-39 224.6 18.5 276 16-293 20-325 (326)
24 PHA02857 monoglyceride lipase; 100.0 1.4E-33 3.1E-38 218.0 24.6 254 26-292 5-273 (276)
25 PRK08775 homoserine O-acetyltr 100.0 5.6E-34 1.2E-38 225.8 22.3 267 20-294 35-341 (343)
26 TIGR01738 bioH putative pimelo 100.0 4.6E-34 1E-38 217.3 20.8 237 45-289 4-245 (245)
27 PRK07581 hypothetical protein; 100.0 5.6E-34 1.2E-38 226.0 21.4 272 19-293 13-337 (339)
28 PLN02298 hydrolase, alpha/beta 100.0 6.4E-34 1.4E-38 225.0 20.1 266 22-296 33-321 (330)
29 PLN02894 hydrolase, alpha/beta 100.0 3.6E-32 7.9E-37 218.2 28.6 263 33-297 93-390 (402)
30 PRK00175 metX homoserine O-ace 100.0 4.9E-33 1.1E-37 222.5 22.3 264 30-295 31-377 (379)
31 TIGR01392 homoserO_Ac_trn homo 100.0 6.6E-33 1.4E-37 220.4 21.4 260 30-290 14-351 (351)
32 TIGR01250 pro_imino_pep_2 prol 100.0 4.9E-32 1.1E-36 211.2 24.8 259 25-290 6-288 (288)
33 PLN02211 methyl indole-3-aceta 100.0 3.6E-32 7.7E-37 208.1 23.2 250 30-292 5-270 (273)
34 PF12697 Abhydrolase_6: Alpha/ 100.0 1.6E-33 3.5E-38 211.9 15.3 221 48-284 1-228 (228)
35 PRK14875 acetoin dehydrogenase 100.0 2.5E-32 5.5E-37 220.0 22.1 252 24-291 112-370 (371)
36 PLN02980 2-oxoglutarate decarb 100.0 1E-31 2.2E-36 245.8 26.2 275 17-297 1340-1644(1655)
37 TIGR03695 menH_SHCHC 2-succiny 100.0 7E-32 1.5E-36 206.0 19.5 242 45-290 1-251 (251)
38 TIGR01249 pro_imino_pep_1 prol 100.0 1E-30 2.3E-35 204.2 23.2 263 22-291 5-304 (306)
39 COG2267 PldB Lysophospholipase 100.0 1.5E-30 3.3E-35 199.5 22.7 267 20-294 8-296 (298)
40 PLN02652 hydrolase; alpha/beta 100.0 3.4E-30 7.4E-35 205.1 22.6 260 24-294 113-389 (395)
41 PLN02511 hydrolase 100.0 1.4E-30 3E-35 208.4 20.2 265 20-294 70-367 (388)
42 KOG2984 Predicted hydrolase [G 100.0 3.9E-31 8.4E-36 180.4 12.0 252 19-292 19-276 (277)
43 KOG1455 Lysophospholipase [Lip 100.0 5E-30 1.1E-34 187.2 17.0 266 21-292 27-312 (313)
44 PRK05855 short chain dehydroge 100.0 1.4E-29 3E-34 215.9 22.2 257 29-293 10-293 (582)
45 COG1647 Esterase/lipase [Gener 100.0 1.3E-28 2.8E-33 171.0 20.0 224 44-291 14-243 (243)
46 KOG2382 Predicted alpha/beta h 100.0 1.1E-27 2.4E-32 178.0 22.3 243 40-292 47-313 (315)
47 PRK06765 homoserine O-acetyltr 100.0 5.6E-28 1.2E-32 191.6 21.3 262 30-291 39-387 (389)
48 PRK13604 luxD acyl transferase 100.0 3.6E-27 7.8E-32 177.3 21.7 240 22-292 10-259 (307)
49 PRK10985 putative hydrolase; P 100.0 2.7E-27 5.9E-32 186.0 21.5 270 20-293 30-321 (324)
50 TIGR01607 PST-A Plasmodium sub 100.0 3.4E-27 7.4E-32 185.3 21.6 251 26-290 2-331 (332)
51 PRK05077 frsA fermentation/res 100.0 1E-26 2.2E-31 186.8 23.6 239 21-292 168-412 (414)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 1.8E-25 4E-30 171.3 20.8 239 30-290 10-273 (274)
53 PLN02872 triacylglycerol lipas 99.9 6.7E-25 1.4E-29 174.1 22.3 274 20-296 43-393 (395)
54 PF00561 Abhydrolase_1: alpha/ 99.9 3.8E-26 8.2E-31 172.2 11.9 212 73-286 1-229 (230)
55 PRK11071 esterase YqiA; Provis 99.9 1.2E-24 2.7E-29 156.7 18.8 183 46-290 2-189 (190)
56 PRK10566 esterase; Provisional 99.9 5.4E-24 1.2E-28 162.1 19.4 213 34-292 15-248 (249)
57 TIGR01838 PHA_synth_I poly(R)- 99.9 1.6E-23 3.5E-28 170.7 21.8 244 30-279 172-462 (532)
58 TIGR01836 PHA_synth_III_C poly 99.9 5.2E-23 1.1E-27 163.7 22.6 267 20-291 35-349 (350)
59 PRK07868 acyl-CoA synthetase; 99.9 9.9E-23 2.1E-27 181.5 24.8 263 30-297 47-366 (994)
60 KOG2564 Predicted acetyltransf 99.9 1.7E-23 3.6E-28 150.6 13.2 260 24-293 51-328 (343)
61 KOG1552 Predicted alpha/beta h 99.9 1.6E-22 3.4E-27 145.2 16.9 218 20-296 34-256 (258)
62 KOG4391 Predicted alpha/beta h 99.9 1.9E-23 4.1E-28 144.7 11.4 221 22-294 55-284 (300)
63 COG0596 MhpC Predicted hydrola 99.9 7.7E-22 1.7E-26 152.2 22.0 256 30-290 8-280 (282)
64 COG0429 Predicted hydrolase of 99.9 5E-22 1.1E-26 147.6 17.4 270 20-294 48-342 (345)
65 PF12695 Abhydrolase_5: Alpha/ 99.9 3.1E-22 6.8E-27 139.6 15.4 142 47-272 1-145 (145)
66 PF03096 Ndr: Ndr family; Int 99.9 2.1E-20 4.5E-25 138.0 22.0 263 24-292 2-279 (283)
67 COG2021 MET2 Homoserine acetyl 99.9 2.4E-20 5.3E-25 141.0 21.8 262 30-291 34-367 (368)
68 COG3208 GrsT Predicted thioest 99.9 1E-20 2.2E-25 135.2 18.1 228 43-292 5-236 (244)
69 KOG1838 Alpha/beta hydrolase [ 99.9 1.4E-20 3.1E-25 145.1 17.9 270 19-292 91-388 (409)
70 PF06342 DUF1057: Alpha/beta h 99.9 4.7E-19 1E-23 129.2 23.9 231 45-289 35-296 (297)
71 TIGR03101 hydr2_PEP hydrolase, 99.9 8.4E-21 1.8E-25 142.5 15.3 124 25-148 4-135 (266)
72 KOG2931 Differentiation-relate 99.9 2.5E-18 5.4E-23 125.2 25.5 265 21-292 22-306 (326)
73 PRK11460 putative hydrolase; P 99.9 8.7E-20 1.9E-24 136.1 18.7 172 43-289 14-209 (232)
74 COG1506 DAP2 Dipeptidyl aminop 99.9 5E-20 1.1E-24 156.0 18.5 235 18-294 362-618 (620)
75 KOG4667 Predicted esterase [Li 99.8 1E-19 2.2E-24 126.2 15.2 216 43-291 31-257 (269)
76 PLN00021 chlorophyllase 99.8 3.5E-19 7.6E-24 137.5 17.1 186 31-278 38-246 (313)
77 PF00326 Peptidase_S9: Prolyl 99.8 5.3E-19 1.2E-23 131.1 14.8 193 61-294 2-211 (213)
78 TIGR02821 fghA_ester_D S-formy 99.8 3.5E-18 7.7E-23 131.3 19.5 105 43-148 40-174 (275)
79 PLN02442 S-formylglutathione h 99.8 7.1E-18 1.5E-22 129.8 20.2 197 32-274 32-264 (283)
80 PF06500 DUF1100: Alpha/beta h 99.8 2.2E-17 4.8E-22 128.6 20.9 233 21-292 165-409 (411)
81 PF05448 AXE1: Acetyl xylan es 99.8 1.7E-17 3.8E-22 128.3 20.3 227 29-292 64-320 (320)
82 TIGR01849 PHB_depoly_PhaZ poly 99.8 1.4E-16 3.1E-21 125.4 23.2 245 45-291 102-405 (406)
83 TIGR01840 esterase_phb esteras 99.8 3.1E-17 6.7E-22 121.3 17.1 105 43-148 11-131 (212)
84 PF00975 Thioesterase: Thioest 99.8 6.6E-17 1.4E-21 121.6 19.0 220 46-289 1-229 (229)
85 PRK10162 acetyl esterase; Prov 99.8 1.6E-16 3.4E-21 124.5 20.7 232 24-293 60-316 (318)
86 PF01738 DLH: Dienelactone hyd 99.8 1E-16 2.2E-21 119.3 18.0 177 43-292 12-217 (218)
87 PF06821 Ser_hydrolase: Serine 99.8 4.2E-17 9.2E-22 114.6 13.8 155 48-276 1-157 (171)
88 PF02230 Abhydrolase_2: Phosph 99.7 9.3E-17 2E-21 119.0 15.4 177 42-292 11-215 (216)
89 TIGR03230 lipo_lipase lipoprot 99.7 2.7E-17 5.9E-22 130.8 13.1 107 43-149 39-156 (442)
90 TIGR01839 PHA_synth_II poly(R) 99.7 1.1E-15 2.4E-20 124.0 22.0 235 30-273 199-482 (560)
91 COG0400 Predicted esterase [Ge 99.7 4.4E-16 9.4E-21 111.9 14.8 174 41-292 14-205 (207)
92 COG2945 Predicted hydrolase of 99.7 1.7E-15 3.6E-20 103.8 16.7 171 42-290 25-205 (210)
93 cd00707 Pancreat_lipase_like P 99.7 5.4E-17 1.2E-21 123.9 9.8 123 24-149 17-149 (275)
94 TIGR00976 /NonD putative hydro 99.7 4.4E-16 9.5E-21 131.0 15.0 121 27-148 2-133 (550)
95 COG0412 Dienelactone hydrolase 99.7 1.2E-14 2.6E-19 108.0 21.0 195 24-293 5-234 (236)
96 PF05728 UPF0227: Uncharacteri 99.7 8.4E-15 1.8E-19 104.0 17.8 180 48-289 2-186 (187)
97 PRK10115 protease 2; Provision 99.7 1.7E-14 3.7E-19 123.4 20.6 214 22-273 417-654 (686)
98 KOG2565 Predicted hydrolases o 99.7 3.5E-15 7.5E-20 112.4 14.2 124 21-146 124-263 (469)
99 COG3458 Acetyl esterase (deace 99.7 6.2E-15 1.3E-19 106.5 14.4 223 30-292 65-317 (321)
100 COG4757 Predicted alpha/beta h 99.7 4E-15 8.8E-20 104.9 12.7 255 24-289 8-280 (281)
101 KOG2624 Triglyceride lipase-ch 99.6 5.7E-14 1.2E-18 110.6 19.1 272 20-293 47-399 (403)
102 PF02273 Acyl_transf_2: Acyl t 99.6 1.1E-13 2.5E-18 98.6 17.6 227 23-279 4-243 (294)
103 PF12146 Hydrolase_4: Putative 99.6 2.8E-15 6.1E-20 90.7 7.9 76 31-107 1-79 (79)
104 PF08538 DUF1749: Protein of u 99.6 3.8E-15 8.3E-20 111.5 10.2 231 44-290 32-303 (303)
105 COG3571 Predicted hydrolase of 99.6 3.5E-13 7.5E-18 89.5 16.9 181 44-292 13-211 (213)
106 COG3545 Predicted esterase of 99.6 4.3E-13 9.4E-18 91.0 16.7 173 45-291 2-178 (181)
107 PF10230 DUF2305: Uncharacteri 99.6 1.2E-12 2.5E-17 99.5 21.1 103 45-148 2-123 (266)
108 COG3243 PhaC Poly(3-hydroxyalk 99.6 1.7E-13 3.6E-18 105.8 15.1 244 44-296 106-403 (445)
109 PF12740 Chlorophyllase2: Chlo 99.5 3E-13 6.4E-18 99.6 14.1 181 36-278 8-211 (259)
110 TIGR03502 lipase_Pla1_cef extr 99.5 6.1E-14 1.3E-18 118.8 11.8 106 26-132 422-575 (792)
111 PRK10252 entF enterobactin syn 99.5 6.9E-13 1.5E-17 123.6 19.0 101 44-147 1067-1171(1296)
112 PF02129 Peptidase_S15: X-Pro 99.5 3.2E-12 6.9E-17 98.4 19.5 120 30-150 1-139 (272)
113 PF09752 DUF2048: Uncharacteri 99.5 5.9E-12 1.3E-16 96.1 19.1 237 43-290 90-347 (348)
114 PF07859 Abhydrolase_3: alpha/ 99.5 5.3E-13 1.1E-17 99.0 12.7 94 48-149 1-112 (211)
115 PRK05371 x-prolyl-dipeptidyl a 99.5 6E-12 1.3E-16 108.7 19.9 219 65-293 271-520 (767)
116 KOG3043 Predicted hydrolase re 99.5 1.3E-12 2.7E-17 92.2 11.8 178 39-292 33-240 (242)
117 KOG3975 Uncharacterized conser 99.5 3E-11 6.4E-16 86.6 18.0 252 34-289 18-300 (301)
118 PF06028 DUF915: Alpha/beta hy 99.4 3.1E-11 6.8E-16 90.1 17.6 202 44-290 10-253 (255)
119 KOG1515 Arylacetamide deacetyl 99.4 7.2E-11 1.6E-15 91.4 20.0 232 30-292 72-335 (336)
120 KOG2551 Phospholipase/carboxyh 99.4 1.5E-11 3.2E-16 86.9 14.7 178 44-296 4-224 (230)
121 COG3319 Thioesterase domains o 99.4 2.8E-11 6.1E-16 90.0 16.8 100 46-148 1-104 (257)
122 PF03959 FSH1: Serine hydrolas 99.4 3.6E-12 7.9E-17 93.9 12.0 161 44-276 3-205 (212)
123 PF07224 Chlorophyllase: Chlor 99.4 8E-12 1.7E-16 90.4 12.7 114 32-149 33-159 (307)
124 COG0657 Aes Esterase/lipase [L 99.4 6.4E-11 1.4E-15 93.2 17.9 115 32-150 64-194 (312)
125 KOG4627 Kynurenine formamidase 99.4 7.6E-12 1.7E-16 86.9 10.6 186 36-277 58-252 (270)
126 PTZ00472 serine carboxypeptida 99.4 1.8E-10 4E-15 94.3 20.3 125 24-149 50-218 (462)
127 PF07819 PGAP1: PGAP1-like pro 99.4 1.1E-11 2.5E-16 91.6 11.2 103 44-150 3-126 (225)
128 PRK04940 hypothetical protein; 99.3 4.8E-10 1E-14 78.1 17.5 169 48-290 2-178 (180)
129 PF10503 Esterase_phd: Esteras 99.3 2.8E-10 6E-15 83.1 16.9 104 44-148 15-133 (220)
130 KOG2100 Dipeptidyl aminopeptid 99.3 1.2E-10 2.5E-15 100.6 17.1 226 18-293 495-748 (755)
131 PF08840 BAAT_C: BAAT / Acyl-C 99.3 2.3E-11 4.9E-16 89.5 8.5 150 99-274 6-164 (213)
132 PF03403 PAF-AH_p_II: Platelet 99.2 1.2E-10 2.6E-15 92.8 11.9 104 43-148 98-263 (379)
133 PF06057 VirJ: Bacterial virul 99.2 1.7E-10 3.8E-15 80.5 11.0 97 46-148 3-108 (192)
134 PF12715 Abhydrolase_7: Abhydr 99.2 9.6E-11 2.1E-15 90.5 10.7 129 18-147 83-260 (390)
135 KOG2112 Lysophospholipase [Lip 99.2 2.4E-10 5.1E-15 80.3 11.7 174 45-291 3-203 (206)
136 smart00824 PKS_TE Thioesterase 99.2 1.6E-09 3.4E-14 80.4 15.6 96 50-148 2-103 (212)
137 COG4188 Predicted dienelactone 99.2 5.4E-11 1.2E-15 91.2 6.0 206 44-281 70-303 (365)
138 PF11339 DUF3141: Protein of u 99.2 1.5E-08 3.3E-13 81.0 19.2 83 64-151 92-179 (581)
139 PF00450 Peptidase_S10: Serine 99.1 1.5E-08 3.3E-13 83.3 19.1 124 25-149 15-183 (415)
140 KOG2281 Dipeptidyl aminopeptid 99.1 3.5E-09 7.5E-14 86.2 13.3 222 26-291 618-866 (867)
141 COG4814 Uncharacterized protei 99.1 2.2E-08 4.8E-13 72.4 15.9 103 45-148 45-177 (288)
142 PLN02733 phosphatidylcholine-s 99.1 1.2E-09 2.5E-14 88.3 10.7 94 56-150 105-204 (440)
143 COG4099 Predicted peptidase [G 99.1 2.9E-09 6.2E-14 78.7 11.1 117 30-147 170-304 (387)
144 PF01674 Lipase_2: Lipase (cla 99.1 2.1E-10 4.5E-15 83.6 4.8 87 46-133 2-96 (219)
145 PF00151 Lipase: Lipase; Inte 99.0 2.1E-10 4.6E-15 89.5 4.6 107 43-149 69-189 (331)
146 PF05677 DUF818: Chlamydia CHL 99.0 1E-07 2.2E-12 72.5 18.6 109 20-133 111-236 (365)
147 KOG3253 Predicted alpha/beta h 99.0 6.8E-09 1.5E-13 84.0 12.6 160 44-275 175-348 (784)
148 KOG1553 Predicted alpha/beta h 99.0 1.5E-09 3.2E-14 81.9 7.0 128 17-147 210-345 (517)
149 KOG3847 Phospholipase A2 (plat 99.0 1.4E-08 2.9E-13 75.8 10.9 170 44-289 117-345 (399)
150 COG3150 Predicted esterase [Ge 99.0 1.7E-08 3.8E-13 68.1 10.3 90 48-149 2-93 (191)
151 PF05990 DUF900: Alpha/beta hy 98.9 2.1E-08 4.5E-13 74.8 10.5 106 43-148 16-138 (233)
152 PF05705 DUF829: Eukaryotic pr 98.9 2.7E-07 5.9E-12 69.8 16.7 62 228-289 175-240 (240)
153 PF03583 LIP: Secretory lipase 98.9 1.9E-07 4.2E-12 72.1 15.7 46 229-274 217-266 (290)
154 PF04301 DUF452: Protein of un 98.9 6.5E-08 1.4E-12 69.8 12.0 82 44-149 10-92 (213)
155 COG3509 LpqC Poly(3-hydroxybut 98.9 4.4E-08 9.5E-13 72.9 11.0 126 20-147 34-179 (312)
156 PF10142 PhoPQ_related: PhoPQ- 98.9 7.7E-07 1.7E-11 70.0 18.0 158 102-294 159-322 (367)
157 COG2936 Predicted acyl esteras 98.8 1E-07 2.2E-12 78.1 12.9 125 24-148 22-160 (563)
158 PRK10439 enterobactin/ferric e 98.8 5.6E-07 1.2E-11 73.0 16.5 116 32-147 194-323 (411)
159 PLN02606 palmitoyl-protein thi 98.8 2.9E-07 6.3E-12 69.6 13.6 102 44-148 25-133 (306)
160 COG1075 LipA Predicted acetylt 98.7 7.1E-08 1.5E-12 76.1 8.7 102 45-149 59-166 (336)
161 PF05057 DUF676: Putative seri 98.7 4.6E-08 9.9E-13 72.4 7.1 86 44-131 3-97 (217)
162 PF10340 DUF2424: Protein of u 98.7 9.9E-07 2.1E-11 69.2 13.0 107 43-150 120-238 (374)
163 COG4782 Uncharacterized protei 98.6 4E-07 8.6E-12 69.9 9.6 106 43-148 114-235 (377)
164 PF05577 Peptidase_S28: Serine 98.6 7.2E-07 1.6E-11 73.7 12.0 115 33-148 15-149 (434)
165 KOG1551 Uncharacterized conser 98.6 2.9E-06 6.2E-11 62.2 13.2 234 44-294 112-368 (371)
166 PF12048 DUF3530: Protein of u 98.6 2.1E-05 4.5E-10 61.5 19.0 127 22-148 63-230 (310)
167 KOG4840 Predicted hydrolases o 98.6 1.8E-06 4E-11 61.4 10.7 102 44-148 35-145 (299)
168 COG1073 Hydrolases of the alph 98.5 1.2E-06 2.6E-11 68.6 10.4 67 226-292 226-297 (299)
169 PF00756 Esterase: Putative es 98.5 4.6E-07 9.9E-12 69.2 7.4 53 97-149 97-152 (251)
170 PLN02209 serine carboxypeptida 98.5 9.4E-05 2E-09 60.6 20.3 124 24-148 42-213 (437)
171 PF08386 Abhydrolase_4: TAP-li 98.4 1.2E-06 2.6E-11 56.3 7.1 61 231-292 34-94 (103)
172 PLN03016 sinapoylglucose-malat 98.4 0.0001 2.3E-09 60.3 19.8 125 23-148 39-211 (433)
173 KOG1282 Serine carboxypeptidas 98.4 0.00016 3.4E-09 58.9 19.5 124 24-149 47-215 (454)
174 COG1505 Serine proteases of th 98.4 5.6E-06 1.2E-10 67.8 11.1 230 22-292 395-646 (648)
175 KOG3724 Negative regulator of 98.4 6.8E-06 1.5E-10 69.3 11.5 120 25-148 61-221 (973)
176 cd00312 Esterase_lipase Estera 98.3 4.8E-06 1.1E-10 70.2 10.5 119 29-148 76-214 (493)
177 COG1770 PtrB Protease II [Amin 98.3 4E-05 8.7E-10 63.8 15.0 126 24-149 422-564 (682)
178 COG2272 PnbA Carboxylesterase 98.3 3.8E-06 8.2E-11 67.5 8.9 118 30-148 78-218 (491)
179 COG4553 DepA Poly-beta-hydroxy 98.3 0.00045 9.8E-09 51.8 18.9 105 44-149 102-211 (415)
180 KOG2237 Predicted serine prote 98.2 3.6E-05 7.7E-10 63.7 11.7 127 22-148 442-585 (712)
181 KOG3101 Esterase D [General fu 98.2 5.1E-05 1.1E-09 53.9 10.7 105 44-149 43-178 (283)
182 PF11144 DUF2920: Protein of u 98.2 0.00059 1.3E-08 54.2 17.4 63 232-294 294-370 (403)
183 PF02450 LCAT: Lecithin:choles 98.1 2.5E-05 5.5E-10 63.3 9.1 81 61-149 66-162 (389)
184 PLN02633 palmitoyl protein thi 98.0 8.9E-05 1.9E-09 56.5 10.5 102 44-148 24-132 (314)
185 PLN02213 sinapoylglucose-malat 98.0 0.00092 2E-08 52.8 16.0 61 231-292 233-317 (319)
186 KOG2541 Palmitoyl protein thio 98.0 7.7E-05 1.7E-09 55.1 9.1 99 46-148 24-129 (296)
187 PF00135 COesterase: Carboxyle 98.0 7.3E-05 1.6E-09 63.9 10.1 120 28-148 105-246 (535)
188 KOG2183 Prolylcarboxypeptidase 98.0 8.7E-05 1.9E-09 58.3 9.1 102 45-147 80-202 (492)
189 COG2382 Fes Enterochelin ester 97.9 0.0005 1.1E-08 52.2 11.7 105 43-148 96-213 (299)
190 PF04083 Abhydro_lipase: Parti 97.8 3.4E-05 7.3E-10 44.1 4.1 42 20-62 11-59 (63)
191 PF02089 Palm_thioest: Palmito 97.8 3E-05 6.5E-10 58.5 4.0 105 43-148 3-117 (279)
192 COG2939 Carboxypeptidase C (ca 97.7 0.0023 5E-08 52.2 14.1 105 43-148 99-237 (498)
193 KOG3967 Uncharacterized conser 97.7 0.00083 1.8E-08 48.0 9.6 106 43-148 99-228 (297)
194 cd00741 Lipase Lipase. Lipase 97.7 0.00016 3.5E-09 50.5 6.2 50 99-148 11-68 (153)
195 COG0627 Predicted esterase [Ge 97.7 0.00033 7.1E-09 54.6 8.2 107 43-150 52-190 (316)
196 COG2819 Predicted hydrolase of 97.6 0.0019 4E-08 48.4 11.5 50 99-148 121-173 (264)
197 PF01764 Lipase_3: Lipase (cla 97.5 0.0003 6.5E-09 48.4 5.9 37 97-133 49-85 (140)
198 KOG2182 Hydrolytic enzymes of 97.4 0.00089 1.9E-08 54.2 8.1 105 43-148 84-208 (514)
199 PLN02517 phosphatidylcholine-s 97.4 0.0009 2E-08 55.8 7.5 86 61-148 157-264 (642)
200 COG2830 Uncharacterized protei 97.3 0.0016 3.4E-08 44.3 7.0 79 45-147 11-90 (214)
201 PF11187 DUF2974: Protein of u 97.3 0.0008 1.7E-08 49.9 6.3 51 97-148 70-124 (224)
202 PF07082 DUF1350: Protein of u 97.3 0.041 8.9E-07 41.0 16.7 94 44-146 16-124 (250)
203 KOG1202 Animal-type fatty acid 97.3 0.024 5.1E-07 51.5 15.3 97 43-149 2121-2221(2376)
204 PF06441 EHN: Epoxide hydrolas 97.2 0.0011 2.3E-08 43.1 5.0 46 18-65 65-111 (112)
205 COG3946 VirJ Type IV secretory 97.2 0.002 4.3E-08 50.9 7.1 86 44-135 259-349 (456)
206 KOG2369 Lecithin:cholesterol a 97.1 0.0009 2E-08 53.9 4.9 83 61-148 125-226 (473)
207 cd00519 Lipase_3 Lipase (class 97.0 0.0015 3.2E-08 49.2 5.1 24 110-133 126-149 (229)
208 KOG2521 Uncharacterized conser 96.8 0.067 1.4E-06 42.4 12.9 65 231-295 225-293 (350)
209 PLN02162 triacylglycerol lipas 96.8 0.0039 8.5E-08 50.7 6.2 35 97-131 263-297 (475)
210 PF06259 Abhydrolase_8: Alpha/ 96.8 0.0059 1.3E-07 43.3 6.4 53 96-148 88-145 (177)
211 KOG4372 Predicted alpha/beta h 96.8 0.0031 6.7E-08 50.0 5.2 86 43-129 78-167 (405)
212 PLN00413 triacylglycerol lipas 96.8 0.005 1.1E-07 50.2 6.4 35 97-131 269-303 (479)
213 TIGR03712 acc_sec_asp2 accesso 96.7 0.27 5.8E-06 40.6 18.1 113 30-148 274-391 (511)
214 KOG1516 Carboxylesterase and r 96.7 0.02 4.4E-07 49.3 10.1 119 30-148 95-233 (545)
215 PF11288 DUF3089: Protein of u 96.6 0.0061 1.3E-07 44.2 5.3 68 66-133 39-116 (207)
216 COG4287 PqaA PhoPQ-activated p 96.6 0.015 3.2E-07 45.6 7.5 62 228-292 326-387 (507)
217 PF01083 Cutinase: Cutinase; 96.5 0.0076 1.7E-07 43.2 5.7 74 73-148 40-123 (179)
218 PLN02571 triacylglycerol lipas 96.5 0.0045 9.8E-08 49.8 4.9 37 96-132 208-246 (413)
219 PLN02454 triacylglycerol lipas 96.5 0.0051 1.1E-07 49.5 5.1 33 100-132 214-248 (414)
220 PF05576 Peptidase_S37: PS-10 96.3 0.0083 1.8E-07 47.8 5.0 103 43-147 61-169 (448)
221 PLN02408 phospholipase A1 96.3 0.0079 1.7E-07 47.7 4.9 36 98-133 184-221 (365)
222 PF05277 DUF726: Protein of un 96.2 0.02 4.3E-07 45.3 6.6 40 110-149 218-262 (345)
223 PLN02934 triacylglycerol lipas 96.1 0.011 2.4E-07 48.7 4.9 36 96-131 305-340 (515)
224 PLN02310 triacylglycerol lipas 96.0 0.021 4.5E-07 46.1 6.0 37 96-132 189-229 (405)
225 PLN02324 triacylglycerol lipas 95.9 0.015 3.3E-07 46.8 4.8 35 98-132 199-235 (415)
226 PF06850 PHB_depo_C: PHB de-po 95.9 0.12 2.5E-06 37.1 8.5 61 231-291 134-201 (202)
227 COG4947 Uncharacterized protei 95.9 0.025 5.3E-07 39.3 5.0 111 33-148 16-137 (227)
228 PLN02802 triacylglycerol lipas 95.7 0.021 4.5E-07 47.2 4.8 37 97-133 313-351 (509)
229 PLN02753 triacylglycerol lipas 95.6 0.025 5.3E-07 47.0 4.8 36 97-132 292-332 (531)
230 PLN03037 lipase class 3 family 95.5 0.027 5.8E-07 46.7 4.7 36 97-132 299-338 (525)
231 KOG1283 Serine carboxypeptidas 95.4 0.11 2.3E-06 40.2 7.4 124 25-148 7-167 (414)
232 PLN02719 triacylglycerol lipas 95.4 0.03 6.5E-07 46.3 4.8 35 98-132 279-318 (518)
233 PLN02761 lipase class 3 family 95.3 0.033 7.2E-07 46.2 4.8 35 97-131 273-313 (527)
234 PF07519 Tannase: Tannase and 95.0 0.37 8E-06 40.6 10.2 84 65-149 52-152 (474)
235 KOG4569 Predicted lipase [Lipi 94.8 0.054 1.2E-06 43.3 4.7 37 96-132 155-191 (336)
236 KOG4388 Hormone-sensitive lipa 94.6 0.19 4E-06 42.3 7.2 111 33-147 384-508 (880)
237 PLN02847 triacylglycerol lipas 94.4 0.083 1.8E-06 44.7 4.9 22 111-132 250-271 (633)
238 COG5153 CVT17 Putative lipase 92.6 0.29 6.4E-06 37.2 4.7 38 106-145 270-307 (425)
239 KOG4540 Putative lipase essent 92.6 0.29 6.4E-06 37.2 4.7 38 106-145 270-307 (425)
240 PF09949 DUF2183: Uncharacteri 92.3 1.9 4.2E-05 27.5 8.0 82 61-142 12-97 (100)
241 PF08237 PE-PPE: PE-PPE domain 92.3 0.88 1.9E-05 34.1 7.0 41 93-133 27-69 (225)
242 KOG2385 Uncharacterized conser 89.7 1.1 2.3E-05 37.4 5.7 42 109-150 444-490 (633)
243 KOG2029 Uncharacterized conser 89.6 0.74 1.6E-05 39.1 4.8 50 99-148 510-573 (697)
244 PF03283 PAE: Pectinacetyleste 88.7 12 0.00025 30.6 11.5 37 111-147 155-195 (361)
245 PRK12467 peptide synthase; Pro 87.4 3.7 7.9E-05 44.8 9.2 98 45-145 3692-3793(3956)
246 PF07519 Tannase: Tannase and 85.9 1.7 3.6E-05 36.8 4.9 63 231-293 353-428 (474)
247 PF09994 DUF2235: Uncharacteri 83.1 14 0.0003 28.9 8.6 22 111-132 91-112 (277)
248 PF06309 Torsin: Torsin; Inte 81.9 1.6 3.4E-05 29.1 2.6 20 42-62 49-68 (127)
249 smart00827 PKS_AT Acyl transfe 80.0 2.5 5.4E-05 33.3 3.7 29 103-131 73-101 (298)
250 PF00698 Acyl_transf_1: Acyl t 79.6 1.5 3.3E-05 34.9 2.3 30 102-131 74-103 (318)
251 TIGR03131 malonate_mdcH malona 78.9 2.9 6.3E-05 32.9 3.7 30 102-131 66-95 (295)
252 PRK10279 hypothetical protein; 76.8 4.2 9.2E-05 32.1 3.9 33 102-134 23-55 (300)
253 cd07225 Pat_PNPLA6_PNPLA7 Pata 76.2 4.6 0.0001 32.0 4.0 62 61-133 3-64 (306)
254 cd07198 Patatin Patatin-like p 76.2 5.2 0.00011 28.5 4.0 33 102-134 16-48 (172)
255 COG1448 TyrB Aspartate/tyrosin 76.0 42 0.00091 27.4 12.3 88 45-146 171-264 (396)
256 TIGR00128 fabD malonyl CoA-acy 75.1 4 8.6E-05 32.0 3.5 29 104-132 74-103 (290)
257 cd07207 Pat_ExoU_VipD_like Exo 74.8 5.5 0.00012 29.0 4.0 32 102-133 17-48 (194)
258 PF06792 UPF0261: Uncharacteri 73.9 34 0.00074 28.3 8.3 94 49-143 4-126 (403)
259 cd01714 ETF_beta The electron 73.0 24 0.00052 26.1 6.9 63 73-143 78-145 (202)
260 cd07227 Pat_Fungal_NTE1 Fungal 72.6 6.4 0.00014 30.5 3.9 33 101-133 27-59 (269)
261 KOG4389 Acetylcholinesterase/B 71.9 24 0.00051 29.9 7.0 116 30-147 119-255 (601)
262 cd07210 Pat_hypo_W_succinogene 71.7 7.8 0.00017 29.0 4.2 32 102-133 18-49 (221)
263 COG1752 RssA Predicted esteras 71.3 6.2 0.00014 31.3 3.8 33 101-133 28-60 (306)
264 PF10081 Abhydrolase_9: Alpha/ 70.5 8.4 0.00018 29.8 4.0 36 113-148 110-148 (289)
265 COG3933 Transcriptional antite 69.3 52 0.0011 27.6 8.3 75 44-129 108-182 (470)
266 cd07228 Pat_NTE_like_bacteria 68.5 9.3 0.0002 27.3 3.9 32 103-134 19-50 (175)
267 PF05576 Peptidase_S37: PS-10 67.8 3.7 8.1E-05 33.5 1.8 55 233-290 353-412 (448)
268 cd07230 Pat_TGL4-5_like Triacy 67.5 4.5 9.7E-05 33.7 2.3 37 102-138 91-127 (421)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 67.0 10 0.00023 28.2 4.0 33 102-134 16-48 (215)
270 PRK02399 hypothetical protein; 64.7 82 0.0018 26.2 9.8 95 49-143 6-128 (406)
271 COG1576 Uncharacterized conser 64.5 30 0.00065 24.1 5.3 57 64-129 59-115 (155)
272 cd07232 Pat_PLPL Patain-like p 64.1 6.1 0.00013 32.8 2.4 40 101-140 84-123 (407)
273 TIGR02816 pfaB_fam PfaB family 63.4 9.7 0.00021 32.9 3.5 31 103-133 255-286 (538)
274 COG4822 CbiK Cobalamin biosynt 63.3 60 0.0013 24.2 7.5 61 44-117 137-199 (265)
275 cd07229 Pat_TGL3_like Triacylg 62.3 7 0.00015 32.1 2.5 40 102-141 101-140 (391)
276 cd07205 Pat_PNPLA6_PNPLA7_NTE1 62.0 17 0.00036 26.0 4.2 32 102-133 18-49 (175)
277 PF03610 EIIA-man: PTS system 61.6 43 0.00093 21.9 8.7 73 47-131 2-77 (116)
278 cd07231 Pat_SDP1-like Sugar-De 61.6 9.1 0.0002 30.4 2.8 35 102-136 86-120 (323)
279 COG0279 GmhA Phosphoheptose is 59.8 29 0.00062 24.6 4.6 72 49-124 44-121 (176)
280 KOG2170 ATPase of the AAA+ sup 58.9 8.3 0.00018 30.2 2.2 19 43-62 107-125 (344)
281 cd07208 Pat_hypo_Ecoli_yjju_li 58.3 19 0.00041 27.9 4.2 34 102-135 16-50 (266)
282 PF10605 3HBOH: 3HB-oligomer h 54.6 9.8 0.00021 32.9 2.1 37 114-150 287-324 (690)
283 COG1073 Hydrolases of the alph 53.7 0.54 1.2E-05 36.6 -5.1 89 43-134 47-154 (299)
284 cd07224 Pat_like Patatin-like 52.8 27 0.00058 26.5 4.1 33 102-134 17-51 (233)
285 PF12242 Eno-Rase_NADH_b: NAD( 52.3 22 0.00049 21.3 2.8 24 110-133 38-61 (78)
286 PF11713 Peptidase_C80: Peptid 52.2 9.4 0.0002 26.8 1.5 44 81-124 62-116 (157)
287 KOG2872 Uroporphyrinogen decar 51.7 50 0.0011 25.9 5.1 68 45-120 252-336 (359)
288 PF08484 Methyltransf_14: C-me 51.3 62 0.0013 22.9 5.4 47 99-145 54-102 (160)
289 cd07206 Pat_TGL3-4-5_SDP1 Tria 50.7 26 0.00056 27.7 3.7 34 104-137 89-122 (298)
290 COG0529 CysC Adenylylsulfate k 50.6 44 0.00095 24.2 4.4 37 43-79 20-58 (197)
291 PRK00103 rRNA large subunit me 50.5 63 0.0014 22.8 5.3 52 65-124 60-111 (157)
292 PF00448 SRP54: SRP54-type pro 50.3 1E+02 0.0022 22.7 7.7 72 64-143 74-148 (196)
293 cd07212 Pat_PNPLA9 Patatin-lik 50.1 33 0.00072 27.4 4.4 19 115-133 35-53 (312)
294 PF02590 SPOUT_MTase: Predicte 50.1 26 0.00056 24.6 3.3 52 65-124 60-111 (155)
295 COG0218 Predicted GTPase [Gene 49.9 26 0.00055 25.7 3.3 59 229-291 133-198 (200)
296 COG4850 Uncharacterized conser 49.8 76 0.0016 25.4 5.9 48 99-146 265-314 (373)
297 PF14253 AbiH: Bacteriophage a 46.0 23 0.00049 27.4 2.9 17 110-126 233-249 (270)
298 cd07204 Pat_PNPLA_like Patatin 45.1 42 0.00092 25.6 4.1 20 115-134 34-53 (243)
299 cd01819 Patatin_and_cPLA2 Pata 44.5 47 0.001 23.2 4.0 28 103-130 17-46 (155)
300 COG3673 Uncharacterized conser 44.5 1.7E+02 0.0036 23.7 8.9 89 44-132 30-142 (423)
301 COG0331 FabD (acyl-carrier-pro 43.8 35 0.00076 27.2 3.6 22 110-131 83-104 (310)
302 PF10686 DUF2493: Protein of u 41.9 39 0.00084 20.0 2.7 25 45-72 31-55 (71)
303 PF00326 Peptidase_S9: Prolyl 41.3 63 0.0014 23.8 4.6 43 44-86 143-190 (213)
304 cd07218 Pat_iPLA2 Calcium-inde 41.1 53 0.0011 25.2 4.1 20 115-134 33-52 (245)
305 PRK06490 glutamine amidotransf 40.5 1.7E+02 0.0036 22.4 6.9 86 44-130 7-103 (239)
306 cd07221 Pat_PNPLA3 Patatin-lik 40.3 56 0.0012 25.2 4.1 22 113-134 33-54 (252)
307 cd00006 PTS_IIA_man PTS_IIA, P 40.1 1.1E+02 0.0024 20.3 8.3 70 47-128 3-74 (122)
308 PF05577 Peptidase_S28: Serine 39.8 41 0.00089 28.3 3.7 40 232-275 377-416 (434)
309 PRK04148 hypothetical protein; 39.5 67 0.0015 21.9 3.9 22 111-132 17-38 (134)
310 PF02230 Abhydrolase_2: Phosph 39.5 1.3E+02 0.0029 22.2 6.0 57 45-108 155-214 (216)
311 PRK05282 (alpha)-aspartyl dipe 39.2 86 0.0019 23.8 4.9 37 44-81 30-70 (233)
312 cd05312 NAD_bind_1_malic_enz N 39.1 69 0.0015 25.1 4.4 80 48-129 27-123 (279)
313 cd07220 Pat_PNPLA2 Patatin-lik 39.0 56 0.0012 25.1 4.0 22 113-134 37-58 (249)
314 PF01583 APS_kinase: Adenylyls 38.9 1.2E+02 0.0025 21.4 5.1 35 45-79 1-37 (156)
315 COG3887 Predicted signaling pr 38.9 90 0.002 27.4 5.3 47 99-146 323-377 (655)
316 PF06289 FlbD: Flagellar prote 38.6 71 0.0015 18.2 3.3 31 262-292 28-58 (60)
317 COG0518 GuaA GMP synthase - Gl 38.3 1.6E+02 0.0035 21.7 6.5 38 93-130 59-96 (198)
318 COG0159 TrpA Tryptophan syntha 38.2 1.5E+02 0.0033 23.1 6.0 70 46-130 96-167 (265)
319 COG3621 Patatin [General funct 38.0 92 0.002 25.1 4.9 54 70-134 6-64 (394)
320 PLN02748 tRNA dimethylallyltra 37.9 2.1E+02 0.0047 24.6 7.4 74 44-120 20-120 (468)
321 PF07521 RMMBL: RNA-metabolisi 37.5 63 0.0014 16.7 4.2 32 73-117 7-38 (43)
322 COG0541 Ffh Signal recognition 37.2 2.4E+02 0.0052 23.9 7.3 49 95-143 197-247 (451)
323 TIGR02069 cyanophycinase cyano 36.7 2E+02 0.0043 22.2 6.7 52 235-291 2-54 (250)
324 PF06500 DUF1100: Alpha/beta h 36.6 48 0.001 27.6 3.4 63 230-293 188-256 (411)
325 PF12641 Flavodoxin_3: Flavodo 36.6 1.5E+02 0.0032 21.0 5.5 58 233-291 41-98 (160)
326 cd07222 Pat_PNPLA4 Patatin-lik 36.1 62 0.0013 24.8 3.8 18 114-131 33-50 (246)
327 COG1092 Predicted SAM-dependen 34.9 1.5E+02 0.0033 24.7 6.0 49 72-121 290-338 (393)
328 COG2230 Cfa Cyclopropane fatty 33.8 1.1E+02 0.0024 24.1 4.8 48 96-144 55-105 (283)
329 PLN03019 carbonic anhydrase 33.7 78 0.0017 25.4 4.0 28 98-125 201-228 (330)
330 cd07211 Pat_PNPLA8 Patatin-lik 33.7 54 0.0012 26.1 3.3 17 115-131 44-60 (308)
331 TIGR03709 PPK2_rel_1 polyphosp 33.5 88 0.0019 24.4 4.2 67 44-121 54-123 (264)
332 COG2069 CdhD CO dehydrogenase/ 33.4 2.5E+02 0.0054 22.3 8.2 95 20-121 98-208 (403)
333 COG1087 GalE UDP-glucose 4-epi 33.2 2.4E+02 0.0051 22.7 6.3 86 64-150 15-123 (329)
334 KOG0781 Signal recognition par 33.1 2.2E+02 0.0047 24.6 6.4 85 50-143 443-538 (587)
335 COG3946 VirJ Type IV secretory 33.0 2.4E+02 0.0053 23.7 6.6 99 46-145 49-155 (456)
336 COG1506 DAP2 Dipeptidyl aminop 32.9 82 0.0018 28.2 4.5 45 43-87 549-598 (620)
337 cd08769 DAP_dppA_2 Peptidase M 32.6 2E+02 0.0043 22.6 5.9 57 228-291 144-202 (270)
338 PRK05579 bifunctional phosphop 32.2 3.1E+02 0.0067 23.1 8.5 73 45-119 116-196 (399)
339 PRK14729 miaA tRNA delta(2)-is 32.0 2.7E+02 0.0058 22.3 7.3 71 47-120 5-101 (300)
340 TIGR03707 PPK2_P_aer polyphosp 31.5 98 0.0021 23.5 4.1 68 44-123 29-100 (230)
341 cd00382 beta_CA Carbonic anhyd 31.1 70 0.0015 21.2 3.0 30 97-126 44-73 (119)
342 PF03976 PPK2: Polyphosphate k 31.1 49 0.0011 25.0 2.5 38 44-81 29-68 (228)
343 PF15566 Imm18: Immunity prote 31.0 64 0.0014 17.7 2.2 30 95-124 4-33 (52)
344 PF13207 AAA_17: AAA domain; P 30.9 58 0.0013 21.2 2.7 30 48-80 1-32 (121)
345 PRK00091 miaA tRNA delta(2)-is 30.7 2.7E+02 0.0059 22.3 6.6 62 45-109 3-89 (307)
346 TIGR01425 SRP54_euk signal rec 30.3 3.4E+02 0.0075 23.1 8.6 69 67-143 176-247 (429)
347 TIGR02683 upstrm_HI1419 probab 30.3 93 0.002 19.5 3.3 33 21-57 47-79 (95)
348 PRK05368 homoserine O-succinyl 30.1 87 0.0019 25.0 3.8 33 99-131 121-153 (302)
349 PRK05665 amidotransferase; Pro 30.0 1.3E+02 0.0027 23.1 4.6 36 95-130 73-108 (240)
350 PRK13728 conjugal transfer pro 29.8 1.9E+02 0.0042 21.0 5.2 55 22-83 54-110 (181)
351 PF12780 AAA_8: P-loop contain 29.7 2.5E+02 0.0055 21.9 6.2 52 51-112 36-87 (268)
352 TIGR00246 tRNA_RlmH_YbeA rRNA 29.6 1.2E+02 0.0026 21.3 4.1 52 64-125 58-109 (153)
353 PRK07877 hypothetical protein; 29.0 1E+02 0.0023 28.1 4.5 38 107-146 103-140 (722)
354 PF01734 Patatin: Patatin-like 28.9 60 0.0013 23.1 2.7 22 111-132 26-47 (204)
355 TIGR02813 omega_3_PfaA polyket 28.5 60 0.0013 34.5 3.3 30 102-131 664-693 (2582)
356 PF03490 Varsurf_PPLC: Variant 28.4 73 0.0016 17.2 2.1 27 93-119 6-32 (51)
357 PLN02840 tRNA dimethylallyltra 28.4 3.3E+02 0.0072 23.1 6.9 74 44-120 19-119 (421)
358 TIGR02873 spore_ylxY probable 28.3 69 0.0015 25.0 3.0 32 47-79 232-264 (268)
359 PLN02752 [acyl-carrier protein 28.3 64 0.0014 26.2 2.9 19 114-132 126-144 (343)
360 cd07217 Pat17_PNPLA8_PNPLA9_li 27.8 56 0.0012 26.6 2.5 18 115-132 44-61 (344)
361 KOG1202 Animal-type fatty acid 27.6 80 0.0017 30.7 3.5 24 101-124 571-594 (2376)
362 PLN03014 carbonic anhydrase 27.6 1.2E+02 0.0026 24.7 4.1 30 98-127 206-236 (347)
363 cd03379 beta_CA_cladeD Carboni 27.4 1E+02 0.0022 21.2 3.4 27 97-123 41-67 (142)
364 PF00004 AAA: ATPase family as 27.2 88 0.0019 20.5 3.1 31 49-82 1-33 (132)
365 KOG1252 Cystathionine beta-syn 27.1 3.5E+02 0.0076 22.1 7.6 52 31-82 193-249 (362)
366 TIGR02240 PHA_depoly_arom poly 27.1 2.9E+02 0.0064 21.2 7.5 59 232-293 26-89 (276)
367 PF06833 MdcE: Malonate decarb 27.0 1.4E+02 0.003 22.7 4.1 57 73-131 66-128 (234)
368 PF11009 DUF2847: Protein of u 26.9 1.8E+02 0.004 18.9 4.3 35 99-133 7-41 (105)
369 KOG2805 tRNA (5-methylaminomet 26.7 2.9E+02 0.0063 22.2 5.8 62 45-111 6-68 (377)
370 cd03131 GATase1_HTS Type 1 glu 26.4 35 0.00075 24.6 1.0 36 97-132 82-117 (175)
371 PRK14046 malate--CoA ligase su 26.3 72 0.0016 26.5 2.9 37 111-148 118-154 (392)
372 cd07213 Pat17_PNPLA8_PNPLA9_li 26.3 61 0.0013 25.5 2.4 19 115-133 37-55 (288)
373 COG4667 Predicted esterase of 26.3 82 0.0018 24.5 2.9 42 99-141 27-69 (292)
374 PRK03363 fixB putative electro 26.2 3.1E+02 0.0067 22.2 6.2 53 73-133 50-103 (313)
375 PRK14974 cell division protein 26.2 3.6E+02 0.0079 22.0 8.8 63 73-143 223-287 (336)
376 TIGR02764 spore_ybaN_pdaB poly 25.9 57 0.0012 23.7 2.1 32 47-79 153-188 (191)
377 cd01715 ETF_alpha The electron 25.7 2E+02 0.0043 20.4 4.7 53 73-133 53-106 (168)
378 PLN00416 carbonate dehydratase 25.2 1.8E+02 0.0038 22.7 4.6 29 98-126 126-154 (258)
379 KOG0744 AAA+-type ATPase [Post 25.2 1E+02 0.0022 24.9 3.3 31 47-80 178-208 (423)
380 PF01118 Semialdhyde_dh: Semia 25.0 93 0.002 20.5 2.8 32 113-145 1-33 (121)
381 KOG3551 Syntrophins (type beta 24.6 1E+02 0.0022 25.3 3.2 37 21-57 451-497 (506)
382 COG0482 TrmU Predicted tRNA(5- 24.4 2.9E+02 0.0063 22.7 5.7 61 44-111 3-64 (356)
383 PLN02777 photosystem I P subun 24.4 37 0.0008 23.8 0.8 61 83-144 64-124 (167)
384 TIGR03607 patatin-related prot 24.3 1E+02 0.0022 28.2 3.6 22 110-131 64-85 (739)
385 KOG1465 Translation initiation 24.1 2.6E+02 0.0057 22.3 5.2 33 46-79 163-195 (353)
386 TIGR02884 spore_pdaA delta-lac 24.1 1.1E+02 0.0023 23.1 3.3 33 46-79 187-221 (224)
387 COG2144 Selenophosphate synthe 24.0 3E+02 0.0066 21.9 5.5 32 120-151 216-247 (324)
388 KOG1752 Glutaredoxin and relat 24.0 2.1E+02 0.0046 18.5 5.7 74 44-133 13-90 (104)
389 PF02633 Creatininase: Creatin 23.7 2E+02 0.0044 21.8 4.8 68 63-131 43-120 (237)
390 PRK06731 flhF flagellar biosyn 23.5 3.7E+02 0.008 21.1 8.8 70 66-143 146-219 (270)
391 cd01012 YcaC_related YcaC rela 23.2 2.7E+02 0.0058 19.4 5.5 50 100-149 77-126 (157)
392 PRK14194 bifunctional 5,10-met 23.2 1.6E+02 0.0035 23.5 4.1 34 99-132 143-182 (301)
393 PRK15180 Vi polysaccharide bio 23.1 2.4E+02 0.0053 24.3 5.2 76 46-121 97-198 (831)
394 cd00762 NAD_bind_malic_enz NAD 23.0 1.4E+02 0.0031 23.1 3.7 56 73-130 60-125 (254)
395 cd01985 ETF The electron trans 23.0 2.9E+02 0.0063 19.8 5.3 53 73-133 61-114 (181)
396 PRK00131 aroK shikimate kinase 22.9 1E+02 0.0023 21.6 3.0 32 45-79 3-36 (175)
397 KOG3086 Predicted dioxygenase 22.8 2.3E+02 0.005 21.8 4.5 57 93-149 17-81 (296)
398 PF00862 Sucrose_synth: Sucros 22.7 2.4E+02 0.0052 24.5 5.1 39 95-133 383-423 (550)
399 cd00883 beta_CA_cladeA Carboni 22.7 1.3E+02 0.0028 21.8 3.3 30 98-127 67-96 (182)
400 KOG2316 Predicted ATPase (PP-l 22.5 2.5E+02 0.0053 21.3 4.6 62 66-127 56-119 (277)
401 PRK06762 hypothetical protein; 22.1 1.3E+02 0.0027 21.1 3.2 14 46-59 2-15 (166)
402 COG4075 Uncharacterized conser 22.1 2.2E+02 0.0048 18.1 4.3 55 62-119 16-72 (110)
403 COG3657 Uncharacterized protei 22.0 2E+02 0.0043 18.3 3.4 33 19-55 48-80 (100)
404 TIGR02354 thiF_fam2 thiamine b 22.0 2.3E+02 0.0049 21.0 4.5 40 104-146 14-54 (200)
405 PF01738 DLH: Dienelactone hyd 21.9 3.3E+02 0.0072 20.1 7.5 66 44-109 144-214 (218)
406 cd03145 GAT1_cyanophycinase Ty 21.7 3.5E+02 0.0077 20.2 6.8 37 234-270 2-39 (217)
407 PF00484 Pro_CA: Carbonic anhy 21.6 2.3E+02 0.0049 19.6 4.4 33 95-127 38-70 (153)
408 TIGR02883 spore_cwlD N-acetylm 21.3 2.5E+02 0.0055 20.4 4.7 13 75-88 2-14 (189)
409 TIGR00064 ftsY signal recognit 21.1 4.1E+02 0.009 20.8 8.2 66 70-143 152-225 (272)
410 cd07216 Pat17_PNPLA8_PNPLA9_li 21.0 67 0.0014 25.6 1.8 17 115-131 45-61 (309)
411 cd01014 nicotinamidase_related 21.0 2.5E+02 0.0054 19.5 4.4 48 100-147 88-135 (155)
412 cd07219 Pat_PNPLA1 Patatin-lik 20.9 1.6E+02 0.0035 24.4 3.8 19 114-132 46-64 (382)
413 KOG0743 AAA+-type ATPase [Post 20.9 3.1E+02 0.0068 23.4 5.4 29 50-81 239-269 (457)
414 cd07199 Pat17_PNPLA8_PNPLA9_li 20.6 1.9E+02 0.0041 22.3 4.1 18 115-132 37-54 (258)
415 PF11022 DUF2611: Protein of u 20.6 92 0.002 18.5 1.8 21 279-299 51-71 (71)
416 PRK14527 adenylate kinase; Pro 20.6 81 0.0017 22.9 2.0 28 44-74 4-31 (191)
417 PF07931 CPT: Chloramphenicol 20.5 1.3E+02 0.0029 21.6 3.0 33 47-79 2-35 (174)
418 COG0426 FpaA Uncharacterized f 20.3 5.2E+02 0.011 21.7 7.3 80 47-146 250-339 (388)
419 PF09825 BPL_N: Biotin-protein 20.3 4.1E+02 0.009 22.0 5.9 77 48-129 3-98 (367)
420 PF03681 UPF0150: Uncharacteri 20.2 1.5E+02 0.0033 15.5 2.5 31 73-108 14-44 (48)
421 COG0324 MiaA tRNA delta(2)-iso 20.1 4.7E+02 0.01 21.1 7.5 74 45-121 2-102 (308)
422 KOG1411 Aspartate aminotransfe 20.0 3.5E+02 0.0075 22.3 5.2 87 46-145 198-290 (427)
423 PF10443 RNA12: RNA12 protein; 20.0 1.5E+02 0.0032 25.0 3.4 70 44-125 15-86 (431)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.9e-41 Score=260.82 Aligned_cols=266 Identities=19% Similarity=0.201 Sum_probs=183.6
Q ss_pred CcccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC-------CC
Q 022253 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-------PD 92 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-------~~ 92 (300)
..+.++++. +|.+++|...|. ++++|||+||+++++. .|..+++.|+++|+|+++|+||||.|+.+. ..
T Consensus 7 ~~~~~~~~~-~~~~i~y~~~G~--~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~ 82 (294)
T PLN02824 7 QVETRTWRW-KGYNIRYQRAGT--SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSF 82 (294)
T ss_pred CCCCceEEE-cCeEEEEEEcCC--CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccccccccc
Confidence 455677888 799999988774 4589999999999999 999999999988999999999999998754 24
Q ss_pred CChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccC-
Q 022253 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLL- 171 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (300)
++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++....................+...+.
T Consensus 83 ~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (294)
T PLN02824 83 YTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRE 162 (294)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhc
Confidence 8899999999999999999999999999999999999999999999999999864321100000000000000000000
Q ss_pred ----------cccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhh-c---ccCCCCCCCcceEEEE
Q 022253 172 ----------PKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVI-S---DKEFSIPHFSQKIHLL 237 (300)
Q Consensus 172 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~i~~P~l~i 237 (300)
..........+.................+...... ......+..+.. . .....+.++++|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 240 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE--PGAVDVFLDFISYSGGPLPEELLPAVKCPVLIA 240 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC--chHHHHHHHHhccccccchHHHHhhcCCCeEEE
Confidence 00011111222111111111222222221111100 111111111111 0 1124567899999999
Q ss_pred eeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 238 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 238 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+|++|.+++.+.++.+.+..+ ++++++++++||++++|+|+++++.|.+|++++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 241 WGEKDPWEPVELGRAYANFDA-VEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred EecCCCCCChHHHHHHHhcCC-ccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999988877665 789999999999999999999999999999764
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=7.7e-40 Score=252.52 Aligned_cols=265 Identities=18% Similarity=0.152 Sum_probs=183.2
Q ss_pred ceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 103 (300)
+++++ +|.+++|+..+...++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|+.+...++++.+++++.
T Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~ 82 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPGKEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAA 82 (276)
T ss_pred EEecc-CCcEEEEEEecCCCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHH
Confidence 45666 789999977543235589999999999999 9999999998889999999999999987766788999999999
Q ss_pred HHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCcc-chhhhhh-ccchhhhhhccCcccHHHHHHH
Q 022253 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNAALE-RIGYESWVDFLLPKTADALKVQ 181 (300)
Q Consensus 104 ~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 181 (300)
++++.++.++++|+||||||.+++.+|.++|++|+++|++++....... ....... ........... .........
T Consensus 83 ~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 160 (276)
T TIGR02240 83 RMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS--HGIHIAPDI 160 (276)
T ss_pred HHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc--cccchhhhh
Confidence 9999999999999999999999999999999999999999987642110 0000000 00000000000 000000000
Q ss_pred HHHhhccCCCChHHHHHHHHHHHhcchh--hHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCC
Q 022253 182 FDIACYKLPTLPAFVYKHILEALSDHRK--ERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQ 259 (300)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 259 (300)
+. ......+............... ........ ........+.++++|+++|+|++|++++++..+.+.+.++
T Consensus 161 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~- 234 (276)
T TIGR02240 161 YG----GAFRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP- 234 (276)
T ss_pred cc----ceeeccchhhhhhhhhcccCCCchHHHHHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC-
Confidence 00 0000011111111111111000 01111111 1111124467899999999999999999999999999998
Q ss_pred CceEEEEcCCCCcccccChHHHHHHHHHHHhhcccccCCC
Q 022253 260 NATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANGQH 299 (300)
Q Consensus 260 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~~~ 299 (300)
+++++++++ ||+++.++|+++++.|.+|+++..++.-.|
T Consensus 235 ~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~~~~~~ 273 (276)
T TIGR02240 235 NAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQRAVMH 273 (276)
T ss_pred CCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhhhccCC
Confidence 899999985 999999999999999999999887665444
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.2e-38 Score=246.02 Aligned_cols=266 Identities=16% Similarity=0.161 Sum_probs=178.5
Q ss_pred CcccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHH
Q 022253 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQA 99 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~ 99 (300)
+++.++++. +|.+++|...| ++++|||+||++++.. .|..+++.|+++++|+++|+||||.|+.+...++.+.++
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G---~g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a 80 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETG---EGDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHA 80 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeC---CCCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 344566667 79999998877 4689999999999999 999999999988999999999999999877778999999
Q ss_pred HHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCcc--chhhhhhccchhhhhhcc-CcccHH
Q 022253 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES--VSNAALERIGYESWVDFL-LPKTAD 176 (300)
Q Consensus 100 ~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~ 176 (300)
+|+.++++.++.++++++|||+||.+|+.+|.++|++|+++|++++....... ........ ...+.... ......
T Consensus 81 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 158 (295)
T PRK03592 81 RYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVREL--FQALRSPGEGEEMVL 158 (295)
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHH--HHHHhCccccccccc
Confidence 99999999999999999999999999999999999999999999985332110 00000000 00000000 000000
Q ss_pred HHHHHHHHhhcc--CCCChHHHHHHHHHHHhcchhhH---HHHHHHh-----------hhcccCCCCCCCcceEEEEeeC
Q 022253 177 ALKVQFDIACYK--LPTLPAFVYKHILEALSDHRKER---IELLQAL-----------VISDKEFSIPHFSQKIHLLWGE 240 (300)
Q Consensus 177 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~ 240 (300)
....+....... .....++....+...... .... ..+...+ ...+....+.++++|+++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 159 EENVFIERVLPGSILRPLSDEEMAVYRRPFPT-PESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred chhhHHhhcccCcccccCCHHHHHHHHhhcCC-chhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 000011100000 011122222222111110 0000 0000000 0011123467889999999999
Q ss_pred CCcccCHHHHHHH-HHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhccc
Q 022253 241 NDKIFDMQVARNL-KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 241 ~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
+|.++++.....+ .+..+ ++++++++++||+++.|+|+++++.|.+|+++...
T Consensus 238 ~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWPN-QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred CCcccCcHHHHHHHHHhhh-hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 9999955544444 44555 89999999999999999999999999999987654
No 4
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=6.7e-38 Score=231.80 Aligned_cols=274 Identities=19% Similarity=0.275 Sum_probs=193.8
Q ss_pred ccccCcccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC--CC
Q 022253 16 LKLVGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PD 92 (300)
Q Consensus 16 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~ 92 (300)
....+++.++++. +|++++|.+.+. +++|.|+++||++.+.. .|+.++..|+.. |+|+++|+||+|.|+.|. ..
T Consensus 17 ~~~~~~~hk~~~~-~gI~~h~~e~g~-~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~ 93 (322)
T KOG4178|consen 17 LNLSAISHKFVTY-KGIRLHYVEGGP-GDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISE 93 (322)
T ss_pred cChhhcceeeEEE-ccEEEEEEeecC-CCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcce
Confidence 3455778888888 689999987765 68999999999999999 999999999999 999999999999999887 45
Q ss_pred CChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhc-cc---------
Q 022253 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALER-IG--------- 162 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~-~~--------- 162 (300)
++...++.|+..+++.++.++++++||+|||++|+.+|..+|++|+++|+++.+...+.......... ..
T Consensus 94 Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 94 YTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQ 173 (322)
T ss_pred eeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecc
Confidence 99999999999999999999999999999999999999999999999999998766211110000000 00
Q ss_pred hhhhhhccC-cccHHHHHHHHHH-hhc-----------cCCCChHHHHHHHHHHHh-cchhhHHHHHHHhhhcc--cCCC
Q 022253 163 YESWVDFLL-PKTADALKVQFDI-ACY-----------KLPTLPAFVYKHILEALS-DHRKERIELLQALVISD--KEFS 226 (300)
Q Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~ 226 (300)
.....+... ....+.+...+.. ... .+.|..++..+.+..... .........++.+.... ....
T Consensus 174 ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~ 253 (322)
T KOG4178|consen 174 EPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWA 253 (322)
T ss_pred ccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccc
Confidence 000000000 0001111111110 000 012333333333333222 22333344444444433 2456
Q ss_pred CCCCcceEEEEeeCCCcccCHH-HHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 227 IPHFSQKIHLLWGENDKIFDMQ-VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 227 ~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+.++++|+++|+|+.|.+.+.. ..+.+.+.++...+.++++|+||+++.|+|+++++.|.+|+++.
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 7789999999999999998876 45555566663448899999999999999999999999999875
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.3e-38 Score=249.17 Aligned_cols=265 Identities=25% Similarity=0.307 Sum_probs=176.8
Q ss_pred ceeecCCCe-EEEEEccCCC---CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC-CCCChHHH
Q 022253 24 RTIEIEPGT-ILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQ 98 (300)
Q Consensus 24 ~~i~~~~g~-~l~~~~~~~~---~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~ 98 (300)
+++.. +|. +++|...|+. +.+|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+. ..++.+.+
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETW 141 (360)
T ss_pred ceEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHH
Confidence 34455 455 9999887741 14589999999999999 999999999888999999999999998764 35789999
Q ss_pred HHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH-hCcccccceEEEcccCCCCccc--hhhhhhc-cchhhhhhccC---
Q 022253 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE-MYPDLVESMVVTCSVMGLTESV--SNAALER-IGYESWVDFLL--- 171 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~-~~p~~v~~~vl~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~--- 171 (300)
++++.++++.++.++++|+||||||.+++.++. .+|++|+++|++++........ ....... .........+.
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999999999999999999999999999999887 4799999999999865322110 0000000 00000000000
Q ss_pred ---------cccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhh----cccCCCCCCCcceEEEEe
Q 022253 172 ---------PKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVI----SDKEFSIPHFSQKIHLLW 238 (300)
Q Consensus 172 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~ 238 (300)
......++..+...........+.....+. ........ ...+..... .+....+.++++|+|+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~ 299 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIR-GPADDEGA-LDAFVSIVTGPPGPNPIKLIPRISLPILVLW 299 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHH-hhccCCCh-HHHHHHHHhcCCCCCHHHHhhhcCCCEEEEE
Confidence 000111222222111122222233222221 11111111 111111111 111245678999999999
Q ss_pred eCCCcccCHHH-----HHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhcc
Q 022253 239 GENDKIFDMQV-----ARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 293 (300)
Q Consensus 239 g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 293 (300)
|++|.++|.+. .+.+.+.++ ++++++++++||++++|+|+++++.|.+||++..
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 99999998763 234566677 8999999999999999999999999999998754
No 6
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.6e-37 Score=235.39 Aligned_cols=248 Identities=16% Similarity=0.142 Sum_probs=162.8
Q ss_pred EEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcc
Q 022253 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (300)
Q Consensus 34 l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 113 (300)
++|...|. +.|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.+. .++.+++++++. .+..++
T Consensus 4 ~~y~~~G~--g~~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQ--GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----QQAPDK 75 (256)
T ss_pred cchhhcCC--CCCeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----hcCCCC
Confidence 55665553 3357999999999999 999999999988999999999999998643 467776666654 356789
Q ss_pred eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCCh
Q 022253 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLP 193 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (300)
++++||||||.+++.+|.++|++|+++|++++.+..................+...+..........++...........
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 99999999999999999999999999999988644321100000000000000000000001111122211111111111
Q ss_pred HHHHHHHHHHHhcc-hh---hHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCC
Q 022253 194 AFVYKHILEALSDH-RK---ERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 269 (300)
Q Consensus 194 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (300)
.....+....... .. ........+...+....+.++++|+++|+|++|.++|.+..+.+.+.++ ++++++++++
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-~~~~~~i~~~ 233 (256)
T PRK10349 156 -QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKA 233 (256)
T ss_pred -HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-CCeEEEeCCC
Confidence 1111111111110 00 1111111222233445678899999999999999999999999999888 9999999999
Q ss_pred CCcccccChHHHHHHHHHHHhh
Q 022253 270 GHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 270 gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
||++++|+|++|++.|.+|-++
T Consensus 234 gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 234 AHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999999754
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.9e-37 Score=239.89 Aligned_cols=260 Identities=17% Similarity=0.174 Sum_probs=174.0
Q ss_pred cccceeecCCC-----eEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC--CC
Q 022253 21 MTQRTIEIEPG-----TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PD 92 (300)
Q Consensus 21 ~~~~~i~~~~g-----~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~ 92 (300)
+..+++++. | .+++|...|. +++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+. ..
T Consensus 19 ~~~~~~~~~-~~~~~~~~i~y~~~G~-~~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~ 95 (302)
T PRK00870 19 FAPHYVDVD-DGDGGPLRMHYVDEGP-ADGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRRED 95 (302)
T ss_pred CCceeEeec-CCCCceEEEEEEecCC-CCCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCccc
Confidence 466777774 5 7899988765 35789999999999999 999999999876 999999999999998654 34
Q ss_pred CChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCc
Q 022253 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (300)
++.+++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++................ ......
T Consensus 96 ~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-----~~~~~~ 170 (302)
T PRK00870 96 YTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAW-----RAFSQY 170 (302)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhh-----hccccc
Confidence 789999999999999999999999999999999999999999999999999875332111000000000 000000
Q ss_pred ccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcc-hhhHHHHHHHh-----------hhcccCCCCCCCcceEEEEeeC
Q 022253 173 KTADALKVQFDIACYKLPTLPAFVYKHILEALSDH-RKERIELLQAL-----------VISDKEFSIPHFSQKIHLLWGE 240 (300)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~i~~P~l~i~g~ 240 (300)
............. ............+....... ..........+ ........+.++++|+++|+|+
T Consensus 171 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 248 (302)
T PRK00870 171 SPVLPVGRLVNGG--TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSD 248 (302)
T ss_pred CchhhHHHHhhcc--ccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecC
Confidence 0000000000000 00001111111110000000 00000000000 0000112467899999999999
Q ss_pred CCcccCHHHHHHHHHHhCCCce---EEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 241 NDKIFDMQVARNLKEQVGQNAT---MESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+|++++.+. +.+.+.++ +.+ +.+++++||++++|+|+++++.|.+|++++
T Consensus 249 ~D~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 249 SDPITGGGD-AILQKRIP-GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CCCcccCch-HHHHhhcc-cccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 999999766 88888887 665 889999999999999999999999999865
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.1e-37 Score=235.65 Aligned_cols=259 Identities=15% Similarity=0.193 Sum_probs=170.7
Q ss_pred cccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCC-CCChHHHH
Q 022253 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~ 99 (300)
++.+++++ +|.+++|...| ++++|||+||++.+.. .|..+++.|.+.|+|+++|+||||.|+.+.. .++.++++
T Consensus 14 ~~~~~~~~-~~~~i~y~~~G---~~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 88 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDEG---TGPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHA 88 (286)
T ss_pred ccceEEEc-CCcEEEEEECC---CCCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHH
Confidence 56677888 68899998776 3689999999998888 9999999998889999999999999987653 57889999
Q ss_pred HHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchh-hhhhccCcccHHHH
Q 022253 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE-SWVDFLLPKTADAL 178 (300)
Q Consensus 100 ~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 178 (300)
+++.+++++++.++++++||||||.+++.++..+|++|+++|++++................... .....+. ......
T Consensus 89 ~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 167 (286)
T PRK03204 89 RVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAIL-RRNFFV 167 (286)
T ss_pred HHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhh-hhhHHH
Confidence 99999999999999999999999999999999999999999998875422111000000000000 0000000 000000
Q ss_pred HHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHH---HHHhhh-----cccCCCCC--CCcceEEEEeeCCCcccCHH
Q 022253 179 KVQFDIACYKLPTLPAFVYKHILEALSDHRKERIEL---LQALVI-----SDKEFSIP--HFSQKIHLLWGENDKIFDMQ 248 (300)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~--~i~~P~l~i~g~~D~~~~~~ 248 (300)
...+.... ....++.....+. ............ ...+.. ......+. .+++|+++|+|++|.++++.
T Consensus 168 ~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~ 244 (286)
T PRK03204 168 ERLIPAGT--EHRPSSAVMAHYR-AVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPK 244 (286)
T ss_pred HHhccccc--cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcH
Confidence 11110000 0011111111111 000000000000 000000 00000111 12899999999999988654
Q ss_pred -HHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHH
Q 022253 249 -VARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTIL 289 (300)
Q Consensus 249 -~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 289 (300)
..+.+.+.++ +.++++++++||++++|+|+++++.|.+|+
T Consensus 245 ~~~~~~~~~ip-~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 245 TILPRLRATFP-DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHHHhcC-CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 5788889998 899999999999999999999999999997
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=3.7e-36 Score=233.41 Aligned_cols=254 Identities=18% Similarity=0.248 Sum_probs=165.5
Q ss_pred CeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHH---HHhhhcC-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 022253 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQ---VLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKG 105 (300)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~---~~~l~~~-~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~ 105 (300)
|.+++|...+ ++|+|||+||++.+.. .|..+ +..|.+. |+|+++|+||||.|+.+... .....+++++.++
T Consensus 19 ~~~~~y~~~g---~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 19 NFRIHYNEAG---NGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred ceeEEEEecC---CCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 4678888765 4678999999998877 77543 4455555 99999999999999865422 2222568999999
Q ss_pred HHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHh
Q 022253 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIA 185 (300)
Q Consensus 106 i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (300)
++.++.++++++||||||.+++.+|.++|++++++|++++.............. ....................+...
T Consensus 95 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
T TIGR03343 95 MDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPME--GIKLLFKLYAEPSYETLKQMLNVF 172 (282)
T ss_pred HHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchH--HHHHHHHHhcCCCHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999763211100000000 000000000011111122222111
Q ss_pred hccCCCChHHHHHHHHHHHhcchhhHHHHHHH-----hhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCC
Q 022253 186 CYKLPTLPAFVYKHILEALSDHRKERIELLQA-----LVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQN 260 (300)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 260 (300)
............+................... ....+....+.++++|+++++|++|.+++++..+.+.+.++ +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-~ 251 (282)
T TIGR03343 173 LFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-D 251 (282)
T ss_pred ccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC-C
Confidence 11121222222211111111111111111110 00111223567899999999999999999999999999998 9
Q ss_pred ceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 261 ATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 261 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
+++++++++||+++.|+|+++++.|.+|+++
T Consensus 252 ~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 252 AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999963
No 10
>PLN02578 hydrolase
Probab=100.00 E-value=4.5e-36 Score=238.42 Aligned_cols=258 Identities=22% Similarity=0.317 Sum_probs=177.0
Q ss_pred eeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 022253 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (300)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 104 (300)
++.. +|.+++|...| ++++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++++.+
T Consensus 70 ~~~~-~~~~i~Y~~~g---~g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~ 144 (354)
T PLN02578 70 FWTW-RGHKIHYVVQG---EGLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVAD 144 (354)
T ss_pred EEEE-CCEEEEEEEcC---CCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHH
Confidence 3444 68899998876 4688999999999998 99999999988899999999999999988777899999999999
Q ss_pred HHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhh---------hhhccchhhhhhc------
Q 022253 105 GLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---------ALERIGYESWVDF------ 169 (300)
Q Consensus 105 ~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~---------~~~~~~~~~~~~~------ 169 (300)
+++.+..++++++|||+||.+++.+|.++|++|+++|++++........... .............
T Consensus 145 ~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (354)
T PLN02578 145 FVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVL 224 (354)
T ss_pred HHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHH
Confidence 9999998999999999999999999999999999999998765432111000 0000000000000
Q ss_pred ----cCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhH---HHHHHHhh----hcccCCCCCCCcceEEEEe
Q 022253 170 ----LLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKER---IELLQALV----ISDKEFSIPHFSQKIHLLW 238 (300)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~i~~P~l~i~ 238 (300)
.......................++......... ....... ......+. ..+....+.++++|+++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 303 (354)
T PLN02578 225 GFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEP-AADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLW 303 (354)
T ss_pred HHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhc-ccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEE
Confidence 0000001111111111111111111111111110 0111111 11111111 1112245678999999999
Q ss_pred eCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHh
Q 022253 239 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 239 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 290 (300)
|++|.+++.+.++.+.+.++ +++++++ ++||+++.|+|+++++.|.+|++
T Consensus 304 G~~D~~v~~~~~~~l~~~~p-~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 304 GDLDPWVGPAKAEKIKAFYP-DTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred eCCCCCCCHHHHHHHHHhCC-CCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999998 8999999 58999999999999999999986
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=4.5e-36 Score=232.68 Aligned_cols=258 Identities=17% Similarity=0.140 Sum_probs=177.0
Q ss_pred ceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCC-CCChHHHHHHH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP-DRTASFQAECM 102 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~ 102 (300)
+.+++ +|.+++|...+. .++|+|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+.. .++++.+++|+
T Consensus 9 ~~~~~-~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 9 RRVTV-GPFHWHVQDMGP-TAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred ceeeE-CCEEEEEEecCC-CCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 45556 799999988765 35789999999999999 9999999998889999999999999987665 68999999999
Q ss_pred HHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhh---hhhcc----c-hhhhhhccCccc
Q 022253 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---ALERI----G-YESWVDFLLPKT 174 (300)
Q Consensus 103 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~---~~~~~----~-~~~~~~~~~~~~ 174 (300)
.++++.++.++++++||||||.+++.+|.++|+++++++++++........... ..... . ......... ..
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGA-AD 164 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhc-cc
Confidence 999999998999999999999999999999999999999998764321110000 00000 0 000000000 00
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhh---hcccCCCCCCCcceEEEEeeCCCcccCHHHHH
Q 022253 175 ADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALV---ISDKEFSIPHFSQKIHLLWGENDKIFDMQVAR 251 (300)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 251 (300)
.......... ........... +.................+. .......++++++|+++|+|++|.++|.+..+
T Consensus 165 ~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~ 240 (278)
T TIGR03056 165 QQRVERLIRD---TGSLLDKAGMT-YYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESK 240 (278)
T ss_pred CcchhHHhhc---cccccccchhh-HHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHH
Confidence 0001111100 00001111111 11111111100111111111 11112356789999999999999999999999
Q ss_pred HHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHh
Q 022253 252 NLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 290 (300)
.+.+.++ +++++.++++||+++.++|+++++.|.+|++
T Consensus 241 ~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 241 RAATRVP-TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHhcc-CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9998887 8999999999999999999999999999984
No 12
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-36 Score=238.25 Aligned_cols=260 Identities=18% Similarity=0.174 Sum_probs=168.6
Q ss_pred CCeEEEEEccCCCCC-------CceEEEEcCCCCCchhhHH--HHHHhh--------hcCceEEeecCCCCCCCCCCCC-
Q 022253 30 PGTILNIWVPKKTTK-------KHAVVLLHPFGFDGILTWQ--FQVLAL--------AKTYEVYVPDFLFFGSSVTDRP- 91 (300)
Q Consensus 30 ~g~~l~~~~~~~~~~-------~~~vv~lhG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~G~G~s~~~~~- 91 (300)
+|.+++|...|. +. +|+|||+||++++.. .|. .+.+.| +++|+|+++|+||||.|+.+..
T Consensus 48 ~g~~i~y~~~G~-~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 48 PELRLHYTTLGT-PHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CCceEEEEecCC-CCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 788999998875 23 789999999999987 775 454444 5559999999999999986543
Q ss_pred ------CCChHHHHHHHHHHH-HHhCCcceE-EEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccch
Q 022253 92 ------DRTASFQAECMAKGL-RKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (300)
Q Consensus 92 ------~~~~~~~~~~~~~~i-~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 163 (300)
.++++++++++.+++ +++++++++ ++||||||.+|+.+|.++|++|+++|++++.+........ .......
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~-~~~~~~~ 204 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNW-MWRRMLI 204 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHH-HHHHHHH
Confidence 478899999988854 889999985 8999999999999999999999999999876432111100 0000000
Q ss_pred hhhhh---c---cCcccHHHHHHHHHHh----------h-ccCCC--ChHHHHHHHHHHHhcc-hhhHHHHHHHhhhccc
Q 022253 164 ESWVD---F---LLPKTADALKVQFDIA----------C-YKLPT--LPAFVYKHILEALSDH-RKERIELLQALVISDK 223 (300)
Q Consensus 164 ~~~~~---~---~~~~~~~~~~~~~~~~----------~-~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 223 (300)
..... . ................ . ..... ................ ..............+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 284 (360)
T PRK06489 205 ESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNP 284 (360)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccCh
Confidence 00000 0 0000011111111000 0 00000 0011111111111111 1111111111122233
Q ss_pred CCCCCCCcceEEEEeeCCCcccCHHHH--HHHHHHhCCCceEEEEcCC----CCcccccChHHHHHHHHHHHhhccc
Q 022253 224 EFSIPHFSQKIHLLWGENDKIFDMQVA--RNLKEQVGQNATMESIEKA----GHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 224 ~~~~~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
...+.+|++|+|+|+|++|.++|++.. +.+.+.++ ++++++++++ ||.++ ++|+++++.|.+||+++..
T Consensus 285 ~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 285 SPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 456788999999999999999998875 78899998 9999999996 99997 8999999999999987653
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=232.71 Aligned_cols=261 Identities=13% Similarity=0.119 Sum_probs=173.9
Q ss_pred eeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCC----CCChHHHHH
Q 022253 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP----DRTASFQAE 100 (300)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~----~~~~~~~~~ 100 (300)
.....+|.+++|...|+ .++++|||+||++++.. .|+.+++.|++.|+|+++|+||||.|+.+.. .++.+.+++
T Consensus 108 ~~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~ 185 (383)
T PLN03084 108 SQASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVS 185 (383)
T ss_pred eEEcCCceEEEEEecCC-CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHH
Confidence 33345899999998775 35789999999999999 9999999998889999999999999987653 479999999
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHH
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (300)
++.+++++++.++++|+|||+||.+++.+|.++|++|+++|+++++.......................+..........
T Consensus 186 ~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~ 265 (383)
T PLN03084 186 SLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDK 265 (383)
T ss_pred HHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhh
Confidence 99999999999999999999999999999999999999999999875321100000000000000000000000000000
Q ss_pred HHHHhhccCCCChHHHHHHHHHHHhcchh---hHHHHHHHhhhc------ccC--CCCCCCcceEEEEeeCCCcccCHHH
Q 022253 181 QFDIACYKLPTLPAFVYKHILEALSDHRK---ERIELLQALVIS------DKE--FSIPHFSQKIHLLWGENDKIFDMQV 249 (300)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~~--~~~~~i~~P~l~i~g~~D~~~~~~~ 249 (300)
.+.. .......++....+......... ........+... ... ....++++|+++|+|++|.+++.+.
T Consensus 266 ~~~~--~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~ 343 (383)
T PLN03084 266 ALTS--CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDG 343 (383)
T ss_pred hhcc--cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHH
Confidence 0000 00001111111111111110000 000011111100 000 0113579999999999999999998
Q ss_pred HHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 250 ARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
.+.+.+. . +.++++++++||+++.|+|+++++.|.+|+..
T Consensus 344 ~~~~a~~-~-~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 344 VEDFCKS-S-QHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHHHh-c-CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8888886 4 78999999999999999999999999999863
No 14
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=3e-36 Score=239.49 Aligned_cols=265 Identities=17% Similarity=0.161 Sum_probs=172.8
Q ss_pred cceeecCCCeEEEEEccCCC--CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCC-CChHHH
Q 022253 23 QRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQ 98 (300)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~--~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~-~~~~~~ 98 (300)
+.++...+|.+++|..+++. +.+++|||+||++++....|..+++.|++. |+|+++|+||||.|+.+... .+++++
T Consensus 63 ~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 63 ESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred eeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHH
Confidence 34455569999998776542 356899999999988651468889999876 99999999999999875432 588999
Q ss_pred HHHHHHHHHHhCCc------ceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchh-hhhhccchhhhhhccC
Q 022253 99 AECMAKGLRKLGVE------KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERIGYESWVDFLL 171 (300)
Q Consensus 99 ~~~~~~~i~~~~~~------~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 171 (300)
++|+.++++.+..+ +++|+||||||.+++.++.++|++++++|+++|.......... ...... ....... .
T Consensus 143 ~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~-~~~~~~~-~ 220 (349)
T PLN02385 143 VDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQI-LILLANL-L 220 (349)
T ss_pred HHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHH-HHHHHHH-C
Confidence 99999999887542 7999999999999999999999999999999987643221100 000000 0000000 0
Q ss_pred cccHHHHHHHHHHhhccCCCChHHHHHHHHH---HHhcchhhHHHHHHHhhh-cccCCCCCCCcceEEEEeeCCCcccCH
Q 022253 172 PKTADALKVQFDIACYKLPTLPAFVYKHILE---ALSDHRKERIELLQALVI-SDKEFSIPHFSQKIHLLWGENDKIFDM 247 (300)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D~~~~~ 247 (300)
+... ...........+.......... ...............+.. .+....+.++++|+|+|+|++|.+++.
T Consensus 221 p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 221 PKAK-----LVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred CCce-----ecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 0000 0000000000000000000000 000000000011111110 122345778999999999999999999
Q ss_pred HHHHHHHHHhC-CCceEEEEcCCCCcccccChHH----HHHHHHHHHhhccc
Q 022253 248 QVARNLKEQVG-QNATMESIEKAGHLVNLERPFV----YNRQLKTILASLVH 294 (300)
Q Consensus 248 ~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~~ 294 (300)
+.++.+.+.++ +++++++++++||+++.++|++ +.+.|.+||+++..
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999884 3689999999999999999887 88889999998764
No 15
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.8e-35 Score=225.53 Aligned_cols=237 Identities=19% Similarity=0.131 Sum_probs=161.0
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCC-cceEEEEEehhH
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGV-EKCTLVGVSYGG 123 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~lvG~S~Gg 123 (300)
.|||+||++.+.. .|..+++.|.+. |+|+++|+||||.|+.+. ..++.+++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 5999999999999 999999999655 999999999999998654 357899999999999999987 499999999999
Q ss_pred HHHHHHHHhCcccccceEEEcccCCCCccc-hhhhhh-ccchhhhhhc----cCcccHH--HHH-HHHHHhhccCCCChH
Q 022253 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESV-SNAALE-RIGYESWVDF----LLPKTAD--ALK-VQFDIACYKLPTLPA 194 (300)
Q Consensus 124 ~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~-~~~~~~~~~~----~~~~~~~--~~~-~~~~~~~~~~~~~~~ 194 (300)
.+++.+|.++|++|+++|++++........ ...... .......... ....... ... .......+... +.
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 161 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQS--PL 161 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCC--CH
Confidence 999999999999999999999864321110 000000 0000000000 0000000 000 11111111111 10
Q ss_pred HHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCccc
Q 022253 195 FVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVN 274 (300)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 274 (300)
.... ............ ..... .+....+.++++|+++|+|++|..+|++..+.+.+.++ ++++++++++||+++
T Consensus 162 ~~~~-~~~~~~~~~~~~--~~~~~--~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-~a~~~~i~~~GH~~~ 235 (255)
T PLN02965 162 EDYT-LSSKLLRPAPVR--AFQDL--DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-PAQTYVLEDSDHSAF 235 (255)
T ss_pred HHHH-HHHHhcCCCCCc--chhhh--hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-cceEEEecCCCCchh
Confidence 0000 111111110000 00011 01122455789999999999999999999999999998 899999999999999
Q ss_pred ccChHHHHHHHHHHHhhc
Q 022253 275 LERPFVYNRQLKTILASL 292 (300)
Q Consensus 275 ~~~~~~~~~~i~~fl~~~ 292 (300)
+|+|+++++.|.+|+++.
T Consensus 236 ~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 236 FSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hcCHHHHHHHHHHHHHHh
Confidence 999999999999999875
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2.9e-35 Score=225.12 Aligned_cols=246 Identities=19% Similarity=0.147 Sum_probs=167.8
Q ss_pred EEEEc--cCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 022253 34 LNIWV--PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (300)
Q Consensus 34 l~~~~--~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~ 111 (300)
++|.. +.++.++|+|||+||++++.. .|..++..|+++|+|+++|+||||.|..+ ..++++++++|+.++++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~ 80 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQI 80 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCC
Confidence 34444 333457899999999999999 99999999998899999999999999864 457899999999999999999
Q ss_pred cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccc-hhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCC
Q 022253 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESV-SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLP 190 (300)
Q Consensus 112 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (300)
++++++||||||.+++.+|.++|++|+++|++++.+...... ........ ...... ...........+...
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~----- 152 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAI--NAVSEA-GATTRQQAAAIMRQH----- 152 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHH--HHhhhc-ccccHHHHHHHHHHh-----
Confidence 999999999999999999999999999999998654321110 00000000 000000 000000000111000
Q ss_pred CChHHHHHHHHHHHhcchh---hHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEc
Q 022253 191 TLPAFVYKHILEALSDHRK---ERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE 267 (300)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
........+......... .................+..+++|+|+|+|++|..++.+..+.+.+.++ ++++.+++
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 230 (255)
T PRK10673 153 -LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-QARAHVIA 230 (255)
T ss_pred -cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-CcEEEEeC
Confidence 000111111111110000 0000011111111123566789999999999999999999999999998 89999999
Q ss_pred CCCCcccccChHHHHHHHHHHHhh
Q 022253 268 KAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 268 ~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
++||++++++|+++++.|.+||++
T Consensus 231 ~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 231 GAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999975
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=5.3e-35 Score=235.14 Aligned_cols=269 Identities=16% Similarity=0.212 Sum_probs=171.9
Q ss_pred cccceeecCCCeEEEEEccCCC--CCCceEEEEcCCCCCchhhHHH-HHHhhh----cCceEEeecCCCCCCCCCCC-CC
Q 022253 21 MTQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQF-QVLALA----KTYEVYVPDFLFFGSSVTDR-PD 92 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~lhG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~G~G~s~~~~-~~ 92 (300)
....++.+ +|.+++|...++. +.+++|||+||++++.. .|.. +++.|. +.|+|+++|+||||.|+.+. ..
T Consensus 176 ~~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ 253 (481)
T PLN03087 176 FCTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSL 253 (481)
T ss_pred eeeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCc
Confidence 33455556 5789999887753 23589999999999998 9985 446665 35999999999999998764 44
Q ss_pred CChHHHHHHHH-HHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhh---hhhccchhhhhh
Q 022253 93 RTASFQAECMA-KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---ALERIGYESWVD 168 (300)
Q Consensus 93 ~~~~~~~~~~~-~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~ 168 (300)
++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.......... ............
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 88999999994 89999999999999999999999999999999999999999865432211100 000000000000
Q ss_pred cc-CcccHHHHHHHHHHhh----ccCCCC---------hHHHHHHHHHHHhcc-hhhHHHHHHHhhhc-------ccCCC
Q 022253 169 FL-LPKTADALKVQFDIAC----YKLPTL---------PAFVYKHILEALSDH-RKERIELLQALVIS-------DKEFS 226 (300)
Q Consensus 169 ~~-~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~ 226 (300)
.. .......+........ ...... ............... ..........+... .....
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 00 0000000000000000 000000 000000000000000 00000000000000 00112
Q ss_pred CCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc-cChHHHHHHHHHHHhhc
Q 022253 227 IPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-ERPFVYNRQLKTILASL 292 (300)
Q Consensus 227 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 292 (300)
..++++|+|+|+|++|.++|++..+.+++.++ ++++++++++||++++ ++|+++++.|.+|++..
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 23689999999999999999999999999998 9999999999999886 99999999999999653
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=9.2e-35 Score=221.97 Aligned_cols=246 Identities=19% Similarity=0.217 Sum_probs=171.6
Q ss_pred EEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcc
Q 022253 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK 113 (300)
Q Consensus 34 l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 113 (300)
++|...++.+++|+|||+||++.+.. .|..+++.|.+.|+|+++|+||||.|+.+...++.+++++++.++++.++.++
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIER 80 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 56666665446789999999999999 99999999987799999999999999877667899999999999999999899
Q ss_pred eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHH-HHHHHHhhccCCC-
Q 022253 114 CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL-KVQFDIACYKLPT- 191 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 191 (300)
++++|||+||.+++.+|.++|+++++++++++........... ... .. ......... ....... .....
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~--~~~--~~----~~~~~~~~~~~~~~~~~-~~~~~~ 151 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWN--ARI--AA----VRAEGLAALADAVLERW-FTPGFR 151 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHH--HHH--hh----hhhccHHHHHHHHHHHH-cccccc
Confidence 9999999999999999999999999999998765432211100 000 00 000000000 0001000 01100
Q ss_pred -ChHHHHHHHHHHHhc-chhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCC
Q 022253 192 -LPAFVYKHILEALSD-HRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 269 (300)
Q Consensus 192 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (300)
........+...... ...........+...+....+.++++|+++++|++|.++|.+..+.+.+.++ +.++++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (251)
T TIGR02427 152 EAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-GARFAEIRGA 230 (251)
T ss_pred cCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-CceEEEECCC
Confidence 011111111111111 1111111112222222234567789999999999999999999999999887 8999999999
Q ss_pred CCcccccChHHHHHHHHHHHh
Q 022253 270 GHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 270 gH~~~~~~~~~~~~~i~~fl~ 290 (300)
||++++++|+++++.|.+|++
T Consensus 231 gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 231 GHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCcccccChHHHHHHHHHHhC
Confidence 999999999999999999974
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=9.4e-35 Score=222.78 Aligned_cols=249 Identities=20% Similarity=0.250 Sum_probs=169.8
Q ss_pred EEEccCCC-CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCCc
Q 022253 35 NIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGVE 112 (300)
Q Consensus 35 ~~~~~~~~-~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~ 112 (300)
+|...+++ .++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|..+. ..++.+++++++.++++.++.+
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 45555532 35789999999999999 999999999888999999999999998654 4588999999999999999999
Q ss_pred ceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCC
Q 022253 113 KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL 192 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (300)
+++++|||+||.+++.++.++|++|+++|++++............... ..+...... ...............+.
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~ 154 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVR---IALLQHAGP---EAYVHAQALFLYPADWI 154 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHH---HHHHhccCc---chhhhhhhhhhccccHh
Confidence 999999999999999999999999999999997654322111000000 000000000 00000000000000000
Q ss_pred hH---HHHHHHHHHHh--cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEc
Q 022253 193 PA---FVYKHILEALS--DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE 267 (300)
Q Consensus 193 ~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
.. ........... ............+...+....+.++++|+++++|++|.++|++..+.+.+.++ +.+++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 233 (257)
T TIGR03611 155 SENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-NAQLKLLP 233 (257)
T ss_pred hccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-CceEEEEC
Confidence 00 00000000000 00111111112222233335677889999999999999999999999999988 89999999
Q ss_pred CCCCcccccChHHHHHHHHHHHhh
Q 022253 268 KAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 268 ~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
++||++++++|+++++.|.+||++
T Consensus 234 ~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 234 YGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999999963
No 20
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=2.6e-34 Score=213.38 Aligned_cols=269 Identities=17% Similarity=0.224 Sum_probs=177.2
Q ss_pred cccceeecCCCeEEEEEccCC-CCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCC----CCh
Q 022253 21 MTQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD----RTA 95 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~----~~~ 95 (300)
.+.+.+.++++..+....... +..++++|||||+|++.. .|..-.+.|++.++|+++|++|+|+|++|.-. ...
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e 143 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAE 143 (365)
T ss_pred cceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccch
Confidence 345566676666665544332 357899999999999999 99999999999999999999999999998732 345
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCcc-chhh-------hhhc-------
Q 022253 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTES-VSNA-------ALER------- 160 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~-~~~~-------~~~~------- 160 (300)
..+++-++++....++++.+|+|||+||++|..||.+||++|+.+||++|....... .... +...
T Consensus 144 ~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~ 223 (365)
T KOG4409|consen 144 KEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATN 223 (365)
T ss_pred HHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhc
Confidence 577899999999999999999999999999999999999999999999998765433 1110 0100
Q ss_pred cchhhhhhccCcccHHHHHHHHHHhhccC--CCChHHHHHHHHHHHhcchhhHHHHHHHhhhccc------CCCCCCC--
Q 022253 161 IGYESWVDFLLPKTADALKVQFDIACYKL--PTLPAFVYKHILEALSDHRKERIELLQALVISDK------EFSIPHF-- 230 (300)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i-- 230 (300)
.......+.+.+-... +...+....+.. ....++...+++-............+..+..... ...+..+
T Consensus 224 ~nPl~~LR~~Gp~Gp~-Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~ 302 (365)
T KOG4409|consen 224 FNPLALLRLMGPLGPK-LVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKK 302 (365)
T ss_pred CCHHHHHHhccccchH-HHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhcc
Confidence 0000001111111111 111111111111 1223333334443333333333333333322111 0222233
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.||+++|+|++|.+- ......+.+.+. ..++.++++++||.+++++|+.|++.|.++++..
T Consensus 303 ~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 303 DVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred CCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 499999999999874 444555555432 3689999999999999999999999999998753
No 21
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.6e-34 Score=227.50 Aligned_cols=267 Identities=12% Similarity=0.038 Sum_probs=171.4
Q ss_pred ceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCC------CCChH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP------DRTAS 96 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~------~~~~~ 96 (300)
..+...||.+++|...+++..+++||++||++++.. .|..++..|.+. |+|+++|+||||.|+.+.. ..+++
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 344445899999998775456789999999999988 899999888766 9999999999999976432 14789
Q ss_pred HHHHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhcc-chhhhhhccC
Q 022253 97 FQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI-GYESWVDFLL 171 (300)
Q Consensus 97 ~~~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 171 (300)
++++|+..+++.+ +..+++++||||||.+++.+|.++|++++++|+++|................ ..........
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIR 191 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCC
Confidence 9999999999887 5679999999999999999999999999999999987543211111000000 0000000000
Q ss_pred cccHHHHHHHHHHhhccCCC--ChHHHHHHHHHHHhcchh------hHHHHHHHhhh-cccCCCCCCCcceEEEEeeCCC
Q 022253 172 PKTADALKVQFDIACYKLPT--LPAFVYKHILEALSDHRK------ERIELLQALVI-SDKEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~g~~D 242 (300)
........... .......+ ..........+....... ........+.. ......+.++++|+|+|+|++|
T Consensus 192 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D 270 (330)
T PRK10749 192 DGYAIGTGRWR-PLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEE 270 (330)
T ss_pred CcCCCCCCCCC-CCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCC
Confidence 00000000000 00000000 001111111111111110 00001111100 0112356788999999999999
Q ss_pred cccCHHHHHHHHHHhC------CCceEEEEcCCCCcccccCh---HHHHHHHHHHHhhc
Q 022253 243 KIFDMQVARNLKEQVG------QNATMESIEKAGHLVNLERP---FVYNRQLKTILASL 292 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 292 (300)
.+++++.++.+.+.++ .++++++++|+||.++.|.+ +++.+.|.+|++++
T Consensus 271 ~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 271 RVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999998888763 25689999999999998875 67889999999865
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=4.2e-34 Score=216.93 Aligned_cols=234 Identities=20% Similarity=0.205 Sum_probs=152.7
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|+.+.. .+++.+++++.++++.++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 678999999999999 9999999984 59999999999999987653 58999999999999999999999999999999
Q ss_pred HHHHHHHhCcc-cccceEEEcccCCCCccchhhhhhccchhhhhhccCccc-HHHHHHHHHHhhccCCCChHHHHHHHHH
Q 022253 125 VGFKMAEMYPD-LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT-ADALKVQFDIACYKLPTLPAFVYKHILE 202 (300)
Q Consensus 125 ~a~~~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (300)
+|+.+|.++|+ +|++++++++.+......... ........+...+.... ...+...+....... ........+..
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 155 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQ-ARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS--LNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHH-HHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc--cCccHHHHHHH
Confidence 99999999966 499999998765432211100 00000000111111111 111111111000010 11111122211
Q ss_pred HHhc-chhhHHHHHHHhh---hcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccCh
Q 022253 203 ALSD-HRKERIELLQALV---ISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 278 (300)
Q Consensus 203 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 278 (300)
.... ............. ..+....+.++++|+++|+|++|..+. .+.+. . ++++++++++||+++.|+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~-~~~~~~i~~~gH~~~~e~p 228 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-L-ALPLHVIPNAGHNAHRENP 228 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-h-cCeEEEeCCCCCchhhhCh
Confidence 1111 1111111111110 111224567899999999999998642 23333 2 7899999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 022253 279 FVYNRQLKTILAS 291 (300)
Q Consensus 279 ~~~~~~i~~fl~~ 291 (300)
+++++.|.+|++.
T Consensus 229 ~~~~~~i~~fl~~ 241 (242)
T PRK11126 229 AAFAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999975
No 23
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=9.8e-35 Score=224.57 Aligned_cols=276 Identities=29% Similarity=0.399 Sum_probs=180.3
Q ss_pred ccccCcccceeecCCC--eEEEEEccCC-----C--CCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCC
Q 022253 16 LKLVGMTQRTIEIEPG--TILNIWVPKK-----T--TKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFG 84 (300)
Q Consensus 16 ~~~~~~~~~~i~~~~g--~~l~~~~~~~-----~--~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G 84 (300)
....+.+...++...| ....-|.+.. + ..+++||++|||+++.. .|+.++..|.+. +.|+++|++|+|
T Consensus 20 ~~~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g 98 (326)
T KOG1454|consen 20 FSFVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHG 98 (326)
T ss_pred eeeccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCC
Confidence 3345667777777767 3333333222 1 37899999999999999 999999999998 999999999999
Q ss_pred C-CCCCC-CCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceE---EEcccCCCCccchhhhhh
Q 022253 85 S-SVTDR-PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV---VTCSVMGLTESVSNAALE 159 (300)
Q Consensus 85 ~-s~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v---l~~~~~~~~~~~~~~~~~ 159 (300)
. |..+. ..++..++++.+..++.....++++++|||+||.+|+.+|+.+|+.|++++ ++++.....+........
T Consensus 99 ~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~ 178 (326)
T KOG1454|consen 99 YSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRR 178 (326)
T ss_pred cCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHH
Confidence 4 44444 338889999999999999998999999999999999999999999999999 555555433322221111
Q ss_pred ccc-hhhhhhccCcccHHHHHH----HHHHhhccCCCChHHHHHHHHHHHhcc------hhhHHHHHHHhhh--cccCCC
Q 022253 160 RIG-YESWVDFLLPKTADALKV----QFDIACYKLPTLPAFVYKHILEALSDH------RKERIELLQALVI--SDKEFS 226 (300)
Q Consensus 160 ~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~ 226 (300)
... +........+........ .+......................... ...+..+...... ......
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T KOG1454|consen 179 LLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSL 258 (326)
T ss_pred hhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHh
Confidence 111 111111111111111101 000000000001111111111111100 0111111111111 112234
Q ss_pred CCCCc-ceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhcc
Q 022253 227 IPHFS-QKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 293 (300)
Q Consensus 227 ~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 293 (300)
+.++. ||+++++|++|+++|.+.+..+.+.++ ++++++++++||.+++|.|+++++.|..|+.+..
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p-n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP-NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhCC-CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 56666 999999999999999999999999996 9999999999999999999999999999998753
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.4e-33 Score=217.95 Aligned_cols=254 Identities=15% Similarity=0.094 Sum_probs=163.9
Q ss_pred eecCCCeEEEEEccCC-CCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCC-CCChHHHHHHH
Q 022253 26 IEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQAECM 102 (300)
Q Consensus 26 i~~~~g~~l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~ 102 (300)
+..+||.+++|..+.+ ...++.|+++||+++++. .|..+++.|++. |+|+++|+||||.|+.... ..++..+++|+
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 3445899999865443 244567777799999999 999999999887 9999999999999976432 24556667777
Q ss_pred HHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhh-hhccCcc-cHH
Q 022253 103 AKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW-VDFLLPK-TAD 176 (300)
Q Consensus 103 ~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 176 (300)
.+.++.+ ...+++++|||+||.+|+.+|.++|++++++|+++|..................... ....... ...
T Consensus 84 ~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T PHA02857 84 VQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPE 163 (276)
T ss_pred HHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHh
Confidence 7777654 346899999999999999999999999999999998654211100000000000000 0000000 000
Q ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHHhc-chhhHHHHHHHhh--hcccCCCCCCCcceEEEEeeCCCcccCHHHHHHH
Q 022253 177 ALKVQFDIACYKLPTLPAFVYKHILEALSD-HRKERIELLQALV--ISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNL 253 (300)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 253 (300)
.. .. . ... ...+...... .......+...+. .......+.++++|+++++|++|.++|++.++.+
T Consensus 164 ~~---------~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 164 SV---------SR-D-MDE-VYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred hc---------cC-C-HHH-HHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHH
Confidence 00 00 0 000 0000000000 0000000000000 0112246778999999999999999999999999
Q ss_pred HHHhCCCceEEEEcCCCCcccccCh---HHHHHHHHHHHhhc
Q 022253 254 KEQVGQNATMESIEKAGHLVNLERP---FVYNRQLKTILASL 292 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 292 (300)
.+.+.+++++.+++++||.++.|++ +++.+.+.+||+++
T Consensus 232 ~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 232 MQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9988547899999999999998865 57999999999875
No 25
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=5.6e-34 Score=225.82 Aligned_cols=267 Identities=18% Similarity=0.163 Sum_probs=169.5
Q ss_pred CcccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchh-----------hHHHHHH---hhh-cCceEEeecCCCCC
Q 022253 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGIL-----------TWQFQVL---ALA-KTYEVYVPDFLFFG 84 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~-----------~~~~~~~---~l~-~~~~v~~~d~~G~G 84 (300)
.+......+ +|.+++|...|. .++++||+||+.++... .|..+++ .|. ++|+|+++|+||||
T Consensus 35 ~~~~~~~~~-~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g 111 (343)
T PRK08775 35 PLSMRHAGL-EDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGAD 111 (343)
T ss_pred ceeecCCCC-CCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCC
Confidence 344444455 789999998774 34457777776665541 4777875 574 56999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHhCCcce-EEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccch
Q 022253 85 SSVTDRPDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGY 163 (300)
Q Consensus 85 ~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 163 (300)
.|.. ..++.+++++|+.++++.++.+++ +++||||||++|+.+|.++|++|+++|++++......... ........
T Consensus 112 ~s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~-~~~~~~~~ 188 (343)
T PRK08775 112 GSLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAA-AWRALQRR 188 (343)
T ss_pred CCCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHH-HHHHHHHH
Confidence 8843 356788999999999999999775 7999999999999999999999999999998754321110 00000000
Q ss_pred h-hhhhccC-cccH-HHHHH----------HHHHhhccCCC-Ch---HHHHHHHHHH----Hh--cchhhHHHHHHHhhh
Q 022253 164 E-SWVDFLL-PKTA-DALKV----------QFDIACYKLPT-LP---AFVYKHILEA----LS--DHRKERIELLQALVI 220 (300)
Q Consensus 164 ~-~~~~~~~-~~~~-~~~~~----------~~~~~~~~~~~-~~---~~~~~~~~~~----~~--~~~~~~~~~~~~~~~ 220 (300)
. ....... .... ..... .+......... .. ......++.. .. ..............
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~- 267 (343)
T PRK08775 189 AVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID- 267 (343)
T ss_pred HHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh-
Confidence 0 0000000 0000 00000 00000000000 00 0011111111 11 01111111111111
Q ss_pred cccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcC-CCCcccccChHHHHHHHHHHHhhccc
Q 022253 221 SDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 221 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
.....+.++++|+|+|+|++|.++|.+..+.+.+.++++++++++++ +||++++|+|++|++.|.+||++...
T Consensus 268 -~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 268 -LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTGE 341 (343)
T ss_pred -hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhccc
Confidence 11234678999999999999999999999999998844899999985 99999999999999999999987654
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=4.6e-34 Score=217.35 Aligned_cols=237 Identities=17% Similarity=0.170 Sum_probs=155.7
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
.|+|||+||++++.. .|..+++.|.+.|+|+++|+||+|.|+.. ...+.+++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 489999999999999 99999999988899999999999998754 3456777777765543 36999999999999
Q ss_pred HHHHHHHhCcccccceEEEcccCCCCccchhh-hhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHH
Q 022253 125 VGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-ALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEA 203 (300)
Q Consensus 125 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
+++.+|.++|++++++|++++.+......... .........+...+..........+.......... ...........
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 156 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT-ARQDARALKQT 156 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc-cchHHHHHHHH
Confidence 99999999999999999998875432111000 00000000000001000011111111111111111 11111111111
Q ss_pred Hhcc----hhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChH
Q 022253 204 LSDH----RKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 279 (300)
Q Consensus 204 ~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 279 (300)
.... .......+..+...+....+.++++|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~ 235 (245)
T TIGR01738 157 LLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSHAE 235 (245)
T ss_pred hhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccCHH
Confidence 1100 111112222222222334567899999999999999999999999999988 99999999999999999999
Q ss_pred HHHHHHHHHH
Q 022253 280 VYNRQLKTIL 289 (300)
Q Consensus 280 ~~~~~i~~fl 289 (300)
++++.|.+|+
T Consensus 236 ~~~~~i~~fi 245 (245)
T TIGR01738 236 AFCALLVAFK 245 (245)
T ss_pred HHHHHHHhhC
Confidence 9999999985
No 27
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=5.6e-34 Score=226.02 Aligned_cols=272 Identities=17% Similarity=0.127 Sum_probs=168.5
Q ss_pred cCcccceeecCCCeEEEEEccCCC--CCCceEEEEcCCCCCchhhHHHHH---Hhhhc-CceEEeecCCCCCCCCCCCC-
Q 022253 19 VGMTQRTIEIEPGTILNIWVPKKT--TKKHAVVLLHPFGFDGILTWQFQV---LALAK-TYEVYVPDFLFFGSSVTDRP- 91 (300)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~--~~~~~vv~lhG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~G~G~s~~~~~- 91 (300)
..++.+.=.+.+|.+++|...|.. ++.|+||++||++++.. .|..++ +.|.. +|+|+++|+||||.|+.+..
T Consensus 13 ~~~~~~~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~ 91 (339)
T PRK07581 13 GDVELQSGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT 91 (339)
T ss_pred CCeEecCCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCC
Confidence 334433333447899999988752 23466777777777766 666544 46764 49999999999999986542
Q ss_pred --CCChHH-----HHHHHHH----HHHHhCCcc-eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhh
Q 022253 92 --DRTASF-----QAECMAK----GLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (300)
Q Consensus 92 --~~~~~~-----~~~~~~~----~i~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 159 (300)
.++.+. +++|+.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++......... ....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~-~~~~ 170 (339)
T PRK07581 92 PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNF-VFLE 170 (339)
T ss_pred CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHH-HHHH
Confidence 234332 4566654 778899999 47999999999999999999999999999987654322110 0000
Q ss_pred ccc----h-hhhhhccCc----ccHHHHHHHHH-----Hhhcc-----CCCC--hHHHHHHHHHHHhc--chhhHHHHHH
Q 022253 160 RIG----Y-ESWVDFLLP----KTADALKVQFD-----IACYK-----LPTL--PAFVYKHILEALSD--HRKERIELLQ 216 (300)
Q Consensus 160 ~~~----~-~~~~~~~~~----~~~~~~~~~~~-----~~~~~-----~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~ 216 (300)
... . ..+...... ........... ..... .... .+............ ........+.
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 250 (339)
T PRK07581 171 GLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLW 250 (339)
T ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHH
Confidence 000 0 000000000 00000000000 00000 0000 01112222222211 1111222211
Q ss_pred Hhhh----------cccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcC-CCCcccccChHHHHHHH
Q 022253 217 ALVI----------SDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLVNLERPFVYNRQL 285 (300)
Q Consensus 217 ~~~~----------~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i 285 (300)
.+.. .+....+.++++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||++++++|++++..|
T Consensus 251 ~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 251 TWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-NAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred HhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEeCCCCCccccccCcHHHHHHH
Confidence 1110 12224567899999999999999999999999999998 899999998 89999999999999999
Q ss_pred HHHHhhcc
Q 022253 286 KTILASLV 293 (300)
Q Consensus 286 ~~fl~~~~ 293 (300)
.+||++..
T Consensus 330 ~~~~~~~~ 337 (339)
T PRK07581 330 DAALKELL 337 (339)
T ss_pred HHHHHHHH
Confidence 99999864
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.4e-34 Score=224.99 Aligned_cols=266 Identities=17% Similarity=0.182 Sum_probs=170.0
Q ss_pred ccceeecCCCeEEEEEccCCC---CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCC-CCChH
Q 022253 22 TQRTIEIEPGTILNIWVPKKT---TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTAS 96 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~---~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~ 96 (300)
+..++...||.+++|+.+.+. +.+++|||+||++.+....|..++..|++. |+|+++|+||||.|+.... ..+.+
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 112 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVD 112 (330)
T ss_pred ccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHH
Confidence 355677779999998765432 346679999999865431567778888876 9999999999999975443 35788
Q ss_pred HHHHHHHHHHHHhCC------cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhh-hhhccchhhhhhc
Q 022253 97 FQAECMAKGLRKLGV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-ALERIGYESWVDF 169 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 169 (300)
.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|........... .... .......
T Consensus 113 ~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~--~~~~~~~ 190 (330)
T PLN02298 113 LVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQ--ILTFVAR 190 (330)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHH--HHHHHHH
Confidence 899999999998743 379999999999999999999999999999999875432211000 0000 0000000
Q ss_pred cCcccHHHHHHHHHHhhccCCCChHHHHHHHHHH---Hhcchhh---HHHHHHHhhhcccCCCCCCCcceEEEEeeCCCc
Q 022253 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEA---LSDHRKE---RIELLQALVISDKEFSIPHFSQKIHLLWGENDK 243 (300)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 243 (300)
..+..... . ...... .............. ....... ........ ......+.++++|+|+++|++|.
T Consensus 191 ~~~~~~~~--~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~ 263 (330)
T PLN02298 191 FLPTLAIV--P--TADLLE-KSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT--DYLGKKLKDVSIPFIVLHGSADV 263 (330)
T ss_pred HCCCCccc--c--CCCccc-ccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH--HHHHHhhhhcCCCEEEEecCCCC
Confidence 00000000 0 000000 00000000000000 0000000 00111110 01124567889999999999999
Q ss_pred ccCHHHHHHHHHHhC-CCceEEEEcCCCCcccccChH----HHHHHHHHHHhhccccc
Q 022253 244 IFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPF----VYNRQLKTILASLVHAN 296 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~~~ 296 (300)
++|++.++.+++.++ +++++++++++||.++.++|+ ++.+.|.+||.+....+
T Consensus 264 ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 264 VTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred CCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999988875 368999999999999998875 47778899998876544
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.6e-32 Score=218.21 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=164.8
Q ss_pred EEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCC-C----hHHHHHHHHHHHH
Q 022253 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDR-T----ASFQAECMAKGLR 107 (300)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~-~----~~~~~~~~~~~i~ 107 (300)
.+++....+++++|+|||+||++++.. .|...+..|.++|+|+++|+||||.|+.+.... + .+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 555444433357799999999999888 898888999888999999999999998754321 1 1235677888888
Q ss_pred HhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchh-hhhhcc-c-hh-h--------------hhhc
Q 022253 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERI-G-YE-S--------------WVDF 169 (300)
Q Consensus 108 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-~~~~~~-~-~~-~--------------~~~~ 169 (300)
.++.++++++||||||.+++.+|.++|++|+++|+++|.......... ...... . +. . ....
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 251 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRG 251 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHh
Confidence 889899999999999999999999999999999999987543221110 000000 0 00 0 0000
Q ss_pred cCcccHHHHHHHHHHhhcc---CCCChH---HHHHHHHHHHhcchhhHHHHHHH------hhhcccCCCCCCCcceEEEE
Q 022253 170 LLPKTADALKVQFDIACYK---LPTLPA---FVYKHILEALSDHRKERIELLQA------LVISDKEFSIPHFSQKIHLL 237 (300)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~P~l~i 237 (300)
..+.............+.. ...... ....+++................ +...+....+.++++|+++|
T Consensus 252 ~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI 331 (402)
T PLN02894 252 LGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFI 331 (402)
T ss_pred ccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEE
Confidence 0000000011111110000 000111 11112222211111111111111 11122234577899999999
Q ss_pred eeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhcccccC
Q 022253 238 WGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 297 (300)
Q Consensus 238 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 297 (300)
+|++|.+.+ .....+.+..+..+++++++++||+++.|+|++|++.|.+|++.......
T Consensus 332 ~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 332 YGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred EeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 999998765 55555555554368999999999999999999999999999988765543
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=4.9e-33 Score=222.54 Aligned_cols=264 Identities=22% Similarity=0.233 Sum_probs=168.6
Q ss_pred CCeEEEEEccCCC--CCCceEEEEcCCCCCchhh-------------HHHHH----HhhhcCceEEeecCCCC-CCCCCC
Q 022253 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGILT-------------WQFQV----LALAKTYEVYVPDFLFF-GSSVTD 89 (300)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~lhG~~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~G~-G~s~~~ 89 (300)
+|.+++|...|.. .++|+|||+||++++.. . |..++ ..+.++|+|+++|++|+ |.|+.+
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 6778899988752 24789999999999987 5 56665 23355699999999983 444322
Q ss_pred C--------------CCCChHHHHHHHHHHHHHhCCcc-eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccch
Q 022253 90 R--------------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVS 154 (300)
Q Consensus 90 ~--------------~~~~~~~~~~~~~~~i~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~ 154 (300)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 189 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNI 189 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHH
Confidence 1 15789999999999999999999 48999999999999999999999999999998765432111
Q ss_pred hh---hhhccch-hhhh--hc----cCc---------------ccHHHHHHHHHHhhccCC---CC-hHHHHHHHHH---
Q 022253 155 NA---ALERIGY-ESWV--DF----LLP---------------KTADALKVQFDIACYKLP---TL-PAFVYKHILE--- 202 (300)
Q Consensus 155 ~~---~~~~~~~-~~~~--~~----~~~---------------~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~--- 202 (300)
.. ....... ..+. .. ..+ .....+...+........ +. .......++.
T Consensus 190 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~ 269 (379)
T PRK00175 190 AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQG 269 (379)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHH
Confidence 00 0000000 0000 00 000 000000000000000000 00 0001111111
Q ss_pred -HHh--cchhhHHHHHHHhhhcc--------cCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCc----eEEEEc
Q 022253 203 -ALS--DHRKERIELLQALVISD--------KEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNA----TMESIE 267 (300)
Q Consensus 203 -~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~ 267 (300)
... ............+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+.++ ++ ++++++
T Consensus 270 ~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~-~a~~~~~l~~i~ 348 (379)
T PRK00175 270 DKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALL-AAGADVSYAEID 348 (379)
T ss_pred HHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHH-hcCCCeEEEEeC
Confidence 011 11111111112221111 224567899999999999999999999999999998 55 777775
Q ss_pred -CCCCcccccChHHHHHHHHHHHhhcccc
Q 022253 268 -KAGHLVNLERPFVYNRQLKTILASLVHA 295 (300)
Q Consensus 268 -~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 295 (300)
++||++++++|+++++.|.+||++...+
T Consensus 349 ~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred CCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 8999999999999999999999987654
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=6.6e-33 Score=220.38 Aligned_cols=260 Identities=20% Similarity=0.234 Sum_probs=165.6
Q ss_pred CCeEEEEEccCC--CCCCceEEEEcCCCCCchh----------hHHHHH---Hhh-hcCceEEeecCCC--CCCCCCC--
Q 022253 30 PGTILNIWVPKK--TTKKHAVVLLHPFGFDGIL----------TWQFQV---LAL-AKTYEVYVPDFLF--FGSSVTD-- 89 (300)
Q Consensus 30 ~g~~l~~~~~~~--~~~~~~vv~lhG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~G--~G~s~~~-- 89 (300)
+|.+++|...|. ..++++|||+||++++... .|..++ ..| .++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 788999998875 2346899999999997741 267775 244 4559999999999 5655431
Q ss_pred --C--------CCCChHHHHHHHHHHHHHhCCcc-eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhh-
Q 022253 90 --R--------PDRTASFQAECMAKGLRKLGVEK-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA- 157 (300)
Q Consensus 90 --~--------~~~~~~~~~~~~~~~i~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~- 157 (300)
. ..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++............
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 1 14788999999999999999998 99999999999999999999999999999998765432211100
Q ss_pred --hhccch-hhhh--hccC---cccHHHHHHH-----------HHHhhccCCC---Ch------HHHHHHHH----HHHh
Q 022253 158 --LERIGY-ESWV--DFLL---PKTADALKVQ-----------FDIACYKLPT---LP------AFVYKHIL----EALS 205 (300)
Q Consensus 158 --~~~~~~-~~~~--~~~~---~~~~~~~~~~-----------~~~~~~~~~~---~~------~~~~~~~~----~~~~ 205 (300)
...... ..+. .... +......... +...+..... .+ ......+. ....
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 000000 0000 0000 0000000000 0000100000 00 00011111 0111
Q ss_pred c--chhhHHHHHHHhhhcc-------cCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEE-----EEcCCCC
Q 022253 206 D--HRKERIELLQALVISD-------KEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATME-----SIEKAGH 271 (300)
Q Consensus 206 ~--~~~~~~~~~~~~~~~~-------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH 271 (300)
. ...........+...+ ....+.+|++|+|+|+|++|.++|++..+.+.+.++ +.+++ +++++||
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-~~~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALP-AAGLRVTYVEIESPYGH 332 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHh-hcCCceEEEEeCCCCCc
Confidence 1 1111112222222221 124677899999999999999999999999999998 66654 5578999
Q ss_pred cccccChHHHHHHHHHHHh
Q 022253 272 LVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 272 ~~~~~~~~~~~~~i~~fl~ 290 (300)
++++++|+++++.|.+||+
T Consensus 333 ~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 333 DAFLVETDQVEELIRGFLR 351 (351)
T ss_pred chhhcCHHHHHHHHHHHhC
Confidence 9999999999999999984
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=4.9e-32 Score=211.16 Aligned_cols=259 Identities=18% Similarity=0.166 Sum_probs=165.1
Q ss_pred eeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCC---CCChHHHHH
Q 022253 25 TIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASFQAE 100 (300)
Q Consensus 25 ~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~---~~~~~~~~~ 100 (300)
.+.+ +|.++.|...+....+++|||+||++++....|..+...|.+. |+|+++|+||||.|..+.. .++.+.+++
T Consensus 6 ~~~~-~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~ 84 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVD 84 (288)
T ss_pred eecC-CCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHH
Confidence 4455 5777888777654457899999998766652556666667763 9999999999999986542 278999999
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchh--hhhhccch---hhhhhcc--Ccc
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIGY---ESWVDFL--LPK 173 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~--~~~ 173 (300)
++.++++.++.++++++|||+||.+++.+|..+|+++++++++++.......... ........ ....... ...
T Consensus 85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (288)
T TIGR01250 85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDY 164 (288)
T ss_pred HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999999999876532211110 00000000 0000000 000
Q ss_pred cHHHHHHHHHHhh----ccCCCChHHHHHHHHHHHhcchhhHHHH---------HHHhhhcccCCCCCCCcceEEEEeeC
Q 022253 174 TADALKVQFDIAC----YKLPTLPAFVYKHILEALSDHRKERIEL---------LQALVISDKEFSIPHFSQKIHLLWGE 240 (300)
Q Consensus 174 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~P~l~i~g~ 240 (300)
............. ......+. ....... ......... ...+...+....+.++++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 240 (288)
T TIGR01250 165 DNPEYQEAVEVFYHHLLCRTRKWPE-ALKHLKS---GMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGE 240 (288)
T ss_pred chHHHHHHHHHHHHHhhcccccchH-HHHHHhh---ccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecC
Confidence 0000000000000 00000000 0000000 000000000 00000111223556789999999999
Q ss_pred CCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHh
Q 022253 241 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 290 (300)
+|.+ +++..+.+.+.++ +.++++++++||+++.++|+++++.|.+|++
T Consensus 241 ~D~~-~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 241 FDTM-TPEAAREMQELIA-GSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCcc-CHHHHHHHHHhcc-CCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 9985 6678888888887 8899999999999999999999999999984
No 33
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=3.6e-32 Score=208.07 Aligned_cols=250 Identities=17% Similarity=0.122 Sum_probs=165.3
Q ss_pred CCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHH
Q 022253 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLR 107 (300)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~ 107 (300)
+|.+++|..+. +++|+|||+||++.+.. .|..++..|.+. |+|+++|+||||.|.... ...+++++++++.++++
T Consensus 5 ~~~~~~~~~~~--~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVTDMKPN--RQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred ccccccccccc--CCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 68888888754 36889999999999999 999999999875 999999999999886443 34799999999999999
Q ss_pred HhC-CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchh-hhhhccc-hhhhhhc----cC--c----cc
Q 022253 108 KLG-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN-AALERIG-YESWVDF----LL--P----KT 174 (300)
Q Consensus 108 ~~~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~-~~~~~~~-~~~~~~~----~~--~----~~ 174 (300)
.++ .++++++||||||.+++.++.++|++|+++|++++.......... ....... ....... .. . ..
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTS 161 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCce
Confidence 985 579999999999999999999999999999999875432111000 0000000 0000000 00 0 00
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCC-cceEEEEeeCCCcccCHHHHHHH
Q 022253 175 ADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHF-SQKIHLLWGENDKIFDMQVARNL 253 (300)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~ 253 (300)
......+.....+.. .+....... ........ ...+..........++ ++|+++|.|++|..+|++..+.+
T Consensus 162 ~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m 233 (273)
T PLN02211 162 AIIKKEFRRKILYQM--SPQEDSTLA-AMLLRPGP-----ILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAM 233 (273)
T ss_pred eeeCHHHHHHHHhcC--CCHHHHHHH-HHhcCCcC-----ccccccccccccccccCccceEEEEeCCCCCCCHHHHHHH
Confidence 000000000000110 011110000 00000000 0000011111123345 78999999999999999999999
Q ss_pred HHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 254 KEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.+.++ ..+++.++ +||.+++++|+++++.|.++....
T Consensus 234 ~~~~~-~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 234 IKRWP-PSQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred HHhCC-ccEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 99998 77999997 899999999999999999887653
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1.6e-33 Score=211.90 Aligned_cols=221 Identities=28% Similarity=0.373 Sum_probs=154.2
Q ss_pred EEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHH
Q 022253 48 VVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~ 125 (300)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|+.+. ...+++++++|+.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999999 999999999766999999999999999766 35789999999999999999999999999999999
Q ss_pred HHHHHHhCcccccceEEEcccCCCCccc----hhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHH
Q 022253 126 GFKMAEMYPDLVESMVVTCSVMGLTESV----SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHIL 201 (300)
Q Consensus 126 a~~~a~~~p~~v~~~vl~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (300)
++.++.++|++|+++|++++........ ......... ................. ...........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 148 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLL---------AWRSRSLRRLASRFFYR--WFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH--HHTHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhh---------hcccccccccccccccc--ccccccccccc
Confidence 9999999999999999999987543211 001110000 00000000000000000 00111111111
Q ss_pred HHHhcchhhHHHHHHH-hhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHH
Q 022253 202 EALSDHRKERIELLQA-LVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 280 (300)
Q Consensus 202 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 280 (300)
.. ........... ....+....+.++++|+++++|++|.+++.+..+.+.+.++ ++++++++++||++++++|++
T Consensus 149 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~ 224 (228)
T PF12697_consen 149 RS---SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDE 224 (228)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHH
T ss_pred cc---cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHH
Confidence 11 00111111111 11112223456679999999999999999999999999998 999999999999999999999
Q ss_pred HHHH
Q 022253 281 YNRQ 284 (300)
Q Consensus 281 ~~~~ 284 (300)
+++.
T Consensus 225 ~~~a 228 (228)
T PF12697_consen 225 VAEA 228 (228)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9863
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=100.00 E-value=2.5e-32 Score=220.01 Aligned_cols=252 Identities=24% Similarity=0.300 Sum_probs=171.2
Q ss_pred ceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMA 103 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 103 (300)
..+.. ++.+++|...+. +++++|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|.......+++++++++.
T Consensus 112 ~~~~~-~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARI-GGRTVRYLRLGE-GDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVL 188 (371)
T ss_pred CcceE-cCcEEEEecccC-CCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 34455 577888887764 45789999999999999 9999999998889999999999999976666788999999999
Q ss_pred HHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHH
Q 022253 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFD 183 (300)
Q Consensus 104 ~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (300)
++++.++.++++++|||+||.+++.+|..+|++++++|++++......... .....+ . .......+...+.
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~~~~~-----~---~~~~~~~~~~~~~ 259 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING-DYIDGF-----V---AAESRRELKPVLE 259 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch-hHHHHh-----h---cccchhHHHHHHH
Confidence 999999989999999999999999999999999999999987643221110 000000 0 0001111111111
Q ss_pred HhhccCCCChHHHHHHHHHHHh-cchhhH-HHHHHHhhh-----cccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHH
Q 022253 184 IACYKLPTLPAFVYKHILEALS-DHRKER-IELLQALVI-----SDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQ 256 (300)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~-----~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 256 (300)
...................... ...... ......... .+....+.++++|+++++|++|.++|.+..+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l--- 336 (371)
T PRK14875 260 LLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL--- 336 (371)
T ss_pred HHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---
Confidence 1111111111111111111100 000000 000000000 111124567899999999999999998766543
Q ss_pred hCCCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 257 VGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 257 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
..+.++.+++++||++++++|+++++.|.+|+++
T Consensus 337 -~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 337 -PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred -cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 3378999999999999999999999999999975
No 36
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=100.00 E-value=1e-31 Score=245.82 Aligned_cols=275 Identities=20% Similarity=0.270 Sum_probs=178.6
Q ss_pred cccCcccceeecC-CCeE--EEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC---
Q 022253 17 KLVGMTQRTIEIE-PGTI--LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--- 90 (300)
Q Consensus 17 ~~~~~~~~~i~~~-~g~~--l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--- 90 (300)
...+.+...+.+. +|.. ++|...|..+.+++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|....
T Consensus 1340 ~~~~l~~~~~~v~~~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~ 1418 (1655)
T PLN02980 1340 KEEQVRTYELRVDVDGFSCLIKVHEVGQNAEGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSKIQNHAK 1418 (1655)
T ss_pred ccCCCceEEEEEccCceEEEEEEEecCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCccccc
Confidence 3445666666654 3322 33444554345789999999999999 999999999888999999999999997543
Q ss_pred -----CCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhh
Q 022253 91 -----PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES 165 (300)
Q Consensus 91 -----~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (300)
..++++.+++++..++++++.++++++||||||.+++.++.++|++|+++|++++.+............ .....
T Consensus 1419 ~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~-~~~~~ 1497 (1655)
T PLN02980 1419 ETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRS-AKDDS 1497 (1655)
T ss_pred cccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHh-hhhhH
Confidence 246789999999999999999999999999999999999999999999999998765432211111000 00000
Q ss_pred hhhccCcccHHHHHHHHHHhhccC---CCChHHHHHHHHHHHh--cchhhHHHHHHHhh---hcccCCCCCCCcceEEEE
Q 022253 166 WVDFLLPKTADALKVQFDIACYKL---PTLPAFVYKHILEALS--DHRKERIELLQALV---ISDKEFSIPHFSQKIHLL 237 (300)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~i~~P~l~i 237 (300)
....+... ....+........ ................ ............+. ..+....+.++++|+|+|
T Consensus 1498 ~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI 1574 (1655)
T PLN02980 1498 RARMLIDH---GLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLV 1574 (1655)
T ss_pred HHHHHHhh---hHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEE
Confidence 00000000 0011111100000 0000011111111111 11111122222221 111224578899999999
Q ss_pred eeCCCcccCHHHHHHHHHHhCC-----------CceEEEEcCCCCcccccChHHHHHHHHHHHhhcccccC
Q 022253 238 WGENDKIFDMQVARNLKEQVGQ-----------NATMESIEKAGHLVNLERPFVYNRQLKTILASLVHANG 297 (300)
Q Consensus 238 ~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~~ 297 (300)
+|++|..++ +..+.+.+.++. .+++++++++||++++|+|+++++.|.+||++...++.
T Consensus 1575 ~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1575 VGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSST 1644 (1655)
T ss_pred EECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCC
Confidence 999999875 666777777762 15899999999999999999999999999998776554
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=7e-32 Score=205.95 Aligned_cols=242 Identities=24% Similarity=0.307 Sum_probs=157.9
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC--CCCChHHHHHH-HHHHHHHhCCcceEEEEEeh
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQAEC-MAKGLRKLGVEKCTLVGVSY 121 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~-~~~~i~~~~~~~~~lvG~S~ 121 (300)
+|+|||+||++++.. .|..+++.|++.|+|+++|+||+|.|+.+. ...++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999999 999999999966999999999999998654 34678888888 78888888889999999999
Q ss_pred hHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHH-HHHHHHhhccC-CCChHHHHHH
Q 022253 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL-KVQFDIACYKL-PTLPAFVYKH 199 (300)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 199 (300)
||.+++.+|.++|++|++++++++.............. .........+.......+ ........+.. ...+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARR-QNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhh-hcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 99999999999999999999999865433211110000 000000000000000000 00000000000 0111221111
Q ss_pred HHHHHhc-chhhHHHHHHHhhh---cccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc
Q 022253 200 ILEALSD-HRKERIELLQALVI---SDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 275 (300)
Q Consensus 200 ~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 275 (300)
....... .............. .+....+.++++|+++++|++|..++ +..+.+.+..+ +++++.++++||++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHL 236 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCc
Confidence 2111111 11111111111110 11123456789999999999998764 56677777776 8999999999999999
Q ss_pred cChHHHHHHHHHHHh
Q 022253 276 ERPFVYNRQLKTILA 290 (300)
Q Consensus 276 ~~~~~~~~~i~~fl~ 290 (300)
++|+++++.|.+|++
T Consensus 237 e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 237 ENPEAFAKILLAFLE 251 (251)
T ss_pred cChHHHHHHHHHHhC
Confidence 999999999999984
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=100.00 E-value=1e-30 Score=204.17 Aligned_cols=263 Identities=16% Similarity=0.086 Sum_probs=160.4
Q ss_pred ccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhc-CceEEeecCCCCCCCCCCCC--CCChHHH
Q 022253 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAK-TYEVYVPDFLFFGSSVTDRP--DRTASFQ 98 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~--~~~~~~~ 98 (300)
...++...||.+++|...+. +++++|||+||++++.. .+ .....+.. .|+|+++|+||||.|+.+.. ..+.+++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~-~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGT-DP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred cCCeEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCC-CH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 45678888899999988764 34678999999887765 43 34444544 49999999999999986542 3577889
Q ss_pred HHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhh---hhccc---hhhhhhccCc
Q 022253 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA---LERIG---YESWVDFLLP 172 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~ 172 (300)
++|+..++++++.++++++||||||.+++.++.++|++|+++|++++............ ..... +..+......
T Consensus 82 ~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T TIGR01249 82 VADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPE 161 (306)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCCh
Confidence 99999999999999999999999999999999999999999999988654321110000 00000 0001100000
Q ss_pred ccH-HHHHHHHHHhhccCCCChHHHHH----HHHH-HHhcch---------hhHHHHHHHh----------hhcc--cCC
Q 022253 173 KTA-DALKVQFDIACYKLPTLPAFVYK----HILE-ALSDHR---------KERIELLQAL----------VISD--KEF 225 (300)
Q Consensus 173 ~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~---------~~~~~~~~~~----------~~~~--~~~ 225 (300)
... ..+...+................ .+.. ...... ......+..+ .... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T TIGR01249 162 NERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILD 241 (306)
T ss_pred hhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHH
Confidence 000 01111111111111000000000 0000 000000 0000000000 0000 112
Q ss_pred CCCCC-cceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 226 SIPHF-SQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 226 ~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
.+.++ ++|+++|+|++|.++|.+.++.+++.++ ++++++++++||.++. + +..+.|.+|+.+
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH~~~~--~-~~~~~i~~~~~~ 304 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-EAELKVTNNAGHSAFD--P-NNLAALVHALET 304 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-CCEEEEECCCCCCCCC--h-HHHHHHHHHHHH
Confidence 44566 5899999999999999999999999998 8999999999999863 2 244555555543
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=1.5e-30 Score=199.48 Aligned_cols=267 Identities=18% Similarity=0.151 Sum_probs=177.4
Q ss_pred CcccceeecCCCeEEEEEccCCCCC-CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCC-CCC-CCCCh
Q 022253 20 GMTQRTIEIEPGTILNIWVPKKTTK-KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV-TDR-PDRTA 95 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~-~~~-~~~~~ 95 (300)
...+..+...||..++|..+....+ ..+||++||++.+.. -|..++..|... |.|+++|+||||.|. ... ...++
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f 86 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSF 86 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhH
Confidence 3445566666999999988766433 379999999999999 999999999998 999999999999997 333 33558
Q ss_pred HHHHHHHHHHHHHhC----CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhcc---chhhhhh
Q 022253 96 SFQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERI---GYESWVD 168 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~---~~~~~~~ 168 (300)
.++.+|+..+++... ..+++++||||||.+++.++.+++.+|+++|+.+|................ ....+..
T Consensus 87 ~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p 166 (298)
T COG2267 87 ADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRP 166 (298)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccccccc
Confidence 999999999999885 358999999999999999999999999999999998776530000000000 0000000
Q ss_pred ccCcccHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHh-c-chhhHHHHHHHhhhcc--cCCCCCCCcceEEEEeeCCC
Q 022253 169 FLLPKTADALKVQFDIACYKLPTL--PAFVYKHILEALS-D-HRKERIELLQALVISD--KEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~--~~~~~~~i~~P~l~i~g~~D 242 (300)
.+.... . . .......+. ..+..+.+...-. . .......+...+.... .......+++|+|+++|++|
T Consensus 167 ~~~~~~-~--~----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D 239 (298)
T COG2267 167 KLPVDS-N--L----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDD 239 (298)
T ss_pred ccccCc-c--c----ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCC
Confidence 000000 0 0 000000000 1111111111111 0 0011111111111111 22346678999999999999
Q ss_pred cccC-HHHHHHHHHHhC-CCceEEEEcCCCCccccc-Ch--HHHHHHHHHHHhhccc
Q 022253 243 KIFD-MQVARNLKEQVG-QNATMESIEKAGHLVNLE-RP--FVYNRQLKTILASLVH 294 (300)
Q Consensus 243 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~--~~~~~~i~~fl~~~~~ 294 (300)
.+++ .+....+.+... +++++++++|+.|.++.| +. +++.+.+.+|+.+...
T Consensus 240 ~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 240 RVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999 677777777765 457899999999999886 44 7899999999987654
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=3.4e-30 Score=205.06 Aligned_cols=260 Identities=16% Similarity=0.169 Sum_probs=166.1
Q ss_pred ceeecCCCeEEEEEccCC--CCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCC-CCChHHHH
Q 022253 24 RTIEIEPGTILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRP-DRTASFQA 99 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~--~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~~~ 99 (300)
..+..++|..+++..+.+ .+.+++|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.... ..+.+.++
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~ 191 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVV 191 (395)
T ss_pred EEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHH
Confidence 334455677777665543 245679999999999988 899999999876 9999999999999987543 35778889
Q ss_pred HHHHHHHHHhCC----cceEEEEEehhHHHHHHHHHhCcc---cccceEEEcccCCCCccchhhhhhccchhhhhhccCc
Q 022253 100 ECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (300)
Q Consensus 100 ~~~~~~i~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (300)
+|+.++++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|......... .... .........+
T Consensus 192 ~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~--~~~~--~~~l~~~~~p 266 (395)
T PLN02652 192 EDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP--IVGA--VAPIFSLVAP 266 (395)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH--HHHH--HHHHHHHhCC
Confidence 999999988743 37999999999999998764 553 7999999998754322110 0000 0000000000
Q ss_pred ccHHHHHHHHHHhhccCCCChHHHHHHHHHHHh-c-ch--hhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHH
Q 022253 173 KTADALKVQFDIACYKLPTLPAFVYKHILEALS-D-HR--KERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQ 248 (300)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 248 (300)
... +..... ........+......+..... . .. .......... ......+.++++|+|+++|++|.++|.+
T Consensus 267 ~~~--~~~~~~-~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~~D~vvp~~ 341 (395)
T PLN02652 267 RFQ--FKGANK-RGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGTADRVTDPL 341 (395)
T ss_pred CCc--ccCccc-ccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeCCCCCCCHH
Confidence 000 000000 000000000000000000000 0 00 0000011100 1123466789999999999999999999
Q ss_pred HHHHHHHHhC-CCceEEEEcCCCCccccc-ChHHHHHHHHHHHhhccc
Q 022253 249 VARNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILASLVH 294 (300)
Q Consensus 249 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 294 (300)
.++.+++.+. .+.+++++++++|.++.+ +++++.+.|.+||+++..
T Consensus 342 ~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 342 ASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9999998876 257899999999998776 799999999999997653
No 41
>PLN02511 hydrolase
Probab=99.98 E-value=1.4e-30 Score=208.38 Aligned_cols=265 Identities=14% Similarity=0.093 Sum_probs=164.3
Q ss_pred CcccceeecCCCeEEEE-Ecc----CCCCCCceEEEEcCCCCCchhhH-HHHHHhhhcC-ceEEeecCCCCCCCCCCCCC
Q 022253 20 GMTQRTIEIEPGTILNI-WVP----KKTTKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPD 92 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~-~~~----~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~ 92 (300)
.++++.+.++||..+.+ |.. ..+.++|+||++||+++++...| ..++..+.+. |+|+++|+||||.|......
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~ 149 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ 149 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC
Confidence 45677888999988875 322 12246789999999987765234 4566555444 99999999999999865444
Q ss_pred CChHHHHHHHHHHHHHhCC----cceEEEEEehhHHHHHHHHHhCccc--ccceEEEcccCCCCccchhhhhhccchhhh
Q 022253 93 RTASFQAECMAKGLRKLGV----EKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESVSNAALERIGYESW 166 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (300)
.....+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++...... ....... +...
T Consensus 150 ~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~-~~~~~~~--~~~~ 226 (388)
T PLN02511 150 FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA-DEDFHKG--FNNV 226 (388)
T ss_pred EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH-HHHHhcc--HHHH
Confidence 3345667888888888754 5899999999999999999999987 8888888765532110 0000000 0000
Q ss_pred hhccCcccHHHHHHHHHH---hhcc-CCCChHH------HHHHHHHHHhc---chhhHHHHHHHhhhcccCCCCCCCcce
Q 022253 167 VDFLLPKTADALKVQFDI---ACYK-LPTLPAF------VYKHILEALSD---HRKERIELLQALVISDKEFSIPHFSQK 233 (300)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~P 233 (300)
... .....+...... .... ..++... ...++...+.. ........ +...+....+.+|++|
T Consensus 227 y~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~y---y~~~s~~~~L~~I~vP 300 (388)
T PLN02511 227 YDK---ALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAY---YSNSSSSDSIKHVRVP 300 (388)
T ss_pred HHH---HHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHH---HHHcCchhhhccCCCC
Confidence 000 000001111100 0000 0001000 01111111110 11111111 1122334578889999
Q ss_pred EEEEeeCCCcccCHHHH-HHHHHHhCCCceEEEEcCCCCcccccChHH------HHHHHHHHHhhccc
Q 022253 234 IHLLWGENDKIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLERPFV------YNRQLKTILASLVH 294 (300)
Q Consensus 234 ~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~~~ 294 (300)
+|+|+|++|+++|.+.. ....+..+ ++++++++++||..++|+|+. +.+.+.+|++....
T Consensus 301 tLiI~g~dDpi~p~~~~~~~~~~~~p-~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 301 LLCIQAANDPIAPARGIPREDIKANP-NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred eEEEEcCCCCcCCcccCcHhHHhcCC-CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999997754 44556666 999999999999999999876 58999999987653
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=3.9e-31 Score=180.39 Aligned_cols=252 Identities=15% Similarity=0.109 Sum_probs=178.0
Q ss_pred cCcccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChH
Q 022253 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTAS 96 (300)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~ 96 (300)
...++..+.+ +|++|.|...|. +...|++++|.-++....|.+.+..|.+. +.|+++|.||+|.|..|......+
T Consensus 19 ~~~te~kv~v-ng~ql~y~~~G~--G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ 95 (277)
T KOG2984|consen 19 SDYTESKVHV-NGTQLGYCKYGH--GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQ 95 (277)
T ss_pred chhhhheeee-cCceeeeeecCC--CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHH
Confidence 3456677777 799999999885 45689999998877766888888776655 999999999999999888776655
Q ss_pred HH---HHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcc
Q 022253 97 FQ---AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (300)
Q Consensus 97 ~~---~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (300)
.+ +++...+++.++.+++.++|+|-||..|+..|+++++.|..+|+.+.....................+...
T Consensus 96 ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r---- 171 (277)
T KOG2984|consen 96 FFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSAR---- 171 (277)
T ss_pred HHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhh----
Confidence 54 56677888999999999999999999999999999999999999998765433221111100000000000
Q ss_pred cHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhh-hcccCCCCCCCcceEEEEeeCCCcccCHHHHHH
Q 022253 174 TADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALV-ISDKEFSIPHFSQKIHLLWGENDKIFDMQVARN 252 (300)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 252 (300)
..+..... .-++.+...+ ..+. .....+..+. ..-.+..+++++||++|++|+.|++++......
T Consensus 172 ~R~P~e~~---------Yg~e~f~~~w-a~wv----D~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f 237 (277)
T KOG2984|consen 172 GRQPYEDH---------YGPETFRTQW-AAWV----DVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF 237 (277)
T ss_pred hcchHHHh---------cCHHHHHHHH-HHHH----HHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc
Confidence 00000000 0011111111 1100 0001111111 111335789999999999999999999888888
Q ss_pred HHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 253 LKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 253 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+....+ .+++.+.|.++|.+++..+++|+..+.+||++.
T Consensus 238 i~~~~~-~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 238 IPVLKS-LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhhhcc-cceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 888887 999999999999999999999999999999864
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=5e-30 Score=187.15 Aligned_cols=266 Identities=17% Similarity=0.123 Sum_probs=176.8
Q ss_pred cccceeecCCCeEEEEEccCC---CCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCC-CCh
Q 022253 21 MTQRTIEIEPGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTA 95 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~---~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~-~~~ 95 (300)
.....++..+|.++.+..+.+ .+.+..|+++||+++.....|..++..|+.. |.|+++|++|||.|++.... .++
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 345566777898888654433 2455689999999988732888899999998 99999999999999977644 688
Q ss_pred HHHHHHHHHHHHHhC------CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhc
Q 022253 96 SFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDF 169 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (300)
+..++|+....+... ..+..++||||||.+++.++.++|+..+++|+++|.+...+...+..........+...
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~l 186 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKL 186 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHh
Confidence 889999999988752 23789999999999999999999999999999999987655443222111111110000
Q ss_pred cCcccHHHHHHHHHHhhccCCCChHHHHHHHHHH-Hh-cchh-hHHHHHHHhh-hcccCCCCCCCcceEEEEeeCCCccc
Q 022253 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEA-LS-DHRK-ERIELLQALV-ISDKEFSIPHFSQKIHLLWGENDKIF 245 (300)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~ 245 (300)
.+... . ..........+.+...+..... -. .... .....++-+. ..+....+.++++|.+++||+.|.++
T Consensus 187 -iP~wk-~----vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VT 260 (313)
T KOG1455|consen 187 -IPTWK-I----VPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVT 260 (313)
T ss_pred -CCcee-e----cCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCccc
Confidence 00000 0 0000000000000111111110 00 1111 1111111111 12233678899999999999999999
Q ss_pred CHHHHHHHHHHhC-CCceEEEEcCCCCcccc----cChHHHHHHHHHHHhhc
Q 022253 246 DMQVARNLKEQVG-QNATMESIEKAGHLVNL----ERPFVYNRQLKTILASL 292 (300)
Q Consensus 246 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 292 (300)
+++.++.+++..+ .+.++..|||.-|.++. ++-+.|...|.+||+++
T Consensus 261 Dp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 261 DPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999886 47899999999999875 35567888899999864
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=1.4e-29 Score=215.90 Aligned_cols=257 Identities=16% Similarity=0.170 Sum_probs=160.7
Q ss_pred CCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHH
Q 022253 29 EPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGL 106 (300)
Q Consensus 29 ~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i 106 (300)
.||.+++|+..++ +++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|+.+. ..++.+++++|+..++
T Consensus 10 ~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i 87 (582)
T PRK05855 10 SDGVRLAVYEWGD-PDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVI 87 (582)
T ss_pred eCCEEEEEEEcCC-CCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 3899999988875 45789999999999999 999999999777999999999999998654 3578999999999999
Q ss_pred HHhCCcc-eEEEEEehhHHHHHHHHHhC--cccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHH
Q 022253 107 RKLGVEK-CTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFD 183 (300)
Q Consensus 107 ~~~~~~~-~~lvG~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (300)
+.++.++ ++|+||||||.+++.++.+. ++++..++.++++.... ......... ....................
T Consensus 88 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (582)
T PRK05855 88 DAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH---VGFWLRSGL-RRPTPRRLARALGQLLRSWY 163 (582)
T ss_pred HHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH---HHHHHhhcc-cccchhhhhHHHHHHhhhHH
Confidence 9998765 99999999999999887762 34455555444322100 000000000 00000000000000000000
Q ss_pred HhhccCCCChH--------HHHHHHHHHHh-------------cchhhHHHHH-HHhhhcccCCCCCCCcceEEEEeeCC
Q 022253 184 IACYKLPTLPA--------FVYKHILEALS-------------DHRKERIELL-QALVISDKEFSIPHFSQKIHLLWGEN 241 (300)
Q Consensus 184 ~~~~~~~~~~~--------~~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~i~~P~l~i~g~~ 241 (300)
.........+. ........... .........+ ..............+++|+++|+|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~ 243 (582)
T PRK05855 164 IYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTG 243 (582)
T ss_pred HHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCC
Confidence 00000000000 00000000000 0000000011 11111111223556899999999999
Q ss_pred CcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhcc
Q 022253 242 DKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 293 (300)
Q Consensus 242 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 293 (300)
|.+++.+..+.+.+.++ +.++++++ +||+++.|+|+++++.|.+|+.+..
T Consensus 244 D~~v~~~~~~~~~~~~~-~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 244 DPYVRPALYDDLSRWVP-RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CcccCHHHhccccccCC-cceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 99999999998888887 78888886 6999999999999999999998754
No 45
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=1.3e-28 Score=171.01 Aligned_cols=224 Identities=21% Similarity=0.287 Sum_probs=160.6
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCcceEEEEE
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGV 119 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~lvG~ 119 (300)
++..||||||+.|+.. ..+.+.+.|.++ |.|.+|.+||||.....--..++++|.+++.+..+.+ +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 3589999999999999 999999999999 9999999999998775555678888877777766665 6789999999
Q ss_pred ehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHH
Q 022253 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKH 199 (300)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (300)
||||.+++.+|.++| ++++|.++++........ . .+.+...+..... ....+.+..+.
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~--i-----------------ie~~l~y~~~~kk-~e~k~~e~~~~ 150 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI--I-----------------IEGLLEYFRNAKK-YEGKDQEQIDK 150 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchh--h-----------------hHHHHHHHHHhhh-ccCCCHHHHHH
Confidence 999999999999998 899999998865322110 0 0011111111110 01112222333
Q ss_pred HHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC-CCceEEEEcCCCCccccc-C
Q 022253 200 ILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLE-R 277 (300)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~ 277 (300)
.+..+..........+..+. .+....+..|..|++++.|.+|+.+|.+.+..+.+... ...++.+++++||.+..+ .
T Consensus 151 e~~~~~~~~~~~~~~~~~~i-~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E 229 (243)
T COG1647 151 EMKSYKDTPMTTTAQLKKLI-KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE 229 (243)
T ss_pred HHHHhhcchHHHHHHHHHHH-HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh
Confidence 33332211111111111111 12335678899999999999999999999999998876 467999999999998774 7
Q ss_pred hHHHHHHHHHHHhh
Q 022253 278 PFVYNRQLKTILAS 291 (300)
Q Consensus 278 ~~~~~~~i~~fl~~ 291 (300)
.+.+.+.|..||+.
T Consensus 230 rd~v~e~V~~FL~~ 243 (243)
T COG1647 230 RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHHHhhC
Confidence 88999999999973
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.96 E-value=1.1e-27 Score=177.96 Aligned_cols=243 Identities=17% Similarity=0.181 Sum_probs=167.6
Q ss_pred CCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----Ccc
Q 022253 40 KKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----VEK 113 (300)
Q Consensus 40 ~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~----~~~ 113 (300)
.+....|+++++||+.++.. .|+.+...|++. ..|+++|.|.||.|... ...+...+++|+..+++..+ ..+
T Consensus 47 ~~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 47 ENLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred cccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHcccccccCC
Confidence 33457899999999999999 999999999987 89999999999999864 34568999999999999984 578
Q ss_pred eEEEEEehhH-HHHHHHHHhCcccccceEEEcccCCCCccchhh---hhhccchhhhhhccCcccHHHHHHHHHHhhccC
Q 022253 114 CTLVGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA---ALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (300)
Q Consensus 114 ~~lvG~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (300)
++++|||||| .+++..+...|+.+..+|+++-.+......... .+..+...................+..
T Consensus 125 ~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~------ 198 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIE------ 198 (315)
T ss_pred ceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHH------
Confidence 9999999999 777788888999999999998776422211111 111111000000000111111111111
Q ss_pred CCChHHHHHHHHHHHh------------cchhhHHHHHHHhhhcccCCCC--CCCcceEEEEeeCCCcccCHHHHHHHHH
Q 022253 190 PTLPAFVYKHILEALS------------DHRKERIELLQALVISDKEFSI--PHFSQKIHLLWGENDKIFDMQVARNLKE 255 (300)
Q Consensus 190 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 255 (300)
...+.....++...+ .+.......+..+........+ .....||+++.|.++.+++.+....+.+
T Consensus 199 -~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~ 277 (315)
T KOG2382|consen 199 -VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEK 277 (315)
T ss_pred -HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHH
Confidence 011111222222211 1222233333332222222222 6678999999999999999999999999
Q ss_pred HhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 256 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 256 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.+| +++++.++++||+++.|+|+++.+.|.+|++..
T Consensus 278 ~fp-~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 278 IFP-NVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred hcc-chheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 998 999999999999999999999999999999865
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=5.6e-28 Score=191.64 Aligned_cols=262 Identities=16% Similarity=0.213 Sum_probs=168.4
Q ss_pred CCeEEEEEccCCC--CCCceEEEEcCCCCCchh------------hHHHHH---HhhhcC-ceEEeecCCCCCCCCCC--
Q 022253 30 PGTILNIWVPKKT--TKKHAVVLLHPFGFDGIL------------TWQFQV---LALAKT-YEVYVPDFLFFGSSVTD-- 89 (300)
Q Consensus 30 ~g~~l~~~~~~~~--~~~~~vv~lhG~~~~~~~------------~~~~~~---~~l~~~-~~v~~~d~~G~G~s~~~-- 89 (300)
...++.|..+|.. ...++||++|++.+++.. .|..++ ..|..+ |.||++|..|-|.|..|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 3467889998862 346899999999886420 266665 346555 99999999987653211
Q ss_pred -------------------CCCCChHHHHHHHHHHHHHhCCcceE-EEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 90 -------------------RPDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 90 -------------------~~~~~~~~~~~~~~~~i~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
.+.++++++++++..++++++++++. ++||||||++++.+|.++|++|+++|++++....
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 12378999999999999999999986 9999999999999999999999999999887654
Q ss_pred Cccchhhhhh----ccchh-hhh--hcc---Cc-ccHHHHHHH----------HHHhhccCC--C-------ChHHHHHH
Q 022253 150 TESVSNAALE----RIGYE-SWV--DFL---LP-KTADALKVQ----------FDIACYKLP--T-------LPAFVYKH 199 (300)
Q Consensus 150 ~~~~~~~~~~----~~~~~-~~~--~~~---~~-~~~~~~~~~----------~~~~~~~~~--~-------~~~~~~~~ 199 (300)
.......... .+... .+. .+. .+ ......+.. +...+.+.. . ......+.
T Consensus 199 ~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~ 278 (389)
T PRK06765 199 DAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEK 278 (389)
T ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHH
Confidence 3221000000 00000 000 000 00 000001110 111111100 0 00011223
Q ss_pred HHHHHh------cchhhHHHHHHHhhhcc-------cCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC---CCceE
Q 022253 200 ILEALS------DHRKERIELLQALVISD-------KEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG---QNATM 263 (300)
Q Consensus 200 ~~~~~~------~~~~~~~~~~~~~~~~~-------~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 263 (300)
++.... .+......+...+...+ ....+.++++|+++|+|++|.++|++..+.+.+.++ +++++
T Consensus 279 yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l 358 (389)
T PRK06765 279 EINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEV 358 (389)
T ss_pred HHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEE
Confidence 332221 11222223333333222 234566899999999999999999999999999886 26899
Q ss_pred EEEcC-CCCcccccChHHHHHHHHHHHhh
Q 022253 264 ESIEK-AGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 264 ~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
+++++ +||+.++++|+++++.|.+||++
T Consensus 359 ~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 359 YEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99985 89999999999999999999975
No 48
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=3.6e-27 Score=177.33 Aligned_cols=240 Identities=15% Similarity=0.170 Sum_probs=152.0
Q ss_pred ccceeecCCCeEEEEEccCC----CCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCC-CCCCCCCCCCCh
Q 022253 22 TQRTIEIEPGTILNIWVPKK----TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTA 95 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~----~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~ 95 (300)
..+.+.+.||.+|+.|...+ ..+.++||++||++++.. .|..+++.|+++ |.|+.+|+||+ |.|++.....+.
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 34667888999998655433 234578999999999887 899999999998 99999999988 999776555555
Q ss_pred HHHHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCc
Q 022253 96 SFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (300)
Q Consensus 96 ~~~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (300)
.....|+.++++.+ +.+++.|+||||||.+|+..|... .++++|+.+|................ ..+.....+
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~--~~~p~~~lp 164 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDY--LSLPIDELP 164 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhccc--ccCcccccc
Confidence 55567776666665 456899999999999997777643 38999999988763321111000000 000000000
Q ss_pred ccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHH
Q 022253 173 KTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARN 252 (300)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 252 (300)
.... +...... ...++......... ........+.++++|+|+|||++|.+||.+.++.
T Consensus 165 ~~~d----------~~g~~l~---~~~f~~~~~~~~~~--------~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 165 EDLD----------FEGHNLG---SEVFVTDCFKHGWD--------TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred cccc----------ccccccc---HHHHHHHHHhcCcc--------ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHH
Confidence 0000 0000000 01111110000000 0000112345678999999999999999999999
Q ss_pred HHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 253 LKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 253 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+.+.++ .+++++.++|++|.+. |++- .+++|.+++
T Consensus 224 l~e~~~s~~kkl~~i~Ga~H~l~-~~~~----~~~~~~~~~ 259 (307)
T PRK13604 224 LLDSIRSEQCKLYSLIGSSHDLG-ENLV----VLRNFYQSV 259 (307)
T ss_pred HHHHhccCCcEEEEeCCCccccC-cchH----HHHHHHHHH
Confidence 999885 4799999999999874 4433 344555544
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.96 E-value=2.7e-27 Score=186.00 Aligned_cols=270 Identities=12% Similarity=0.056 Sum_probs=155.4
Q ss_pred CcccceeecCCCeEEEEEcc-C--CCCCCceEEEEcCCCCCchh-hHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCC
Q 022253 20 GMTQRTIEIEPGTILNIWVP-K--KTTKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT 94 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~-~--~~~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~ 94 (300)
..+.+.++++||..+.+... . ....+|+||++||++++... ....+++.|.++ |+|+++|+||||.+........
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 34567788889977654322 1 22357899999999887541 345678888888 9999999999997754322111
Q ss_pred hHHHHHHHHHHH----HHhCCcceEEEEEehhHHHHHHHHHhCccc--ccceEEEcccCCCCccchhhhhhccchhhhhh
Q 022253 95 ASFQAECMAKGL----RKLGVEKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVTCSVMGLTESVSNAALERIGYESWVD 168 (300)
Q Consensus 95 ~~~~~~~~~~~i----~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (300)
.....+|+..++ +.++..+++++||||||.++..++..+++. +.++|+++++........ ............
T Consensus 110 ~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~--~~~~~~~~~~~~ 187 (324)
T PRK10985 110 HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY--RMEQGFSRVYQR 187 (324)
T ss_pred CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH--HHhhhHHHHHHH
Confidence 111234444433 345667899999999999988888877543 889999988765321110 000000000000
Q ss_pred ccCcccHHHHHHHHHHhhccCCCChHHH------HHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCC
Q 022253 169 FLLPKTADALKVQFDIACYKLPTLPAFV------YKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 242 (300)
.+............... ......+.+. ..++-................+...+....+.++++|+++|+|++|
T Consensus 188 ~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D 266 (324)
T PRK10985 188 YLLNLLKANAARKLAAY-PGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDD 266 (324)
T ss_pred HHHHHHHHHHHHHHHhc-cccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCC
Confidence 00000000000111100 0000011110 1111111111111111112222222233566889999999999999
Q ss_pred cccCHHHHHHHHHHhCCCceEEEEcCCCCcccccCh-----HHHHHHHHHHHhhcc
Q 022253 243 KIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP-----FVYNRQLKTILASLV 293 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 293 (300)
++++.+....+.+..+ +.++++++++||+.+++.. ....+.+.+|+....
T Consensus 267 ~~~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 267 PFMTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CCCChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 9999888877766665 8999999999999998742 356777888887654
No 50
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.96 E-value=3.4e-27 Score=185.30 Aligned_cols=251 Identities=13% Similarity=0.135 Sum_probs=157.5
Q ss_pred eecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhH-------------------------HHHHHhhhcC-ceEEeec
Q 022253 26 IEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTW-------------------------QFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 26 i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~-------------------------~~~~~~l~~~-~~v~~~d 79 (300)
+...||.+|+++.+.++..+.+|+++||++++....| ..+++.|.+. |.|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 3445899998877655456779999999998875111 3578899887 9999999
Q ss_pred CCCCCCCCCCCC---C-CChHHHHHHHHHHHHHhC------------------------CcceEEEEEehhHHHHHHHHH
Q 022253 80 FLFFGSSVTDRP---D-RTASFQAECMAKGLRKLG------------------------VEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 80 ~~G~G~s~~~~~---~-~~~~~~~~~~~~~i~~~~------------------------~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+||||.|..... . .+++++++|+..+++.+. ..|++++||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 999999986421 1 478889999999988642 247999999999999999987
Q ss_pred hCcc--------cccceEEEcccCCCCccc------hhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCC--hHH
Q 022253 132 MYPD--------LVESMVVTCSVMGLTESV------SNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTL--PAF 195 (300)
Q Consensus 132 ~~p~--------~v~~~vl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 195 (300)
.+++ .++++|+++|........ ....... .......+.+.... ....+. .+.
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~--l~~~~~~~~p~~~~----------~~~~~~~~~~~ 229 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLP--VMNFMSRVFPTFRI----------SKKIRYEKSPY 229 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCCcchhhhhHHH--HHHHHHHHCCcccc----------cCccccccChh
Confidence 6542 588999888875321100 0000000 00000000000000 000000 000
Q ss_pred HHHHHHHHHh-c----chhhHHHHHHHhhhcccCCCCCCC--cceEEEEeeCCCcccCHHHHHHHHHHhC-CCceEEEEc
Q 022253 196 VYKHILEALS-D----HRKERIELLQALVISDKEFSIPHF--SQKIHLLWGENDKIFDMQVARNLKEQVG-QNATMESIE 267 (300)
Q Consensus 196 ~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~ 267 (300)
..+.+...-. . .......+...... ....+..+ ++|+|+++|++|.+++++.++.+.+.+. ++.++.+++
T Consensus 230 ~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~ 307 (332)
T TIGR01607 230 VNDIIKFDKFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLE 307 (332)
T ss_pred hhhHHhcCccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEEC
Confidence 1111100000 0 00111111111111 11123334 7899999999999999999998887764 368999999
Q ss_pred CCCCcccccC-hHHHHHHHHHHHh
Q 022253 268 KAGHLVNLER-PFVYNRQLKTILA 290 (300)
Q Consensus 268 ~~gH~~~~~~-~~~~~~~i~~fl~ 290 (300)
+++|.++.|. ++++.+.|.+||+
T Consensus 308 g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 308 DMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999999874 6889999999986
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=1e-26 Score=186.81 Aligned_cols=239 Identities=10% Similarity=0.039 Sum_probs=152.9
Q ss_pred cccceeecCCCeEEEEE--ccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHH
Q 022253 21 MTQRTIEIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~--~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~ 97 (300)
++...+...+|.++..+ .+...++.|+||++||+++.....|..+++.|+++ |.|+++|+||+|.|.......+...
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~ 247 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSL 247 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHH
Confidence 44555566677677643 33322456677777776665432788888889887 9999999999999975432233444
Q ss_pred HHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCccc
Q 022253 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (300)
Q Consensus 98 ~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (300)
...++.+++... +.+++.++|||+||.+++.+|..+|++++++|+++++.......... ... .
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~-~~~-------------~ 313 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKR-QQQ-------------V 313 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhh-hhh-------------c
Confidence 445555555554 55789999999999999999999999999999999875311000000 000 0
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHH
Q 022253 175 ADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLK 254 (300)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 254 (300)
.......+....... ..........+ ..+..........++++|+|+|+|++|.++|.+.++.+.
T Consensus 314 p~~~~~~la~~lg~~-~~~~~~l~~~l--------------~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~ 378 (414)
T PRK05077 314 PEMYLDVLASRLGMH-DASDEALRVEL--------------NRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIA 378 (414)
T ss_pred hHHHHHHHHHHhCCC-CCChHHHHHHh--------------hhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHH
Confidence 000011111100000 01111111111 000000000012568999999999999999999999998
Q ss_pred HHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 255 EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 255 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+..+ +.++++++++ ++.+.++++.+.|.+||++.
T Consensus 379 ~~~~-~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 379 SSSA-DGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred HhCC-CCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 8887 8999999985 45679999999999999875
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.95 E-value=1.8e-25 Score=171.34 Aligned_cols=239 Identities=12% Similarity=0.068 Sum_probs=143.7
Q ss_pred CCeEEEE--EccCCCCCCceEEEEcCCCC----CchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 022253 30 PGTILNI--WVPKKTTKKHAVVLLHPFGF----DGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (300)
Q Consensus 30 ~g~~l~~--~~~~~~~~~~~vv~lhG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 102 (300)
+|.++.- ..+.. .++++||++||+++ +.. .|..+++.|+++ |.|+++|+||||.|.... .+++.+.+|+
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~ 85 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADI 85 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHH
Confidence 5666652 33332 34667888888663 333 567788999887 999999999999987532 4667778888
Q ss_pred HHHHHHh-----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHH
Q 022253 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (300)
Q Consensus 103 ~~~i~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (300)
.++++.+ +.++++++|||+||.+++.+|.. +++|+++|+++|................ ....... .
T Consensus 86 ~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~----~~~~~~~--~-- 156 (274)
T TIGR03100 86 AAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHY----YLGQLLS--A-- 156 (274)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHH----HHHHHhC--h--
Confidence 8888877 45779999999999999999765 4679999999987542221111111000 0000000 0
Q ss_pred HHHHHHHhhccCCCChHHHHHHHHHHHh-----cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHH--
Q 022253 178 LKVQFDIACYKLPTLPAFVYKHILEALS-----DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVA-- 250 (300)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~-- 250 (300)
....... ...+........+..... .......... .+....+.++++|+++++|+.|...+ ...
T Consensus 157 --~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~ 227 (274)
T TIGR03100 157 --DFWRKLL-SGEVNLGSSLRGLGDALLKARQKGDEVAHGGLA-----ERMKAGLERFQGPVLFILSGNDLTAQ-EFADS 227 (274)
T ss_pred --HHHHHhc-CCCccHHHHHHHHHHHHHhhhhcCCCcccchHH-----HHHHHHHHhcCCcEEEEEcCcchhHH-HHHHH
Confidence 0101011 111111111111111000 0000000000 11112445678999999999998864 322
Q ss_pred ----HHHHHHhC-CCceEEEEcCCCCccccc-ChHHHHHHHHHHHh
Q 022253 251 ----RNLKEQVG-QNATMESIEKAGHLVNLE-RPFVYNRQLKTILA 290 (300)
Q Consensus 251 ----~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 290 (300)
....+.+. ++++++.+++++|++..+ .++++.+.|.+||+
T Consensus 228 ~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 228 VLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 44455452 389999999999998554 55899999999996
No 53
>PLN02872 triacylglycerol lipase
Probab=99.94 E-value=6.7e-25 Score=174.11 Aligned_cols=274 Identities=16% Similarity=0.177 Sum_probs=167.3
Q ss_pred CcccceeecCCCeEEEEEccC-C-----CCCCceEEEEcCCCCCchhhHH------HHHHhhhcC-ceEEeecCCCCCCC
Q 022253 20 GMTQRTIEIEPGTILNIWVPK-K-----TTKKHAVVLLHPFGFDGILTWQ------FQVLALAKT-YEVYVPDFLFFGSS 86 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~-~-----~~~~~~vv~lhG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~G~G~s 86 (300)
..+++.+.++||..|...... . ...+|+||++||+++++. .|. .++..|+++ |+|+++|+||++.|
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s 121 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVGNVRGTRWS 121 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccccccccccc
Confidence 467888999999998865532 1 124689999999998888 773 345567776 99999999998865
Q ss_pred CCC-------C--CCCChHHHH-HHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcc---cccceEEEcccCCCC
Q 022253 87 VTD-------R--PDRTASFQA-ECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLT 150 (300)
Q Consensus 87 ~~~-------~--~~~~~~~~~-~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~ 150 (300)
... . ..+++++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+.+++++|.....
T Consensus 122 ~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~ 200 (395)
T PLN02872 122 YGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLD 200 (395)
T ss_pred cCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhc
Confidence 321 1 136777887 7999999986 347999999999999998555 5676 688999999886542
Q ss_pred ccchhhh--hhccchhhhh-----hccCcccHHHHHHH--------------HHHhhccCCCChHHHHHH----------
Q 022253 151 ESVSNAA--LERIGYESWV-----DFLLPKTADALKVQ--------------FDIACYKLPTLPAFVYKH---------- 199 (300)
Q Consensus 151 ~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~---------- 199 (300)
....... ........+. ..+.+.. ..+..+ +.........+.......
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS 279 (395)
T PLN02872 201 HVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS-DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSS 279 (395)
T ss_pred cCCCHHHHHHHHHhHHHHHHHhcCceecCCc-HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcch
Confidence 2111110 0000000000 0000110 001100 000000000111111111
Q ss_pred ------HHHHHhcch----h-hHHHHHHHhh-hcccCCCCCCC--cceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEE
Q 022253 200 ------ILEALSDHR----K-ERIELLQALV-ISDKEFSIPHF--SQKIHLLWGENDKIFDMQVARNLKEQVGQNATMES 265 (300)
Q Consensus 200 ------~~~~~~~~~----~-~~~~~~~~~~-~~~~~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
+.+...... . ........+. ...+...+.++ ++|+++++|++|.+++++..+.+.+.++...+++.
T Consensus 280 ~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~ 359 (395)
T PLN02872 280 VKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLY 359 (395)
T ss_pred HHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEE
Confidence 111111000 0 0000000010 11223456677 57999999999999999999999999984468889
Q ss_pred EcCCCCcc---cccChHHHHHHHHHHHhhccccc
Q 022253 266 IEKAGHLV---NLERPFVYNRQLKTILASLVHAN 296 (300)
Q Consensus 266 ~~~~gH~~---~~~~~~~~~~~i~~fl~~~~~~~ 296 (300)
+++++|.. ..+.|+++.+.|.+|+++..+.+
T Consensus 360 l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~~ 393 (395)
T PLN02872 360 LENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKSS 393 (395)
T ss_pred cCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhcc
Confidence 99999963 34889999999999999765543
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.94 E-value=3.8e-26 Score=172.18 Aligned_cols=212 Identities=22% Similarity=0.285 Sum_probs=133.1
Q ss_pred ceEEeecCCCCCCCCC----CCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 73 YEVYVPDFLFFGSSVT----DRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
|+|+++|+||+|.|+. ....++.+++++++..+++.++.++++++||||||.+++.+|..+|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 236689999999999999999999999999999999999999999999999999998631
Q ss_pred ----CCccchhh-hhhccchhhhhhccCcccHHHHHHHH----HHhhccCCCChHHHHHHHHHHHhcchhhHH----HHH
Q 022253 149 ----LTESVSNA-ALERIGYESWVDFLLPKTADALKVQF----DIACYKLPTLPAFVYKHILEALSDHRKERI----ELL 215 (300)
Q Consensus 149 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 215 (300)
........ .......................... ....................... ...... ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFA-ETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTC-HHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHH-HHHHHhhhccccc
Confidence 00000000 00000000000000000000000000 00000000000000000000000 000000 011
Q ss_pred HHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHH
Q 022253 216 QALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLK 286 (300)
Q Consensus 216 ~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 286 (300)
......+....+.++++|+++++|++|.++|++....+.+.++ +.++++++++||+.++++|+++++.|.
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 1122222334566799999999999999999999999999998 899999999999999999999999875
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.94 E-value=1.2e-24 Score=156.75 Aligned_cols=183 Identities=19% Similarity=0.136 Sum_probs=127.2
Q ss_pred ceEEEEcCCCCCchhhHHH--HHHhhhc---CceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEe
Q 022253 46 HAVVLLHPFGFDGILTWQF--QVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S 120 (300)
|+||++||++++.. .|.. +.+.+.+ .|+|+++|+||++ ++.++++.++++.++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999999 8874 3455654 4999999999984 4678899999999999999999999
Q ss_pred hhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHH
Q 022253 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (300)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (300)
+||.+++.+|.++|. .+|+++|....... .....+.. ... .......+.
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~~----~~~~~~~~--~~~---------------~~~~~~~~~------- 118 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFEL----LTDYLGEN--ENP---------------YTGQQYVLE------- 118 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHHH----HHHhcCCc--ccc---------------cCCCcEEEc-------
Confidence 999999999999983 46888886541110 00000000 000 000000000
Q ss_pred HHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHH
Q 022253 201 LEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFV 280 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 280 (300)
...+......+... +. .++|+++++|++|.++|.+.+..+.+. ++.+.++|++|.+ ++.++
T Consensus 119 -----------~~~~~d~~~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~ 179 (190)
T PRK11071 119 -----------SRHIYDLKVMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFER 179 (190)
T ss_pred -----------HHHHHHHHhcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHH
Confidence 11111111111222 33 778899999999999999999999873 4677889999987 45588
Q ss_pred HHHHHHHHHh
Q 022253 281 YNRQLKTILA 290 (300)
Q Consensus 281 ~~~~i~~fl~ 290 (300)
+.+.+.+|+.
T Consensus 180 ~~~~i~~fl~ 189 (190)
T PRK11071 180 YFNQIVDFLG 189 (190)
T ss_pred hHHHHHHHhc
Confidence 9999999975
No 56
>PRK10566 esterase; Provisional
Probab=99.93 E-value=5.4e-24 Score=162.06 Aligned_cols=213 Identities=15% Similarity=0.151 Sum_probs=131.3
Q ss_pred EEEEccCC-CCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCCh-------HHHHHHHHH
Q 022253 34 LNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-------SFQAECMAK 104 (300)
Q Consensus 34 l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-------~~~~~~~~~ 104 (300)
++|...+. +++.|+||++||++++.. .|..+++.|++. |.|+++|+||||.+......... ....+|+.+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 44444332 235689999999999988 899999999887 99999999999976432211111 122344444
Q ss_pred HHHHh------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHH
Q 022253 105 GLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL 178 (300)
Q Consensus 105 ~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (300)
+++.+ +.++++++|||+||.+++.++.++|+....++++++... . .... ...+.
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~-----~~~~---------~~~~~----- 153 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-T-----SLAR---------TLFPP----- 153 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-H-----HHHH---------Hhccc-----
Confidence 44443 346899999999999999999988874334444433211 0 0000 00000
Q ss_pred HHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCC-cceEEEEeeCCCcccCHHHHHHHHHHh
Q 022253 179 KVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHF-SQKIHLLWGENDKIFDMQVARNLKEQV 257 (300)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~ 257 (300)
....... ..... ......+...+....+.++ ++|+|+++|++|.+++.+.++.+.+.+
T Consensus 154 ------~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l 212 (249)
T PRK10566 154 ------LIPETAA-QQAEF--------------NNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL 212 (249)
T ss_pred ------ccccccc-cHHHH--------------HHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 0000000 00000 0001111111112234455 689999999999999999999998887
Q ss_pred CC-----CceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 258 GQ-----NATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 258 ~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.. +.++..++++||.+. ....+.+.+||++.
T Consensus 213 ~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 213 RERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred HhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 62 257778999999863 34678889999864
No 57
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.93 E-value=1.6e-23 Score=170.66 Aligned_cols=244 Identities=14% Similarity=0.090 Sum_probs=152.3
Q ss_pred CCeEEEEEccCCC-CCCceEEEEcCCCCCchhhHH-----HHHHhhhcC-ceEEeecCCCCCCCCCCC--CCCChHHHHH
Q 022253 30 PGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQ-----FQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRTASFQAE 100 (300)
Q Consensus 30 ~g~~l~~~~~~~~-~~~~~vv~lhG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~~~~~~~~~ 100 (300)
+-.++..+.+..+ ..++|||++||+..... .|+ .+++.|.++ |+|+++|++|+|.+.... .++..+.+.+
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~ 250 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIA 250 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHH
Confidence 3345544444432 36789999999987777 775 788999887 999999999999886532 2344445566
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHH----HHHHhC-cccccceEEEcccCCCCccchhhhhh-ccch---hhh-----
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGF----KMAEMY-PDLVESMVVTCSVMGLTESVSNAALE-RIGY---ESW----- 166 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~----~~a~~~-p~~v~~~vl~~~~~~~~~~~~~~~~~-~~~~---~~~----- 166 (300)
.+..+++.++.++++++|||+||.++. .+++.+ +++|++++++++...+........+. .... ...
T Consensus 251 al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 251 ALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred HHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcC
Confidence 677777778889999999999999852 245555 78899999999987765332111100 0000 000
Q ss_pred ----------hhccCcccHHHHHHHHHHhhcc--------------CCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcc
Q 022253 167 ----------VDFLLPKTADALKVQFDIACYK--------------LPTLPAFVYKHILEALSDHRKERIELLQALVISD 222 (300)
Q Consensus 167 ----------~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (300)
...+.+. .......+...... ...++.+...++++.++...... ...+...+
T Consensus 331 ~lpg~~m~~~F~~lrp~-~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~---~G~~~v~g 406 (532)
T TIGR01838 331 YLDGRQMAVTFSLLREN-DLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT---TGGLEVCG 406 (532)
T ss_pred CCCHHHHHHHHHhcChh-hHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc---CCeeEECC
Confidence 0000000 00011111111111 11223333333333322111100 01111223
Q ss_pred cCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChH
Q 022253 223 KEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPF 279 (300)
Q Consensus 223 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 279 (300)
....+.+|++|+++|+|++|.++|.+.+..+.+.++ +.+..+++++||.+++++|.
T Consensus 407 ~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 407 VRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-CCEEEEECCCCCchHhhCCC
Confidence 346788899999999999999999999999999998 88888999999999988765
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=5.2e-23 Score=163.67 Aligned_cols=267 Identities=15% Similarity=0.165 Sum_probs=155.9
Q ss_pred Ccccceeec-CCCeEEEEEccCC-CCCCceEEEEcCCCCCchhhH-----HHHHHhhhcC-ceEEeecCCCCCCCCCCCC
Q 022253 20 GMTQRTIEI-EPGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRP 91 (300)
Q Consensus 20 ~~~~~~i~~-~~g~~l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~ 91 (300)
|.+...+.. .++..++.+.+.. ...+++||++||+..+.. .+ ..+++.|.++ |+|+++|++|+|.|+.
T Consensus 35 ~~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~--- 110 (350)
T TIGR01836 35 GVTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR--- 110 (350)
T ss_pred CCCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccce-eccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---
Confidence 344444333 3566776555432 234668999999876554 43 5789999888 9999999999998753
Q ss_pred CCChHHHHHH-HH----HHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchh--hhhhccchh
Q 022253 92 DRTASFQAEC-MA----KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSN--AALERIGYE 164 (300)
Q Consensus 92 ~~~~~~~~~~-~~----~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~--~~~~~~~~~ 164 (300)
..+.++++.+ +. .+++..+.++++++|||+||.+++.+++.+|++|+++|+++++......... .........
T Consensus 111 ~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~ 190 (350)
T TIGR01836 111 YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDID 190 (350)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHH
Confidence 3455555432 44 4444557789999999999999999999999999999999988765332110 000011000
Q ss_pred hhhhccCcccHHHHHHHHHHhhc-----------cCCCChHHHHHHHHH--HHhc-c----hhhHHHHHHHhhhc-----
Q 022253 165 SWVDFLLPKTADALKVQFDIACY-----------KLPTLPAFVYKHILE--ALSD-H----RKERIELLQALVIS----- 221 (300)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~-~----~~~~~~~~~~~~~~----- 221 (300)
........-........+..... ......++....+.. .+.. . ......+...+...
T Consensus 191 ~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~ 270 (350)
T TIGR01836 191 LAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN 270 (350)
T ss_pred HHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC
Confidence 00000000000000000000000 000001111111111 0000 0 01111111111110
Q ss_pred ------ccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCC-CceEEEEcCCCCcccccC---hHHHHHHHHHHHhh
Q 022253 222 ------DKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLER---PFVYNRQLKTILAS 291 (300)
Q Consensus 222 ------~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 291 (300)
.....+.++++|+++++|++|.++|++.++.+.+.++. +.++++++ +||..++.+ ++++.+.|.+|+.+
T Consensus 271 g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 271 GEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 11234678899999999999999999999999998873 45667777 799887753 47899999999975
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.92 E-value=9.9e-23 Score=181.48 Aligned_cols=263 Identities=19% Similarity=0.209 Sum_probs=162.4
Q ss_pred CCeEEEEEccCC-----CCCCceEEEEcCCCCCchhhHHHH-----HHhhhcC-ceEEeecCCCCCCCCCCCC--CCChH
Q 022253 30 PGTILNIWVPKK-----TTKKHAVVLLHPFGFDGILTWQFQ-----VLALAKT-YEVYVPDFLFFGSSVTDRP--DRTAS 96 (300)
Q Consensus 30 ~g~~l~~~~~~~-----~~~~~~vv~lhG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~G~G~s~~~~~--~~~~~ 96 (300)
+-.++..|.+.. +..++||||+||++.+.. .|+.. ++.|.++ |+|+++|+ |.++.+.. ..++.
T Consensus 47 ~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~ 122 (994)
T PRK07868 47 PMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLA 122 (994)
T ss_pred CcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHH
Confidence 456666555433 236789999999999998 99865 7889777 99999994 66655432 24666
Q ss_pred HHHHHHHHHHHH---hCCcceEEEEEehhHHHHHHHHHhC-cccccceEEEcccCCCCccch---h-hh-hh--ccchhh
Q 022253 97 FQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMY-PDLVESMVVTCSVMGLTESVS---N-AA-LE--RIGYES 165 (300)
Q Consensus 97 ~~~~~~~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~-p~~v~~~vl~~~~~~~~~~~~---~-~~-~~--~~~~~~ 165 (300)
+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++|+++++..+..... . .. .. ......
T Consensus 123 ~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 202 (994)
T PRK07868 123 DHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADH 202 (994)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhh
Confidence 666666665554 3447899999999999999998755 558999999888765422110 0 00 00 000000
Q ss_pred hhhc--------------cCccc-HHHHHHHHHHhhccCCCChHHHHHHHHHHH-h--cchhhHHHHHHHhhhc------
Q 022253 166 WVDF--------------LLPKT-ADALKVQFDIACYKLPTLPAFVYKHILEAL-S--DHRKERIELLQALVIS------ 221 (300)
Q Consensus 166 ~~~~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~------ 221 (300)
+... +.+.. ......++..........+++....+.... + ........+...+...
T Consensus 203 ~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 203 VFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred hhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCc
Confidence 0000 00000 011111111111111122222223333222 1 1111222233333211
Q ss_pred -----ccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceE-EEEcCCCCcccc---cChHHHHHHHHHHHhhc
Q 022253 222 -----DKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATM-ESIEKAGHLVNL---ERPFVYNRQLKTILASL 292 (300)
Q Consensus 222 -----~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 292 (300)
.....+.++++|+|+|+|++|.++|++..+.+.+.++ +.++ ..++++||+.++ ..++++...|.+||+++
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0113578999999999999999999999999999997 8887 678999999777 47788999999999988
Q ss_pred ccccC
Q 022253 293 VHANG 297 (300)
Q Consensus 293 ~~~~~ 297 (300)
.....
T Consensus 362 ~~~~~ 366 (994)
T PRK07868 362 EGDGD 366 (994)
T ss_pred ccCCC
Confidence 75443
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.91 E-value=1.7e-23 Score=150.62 Aligned_cols=260 Identities=14% Similarity=0.144 Sum_probs=151.5
Q ss_pred ceeecCCCe-EEEEEccCC-CCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCC-CCCChHHH
Q 022253 24 RTIEIEPGT-ILNIWVPKK-TTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDR-PDRTASFQ 98 (300)
Q Consensus 24 ~~i~~~~g~-~l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~-~~~~~~~~ 98 (300)
+.+.++++. ++..+...+ .+.+|.++++||++.+.. .|..++..|... .+|+++|+||||++...+ .+.+.+.+
T Consensus 51 edv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~ 129 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETM 129 (343)
T ss_pred cccccCCCcceEEEEEecCCCCCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHH
Confidence 344453222 455333333 468999999999999999 999999999877 788999999999998766 55899999
Q ss_pred HHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHh--CcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcc
Q 022253 99 AECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (300)
Q Consensus 99 ~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (300)
++|+.++++.+ ...+++||||||||.+|...|.. -|. +.|+++++-.-......... ...+..........
T Consensus 130 ~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~---m~~fL~~rP~~F~S 205 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNS---MQHFLRNRPKSFKS 205 (343)
T ss_pred HHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHH---HHHHHhcCCccccc
Confidence 99999999988 24579999999999999887754 465 88999888653211000000 00000000000111
Q ss_pred cHHHHHHHHHHhhccCC-----CChHHHHHHHHHHHh---cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCccc
Q 022253 174 TADALKVQFDIACYKLP-----TLPAFVYKHILEALS---DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIF 245 (300)
Q Consensus 174 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~ 245 (300)
....+...++....+.. .++..+...--...+ .+......+...+. ......+-...+|-++|.+..|..-
T Consensus 206 i~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF-~gLS~~Fl~~p~~klLilAg~d~LD 284 (343)
T KOG2564|consen 206 IEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWF-KGLSDKFLGLPVPKLLILAGVDRLD 284 (343)
T ss_pred hhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHH-hhhhhHhhCCCccceeEEecccccC
Confidence 11111111111111110 011000000000000 00000011111111 1122233446677788877777653
Q ss_pred CHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhcc
Q 022253 246 DMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLV 293 (300)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 293 (300)
..-..- ++....++.+++.+||+.+.+.|..++..+..|+.++.
T Consensus 285 kdLtiG----QMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 285 KDLTIG----QMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred cceeee----eeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 211111 12246789999999999999999999999999998765
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=1.6e-22 Score=145.24 Aligned_cols=218 Identities=16% Similarity=0.154 Sum_probs=151.6
Q ss_pred CcccceeecCCCeEEE-EEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChH
Q 022253 20 GMTQRTIEIEPGTILN-IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTAS 96 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~-~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~ 96 (300)
..+...+.+..|-.+. .+...+....+++++.||...+.. ....+...|..+ ++++++|++|+|.|.+.+......
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccch
Confidence 3444455555554443 222222234689999999977766 555556667664 999999999999999877555444
Q ss_pred HHHHHHHHHHHHhC--CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCccc
Q 022253 97 FQAECMAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (300)
Q Consensus 97 ~~~~~~~~~i~~~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (300)
+.++.+.+.++.-. .++++|+|+|+|+..++.+|.+.| ++++|+.+|............
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~----------------- 173 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDT----------------- 173 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCc-----------------
Confidence 43444444444333 478999999999999999999998 999999998754211110000
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHH
Q 022253 175 ADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLK 254 (300)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 254 (300)
....+++. ......+..++||+|++||++|.+++......+.
T Consensus 174 ------------~~~~~~d~--------------------------f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Ly 215 (258)
T KOG1552|consen 174 ------------KTTYCFDA--------------------------FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALY 215 (258)
T ss_pred ------------ceEEeecc--------------------------ccccCcceeccCCEEEEecccCceecccccHHHH
Confidence 00000000 0013467789999999999999999999999999
Q ss_pred HHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhccccc
Q 022253 255 EQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHAN 296 (300)
Q Consensus 255 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 296 (300)
+..+...+-.++.|+||.-. +...++.+.+..|+......+
T Consensus 216 e~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 216 ERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred HhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHHHhcccC
Confidence 99985568888999999874 556669999999998776543
No 62
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.91 E-value=1.9e-23 Score=144.71 Aligned_cols=221 Identities=14% Similarity=0.149 Sum_probs=157.9
Q ss_pred ccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHH
Q 022253 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~ 99 (300)
++..+.++|.++++-+.-..+.+.|+++++||..++.. ..-+.++-+-.+ .+|+.+++||+|.|++.+......
T Consensus 55 e~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmG-hr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~--- 130 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMG-HRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLK--- 130 (300)
T ss_pred eEEEEEcCcceeEeeeeecccCCCceEEEEccCCCccc-chhhHHHHHHHHcCceEEEEEeeccccCCCCcccccee---
Confidence 44556677999998655445568999999999999988 777777666555 899999999999999876444333
Q ss_pred HHHHHHHHHh------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcc
Q 022253 100 ECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (300)
Q Consensus 100 ~~~~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (300)
-|-.++++.+ +..+++++|.|+||.+|+.+|++..+++.++|+-+.....+....+. +.+-
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~-------------v~p~ 197 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL-------------VFPF 197 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe-------------eccc
Confidence 3444455554 34589999999999999999999999999999998876532211100 0000
Q ss_pred cHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHH
Q 022253 174 TADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNL 253 (300)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 253 (300)
..+.+....++..| .....+.+.+.|.|+|.|.+|.++|+-..+.+
T Consensus 198 ----~~k~i~~lc~kn~~------------------------------~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~L 243 (300)
T KOG4391|consen 198 ----PMKYIPLLCYKNKW------------------------------LSYRKIGQCRMPFLFISGLKDELVPPVMMRQL 243 (300)
T ss_pred ----hhhHHHHHHHHhhh------------------------------cchhhhccccCceEEeecCccccCCcHHHHHH
Confidence 00011111111110 11123456788999999999999999999999
Q ss_pred HHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhhccc
Q 022253 254 KEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 254 ~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
.+..+ ...++.++|++.|.-.+ .-+-+.+.|.+||.+...
T Consensus 244 y~~c~S~~Krl~eFP~gtHNDT~-i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 244 YELCPSRTKRLAEFPDGTHNDTW-ICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred HHhCchhhhhheeCCCCccCceE-EeccHHHHHHHHHHHhcc
Confidence 99987 35789999999997654 235689999999987654
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.91 E-value=7.7e-22 Score=152.17 Aligned_cols=256 Identities=25% Similarity=0.272 Sum_probs=152.6
Q ss_pred CCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022253 30 PGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106 (300)
Q Consensus 30 ~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i 106 (300)
.+..+.|...+.. +++++++||++++.. .|......+... |+++++|+||||.|. .. .......++++..++
T Consensus 8 ~~~~~~~~~~~~~--~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~ 82 (282)
T COG0596 8 DGVRLAYREAGGG--GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALL 82 (282)
T ss_pred CCeEEEEeecCCC--CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHH
Confidence 4556666665542 669999999999998 888743333332 899999999999997 22 345555599999999
Q ss_pred HHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhh--hhccchhhhhhccCcccHHHHHHHHHH
Q 022253 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAA--LERIGYESWVDFLLPKTADALKVQFDI 184 (300)
Q Consensus 107 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (300)
+.++..+++++|||+||.+++.++.++|+++++++++++............ ...........................
T Consensus 83 ~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T COG0596 83 DALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAA 162 (282)
T ss_pred HHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhc
Confidence 999988999999999999999999999999999999998754111000000 000000000000000000000000000
Q ss_pred h-----hc------cCCCChHHHHHHHHHHHhcchh-hHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHH
Q 022253 185 A-----CY------KLPTLPAFVYKHILEALSDHRK-ERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARN 252 (300)
Q Consensus 185 ~-----~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 252 (300)
. .. ...................... ....................+++|+++++|++|.+.+......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~ 242 (282)
T COG0596 163 LGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARR 242 (282)
T ss_pred ccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHH
Confidence 0 00 0000000000000000000000 0000000000001224566788999999999997777666666
Q ss_pred HHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHh
Q 022253 253 LKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 253 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 290 (300)
+.+.++...++.+++++||+++.++|+.+++.+.+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 243 LAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 77777623899999999999999999999999988554
No 64
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.90 E-value=5e-22 Score=147.58 Aligned_cols=270 Identities=17% Similarity=0.186 Sum_probs=156.0
Q ss_pred CcccceeecCCCeEEE-EE-ccCCCCCCceEEEEcCCCCCchhhH-HHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCCh
Q 022253 20 GMTQRTIEIEPGTILN-IW-VPKKTTKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~-~~-~~~~~~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~ 95 (300)
...++.+.++||-.+- .| .......+|.||++||+.|+..+.| +.+++.+.++ |.|+++++|||+.+....+...-
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 3456778888775443 33 3344456789999999988877344 4556788877 99999999999988765443322
Q ss_pred HHHHHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcc--cccceEEEcccCCCCccchhhhhhccchhhhhhc
Q 022253 96 SFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGLTESVSNAALERIGYESWVDF 169 (300)
Q Consensus 96 ~~~~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (300)
.-..+|+..+++.+ ..+|+..+|.|+||.+...+..+..+ .+.+.+.++.+..... ....+-...........
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~-~~~~l~~~~s~~ly~r~ 206 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEA-CAYRLDSGFSLRLYSRY 206 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHH-HHHHhcCchhhhhhHHH
Confidence 33346666666555 45799999999999554444444322 3555555554433210 00000000000000000
Q ss_pred cCcccHHHHHHHHHHhhccCCCChHHHHHHHHH----------HHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEee
Q 022253 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILE----------ALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWG 239 (300)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (300)
+...........+... ....+... .+.++ ...............+........+++|.+|+|||++
T Consensus 207 l~~~L~~~~~~kl~~l---~~~~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 207 LLRNLKRNAARKLKEL---EPSLPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred HHHHHHHHHHHHHHhc---CcccCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEec
Confidence 0000001111111111 11111111 11111 1112222333344444445556789999999999999
Q ss_pred CCCcccCHHHHHHHHHHhCCCceEEEEcCCCCccccc----ChH-HHHHHHHHHHhhccc
Q 022253 240 ENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE----RPF-VYNRQLKTILASLVH 294 (300)
Q Consensus 240 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~~ 294 (300)
.+|++++++.........++++.+..-+.+||..++. +|. ...+.+.+|++....
T Consensus 283 ~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 283 KDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 9999999988777776455589999999999998886 343 566788888876543
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.90 E-value=3.1e-22 Score=139.57 Aligned_cols=142 Identities=25% Similarity=0.308 Sum_probs=112.9
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH-H-HhCCcceEEEEEehhH
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL-R-KLGVEKCTLVGVSYGG 123 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i-~-~~~~~~~~lvG~S~Gg 123 (300)
+||++||++++.. .|..+++.|+++ |.|+.+|+||+|.+.... ..+++.+.+ + ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-------AVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-------HHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchhH-------HHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 6899999999998 999999999999 999999999999873211 222222222 1 2366899999999999
Q ss_pred HHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHH
Q 022253 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEA 203 (300)
Q Consensus 124 ~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
.+++.++.+. .+++++|++++.+. .
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~---~--------------------------------------------------- 97 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD---S--------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG---C---------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCccc---h---------------------------------------------------
Confidence 9999999988 67999999998310 0
Q ss_pred HhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCc
Q 022253 204 LSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHL 272 (300)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 272 (300)
..+.+.+.|+++++|++|..++.+..+.+.+.++.+.++.+++|++|+
T Consensus 98 ---------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ---------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 012345569999999999999999999999999867999999999995
No 66
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.89 E-value=2.1e-20 Score=138.02 Aligned_cols=263 Identities=15% Similarity=0.140 Sum_probs=156.3
Q ss_pred ceeecCCCeEEEEEccCCC-CCCceEEEEcCCCCCchhhHHHH-----HHhhhcCceEEeecCCCCCCCC--CCCC--CC
Q 022253 24 RTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSSV--TDRP--DR 93 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~-~~~~~vv~lhG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~G~G~s~--~~~~--~~ 93 (300)
+.++++-| .+++...|.. +.+|++|-.|..|.+...+|..+ ++.+.++|.++-+|.||+..-. .+.. ..
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccccccc
Confidence 56777655 6776666663 35899999999999888447766 4667778999999999996543 2332 47
Q ss_pred ChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcc
Q 022253 94 TASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (300)
Q Consensus 94 ~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (300)
+.+++++++..++++++++.++-+|-..||++..++|..+|++|.|+||+++.+.......+...+..........+...
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~ 160 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSS 160 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccc
Confidence 89999999999999999999999999999999999999999999999999998765443332211111100000011111
Q ss_pred cHHH-HHHHHHHhhccCCCChHHHHHHHHHHHhc--chhhHHHHHHHhh-hcccCCCCCCCcceEEEEeeCCCcccCHHH
Q 022253 174 TADA-LKVQFDIACYKLPTLPAFVYKHILEALSD--HRKERIELLQALV-ISDKEFSIPHFSQKIHLLWGENDKIFDMQV 249 (300)
Q Consensus 174 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~ 249 (300)
..+. +...+....... ..+..+.+...+.. +......++..+. ..+.....+...||+|++.|+..+.. +.
T Consensus 161 ~~d~Ll~h~Fg~~~~~~---n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~ 235 (283)
T PF03096_consen 161 VKDYLLWHYFGKEEEEN---NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DD 235 (283)
T ss_dssp HHHHHHHHHS-HHHHHC---T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HH
T ss_pred hHHhhhhcccccccccc---cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hh
Confidence 1111 111111111111 22344444444432 2233344444433 23444566777899999999999874 56
Q ss_pred HHHHHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 250 ARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+..+.+++. ...++..++++|=.+..|+|+.+++.+.-|++..
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 677777775 4678999999999999999999999999999875
No 67
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.4e-20 Score=141.05 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=171.5
Q ss_pred CCeEEEEEccCCCC--CCceEEEEcCCCCCch--h--------hHHHHH---HhhhcC-ceEEeecCCCCC-CCCCCC--
Q 022253 30 PGTILNIWVPKKTT--KKHAVVLLHPFGFDGI--L--------TWQFQV---LALAKT-YEVYVPDFLFFG-SSVTDR-- 90 (300)
Q Consensus 30 ~g~~l~~~~~~~~~--~~~~vv~lhG~~~~~~--~--------~~~~~~---~~l~~~-~~v~~~d~~G~G-~s~~~~-- 90 (300)
++..+.|..+|.-. ...+||++||+.++.. . .|..++ +.+.-. |.||++|..|.+ .|+.|.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 55678898888633 3678999999998655 1 355544 345555 999999999865 444332
Q ss_pred -----------CCCChHHHHHHHHHHHHHhCCcceE-EEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhh--
Q 022253 91 -----------PDRTASFQAECMAKGLRKLGVEKCT-LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNA-- 156 (300)
Q Consensus 91 -----------~~~~~~~~~~~~~~~i~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~-- 156 (300)
+..++.++++.-..+++++|++++. +||-||||+.++.++..+|++|++++.+++...........
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 2256778888888899999999987 89999999999999999999999999999876543321110
Q ss_pred -----hhhccch--hhhhhccCcccHHHHHHHHHHhhccCC----------------C--ChHHHHHHHHHHHh------
Q 022253 157 -----ALERIGY--ESWVDFLLPKTADALKVQFDIACYKLP----------------T--LPAFVYKHILEALS------ 205 (300)
Q Consensus 157 -----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--~~~~~~~~~~~~~~------ 205 (300)
+.....+ ........+...-.+.+.+....++.. . ......+.++....
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~r 273 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVAR 273 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhc
Confidence 0000000 000000111112222222222222210 0 01223333433332
Q ss_pred cchhhHHHHHHHhhhcccCCC-------CCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEc-CCCCcccccC
Q 022253 206 DHRKERIELLQALVISDKEFS-------IPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIE-KAGHLVNLER 277 (300)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~-------~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~ 277 (300)
.+......+.+.+...+.... +.++++|++++.-+.|..+|++..+.+.+.++....+.+++ ..||..++..
T Consensus 274 fDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e 353 (368)
T COG2021 274 FDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVE 353 (368)
T ss_pred cCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcc
Confidence 223334445555655665544 78899999999999999999999999999998333365654 5699999988
Q ss_pred hHHHHHHHHHHHhh
Q 022253 278 PFVYNRQLKTILAS 291 (300)
Q Consensus 278 ~~~~~~~i~~fl~~ 291 (300)
.+.+...|..||+.
T Consensus 354 ~~~~~~~i~~fL~~ 367 (368)
T COG2021 354 SEAVGPLIRKFLAL 367 (368)
T ss_pred hhhhhHHHHHHhhc
Confidence 89999999999975
No 68
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=1e-20 Score=135.15 Aligned_cols=228 Identities=14% Similarity=0.093 Sum_probs=156.7
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH-HhCCcceEEEEEeh
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-KLGVEKCTLVGVSY 121 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~lvG~S~ 121 (300)
..+..++++|=.|+++. .|+.+...|.....++++++||+|.--......+++.+++.+...+. ....+++.++||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 35678999999999999 99999999988899999999999988777777899999999998888 45557999999999
Q ss_pred hHHHHHHHHHhCcc---cccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHH
Q 022253 122 GGMVGFKMAEMYPD---LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYK 198 (300)
Q Consensus 122 Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (300)
||++|.++|.+... .+.++.+.+...+.... ..... .......+..+..........+.+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i~-----------~~~D~~~l~~l~~lgG~p~e~led~--- 147 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQIH-----------HLDDADFLADLVDLGGTPPELLEDP--- 147 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCcc-----------CCCHHHHHHHHHHhCCCChHHhcCH---
Confidence 99999999986532 25566666554431110 00000 0111122222222222111111111
Q ss_pred HHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccCh
Q 022253 199 HILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 278 (300)
+++..+....+......+.+. . ..-..+.||+.++.|++|..++.+....+.+......++..++ +||+...++.
T Consensus 148 El~~l~LPilRAD~~~~e~Y~---~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~ 222 (244)
T COG3208 148 ELMALFLPILRADFRALESYR---Y-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQR 222 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccc---c-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhH
Confidence 111111111222222222221 1 1225689999999999999999999999999888789999999 5999999999
Q ss_pred HHHHHHHHHHHhhc
Q 022253 279 FVYNRQLKTILASL 292 (300)
Q Consensus 279 ~~~~~~i~~fl~~~ 292 (300)
+++...|.+.+...
T Consensus 223 ~~v~~~i~~~l~~~ 236 (244)
T COG3208 223 EEVLARLEQHLAHH 236 (244)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999998643
No 69
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=145.06 Aligned_cols=270 Identities=15% Similarity=0.093 Sum_probs=156.7
Q ss_pred cCcccceeecCCCeEEEE--EccCCC------CCCceEEEEcCCCCCchhhH-HHHHHhhhcC-ceEEeecCCCCCCCCC
Q 022253 19 VGMTQRTIEIEPGTILNI--WVPKKT------TKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPDFLFFGSSVT 88 (300)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~--~~~~~~------~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~ 88 (300)
...+++.++++||-.+.+ ...... ...|.||++||+.+++.+.| +.++..+.+. |+|+.++.||+|.|.-
T Consensus 91 ~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 91 VEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred CcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 356778899999987765 222222 35699999999988776344 4455555555 9999999999999987
Q ss_pred CCCCCChHHHHHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcc---cccceEEEcccCCCCccchhhhhhcc
Q 022253 89 DRPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTESVSNAALERI 161 (300)
Q Consensus 89 ~~~~~~~~~~~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~~~~~~~~~~ 161 (300)
..+..-...+.+|+.++++++ ...|+..+|.||||.+.+.|..+..+ .+.++.+++|+-.. .........
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~---~~~~~~~~~ 247 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL---AASRSIETP 247 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh---hhhhHHhcc
Confidence 665533334466777766665 44589999999999999999987544 35555666655422 001111111
Q ss_pred chhhhhhccCcccHHHHHHHHHH-hhccC----CCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEE
Q 022253 162 GYESWVDFLLPKTADALKVQFDI-ACYKL----PTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHL 236 (300)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 236 (300)
....+.................. ...+. ........+++-+...............+........+.+|++|+|+
T Consensus 248 ~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ 327 (409)
T KOG1838|consen 248 LYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLC 327 (409)
T ss_pred cchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEE
Confidence 11111111111111100000000 00000 00111222333333222222223333334444555788999999999
Q ss_pred EeeCCCcccCHHHH-HHHHHHhCCCceEEEEcCCCCcccccC----hHHHHHH-HHHHHhhc
Q 022253 237 LWGENDKIFDMQVA-RNLKEQVGQNATMESIEKAGHLVNLER----PFVYNRQ-LKTILASL 292 (300)
Q Consensus 237 i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~~~ 292 (300)
|++.+|+++|.+.. .......+ ++-+++-..+||..++|. +....+. +.+|+...
T Consensus 328 ina~DDPv~p~~~ip~~~~~~np-~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 328 INAADDPVVPEEAIPIDDIKSNP-NVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred EecCCCCCCCcccCCHHHHhcCC-cEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 99999999998643 33333344 788888888999988875 2333333 67777654
No 70
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.87 E-value=4.7e-19 Score=129.20 Aligned_cols=231 Identities=14% Similarity=0.134 Sum_probs=145.3
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHhCCc-ceEEEEEeh
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKLGVE-KCTLVGVSY 121 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~lvG~S~ 121 (300)
..+||-+||.+++.. .|..+.+.|.+. .++|.+++||+|.++.+. ..++-.+....+.++++.++++ +++++|||.
T Consensus 35 ~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSr 113 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSR 113 (297)
T ss_pred ceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEecc
Confidence 348999999999999 999999999998 999999999999998766 4588888999999999999876 688899999
Q ss_pred hHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhh-hhhccCcccHHHHH-HHHHHhhccCCCChHHHHHH
Q 022253 122 GGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYES-WVDFLLPKTADALK-VQFDIACYKLPTLPAFVYKH 199 (300)
Q Consensus 122 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 199 (300)
||-.|+.+|..+| ..++++++|+............ ++.... +...+.......+. ..+.....+-. -.++....
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~-r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~-~GeeA~na 189 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLS-RMETINYLYDLLPRFIINAIMYFYYRMIGFKVS-DGEEAINA 189 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCccccccCcCHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeec-ChHHHHHH
Confidence 9999999999996 6799999998754322211111 111111 11101000011110 11111111101 01111111
Q ss_pred HHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC---------------------
Q 022253 200 ILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG--------------------- 258 (300)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--------------------- 258 (300)
................ ..+.+-++|+++++|.+|.++..+...++...+.
T Consensus 190 ~r~m~~~df~~q~~~I---------~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~ 260 (297)
T PF06342_consen 190 MRSMQNCDFEEQKEYI---------DKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILK 260 (297)
T ss_pred HHHHHhcCHHHHHHHH---------HHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHH
Confidence 1111111111111111 2344556899999999999988776666654432
Q ss_pred ---C--CceEEEEcCCCCcccccChHHHHHHHHHHH
Q 022253 259 ---Q--NATMESIEKAGHLVNLERPFVYNRQLKTIL 289 (300)
Q Consensus 259 ---~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 289 (300)
. ....+.+.+.||+.+-.+++-+++.+...|
T Consensus 261 ~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 261 SFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred HHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 0 122445666788888778887877776654
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.87 E-value=8.4e-21 Score=142.53 Aligned_cols=124 Identities=20% Similarity=0.219 Sum_probs=96.4
Q ss_pred eeecCCCeEEEEEc-cCCCCCCceEEEEcCCCCCch---hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHH
Q 022253 25 TIEIEPGTILNIWV-PKKTTKKHAVVLLHPFGFDGI---LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (300)
Q Consensus 25 ~i~~~~g~~l~~~~-~~~~~~~~~vv~lhG~~~~~~---~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 99 (300)
++..+.|....++. +...+.+++|||+||+++... ..|..+++.|++. |.|+++|+||||.|.......+++.++
T Consensus 4 ~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~ 83 (266)
T TIGR03101 4 FLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWK 83 (266)
T ss_pred EecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHH
Confidence 44555666555333 333234678999999986432 1667778899877 999999999999998665556788888
Q ss_pred HHHHHHHHH---hCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 100 ECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 100 ~~~~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+|+..+++. .+.++++++||||||.+++.+|.++|++++++|+++|...
T Consensus 84 ~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 84 EDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 888776554 4567999999999999999999999999999999998754
No 72
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.86 E-value=2.5e-18 Score=125.20 Aligned_cols=265 Identities=15% Similarity=0.131 Sum_probs=178.1
Q ss_pred cccceeecCCCeEEEEEccCCC-CCCceEEEEcCCCCCchhhHHHH-----HHhhhcCceEEeecCCCCCCC--CCCCC-
Q 022253 21 MTQRTIEIEPGTILNIWVPKKT-TKKHAVVLLHPFGFDGILTWQFQ-----VLALAKTYEVYVPDFLFFGSS--VTDRP- 91 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-~~~~~vv~lhG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~G~G~s--~~~~~- 91 (300)
.+++.|++..| .+++...|.. +++|++|-.|.++-+...+|..+ +..+..+|.|+-+|.|||-.. ..+..
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCC
Confidence 57888888765 5666666652 35888999999999887447765 355666799999999998543 33333
Q ss_pred -CCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhcc
Q 022253 92 -DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL 170 (300)
Q Consensus 92 -~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (300)
..+.++++++|..++++++.+.++-+|-..||++..++|..||++|.++||+++.+.......+...+.. ...+...
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~-s~~l~~~- 178 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVS-SNLLYYY- 178 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHH-HHHHHhh-
Confidence 4789999999999999999999999999999999999999999999999999998765443332211111 0000000
Q ss_pred CcccHHHHHHHHHH-hhccC-CCChHHHHHHHHHHHhc--chhhHHHHHHHhhh-cccCCCCC----CCcceEEEEeeCC
Q 022253 171 LPKTADALKVQFDI-ACYKL-PTLPAFVYKHILEALSD--HRKERIELLQALVI-SDKEFSIP----HFSQKIHLLWGEN 241 (300)
Q Consensus 171 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~----~i~~P~l~i~g~~ 241 (300)
........++-. .+.+. ..-..++.+++.+.+.. +......++..+.. .+.....+ .++||+|++.|++
T Consensus 179 --Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 179 --GMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred --chhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 001111222211 11111 11234555555555442 22333344444332 22222222 4669999999999
Q ss_pred CcccCHHHHHHHHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 242 DKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 242 D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.+.+ +...++..++. .+.++..+.++|-.+..++|..+++.+.-|++..
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 8875 35556666654 4688999999999998899999999999999865
No 73
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=8.7e-20 Score=136.13 Aligned_cols=172 Identities=17% Similarity=0.220 Sum_probs=113.9
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCC-----------CCCCCh---HHHHHHHHHHHH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD-----------RPDRTA---SFQAECMAKGLR 107 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-----------~~~~~~---~~~~~~~~~~i~ 107 (300)
+..+.||++||++++.. .|..+++.|.+. +.+..++.+|...+... ...... ....+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 46789999999999999 999999999876 45555555554322110 000111 122222333333
Q ss_pred ----HhCC--cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHH
Q 022253 108 ----KLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQ 181 (300)
Q Consensus 108 ----~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (300)
..+. ++++++|+|+||.+++.++.++|+.+.+++.+++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------------- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------------- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc-------------------------------
Confidence 3333 579999999999999999999998777777765421100
Q ss_pred HHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC---
Q 022253 182 FDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG--- 258 (300)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 258 (300)
+ .....++|+++++|++|+++|.+.++.+.+.+.
T Consensus 142 -----------~--------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g 178 (232)
T PRK11460 142 -----------P--------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLG 178 (232)
T ss_pred -----------c--------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCC
Confidence 0 001236799999999999999999988888774
Q ss_pred CCceEEEEcCCCCcccccChHHHHHHHHHHH
Q 022253 259 QNATMESIEKAGHLVNLERPFVYNRQLKTIL 289 (300)
Q Consensus 259 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 289 (300)
.+++++.++++||.+..+.-+.+.+.+.+++
T Consensus 179 ~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 179 GDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 2568888999999985443333444443333
No 74
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=5e-20 Score=155.96 Aligned_cols=235 Identities=16% Similarity=0.160 Sum_probs=151.3
Q ss_pred ccCcccceeecCCCeEEEEEccCCCCC-----CceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCC--
Q 022253 18 LVGMTQRTIEIEPGTILNIWVPKKTTK-----KHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVT-- 88 (300)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~~~~-----~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~-- 88 (300)
....+..++...||.+++.+...+.+. -|+||++||.+.... ..|....+.|+.. |.|+.+++||.+.-..
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHH
Confidence 334566667777999998765543211 289999999986555 1466677888888 9999999997644211
Q ss_pred ------CCCCCChHHHHHHHHHHHHHhC---CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhh
Q 022253 89 ------DRPDRTASFQAECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (300)
Q Consensus 89 ------~~~~~~~~~~~~~~~~~i~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 159 (300)
.......+++.+.+. +++..+ .+++.+.|||+||++++..+...| .+++.+...+..............
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~ 519 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEG 519 (620)
T ss_pred HHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchh
Confidence 112234555555555 444442 348999999999999999999888 677777766654321100000000
Q ss_pred ccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEee
Q 022253 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWG 239 (300)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (300)
+............+ -...+....+.....++++|+|+|||
T Consensus 520 ------------------~~~~~~~~~~~~~~----------------------~~~~~~~~sp~~~~~~i~~P~LliHG 559 (620)
T COG1506 520 ------------------LRFDPEENGGGPPE----------------------DREKYEDRSPIFYADNIKTPLLLIHG 559 (620)
T ss_pred ------------------hcCCHHHhCCCccc----------------------ChHHHHhcChhhhhcccCCCEEEEee
Confidence 00000000000000 00111112233456789999999999
Q ss_pred CCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCcccc-cChHHHHHHHHHHHhhccc
Q 022253 240 ENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 240 ~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 294 (300)
++|..|+.+++..+.+.+. ..++++++|+.+|.+.. ++...+.+.+.+|++++..
T Consensus 560 ~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 560 EEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred cCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999888775 35799999999999876 5566788888888887653
No 75
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.85 E-value=1e-19 Score=126.20 Aligned_cols=216 Identities=18% Similarity=0.131 Sum_probs=139.6
Q ss_pred CCCceEEEEcCCCCCchh-hHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCc-c--eEEE
Q 022253 43 TKKHAVVLLHPFGFDGIL-TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-K--CTLV 117 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~-~--~~lv 117 (300)
++...+|++||+-++... ....++..|.+. +.++.+|++|.|+|+..-........++|+..+++.+... + .+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 367899999999988762 444567888888 9999999999999997665555556679999999998433 2 3588
Q ss_pred EEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhc----cCCCCh
Q 022253 118 GVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACY----KLPTLP 193 (300)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 193 (300)
|||-||.+++.+|.++++ +.-+|-+++-.......... +.+.. +.+.....+. ++....
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eR-------------lg~~~---l~~ike~Gfid~~~rkG~y~ 173 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINER-------------LGEDY---LERIKEQGFIDVGPRKGKYG 173 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcccccchhcchhhh-------------hcccH---HHHHHhCCceecCcccCCcC
Confidence 999999999999999987 77777776654422211100 00000 0000000000 000000
Q ss_pred HHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCC--CCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCC
Q 022253 194 AFVYKHILEALSDHRKERIELLQALVISDKEFSI--PHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 271 (300)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 271 (300)
.....+- +...+. .+..... -..+||||-+||..|.+||.+.+.++++.++ +.++.++||++|
T Consensus 174 ~rvt~eS-------------lmdrLn-td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-nH~L~iIEgADH 238 (269)
T KOG4667|consen 174 YRVTEES-------------LMDRLN-TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-NHKLEIIEGADH 238 (269)
T ss_pred ceecHHH-------------HHHHHh-chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-CCceEEecCCCc
Confidence 0000000 000000 0111111 2357999999999999999999999999999 899999999999
Q ss_pred cccccChHHHHHHHHHHHhh
Q 022253 272 LVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 272 ~~~~~~~~~~~~~i~~fl~~ 291 (300)
.... +.++.......|...
T Consensus 239 nyt~-~q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 239 NYTG-HQSQLVSLGLEFIKT 257 (269)
T ss_pred Cccc-hhhhHhhhcceeEEe
Confidence 8754 334455555555443
No 76
>PLN00021 chlorophyllase
Probab=99.84 E-value=3.5e-19 Score=137.54 Aligned_cols=186 Identities=15% Similarity=0.131 Sum_probs=121.2
Q ss_pred CeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-
Q 022253 31 GTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK- 108 (300)
Q Consensus 31 g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~- 108 (300)
+..+..+.+...+..|+|||+||++.+.. .|..+++.|+++ |.|+++|++|++.+.......+.....+.+.+.++.
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~ 116 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAV 116 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhh
Confidence 45556666655567799999999999988 999999999988 999999999875332111101111222222222222
Q ss_pred ------hCCcceEEEEEehhHHHHHHHHHhCcc-----cccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHH
Q 022253 109 ------LGVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADA 177 (300)
Q Consensus 109 ------~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (300)
.+.++++++|||+||.+++.+|..+++ ++.++|+++|..........
T Consensus 117 l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~---------------------- 174 (313)
T PLN00021 117 LPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT---------------------- 174 (313)
T ss_pred cccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC----------------------
Confidence 234689999999999999999998874 57899999886542110000
Q ss_pred HHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCc-----c----cCHH
Q 022253 178 LKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDK-----I----FDMQ 248 (300)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~-----~----~~~~ 248 (300)
+... . ......-++.+|+++|.+..|. . .|..
T Consensus 175 ---------------~p~i------------------l------~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~ 215 (313)
T PLN00021 175 ---------------PPPV------------------L------TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDG 215 (313)
T ss_pred ---------------CCcc------------------c------ccCcccccCCCCeEEEecCCCcccccccccccCCCC
Confidence 0000 0 0001122378999999998763 2 2233
Q ss_pred -HHHHHHHHhCCCceEEEEcCCCCcccccCh
Q 022253 249 -VARNLKEQVGQNATMESIEKAGHLVNLERP 278 (300)
Q Consensus 249 -~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 278 (300)
....+.+..++.+.+.+++++||+-+++..
T Consensus 216 ~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 216 VNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 336677777667889999999999876543
No 77
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=5.3e-19 Score=131.15 Aligned_cols=193 Identities=17% Similarity=0.200 Sum_probs=121.1
Q ss_pred hHHHHHHhhhcC-ceEEeecCCCCCCCCCCC----CCCChHHHHHHHHHHHHHh------CCcceEEEEEehhHHHHHHH
Q 022253 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDR----PDRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKM 129 (300)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~~~~~i~~~------~~~~~~lvG~S~Gg~~a~~~ 129 (300)
.|....+.|+++ |.|+.+|+||.+...... ....-....+|+.++++.+ +.+++.++|+|+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 345567788777 999999999987432211 1122233466666666665 34689999999999999999
Q ss_pred HHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchh
Q 022253 130 AEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRK 209 (300)
Q Consensus 130 a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (300)
+.++|+++++++..++............. +.... .......+..
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~---------------- 125 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI-------------------YTKAE-YLEYGDPWDN---------------- 125 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC-------------------HHHGH-HHHHSSTTTS----------------
T ss_pred hcccceeeeeeeccceecchhcccccccc-------------------ccccc-ccccCccchh----------------
Confidence 99999999999999987654322211000 00000 0000000000
Q ss_pred hHHHHHHHhhhcccCCCCCC--CcceEEEEeeCCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCcccc-cChHHHHH
Q 022253 210 ERIELLQALVISDKEFSIPH--FSQKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNR 283 (300)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~ 283 (300)
...+..+.. ...+.+ +++|+|+++|++|..||.+.+..+.+.+. ..++++++|++||.+.. +...+..+
T Consensus 126 --~~~~~~~s~---~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~ 200 (213)
T PF00326_consen 126 --PEFYRELSP---ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYE 200 (213)
T ss_dssp --HHHHHHHHH---GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHH
T ss_pred --hhhhhhhcc---ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHH
Confidence 011111111 112223 78999999999999999999888887775 35899999999996553 45567889
Q ss_pred HHHHHHhhccc
Q 022253 284 QLKTILASLVH 294 (300)
Q Consensus 284 ~i~~fl~~~~~ 294 (300)
.+.+|+++...
T Consensus 201 ~~~~f~~~~l~ 211 (213)
T PF00326_consen 201 RILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999987653
No 78
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=3.5e-18 Score=131.28 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=77.4
Q ss_pred CCCceEEEEcCCCCCchhhHHHH--HHhhhc-C-ceEEeecC--CCCCCCCCCC--------------------CCCCh-
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQ--VLALAK-T-YEVYVPDF--LFFGSSVTDR--------------------PDRTA- 95 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~--~~~l~~-~-~~v~~~d~--~G~G~s~~~~--------------------~~~~~- 95 (300)
.+.|+|+++||++++.. .|... +..++. . +.|+++|. +|+|.+.... ..+..
T Consensus 40 ~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~ 118 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMY 118 (275)
T ss_pred CCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHH
Confidence 35789999999999888 77542 344544 3 99999998 5555332110 01122
Q ss_pred HHHHHHHHHHHHH---hCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 96 SFQAECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 96 ~~~~~~~~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
...++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++...
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 3346788888877 3556899999999999999999999999999999988754
No 79
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=7.1e-18 Score=129.79 Aligned_cols=197 Identities=15% Similarity=0.148 Sum_probs=116.2
Q ss_pred eEEEEEccCC--CCCCceEEEEcCCCCCchhhHHH---HHHhhhcC-ceEEeecCCCCCC-----CCC------------
Q 022253 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQF---QVLALAKT-YEVYVPDFLFFGS-----SVT------------ 88 (300)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~lhG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~G~G~-----s~~------------ 88 (300)
..+.++.|.. ..+.|+|+|+||++++.. .|.. +.+.+... +.|+.+|..++|. +..
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 3444444432 235789999999998877 6644 33555555 9999999887661 110
Q ss_pred -CCC--------CCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhh
Q 022253 89 -DRP--------DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (300)
Q Consensus 89 -~~~--------~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 159 (300)
... .+..+++.+.+....+.++.++++++|||+||..|+.++.++|+++++++.+++..........
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~---- 186 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWG---- 186 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchh----
Confidence 000 0112222333344444457788999999999999999999999999999999987542210000
Q ss_pred ccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEee
Q 022253 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWG 239 (300)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (300)
. ..+... . .. +.... ...........+...++|+++++|
T Consensus 187 ---~------------~~~~~~----~-g~---~~~~~------------------~~~d~~~~~~~~~~~~~pvli~~G 225 (283)
T PLN02442 187 ---Q------------KAFTNY----L-GS---DKADW------------------EEYDATELVSKFNDVSATILIDQG 225 (283)
T ss_pred ---h------------HHHHHH----c-CC---ChhhH------------------HHcChhhhhhhccccCCCEEEEEC
Confidence 0 000000 0 00 00000 000000111223456889999999
Q ss_pred CCCcccCHH-HHHHHHHH---hCCCceEEEEcCCCCccc
Q 022253 240 ENDKIFDMQ-VARNLKEQ---VGQNATMESIEKAGHLVN 274 (300)
Q Consensus 240 ~~D~~~~~~-~~~~~~~~---~~~~~~~~~~~~~gH~~~ 274 (300)
++|.+++.. ..+.+.+. ...++++.++++.+|..+
T Consensus 226 ~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 226 EADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 999998852 23333333 334689999999999765
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.80 E-value=2.2e-17 Score=128.63 Aligned_cols=233 Identities=13% Similarity=0.070 Sum_probs=129.5
Q ss_pred cccceeecCCCeEEEE--EccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHH
Q 022253 21 MTQRTIEIEPGTILNI--WVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASF 97 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~--~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~ 97 (300)
+++..|.. .|.+|.. ..+...++.|+||++.|+-+...+.|..+.+.|.+. +.++++|.||.|.|.......+.+.
T Consensus 165 i~~v~iP~-eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~ 243 (411)
T PF06500_consen 165 IEEVEIPF-EGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSR 243 (411)
T ss_dssp EEEEEEEE-TTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCH
T ss_pred cEEEEEee-CCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHH
Confidence 34444555 4566653 344443445667777777766662344455667766 9999999999999865443334445
Q ss_pred HHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCccc
Q 022253 98 QAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKT 174 (300)
Q Consensus 98 ~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (300)
+...+.+.+... +..+|.++|.|+||++|.++|..+++|++++|..+++...--... .....
T Consensus 244 l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~-~~~~~-------------- 308 (411)
T PF06500_consen 244 LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDP-EWQQR-------------- 308 (411)
T ss_dssp HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-H-HHHTT--------------
T ss_pred HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccH-HHHhc--------------
Confidence 556666666555 345899999999999999999989899999999999864221110 00000
Q ss_pred HHHHHHHHHHhhccCCCChHHHHHHHHHHHh-cchhhHHHHHHHhhhccc--CCCC--CCCcceEEEEeeCCCcccCHHH
Q 022253 175 ADALKVQFDIACYKLPTLPAFVYKHILEALS-DHRKERIELLQALVISDK--EFSI--PHFSQKIHLLWGENDKIFDMQV 249 (300)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~--~~i~~P~l~i~g~~D~~~~~~~ 249 (300)
.|.. ..+.+...+ ........+...+..... ...+ .+.++|+|.+.|++|+++|.+.
T Consensus 309 -----------------~P~m-y~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD 370 (411)
T PF06500_consen 309 -----------------VPDM-YLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIED 370 (411)
T ss_dssp -----------------S-HH-HHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHH
T ss_pred -----------------CCHH-HHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHH
Confidence 0111 111111111 111111222222222222 1234 6788999999999999999999
Q ss_pred HHHHHHHhCCCceEEEEcCCC-CcccccChHHHHHHHHHHHhhc
Q 022253 250 ARNLKEQVGQNATMESIEKAG-HLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.+.++..-. +.+...++... |.. -+.-...+.+||++.
T Consensus 371 ~~lia~~s~-~gk~~~~~~~~~~~g----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 371 SRLIAESST-DGKALRIPSKPLHMG----YPQALDEIYKWLEDK 409 (411)
T ss_dssp HHHHHHTBT-T-EEEEE-SSSHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-CCceeecCCCccccc----hHHHHHHHHHHHHHh
Confidence 999888765 77888887544 322 235677788888764
No 81
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.80 E-value=1.7e-17 Score=128.31 Aligned_cols=227 Identities=15% Similarity=0.055 Sum_probs=130.1
Q ss_pred CCCeEEEE--EccC-CCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCC-CCCCC-------C------
Q 022253 29 EPGTILNI--WVPK-KTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGS-SVTDR-------P------ 91 (300)
Q Consensus 29 ~~g~~l~~--~~~~-~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~-s~~~~-------~------ 91 (300)
.+|..++- ..+. ..++-|.||.+||.++... .|...+..-...|.|+.+|.||+|. +.... .
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g 142 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRG 142 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTT
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcC
Confidence 37888873 4454 3456689999999999887 7766655444449999999999993 21110 0
Q ss_pred CCC------hHHHHHHHHHHHHHh------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhh
Q 022253 92 DRT------ASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (300)
Q Consensus 92 ~~~------~~~~~~~~~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 159 (300)
..+ +..+..|....++.+ +.+++.+.|.|+||.+++.+|+..+ +|++++...|..............
T Consensus 143 ~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~~~~ 221 (320)
T PF05448_consen 143 IDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALELRAD 221 (320)
T ss_dssp TTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHHT--
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhcCCc
Confidence 011 222345555555554 2358999999999999999999886 599999888865421110000000
Q ss_pred ccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEee
Q 022253 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWG 239 (300)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (300)
. .+-..+..+++..-.........+..+...+......+|+||+++-.|
T Consensus 222 ~-------------------------------~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~g 270 (320)
T PF05448_consen 222 E-------------------------------GPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVG 270 (320)
T ss_dssp S-------------------------------TTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEE
T ss_pred c-------------------------------ccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEe
Confidence 0 011112222221111222223333333333444456789999999999
Q ss_pred CCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHH-HHHHHHHHhhc
Q 022253 240 ENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVY-NRQLKTILASL 292 (300)
Q Consensus 240 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 292 (300)
-.|.++|++..-..++.++...++.+++..||.. +.+. .+...+||.++
T Consensus 271 l~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 271 LQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp TT-SSS-HHHHHHHHCC--SSEEEEEETT--SST----THHHHHHHHHHHHHH-
T ss_pred cCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc----hhhHHHHHHHHHHhcC
Confidence 9999999999999999998789999999999954 3334 77778888753
No 82
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.79 E-value=1.4e-16 Score=125.39 Aligned_cols=245 Identities=13% Similarity=0.056 Sum_probs=152.9
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
.|+||++..+.+.....-+.+++.|-..+.|+..|+..-+..+......+++++++.+.++++.+|.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999998766633456677777789999999987775555557789999999999999999877 99999999999
Q ss_pred HHHHHHHhC-----cccccceEEEcccCCCCcc-ch-hhhhhccchhhhhhc---------------cCc----------
Q 022253 125 VGFKMAEMY-----PDLVESMVVTCSVMGLTES-VS-NAALERIGYESWVDF---------------LLP---------- 172 (300)
Q Consensus 125 ~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~-~~-~~~~~~~~~~~~~~~---------------~~~---------- 172 (300)
.++.+++.. |++++++++++++..+... .. ...........+... ..+
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 977766654 6679999999998876542 11 111110000000000 000
Q ss_pred ---c-cHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcc----hhhHHHHHHHhhh-----------cccCCCCCCCc-c
Q 022253 173 ---K-TADALKVQFDIACYKLPTLPAFVYKHILEALSDH----RKERIELLQALVI-----------SDKEFSIPHFS-Q 232 (300)
Q Consensus 173 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~~~~~~~~i~-~ 232 (300)
. .......++........ ........+.+.+... .....+....+.. ......+.+|+ +
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~-~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDG-QEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCc-chHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 0 00111111211110110 1111111122222211 1112222222221 11225677899 9
Q ss_pred eEEEEeeCCCcccCHHHHHHHHHHh---CC-CceEEEEcCCCCcccc---cChHHHHHHHHHHHhh
Q 022253 233 KIHLLWGENDKIFDMQVARNLKEQV---GQ-NATMESIEKAGHLVNL---ERPFVYNRQLKTILAS 291 (300)
Q Consensus 233 P~l~i~g~~D~~~~~~~~~~~~~~~---~~-~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 291 (300)
|++.+.|++|.++++.++..+.+.. ++ ..+....+++||+..+ .-++++...|.+||.+
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999999998874 42 4456777789999766 3557899999999975
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.78 E-value=3.1e-17 Score=121.29 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=72.9
Q ss_pred CCCceEEEEcCCCCCchhhHH---HHHHhhhcC-ceEEeecCCCCCCCCCCCCCC------ChHHHHHHHHHHHHHh---
Q 022253 43 TKKHAVVLLHPFGFDGILTWQ---FQVLALAKT-YEVYVPDFLFFGSSVTDRPDR------TASFQAECMAKGLRKL--- 109 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~------~~~~~~~~~~~~i~~~--- 109 (300)
+..|+||++||.+++.. .+. .+.+.+.+. |.|+++|++|++.+......+ .......++..+++.+
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 46789999999998877 665 234444444 999999999987543211000 0011233333444333
Q ss_pred -C--CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 110 -G--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 110 -~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+ .++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 2 35899999999999999999999999999988887654
No 84
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.78 E-value=6.6e-17 Score=121.56 Aligned_cols=220 Identities=17% Similarity=0.182 Sum_probs=135.5
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCc-ceEEEEEehhH
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE-KCTLVGVSYGG 123 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~lvG~S~Gg 123 (300)
++|+|+|+.+++.. .|..+++.|... +.|+.++.+|.+.. .....+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999 999999999998 99999999999822 234478999999988888877655 99999999999
Q ss_pred HHHHHHHHhC---cccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHH
Q 022253 124 MVGFKMAEMY---PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (300)
Q Consensus 124 ~~a~~~a~~~---p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (300)
.+|+.+|.+- ...+..++++++.++........ ....... ....+....... .........
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~--~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~ 141 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRS--REPSDEQ------------FIEELRRIGGTP--DASLEDEEL 141 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHH--HHCHHHH------------HHHHHHHHCHHH--HHHCHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhh--hhhhHHH------------HHHHHHHhcCCc--hhhhcCHHH
Confidence 9999999754 34588999999765532111110 0000000 000010000000 000000011
Q ss_pred HHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHH---HHHHHHHHhCCCceEEEEcCCCCccccc-
Q 022253 201 LEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQ---VARNLKEQVGQNATMESIEKAGHLVNLE- 276 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~~- 276 (300)
............ ..+.... ......-.+|.++.....|+..... ....+.+......+++.++ ++|+.++.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~ 216 (229)
T PF00975_consen 142 LARLLRALRDDF---QALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKP 216 (229)
T ss_dssp HHHHHHHHHHHH---HHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHST
T ss_pred HHHHHHHHHHHH---HHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecch
Confidence 111111111111 1111110 1111111467888999999887766 3334666666567888888 59998886
Q ss_pred ChHHHHHHHHHHH
Q 022253 277 RPFVYNRQLKTIL 289 (300)
Q Consensus 277 ~~~~~~~~i~~fl 289 (300)
+..++++.|.++|
T Consensus 217 ~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 217 HVAEIAEKIAEWL 229 (229)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHhccC
Confidence 7788888888876
No 85
>PRK10162 acetyl esterase; Provisional
Probab=99.77 E-value=1.6e-16 Score=124.47 Aligned_cols=232 Identities=15% Similarity=0.070 Sum_probs=130.9
Q ss_pred ceeecCCC-eEEEEEccCCCCCCceEEEEcCCC---CCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHH
Q 022253 24 RTIEIEPG-TILNIWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASF 97 (300)
Q Consensus 24 ~~i~~~~g-~~l~~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~ 97 (300)
..+...+| +.+.++.+.. ...|+||++||.+ ++.. .|..+++.|++. +.|+++|+|.......+. ..++
T Consensus 60 ~~i~~~~g~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~---~~~D 134 (318)
T PRK10162 60 YMVPTPYGQVETRLYYPQP-DSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFPQ---AIEE 134 (318)
T ss_pred EEEecCCCceEEEEECCCC-CCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC---cHHH
Confidence 44444455 5566666643 3568999999977 5556 788888888874 999999999755433222 2333
Q ss_pred H---HHHHHHHHHHhCC--cceEEEEEehhHHHHHHHHHhC------cccccceEEEcccCCCCccchhhhhhccchhhh
Q 022253 98 Q---AECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (300)
Q Consensus 98 ~---~~~~~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (300)
. .+.+.+..+.++. ++++|+|+|+||.+++.++.+. +.++++++++.|........... ..
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~---~~----- 206 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRR---LL----- 206 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHH---Hh-----
Confidence 2 2333333344554 5899999999999999988753 35689999998876532110000 00
Q ss_pred hhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccC
Q 022253 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFD 246 (300)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 246 (300)
.... ..+.......+...+..........+.. .....+.+--.|+++++|+.|.+.+
T Consensus 207 ~~~~-------------------~~l~~~~~~~~~~~y~~~~~~~~~p~~~----p~~~~l~~~lPp~~i~~g~~D~L~d 263 (318)
T PRK10162 207 GGVW-------------------DGLTQQDLQMYEEAYLSNDADRESPYYC----LFNNDLTRDVPPCFIAGAEFDPLLD 263 (318)
T ss_pred CCCc-------------------cccCHHHHHHHHHHhCCCccccCCcccC----cchhhhhcCCCCeEEEecCCCcCcC
Confidence 0000 0011111111111111100000000000 0001111122489999999999875
Q ss_pred HHHHHHHHHHhC---CCceEEEEcCCCCccccc-----ChHHHHHHHHHHHhhcc
Q 022253 247 MQVARNLKEQVG---QNATMESIEKAGHLVNLE-----RPFVYNRQLKTILASLV 293 (300)
Q Consensus 247 ~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~~ 293 (300)
..+.+.+++. ..+++.+++|..|.+... ...+..+.+.+|+++..
T Consensus 264 --e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 264 --DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred --hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 4555555553 358999999999976432 23456777788887653
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.77 E-value=1e-16 Score=119.33 Aligned_cols=177 Identities=19% Similarity=0.159 Sum_probs=116.8
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC--CC---------CChHHHHHHHHHHHHHhC
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PD---------RTASFQAECMAKGLRKLG 110 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~---------~~~~~~~~~~~~~i~~~~ 110 (300)
++.|.||++|++.+-.. ..+.+++.|++. |.|+++|+-+-....... .. ...+...+++.+.++.+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 46899999999998777 888899999998 999999986433311111 00 013445677766677662
Q ss_pred ------CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHH
Q 022253 111 ------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDI 184 (300)
Q Consensus 111 ------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (300)
.+++.++|+|+||.+++.+|.+. +.+++.+..-|......
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------------- 136 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------------- 136 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------------
Confidence 35899999999999999999887 56898888777111000
Q ss_pred hhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHh---CCCc
Q 022253 185 ACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQV---GQNA 261 (300)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~ 261 (300)
......++++|+++++|++|+.++.+..+.+.+.+ ....
T Consensus 137 --------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 178 (218)
T PF01738_consen 137 --------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDV 178 (218)
T ss_dssp --------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTE
T ss_pred --------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcE
Confidence 00023457899999999999999999888877777 3478
Q ss_pred eEEEEcCCCCcccccCh--------HHHHHHHHHHHhhc
Q 022253 262 TMESIEKAGHLVNLERP--------FVYNRQLKTILASL 292 (300)
Q Consensus 262 ~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~ 292 (300)
++++++|++|.+..... ++..+.+.+||+++
T Consensus 179 ~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 179 EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999998876422 34566777888764
No 87
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.76 E-value=4.2e-17 Score=114.60 Aligned_cols=155 Identities=15% Similarity=0.215 Sum_probs=103.9
Q ss_pred EEEEcCCCCCchhhHHHHH-HhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHH
Q 022253 48 VVLLHPFGFDGILTWQFQV-LALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~-~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a 126 (300)
|+++||++++....|.... +.|...++|-.+++ ...+.+.+.+.+.+.+.... +++++||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999998766777665 55655577777665 22367778888877777664 579999999999999
Q ss_pred HHHH-HhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHh
Q 022253 127 FKMA-EMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALS 205 (300)
Q Consensus 127 ~~~a-~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (300)
+.++ .....+|++++|++|+..............+
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f-------------------------------------------- 105 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGF-------------------------------------------- 105 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCC--------------------------------------------
T ss_pred HHHHhhcccccccEEEEEcCCCcccccchhhhcccc--------------------------------------------
Confidence 9999 7777899999999998542000000000000
Q ss_pred cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCccccc
Q 022253 206 DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE 276 (300)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 276 (300)
.......+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+
T Consensus 106 -----------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 106 -----------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAAS 157 (171)
T ss_dssp -----------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGG
T ss_pred -----------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCccccc
Confidence 00112234567799999999999999999999999 79999999999987553
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.75 E-value=9.3e-17 Score=119.05 Aligned_cols=177 Identities=19% Similarity=0.228 Sum_probs=108.2
Q ss_pred CCCCceEEEEcCCCCCchhhHHHHHH-hhhc-CceEEeecCCC------CCC---CCCCC----C-----CCChHHHHHH
Q 022253 42 TTKKHAVVLLHPFGFDGILTWQFQVL-ALAK-TYEVYVPDFLF------FGS---SVTDR----P-----DRTASFQAEC 101 (300)
Q Consensus 42 ~~~~~~vv~lhG~~~~~~~~~~~~~~-~l~~-~~~v~~~d~~G------~G~---s~~~~----~-----~~~~~~~~~~ 101 (300)
.+..++|||+||+|++.. .+..+.. .+.. +..++.++-|. .|. +-.+. . ...+...++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 357889999999999987 7776665 2222 26677665431 232 11111 0 0112233444
Q ss_pred HHHHHHHh-----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHH
Q 022253 102 MAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTAD 176 (300)
Q Consensus 102 ~~~~i~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (300)
+.++++.. ..+++++.|+|.||.+++.++.++|+.+.++|.+++..........
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~--------------------- 148 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELED--------------------- 148 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHC---------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccc---------------------
Confidence 55555543 3458999999999999999999999999999999987542211000
Q ss_pred HHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHH
Q 022253 177 ALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQ 256 (300)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 256 (300)
...... ++|++++||.+|+++|.+.++...+.
T Consensus 149 ----------------------------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~ 180 (216)
T PF02230_consen 149 ----------------------------------------------RPEALA--KTPILIIHGDEDPVVPFEWAEKTAEF 180 (216)
T ss_dssp ----------------------------------------------CHCCCC--TS-EEEEEETT-SSSTHHHHHHHHHH
T ss_pred ----------------------------------------------cccccC--CCcEEEEecCCCCcccHHHHHHHHHH
Confidence 000111 68999999999999999888887777
Q ss_pred hC---CCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 257 VG---QNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 257 ~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+. .++++..+++.||... .+..+.+.+||+++
T Consensus 181 L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 181 LKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 64 2578999999999774 45666788888764
No 89
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.75 E-value=2.7e-17 Score=130.82 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=85.3
Q ss_pred CCCceEEEEcCCCCCch-hhHHH-HHHhhh--c-CceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------CC
Q 022253 43 TKKHAVVLLHPFGFDGI-LTWQF-QVLALA--K-TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------GV 111 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~-~~~~~-~~~~l~--~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~------~~ 111 (300)
.++|++|++||++++.. ..|.. +++.|. . +++|+++|++|+|.+..+.........++++.++++.+ +.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 36899999999987542 25765 555553 2 49999999999998876654444566777888888765 36
Q ss_pred cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 112 EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 112 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
++++||||||||.+|..++..+|++|.++++++|..+.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 79999999999999999999999999999999997653
No 90
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.75 E-value=1.1e-15 Score=123.97 Aligned_cols=235 Identities=12% Similarity=0.087 Sum_probs=140.6
Q ss_pred CCeEEEEEccCC-CCCCceEEEEcCCCCCchhhH-----HHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHH
Q 022253 30 PGTILNIWVPKK-TTKKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM 102 (300)
Q Consensus 30 ~g~~l~~~~~~~-~~~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 102 (300)
+-.++..|.+.. ...++|||+++.+-.... .+ +.+++.|.++ |.|+.+|+++-+.+. ...+++++++.+
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~Y-IlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i 274 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFY-IFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDAL 274 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhh-eeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHH
Confidence 345555555432 245789999999986555 55 4688888888 999999999866553 457788888777
Q ss_pred HHHHHHh----CCcceEEEEEehhHHHHHH----HHHhCcc-cccceEEEcccCCCCccchhhhhh-------------c
Q 022253 103 AKGLRKL----GVEKCTLVGVSYGGMVGFK----MAEMYPD-LVESMVVTCSVMGLTESVSNAALE-------------R 160 (300)
Q Consensus 103 ~~~i~~~----~~~~~~lvG~S~Gg~~a~~----~a~~~p~-~v~~~vl~~~~~~~~~~~~~~~~~-------------~ 160 (300)
.+.++.+ +.+++.++|+|+||.++.. +++++++ +|++++++.++..+.......... .
T Consensus 275 ~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~ 354 (560)
T TIGR01839 275 KEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQ 354 (560)
T ss_pred HHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHh
Confidence 7777665 6789999999999999986 7888886 799999999887765322111000 0
Q ss_pred cch---h---hhhhccCcccHHHHHHHH-HHhhccCCCChHHHHHHHHHHHhcch-hhHHHHHHHhhh------------
Q 022253 161 IGY---E---SWVDFLLPKTADALKVQF-DIACYKLPTLPAFVYKHILEALSDHR-KERIELLQALVI------------ 220 (300)
Q Consensus 161 ~~~---~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------ 220 (300)
.+. . .....+.+... +..+. ............. ...+........ .....+.. +..
T Consensus 355 ~G~lpg~~ma~~F~~LrP~dl--iw~y~v~~yllg~~p~~fd-ll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v 430 (560)
T TIGR01839 355 AGVLDGSEMAKVFAWMRPNDL--IWNYWVNNYLLGNEPPAFD-ILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEV 430 (560)
T ss_pred cCCcCHHHHHHHHHhcCchhh--hHHHHHHHhhcCCCcchhh-HHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEE
Confidence 000 0 00000111100 11111 1110000000000 001111000000 01111111 111
Q ss_pred cccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcc
Q 022253 221 SDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLV 273 (300)
Q Consensus 221 ~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 273 (300)
......+.+|+||++++.|+.|.++|++.+..+.+.+.+..+++..+ +||..
T Consensus 431 ~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 431 CGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred CCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 11225788899999999999999999999999999998667777665 68854
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=99.72 E-value=4.4e-16 Score=111.86 Aligned_cols=174 Identities=17% Similarity=0.193 Sum_probs=119.6
Q ss_pred CCCCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCC--CCC----CCCCCCCCChHH-------HHHHHHHHHH
Q 022253 41 KTTKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLF--FGS----SVTDRPDRTASF-------QAECMAKGLR 107 (300)
Q Consensus 41 ~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G--~G~----s~~~~~~~~~~~-------~~~~~~~~i~ 107 (300)
..+..|+||++||+|++.. .+.++...+..++.++.+.-+- .|. +......++.++ +++.+..+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3456778999999999988 8888777666666666653210 010 011111122232 3344455555
Q ss_pred HhCC--cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHh
Q 022253 108 KLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIA 185 (300)
Q Consensus 108 ~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (300)
+.+. ++++++|+|.||++++.+..++|+.+++++++++........
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~-------------------------------- 140 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL-------------------------------- 140 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc--------------------------------
Confidence 5565 689999999999999999999999999999999876533210
Q ss_pred hccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC---CCce
Q 022253 186 CYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG---QNAT 262 (300)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~ 262 (300)
.-..-..|+++++|+.|+++|...+.++.+.+. .+++
T Consensus 141 ----------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~ 180 (207)
T COG0400 141 ----------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVE 180 (207)
T ss_pred ----------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEE
Confidence 011235689999999999999988877776664 3678
Q ss_pred EEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 263 MESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 263 ~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
...++ .||.... +-.+.+.+|+.+.
T Consensus 181 ~~~~~-~GH~i~~----e~~~~~~~wl~~~ 205 (207)
T COG0400 181 VRWHE-GGHEIPP----EELEAARSWLANT 205 (207)
T ss_pred EEEec-CCCcCCH----HHHHHHHHHHHhc
Confidence 88888 7997754 3455566677653
No 92
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.72 E-value=1.7e-15 Score=103.81 Aligned_cols=171 Identities=18% Similarity=0.190 Sum_probs=120.7
Q ss_pred CCCCceEEEEcCCC---CCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC---C-c
Q 022253 42 TTKKHAVVLLHPFG---FDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG---V-E 112 (300)
Q Consensus 42 ~~~~~~vv~lhG~~---~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~---~-~ 112 (300)
.+..|..|++|.-+ ++.. ..-..++..|.+. |.++.+|+||.|.|...-... ..+ .+|..+.++++. . .
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G-iGE-~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG-IGE-LEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC-cch-HHHHHHHHHHHHhhCCCc
Confidence 35678888888533 2222 1445667778888 999999999999998765331 111 344444444442 2 2
Q ss_pred c-eEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCC
Q 022253 113 K-CTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPT 191 (300)
Q Consensus 113 ~-~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (300)
+ ..+.|+|+|+++++.+|.+.|+ ....+.+.|.....
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----------------------------------------- 140 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----------------------------------------- 140 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-----------------------------------------
Confidence 3 3688999999999999999986 55555555544300
Q ss_pred ChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCC
Q 022253 192 LPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGH 271 (300)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 271 (300)
....+....+|.++|+|+.|.+++....-++.+.. ..+++.+++++|
T Consensus 141 -------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~H 187 (210)
T COG2945 141 -------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADH 187 (210)
T ss_pred -------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCc
Confidence 00123446778999999999999988887777763 678899999999
Q ss_pred cccccChHHHHHHHHHHHh
Q 022253 272 LVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 272 ~~~~~~~~~~~~~i~~fl~ 290 (300)
|++- +-..+.+.|.+||.
T Consensus 188 FF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 188 FFHG-KLIELRDTIADFLE 205 (210)
T ss_pred eecc-cHHHHHHHHHHHhh
Confidence 9875 55679999999995
No 93
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.71 E-value=5.4e-17 Score=123.85 Aligned_cols=123 Identities=17% Similarity=0.118 Sum_probs=87.3
Q ss_pred ceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCc-hhhHHH-HHHh-hhcC-ceEEeecCCCCCCCCCCCCCCChHHHH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDG-ILTWQF-QVLA-LAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~-~~~~~~-~~~~-l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 99 (300)
+.+...|+..+.+.... +++|++|++||++++. . .|.. +.+. |.+. ++|+++|+++++.+..+....+....+
T Consensus 17 ~~~~~~~~~~~~~~~f~--~~~p~vilIHG~~~~~~~-~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~ 93 (275)
T cd00707 17 QLLFADDPSSLKNSNFN--PSRPTRFIIHGWTSSGEE-SWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVG 93 (275)
T ss_pred eEecCCChhhhhhcCCC--CCCCcEEEEcCCCCCCCC-cHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHH
Confidence 33444345555554444 3689999999999987 4 6654 3443 4444 999999999884433222223445555
Q ss_pred HHHHHHHHHh------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 100 ECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 100 ~~~~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
+++..+++.+ +.+++++||||+||.+|..++.++|++|+++++++|..+.
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 6666666654 3468999999999999999999999999999999987653
No 94
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.70 E-value=4.4e-16 Score=130.97 Aligned_cols=121 Identities=19% Similarity=0.133 Sum_probs=92.3
Q ss_pred ecCCCeEEEEE--ccCCCCCCceEEEEcCCCCCchh--hH-HHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHH
Q 022253 27 EIEPGTILNIW--VPKKTTKKHAVVLLHPFGFDGIL--TW-QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAE 100 (300)
Q Consensus 27 ~~~~g~~l~~~--~~~~~~~~~~vv~lhG~~~~~~~--~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 100 (300)
...||.+|++. .+...++.|+||++||++.+... .+ ......|.++ |.|+++|+||+|.|+......+ ...++
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~ 80 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAA 80 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccch
Confidence 45689999853 34333467899999999876420 12 2234566666 9999999999999987654443 55688
Q ss_pred HHHHHHHHhCC-----cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 101 CMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 101 ~~~~~i~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
|+.++++.+.. .++.++|+|+||.+++.+|..+|+.+++++..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 88888887732 4899999999999999999999999999999887754
No 95
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=1.2e-14 Score=108.03 Aligned_cols=195 Identities=18% Similarity=0.138 Sum_probs=140.8
Q ss_pred ceeecCCCeEEE-EEc-cCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCC-CCCCCCC-------C-
Q 022253 24 RTIEIEPGTILN-IWV-PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDR-------P- 91 (300)
Q Consensus 24 ~~i~~~~g~~l~-~~~-~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~-------~- 91 (300)
..+..+| .++. |.. +....+.|.||++|++.+-.. ..+.+++.|++. |.|+++|+-+. |.+.... .
T Consensus 5 v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~ 82 (236)
T COG0412 5 VTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG 82 (236)
T ss_pred eEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh
Confidence 3445544 4554 332 333333489999999999888 999999999999 99999998763 3222111 0
Q ss_pred ---CCChHHHHHHHHHHHHHhC------CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccc
Q 022253 92 ---DRTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162 (300)
Q Consensus 92 ---~~~~~~~~~~~~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (300)
..+......|+.+.++.+. .+++.++|+||||.+++.++...| .+++.+..-+......
T Consensus 83 ~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~----------- 150 (236)
T COG0412 83 LVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD----------- 150 (236)
T ss_pred hhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc-----------
Confidence 1223566788888888773 357999999999999999999887 5888887776543110
Q ss_pred hhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCC
Q 022253 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 242 (300)
.....++++|+++..|+.|
T Consensus 151 -------------------------------------------------------------~~~~~~~~~pvl~~~~~~D 169 (236)
T COG0412 151 -------------------------------------------------------------TADAPKIKVPVLLHLAGED 169 (236)
T ss_pred -------------------------------------------------------------ccccccccCcEEEEecccC
Confidence 0123578999999999999
Q ss_pred cccCHHHHHHHHHHhCC---CceEEEEcCCCCcccccC-----------hHHHHHHHHHHHhhcc
Q 022253 243 KIFDMQVARNLKEQVGQ---NATMESIEKAGHLVNLER-----------PFVYNRQLKTILASLV 293 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 293 (300)
..+|.+....+.+.+.. ..++.+++++.|.++-+. .+.-.+.+.+|+++..
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 170 PYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999888887777652 478899999889887432 2346677888887654
No 96
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.69 E-value=8.4e-15 Score=104.03 Aligned_cols=180 Identities=18% Similarity=0.176 Sum_probs=112.1
Q ss_pred EEEEcCCCCCchhhHHH--HHHhhhcC---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehh
Q 022253 48 VVLLHPFGFDGILTWQF--QVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~--~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~G 122 (300)
|+++||+.++.. .... +.+.+++. ..+.++|++ ...+...+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999887 5543 34555543 466777765 456777888999999988778999999999
Q ss_pred HHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHH
Q 022253 123 GMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILE 202 (300)
Q Consensus 123 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (300)
|+.|..+|.+++ +++ |+++|...+........-.... . .......+...
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~-~--------------------~~~e~~~~~~~------- 118 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTN-P--------------------YTGESYELTEE------- 118 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCcccc-C--------------------CCCccceechH-------
Confidence 999999999886 444 8999987643221111000000 0 00000000000
Q ss_pred HHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHH
Q 022253 203 ALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYN 282 (300)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 282 (300)
....+.. .......-..+++++.++.|.+++.+.+ .+... ++..++.+|++|-+. +-++..
T Consensus 119 -----------~~~~l~~--l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~-~~~~~i~~ggdH~f~--~f~~~l 179 (187)
T PF05728_consen 119 -----------HIEELKA--LEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYR-GCAQIIEEGGDHSFQ--DFEEYL 179 (187)
T ss_pred -----------hhhhcce--EeccccCCCccEEEEEecCCcccCHHHH---HHHhc-CceEEEEeCCCCCCc--cHHHHH
Confidence 0000000 0011123356899999999999998444 34444 556667788899763 566778
Q ss_pred HHHHHHH
Q 022253 283 RQLKTIL 289 (300)
Q Consensus 283 ~~i~~fl 289 (300)
..|.+|+
T Consensus 180 ~~i~~f~ 186 (187)
T PF05728_consen 180 PQIIAFL 186 (187)
T ss_pred HHHHHhh
Confidence 8888886
No 97
>PRK10115 protease 2; Provisional
Probab=99.67 E-value=1.7e-14 Score=123.43 Aligned_cols=214 Identities=13% Similarity=0.088 Sum_probs=135.7
Q ss_pred ccceeecCCCeEEEEE-c--cC--CCCCCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCC------
Q 022253 22 TQRTIEIEPGTILNIW-V--PK--KTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVT------ 88 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~-~--~~--~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~------ 88 (300)
+..++...||.+|.++ . ++ ..++.|.||++||..+... ..|......|.++ |.|+.++.||-|.-..
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g 496 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDG 496 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhh
Confidence 4445666799998852 2 21 1245699999999887664 3566666667666 9999999998654332
Q ss_pred --CCCCCChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchh
Q 022253 89 --DRPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYE 164 (300)
Q Consensus 89 --~~~~~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 164 (300)
.....+++++++.+..+++.= ..+++.+.|.|.||+++..++.++|++++++|...|........... .
T Consensus 497 ~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~---~---- 569 (686)
T PRK10115 497 KFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE---S---- 569 (686)
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC---C----
Confidence 112245555555555555442 34589999999999999999999999999999998876532110000 0
Q ss_pred hhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcce-EEEEeeCCCc
Q 022253 165 SWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQK-IHLLWGENDK 243 (300)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~ 243 (300)
.+.... . +. .+...+ .......+...++...+.+++.| +|+++|.+|.
T Consensus 570 ------~p~~~~---~-~~--e~G~p~-------------------~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~ 618 (686)
T PRK10115 570 ------IPLTTG---E-FE--EWGNPQ-------------------DPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDS 618 (686)
T ss_pred ------CCCChh---H-HH--HhCCCC-------------------CHHHHHHHHHcCchhccCccCCCceeEEecCCCC
Confidence 000000 0 00 000000 01111222223344566778889 5677999999
Q ss_pred ccCHHHHHHHHHHhC---CCceEEEE---cCCCCcc
Q 022253 244 IFDMQVARNLKEQVG---QNATMESI---EKAGHLV 273 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~---~~~~~~~~---~~~gH~~ 273 (300)
-|++..+.++..++. ...+++++ +++||..
T Consensus 619 RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 619 QVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred CcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 999999988888875 24567777 8999984
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.67 E-value=3.5e-15 Score=112.42 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=101.8
Q ss_pred cccceeecCCCeEEEEEccCCC-----CCCceEEEEcCCCCCchhhHHHHHHhhhc--------C--ceEEeecCCCCCC
Q 022253 21 MTQRTIEIEPGTILNIWVPKKT-----TKKHAVVLLHPFGFDGILTWQFQVLALAK--------T--YEVYVPDFLFFGS 85 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~-----~~~~~vv~lhG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~G~G~ 85 (300)
+...+-++ .|.++|+....++ ..-.|++++|||+|+.. .|..+++.|.+ + |.||++.+||+|-
T Consensus 124 f~qykTeI-eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygw 201 (469)
T KOG2565|consen 124 FKQYKTEI-EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGW 201 (469)
T ss_pred hhhhhhhh-cceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCccc
Confidence 33444455 6999998654432 12348999999999999 88888887753 2 8999999999999
Q ss_pred CCCCC-CCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEccc
Q 022253 86 SVTDR-PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 86 s~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
|+.+. ...+....+.-+..++-.+|.+++.+-|-.||+.++..+|..+|+.|.|+-+-.+.
T Consensus 202 Sd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 202 SDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 99887 45788888999999999999999999999999999999999999999887654443
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=6.2e-15 Score=106.50 Aligned_cols=223 Identities=20% Similarity=0.199 Sum_probs=144.2
Q ss_pred CCeEEEEE--ccCCC-CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC-----C----------
Q 022253 30 PGTILNIW--VPKKT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR-----P---------- 91 (300)
Q Consensus 30 ~g~~l~~~--~~~~~-~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-----~---------- 91 (300)
+|.+|.-| .+... +..|.||-.||.++... .|..+...-...|.|+.+|.||.|.|+... .
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrG 143 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRG 143 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEee
Confidence 77788744 33332 46789999999999998 887766544445999999999999884311 1
Q ss_pred ------CCChHHHHHHHHHHHHHh------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhh
Q 022253 92 ------DRTASFQAECMAKGLRKL------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALE 159 (300)
Q Consensus 92 ------~~~~~~~~~~~~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~ 159 (300)
.+-+.....|+..+++.+ +.+++.+.|.|.||.+++.+++..| ++++++..-|.....+.
T Consensus 144 ilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r------- 215 (321)
T COG3458 144 ILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR------- 215 (321)
T ss_pred cccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-------
Confidence 011222344555555544 4568999999999999999988776 69998888776542211
Q ss_pred ccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEee
Q 022253 160 RIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWG 239 (300)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (300)
............+..+++. ........+..+...+......++++|+|+..|
T Consensus 216 ------~i~~~~~~~ydei~~y~k~----------------------h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svg 267 (321)
T COG3458 216 ------AIELATEGPYDEIQTYFKR----------------------HDPKEAEVFETLSYFDIVNLAARIKVPVLMSVG 267 (321)
T ss_pred ------heeecccCcHHHHHHHHHh----------------------cCchHHHHHHHHhhhhhhhHHHhhccceEEeec
Confidence 1111111111111111111 111112223333333344456789999999999
Q ss_pred CCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 240 ENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 240 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
-.|+++|+...-..++.++...++.+++.-+|.- -|.-..+.+..|++..
T Consensus 268 L~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~---~p~~~~~~~~~~l~~l 317 (321)
T COG3458 268 LMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG---GPGFQSRQQVHFLKIL 317 (321)
T ss_pred ccCCCCCChhhHHHhhcccCCceEEEeecccccc---CcchhHHHHHHHHHhh
Confidence 9999999999999999998777888888767753 4454556677777654
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=4e-15 Score=104.87 Aligned_cols=255 Identities=16% Similarity=0.057 Sum_probs=147.6
Q ss_pred ceeecCCCeEEEEEccCCCCCCc-eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCC---CChHHH
Q 022253 24 RTIEIEPGTILNIWVPKKTTKKH-AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD---RTASFQ 98 (300)
Q Consensus 24 ~~i~~~~g~~l~~~~~~~~~~~~-~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~---~~~~~~ 98 (300)
-.+..+||..+........+..+ .++.-.+.+.... .|++++..+++. |.|+++|+||.|.|+..... ..+.++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 34566799988765554434444 4444455555555 889999999888 99999999999999876533 455555
Q ss_pred H-HHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcc
Q 022253 99 A-ECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPK 173 (300)
Q Consensus 99 ~-~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (300)
+ .|+.+.++.+ ...+...||||+||.+.-.+. +++ +..+....+........+... ..+....+..... .
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~--~~l~~~~l~~lv~-p 161 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLR--ERLGAVLLWNLVG-P 161 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhh--hcccceeeccccc-c
Confidence 3 4555555554 445899999999998665444 455 566666666554433222110 0000000000000 0
Q ss_pred cHHHHHHHHHHh-hccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHH
Q 022253 174 TADALKVQFDIA-CYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARN 252 (300)
Q Consensus 174 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 252 (300)
....+...+... .......+...++++.............-. .....+....+++|++++...+|+.+|+...+.
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~----~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~ 237 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA----MRNYRQVYAAVRTPITFSRALDDPWAPPASRDA 237 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh----HhHHHHHHHHhcCceeeeccCCCCcCCHHHHHH
Confidence 011111111111 111223455555555444331111000000 000112335688999999999999999999999
Q ss_pred HHHHhCCCce--EEEEcC----CCCcccccCh-HHHHHHHHHHH
Q 022253 253 LKEQVGQNAT--MESIEK----AGHLVNLERP-FVYNRQLKTIL 289 (300)
Q Consensus 253 ~~~~~~~~~~--~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 289 (300)
+.+..+ ++. ...++. .||+-...++ |.+.+.+.+|+
T Consensus 238 f~~~y~-nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 238 FASFYR-NAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHhhh-cCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 998887 554 344443 4999888777 77888887775
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.64 E-value=5.7e-14 Score=110.62 Aligned_cols=272 Identities=17% Similarity=0.133 Sum_probs=158.8
Q ss_pred CcccceeecCCCeEEEEEcc-CCCCCCceEEEEcCCCCCchhhHHH------HHHhhhcC-ceEEeecCCCCCCCCCCC-
Q 022253 20 GMTQRTIEIEPGTILNIWVP-KKTTKKHAVVLLHPFGFDGILTWQF------QVLALAKT-YEVYVPDFLFFGSSVTDR- 90 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~-~~~~~~~~vv~lhG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~G~G~s~~~~- 90 (300)
..+++.+.+.||..+..... ...+++|+|++.||+.+++. .|-. ++-.|++. |.|+.-+.||...|....
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~ 125 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKK 125 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcccchhhcc
Confidence 36788899999987765432 22268899999999999988 8753 34457777 999999999976664321
Q ss_pred ---------CCCChHHHH-HHHHHHHH----HhCCcceEEEEEehhHHHHHHHHHhCcc---cccceEEEcccCCCCcc-
Q 022253 91 ---------PDRTASFQA-ECMAKGLR----KLGVEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMGLTES- 152 (300)
Q Consensus 91 ---------~~~~~~~~~-~~~~~~i~----~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~~~- 152 (300)
.+.++++++ -||-+.|+ ..+.++++.+|||.|+.....++...|+ +|+.+++++|.......
T Consensus 126 l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~ 205 (403)
T KOG2624|consen 126 LSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIK 205 (403)
T ss_pred cCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccc
Confidence 224555543 34555444 4477899999999999999999988876 79999999998744311
Q ss_pred -chhhhhhcc-ch-hhhhhccCc----ccHHHHHHHHHHhhccC--------------CCChHHHHHHHH-HHHhc----
Q 022253 153 -VSNAALERI-GY-ESWVDFLLP----KTADALKVQFDIACYKL--------------PTLPAFVYKHIL-EALSD---- 206 (300)
Q Consensus 153 -~~~~~~~~~-~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~---- 206 (300)
......... .. ..+...+.. ........+........ ............ .....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pa 285 (403)
T KOG2624|consen 206 SLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPA 285 (403)
T ss_pred cHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCC
Confidence 000000000 00 000000000 00000000111000000 000000000000 00000
Q ss_pred --chhhHHHHHH--------------------HhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEE
Q 022253 207 --HRKERIELLQ--------------------ALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATME 264 (300)
Q Consensus 207 --~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
.......+.+ .-....+...+..+++|+.+.+|++|.++.++....+...++ ++...
T Consensus 286 gtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~-~~~~~ 364 (403)
T KOG2624|consen 286 GTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLP-NSVIK 364 (403)
T ss_pred CccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcc-ccccc
Confidence 0000000111 001112335677789999999999999999999998888877 44332
Q ss_pred E---EcCCCCcccc---cChHHHHHHHHHHHhhcc
Q 022253 265 S---IEKAGHLVNL---ERPFVYNRQLKTILASLV 293 (300)
Q Consensus 265 ~---~~~~gH~~~~---~~~~~~~~~i~~fl~~~~ 293 (300)
. +++-.|.-++ +.++++.+.|.+.++...
T Consensus 365 ~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 365 YIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 2 7888997554 578999999999888654
No 102
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.63 E-value=1.1e-13 Score=98.56 Aligned_cols=227 Identities=15% Similarity=0.230 Sum_probs=119.4
Q ss_pred cceeecCCCeEEEEEccCCC----CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCC-CCCCCCCCCCChH
Q 022253 23 QRTIEIEPGTILNIWVPKKT----TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF-GSSVTDRPDRTAS 96 (300)
Q Consensus 23 ~~~i~~~~g~~l~~~~~~~~----~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~~ 96 (300)
.+.+...+|.+|+.|+..+. ...++||+-+|++.... .|..++.+|+.+ |+|+.+|.-.| |.|++....+++.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 35677889999999876542 34589999999999999 999999999999 99999998877 9999888889999
Q ss_pred HHHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhcc--C
Q 022253 97 FQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFL--L 171 (300)
Q Consensus 97 ~~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 171 (300)
...+++..+++++ +.+++.|++-|+.|-+|+..|++- + +.-+|..-+.......... ..++..+.... .
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i-~-lsfLitaVGVVnlr~TLe~----al~~Dyl~~~i~~l 156 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI-N-LSFLITAVGVVNLRDTLEK----ALGYDYLQLPIEQL 156 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHHHHH----HHSS-GGGS-GGG-
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc-C-cceEEEEeeeeeHHHHHHH----HhccchhhcchhhC
Confidence 9999998888877 677899999999999999999854 3 6666666655543221111 11111000000 0
Q ss_pred cccHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHH
Q 022253 172 PKTADALKVQFDIACYKLPTL-PAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVA 250 (300)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 250 (300)
+... -+..... .+.+..+..+.-+.... .. ...+..+.+|++.+++++|..|.....
T Consensus 157 p~dl----------dfeGh~l~~~vFv~dc~e~~w~~l~---ST---------~~~~k~l~iP~iaF~A~~D~WV~q~eV 214 (294)
T PF02273_consen 157 PEDL----------DFEGHNLGAEVFVTDCFEHGWDDLD---ST---------INDMKRLSIPFIAFTANDDDWVKQSEV 214 (294)
T ss_dssp -SEE----------EETTEEEEHHHHHHHHHHTT-SSHH---HH---------HHHHTT--S-EEEEEETT-TTS-HHHH
T ss_pred CCcc----------cccccccchHHHHHHHHHcCCccch---hH---------HHHHhhCCCCEEEEEeCCCccccHHHH
Confidence 0000 0000000 11111111111111111 11 123466789999999999999999888
Q ss_pred HHHHHHhC-CCceEEEEcCCCCcccccChH
Q 022253 251 RNLKEQVG-QNATMESIEKAGHLVNLERPF 279 (300)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~ 279 (300)
..+.+.+. +.++++.++|++|.+- |++-
T Consensus 215 ~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 215 EELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp HHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred HHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 88887665 4689999999999874 4543
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.62 E-value=2.8e-15 Score=90.67 Aligned_cols=76 Identities=24% Similarity=0.200 Sum_probs=65.7
Q ss_pred CeEEEEEccCCCCC-CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCC-CChHHHHHHHHHHHH
Q 022253 31 GTILNIWVPKKTTK-KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPD-RTASFQAECMAKGLR 107 (300)
Q Consensus 31 g~~l~~~~~~~~~~-~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~i~ 107 (300)
|.+|++..+.++.+ +.+|+++||++.++. .|..+++.|+++ |.|+++|+||||.|+..... .+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 67788877666554 889999999999999 999999999999 99999999999999975543 688999999998864
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.62 E-value=3.8e-15 Score=111.53 Aligned_cols=231 Identities=15% Similarity=0.071 Sum_probs=85.3
Q ss_pred CCceEEEEcCCCCCch--hhHHHHHHhhhcC-ceEEeecCC----CCCCCCCCCCCCChHHHHHHHHHHHHHh-------
Q 022253 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFL----FFGSSVTDRPDRTASFQAECMAKGLRKL------- 109 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~i~~~------- 109 (300)
....||||.|++.... ++...+++.|... |.++-+-++ |+|. .+++..++||.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-------~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT-------SSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc-------chhhhHHHHHHHHHHHHHHhhccc
Confidence 5668999999987544 3667788899765 999988765 4443 45777888888888765
Q ss_pred -CCcceEEEEEehhHHHHHHHHHhCc-----ccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHH
Q 022253 110 -GVEKCTLVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFD 183 (300)
Q Consensus 110 -~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (300)
+.++|+|+|||.|+.-++.|+.... ..|+++|+-+|............. +..+.. .....++...
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~-~~~~~~--------~v~~A~~~i~ 175 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE-REAYEE--------LVALAKELIA 175 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH----HHH--------HHHHHHHHHH
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc-hHHHHH--------HHHHHHHHHH
Confidence 2458999999999999999997652 569999999998764321110000 000000 0000000000
Q ss_pred Hhh---------ccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHH-HHHH
Q 022253 184 IAC---------YKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQV-ARNL 253 (300)
Q Consensus 184 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~ 253 (300)
... ....+....+....+...........-+...+........+.++++|+|++.+++|..+|... .+.+
T Consensus 176 ~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~L 255 (303)
T PF08538_consen 176 EGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEAL 255 (303)
T ss_dssp CT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-----------
T ss_pred cCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccc
Confidence 000 000000000111111111111111111222222223335667788899999999999998753 2334
Q ss_pred HHHhCC-------CceEEEEcCCCCcccccCh----HHHHHHHHHHHh
Q 022253 254 KEQVGQ-------NATMESIEKAGHLVNLERP----FVYNRQLKTILA 290 (300)
Q Consensus 254 ~~~~~~-------~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 290 (300)
.+++.. ...--++||++|.+--+.. +.+.+.|..||+
T Consensus 256 l~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 256 LERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 443330 1224589999998865332 357777788874
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.60 E-value=3.5e-13 Score=89.52 Aligned_cols=181 Identities=14% Similarity=0.077 Sum_probs=128.2
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCC-----CCCCCCC-CCCChHHHHHHHHHHHHHhCCcceE
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFF-----GSSVTDR-PDRTASFQAECMAKGLRKLGVEKCT 115 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~-----G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 115 (300)
..-+||+-||.+.+.+ ......+..|+.. +.|..|+++-. |....++ ...-...+...+.++.+.+...|.+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 3457899999998766 3556677888888 99999998743 3222222 2344566778888888888778999
Q ss_pred EEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHH
Q 022253 116 LVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAF 195 (300)
Q Consensus 116 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (300)
+-|+||||-++..++..-...|+++++++-+...+.... .
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe----------------------------------------~ 132 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE----------------------------------------Q 132 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc----------------------------------------c
Confidence 999999999999998766556999999886544221100 0
Q ss_pred HHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc
Q 022253 196 VYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 275 (300)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 275 (300)
-....+..+++|++|.+|+.|.+-..+..... .+....++++++++.|.+--
T Consensus 133 --------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDLkp 184 (213)
T COG3571 133 --------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDLKP 184 (213)
T ss_pred --------------------------chhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCcccccc
Confidence 01135678999999999999999877665332 23347899999999997532
Q ss_pred ----------cChHHHHHHHHHHHhhc
Q 022253 276 ----------ERPFVYNRQLKTILASL 292 (300)
Q Consensus 276 ----------~~~~~~~~~i~~fl~~~ 292 (300)
++-...++.|..|+..+
T Consensus 185 ~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 185 RKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhc
Confidence 12344667777777654
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.59 E-value=4.3e-13 Score=91.03 Aligned_cols=173 Identities=14% Similarity=0.071 Sum_probs=118.2
Q ss_pred CceEEEEcCCCCCchhhHHHHHH-hhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVL-ALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~-~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
.+.+|++||+.++....|....+ .| -.+-.+++. .......+++++.+.+.+... .++++||+||+|+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc 70 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGC 70 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccH
Confidence 35689999998877646665432 22 223333332 123356788888888888877 4679999999999
Q ss_pred HHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHH
Q 022253 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEA 203 (300)
Q Consensus 124 ~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (300)
..++.++.+....|+|+++++|+-...+.........+
T Consensus 71 ~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf------------------------------------------ 108 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTF------------------------------------------ 108 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCCCccccccchhhcccc------------------------------------------
Confidence 99999998877789999999987542211100000000
Q ss_pred HhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc---cChHH
Q 022253 204 LSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL---ERPFV 280 (300)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~ 280 (300)
......+..-|.+++.+.+|++++.+.++.+++.+ +..++...++||+.-. ..-.+
T Consensus 109 -------------------~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpe 167 (181)
T COG3545 109 -------------------DPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPE 167 (181)
T ss_pred -------------------CCCccccCCCceeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHH
Confidence 00122345568999999999999999999999998 5778888889997543 23455
Q ss_pred HHHHHHHHHhh
Q 022253 281 YNRQLKTILAS 291 (300)
Q Consensus 281 ~~~~i~~fl~~ 291 (300)
....+.+|+.+
T Consensus 168 g~~~l~~~~s~ 178 (181)
T COG3545 168 GYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHhhh
Confidence 66666666654
No 107
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.59 E-value=1.2e-12 Score=99.52 Aligned_cols=103 Identities=15% Similarity=0.072 Sum_probs=86.1
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhh----cCceEEeecCCCCCCCCCC------CCCCChHHHHHHHHHHHHHhC----
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALA----KTYEVYVPDFLFFGSSVTD------RPDRTASFQAECMAKGLRKLG---- 110 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~i~~~~---- 110 (300)
+..+||++|.+|-.. .|..+++.|. .++.|+++.+.||-.++.. ...++.+++++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~-fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE-FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHH-HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 567999999999999 9999987776 3499999999999776654 245888888887777776652
Q ss_pred --CcceEEEEEehhHHHHHHHHHhCc---ccccceEEEcccCC
Q 022253 111 --VEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMG 148 (300)
Q Consensus 111 --~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~ 148 (300)
..+++++|||.|++++++++.+.+ .+|.+++++-|...
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 357999999999999999999999 68999999998854
No 108
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.57 E-value=1.7e-13 Score=105.83 Aligned_cols=244 Identities=14% Similarity=0.093 Sum_probs=142.9
Q ss_pred CCceEEEEcCCCCCchhhH-----HHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHH-----HHHHHHHHHhCCc
Q 022253 44 KKHAVVLLHPFGFDGILTW-----QFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-----ECMAKGLRKLGVE 112 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-----~~~~~~i~~~~~~ 112 (300)
-++|++++|.+-.... .+ ..++..|.++ +.|+.+++++-..+.. ..++++++ +.+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~y-i~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFY-ILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCcee-EEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 5789999999876554 44 3567777777 9999999987555443 34555554 4455555566889
Q ss_pred ceEEEEEehhHHHHHHHHHhCccc-ccceEEEcccCCCCccchhhh------hhccchhhhh-------------hccCc
Q 022253 113 KCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLTESVSNAA------LERIGYESWV-------------DFLLP 172 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~~~~------~~~~~~~~~~-------------~~~~~ 172 (300)
++.++|+|.||+++..+++.++.+ |++++++.+...+........ .......... ..+.+
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999988887 999999988776543221111 1110000000 00001
Q ss_pred ccHHHHHHHHHHhhccCC--------------CChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEe
Q 022253 173 KTADALKVQFDIACYKLP--------------TLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLW 238 (300)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 238 (300)
.. -....++........ .++......+++.++....-.. ..+........+.+|+||++++.
T Consensus 262 nd-liw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~---g~~~v~G~~VdL~~It~pvy~~a 337 (445)
T COG3243 262 ND-LIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIR---GGLEVSGTMVDLGDITCPVYNLA 337 (445)
T ss_pred cc-cchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhc---cceEECCEEechhhcccceEEEe
Confidence 00 000111111111111 1222222223222221110000 11111223367889999999999
Q ss_pred eCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccCh-HH--------HHHHHHHHHhhccccc
Q 022253 239 GENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERP-FV--------YNRQLKTILASLVHAN 296 (300)
Q Consensus 239 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~--------~~~~i~~fl~~~~~~~ 296 (300)
|++|.++|.+......+.+++.++++... +||....-+| .. .-.....|+.+....+
T Consensus 338 ~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~~~ 403 (445)
T COG3243 338 AEEDHIAPWSSVYLGARLLGGEVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKEHP 403 (445)
T ss_pred ecccccCCHHHHHHHHHhcCCceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhhccCC
Confidence 99999999999999998888446666665 8998655332 11 2235667776554433
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.55 E-value=3e-13 Score=99.65 Aligned_cols=181 Identities=21% Similarity=0.204 Sum_probs=113.7
Q ss_pred EEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH-Hh----
Q 022253 36 IWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR-KL---- 109 (300)
Q Consensus 36 ~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~-~~---- 109 (300)
.+.+...+.-|++||+||+..... .|..++++++.+ |-|+++|+...+............+.++.+.+=++ .+
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s-~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINS-WYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHH-HHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccc
Confidence 344544457899999999997777 899999999999 99999997654331111111111111111111111 11
Q ss_pred --CCcceEEEEEehhHHHHHHHHHhC-----cccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHH
Q 022253 110 --GVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQF 182 (300)
Q Consensus 110 --~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (300)
+..++.|.|||.||-+|..++..+ +.+++++++++|.-.........
T Consensus 87 ~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~-------------------------- 140 (259)
T PF12740_consen 87 KPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTE-------------------------- 140 (259)
T ss_pred cccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCC--------------------------
Confidence 345899999999999999999887 45899999999986321110000
Q ss_pred HHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCc---------ccCH-HHHHH
Q 022253 183 DIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDK---------IFDM-QVARN 252 (300)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~---------~~~~-~~~~~ 252 (300)
+ .. ......--+...|+++|..+-+. ..|. ...++
T Consensus 141 ----------P-~v------------------------~~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~ 185 (259)
T PF12740_consen 141 ----------P-PV------------------------LTYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYRE 185 (259)
T ss_pred ----------C-cc------------------------ccCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHH
Confidence 0 00 00001112355899999777664 2232 25577
Q ss_pred HHHHhCCCceEEEEcCCCCcccccCh
Q 022253 253 LKEQVGQNATMESIEKAGHLVNLERP 278 (300)
Q Consensus 253 ~~~~~~~~~~~~~~~~~gH~~~~~~~ 278 (300)
+++.....+-..+..+.||+-+++..
T Consensus 186 Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 186 FFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred HHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 77777656667777889999888655
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.55 E-value=6.1e-14 Score=118.82 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=83.6
Q ss_pred eecCCCeEEEEEccCCC--------CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCC-------
Q 022253 26 IEIEPGTILNIWVPKKT--------TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTD------- 89 (300)
Q Consensus 26 i~~~~g~~l~~~~~~~~--------~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~------- 89 (300)
+..++|.++.|...+.. .+.|+|||+||++++.. .|..+++.|.++ |+|+++|+||||.|...
T Consensus 422 ~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 422 LTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 44457777776554321 23468999999999999 999999999876 99999999999999443
Q ss_pred --C-C-------------CCChHHHHHHHHHHHHHhC----------------CcceEEEEEehhHHHHHHHHHh
Q 022253 90 --R-P-------------DRTASFQAECMAKGLRKLG----------------VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 90 --~-~-------------~~~~~~~~~~~~~~i~~~~----------------~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
. . ...+++.+.|+..+...++ ..+++++||||||.++..++..
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 1 1267888899998888776 2489999999999999999875
No 111
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.54 E-value=6.9e-13 Score=123.59 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=88.0
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-cceEEEEEehh
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYG 122 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~lvG~S~G 122 (300)
++++++|+||++++.. .|..+.+.|..++.|+++|.+|+|.+. ....+++.+++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 4578999999999999 999999999888999999999998653 3457999999999999988754 48999999999
Q ss_pred HHHHHHHHHh---CcccccceEEEcccC
Q 022253 123 GMVGFKMAEM---YPDLVESMVVTCSVM 147 (300)
Q Consensus 123 g~~a~~~a~~---~p~~v~~~vl~~~~~ 147 (300)
|.+|..+|.+ .++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999985 467899999998754
No 112
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.53 E-value=3.2e-12 Score=98.36 Aligned_cols=120 Identities=19% Similarity=0.220 Sum_probs=82.1
Q ss_pred CCeEEEE--Ecc--CCCCCCceEEEEcCCCCCchhhHHHH---HH------hhhcC-ceEEeecCCCCCCCCCCCCCCCh
Q 022253 30 PGTILNI--WVP--KKTTKKHAVVLLHPFGFDGILTWQFQ---VL------ALAKT-YEVYVPDFLFFGSSVTDRPDRTA 95 (300)
Q Consensus 30 ~g~~l~~--~~~--~~~~~~~~vv~lhG~~~~~~~~~~~~---~~------~l~~~-~~v~~~d~~G~G~s~~~~~~~~~ 95 (300)
||++|.. +.+ ...++-|+||..|+++.......... .. .|.++ |.|+..|.||.|.|+...... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-S 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-S
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-C
Confidence 6888874 556 44456789999999996542011111 11 26666 999999999999999766443 4
Q ss_pred HHHHHHHHHHHHHhC-----CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCC
Q 022253 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (300)
..-++|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+.....
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 556778888887772 2489999999999999999998888899999988766543
No 113
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.52 E-value=5.9e-12 Score=96.07 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=129.7
Q ss_pred CCCceEEEEcCCCCCchhhHHH-H-HHhhhcC-ceEEeecCCCCCCCCCCCCC----CChHHH-------H---HHHHHH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQF-Q-VLALAKT-YEVYVPDFLFFGSSVTDRPD----RTASFQ-------A---ECMAKG 105 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~-~-~~~l~~~-~~v~~~d~~G~G~s~~~~~~----~~~~~~-------~---~~~~~~ 105 (300)
+.+|.+|.++|.|++.. ..+. + +..|.++ +..+.+..|-||.-.+.... .+..++ + ..+..+
T Consensus 90 ~~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 46889999999998765 3332 2 4555555 99999999999876543321 222222 1 233444
Q ss_pred HHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHh
Q 022253 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIA 185 (300)
Q Consensus 106 i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (300)
++..|..++.+.|.||||.+|...|...|..+..+-++++...........+.....+..+...+........ ....
T Consensus 169 l~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~---~~~~ 245 (348)
T PF09752_consen 169 LEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEE---ISDI 245 (348)
T ss_pred HHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhh---hccc
Confidence 4555888999999999999999999999987776666665433211111111111111111111000000000 0000
Q ss_pred hccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhc---ccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCce
Q 022253 186 CYKLPTLPAFVYKHILEALSDHRKERIELLQALVIS---DKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNAT 262 (300)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 262 (300)
..... .... ...... ................ -.....+.-...+.++.+++|.++|......+.+.+| +++
T Consensus 246 ~~~~~--~~~~--~~~~~~-~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP-GsE 319 (348)
T PF09752_consen 246 PAQNK--SLPL--DSMEER-RRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP-GSE 319 (348)
T ss_pred ccCcc--cccc--hhhccc-cchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC-CCe
Confidence 00000 0000 000000 0000001111111000 0011122223348999999999999999999999998 999
Q ss_pred EEEEcCCCCcc-cccChHHHHHHHHHHHh
Q 022253 263 MESIEKAGHLV-NLERPFVYNRQLKTILA 290 (300)
Q Consensus 263 ~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 290 (300)
+..+++ ||.- ++-+.+.+.+.|.+-++
T Consensus 320 vR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 320 VRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred EEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 999985 9974 45677889888887664
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.50 E-value=5.3e-13 Score=99.03 Aligned_cols=94 Identities=22% Similarity=0.240 Sum_probs=63.5
Q ss_pred EEEEcCCCCC---chhhHHHHHHhhhc-C-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---------CCcc
Q 022253 48 VVLLHPFGFD---GILTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---------GVEK 113 (300)
Q Consensus 48 vv~lhG~~~~---~~~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~---------~~~~ 113 (300)
||++||.+-. .. ....++..+++ . +.|+.+|+|=. +........+|+.+.++.+ +.++
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 7999998743 33 45556666665 4 99999999932 2234455566666555543 3458
Q ss_pred eEEEEEehhHHHHHHHHHhCcc----cccceEEEcccCCC
Q 022253 114 CTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGL 149 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~ 149 (300)
++++|+|.||.+++.++....+ .++++++++|....
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999999975443 38999999997644
No 115
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.49 E-value=6e-12 Score=108.73 Aligned_cols=219 Identities=10% Similarity=-0.009 Sum_probs=123.7
Q ss_pred HHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--------------------CcceEEEEEehhH
Q 022253 65 QVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--------------------VEKCTLVGVSYGG 123 (300)
Q Consensus 65 ~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~--------------------~~~~~lvG~S~Gg 123 (300)
+.+.|.++ |.|+..|.||+|.|++...... ..-.+|..++|+.+. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 34667777 9999999999999998653333 334677777777774 3689999999999
Q ss_pred HHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHH-hhccCCC-ChHHHHHHHH
Q 022253 124 MVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDI-ACYKLPT-LPAFVYKHIL 201 (300)
Q Consensus 124 ~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 201 (300)
.+++.+|...|+.++++|..++........ ...+...............+...... ....... .........+
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~y-----r~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYY-----RENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHh-----hcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHH
Confidence 999999998888899999887765421110 00000000000000001101110000 0000000 0001111111
Q ss_pred HHHh----cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCccc
Q 022253 202 EALS----DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVN 274 (300)
Q Consensus 202 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~ 274 (300)
.... ........+ +...+....+.++++|+|+|+|..|..++.+.+..+.+.+. ...++.+.+ ++|...
T Consensus 425 ~~~~~~~~~~~~~y~~f---W~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~ 500 (767)
T PRK05371 425 AELTAAQDRKTGDYNDF---WDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYP 500 (767)
T ss_pred hhhhhhhhhcCCCccHH---HHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCC
Confidence 1000 000000011 11122224567899999999999999999888777777664 245665555 688644
Q ss_pred c-cChHHHHHHHHHHHhhcc
Q 022253 275 L-ERPFVYNRQLKTILASLV 293 (300)
Q Consensus 275 ~-~~~~~~~~~i~~fl~~~~ 293 (300)
. ..+.++.+.+.+|+....
T Consensus 501 ~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 501 NNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred CchhHHHHHHHHHHHHHhcc
Confidence 3 345677888888887654
No 116
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.47 E-value=1.3e-12 Score=92.17 Aligned_cols=178 Identities=17% Similarity=0.188 Sum_probs=123.0
Q ss_pred cCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCC--CCC-CC-------CCCChHHHHHHHHHHHH
Q 022253 39 PKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGS--SVT-DR-------PDRTASFQAECMAKGLR 107 (300)
Q Consensus 39 ~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~--s~~-~~-------~~~~~~~~~~~~~~~i~ 107 (300)
.|...++..||.+--+.+...+.-+..+..++.+ |.|+.+|+.. |. |.. .. ...+....-.++..+++
T Consensus 33 ~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k 111 (242)
T KOG3043|consen 33 VGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVK 111 (242)
T ss_pred ecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchhHHHHHHH
Confidence 3433344677777776665552467788899888 9999999752 31 111 10 11333334456666666
Q ss_pred Hh---C-CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHH
Q 022253 108 KL---G-VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFD 183 (300)
Q Consensus 108 ~~---~-~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (300)
.+ + ..++.++|.||||.++..+....| .+.+++.+-|....
T Consensus 112 ~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d---------------------------------- 156 (242)
T KOG3043|consen 112 WLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD---------------------------------- 156 (242)
T ss_pred HHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC----------------------------------
Confidence 55 4 568999999999999998888887 57777776654321
Q ss_pred HhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCC---
Q 022253 184 IACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQN--- 260 (300)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 260 (300)
...+..+++|++++.|+.|.++|++....+.+.+..+
T Consensus 157 ----------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~ 196 (242)
T KOG3043|consen 157 ----------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAV 196 (242)
T ss_pred ----------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccc
Confidence 0134567899999999999999999888888887633
Q ss_pred -ceEEEEcCCCCcccc-----cCh------HHHHHHHHHHHhhc
Q 022253 261 -ATMESIEKAGHLVNL-----ERP------FVYNRQLKTILASL 292 (300)
Q Consensus 261 -~~~~~~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 292 (300)
.++.+++|.+|.++. +.| |+..+.+.+|+++.
T Consensus 197 ~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 197 GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 369999999998763 344 34566677777654
No 117
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.46 E-value=3e-11 Score=86.58 Aligned_cols=252 Identities=12% Similarity=0.031 Sum_probs=150.3
Q ss_pred EEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC----ceEEeecCCCCCCCC---CC------CCCCChHHHHH
Q 022253 34 LNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT----YEVYVPDFLFFGSSV---TD------RPDRTASFQAE 100 (300)
Q Consensus 34 l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~G~G~s~---~~------~~~~~~~~~~~ 100 (300)
+.++.......++.+++++|.+|... .|..++..|.+. +.++.+...||-.-+ .. .+.++.+++++
T Consensus 18 ~~~~v~~~~~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~ 96 (301)
T KOG3975|consen 18 LKPWVTKSGEDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVD 96 (301)
T ss_pred eeeeeccCCCCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHH
Confidence 33444433357889999999999999 999998877654 458998888886443 11 13478888888
Q ss_pred HHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcc--cccceEEEcccCCC-Cccchhhhh----hccc-hhhhhhc-
Q 022253 101 CMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGL-TESVSNAAL----ERIG-YESWVDF- 169 (300)
Q Consensus 101 ~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~-~~~~~~~~~----~~~~-~~~~~~~- 169 (300)
.-.++++.. ...+++++|||.|+++.+........ .|.+++++-|..-. ..+.....+ ..+. .......
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi 176 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYI 176 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeee
Confidence 888888877 34589999999999999998874322 47777777665421 111100000 0000 0000000
Q ss_pred cCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHh----cch--hhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCc
Q 022253 170 LLPKTADALKVQFDIACYKLPTLPAFVYKHILEALS----DHR--KERIELLQALVISDKEFSIPHFSQKIHLLWGENDK 243 (300)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~ 243 (300)
+........+.++-.........+.++....+.-.- .+. -+..++..-.. .....+.+-.+-+.+.+|..|.
T Consensus 177 ~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~--~d~e~~een~d~l~Fyygt~Dg 254 (301)
T KOG3975|consen 177 YWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT--RDIEYCEENLDSLWFYYGTNDG 254 (301)
T ss_pred eeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH--hHHHHHHhcCcEEEEEccCCCC
Confidence 112223334444444444444444444422211110 000 00001110000 0111222334568999999999
Q ss_pred ccCHHHHHHHHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHH
Q 022253 244 IFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTIL 289 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 289 (300)
.+|.+....+.+.++ .+.++.+ ++..|.+...+.+..+..+.+.+
T Consensus 255 W~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 255 WVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999999998 3456666 77999999988888888887765
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.44 E-value=3.1e-11 Score=90.07 Aligned_cols=202 Identities=17% Similarity=0.184 Sum_probs=117.8
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhh-cC---ceEEee--cCCCC----CC----CCCCC-------CC-CChHHHHHH
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALA-KT---YEVYVP--DFLFF----GS----SVTDR-------PD-RTASFQAEC 101 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~-~~---~~v~~~--d~~G~----G~----s~~~~-------~~-~~~~~~~~~ 101 (300)
...|.||+||++++.. .+..++..+. +. -.++.+ +--|. |. ...|- .. .+....++.
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 5679999999999999 9999999997 43 334333 33332 21 11111 11 356677888
Q ss_pred HHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcc-----cccceEEEcccCCCCccchhhhhhccchhhhhhccCc
Q 022253 102 MAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLP 172 (300)
Q Consensus 102 ~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (300)
+..++..| +.+++.+|||||||..++.|+..+.. ++..+|.++++............. . .+..
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~-------~-~~~~ 160 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ-------N-DLNK 160 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT-------T--CST
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh-------h-hhcc
Confidence 88888777 67899999999999999999987532 489999999876543211100000 0 0000
Q ss_pred ccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeC------CCcccC
Q 022253 173 KTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGE------NDKIFD 246 (300)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~------~D~~~~ 246 (300)
..+......+++++.. . +..++ -++.+|-|.|. .|..||
T Consensus 161 ---------------~gp~~~~~~y~~l~~~--------------~-----~~~~p-~~i~VLnI~G~~~~g~~sDG~V~ 205 (255)
T PF06028_consen 161 ---------------NGPKSMTPMYQDLLKN--------------R-----RKNFP-KNIQVLNIYGDLEDGSNSDGIVP 205 (255)
T ss_dssp ---------------T-BSS--HHHHHHHHT--------------H-----GGGST-TT-EEEEEEEESBTTCSBTSSSB
T ss_pred ---------------cCCcccCHHHHHHHHH--------------H-----HhhCC-CCeEEEEEecccCCCCCCCeEEe
Confidence 0000001111111110 0 01111 24569999998 899999
Q ss_pred HHHHHHHHHHhCC---CceEEEEcC--CCCcccccChHHHHHHHHHHHh
Q 022253 247 MQVARNLKEQVGQ---NATMESIEK--AGHLVNLERPFVYNRQLKTILA 290 (300)
Q Consensus 247 ~~~~~~~~~~~~~---~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~ 290 (300)
...+..+...+.+ ..+-.++.| +.|.-..+++ ++.+.|.+||=
T Consensus 206 ~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 206 NASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp HHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 9988888877763 234555654 6898777766 58899999983
No 119
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.43 E-value=7.2e-11 Score=91.41 Aligned_cols=232 Identities=12% Similarity=0.090 Sum_probs=131.9
Q ss_pred CCeEEEEEccCCC---CCCceEEEEcCCCC-----CchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHH
Q 022253 30 PGTILNIWVPKKT---TKKHAVVLLHPFGF-----DGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQA 99 (300)
Q Consensus 30 ~g~~l~~~~~~~~---~~~~~vv~lhG~~~-----~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~ 99 (300)
++..++.+.+... ...|.||++||+|. ... .|..+...+++. ..|+++|+|=--+... ...+++..
T Consensus 72 ~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~-~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~---Pa~y~D~~ 147 (336)
T KOG1515|consen 72 TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSP-AYDSFCTRLAAELNCVVVSVDYRLAPEHPF---PAAYDDGW 147 (336)
T ss_pred CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCc-hhHHHHHHHHHHcCeEEEecCcccCCCCCC---CccchHHH
Confidence 5667777766542 35789999999873 244 788888888776 8899999994333322 23455555
Q ss_pred HHHHHHHHH------hCCcceEEEEEehhHHHHHHHHHhC------cccccceEEEcccCCCCccchhhhhhccchhhhh
Q 022253 100 ECMAKGLRK------LGVEKCTLVGVSYGGMVGFKMAEMY------PDLVESMVVTCSVMGLTESVSNAALERIGYESWV 167 (300)
Q Consensus 100 ~~~~~~i~~------~~~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (300)
+.+..+.++ .+.++++|.|-|.||.+|..+|.+. +-++++.|++-|...................
T Consensus 148 ~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~--- 224 (336)
T KOG1515|consen 148 AALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS--- 224 (336)
T ss_pred HHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC---
Confidence 555555553 2556899999999999999888653 3479999999998765443332211111000
Q ss_pred hccCcccHHHHHHHHHHhhccCC-CChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcc-eEEEEeeCCCccc
Q 022253 168 DFLLPKTADALKVQFDIACYKLP-TLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQ-KIHLLWGENDKIF 245 (300)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-P~l~i~g~~D~~~ 245 (300)
.................... ..+.. +...... .......-..+ |++++.++.|.+.
T Consensus 225 ---~~~~~~~~~~~w~~~lP~~~~~~~~p------------------~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~ 282 (336)
T KOG1515|consen 225 ---PELARPKIDKWWRLLLPNGKTDLDHP------------------FINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLR 282 (336)
T ss_pred ---cchhHHHHHHHHHHhCCCCCCCcCCc------------------ccccccc-ccccCccccCCCceEEEEeCchhhh
Confidence 00011111111111110100 00000 0000000 00012222334 4999999999886
Q ss_pred CHHHHHHHHHHhC---CCceEEEEcCCCCcccccCh-----HHHHHHHHHHHhhc
Q 022253 246 DMQVARNLKEQVG---QNATMESIEKAGHLVNLERP-----FVYNRQLKTILASL 292 (300)
Q Consensus 246 ~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 292 (300)
. ....+++++. -.+++..++++.|.++.-.+ .++.+.+.+|+++.
T Consensus 283 D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 283 D--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred h--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 4 3334444433 24567789999998776433 46777888888753
No 120
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.5e-11 Score=86.86 Aligned_cols=178 Identities=20% Similarity=0.218 Sum_probs=115.7
Q ss_pred CCceEEEEcCCCCCchhhHHHH----HHhhhcCceEEeecCCC------CCCCCC-------C-----------------
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQ----VLALAKTYEVYVPDFLF------FGSSVT-------D----------------- 89 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~----~~~l~~~~~v~~~d~~G------~G~s~~-------~----------------- 89 (300)
.++-||||||+-.+.. .|..- ...|.+.+..+.+|-|- .-.+.. +
T Consensus 4 ~k~rvLcLHGfrQsg~-~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGK-VFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccH-HHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 5678999999999888 77543 23343447777777651 101110 0
Q ss_pred CCCCChHHHHHHHHHHHHHhCCcce-EEEEEehhHHHHHHHHHhCc------c--cccceEEEcccCCCCccchhhhhhc
Q 022253 90 RPDRTASFQAECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYP------D--LVESMVVTCSVMGLTESVSNAALER 160 (300)
Q Consensus 90 ~~~~~~~~~~~~~~~~i~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p------~--~v~~~vl~~~~~~~~~~~~~~~~~~ 160 (300)
......+...+.+.+.+++.| |+ .|+|.|.|+.++..++.... + .++-+|++++........
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~------- 153 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL------- 153 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh-------
Confidence 001223444556666666654 43 58999999999998887211 1 256677777654311000
Q ss_pred cchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeC
Q 022253 161 IGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGE 240 (300)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~ 240 (300)
+.....+.+++|.|.|.|+
T Consensus 154 -------------------------------------------------------------~~~~~~~~i~~PSLHi~G~ 172 (230)
T KOG2551|consen 154 -------------------------------------------------------------DESAYKRPLSTPSLHIFGE 172 (230)
T ss_pred -------------------------------------------------------------hhhhhccCCCCCeeEEecc
Confidence 0001335789999999999
Q ss_pred CCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhccccc
Q 022253 241 NDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVHAN 296 (300)
Q Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~~ 296 (300)
.|.+++...+..+++.+. +..+...+ +||++... ..+.+.|.+|++....+.
T Consensus 173 ~D~iv~~~~s~~L~~~~~-~a~vl~Hp-ggH~VP~~--~~~~~~i~~fi~~~~~~~ 224 (230)
T KOG2551|consen 173 TDTIVPSERSEQLAESFK-DATVLEHP-GGHIVPNK--AKYKEKIADFIQSFLQEE 224 (230)
T ss_pred cceeecchHHHHHHHhcC-CCeEEecC-CCccCCCc--hHHHHHHHHHHHHHHHhh
Confidence 999999999999999998 77777676 69998754 367777777777665443
No 121
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.43 E-value=2.8e-11 Score=89.98 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=86.0
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CcceEEEEEehhHH
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGM 124 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S~Gg~ 124 (300)
|+++|+|+.+|... .|..+...|.....|+.++.||.|.- .....+++++++...+.|.... ..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 58999999999999 99999999999899999999999862 2345788999988888887774 45999999999999
Q ss_pred HHHHHHHhC---cccccceEEEcccCC
Q 022253 125 VGFKMAEMY---PDLVESMVVTCSVMG 148 (300)
Q Consensus 125 ~a~~~a~~~---p~~v~~~vl~~~~~~ 148 (300)
+|..+|.+- .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999753 446999999999877
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.43 E-value=3.6e-12 Score=93.87 Aligned_cols=161 Identities=17% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCceEEEEcCCCCCchhhHHHHH----Hhhhc-CceEEeecCCC-----CCCCC------------CCC-----------
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQV----LALAK-TYEVYVPDFLF-----FGSSV------------TDR----------- 90 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~----~~l~~-~~~v~~~d~~G-----~G~s~------------~~~----------- 90 (300)
.++-||||||++.++. .++... ..|.+ .+..+.+|-|- -|-.. .+.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 5788999999999999 887654 55666 57777777441 11110 000
Q ss_pred CCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCc--------ccccceEEEcccCCCCccchhhhhhccc
Q 022253 91 PDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP--------DLVESMVVTCSVMGLTESVSNAALERIG 162 (300)
Q Consensus 91 ~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--------~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (300)
....+++..+.+.+.++..+. =..|+|+|.||.+|..++.... ..++-+|++++........
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--------- 151 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--------- 151 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G---------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh---------
Confidence 012345555666666666552 3579999999999998886421 2367788888765421110
Q ss_pred hhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCC
Q 022253 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 242 (300)
.....-.+|++|+|.|+|.+|
T Consensus 152 -----------------------------------------------------------~~~~~~~~i~iPtlHv~G~~D 172 (212)
T PF03959_consen 152 -----------------------------------------------------------QELYDEPKISIPTLHVIGEND 172 (212)
T ss_dssp -----------------------------------------------------------TTTT--TT---EEEEEEETT-
T ss_pred -----------------------------------------------------------hhhhccccCCCCeEEEEeCCC
Confidence 000023567999999999999
Q ss_pred cccCHHHHHHHHHHhCCC-ceEEEEcCCCCccccc
Q 022253 243 KIFDMQVARNLKEQVGQN-ATMESIEKAGHLVNLE 276 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~ 276 (300)
.+++++.++.+.+... + .+++..+ +||.+...
T Consensus 173 ~~~~~~~s~~L~~~~~-~~~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 173 PVVPPERSEALAEMFD-PDARVIEHD-GGHHVPRK 205 (212)
T ss_dssp SSS-HHHHHHHHHHHH-HHEEEEEES-SSSS----
T ss_pred CCcchHHHHHHHHhcc-CCcEEEEEC-CCCcCcCC
Confidence 9999999999999887 5 7777776 69987754
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=8e-12 Score=90.36 Aligned_cols=114 Identities=20% Similarity=0.284 Sum_probs=79.8
Q ss_pred eEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCC---ChHHHHHHHHHHHH
Q 022253 32 TILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDR---TASFQAECMAKGLR 107 (300)
Q Consensus 32 ~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~~~~~i~ 107 (300)
..+....+...+.-|.|+|+||+.-... .|..++.+++.+ |-|+++++-..-. +.... +....++++..-++
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~ns-~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~ 108 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLYNS-FYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQ 108 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhhhH-HHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhh
Confidence 3444555555567899999999999888 999999999999 9999999874211 11111 11222223333222
Q ss_pred Hh-------CCcceEEEEEehhHHHHHHHHHhCc--ccccceEEEcccCCC
Q 022253 108 KL-------GVEKCTLVGVSYGGMVGFKMAEMYP--DLVESMVVTCSVMGL 149 (300)
Q Consensus 108 ~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 149 (300)
.+ +..++.++|||.||-.|..+|..+. -++.++|-++|....
T Consensus 109 ~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 109 HVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred hhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 22 3458999999999999999998763 258899999987653
No 124
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.39 E-value=6.4e-11 Score=93.21 Aligned_cols=115 Identities=21% Similarity=0.196 Sum_probs=72.5
Q ss_pred eEEEEEcc--CCCCCCceEEEEcCCCC---CchhhHHHHHHhhhc-C-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHH
Q 022253 32 TILNIWVP--KKTTKKHAVVLLHPFGF---DGILTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAK 104 (300)
Q Consensus 32 ~~l~~~~~--~~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 104 (300)
..+..+.+ ......|+||++||.+- +.. .....+..+.. . +.|+++|+|---+-.. ...+++..+.+..
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~---p~~~~d~~~a~~~ 139 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPEHPF---PAALEDAYAAYRW 139 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCCCCC---CchHHHHHHHHHH
Confidence 55566665 22345899999999874 333 44344544444 4 9999999994322211 1223332222223
Q ss_pred HHHH---hC--CcceEEEEEehhHHHHHHHHHhCcc----cccceEEEcccCCCC
Q 022253 105 GLRK---LG--VEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMGLT 150 (300)
Q Consensus 105 ~i~~---~~--~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~~~ 150 (300)
+.++ ++ .+++.+.|+|.||.+++.++..-.+ ...+.+++.|.....
T Consensus 140 l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 140 LRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred HHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 3322 22 4689999999999999999876543 468888999886644
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.38 E-value=7.6e-12 Score=86.88 Aligned_cols=186 Identities=15% Similarity=0.135 Sum_probs=113.0
Q ss_pred EEccCCCCCCceEEEEcCCC---CCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH----
Q 022253 36 IWVPKKTTKKHAVVLLHPFG---FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK---- 108 (300)
Q Consensus 36 ~~~~~~~~~~~~vv~lhG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~---- 108 (300)
.-.+++....+..||+||.- ++...+....-..+...|+|..+++ +.+. ...+.+....+....++.
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~---q~htL~qt~~~~~~gv~filk~ 131 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCP---QVHTLEQTMTQFTHGVNFILKY 131 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCc---ccccHHHHHHHHHHHHHHHHHh
Confidence 33455556789999999953 2222133333344444499998864 4433 334555555554444443
Q ss_pred h-CCcceEEEEEehhHHHHHHHHHh-CcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhh
Q 022253 109 L-GVEKCTLVGVSYGGMVGFKMAEM-YPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIAC 186 (300)
Q Consensus 109 ~-~~~~~~lvG~S~Gg~~a~~~a~~-~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (300)
. ..+++.+-|||.|+.+|..+..+ +..+|.++++.++...............++
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlg------------------------ 187 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLG------------------------ 187 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccC------------------------
Confidence 3 33457778999999999987765 344799999988875422111100000000
Q ss_pred ccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEE
Q 022253 187 YKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESI 266 (300)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
...+. .+.. ......+..++.|++++.|+.|.---.++.+.+.+.+. .+++..+
T Consensus 188 -----Lt~~~----ae~~----------------Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-~a~~~~f 241 (270)
T KOG4627|consen 188 -----LTERN----AESV----------------SCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-KASFTLF 241 (270)
T ss_pred -----cccch----hhhc----------------CccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-hcceeec
Confidence 00000 0000 00012446688899999999998666788899999887 8999999
Q ss_pred cCCCCcccccC
Q 022253 267 EKAGHLVNLER 277 (300)
Q Consensus 267 ~~~gH~~~~~~ 277 (300)
++.+|+-.+++
T Consensus 242 ~n~~hy~I~~~ 252 (270)
T KOG4627|consen 242 KNYDHYDIIEE 252 (270)
T ss_pred CCcchhhHHHH
Confidence 99999977653
No 126
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.38 E-value=1.8e-10 Score=94.30 Aligned_cols=125 Identities=16% Similarity=0.059 Sum_probs=87.1
Q ss_pred ceeecCC---CeEEEEEccC---CCCCCceEEEEcCCCCCchhhHHHHHH------------------hhhcCceEEeec
Q 022253 24 RTIEIEP---GTILNIWVPK---KTTKKHAVVLLHPFGFDGILTWQFQVL------------------ALAKTYEVYVPD 79 (300)
Q Consensus 24 ~~i~~~~---g~~l~~~~~~---~~~~~~~vv~lhG~~~~~~~~~~~~~~------------------~l~~~~~v~~~d 79 (300)
.++.+.+ +..++||... .+.+.|.||+++|.++.+. .+..+.+ .+.+..+++.+|
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iD 128 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVD 128 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccccCeEEEe
Confidence 4455532 5678776554 2356799999999998876 5533210 123347899999
Q ss_pred CC-CCCCCCCCCC--CCChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHhC----------cccccc
Q 022253 80 FL-FFGSSVTDRP--DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----------PDLVES 139 (300)
Q Consensus 80 ~~-G~G~s~~~~~--~~~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~ 139 (300)
.| |+|.|..... ..+.++.++|+.++++.. +..+++|+|||+||.++..+|.+. +-.+++
T Consensus 129 qP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkG 208 (462)
T PTZ00472 129 QPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAG 208 (462)
T ss_pred CCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEE
Confidence 75 8888865432 345577889998888753 457899999999999988887652 113788
Q ss_pred eEEEcccCCC
Q 022253 140 MVVTCSVMGL 149 (300)
Q Consensus 140 ~vl~~~~~~~ 149 (300)
+++.++....
T Consensus 209 i~IGNg~~dp 218 (462)
T PTZ00472 209 LAVGNGLTDP 218 (462)
T ss_pred EEEeccccCh
Confidence 9888887643
No 127
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.36 E-value=1.1e-11 Score=91.56 Aligned_cols=103 Identities=19% Similarity=0.142 Sum_probs=71.5
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhc---------CceEEeecCCCCCCCCCCCCCCChHH----HHHHHHHHHHHh-
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAK---------TYEVYVPDFLFFGSSVTDRPDRTASF----QAECMAKGLRKL- 109 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~---------~~~v~~~d~~G~G~s~~~~~~~~~~~----~~~~~~~~i~~~- 109 (300)
++.+|||+||.+++.. .++.+...+.+ .++++++|+......-. ...+.+ ..+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~---g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH---GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccc---cccHHHHHHHHHHHHHHHHHhhh
Confidence 5789999999999988 88887755521 27899999875432211 122222 333444444444
Q ss_pred ----CCcceEEEEEehhHHHHHHHHHhCc---ccccceEEEcccCCCC
Q 022253 110 ----GVEKCTLVGVSYGGMVGFKMAEMYP---DLVESMVVTCSVMGLT 150 (300)
Q Consensus 110 ----~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~~vl~~~~~~~~ 150 (300)
+.+++++|||||||.+|-.++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 4578999999999999988876543 4799999999876543
No 128
>PRK04940 hypothetical protein; Provisional
Probab=99.34 E-value=4.8e-10 Score=78.14 Aligned_cols=169 Identities=11% Similarity=0.098 Sum_probs=97.9
Q ss_pred EEEEcCCCCCchhh--HHHH-HHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC----CcceEEEEEe
Q 022253 48 VVLLHPFGFDGILT--WQFQ-VLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG----VEKCTLVGVS 120 (300)
Q Consensus 48 vv~lhG~~~~~~~~--~~~~-~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~lvG~S 120 (300)
|+++||+.+++. + .... ...+..+.+++ +++ ...+....+.+.+.+..+. .+++.|||.|
T Consensus 2 IlYlHGF~SS~~-S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSP-GNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCC-ccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 799999999988 5 3211 11221113332 221 1234444555555555421 1579999999
Q ss_pred hhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHH
Q 022253 121 YGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHI 200 (300)
Q Consensus 121 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (300)
+||+.|..+|.++. -..|+++|...+........ + ...... .+....
T Consensus 69 LGGyyA~~La~~~g---~~aVLiNPAv~P~~~L~~~i----g-------------------------~~~~y~-~~~~~h 115 (180)
T PRK04940 69 LGGYWAERIGFLCG---IRQVIFNPNLFPEENMEGKI----D-------------------------RPEEYA-DIATKC 115 (180)
T ss_pred hHHHHHHHHHHHHC---CCEEEECCCCChHHHHHHHh----C-------------------------CCcchh-hhhHHH
Confidence 99999999999986 36788999876422111000 0 000000 111111
Q ss_pred HHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCc-eEEEEcCCCCcccccChH
Q 022253 201 LEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNA-TMESIEKAGHLVNLERPF 279 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~ 279 (300)
+... . .+-.-..+++..+.|.+.+...+.... . ++ ++.+.+|++|-+ ++-+
T Consensus 116 ~~eL--------------~--------~~~p~r~~vllq~gDEvLDyr~a~~~y---~-~~y~~~v~~GGdH~f--~~fe 167 (180)
T PRK04940 116 VTNF--------------R--------EKNRDRCLVILSRNDEVLDSQRTAEEL---H-PYYEIVWDEEQTHKF--KNIS 167 (180)
T ss_pred HHHh--------------h--------hcCcccEEEEEeCCCcccCHHHHHHHh---c-cCceEEEECCCCCCC--CCHH
Confidence 1111 0 011223689999999999876665543 3 45 788889888865 4567
Q ss_pred HHHHHHHHHHh
Q 022253 280 VYNRQLKTILA 290 (300)
Q Consensus 280 ~~~~~i~~fl~ 290 (300)
+....|.+|++
T Consensus 168 ~~l~~I~~F~~ 178 (180)
T PRK04940 168 PHLQRIKAFKT 178 (180)
T ss_pred HHHHHHHHHHh
Confidence 78888999985
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.34 E-value=2.8e-10 Score=83.07 Aligned_cols=104 Identities=24% Similarity=0.249 Sum_probs=69.3
Q ss_pred CCceEEEEcCCCCCchhhHHHH--HHhhhcC--ceEEeecCCCCCCCCCC---------CCCCChHHHHHHHHHHHHHhC
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQ--VLALAKT--YEVYVPDFLFFGSSVTD---------RPDRTASFQAECMAKGLRKLG 110 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~G~G~s~~~---------~~~~~~~~~~~~~~~~i~~~~ 110 (300)
+.|.||++||.+++.. .+... ...|++. |-|+.++.......... ....+...+++.+..+.++.+
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4689999999999988 66543 3457666 78888875421111100 011122222333334444444
Q ss_pred --CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 111 --VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 111 --~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
..+|++.|+|.||.++..++..+|+.+.++...++.+.
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 45899999999999999999999999999888877654
No 130
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.2e-10 Score=100.63 Aligned_cols=226 Identities=19% Similarity=0.105 Sum_probs=143.5
Q ss_pred ccCcccceeecCCCeEEEEEccCC-----CCCCceEEEEcCCCCCch------hhHHHHHHhhhcC-ceEEeecCCCCCC
Q 022253 18 LVGMTQRTIEIEPGTILNIWVPKK-----TTKKHAVVLLHPFGFDGI------LTWQFQVLALAKT-YEVYVPDFLFFGS 85 (300)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~~-----~~~~~~vv~lhG~~~~~~------~~~~~~~~~l~~~-~~v~~~d~~G~G~ 85 (300)
.+..+..++.. ||....+...-+ .++-|.+|.+||.+++.. -.|... ..... +.|+.+|.||-|.
T Consensus 495 ~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 495 LPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGG 571 (755)
T ss_pred CCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCC
Confidence 44556667777 898887754332 234577888999986322 133333 33444 9999999999876
Q ss_pred CCCCC--------CCCChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCccc-ccceEEEcccCCCCccch
Q 022253 86 SVTDR--------PDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDL-VESMVVTCSVMGLTESVS 154 (300)
Q Consensus 86 s~~~~--------~~~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~-v~~~vl~~~~~~~~~~~~ 154 (300)
....- +....++....+..+++.. +.+++.+.|+|.||++++.++...|+. ++..+.++|.....-. .
T Consensus 572 ~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~y-d 650 (755)
T KOG2100|consen 572 YGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYY-D 650 (755)
T ss_pred cchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeee-c
Confidence 54331 2245555555566666554 445899999999999999999999854 5555999998764311 0
Q ss_pred hhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceE
Q 022253 155 NAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKI 234 (300)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 234 (300)
.....+. ...+......+ ........+..++.|.
T Consensus 651 s~~tery----------------------------mg~p~~~~~~y------------------~e~~~~~~~~~~~~~~ 684 (755)
T KOG2100|consen 651 STYTERY----------------------------MGLPSENDKGY------------------EESSVSSPANNIKTPK 684 (755)
T ss_pred ccccHhh----------------------------cCCCccccchh------------------hhccccchhhhhccCC
Confidence 0000000 00000000000 0111223344555565
Q ss_pred -EEEeeCCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCcccccCh-HHHHHHHHHHHhhcc
Q 022253 235 -HLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNLERP-FVYNRQLKTILASLV 293 (300)
Q Consensus 235 -l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~~ 293 (300)
|++||+.|..|..+.+..+.+.+. -..++.++|+.+|.+..-.. ..+...+..|+..+.
T Consensus 685 ~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 685 LLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred EEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 999999999999998888887775 13789999999999876443 567888888888544
No 131
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.28 E-value=2.3e-11 Score=89.49 Aligned_cols=150 Identities=18% Similarity=0.233 Sum_probs=68.8
Q ss_pred HHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccH
Q 022253 99 AECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTA 175 (300)
Q Consensus 99 ~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (300)
.+...++++.. +.+++.|+|.|.||-+|+.+|..+| .|+++|.++|.................+..+.. ..
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~-----~~ 79 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPF-----DI 79 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B------G
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCc-----Ch
Confidence 34444444443 2358999999999999999999999 699999999886543321111000000000000 00
Q ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHH-HHHHH
Q 022253 176 DALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQV-ARNLK 254 (300)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~ 254 (300)
..... ...... .... .......-........+.++++|+|+|.|++|...|... ++.+.
T Consensus 80 ~~~~~------~~~~~~-------------~~~~-~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~ 139 (213)
T PF08840_consen 80 SKFSW------NEPGLL-------------RSRY-AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIE 139 (213)
T ss_dssp GG-EE-------TTS-E-------------E-TT--B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHH
T ss_pred hhcee------cCCcce-------------ehhh-hhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHH
Confidence 00000 000000 0000 000000000111223567899999999999999998654 44555
Q ss_pred HHhC-----CCceEEEEcCCCCccc
Q 022253 255 EQVG-----QNATMESIEKAGHLVN 274 (300)
Q Consensus 255 ~~~~-----~~~~~~~~~~~gH~~~ 274 (300)
+++. .+.+++.++++||++.
T Consensus 140 ~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 140 ERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp HHHHCTT-----EEEEETTB-S---
T ss_pred HHHHHhCCCCcceEEEcCCCCceec
Confidence 5443 1468889999999853
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.25 E-value=1.2e-10 Score=92.81 Aligned_cols=104 Identities=16% Similarity=0.095 Sum_probs=60.0
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCC-CCC--C------C---------------CC-ChH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSS-VTD--R------P---------------DR-TAS 96 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s-~~~--~------~---------------~~-~~~ 96 (300)
++-|+|||-||++++.. .|..++..|+.+ |-|+++|.|..-.+ ... . . .. ..+
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 45789999999999999 999999999999 99999999943111 000 0 0 00 000
Q ss_pred ----------HHHHHHHHHHHHh--------------------------CCcceEEEEEehhHHHHHHHHHhCcccccce
Q 022253 97 ----------FQAECMAKGLRKL--------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (300)
Q Consensus 97 ----------~~~~~~~~~i~~~--------------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 140 (300)
.-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1123444444332 124789999999999999888776 579999
Q ss_pred EEEcccCC
Q 022253 141 VVTCSVMG 148 (300)
Q Consensus 141 vl~~~~~~ 148 (300)
|+++++..
T Consensus 256 I~LD~W~~ 263 (379)
T PF03403_consen 256 ILLDPWMF 263 (379)
T ss_dssp EEES---T
T ss_pred EEeCCccc
Confidence 99998753
No 133
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.25 E-value=1.7e-10 Score=80.46 Aligned_cols=97 Identities=25% Similarity=0.148 Sum_probs=75.9
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCcceEEEEEe
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVS 120 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~lvG~S 120 (300)
..+||+.|=++-.. .=..+++.|+++ +.|+.+|-+-+=.+ ..++++.+.|+..+++.. +.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~-~d~~~a~~l~~~G~~VvGvdsl~Yfw~-----~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRD-LDKQIAEALAKQGVPVVGVDSLRYFWS-----ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchh-hhHHHHHHHHHCCCeEEEechHHHHhh-----hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 46788888777655 556778999999 99999996644333 356788888888887665 67899999999
Q ss_pred hhHHHHHHHHHhCcc----cccceEEEcccCC
Q 022253 121 YGGMVGFKMAEMYPD----LVESMVVTCSVMG 148 (300)
Q Consensus 121 ~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~ 148 (300)
+|+-+.-....+.|. +|..++++++...
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999888877777664 6899999998754
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.24 E-value=9.6e-11 Score=90.53 Aligned_cols=129 Identities=26% Similarity=0.260 Sum_probs=72.7
Q ss_pred ccCcccceeec--CCCeEEE--EEccCC-CCCCceEEEEcCCCCCchh---h----------H----HHHHHhhhcC-ce
Q 022253 18 LVGMTQRTIEI--EPGTILN--IWVPKK-TTKKHAVVLLHPFGFDGIL---T----------W----QFQVLALAKT-YE 74 (300)
Q Consensus 18 ~~~~~~~~i~~--~~g~~l~--~~~~~~-~~~~~~vv~lhG~~~~~~~---~----------~----~~~~~~l~~~-~~ 74 (300)
..|++.+++.+ .++..+. +..+.. +++-|+||++||-++..+. . + ..+...|+++ |-
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 44555555443 3565554 244544 4567899999998765531 0 1 1246788998 99
Q ss_pred EEeecCCCCCCCCCCCCC-----CChHHH---------------HHHHHHHHHHhC------CcceEEEEEehhHHHHHH
Q 022253 75 VYVPDFLFFGSSVTDRPD-----RTASFQ---------------AECMAKGLRKLG------VEKCTLVGVSYGGMVGFK 128 (300)
Q Consensus 75 v~~~d~~G~G~s~~~~~~-----~~~~~~---------------~~~~~~~i~~~~------~~~~~lvG~S~Gg~~a~~ 128 (300)
|+++|.+|+|+....... ++...+ +-|...+++.+. .++|.++|+|+||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 999999999987654311 121222 123334555553 358999999999999999
Q ss_pred HHHhCcccccceEEEcccC
Q 022253 129 MAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 129 ~a~~~p~~v~~~vl~~~~~ 147 (300)
+|+.. ++|++.|..+...
T Consensus 243 LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 243 LAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHH--TT--EEEEES-B-
T ss_pred HHHcc-hhhHhHhhhhhhh
Confidence 99887 5798888776554
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.24 E-value=2.4e-10 Score=80.35 Aligned_cols=174 Identities=16% Similarity=0.199 Sum_probs=112.6
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCC------------------CCCCCCChHHHHHHHHHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV------------------TDRPDRTASFQAECMAKG 105 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~------------------~~~~~~~~~~~~~~~~~~ 105 (300)
..+||++||.+.+.. .|..+++.|.-. ...+++.-|-.-.+. ...........++.+..+
T Consensus 3 ~atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 458999999999999 998888877655 667776444211110 001113344446667777
Q ss_pred HHHh---C--CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHH
Q 022253 106 LRKL---G--VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKV 180 (300)
Q Consensus 106 i~~~---~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (300)
+++. + ..++.+-|.|+||.+++..+..+|..+.+++...+..........
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~------------------------- 136 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLP------------------------- 136 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhcc-------------------------
Confidence 7665 2 346899999999999999999998777777766655431110000
Q ss_pred HHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhC--
Q 022253 181 QFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVG-- 258 (300)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-- 258 (300)
.+. ...+ ..|++..||+.|++||....+...+.+.
T Consensus 137 ---------~~~--------------------------------~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~ 173 (206)
T KOG2112|consen 137 ---------GWL--------------------------------PGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSL 173 (206)
T ss_pred ---------CCc--------------------------------cccC--cchhheecccCCceeehHHHHHHHHHHHHc
Confidence 000 0001 5689999999999999876665555543
Q ss_pred -CCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 259 -QNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 259 -~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
..+++..++|.+|...-+.- +.+..|+++
T Consensus 174 ~~~~~f~~y~g~~h~~~~~e~----~~~~~~~~~ 203 (206)
T KOG2112|consen 174 GVRVTFKPYPGLGHSTSPQEL----DDLKSWIKT 203 (206)
T ss_pred CCceeeeecCCccccccHHHH----HHHHHHHHH
Confidence 24788899999997654332 334555544
No 136
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.21 E-value=1.6e-09 Score=80.42 Aligned_cols=96 Identities=18% Similarity=0.097 Sum_probs=71.7
Q ss_pred EEcCCC--CCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH-hCCcceEEEEEehhHHHH
Q 022253 50 LLHPFG--FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK-LGVEKCTLVGVSYGGMVG 126 (300)
Q Consensus 50 ~lhG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~lvG~S~Gg~~a 126 (300)
++|+.+ ++.. .|..+...|...+.|+++|.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPH-EYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHH-HHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 455544 5666 89999999988899999999999866543 24566666655554443 345789999999999999
Q ss_pred HHHHHh---CcccccceEEEcccCC
Q 022253 127 FKMAEM---YPDLVESMVVTCSVMG 148 (300)
Q Consensus 127 ~~~a~~---~p~~v~~~vl~~~~~~ 148 (300)
...+.+ .++.+.+++++++...
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCC
Confidence 988875 3456889988877543
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.17 E-value=5.4e-11 Score=91.21 Aligned_cols=206 Identities=16% Similarity=0.034 Sum_probs=113.1
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCC--CCCCCCCCC---CC---hHHHHHHHHHHHHHh-----
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFF--GSSVTDRPD---RT---ASFQAECMAKGLRKL----- 109 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~--G~s~~~~~~---~~---~~~~~~~~~~~i~~~----- 109 (300)
..|.||+-||.++... .|..+++.|++. |-|.++|.+|- |........ +. +.+...|+..+++.+
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 5689999999999998 999999999999 99999999984 333222111 11 122234444444333
Q ss_pred --------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccC--CCC-ccchhhhhhccchhhhhhccCcccHHHH
Q 022253 110 --------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM--GLT-ESVSNAALERIGYESWVDFLLPKTADAL 178 (300)
Q Consensus 110 --------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (300)
+..+|.++|||+||+.++.++....+-.....-+.... ... ............... ..
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~--------~~--- 217 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVW--------LP--- 217 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccc--------cc---
Confidence 33589999999999999999876654211111111000 000 000000000000000 00
Q ss_pred HHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHH-HHHHHHHHh
Q 022253 179 KVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQ-VARNLKEQV 257 (300)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~ 257 (300)
.. ...+.+ ..++..+...... ...--...+.+++.|++++.|..|.+.|.. ........+
T Consensus 218 --~~------~~~~rD----priravvA~~p~~-------~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l 278 (365)
T COG4188 218 --RQ------AYDLRD----PRIRAVVAINPAL-------GMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL 278 (365)
T ss_pred --hh------hhcccc----ccceeeeeccCCc-------ccccccccceeeecceeeecccccccCCcccccccccccC
Confidence 00 000000 0000000000000 000012456789999999999999987754 344555566
Q ss_pred CCCc--eEEEEcCCCCcccccChHHH
Q 022253 258 GQNA--TMESIEKAGHLVNLERPFVY 281 (300)
Q Consensus 258 ~~~~--~~~~~~~~gH~~~~~~~~~~ 281 (300)
+ +. -+..++++.|+-+++-.++.
T Consensus 279 ~-g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 279 P-GALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred C-cchhheeecCCCccccccccCccc
Confidence 6 44 67889999999988766553
No 138
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.15 E-value=1.5e-08 Score=80.97 Aligned_cols=83 Identities=23% Similarity=0.284 Sum_probs=62.8
Q ss_pred HHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----CCcceEEEEEehhHHHHHHHHHhCccccc
Q 022253 64 FQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVE 138 (300)
Q Consensus 64 ~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~ 138 (300)
.+...|...+.|+.+.+. ..|.+..++++.......+++.+ +..|++|+|.|.||+.++.+|+.+|+.+.
T Consensus 92 evG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~g 166 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVG 166 (581)
T ss_pred HHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccC
Confidence 345667766777777654 33445678888777766676665 23489999999999999999999999999
Q ss_pred ceEEEcccCCCCc
Q 022253 139 SMVVTCSVMGLTE 151 (300)
Q Consensus 139 ~~vl~~~~~~~~~ 151 (300)
-+|+.+++..++.
T Consensus 167 plvlaGaPlsywa 179 (581)
T PF11339_consen 167 PLVLAGAPLSYWA 179 (581)
T ss_pred ceeecCCCccccc
Confidence 9998888766543
No 139
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.12 E-value=1.5e-08 Score=83.31 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=82.9
Q ss_pred eeecC--CCeEEEEEccCC---CCCCceEEEEcCCCCCchhhHHHHHH-------------------hhhcCceEEeecC
Q 022253 25 TIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL-------------------ALAKTYEVYVPDF 80 (300)
Q Consensus 25 ~i~~~--~g~~l~~~~~~~---~~~~~~vv~lhG~~~~~~~~~~~~~~-------------------~l~~~~~v~~~d~ 80 (300)
++.+. .+..++||.... +.+.|.||++.|.++++. .+..+.+ .+.+..+++.+|.
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~ 93 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ 93 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccccceEEEee
Confidence 34444 677888865533 357899999999999888 7654421 1223478999996
Q ss_pred C-CCCCCCCCCCC---CChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHh----C------cccccc
Q 022253 81 L-FFGSSVTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y------PDLVES 139 (300)
Q Consensus 81 ~-G~G~s~~~~~~---~~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~------p~~v~~ 139 (300)
| |.|.|...... .+.++.++++..+|+.. ...+++|.|.|+||..+-.+|.. . +-.+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 5 89999765543 47788888888888765 44589999999999987766653 2 234889
Q ss_pred eEEEcccCCC
Q 022253 140 MVVTCSVMGL 149 (300)
Q Consensus 140 ~vl~~~~~~~ 149 (300)
+++.++....
T Consensus 174 i~IGng~~dp 183 (415)
T PF00450_consen 174 IAIGNGWIDP 183 (415)
T ss_dssp EEEESE-SBH
T ss_pred ceecCccccc
Confidence 9999988764
No 140
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=3.5e-09 Score=86.23 Aligned_cols=222 Identities=14% Similarity=0.099 Sum_probs=135.0
Q ss_pred eecCCCeEEEE--EccCC---CCCCceEEEEcCCCCCch--hhH--HHH--HHhhhcC-ceEEeecCCCCCCCCCCC---
Q 022253 26 IEIEPGTILNI--WVPKK---TTKKHAVVLLHPFGFDGI--LTW--QFQ--VLALAKT-YEVYVPDFLFFGSSVTDR--- 90 (300)
Q Consensus 26 i~~~~g~~l~~--~~~~~---~~~~~~vv~lhG~~~~~~--~~~--~~~--~~~l~~~-~~v~~~d~~G~G~s~~~~--- 90 (300)
+..+.|.+++- +.+.. .++-|+++++-|.++-.. ..| ... ...|+.. |-|+.+|-||.-.....-
T Consensus 618 fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ 697 (867)
T KOG2281|consen 618 FQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESH 697 (867)
T ss_pred eecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHH
Confidence 34556666653 22221 234689999999886332 011 111 2456666 999999999864432211
Q ss_pred -----CCCChHHHHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccc
Q 022253 91 -----PDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIG 162 (300)
Q Consensus 91 -----~~~~~~~~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~ 162 (300)
..-..++.++-+.-+.++. +.++|.+-|||+||++++....++|+-++..|.-+|..........-.-..++
T Consensus 698 ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg 777 (867)
T KOG2281|consen 698 IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMG 777 (867)
T ss_pred HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcC
Confidence 3356778888888888887 45789999999999999999999999777776666554321100000000000
Q ss_pred hhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCC
Q 022253 163 YESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGEND 242 (300)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 242 (300)
.++.....+.. ...... ...++.-.-..+++||--|
T Consensus 778 -----------------------------~P~~nE~gY~a------gSV~~~---------VeklpdepnRLlLvHGliD 813 (867)
T KOG2281|consen 778 -----------------------------YPDNNEHGYGA------GSVAGH---------VEKLPDEPNRLLLVHGLID 813 (867)
T ss_pred -----------------------------CCccchhcccc------hhHHHH---------HhhCCCCCceEEEEecccc
Confidence 01000000000 000000 0123333445899999999
Q ss_pred cccCHHHHHHHHHHhC---CCceEEEEcCCCCcccc-cChHHHHHHHHHHHhh
Q 022253 243 KIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTILAS 291 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 291 (300)
.-|.......+.+.+- +..++.++|+--|.+-. |..+-+...+..|+++
T Consensus 814 ENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 814 ENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred cchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 9888776666655542 35789999999998754 5556677888899875
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.09 E-value=2.2e-08 Score=72.45 Aligned_cols=103 Identities=18% Similarity=0.134 Sum_probs=74.3
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCc------eEEeecCCCC----CCCCC----C-------CCCCChHHHHHHHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTY------EVYVPDFLFF----GSSVT----D-------RPDRTASFQAECMA 103 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~G~----G~s~~----~-------~~~~~~~~~~~~~~ 103 (300)
.-|.+||||.+++.. ....++..|...+ -++.+|--|- |.=+. | ....+..++...+.
T Consensus 45 ~iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 348899999999999 9999998887665 2455555541 11111 1 02245566677777
Q ss_pred HHHHHh----CCcceEEEEEehhHHHHHHHHHhCcc-----cccceEEEcccCC
Q 022253 104 KGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMG 148 (300)
Q Consensus 104 ~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~ 148 (300)
.++..| ++.++.+|||||||.-...|+..+.+ .+..+|.++++..
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 777666 67899999999999999999887632 3889999988765
No 142
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.09 E-value=1.2e-09 Score=88.34 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=69.7
Q ss_pred CCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCC--CChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 56 FDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPD--RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 56 ~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.... .|..+++.|.+...+...|++|+|.+.+.... ...+.+.+.+.++.+..+.++++|+||||||.++..++..+
T Consensus 105 ~~~~-~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVY-YFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHH-HHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 3456 99999999999844558999999998765321 12233344444444555778999999999999999999888
Q ss_pred ccc----ccceEEEcccCCCC
Q 022253 134 PDL----VESMVVTCSVMGLT 150 (300)
Q Consensus 134 p~~----v~~~vl~~~~~~~~ 150 (300)
|+. |+++|.++++....
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CHhHHhHhccEEEECCCCCCC
Confidence 863 78899998875543
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.07 E-value=2.9e-09 Score=78.72 Aligned_cols=117 Identities=19% Similarity=0.198 Sum_probs=68.2
Q ss_pred CCeEEEEEccCC-----CCCC-ceEEEEcCCCCCchhhHHHHHH-------hhhcC-ceEEeecCCC-CCCCCCCCCCCC
Q 022253 30 PGTILNIWVPKK-----TTKK-HAVVLLHPFGFDGILTWQFQVL-------ALAKT-YEVYVPDFLF-FGSSVTDRPDRT 94 (300)
Q Consensus 30 ~g~~l~~~~~~~-----~~~~-~~vv~lhG~~~~~~~~~~~~~~-------~l~~~-~~v~~~d~~G-~G~s~~~~~~~~ 94 (300)
-|.+|.|...-+ .++- |.|||+||.+..+...+..+.. ...+. +-|+++.+-- +-.++. .....
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~~ 248 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLLY 248 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccchh
Confidence 466776644322 1233 8999999999876623332221 11222 4455555221 111211 01111
Q ss_pred hHHHHHHHHHH-HHHhCC--cceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 95 ASFQAECMAKG-LRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 95 ~~~~~~~~~~~-i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
.....+-+.++ .++.++ .+++++|.|+||+-++.++.++|+.+++.+++++..
T Consensus 249 l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 249 LIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred HHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 22223334422 233333 589999999999999999999999999999998764
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.06 E-value=2.1e-10 Score=83.59 Aligned_cols=87 Identities=23% Similarity=0.223 Sum_probs=52.9
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC-ce---EEeecCCCCCCCCCCCCC----CChHHHHHHHHHHHHHhCCcceEEE
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPD----RTASFQAECMAKGLRKLGVEKCTLV 117 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~lv 117 (300)
.||||+||.+++....|..+.+.|.++ |. ++++++-....+...... .+..++.+.|..+++..+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 589999999994444999999999988 88 899998543321111100 1123445555566666688 99999
Q ss_pred EEehhHHHHHHHHHhC
Q 022253 118 GVSYGGMVGFKMAEMY 133 (300)
Q Consensus 118 G~S~Gg~~a~~~a~~~ 133 (300)
|||+||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887644
No 145
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.04 E-value=2.1e-10 Score=89.47 Aligned_cols=107 Identities=21% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCCceEEEEcCCCCCc-hhhHH-HHHH-hhhc--C-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh------C
Q 022253 43 TKKHAVVLLHPFGFDG-ILTWQ-FQVL-ALAK--T-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL------G 110 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~-~~~~~-~~~~-~l~~--~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~------~ 110 (300)
.++|++|++|||.++. ...|. .+.+ .|.+ . ++|+++|+...-...............+.+..+|+.+ .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 5789999999999888 32444 3444 3555 4 9999999963211100000011222333444444433 3
Q ss_pred CcceEEEEEehhHHHHHHHHHhCcc--cccceEEEcccCCC
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMGL 149 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~ 149 (300)
.++++|||||+||.+|-.++..... +|..++.++|+.+.
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999988777 89999999998764
No 146
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.04 E-value=1e-07 Score=72.54 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=75.6
Q ss_pred CcccceeecCCCeEEEEEcc--CCCCCCceEEEEcCCCCCchhhH------HHHHHhhhcC--ceEEeecCCCCCCCCCC
Q 022253 20 GMTQRTIEIEPGTILNIWVP--KKTTKKHAVVLLHPFGFDGILTW------QFQVLALAKT--YEVYVPDFLFFGSSVTD 89 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~--~~~~~~~~vv~lhG~~~~~~~~~------~~~~~~l~~~--~~v~~~d~~G~G~s~~~ 89 (300)
.+++..+.. |++.|-...- ....+...||+.-|.++..+ .. ...+..+++. .+|+.+++||.|.|.+.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E-~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~ 188 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYE-NRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP 188 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhh-hhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC
Confidence 344555666 7887753222 22246789999999887655 31 1224444444 89999999999999866
Q ss_pred CCCCChHHHHHHHHHHHHHhC-------CcceEEEEEehhHHHHHHHHHhC
Q 022253 90 RPDRTASFQAECMAKGLRKLG-------VEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 90 ~~~~~~~~~~~~~~~~i~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
. +.++++.|-.+.++.+. .+.+++.|||+||.++..++.++
T Consensus 189 ~---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 189 P---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 5 45777777777666662 25799999999999988866654
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.03 E-value=6.8e-09 Score=83.97 Aligned_cols=160 Identities=15% Similarity=0.138 Sum_probs=109.1
Q ss_pred CCceEEEEcCCC-C--Cch--hhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH--------hC
Q 022253 44 KKHAVVLLHPFG-F--DGI--LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK--------LG 110 (300)
Q Consensus 44 ~~~~vv~lhG~~-~--~~~--~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~--------~~ 110 (300)
..|.++++||.+ . ++. ..|........+...+-++|++.- ....++...++.+..+.+. +.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~------igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP------IGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC------CCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 468899999988 1 111 133333333333378888888732 1224455555555555542 24
Q ss_pred CcceEEEEEehhHHHHHHHHHhCc-ccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccC
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEMYP-DLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKL 189 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~~p-~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (300)
..+++|+|.|+|+.++........ ..|+++|+++-+........
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr----------------------------------- 293 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR----------------------------------- 293 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-----------------------------------
Confidence 468999999999988888776543 34888888886543211100
Q ss_pred CCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCC
Q 022253 190 PTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKA 269 (300)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (300)
...++.+-.++.|+||+.|.+|..++++..+.+.+++....+++++.++
T Consensus 294 -------------------------------girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~a 342 (784)
T KOG3253|consen 294 -------------------------------GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGA 342 (784)
T ss_pred -------------------------------CCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCC
Confidence 0122345567899999999999999999999999999878899999999
Q ss_pred CCcccc
Q 022253 270 GHLVNL 275 (300)
Q Consensus 270 gH~~~~ 275 (300)
+|.+-.
T Consensus 343 dhsmai 348 (784)
T KOG3253|consen 343 DHSMAI 348 (784)
T ss_pred CccccC
Confidence 998755
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.99 E-value=1.5e-09 Score=81.86 Aligned_cols=128 Identities=17% Similarity=0.129 Sum_probs=84.7
Q ss_pred cccCcccceeecCCCeEEEE-EccC---CC-CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCC
Q 022253 17 KLVGMTQRTIEIEPGTILNI-WVPK---KT-TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRP 91 (300)
Q Consensus 17 ~~~~~~~~~i~~~~g~~l~~-~~~~---~~-~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~ 91 (300)
+...-.+.++...||-+|-- +..+ .. .+...|+|+-|..+-.+ . .-+..-+.-.|.|+.+++||++.|...+-
T Consensus 210 e~~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE-v-G~m~tP~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 210 ENKNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE-V-GVMNTPAQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred hcCCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE-e-eeecChHHhCceeeccCCCCccccCCCCC
Confidence 33344455566667766542 1111 11 23567888888765433 1 01112233459999999999999988775
Q ss_pred CCChHHHHHHHHH-HHHHhCC--cceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 92 DRTASFQAECMAK-GLRKLGV--EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 92 ~~~~~~~~~~~~~-~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
.......++.+.+ .|..++. +.+++.|||.||.-+..+|..+|+ |+++|+-++.-
T Consensus 288 p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 288 PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 5444444555544 4566654 579999999999999999999998 99999877653
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.96 E-value=1.4e-08 Score=75.77 Aligned_cols=170 Identities=15% Similarity=0.132 Sum_probs=106.6
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCC------CCC-CC--------------CC-------
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSV------TDR-PD--------------RT------- 94 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~------~~~-~~--------------~~------- 94 (300)
+-|.|||-||++++.. .|..+.-.|+.+ |-|.+++.|-+-.+. .+. +. ..
T Consensus 117 k~PvvvFSHGLggsRt-~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRT-LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CccEEEEecccccchh-hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 4589999999999999 999999999999 999999998654321 000 00 00
Q ss_pred -hHHHHHHHHH---HHHHh------------------------CCcceEEEEEehhHHHHHHHHHhCcccccceEEEccc
Q 022253 95 -ASFQAECMAK---GLRKL------------------------GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 95 -~~~~~~~~~~---~i~~~------------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
...-++++.. +++.+ .-.++.++|||+||..++...+.+.+ ++..|+++.+
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeeee
Confidence 0011222222 22222 11368899999999998887776654 8888888876
Q ss_pred CCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCC
Q 022253 147 MGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFS 226 (300)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (300)
..+-.. ..
T Consensus 275 M~Pl~~------------------------------------------------------------------------~~ 282 (399)
T KOG3847|consen 275 MFPLDQ------------------------------------------------------------------------LQ 282 (399)
T ss_pred ecccch------------------------------------------------------------------------hh
Confidence 532110 12
Q ss_pred CCCCcceEEEEeeCCCcccCHHHHHHHHHHhCC--CceEEEEcCCCCcccccChHHHHHHHHHHH
Q 022253 227 IPHFSQKIHLLWGENDKIFDMQVARNLKEQVGQ--NATMESIEKAGHLVNLERPFVYNRQLKTIL 289 (300)
Q Consensus 227 ~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 289 (300)
.++++.|+++|.-+ | +-..+....+.+..+. +..+..+.|+=|.-+.+-|-.+-..|..++
T Consensus 283 ~~~arqP~~finv~-~-fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f 345 (399)
T KOG3847|consen 283 YSQARQPTLFINVE-D-FQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVF 345 (399)
T ss_pred hhhccCCeEEEEcc-c-ccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHh
Confidence 35667799999843 3 3334555555555542 457778888888766555544444444443
No 150
>COG3150 Predicted esterase [General function prediction only]
Probab=98.95 E-value=1.7e-08 Score=68.05 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=65.7
Q ss_pred EEEEcCCCCCchhhHHHHH--HhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHH
Q 022253 48 VVLLHPFGFDGILTWQFQV--LALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~ 125 (300)
||++||+.++.. ...... +.+.....-+.+- . +.....+...++.+..++...+.+...|+|-|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~-------~-p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYS-------T-PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeee-------c-CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999999888 666543 4444433322221 1 2234678888999999999999888999999999999
Q ss_pred HHHHHHhCcccccceEEEcccCCC
Q 022253 126 GFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 126 a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
|.+++.++. +++ |+++|...+
T Consensus 73 At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCc
Confidence 999998875 444 456776653
No 151
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.91 E-value=2.1e-08 Score=74.80 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=68.4
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHH---hhhcCceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----CCcce
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVL---ALAKTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL----GVEKC 114 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~---~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~----~~~~~ 114 (300)
+++..+||+||+..+....-...++ .+.-.-.++.+.||+.|.-..-. ...+...-...+..+++.+ +.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4688999999999886622222222 22212579999999887532111 1123333345555555554 56799
Q ss_pred EEEEEehhHHHHHHHHHh----Cc-----ccccceEEEcccCC
Q 022253 115 TLVGVSYGGMVGFKMAEM----YP-----DLVESMVVTCSVMG 148 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~----~p-----~~v~~~vl~~~~~~ 148 (300)
+|++||||+.+.+.+... .+ .++..+++++|-..
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 999999999999887653 11 25778888887554
No 152
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.90 E-value=2.7e-07 Score=69.80 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCCcceEEEEeeCCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCcccc-cChHHHHHHHHHHH
Q 022253 228 PHFSQKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTIL 289 (300)
Q Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 289 (300)
...++|-++++++.|.+++.+..+.+.+... ..++...++++.|..|+ ++|+++.+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4456899999999999999988887776654 24778888999999888 69999999999885
No 153
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.89 E-value=1.9e-07 Score=72.14 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=37.5
Q ss_pred CCcceEEEEeeCCCcccCHHHHHHHHHHhC----CCceEEEEcCCCCccc
Q 022253 229 HFSQKIHLLWGENDKIFDMQVARNLKEQVG----QNATMESIEKAGHLVN 274 (300)
Q Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~ 274 (300)
..+.|+++.+|..|.++|....+.+.+.+. .++++..+++.+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 347899999999999999998888877664 2567888888999754
No 154
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.89 E-value=6.5e-08 Score=69.79 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=55.8
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCce-EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehh
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYE-VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~G 122 (300)
++..|||+.|||.+.. .+..+. +...+. ++++|+|..- .+. | ..+.+.+.|||+|||
T Consensus 10 ~~~LilfF~GWg~d~~-~f~hL~--~~~~~D~l~~yDYr~l~----------~d~---~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-PFSHLI--LPENYDVLICYDYRDLD----------FDF---D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCChH-Hhhhcc--CCCCccEEEEecCcccc----------ccc---c------cccCceEEEEEEeHH
Confidence 4579999999999988 666542 233443 5667887321 110 1 124689999999999
Q ss_pred HHHHHHHHHhCcccccceEEEcccCCC
Q 022253 123 GMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 123 g~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
-.+|..+....| ++..|.+++.+.+
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCCC
Confidence 999988866543 6777777776543
No 155
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.88 E-value=4.4e-08 Score=72.85 Aligned_cols=126 Identities=23% Similarity=0.330 Sum_probs=84.2
Q ss_pred CcccceeecCCCeEEEE--EccCC-CCCCceEEEEcCCCCCchhhHHHHH--HhhhcC--ceEEeecCC-------CCCC
Q 022253 20 GMTQRTIEIEPGTILNI--WVPKK-TTKKHAVVLLHPFGFDGILTWQFQV--LALAKT--YEVYVPDFL-------FFGS 85 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~--~~~~~-~~~~~~vv~lhG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~~-------G~G~ 85 (300)
..+...+.. +|.+..| +.+.. +.+.|.||++||..++.. .+.... +.|++. |-|+.+|-- +++.
T Consensus 34 ~~~~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~ 111 (312)
T COG3509 34 GSSVASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGN 111 (312)
T ss_pred cCCcccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCcccc
Confidence 344455666 4655554 44433 345578999999999988 666654 667766 899998522 2223
Q ss_pred CCCCCC----CCChHHHHHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 86 SVTDRP----DRTASFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 86 s~~~~~----~~~~~~~~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
+..+.. ..+...+.+.+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 112 ~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 112 WFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 322221 122333344444555555665 79999999999999999999999999998888766
No 156
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.86 E-value=7.7e-07 Score=70.04 Aligned_cols=158 Identities=14% Similarity=0.087 Sum_probs=96.7
Q ss_pred HHHHHHHh---CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHH
Q 022253 102 MAKGLRKL---GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADAL 178 (300)
Q Consensus 102 ~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (300)
+.+++++. .++++++.|.|==|..++..|+ ...||++++-+.-...-... .+
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~------------------------~l 213 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKA------------------------NL 213 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHH------------------------HH
Confidence 34444444 5779999999999999998888 45678887755433221111 11
Q ss_pred HHHHHHhhccCCCChHHHHHHHHHHHh---cchhhHHHHHHHhhhcccCCCCCCCcceEEEEeeCCCcccCHHHHHHHHH
Q 022253 179 KVQFDIACYKLPTLPAFVYKHILEALS---DHRKERIELLQALVISDKEFSIPHFSQKIHLLWGENDKIFDMQVARNLKE 255 (300)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 255 (300)
...++.... ..+.. +.+|...-. ........+..- .++-....+++.|.++|.|..|.+..++....+.+
T Consensus 214 ~h~y~~yG~---~ws~a-~~dY~~~gi~~~l~tp~f~~L~~i---vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d 286 (367)
T PF10142_consen 214 EHQYRSYGG---NWSFA-FQDYYNEGITQQLDTPEFDKLMQI---VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYD 286 (367)
T ss_pred HHHHHHhCC---CCccc-hhhhhHhCchhhcCCHHHHHHHHh---cCHHHHHHhcCccEEEEecCCCceeccCchHHHHh
Confidence 111111110 00000 111111111 011111111111 12222335678999999999999999999999999
Q ss_pred HhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhccc
Q 022253 256 QVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 256 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
.+++...+..+|+++|.... ..+.+.+..|+.....
T Consensus 287 ~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 287 KLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQN 322 (367)
T ss_pred hCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHc
Confidence 99978889999999998765 6688889999887643
No 157
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.83 E-value=1e-07 Score=78.11 Aligned_cols=125 Identities=15% Similarity=0.119 Sum_probs=84.1
Q ss_pred ceeecCCCeEEEE--EccCCCCCCceEEEEc--CCCCCchhh--HHHHHH---hhhcC-ceEEeecCCCCCCCCCCCCCC
Q 022253 24 RTIEIEPGTILNI--WVPKKTTKKHAVVLLH--PFGFDGILT--WQFQVL---ALAKT-YEVYVPDFLFFGSSVTDRPDR 93 (300)
Q Consensus 24 ~~i~~~~g~~l~~--~~~~~~~~~~~vv~lh--G~~~~~~~~--~~~~~~---~l~~~-~~v~~~d~~G~G~s~~~~~~~ 93 (300)
..|...||++|+. +.+...++.|+++..+ ...-..... -....+ .++.+ |.|+..|.||.|.|++.....
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 5567779999984 4555446778888888 222211001 111223 46666 999999999999999876433
Q ss_pred Ch--HHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 94 TA--SFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 94 ~~--~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
.. .+...|+.+.+... ...+|..+|.|++|...+.+|+..|.-+++++...+...
T Consensus 102 ~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 102 SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 22 12233444444443 346899999999999999999988877888887777655
No 158
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.81 E-value=5.6e-07 Score=72.96 Aligned_cols=116 Identities=10% Similarity=0.100 Sum_probs=68.8
Q ss_pred eEEEEEccCC--CCCCceEEEEcCCCCCchhhHHHHHHhhh-cC----ceEEeecCCCC-CCCCCCC-CCCChHHHHHHH
Q 022253 32 TILNIWVPKK--TTKKHAVVLLHPFGFDGILTWQFQVLALA-KT----YEVYVPDFLFF-GSSVTDR-PDRTASFQAECM 102 (300)
Q Consensus 32 ~~l~~~~~~~--~~~~~~vv~lhG~~~~~~~~~~~~~~~l~-~~----~~v~~~d~~G~-G~s~~~~-~~~~~~~~~~~~ 102 (300)
.++..+.+.. +...|+|+++||-.-.........++.|. +. ..++.+|..+. .++.... ...-.+.+++++
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eL 273 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQEL 273 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHH
Confidence 4555555543 23568899999954211101122233332 22 34567775321 1111111 111233345666
Q ss_pred HHHHHHh-----CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 103 AKGLRKL-----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 103 ~~~i~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
.-.+++. +.++.+|.|+||||..|+.++.++|+++.+++.+++..
T Consensus 274 lP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 274 LPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 6666664 33568899999999999999999999999999999864
No 159
>PLN02606 palmitoyl-protein thioesterase
Probab=98.81 E-value=2.9e-07 Score=69.60 Aligned_cols=102 Identities=19% Similarity=0.112 Sum_probs=63.6
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhc--CceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--CcceEEEE
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--VEKCTLVG 118 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~lvG 118 (300)
...|||+.||++++.. .....+.+.+.+ .+.+..+. .|-+. ...--....+.++.+.+.+.... .+-++++|
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~--~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV--QDSLFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc--ccccccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 4578999999994433 266777777752 34343433 22221 01111234444444444443321 13589999
Q ss_pred EehhHHHHHHHHHhCcc--cccceEEEcccCC
Q 022253 119 VSYGGMVGFKMAEMYPD--LVESMVVTCSVMG 148 (300)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 148 (300)
+|.||.++-.++.+.|+ .|+.+|.++++..
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 99999999999999877 5999999998754
No 160
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.73 E-value=7.1e-08 Score=76.14 Aligned_cols=102 Identities=22% Similarity=0.115 Sum_probs=80.6
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC-ce---EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEe
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YE---VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS 120 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S 120 (300)
.-++|++||++.+.. .|..+...+.+. +. ++.+++++. +.........+.+...+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 559999999988877 888877666665 55 888888865 22222335566677778888888888999999999
Q ss_pred hhHHHHHHHHHhCc--ccccceEEEcccCCC
Q 022253 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMGL 149 (300)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 149 (300)
+||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999998887 789999999987553
No 161
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.72 E-value=4.6e-08 Score=72.39 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=51.2
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhc---CceEEeecCCCCCCCCCCCCCCChHH----HHHHHHHHHHHhCC--cce
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAK---TYEVYVPDFLFFGSSVTDRPDRTASF----QAECMAKGLRKLGV--EKC 114 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~----~~~~~~~~i~~~~~--~~~ 114 (300)
+...|||+||+.++.. .|..+...+.. ++.--.+...++..... .....++. ++++|.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~-~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNEF-KTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhccccccc-ccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4568999999999998 99887766665 22211222222211111 11123333 34445555544443 489
Q ss_pred EEEEEehhHHHHHHHHH
Q 022253 115 TLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~ 131 (300)
.+||||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999865554
No 162
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.66 E-value=9.9e-07 Score=69.16 Aligned_cols=107 Identities=14% Similarity=0.099 Sum_probs=69.1
Q ss_pred CCCceEEEEcCCCCCch---hhH---HHHHHhhhcCceEEeecCCCCCCCC-CCCCCCChHHHHHHHHHHHHHhCCcceE
Q 022253 43 TKKHAVVLLHPFGFDGI---LTW---QFQVLALAKTYEVYVPDFLFFGSSV-TDRPDRTASFQAECMAKGLRKLGVEKCT 115 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~---~~~---~~~~~~l~~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 115 (300)
++.|.||++||+|-.-. ... ..+...|. ...++++|+.-..... ...-+.-..+.++-...+++..+.++++
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 35799999999885433 011 12223344 4688888886432000 1111233445556666677677889999
Q ss_pred EEEEehhHHHHHHHHHhCc-----ccccceEEEcccCCCC
Q 022253 116 LVGVSYGGMVGFKMAEMYP-----DLVESMVVTCSVMGLT 150 (300)
Q Consensus 116 lvG~S~Gg~~a~~~a~~~p-----~~v~~~vl~~~~~~~~ 150 (300)
|+|-|.||.+++.+..... ...+++|+++|+....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999998775321 1367999999998764
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.62 E-value=4e-07 Score=69.90 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=68.5
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhh---cCceEEeecCCCCCCCCCCC-CCCChHHHHHHHHHHHHHh----CCcce
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALA---KTYEVYVPDFLFFGSSVTDR-PDRTASFQAECMAKGLRKL----GVEKC 114 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~---~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~----~~~~~ 114 (300)
..+..+||+||+..+-...-...++-.. .....+.+.||..|.--.-. ...+...-..+++.+++.+ ..+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 4678999999999776533333333332 23788999999766432211 1122333344555555555 56789
Q ss_pred EEEEEehhHHHHHHHHHh--------CcccccceEEEcccCC
Q 022253 115 TLVGVSYGGMVGFKMAEM--------YPDLVESMVVTCSVMG 148 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~--------~p~~v~~~vl~~~~~~ 148 (300)
+|++||||.++++....+ .+.+++-+|+.+|-..
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999999987654 2346788888877544
No 164
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.62 E-value=7.2e-07 Score=73.67 Aligned_cols=115 Identities=17% Similarity=0.093 Sum_probs=73.8
Q ss_pred EEEEEccCC--CCCCceEEEEcCCCCCchhh--HHHHHHhhhcC--ceEEeecCCCCCCCCCCC-------CCCChHHHH
Q 022253 33 ILNIWVPKK--TTKKHAVVLLHPFGFDGILT--WQFQVLALAKT--YEVYVPDFLFFGSSVTDR-------PDRTASFQA 99 (300)
Q Consensus 33 ~l~~~~~~~--~~~~~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~-------~~~~~~~~~ 99 (300)
+.+|+.... ++++|.+|++-|= ++.... ...++..|+++ -.++++++|-+|.|.+.. ...+.++..
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QAL 93 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQAL 93 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHH
Confidence 445654322 2346666666444 433312 22355667776 789999999999997532 337888889
Q ss_pred HHHHHHHHHhC-------CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 100 ECMAKGLRKLG-------VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 100 ~~~~~~i~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+|+..+++.+. ..|++++|-|+||.+|..+-.++|+.|.+.+.-+++..
T Consensus 94 aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 94 ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 99999998763 23899999999999999999999999999998887764
No 165
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=2.9e-06 Score=62.16 Aligned_cols=234 Identities=16% Similarity=0.158 Sum_probs=120.2
Q ss_pred CCceEEEEcCCCCCchhhHH-HHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHH--------HHHHH------
Q 022253 44 KKHAVVLLHPFGFDGILTWQ-FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM--------AKGLR------ 107 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~-~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~--------~~~i~------ 107 (300)
.++..+++-|-|++.. .-+ .+...+.++ ...+.++-|-+|....+......-+.+.|+ .+...
T Consensus 112 ~~~KOG~~a~tgdh~y-~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVY-TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred cCCeeEEEeecCCcee-EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 3455555556555443 212 122334444 778888888888776543221111222222 12111
Q ss_pred HhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhhhhccCcccHHHHHHHHHHhhc
Q 022253 108 KLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESWVDFLLPKTADALKVQFDIACY 187 (300)
Q Consensus 108 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (300)
..|..++.++|-||||.+|......++..|.-+-++++.......... .+.. ....+.............
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg-~l~~-~~s~~~~~~~~t~~~~~~-------- 260 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEG-LLLQ-DTSKMKRFNQTTNKSGYT-------- 260 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhh-hhhh-hhHHHHhhccCcchhhhh--------
Confidence 235679999999999999999999887666655555443221111110 1110 000000000000000000
Q ss_pred cCCCChHHHHHHHHHHHhcc-hhhHHHHHHHhhhcccCCCCCCCcc-----eEEEEeeCCCcccCHHHHHHHHHHhCCCc
Q 022253 188 KLPTLPAFVYKHILEALSDH-RKERIELLQALVISDKEFSIPHFSQ-----KIHLLWGENDKIFDMQVARNLKEQVGQNA 261 (300)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~-----P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 261 (300)
...+...+....+....+ ......+........ ..+....+ -+.++.+.+|..+|......+.+.+| ++
T Consensus 261 --~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~--T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WP-g~ 335 (371)
T KOG1551|consen 261 --SRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDEC--THVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWP-GC 335 (371)
T ss_pred --hhCchhhHHHHHHHhhhcchHHHHHHHHHHHHhh--chhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCC-CC
Confidence 001111111111111111 111111222221110 11122222 26778899999999988899999998 99
Q ss_pred eEEEEcCCCCcc-cccChHHHHHHHHHHHhhccc
Q 022253 262 TMESIEKAGHLV-NLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 262 ~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~~ 294 (300)
++..++ +||.. ++-+-+.+...|.+-|+++..
T Consensus 336 eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 336 EVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 999998 69974 456778899999999988763
No 166
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.61 E-value=2.1e-05 Score=61.48 Aligned_cols=127 Identities=12% Similarity=0.107 Sum_probs=79.8
Q ss_pred ccceeecCCCeEEEEEccCC-CCCCceEEEEcCCCCCch--hhHHHHHHhhhcC-ceEEeecCCCC--CCCCC-------
Q 022253 22 TQRTIEIEPGTILNIWVPKK-TTKKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFF--GSSVT------- 88 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~-~~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~G~--G~s~~------- 88 (300)
+.+++...+...+..+.+.. ....-.||++||.+.+.. ..-..+...|.+. +..+++.+|.- .....
T Consensus 63 e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred hcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 44556665555555555443 344569999999998864 1334556778777 99999988861 10000
Q ss_pred ---CC-CC---C-------------Ch----HHHHHHHHHHHH---HhCCcceEEEEEehhHHHHHHHHHhCcc-cccce
Q 022253 89 ---DR-PD---R-------------TA----SFQAECMAKGLR---KLGVEKCTLVGVSYGGMVGFKMAEMYPD-LVESM 140 (300)
Q Consensus 89 ---~~-~~---~-------------~~----~~~~~~~~~~i~---~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~~ 140 (300)
.. .. . .. +.+..-|.+++. ..+..+++|+||+.|+..+..+....+. .++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 00 00 0 01 122223333333 3355569999999999999999988764 58999
Q ss_pred EEEcccCC
Q 022253 141 VVTCSVMG 148 (300)
Q Consensus 141 vl~~~~~~ 148 (300)
|++++...
T Consensus 223 V~I~a~~p 230 (310)
T PF12048_consen 223 VLINAYWP 230 (310)
T ss_pred EEEeCCCC
Confidence 99998754
No 167
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.56 E-value=1.8e-06 Score=61.44 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=75.0
Q ss_pred CCceEEEEcCCCCCch--hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC----cceEE
Q 022253 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV----EKCTL 116 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l 116 (300)
.+..|||+-|++..-. ..-..+...|.+. |.++-+.++.+- .-....++++.++|+..++++++. .+++|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy---~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY---NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc---cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 3467999999887543 2445677788877 999998876321 011335677789999999998843 38999
Q ss_pred EEEehhHHHHHHHHHh--CcccccceEEEcccCC
Q 022253 117 VGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (300)
Q Consensus 117 vG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (300)
+|||.|+.-.+.|..+ .+..+.+.|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999988888732 3556888888888765
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.52 E-value=1.2e-06 Score=68.65 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=54.2
Q ss_pred CCCCCc-ceEEEEeeCCCcccCHHHHHHHHHHhCC-CceEEEEcCCCCcccccChH---HHHHHHHHHHhhc
Q 022253 226 SIPHFS-QKIHLLWGENDKIFDMQVARNLKEQVGQ-NATMESIEKAGHLVNLERPF---VYNRQLKTILASL 292 (300)
Q Consensus 226 ~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 292 (300)
.+.++. +|+++++|.+|.++|......+.+.... ..+...+++++|......+. +....+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344455 7999999999999999999999988875 56888889999988764433 6888888888765
No 169
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.50 E-value=4.6e-07 Score=69.20 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHh-CCc--ceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 97 FQAECMAKGLRKL-GVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 97 ~~~~~~~~~i~~~-~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
.+.++|...|+.. ... +..|+|+||||..|+.++.++|+.+.+++.++|....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 3456677766654 222 2799999999999999999999999999999987543
No 170
>PLN02209 serine carboxypeptidase
Probab=98.48 E-value=9.4e-05 Score=60.56 Aligned_cols=124 Identities=16% Similarity=0.088 Sum_probs=78.6
Q ss_pred ceeecC--CCeEEEEEccCC---CCCCceEEEEcCCCCCchhhHHHHHH----------------hh-------hcCceE
Q 022253 24 RTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVL----------------AL-------AKTYEV 75 (300)
Q Consensus 24 ~~i~~~--~g~~l~~~~~~~---~~~~~~vv~lhG~~~~~~~~~~~~~~----------------~l-------~~~~~v 75 (300)
.++.+. .|..+.|+.... +...|.|+++.|.++.+. .+..+.+ .| .+..++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 120 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANI 120 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcE
Confidence 344553 356777765432 345799999999998876 5533210 11 223789
Q ss_pred Eeec-CCCCCCCCCCC--CCCChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHhC----------cc
Q 022253 76 YVPD-FLFFGSSVTDR--PDRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----------PD 135 (300)
Q Consensus 76 ~~~d-~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p~ 135 (300)
+.+| ..|.|.|.... ...+.+..++++..+++.. ...+++|.|.|+||..+-.+|..- +-
T Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~i 200 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPI 200 (437)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCce
Confidence 9999 45888885433 2223334457777766653 335899999999998777666431 11
Q ss_pred cccceEEEcccCC
Q 022253 136 LVESMVVTCSVMG 148 (300)
Q Consensus 136 ~v~~~vl~~~~~~ 148 (300)
.++++++.++...
T Consensus 201 nl~Gi~igng~td 213 (437)
T PLN02209 201 NLQGYVLGNPITH 213 (437)
T ss_pred eeeeEEecCcccC
Confidence 4678888888654
No 171
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.45 E-value=1.2e-06 Score=56.31 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=54.9
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
..|+|++.++.|+..|.+.++.+++.++ +++++.+++.||..+.....-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-CceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 5899999999999999999999999998 899999999999988655567889999999754
No 172
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.44 E-value=0.0001 Score=60.29 Aligned_cols=125 Identities=16% Similarity=0.060 Sum_probs=77.1
Q ss_pred cceeecC--CCeEEEEEccCC---CCCCceEEEEcCCCCCchhhHHHHH---H-------------hh-------hcCce
Q 022253 23 QRTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQV---L-------------AL-------AKTYE 74 (300)
Q Consensus 23 ~~~i~~~--~g~~l~~~~~~~---~~~~~~vv~lhG~~~~~~~~~~~~~---~-------------~l-------~~~~~ 74 (300)
..++.+. .+..++||.... +...|.|+++.|.++.+. .+..+. + .| .+..+
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS-~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 117 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSC-LGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMAN 117 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHH-HHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCc
Confidence 3445553 356777765432 346799999999988776 432211 1 11 22378
Q ss_pred EEeec-CCCCCCCCCCCCC-C-ChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHhC----------c
Q 022253 75 VYVPD-FLFFGSSVTDRPD-R-TASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMY----------P 134 (300)
Q Consensus 75 v~~~d-~~G~G~s~~~~~~-~-~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~----------p 134 (300)
++.+| .-|.|.|...... . +-...++++..+++.. ...+++|.|.|+||..+-.+|..- +
T Consensus 118 llfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 118 IIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 99999 5588988644321 1 1122345666555543 346899999999998777666531 1
Q ss_pred ccccceEEEcccCC
Q 022253 135 DLVESMVVTCSVMG 148 (300)
Q Consensus 135 ~~v~~~vl~~~~~~ 148 (300)
-.++|+++-+|...
T Consensus 198 inLkGi~iGNg~t~ 211 (433)
T PLN03016 198 INLQGYMLGNPVTY 211 (433)
T ss_pred ccceeeEecCCCcC
Confidence 14788888888654
No 173
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.40 E-value=0.00016 Score=58.91 Aligned_cols=124 Identities=15% Similarity=0.031 Sum_probs=81.4
Q ss_pred ceeecC--CCeEEEEEccCC---CCCCceEEEEcCCCCCchhhHHHHHHhh-------------------hcCceEEeec
Q 022253 24 RTIEIE--PGTILNIWVPKK---TTKKHAVVLLHPFGFDGILTWQFQVLAL-------------------AKTYEVYVPD 79 (300)
Q Consensus 24 ~~i~~~--~g~~l~~~~~~~---~~~~~~vv~lhG~~~~~~~~~~~~~~~l-------------------~~~~~v~~~d 79 (300)
.++.+. .|..++||.... +..+|.||++.|++|.+. .- .+..++ .+..+++.+|
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS-l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd 124 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS-LG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLD 124 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc-hh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEe
Confidence 456665 588999876543 345889999999998775 33 222221 1226788888
Q ss_pred CC-CCCCCCCCCC---CCChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHh----C-----c-cccc
Q 022253 80 FL-FFGSSVTDRP---DRTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEM----Y-----P-DLVE 138 (300)
Q Consensus 80 ~~-G~G~s~~~~~---~~~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~----~-----p-~~v~ 138 (300)
.| |.|.|-.... ..+-+..++|+..++... ..++++|.|-|++|...-.+|.. . | -.++
T Consensus 125 ~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLk 204 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLK 204 (454)
T ss_pred cCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccce
Confidence 87 7777753332 134455567776666543 44689999999999877776653 1 1 1478
Q ss_pred ceEEEcccCCC
Q 022253 139 SMVVTCSVMGL 149 (300)
Q Consensus 139 ~~vl~~~~~~~ 149 (300)
|+++-+|....
T Consensus 205 G~~IGNg~td~ 215 (454)
T KOG1282|consen 205 GYAIGNGLTDP 215 (454)
T ss_pred EEEecCcccCc
Confidence 88888887654
No 174
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.39 E-value=5.6e-06 Score=67.79 Aligned_cols=230 Identities=12% Similarity=0.025 Sum_probs=124.2
Q ss_pred ccceeecCCCeEEEEEccC-C--CCCCceEEEEcCCCCCch-hhHHHHHH-hhhcCceEEeecCCCCCCCCCC-------
Q 022253 22 TQRTIEIEPGTILNIWVPK-K--TTKKHAVVLLHPFGFDGI-LTWQFQVL-ALAKTYEVYVPDFLFFGSSVTD------- 89 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~-~--~~~~~~vv~lhG~~~~~~-~~~~~~~~-~l~~~~~v~~~d~~G~G~s~~~------- 89 (300)
+.......||++|.|+... + ..+.|++|+--|...-+. +.|..... .|.+....+..+.||=|+=...
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 3344455599999997764 2 235677776666544333 45555554 4555577777789986653321
Q ss_pred -CCCCChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCCccchhhhhhccchhhh
Q 022253 90 -RPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLTESVSNAALERIGYESW 166 (300)
Q Consensus 90 -~~~~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (300)
.....++++++....+++.= ..+++.+.|-|-||.+.-.+..++|+.+.++|+--|...+-... ....+....
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh----~l~aG~sW~ 550 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH----LLTAGSSWI 550 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc----ccccchhhH
Confidence 12233444444444443331 22478999999999999999999999888877766654321100 000011111
Q ss_pred hhccCcccHHHHHHHHHHhhccCCCChHHHHHHHHHHHhcchhhHHHHHHHhhhcccCCCCC--CCcceEEEEeeCCCcc
Q 022253 167 VDFLLPKTADALKVQFDIACYKLPTLPAFVYKHILEALSDHRKERIELLQALVISDKEFSIP--HFSQKIHLLWGENDKI 244 (300)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~P~l~i~g~~D~~ 244 (300)
.++-.+..++... ++. .+++...+. +.--|+||-.+..|.-
T Consensus 551 ~EYG~Pd~P~d~~--------------------~l~-----------------~YSPy~nl~~g~kYP~~LITTs~~DDR 593 (648)
T COG1505 551 AEYGNPDDPEDRA--------------------FLL-----------------AYSPYHNLKPGQKYPPTLITTSLHDDR 593 (648)
T ss_pred hhcCCCCCHHHHH--------------------HHH-----------------hcCchhcCCccccCCCeEEEccccccc
Confidence 1111111111111 111 111111222 2223799999999988
Q ss_pred cCHHHHHHHHHHhCC-Cce--EEEEcCCCCcccccChH--HHHHHHHHHHhhc
Q 022253 245 FDMQVARNLKEQVGQ-NAT--MESIEKAGHLVNLERPF--VYNRQLKTILASL 292 (300)
Q Consensus 245 ~~~~~~~~~~~~~~~-~~~--~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~~ 292 (300)
|.+..+++++.++.. +.. +.+=-++||..--+..+ .-...+..||.+.
T Consensus 594 VHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 594 VHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRT 646 (648)
T ss_pred ccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHh
Confidence 888888888887751 222 22333579987654433 2333445566543
No 175
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.37 E-value=6.8e-06 Score=69.33 Aligned_cols=120 Identities=14% Similarity=0.102 Sum_probs=70.5
Q ss_pred eeecCCCeEEEEEccCC--------CCCCceEEEEcCCCCCchhhHHHHHHhhh-----------------cCceEEeec
Q 022253 25 TIEIEPGTILNIWVPKK--------TTKKHAVVLLHPFGFDGILTWQFQVLALA-----------------KTYEVYVPD 79 (300)
Q Consensus 25 ~i~~~~g~~l~~~~~~~--------~~~~~~vv~lhG~~~~~~~~~~~~~~~l~-----------------~~~~v~~~d 79 (300)
.-...+-..++.+..|. +.++-||+||+|..|+.. .-+.++..-. .+++..++|
T Consensus 61 ~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVD 139 (973)
T KOG3724|consen 61 LTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVD 139 (973)
T ss_pred ccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEc
Confidence 33344556666443332 246789999999999887 6666553322 126667777
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHh-----C--------CcceEEEEEehhHHHHHHHHHh---CcccccceEEE
Q 022253 80 FLFFGSSVTDRPDRTASFQAECMAKGLRKL-----G--------VEKCTLVGVSYGGMVGFKMAEM---YPDLVESMVVT 143 (300)
Q Consensus 80 ~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~-----~--------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~~vl~ 143 (300)
+-+- -..-...+..+.++.+.+.|+.+ + ...|+++||||||.+|...+.. .++.|.-++..
T Consensus 140 FnEe---~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 140 FNEE---FTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred ccch---hhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 6430 00002244555666555555443 2 1239999999999999877642 23446666666
Q ss_pred cccCC
Q 022253 144 CSVMG 148 (300)
Q Consensus 144 ~~~~~ 148 (300)
+++..
T Consensus 217 ssPH~ 221 (973)
T KOG3724|consen 217 SSPHA 221 (973)
T ss_pred cCccc
Confidence 66544
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.35 E-value=4.8e-06 Score=70.18 Aligned_cols=119 Identities=18% Similarity=0.104 Sum_probs=71.8
Q ss_pred CCCeEEEEEccCC---CCCCceEEEEcCCCCC---ch-hhHHHHHHhhhcCceEEeecCC-C---CCCCCCCC--CCCCh
Q 022253 29 EPGTILNIWVPKK---TTKKHAVVLLHPFGFD---GI-LTWQFQVLALAKTYEVYVPDFL-F---FGSSVTDR--PDRTA 95 (300)
Q Consensus 29 ~~g~~l~~~~~~~---~~~~~~vv~lhG~~~~---~~-~~~~~~~~~l~~~~~v~~~d~~-G---~G~s~~~~--~~~~~ 95 (300)
.|...+..+.+.. .+..|+||++||.+-. .. .....++.... .+.|+++++| | +..+.... .....
T Consensus 76 Edcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~ 154 (493)
T cd00312 76 EDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGL 154 (493)
T ss_pred CcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhH
Confidence 3777888887753 2457999999997532 22 01222222211 2889999999 3 33222111 12223
Q ss_pred HHH---HHHHHHHHHHhCC--cceEEEEEehhHHHHHHHHHh--CcccccceEEEcccCC
Q 022253 96 SFQ---AECMAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (300)
Q Consensus 96 ~~~---~~~~~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (300)
.+. .+.+.+-++..+. ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 333 2334444444443 589999999999998887765 2446888888887654
No 177
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.34 E-value=4e-05 Score=63.79 Aligned_cols=126 Identities=12% Similarity=0.051 Sum_probs=80.2
Q ss_pred ceeecCCCeEEEE----Ecc-CCCCCCceEEEEcCCCCCch-hhHHHHH-HhhhcCceEEeecCCCCCCCCCC-------
Q 022253 24 RTIEIEPGTILNI----WVP-KKTTKKHAVVLLHPFGFDGI-LTWQFQV-LALAKTYEVYVPDFLFFGSSVTD------- 89 (300)
Q Consensus 24 ~~i~~~~g~~l~~----~~~-~~~~~~~~vv~lhG~~~~~~-~~~~~~~-~~l~~~~~v~~~d~~G~G~s~~~------- 89 (300)
..+...||+++.. ... .-.++.|.+|.--|.-+... +.|.... ..|.+.+---..-.||=|.-...
T Consensus 422 iwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~ 501 (682)
T COG1770 422 IWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKL 501 (682)
T ss_pred EEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhh
Confidence 3344468876643 221 12356777777777655443 3444332 33444444444455765543322
Q ss_pred -CCCCChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 90 -RPDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 90 -~~~~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
....++.++++....+++.= ..+.++++|-|.||++....+...|+.++++|+--|....
T Consensus 502 l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 502 LNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred hhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 13467777777777766553 2347999999999999999999999999999998887764
No 178
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.34 E-value=3.8e-06 Score=67.50 Aligned_cols=118 Identities=21% Similarity=0.276 Sum_probs=75.1
Q ss_pred CCeEEEEEccC-CCCCCceEEEEcCCCC---CchhhHHHHHHhhhcC--ceEEeecCCC--CCC---CCCC-----CCCC
Q 022253 30 PGTILNIWVPK-KTTKKHAVVLLHPFGF---DGILTWQFQVLALAKT--YEVYVPDFLF--FGS---SVTD-----RPDR 93 (300)
Q Consensus 30 ~g~~l~~~~~~-~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~~--~~v~~~d~~G--~G~---s~~~-----~~~~ 93 (300)
|...|..|.+. +..+.|++|+|||.+- +.. ....-...|+++ +-|+++++|= .|. |... ....
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s-~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGS-EPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCc-ccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 78888889887 5456799999999763 322 222223567666 8888999881 121 1111 1123
Q ss_pred ChHHH---HHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHh--CcccccceEEEcccCC
Q 022253 94 TASFQ---AECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (300)
Q Consensus 94 ~~~~~---~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (300)
.+.++ .+.+.+-|++.|.+ +|.|+|+|.||+.++.+.+. ....++++|+.++...
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 34443 34455556666554 79999999999988876653 1235778888887765
No 179
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.34 E-value=0.00045 Score=51.83 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=77.7
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
..|.|+++-.+.++.....+..++.|-....|+..|+-.--.-+.....++.+++++.+.+.+..+|.+ +++++.|.-+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 456788888877766535666778887778999999875444444446689999999999999999955 8888888765
Q ss_pred H-----HHHHHHHhCcccccceEEEcccCCC
Q 022253 124 M-----VGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 124 ~-----~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
. +++..+...|.....+++++++...
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 4 3444444567677889999987654
No 180
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=3.6e-05 Score=63.72 Aligned_cols=127 Identities=13% Similarity=0.075 Sum_probs=81.9
Q ss_pred ccceeecCCCeEEEEE----cc-CCCCCCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC----
Q 022253 22 TQRTIEIEPGTILNIW----VP-KKTTKKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---- 90 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~----~~-~~~~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~---- 90 (300)
++..+...||+.+... .. ...+++|.+|..+|.-+-+- ..|..-...|.+. +-....|.||=|+-....
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G 521 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDG 521 (712)
T ss_pred EEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhcc
Confidence 4455666699765421 11 11246788887777654332 3444333333344 666667899866543221
Q ss_pred ----CCCChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 91 ----PDRTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 91 ----~~~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
...+++++......+++.= ...+..+.|.|.||.++..++.++|+.+.++|+--|...
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 2356666666666666542 345899999999999999999999999999988777655
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.18 E-value=5.1e-05 Score=53.88 Aligned_cols=105 Identities=15% Similarity=0.123 Sum_probs=68.0
Q ss_pred CCceEEEEcCCCCCchhhHHH--HHH-hhhcC-ceEEeecC--CCC---CCCCCCC-----------------CC-CChH
Q 022253 44 KKHAVVLLHPFGFDGILTWQF--QVL-ALAKT-YEVYVPDF--LFF---GSSVTDR-----------------PD-RTAS 96 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~--~~~-~l~~~-~~v~~~d~--~G~---G~s~~~~-----------------~~-~~~~ 96 (300)
.-|++.++.|+..+.. .+.. -.+ .-+++ +.|+++|- ||. |.++.-. .. .-.+
T Consensus 43 ~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHE-NFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccch-hhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHH
Confidence 3588999999998877 4432 122 33344 88999984 443 2222100 00 1122
Q ss_pred HHHHHHHHHHHH----hCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 97 FQAECMAKGLRK----LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 97 ~~~~~~~~~i~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
..++++.+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|...+
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 334555555553 23447899999999999999999999999998888887653
No 182
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.16 E-value=0.00059 Score=54.21 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=44.3
Q ss_pred ceEEEEeeCCCcccCHHHHHHHHHHhC---CCceEEEE-----------cCCCCcccccChHHHHHHHHHHHhhccc
Q 022253 232 QKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESI-----------EKAGHLVNLERPFVYNRQLKTILASLVH 294 (300)
Q Consensus 232 ~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-----------~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 294 (300)
+-.+..|+..|..+|.+.-+.+.+.+. =++++..+ .+-.|.+-+....-+.+.+-..|++...
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 346778999999999998888777664 36777777 3447776666556666666666666443
No 183
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.09 E-value=2.5e-05 Score=63.26 Aligned_cols=81 Identities=16% Similarity=0.189 Sum_probs=57.8
Q ss_pred hHHHHHHhhhcC-c------eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh---CCcceEEEEEehhHHHHHHHH
Q 022253 61 TWQFQVLALAKT-Y------EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL---GVEKCTLVGVSYGGMVGFKMA 130 (300)
Q Consensus 61 ~~~~~~~~l~~~-~------~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~~~a 130 (300)
.|..+++.|.+. | ...-+|+|-- .. ..+.+...+...|+.. ..+|++||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-------PA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-------hh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 788999999863 2 2233788721 11 3345566666666554 357999999999999999998
Q ss_pred HhCcc------cccceEEEcccCCC
Q 022253 131 EMYPD------LVESMVVTCSVMGL 149 (300)
Q Consensus 131 ~~~p~------~v~~~vl~~~~~~~ 149 (300)
...+. .|+++|.++++...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCC
Confidence 87643 59999999987654
No 184
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.05 E-value=8.9e-05 Score=56.55 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=64.5
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--CcceEEEE
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--VEKCTLVG 118 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~lvG 118 (300)
...|+|+.||+|++.. .....+.+.+.+. ..+.++.. |.+....--....+.++.+.+.+.... .+-++++|
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 4578999999998765 2333444444332 44555443 333222222344455555544443321 13599999
Q ss_pred EehhHHHHHHHHHhCcc--cccceEEEcccCC
Q 022253 119 VSYGGMVGFKMAEMYPD--LVESMVVTCSVMG 148 (300)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 148 (300)
+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 99999999999999887 5999999988743
No 185
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.01 E-value=0.00092 Score=52.84 Aligned_cols=61 Identities=15% Similarity=0.208 Sum_probs=48.6
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHhC-----------------------CC-ceEEEEcCCCCcccccChHHHHHHHH
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQVG-----------------------QN-ATMESIEKAGHLVNLERPFVYNRQLK 286 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 286 (300)
..+||+..|..|.+++.-..+.+.+.+. .+ .+++.+.+|||++. .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 3689999999999999876666665553 12 56677779999996 59999999999
Q ss_pred HHHhhc
Q 022253 287 TILASL 292 (300)
Q Consensus 287 ~fl~~~ 292 (300)
.|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999753
No 186
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=7.7e-05 Score=55.10 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=65.9
Q ss_pred ceEEEEcCCCCCchhh--HHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC--CcceEEEEE
Q 022253 46 HAVVLLHPFGFDGILT--WQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG--VEKCTLVGV 119 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~lvG~ 119 (300)
-|+|++||++++.. . ...+.+.+.+. ..|++.|. |-| .....-....+.++.+.+.+.... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~-~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCS-SLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccc-cchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 68999999998776 4 66677777665 77888886 344 111111234444444444443221 245899999
Q ss_pred ehhHHHHHHHHHhCcc-cccceEEEcccCC
Q 022253 120 SYGGMVGFKMAEMYPD-LVESMVVTCSVMG 148 (300)
Q Consensus 120 S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 148 (300)
|.||.++-.++..-++ .|+.+|.++++-.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999988876544 5889998887643
No 187
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.96 E-value=7.3e-05 Score=63.91 Aligned_cols=120 Identities=18% Similarity=0.074 Sum_probs=65.0
Q ss_pred cCCCeEEEEEccCCCC---CCceEEEEcCCCCCch----hhHHHHHHhhhcC-ceEEeecCC----CCCCCCCCC---CC
Q 022253 28 IEPGTILNIWVPKKTT---KKHAVVLLHPFGFDGI----LTWQFQVLALAKT-YEVYVPDFL----FFGSSVTDR---PD 92 (300)
Q Consensus 28 ~~~g~~l~~~~~~~~~---~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~-~~v~~~d~~----G~G~s~~~~---~~ 92 (300)
..|-..|..+.+.... ..|++|+|||.+.... ..+.. ...+.++ .-|+++++| |+-.+.... ..
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN 183 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGN 183 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBST
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchh
Confidence 3377888888876543 3599999999764322 02322 2333444 999999998 332222111 23
Q ss_pred CChHHHHHH---HHHHHHHhCC--cceEEEEEehhHHHHHHHHHhC--cccccceEEEcccCC
Q 022253 93 RTASFQAEC---MAKGLRKLGV--EKCTLVGVSYGGMVGFKMAEMY--PDLVESMVVTCSVMG 148 (300)
Q Consensus 93 ~~~~~~~~~---~~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~--p~~v~~~vl~~~~~~ 148 (300)
..+.++... +.+-|...|. ++|.|+|||.||..+...+..- ...++++|+.++...
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 334444333 3333334444 4799999999998887766542 246999999998543
No 188
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.95 E-value=8.7e-05 Score=58.29 Aligned_cols=102 Identities=18% Similarity=0.136 Sum_probs=76.0
Q ss_pred CceEEEEcCCCCCchhhHHH---HHHhhhcC--ceEEeecCCCCCCCCCCC----------CCCChHHHHHHHHHHHHHh
Q 022253 45 KHAVVLLHPFGFDGILTWQF---QVLALAKT--YEVYVPDFLFFGSSVTDR----------PDRTASFQAECMAKGLRKL 109 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~---~~~~l~~~--~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~~~i~~~ 109 (300)
+.||+|.-|.-++-+ .|.. ++..++.. .-++..+.|-+|+|.+-. ...+.++..+|...++..+
T Consensus 80 ~gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred CCceEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 367999999888766 5543 34445544 678889999999986432 2245667778888888777
Q ss_pred CC------cceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 110 GV------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 110 ~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
+. .+|+.+|-|+||++|..+=.+||..|.|.+..+.+.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 43 389999999999999999999999888876655543
No 189
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.87 E-value=0.0005 Score=52.16 Aligned_cols=105 Identities=13% Similarity=0.050 Sum_probs=59.1
Q ss_pred CCCceEEEEcCCC--CCchhhHHHHHHhhhcC----ceEEeecCCCCCC-C-CCCCCCCChHHHHHHHHHHHHHh-----
Q 022253 43 TKKHAVVLLHPFG--FDGILTWQFQVLALAKT----YEVYVPDFLFFGS-S-VTDRPDRTASFQAECMAKGLRKL----- 109 (300)
Q Consensus 43 ~~~~~vv~lhG~~--~~~~~~~~~~~~~l~~~----~~v~~~d~~G~G~-s-~~~~~~~~~~~~~~~~~~~i~~~----- 109 (300)
.+-|.++++||-. .+.. .+..+-..+++. -.++.+|.----. . ...........+++++.-.++..
T Consensus 96 ~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred ccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 3568899999832 1222 233333333333 4455555321000 0 00001122333344444444433
Q ss_pred CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
..+.-+|.|.|+||.+++..+.++|+++-.++..+|...
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 123468999999999999999999999999888887654
No 190
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.85 E-value=3.4e-05 Score=44.11 Aligned_cols=42 Identities=26% Similarity=0.386 Sum_probs=25.0
Q ss_pred CcccceeecCCCeEEEEEc-cCC------CCCCceEEEEcCCCCCchhhH
Q 022253 20 GMTQRTIEIEPGTILNIWV-PKK------TTKKHAVVLLHPFGFDGILTW 62 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~-~~~------~~~~~~vv~lhG~~~~~~~~~ 62 (300)
..+++.+.+.||..|..+. +.+ ...+|+|++.||+.+++. .|
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 3578889999999887643 322 146899999999999998 77
No 191
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.78 E-value=3e-05 Score=58.49 Aligned_cols=105 Identities=14% Similarity=0.021 Sum_probs=52.0
Q ss_pred CCCceEEEEcCCCCCch--hhHHHHHHhhhc---CceEEeecCCCCCCCC-CCC-CCCChHHHHHHHHHHHHHhC--Ccc
Q 022253 43 TKKHAVVLLHPFGFDGI--LTWQFQVLALAK---TYEVYVPDFLFFGSSV-TDR-PDRTASFQAECMAKGLRKLG--VEK 113 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~---~~~v~~~d~~G~G~s~-~~~-~~~~~~~~~~~~~~~i~~~~--~~~ 113 (300)
++..|||+.||+|++.. .....+...+.+ ...|.+++.- -+.++ ... --......++.+.+.++... .+-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 34568999999997642 134444433333 3556666642 21110 000 00223344444555444421 146
Q ss_pred eEEEEEehhHHHHHHHHHhCcc-cccceEEEcccCC
Q 022253 114 CTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVMG 148 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~ 148 (300)
++++|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 9999999999999999999865 5999999988643
No 192
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0023 Score=52.17 Aligned_cols=105 Identities=16% Similarity=0.005 Sum_probs=69.5
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHh-------------------hhcCceEEeec-CCCCCCCCC--CCCCCChHHHHH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLA-------------------LAKTYEVYVPD-FLFFGSSVT--DRPDRTASFQAE 100 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~-------------------l~~~~~v~~~d-~~G~G~s~~--~~~~~~~~~~~~ 100 (300)
.+.|.++++.|.+|.+. .|..+.+. +-..-.++.+| .-|.|.|.. .....+.....+
T Consensus 99 ~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 46899999999999988 77665321 11124689999 558888874 223344444555
Q ss_pred HHHHHHHHh-------C--CcceEEEEEehhHHHHHHHHHhCcc---cccceEEEcccCC
Q 022253 101 CMAKGLRKL-------G--VEKCTLVGVSYGGMVGFKMAEMYPD---LVESMVVTCSVMG 148 (300)
Q Consensus 101 ~~~~~i~~~-------~--~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 148 (300)
|+..+.+.+ . ..+.+|+|.|+||.-+-.+|...-+ ..++++++.+...
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 555554432 2 2489999999999988888865433 3566776666543
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.00083 Score=47.98 Aligned_cols=106 Identities=26% Similarity=0.298 Sum_probs=62.8
Q ss_pred CCCceEEEEcCCCCCchhhHHH---------------HH-HhhhcCceEEeecCCC---CCCCCCCC--CCCChHHHHH-
Q 022253 43 TKKHAVVLLHPFGFDGILTWQF---------------QV-LALAKTYEVYVPDFLF---FGSSVTDR--PDRTASFQAE- 100 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~---------------~~-~~l~~~~~v~~~d~~G---~G~s~~~~--~~~~~~~~~~- 100 (300)
.+...+|+|||.|--..-.|.+ ++ +..+..|.|+..+.-- +-.+...+ ...+..+.+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3456899999988533224532 12 3344448888876431 11111111 1112222222
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcc--cccceEEEcccCC
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVTCSVMG 148 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~~~~~~ 148 (300)
....++.-...+.+.++.||.||...+.+..++|+ +|-++.+.+++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 22334444466789999999999999999999875 6777777777643
No 194
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.66 E-value=0.00016 Score=50.52 Aligned_cols=50 Identities=14% Similarity=-0.037 Sum_probs=35.7
Q ss_pred HHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhCcc----cccceEEEcccCC
Q 022253 99 AECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPD----LVESMVVTCSVMG 148 (300)
Q Consensus 99 ~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~~vl~~~~~~ 148 (300)
.+.+...++.. ...+++++|||+||.+|..++..... ....++.++++..
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444444443 56789999999999999999887654 4566777776654
No 195
>COG0627 Predicted esterase [General function prediction only]
Probab=97.66 E-value=0.00033 Score=54.64 Aligned_cols=107 Identities=18% Similarity=0.144 Sum_probs=66.1
Q ss_pred CCCceEEEEcCCCCCchhhHHHH--HHhhh-cC-ceEEeecC--------------CCCCCCCCCC---C-----CCChH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQ--VLALA-KT-YEVYVPDF--------------LFFGSSVTDR---P-----DRTAS 96 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~--~~~l~-~~-~~v~~~d~--------------~G~G~s~~~~---~-----~~~~~ 96 (300)
..-|+++++||..++.. .+..+ ++..+ .. ..++++|- .|-+.|-... . .+.++
T Consensus 52 ~~ipV~~~l~G~t~~~~-~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP-NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCEEEEeCCCCCCCC-ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678888999887743 22211 23333 33 56666522 2333221111 1 13333
Q ss_pred H-HHHHHHHHHHHhCC-----cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCCC
Q 022253 97 F-QAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (300)
Q Consensus 97 ~-~~~~~~~~i~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (300)
. +.+++-+.+++... ++..++||||||.=|+.+|.++|++++.+..+++.....
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 3 35666655554422 268899999999999999999999999999998887654
No 196
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.64 E-value=0.0019 Score=48.42 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=39.7
Q ss_pred HHHHHHHHHH---hCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 99 AECMAKGLRK---LGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 99 ~~~~~~~i~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
.+.+.-+++. ++.++-.++|||+||.+++.....+|+.+...++++|...
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 3444455554 2445689999999999999999999999999999998754
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.53 E-value=0.0003 Score=48.35 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
...+.+..+++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3455666666666667899999999999999888754
No 198
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.44 E-value=0.00089 Score=54.24 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=78.0
Q ss_pred CCCceEEEEcCCCCCchhhHHH----HHHhhhcC--ceEEeecCCCCCCCCCCC-------CCCChHHHHHHHHHHHHHh
Q 022253 43 TKKHAVVLLHPFGFDGILTWQF----QVLALAKT--YEVYVPDFLFFGSSVTDR-------PDRTASFQAECMAKGLRKL 109 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~----~~~~l~~~--~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~i~~~ 109 (300)
+++|..|+|-|=+.-.. .|.. ..-.++++ ..|+..++|-+|.|.+.. ...+..+...|+..+|+.+
T Consensus 84 ~~gPiFLmIGGEgp~~~-~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESD-KWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCC-CccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 56888888888665443 3321 12234444 789999999999885433 1246677789999999887
Q ss_pred CC-------cceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 110 GV-------EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 110 ~~-------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+. .|.+.+|-|+-|.++..+=..+|+.+.|.|.-+++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 32 2899999999999999999999999999887777654
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.36 E-value=0.0009 Score=55.82 Aligned_cols=86 Identities=12% Similarity=0.151 Sum_probs=54.6
Q ss_pred hHHHHHHhhhcC-ceEEeecCCCCCCCCCCC--CCCChHHHHHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHhC
Q 022253 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDR--PDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.|..+++.|.+. |. -.++.|....-+.. ....-+.+...+..+|+.. +.+|++|+||||||.+++.+....
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 678899999876 54 33333322221111 1112345555666666644 457999999999999999877632
Q ss_pred c---------------ccccceEEEcccCC
Q 022253 134 P---------------DLVESMVVTCSVMG 148 (300)
Q Consensus 134 p---------------~~v~~~vl~~~~~~ 148 (300)
. ..|++.|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 1 24889999988754
No 200
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.33 E-value=0.0016 Score=44.31 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=54.4
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCc-eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTY-EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
...||++-||+..+. ....++ +.+++ -++++|++.... +.++. ..+.+.+|++|||-
T Consensus 11 d~LIvyFaGwgtpps-~v~HLi--lpeN~dl~lcYDY~dl~l------dfDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 11 DHLIVYFAGWGTPPS-AVNHLI--LPENHDLLLCYDYQDLNL------DFDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred CEEEEEEecCCCCHH-HHhhcc--CCCCCcEEEEeehhhcCc------ccchh-------------hhhhhhhhhhhHHH
Confidence 348999999999888 666653 45554 467788874321 11111 13567799999999
Q ss_pred HHHHHHHHhCcccccceEEEcccC
Q 022253 124 MVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 124 ~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
.+|-++....+ +++.+.+++..
T Consensus 69 wvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCC
Confidence 99999887765 77777777654
No 201
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.32 E-value=0.0008 Score=49.90 Aligned_cols=51 Identities=18% Similarity=0.020 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC----cccccceEEEcccCC
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY----PDLVESMVVTCSVMG 148 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~----p~~v~~~vl~~~~~~ 148 (300)
..++-+..+++..+ +++.+.|||.||.+|..+|... .++|.++...+++..
T Consensus 70 ~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 70 SALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 33455555666555 4699999999999999998874 357888888888754
No 202
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.30 E-value=0.041 Score=41.02 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=58.3
Q ss_pred CCceEEEEcCCC--CCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHH----HHHHHHh----CC-
Q 022253 44 KKHAVVLLHPFG--FDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECM----AKGLRKL----GV- 111 (300)
Q Consensus 44 ~~~~vv~lhG~~--~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~----~~~i~~~----~~- 111 (300)
+.-.|=|+-|.. ....-.|+.+.+.|+++ |.|++.-+.- ..+....++.+ ...++.+ +.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 344556666643 23335889999999998 9999986641 12222222222 1222222 21
Q ss_pred ---cceEEEEEehhHHHHHHHHHhCcccccceEEEccc
Q 022253 112 ---EKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 112 ---~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
-|++-+|||+|+-+-+.+...++..-++-++++-.
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 26778999999999888887776555677777654
No 203
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.28 E-value=0.024 Score=51.53 Aligned_cols=97 Identities=16% Similarity=0.215 Sum_probs=68.0
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCC-CCCCCCChHHHHHHHHHHHHHhC-CcceEEEEEe
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSV-TDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVS 120 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S 120 (300)
...|++.|+|.+-+... .+..++..|. .|.+|.-. ..-+..+++..++....-++++. ..|..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 46899999999988777 6666665553 23344322 22244677777777666666664 4589999999
Q ss_pred hhHHHHHHHHHhCc--ccccceEEEcccCCC
Q 022253 121 YGGMVGFKMAEMYP--DLVESMVVTCSVMGL 149 (300)
Q Consensus 121 ~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~~ 149 (300)
+|+.++..+|.... +....+|++++.+.+
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999987543 345669999887653
No 204
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.19 E-value=0.0011 Score=43.12 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=28.2
Q ss_pred ccCcccceeecCCCeEEEEEccC-CCCCCceEEEEcCCCCCchhhHHHH
Q 022253 18 LVGMTQRTIEIEPGTILNIWVPK-KTTKKHAVVLLHPFGFDGILTWQFQ 65 (300)
Q Consensus 18 ~~~~~~~~i~~~~g~~l~~~~~~-~~~~~~~vv~lhG~~~~~~~~~~~~ 65 (300)
.+.+.....++ +|..||+.... ..++..||||+||++++-. .|..+
T Consensus 65 lN~~phf~t~I-~g~~iHFih~rs~~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 65 LNSFPHFKTEI-DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp HTTS-EEEEEE-TTEEEEEEEE--S-TT-EEEEEE--SS--GG-GGHHH
T ss_pred HHcCCCeeEEE-eeEEEEEEEeeCCCCCCeEEEEECCCCccHH-hHHhh
Confidence 44566666777 79999986544 3356779999999999988 66654
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.17 E-value=0.002 Score=50.87 Aligned_cols=86 Identities=22% Similarity=0.089 Sum_probs=64.8
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCcceEEEE
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVG 118 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~lvG 118 (300)
+...-||+.|=|+... .=..+...|.++ +.|+.+|-.-+=- ...+.+..++|+..+++.. +..++.|+|
T Consensus 259 sd~~av~~SGDGGWr~-lDk~v~~~l~~~gvpVvGvdsLRYfW-----~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRD-LDKEVAEALQKQGVPVVGVDSLRYFW-----SERTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhh-hhHHHHHHHHHCCCceeeeehhhhhh-----ccCCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 4556678888776665 556778999998 9999999553332 3357888999999988765 567999999
Q ss_pred EehhHHHHHHHHHhCcc
Q 022253 119 VSYGGMVGFKMAEMYPD 135 (300)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~ 135 (300)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999887766555554
No 206
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.11 E-value=0.0009 Score=53.90 Aligned_cols=83 Identities=18% Similarity=0.169 Sum_probs=53.5
Q ss_pred hHHHHHHhhhcC-ce------EEeecCCCCCCCCCCCCCCChHHHHHHHHHHHH----HhCCcceEEEEEehhHHHHHHH
Q 022253 61 TWQFQVLALAKT-YE------VYVPDFLFFGSSVTDRPDRTASFQAECMAKGLR----KLGVEKCTLVGVSYGGMVGFKM 129 (300)
Q Consensus 61 ~~~~~~~~l~~~-~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~----~~~~~~~~lvG~S~Gg~~a~~~ 129 (300)
.|..+++.|..- |. -..+|+|= |- ......+.+...++..++ .-+.+|++||+||||+.+.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~--~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SY--HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---cc--CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 777888887654 43 45577772 11 011123344444444444 3466899999999999999999
Q ss_pred HHhCcc--------cccceEEEcccCC
Q 022253 130 AEMYPD--------LVESMVVTCSVMG 148 (300)
Q Consensus 130 a~~~p~--------~v~~~vl~~~~~~ 148 (300)
...+++ .|++++-++++..
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchhc
Confidence 988776 3667776665543
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.00 E-value=0.0015 Score=49.16 Aligned_cols=24 Identities=25% Similarity=0.171 Sum_probs=20.2
Q ss_pred CCcceEEEEEehhHHHHHHHHHhC
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 446899999999999999888753
No 208
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.067 Score=42.39 Aligned_cols=65 Identities=14% Similarity=0.247 Sum_probs=51.3
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHhC---CCceEEEEcCCCCcccc-cChHHHHHHHHHHHhhcccc
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQVG---QNATMESIEKAGHLVNL-ERPFVYNRQLKTILASLVHA 295 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~~ 295 (300)
..+.+.+++..|.++|.+..+++.+... .+++.+-+.++-|..++ ..|..+.+...+|+++....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 3457888899999999998888855443 24566667788998877 69999999999999987543
No 209
>PLN02162 triacylglycerol lipase
Probab=96.82 E-value=0.0039 Score=50.67 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
...+.+.++++.....++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34455566666655568999999999999998765
No 210
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.81 E-value=0.0059 Score=43.31 Aligned_cols=53 Identities=28% Similarity=0.113 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhC-----CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 96 SFQAECMAKGLRKLG-----VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+.-+.+|..+++.+. ..++.++|||+|+.++-.++...+..+..+++++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 444667777777663 23689999999999999888776678999999987754
No 211
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.77 E-value=0.0031 Score=49.98 Aligned_cols=86 Identities=24% Similarity=0.207 Sum_probs=52.2
Q ss_pred CCCceEEEEcCCCC-CchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC---CCCChHHHHHHHHHHHHHhCCcceEEEE
Q 022253 43 TKKHAVVLLHPFGF-DGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR---PDRTASFQAECMAKGLRKLGVEKCTLVG 118 (300)
Q Consensus 43 ~~~~~vv~lhG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~lvG 118 (300)
+.+-.+|+.||+-+ +.. .|...+....+.+.=..+..+|+-...... -..--+..++++.+.+....++++-.+|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 34568999999988 455 787777777666222233334432222111 1111223355566655556678999999
Q ss_pred EehhHHHHHHH
Q 022253 119 VSYGGMVGFKM 129 (300)
Q Consensus 119 ~S~Gg~~a~~~ 129 (300)
||+||.++-.+
T Consensus 157 hSLGGLvar~A 167 (405)
T KOG4372|consen 157 HSLGGLVARYA 167 (405)
T ss_pred eecCCeeeeEE
Confidence 99999876543
No 212
>PLN00413 triacylglycerol lipase
Probab=96.75 E-value=0.005 Score=50.20 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
...+.+..+++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45567777777776678999999999999998875
No 213
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.71 E-value=0.27 Score=40.57 Aligned_cols=113 Identities=13% Similarity=0.106 Sum_probs=71.5
Q ss_pred CCeEEE-EEccCCCCCCceEEEEcCCCCCchhhHHH--HHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 022253 30 PGTILN-IWVPKKTTKKHAVVLLHPFGFDGILTWQF--QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL 106 (300)
Q Consensus 30 ~g~~l~-~~~~~~~~~~~~vv~lhG~~~~~~~~~~~--~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i 106 (300)
.+..+. |..||+ -+.|..|.+.|+-. .+ .|.. +++.|.. --.+.-|.|=-|.+=......-.....+-|.+.+
T Consensus 274 ~reEi~yYFnPGD-~KPPL~VYFSGyR~-aE-GFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L 349 (511)
T TIGR03712 274 KRQEFIYYFNPGD-FKPPLNVYFSGYRP-AE-GFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKL 349 (511)
T ss_pred CCCeeEEecCCcC-CCCCeEEeeccCcc-cC-cchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHH
Confidence 344444 455554 45677899999876 34 4443 3455533 3455567776665533222222344566777788
Q ss_pred HHhCCc--ceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 107 RKLGVE--KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 107 ~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
+.|+.+ .++|-|-|||..-|+.+++... ..++|+.-|...
T Consensus 350 ~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 350 DYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 888765 6999999999999999998763 356666555544
No 214
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.68 E-value=0.02 Score=49.26 Aligned_cols=119 Identities=16% Similarity=0.107 Sum_probs=67.8
Q ss_pred CCeEEEEEccCCCCC--CceEEEEcCCCCCchh--hHHHH--HHhhhcC-ceEEeecCC----CCCCCC--CCCCCCChH
Q 022253 30 PGTILNIWVPKKTTK--KHAVVLLHPFGFDGIL--TWQFQ--VLALAKT-YEVYVPDFL----FFGSSV--TDRPDRTAS 96 (300)
Q Consensus 30 ~g~~l~~~~~~~~~~--~~~vv~lhG~~~~~~~--~~~~~--~~~l~~~-~~v~~~d~~----G~G~s~--~~~~~~~~~ 96 (300)
|...+..+.+..... .|++|++||.+-.... .+... ...+..+ .-|+++.+| |+.... ..+....+.
T Consensus 95 DCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 95 DCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF 174 (545)
T ss_pred CCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH
Confidence 666777777655333 6999999998643330 22111 1222222 667777777 322221 123444444
Q ss_pred HHHHH---HHHHHHHhC--CcceEEEEEehhHHHHHHHHHh--CcccccceEEEcccCC
Q 022253 97 FQAEC---MAKGLRKLG--VEKCTLVGVSYGGMVGFKMAEM--YPDLVESMVVTCSVMG 148 (300)
Q Consensus 97 ~~~~~---~~~~i~~~~--~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~~vl~~~~~~ 148 (300)
++... +.+-|...+ .++|.++|||.||..+..+... ....+.++|..++...
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 44433 444444444 3579999999999988766642 1245667777666543
No 215
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.59 E-value=0.0061 Score=44.22 Aligned_cols=68 Identities=16% Similarity=0.045 Sum_probs=44.3
Q ss_pred HHhhhcCceEEeecCCCCCCCCCC-----C----CCCChHHHHHHHHHHHHHhC-CcceEEEEEehhHHHHHHHHHhC
Q 022253 66 VLALAKTYEVYVPDFLFFGSSVTD-----R----PDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 66 ~~~l~~~~~v~~~d~~G~G~s~~~-----~----~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+..|....+|+++=+|-....... . ......+..+....++++.+ .++++|+|||.|+.++.++..++
T Consensus 39 as~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344555588999988853222111 1 11334444555566666664 46999999999999999998765
No 216
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.57 E-value=0.015 Score=45.60 Aligned_cols=62 Identities=10% Similarity=0.113 Sum_probs=48.9
Q ss_pred CCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 228 PHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
.++..|-.++.+..|.+.+++.+...++.+|+...+..+|+..|... +..+.+.+..|+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999997778889999999764 333445555555543
No 217
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.55 E-value=0.0076 Score=43.20 Aligned_cols=74 Identities=14% Similarity=0.022 Sum_probs=43.2
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCcceEEEEEehhHHHHHHHHHh------CcccccceEE
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGVSYGGMVGFKMAEM------YPDLVESMVV 142 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~~vl 142 (300)
..+..+++|-..... .-..+...-++++...++.. ...+++|+|+|.||.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 677777877432211 00112233344444444433 44689999999999999999877 2357889999
Q ss_pred EcccCC
Q 022253 143 TCSVMG 148 (300)
Q Consensus 143 ~~~~~~ 148 (300)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 887654
No 218
>PLN02571 triacylglycerol lipase
Probab=96.55 E-value=0.0045 Score=49.83 Aligned_cols=37 Identities=19% Similarity=0.086 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHh
Q 022253 96 SFQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 132 (300)
+++.+++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44566777777766433 68999999999999988864
No 219
>PLN02454 triacylglycerol lipase
Probab=96.54 E-value=0.0051 Score=49.51 Aligned_cols=33 Identities=24% Similarity=0.145 Sum_probs=23.5
Q ss_pred HHHHHHHHHhCCcc--eEEEEEehhHHHHHHHHHh
Q 022253 100 ECMAKGLRKLGVEK--CTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 100 ~~~~~~i~~~~~~~--~~lvG~S~Gg~~a~~~a~~ 132 (300)
..|..+++.....+ +++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34444444443333 9999999999999998854
No 220
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.33 E-value=0.0083 Score=47.83 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=79.2
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC---CCCChHHHHHHHHHHHHHhC---CcceEE
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR---PDRTASFQAECMAKGLRKLG---VEKCTL 116 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~i~~~~---~~~~~l 116 (300)
.+.|+|+..-|.+.+..+........|. -+-+.+++|-+|.|...+ ...++++.+.|...+++.++ .++.+-
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 3678999999988765523333344443 488899999999998765 33788889999998888874 357888
Q ss_pred EEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 117 VGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 117 vG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
-|-|-||+.++.+=.-+|+-|++.|..-.+.
T Consensus 139 TG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred cCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 9999999999988888899999988665543
No 221
>PLN02408 phospholipase A1
Probab=96.32 E-value=0.0079 Score=47.75 Aligned_cols=36 Identities=28% Similarity=0.234 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHhC
Q 022253 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
..++|..+++..... ++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345666666665433 589999999999999888653
No 222
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.20 E-value=0.02 Score=45.32 Aligned_cols=40 Identities=30% Similarity=0.317 Sum_probs=31.9
Q ss_pred CCcceEEEEEehhHHHHHHHHHhCcc-----cccceEEEcccCCC
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAEMYPD-----LVESMVVTCSVMGL 149 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~ 149 (300)
+.+|+.|||||+|+.+...+.....+ .|+.+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66799999999999998887765443 38889999876653
No 223
>PLN02934 triacylglycerol lipase
Probab=96.11 E-value=0.011 Score=48.72 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
......+..+++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566777777766678999999999999998874
No 224
>PLN02310 triacylglycerol lipase
Probab=96.03 E-value=0.021 Score=46.05 Aligned_cols=37 Identities=16% Similarity=0.070 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhC----CcceEEEEEehhHHHHHHHHHh
Q 022253 96 SFQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~----~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
++..+.+..+++... .-++.+.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344566677776552 1368999999999999988854
No 225
>PLN02324 triacylglycerol lipase
Probab=95.92 E-value=0.015 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHh
Q 022253 98 QAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 132 (300)
..++|..+++..... ++.+.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345566666665432 68999999999999988864
No 226
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.91 E-value=0.12 Score=37.06 Aligned_cols=61 Identities=10% Similarity=0.051 Sum_probs=45.3
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHh---C-CCceEEEEcCCCCcccccC---hHHHHHHHHHHHhh
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQV---G-QNATMESIEKAGHLVNLER---PFVYNRQLKTILAS 291 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 291 (300)
+++++-|-|+.|.+....+.....+.. | .....++.+|+||+-.+.- .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 457788999999999887766655543 3 2345677889999977643 36788899999875
No 227
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.87 E-value=0.025 Score=39.26 Aligned_cols=111 Identities=10% Similarity=0.006 Sum_probs=65.0
Q ss_pred EEEEEccCCCCCCceEEEEcCCCCCchhhHHHH------HHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHH----HHH
Q 022253 33 ILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQ------VLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQ----AEC 101 (300)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~------~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~----~~~ 101 (300)
.+.+...|. .+.+||+++-.++.-. .|..+ ++.+... ...++++ |...-+.-.......+. .+-
T Consensus 16 dMel~ryGH--aG~pVvvFpts~Grf~-eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~Ay 90 (227)
T COG4947 16 DMELNRYGH--AGIPVVVFPTSGGRFN-EYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAY 90 (227)
T ss_pred hhhhhhccC--CCCcEEEEecCCCcch-hhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHH
Confidence 444444553 5667777777776666 55443 3444444 4555554 22211111111222222 222
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
-.-++++.-....++-|.||||..|..+.-++|+.+.++|.+++...
T Consensus 91 erYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 91 ERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 22334443334567889999999999999999999999999998754
No 228
>PLN02802 triacylglycerol lipase
Probab=95.70 E-value=0.021 Score=47.18 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCc--ceEEEEEehhHHHHHHHHHhC
Q 022253 97 FQAECMAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+..+++..+++....+ ++++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445566666655432 689999999999999887643
No 229
>PLN02753 triacylglycerol lipase
Probab=95.56 E-value=0.025 Score=46.95 Aligned_cols=36 Identities=19% Similarity=0.115 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCC-----cceEEEEEehhHHHHHHHHHh
Q 022253 97 FQAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~-----~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
+..+.|..+++.... -++.+.|||+||.+|+..|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344556666665532 479999999999999988853
No 230
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.48 E-value=0.027 Score=46.70 Aligned_cols=36 Identities=19% Similarity=0.114 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhC----CcceEEEEEehhHHHHHHHHHh
Q 022253 97 FQAECMAKGLRKLG----VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 97 ~~~~~~~~~i~~~~----~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
+..++|..+++... ..++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44567777776653 1368999999999999988854
No 231
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.43 E-value=0.11 Score=40.20 Aligned_cols=124 Identities=15% Similarity=0.068 Sum_probs=79.6
Q ss_pred eeecCCCeEEEEEcc----CCCCCCceEEEEcCCCCCchhhHHHHHH---h----------hhcCceEEeecCC-CCCCC
Q 022253 25 TIEIEPGTILNIWVP----KKTTKKHAVVLLHPFGFDGILTWQFQVL---A----------LAKTYEVYVPDFL-FFGSS 86 (300)
Q Consensus 25 ~i~~~~g~~l~~~~~----~~~~~~~~vv~lhG~~~~~~~~~~~~~~---~----------l~~~~~v~~~d~~-G~G~s 86 (300)
++.+.++..+.+|.. ..+...|..+.+.|.++.+...|..+-+ . .-+...++.+|-| |.|.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS 86 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee
Confidence 445556766665433 2234578889999987755423333211 0 1123577888877 67766
Q ss_pred CCCCCC---CChHHHHHHHHHHHHHh-------CCcceEEEEEehhHHHHHHHHHhCcc---------cccceEEEcccC
Q 022253 87 VTDRPD---RTASFQAECMAKGLRKL-------GVEKCTLVGVSYGGMVGFKMAEMYPD---------LVESMVVTCSVM 147 (300)
Q Consensus 87 ~~~~~~---~~~~~~~~~~~~~i~~~-------~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~vl~~~~~ 147 (300)
--.... .+..+.+.|+.++++.+ ...|++|+..|+||-+|..++...-+ .+.+++|-+++.
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 433322 45677899999999876 34589999999999999888764322 356777777665
Q ss_pred C
Q 022253 148 G 148 (300)
Q Consensus 148 ~ 148 (300)
.
T Consensus 167 S 167 (414)
T KOG1283|consen 167 S 167 (414)
T ss_pred C
Confidence 4
No 232
>PLN02719 triacylglycerol lipase
Probab=95.40 E-value=0.03 Score=46.31 Aligned_cols=35 Identities=20% Similarity=0.171 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCC-----cceEEEEEehhHHHHHHHHHh
Q 022253 98 QAECMAKGLRKLGV-----EKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 98 ~~~~~~~~i~~~~~-----~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
..+.|..+++.... .++.+.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555666655432 279999999999999988854
No 233
>PLN02761 lipase class 3 family protein
Probab=95.33 E-value=0.033 Score=46.18 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhC------CcceEEEEEehhHHHHHHHHH
Q 022253 97 FQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 97 ~~~~~~~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
++.+.|..+++... .-++.+.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34556666666552 126999999999999998875
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.02 E-value=0.37 Score=40.60 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=57.5
Q ss_pred HHHhhhcCceEEeecCCCCCCCCC---CCCCCChHHH-----------HHHHHHHHHHh---CCcceEEEEEehhHHHHH
Q 022253 65 QVLALAKTYEVYVPDFLFFGSSVT---DRPDRTASFQ-----------AECMAKGLRKL---GVEKCTLVGVSYGGMVGF 127 (300)
Q Consensus 65 ~~~~l~~~~~v~~~d~~G~G~s~~---~~~~~~~~~~-----------~~~~~~~i~~~---~~~~~~lvG~S~Gg~~a~ 127 (300)
+...+++.|.+.+-|- ||..+.. .....+.+.+ +.--+++++.. ..+.-+..|.|.||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4566777799999995 6765543 1111222222 22233444443 334678999999999999
Q ss_pred HHHHhCcccccceEEEcccCCC
Q 022253 128 KMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 128 ~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
..|.++|+.+++++.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999987653
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.82 E-value=0.054 Score=43.25 Aligned_cols=37 Identities=16% Similarity=-0.023 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHh
Q 022253 96 SFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667788888888887789999999999999988864
No 236
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.62 E-value=0.19 Score=42.33 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=59.8
Q ss_pred EEEEEccCCCCCCceEEEEcCCCC---CchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHH-
Q 022253 33 ILNIWVPKKTTKKHAVVLLHPFGF---DGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGL- 106 (300)
Q Consensus 33 ~l~~~~~~~~~~~~~vv~lhG~~~---~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i- 106 (300)
++..|....++++-.|+-+||.|. ++. .-....+..++. ..|+.+|+-=--+...| ...++..=...-+|
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSk-SHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP---RaleEv~fAYcW~in 459 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSK-SHEPYLRSWAQALGCPIISVDYSLAPEAPFP---RALEEVFFAYCWAIN 459 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccc-cccHHHHHHHHHhCCCeEEeeeccCCCCCCC---cHHHHHHHHHHHHhc
Confidence 344444444456668899999884 333 333444444444 78999997532222211 22222211111122
Q ss_pred --HHhC--CcceEEEEEehhHHHHHHHHHh----CcccccceEEEcccC
Q 022253 107 --RKLG--VEKCTLVGVSYGGMVGFKMAEM----YPDLVESMVVTCSVM 147 (300)
Q Consensus 107 --~~~~--~~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~ 147 (300)
..+| .++++++|-|.||.+.+..|.+ .-...+|+++.-++.
T Consensus 460 n~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 460 NCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred CHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2233 3699999999999876555443 222246777766553
No 237
>PLN02847 triacylglycerol lipase
Probab=94.39 E-value=0.083 Score=44.65 Aligned_cols=22 Identities=27% Similarity=0.265 Sum_probs=18.6
Q ss_pred CcceEEEEEehhHHHHHHHHHh
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
.-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3479999999999999988764
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.58 E-value=0.29 Score=37.23 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=26.6
Q ss_pred HHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcc
Q 022253 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (300)
Q Consensus 106 i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (300)
.+.....++.+-|||+||.+|..+..++. +..+.+-+|
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33334568999999999999999888774 334444443
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.58 E-value=0.29 Score=37.23 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=26.6
Q ss_pred HHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcc
Q 022253 106 LRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (300)
Q Consensus 106 i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (300)
.+.....++.+-|||+||.+|..+..++. +..+.+-+|
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33334568999999999999999888774 334444443
No 240
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=92.33 E-value=1.9 Score=27.48 Aligned_cols=82 Identities=16% Similarity=0.175 Sum_probs=55.7
Q ss_pred hHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCCh-HHHHHHHHHHHHHhCCcceEEEEEehhH--HHHHHHHHhCccc
Q 022253 61 TWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTA-SFQAECMAKGLRKLGVEKCTLVGVSYGG--MVGFKMAEMYPDL 136 (300)
Q Consensus 61 ~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~lvG~S~Gg--~~a~~~a~~~p~~ 136 (300)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.....++++||-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 566666777665 76666777766554332211122 3556778889999988999999999654 3444577889999
Q ss_pred ccceEE
Q 022253 137 VESMVV 142 (300)
Q Consensus 137 v~~~vl 142 (300)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 988754
No 241
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.26 E-value=0.88 Score=34.07 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhC
Q 022253 93 RTASFQAECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.+..+=++.+.+.++.. ..++++++|+|+|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 44555556666666652 336899999999999998877653
No 242
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.73 E-value=1.1 Score=37.42 Aligned_cols=42 Identities=24% Similarity=0.288 Sum_probs=32.8
Q ss_pred hCCcceEEEEEehhHHHHHHHHHhC-----cccccceEEEcccCCCC
Q 022253 109 LGVEKCTLVGVSYGGMVGFKMAEMY-----PDLVESMVVTCSVMGLT 150 (300)
Q Consensus 109 ~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~~~~ 150 (300)
+|.+|+.|||+|+|+-+...+...- -..|..+++++.+....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 4788999999999999988776532 23588899999877643
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.62 E-value=0.74 Score=39.05 Aligned_cols=50 Identities=18% Similarity=0.252 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhC---CcceEEEEEehhHHHHHHHHHh-----Ccc------cccceEEEcccCC
Q 022253 99 AECMAKGLRKLG---VEKCTLVGVSYGGMVGFKMAEM-----YPD------LVESMVVTCSVMG 148 (300)
Q Consensus 99 ~~~~~~~i~~~~---~~~~~lvG~S~Gg~~a~~~a~~-----~p~------~v~~~vl~~~~~~ 148 (300)
...+...++..+ .++++.+||||||.++=.+... .|+ .-.|+|+++.+..
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 344444444443 4589999999999887765543 233 2567777776643
No 244
>PF03283 PAE: Pectinacetylesterase
Probab=88.74 E-value=12 Score=30.58 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=23.8
Q ss_pred CcceEEEEEehhHHHHHHHHH----hCcccccceEEEcccC
Q 022253 111 VEKCTLVGVSYGGMVGFKMAE----MYPDLVESMVVTCSVM 147 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~vl~~~~~ 147 (300)
.++++|.|.|.||.-++..+. ..|..++-..+.++..
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 357999999999998886554 3454333344444433
No 245
>PRK12467 peptide synthase; Provisional
Probab=87.44 E-value=3.7 Score=44.79 Aligned_cols=98 Identities=14% Similarity=-0.056 Sum_probs=68.7
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CcceEEEEEehhH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S~Gg 123 (300)
.+.+++.|...++.. .+..+...|.....++.+..++.-.... ...+++..+....+.+.... ..+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~-~~~~l~~~l~~~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVF-DYEPLAVILEGDRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchh-hhHHHHHHhCCCCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 456999999999988 8888888887777888887765432222 23456666666666666553 3578999999999
Q ss_pred HHHHHHHHh---CcccccceEEEcc
Q 022253 124 MVGFKMAEM---YPDLVESMVVTCS 145 (300)
Q Consensus 124 ~~a~~~a~~---~p~~v~~~vl~~~ 145 (300)
.++..++.. ..+.+.-+.+++.
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEec
Confidence 999988764 3344555555543
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=85.95 E-value=1.7 Score=36.83 Aligned_cols=63 Identities=19% Similarity=0.077 Sum_probs=47.8
Q ss_pred cceEEEEeeCCCcccCHHHHHHHHHHhC----C-------CceEEEEcCCCCccccc--ChHHHHHHHHHHHhhcc
Q 022253 231 SQKIHLLWGENDKIFDMQVARNLKEQVG----Q-------NATMESIEKAGHLVNLE--RPFVYNRQLKTILASLV 293 (300)
Q Consensus 231 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~ 293 (300)
..++++.||..|.++++..+..+++++. . -.++..+||.+|+.--. .+-.....|.+|+++-.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 4589999999999999876665555442 1 25788999999986543 45578899999998654
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.11 E-value=14 Score=28.89 Aligned_cols=22 Identities=27% Similarity=0.354 Sum_probs=19.0
Q ss_pred CcceEEEEEehhHHHHHHHHHh
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
.+++.++|.|-||..|-.+|..
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cceEEEEecCccHHHHHHHHHH
Confidence 4579999999999999988854
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=81.86 E-value=1.6 Score=29.14 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=17.1
Q ss_pred CCCCceEEEEcCCCCCchhhH
Q 022253 42 TTKKHAVVLLHPFGFDGILTW 62 (300)
Q Consensus 42 ~~~~~~vv~lhG~~~~~~~~~ 62 (300)
.+.+|.|+-+||+.|+.. .|
T Consensus 49 ~p~KpLVlSfHG~tGtGK-n~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGK-NF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcH-HH
Confidence 367899999999999998 55
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=80.03 E-value=2.5 Score=33.27 Aligned_cols=29 Identities=31% Similarity=0.358 Sum_probs=23.6
Q ss_pred HHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 103 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
.++++..|.++-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 34556778899999999999998887664
No 250
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.57 E-value=1.5 Score=34.90 Aligned_cols=30 Identities=27% Similarity=0.428 Sum_probs=24.0
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+.++++..|++|-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 445667778899999999999888886654
No 251
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=78.86 E-value=2.9 Score=32.90 Aligned_cols=30 Identities=20% Similarity=0.141 Sum_probs=23.8
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+.++++..+.++..++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 344556678899999999999988887764
No 252
>PRK10279 hypothetical protein; Provisional
Probab=76.77 E-value=4.2 Score=32.07 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=26.7
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCc
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
+.+.+++.++..-.++|-|+|+.++..||....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 455566678888889999999999999997543
No 253
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=76.18 E-value=4.6 Score=32.00 Aligned_cols=62 Identities=19% Similarity=0.158 Sum_probs=40.9
Q ss_pred hHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 61 TWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 61 ~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.+..+++.|...-.-++++ | |.. -....--+.+.+++.++..-.++|-|+|+.++..+|...
T Consensus 3 d~~rl~r~l~~~~~gLvL~--G-GG~--------RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLG--G-GGA--------RGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEEC--C-hHH--------HHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 5677777887764444443 1 111 112233456666677888788999999999999999764
No 254
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=76.16 E-value=5.2 Score=28.52 Aligned_cols=33 Identities=30% Similarity=0.299 Sum_probs=25.8
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCc
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
+.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 444555557777889999999999999988653
No 255
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=75.98 E-value=42 Score=27.45 Aligned_cols=88 Identities=19% Similarity=0.132 Sum_probs=59.3
Q ss_pred CceEEEEcCCCCCch------hhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEE
Q 022253 45 KHAVVLLHPFGFDGI------LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVG 118 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~------~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG 118 (300)
...||++||-+.++. +.|..+++.+.++-.+-.+|.--+|.-++ .++.+.-+..++... +-.+|.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G------leeDa~~lR~~a~~~---~~~lva 241 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG------LEEDAYALRLFAEVG---PELLVA 241 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc------hHHHHHHHHHHHHhC---CcEEEE
Confidence 457999998765433 48999998888775566666654444332 444455555555443 338889
Q ss_pred EehhHHHHHHHHHhCcccccceEEEccc
Q 022253 119 VSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
.|+.-..++ |.+||-++.+++..
T Consensus 242 ~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 242 SSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred ehhhhhhhh-----hhhccceeEEEeCC
Confidence 998776655 67899999888653
No 256
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=75.06 E-value=4 Score=32.00 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=22.7
Q ss_pred HHHHHhC-CcceEEEEEehhHHHHHHHHHh
Q 022253 104 KGLRKLG-VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 104 ~~i~~~~-~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
.+++..+ +++..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 4445566 8899999999999888877643
No 257
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=74.80 E-value=5.5 Score=29.00 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=24.6
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+.+.+++.+...-.++|-|.||.++..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 44445555777778999999999999998754
No 258
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=73.88 E-value=34 Score=28.28 Aligned_cols=94 Identities=14% Similarity=0.027 Sum_probs=60.7
Q ss_pred EEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCC------------------------hHHHHHHHH
Q 022253 49 VLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRT------------------------ASFQAECMA 103 (300)
Q Consensus 49 v~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~------------------------~~~~~~~~~ 103 (300)
|++=|..+++...+.++.+.+.+. ..++.+|.-=.|....+. +.+ .+.+++-+.
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~-di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPP-DISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCC-CcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 444466666665888888888888 999999975444333221 111 122233344
Q ss_pred HHHHHh----CCcceEEEEEehhHHHHHHHHHhCcccccceEEE
Q 022253 104 KGLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVT 143 (300)
Q Consensus 104 ~~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~ 143 (300)
.++..+ .++-++-+|-|.|..++.......|=-+-++++.
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 444444 2456788999999999999998888666666643
No 259
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=73.00 E-value=24 Score=26.05 Aligned_cols=63 Identities=19% Similarity=0.205 Sum_probs=45.0
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEeh----hHHHHHHHHHhCc-ccccceEEE
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY----GGMVGFKMAEMYP-DLVESMVVT 143 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~----Gg~~a~~~a~~~p-~~v~~~vl~ 143 (300)
-+|+..|-++. ..++.+.+++.+.++++..+ -.++++|+|. |..++-++|.+.. ..+..++-+
T Consensus 78 d~V~~~~~~~~-------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAF-------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccc-------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 46777765532 33678889999999998877 5789999998 8888888887652 234444433
No 260
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=72.55 E-value=6.4 Score=30.51 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
-+.+.+++.++..-.+.|-|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 345556667877778999999999999999763
No 261
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=71.91 E-value=24 Score=29.94 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=59.8
Q ss_pred CCeEEEEEccCCC-CCCceEEEEcCCCCCch----hhHHHHHHhhhcC--ceEEeecCC----C---CCCCCCCCCCCCh
Q 022253 30 PGTILNIWVPKKT-TKKHAVVLLHPFGFDGI----LTWQFQVLALAKT--YEVYVPDFL----F---FGSSVTDRPDRTA 95 (300)
Q Consensus 30 ~g~~l~~~~~~~~-~~~~~vv~lhG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~----G---~G~s~~~~~~~~~ 95 (300)
|-.-+..|.++.+ .+..++|+|-|.|.-+. ..|+ .+.|+.. .-|+.+++| | .+..+..+.....
T Consensus 119 DCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl 196 (601)
T KOG4389|consen 119 DCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL 196 (601)
T ss_pred hceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch
Confidence 5566777888533 34557788888764222 1333 2345444 555566665 1 2122222222222
Q ss_pred HHH---HHHHHHHHHHhCC--cceEEEEEehhHHHHHH-HHH-hCcccccceEEEcccC
Q 022253 96 SFQ---AECMAKGLRKLGV--EKCTLVGVSYGGMVGFK-MAE-MYPDLVESMVVTCSVM 147 (300)
Q Consensus 96 ~~~---~~~~~~~i~~~~~--~~~~lvG~S~Gg~~a~~-~a~-~~p~~v~~~vl~~~~~ 147 (300)
-+. .+.+.+=|...|. .++.|+|.|.|+.-... +.+ .....++..|+-++..
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 222 3455555556654 47999999999864332 211 1112455556555443
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=71.72 E-value=7.8 Score=29.05 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=24.1
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+.+.+++.+.+.-.++|-|.|+.++..+|...
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 33444455667778999999999999998654
No 263
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=71.33 E-value=6.2 Score=31.29 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=26.9
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
-+.+.+++.++.+-.+.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345566667788889999999999999999854
No 264
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=70.49 E-value=8.4 Score=29.83 Aligned_cols=36 Identities=22% Similarity=0.111 Sum_probs=26.8
Q ss_pred ceEEEEEehhHHHHHHHHH---hCcccccceEEEcccCC
Q 022253 113 KCTLVGVSYGGMVGFKMAE---MYPDLVESMVVTCSVMG 148 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a~---~~p~~v~~~vl~~~~~~ 148 (300)
+++|.|.|+|++-+...-. ..-+++++.++.+|+..
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 7999999999886665432 23356999999988754
No 265
>COG3933 Transcriptional antiterminator [Transcription]
Probab=69.33 E-value=52 Score=27.57 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=56.5
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
.-..||.-||....+ +....+..|-..--+.++|+| -+.++.+..+.+.+.+++.+..+=.++=-.||.
T Consensus 108 ~v~vIiiAHG~sTAS--SmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 108 RVKVIIIAHGYSTAS--SMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred ceeEEEEecCcchHH--HHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 345789999987543 556677777666788999998 456788889999999999887775566678888
Q ss_pred HHHHHH
Q 022253 124 MVGFKM 129 (300)
Q Consensus 124 ~~a~~~ 129 (300)
.....=
T Consensus 177 L~~f~~ 182 (470)
T COG3933 177 LTSFGS 182 (470)
T ss_pred HHHHHH
Confidence 766543
No 266
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=68.53 E-value=9.3 Score=27.33 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=24.2
Q ss_pred HHHHHHhCCcceEEEEEehhHHHHHHHHHhCc
Q 022253 103 AKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 103 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 19 l~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 19 LRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34445556666788999999999999887654
No 267
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=67.84 E-value=3.7 Score=33.53 Aligned_cols=55 Identities=13% Similarity=0.157 Sum_probs=35.7
Q ss_pred eEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCccccc-----ChHHHHHHHHHHHh
Q 022253 233 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLE-----RPFVYNRQLKTILA 290 (300)
Q Consensus 233 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~ 290 (300)
.+++|+|++|+..-.. . .+-+.. .+..+.+.||++|...+. ..++....|.+|..
T Consensus 353 rmlFVYG~nDPW~A~~-f-~l~~g~-~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 353 RMLFVYGENDPWSAEP-F-RLGKGK-RDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred eEEEEeCCCCCcccCc-c-ccCCCC-cceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 5999999999875311 1 111111 367788889999986652 34456677777764
No 268
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=67.53 E-value=4.5 Score=33.69 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=27.4
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCccccc
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVE 138 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~ 138 (300)
+...+...++.+-++.|-|.|+.+|..++...++.+.
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 4444444566777899999999999999987665543
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.97 E-value=10 Score=28.20 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=25.7
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCc
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
+.+.+++.+...-.+.|.|.|+.++..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444555567666789999999999999998764
No 270
>PRK02399 hypothetical protein; Provisional
Probab=64.73 E-value=82 Score=26.21 Aligned_cols=95 Identities=17% Similarity=0.052 Sum_probs=60.0
Q ss_pred EEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC----------CCCC-------------hHHHHHHHHH
Q 022253 49 VLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR----------PDRT-------------ASFQAECMAK 104 (300)
Q Consensus 49 v~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~----------~~~~-------------~~~~~~~~~~ 104 (300)
|++=|..+++.+.+..+.+.+.+. ..|+.+|.-..|....+. ...+ .+.+.+-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 555577777765777777778776 999999984343221110 0011 1223334444
Q ss_pred HHHHh----CCcceEEEEEehhHHHHHHHHHhCcccccceEEE
Q 022253 105 GLRKL----GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVT 143 (300)
Q Consensus 105 ~i~~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~ 143 (300)
+++.+ .++-++-+|-|.|..++.......|--+-++++.
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 54443 3556888999999999999998888666666543
No 271
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=64.51 E-value=30 Score=24.11 Aligned_cols=57 Identities=18% Similarity=0.023 Sum_probs=34.8
Q ss_pred HHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHH
Q 022253 64 FQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKM 129 (300)
Q Consensus 64 ~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~ 129 (300)
.+...+.++-.|++.|.+|-- .+.+.+++.+..+-+ .|.+=.+++|-|.|=.-++..
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk~--------~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGKA--------LSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHhcCCCCeEEEEecCCCc--------CChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 345566666789999998743 344555655554433 343345678999886554443
No 272
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=64.05 E-value=6.1 Score=32.77 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccce
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESM 140 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~ 140 (300)
-+...+...+..+-++.|-|.|+.+|..+|...++.+..+
T Consensus 84 GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3444444456777789999999999999998766655444
No 273
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=63.43 E-value=9.7 Score=32.88 Aligned_cols=31 Identities=13% Similarity=0.171 Sum_probs=24.7
Q ss_pred HHHH-HHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 103 AKGL-RKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 103 ~~~i-~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.+++ +..|++|-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 577899999999999999888877644
No 274
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=63.30 E-value=60 Score=24.16 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-c-eEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEE
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-Y-EVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lv 117 (300)
+..+|++.||...++...|.-+-..|.+. | +|+....-|+- ..+++...++..+.+++.|+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cHHHHHHHHHHcCCceEEEe
Confidence 34466677777666653444433334443 4 44443333221 14455555555566655543
No 275
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=62.35 E-value=7 Score=32.07 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=29.1
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceE
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMV 141 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 141 (300)
+...+...+..+-++.|-|.|+.+|..+|...++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555577777899999999999999986655544443
No 276
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=62.03 E-value=17 Score=25.97 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=23.5
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+.+.+++.+...-.++|-|.|+.++..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33444445666668999999999999988654
No 277
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=61.65 E-value=43 Score=21.94 Aligned_cols=73 Identities=12% Similarity=0.038 Sum_probs=49.1
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CcceEEEEEehhH
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVSYGG 123 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S~Gg 123 (300)
.||.-|| .-+. .....++.+... -.+.++++. .+.+.+++.+.+.+.++.++ .+.+.++.-=.||
T Consensus 2 iii~sHG--~~A~-g~~~~~~~i~G~~~~~i~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAE-GLLESAEMILGEDQDNIEAVDLY---------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHH-HHHHHHHHHHTSTCSSEEEEEET---------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHH-HHHHHHHHHcCCCcccEEEEECc---------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 3344 566666666554 377777765 33578889999999998886 4566666666666
Q ss_pred HHHHHHHH
Q 022253 124 MVGFKMAE 131 (300)
Q Consensus 124 ~~a~~~a~ 131 (300)
.....++.
T Consensus 70 sp~n~a~~ 77 (116)
T PF03610_consen 70 SPFNEAAR 77 (116)
T ss_dssp HHHHHHHH
T ss_pred ccchHHHH
Confidence 55444443
No 278
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=61.56 E-value=9.1 Score=30.37 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=25.7
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHHhCccc
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL 136 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~ 136 (300)
+.+.+...+..+-++.|-|.|+.+|..++...++.
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~E 120 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEE 120 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 34444445777778999999999999998755443
No 279
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=59.79 E-value=29 Score=24.59 Aligned_cols=72 Identities=21% Similarity=0.170 Sum_probs=44.5
Q ss_pred EEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCC------CCCChHHHHHHHHHHHHHhCCcceEEEEEehh
Q 022253 49 VLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDR------PDRTASFQAECMAKGLRKLGVEKCTLVGVSYG 122 (300)
Q Consensus 49 v~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~G 122 (300)
|++-|.|++.. .-..++..|..+|.--.+-+|.--.|.... .++.++.. ...-++.++..-=+++|.|..
T Consensus 44 vl~cGNGgSaa-dAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAA-DAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchh-hHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 44557777777 777788787776666666665544442211 33555443 344556666666789999987
Q ss_pred HH
Q 022253 123 GM 124 (300)
Q Consensus 123 g~ 124 (300)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 74
No 280
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=58.85 E-value=8.3 Score=30.24 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=16.7
Q ss_pred CCCceEEEEcCCCCCchhhH
Q 022253 43 TKKHAVVLLHPFGFDGILTW 62 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~ 62 (300)
+.+|.++=+||+.|+.. .|
T Consensus 107 p~KPLvLSfHG~tGTGK-N~ 125 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGK-NY 125 (344)
T ss_pred CCCCeEEEecCCCCCch-hH
Confidence 68999999999999988 44
No 281
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=58.25 E-value=19 Score=27.88 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=24.6
Q ss_pred HHHHHHHhCCc-ceEEEEEehhHHHHHHHHHhCcc
Q 022253 102 MAKGLRKLGVE-KCTLVGVSYGGMVGFKMAEMYPD 135 (300)
Q Consensus 102 ~~~~i~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~ 135 (300)
+.+.+.+.+.. .-.++|-|.|+.++..++.....
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 34444444555 45789999999999999886544
No 282
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=54.61 E-value=9.8 Score=32.94 Aligned_cols=37 Identities=27% Similarity=0.340 Sum_probs=28.8
Q ss_pred eEEEEEehhHHHHHHHHHhCcc-cccceEEEcccCCCC
Q 022253 114 CTLVGVSYGGMVGFKMAEMYPD-LVESMVVTCSVMGLT 150 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~~p~-~v~~~vl~~~~~~~~ 150 (300)
++.-+.|-||..++..|.+..+ .|++++...|.....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 4556888999999999887644 699999988876543
No 283
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=53.67 E-value=0.54 Score=36.64 Aligned_cols=89 Identities=25% Similarity=0.145 Sum_probs=52.5
Q ss_pred CCCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecC----------CCCCCCCCCCCCCCh--------HHHHHHHH
Q 022253 43 TKKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDF----------LFFGSSVTDRPDRTA--------SFQAECMA 103 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~----------~G~G~s~~~~~~~~~--------~~~~~~~~ 103 (300)
..-|.+++.||+++... ........++.. +.++..+. +|++.+......... .....+..
T Consensus 47 ~~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 47 KKLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred ccCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 47889999999999888 655566667666 77766664 333332221111110 01111111
Q ss_pred HHHHHhCCcceEEEEEehhHHHHHHHHHhCc
Q 022253 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 104 ~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
..... ..+....|++.|+..+..++...+
T Consensus 126 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 126 LLGAS--LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHhhh--cCcceEEEEEeeccchHHHhhcch
Confidence 11111 257788888888888888877765
No 284
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.83 E-value=27 Score=26.47 Aligned_cols=33 Identities=24% Similarity=0.193 Sum_probs=23.8
Q ss_pred HHHHHHHhCCc--ceEEEEEehhHHHHHHHHHhCc
Q 022253 102 MAKGLRKLGVE--KCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 102 ~~~~i~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
+.+.+.+.++. ...++|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444455555 3479999999999999987653
No 285
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=52.33 E-value=22 Score=21.31 Aligned_cols=24 Identities=25% Similarity=0.423 Sum_probs=18.3
Q ss_pred CCcceEEEEEehhHHHHHHHHHhC
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
+.+++.++|-|.|=.+|.+.++.+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 446899999999988888887765
No 286
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=52.23 E-value=9.4 Score=26.81 Aligned_cols=44 Identities=20% Similarity=0.154 Sum_probs=25.4
Q ss_pred CCCCCCCCCC---CCCChHHHHHHH----HHHHHHh----CCcceEEEEEehhHH
Q 022253 81 LFFGSSVTDR---PDRTASFQAECM----AKGLRKL----GVEKCTLVGVSYGGM 124 (300)
Q Consensus 81 ~G~G~s~~~~---~~~~~~~~~~~~----~~~i~~~----~~~~~~lvG~S~Gg~ 124 (300)
-|||+..... ..++.+.++.-+ ..+-+.. ..+++.|+|.|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3788772211 446778888777 4444444 245899999999887
No 287
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=51.71 E-value=50 Score=25.85 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=42.9
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCC--------CC-------CCCCCCCCCChHHHHHHHHHHHHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLF--------FG-------SSVTDRPDRTASFQAECMAKGLRK 108 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G--------~G-------~s~~~~~~~~~~~~~~~~~~~i~~ 108 (300)
-|.|+|.-|.++ .++.|+.. |.|+..|+-- .| .-+...-..+.+.+.+.+.+.++.
T Consensus 252 vPmi~fakG~g~--------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGG--------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcch--------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 478888888553 24467776 9999999741 11 111111224667777888888998
Q ss_pred hCCcceE-EEEEe
Q 022253 109 LGVEKCT-LVGVS 120 (300)
Q Consensus 109 ~~~~~~~-lvG~S 120 (300)
.|.++.+ =+||.
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 8865543 35665
No 288
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=51.26 E-value=62 Score=22.86 Aligned_cols=47 Identities=17% Similarity=0.115 Sum_probs=25.4
Q ss_pred HHHHHHHHHHh--CCcceEEEEEehhHHHHHHHHHhCcccccceEEEcc
Q 022253 99 AECMAKGLRKL--GVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCS 145 (300)
Q Consensus 99 ~~~~~~~i~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (300)
.+.+.++++.+ ..++++++|-|..|...+.++...++.+..++=.+|
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 44555555444 346799999999999888888776666666665444
No 289
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=50.72 E-value=26 Score=27.70 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=24.5
Q ss_pred HHHHHhCCcceEEEEEehhHHHHHHHHHhCcccc
Q 022253 104 KGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLV 137 (300)
Q Consensus 104 ~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 137 (300)
+.+...+..+-++.|.|.|+.+|..++....+.+
T Consensus 89 ~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 89 KALWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3333446667789999999999999987654433
No 290
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=50.63 E-value=44 Score=24.18 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=27.3
Q ss_pred CCCceEEEEcCCCCCchhhH-HHHHHhhhcC-ceEEeec
Q 022253 43 TKKHAVVLLHPFGFDGILTW-QFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~~~~-~~~~~~l~~~-~~v~~~d 79 (300)
+.++.+|++-|+.++....- ..+.+.|.+. ++++..|
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 46788999999999887222 2344666666 9999998
No 291
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=50.49 E-value=63 Score=22.77 Aligned_cols=52 Identities=15% Similarity=-0.060 Sum_probs=31.1
Q ss_pred HHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 65 QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 65 ~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
+...+..+-.++++|-+|-- .+.+++++.+......-..+-+++||-+.|=.
T Consensus 60 il~~l~~~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 60 ILAALPKGARVIALDERGKQ--------LSSEEFAQELERWRDDGRSDVAFVIGGADGLS 111 (157)
T ss_pred HHhhCCCCCEEEEEcCCCCc--------CCHHHHHHHHHHHHhcCCccEEEEEcCccccC
Confidence 44455545568999988643 34456666666653322224566788887743
No 292
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=50.30 E-value=1e+02 Score=22.70 Aligned_cols=72 Identities=17% Similarity=0.130 Sum_probs=45.4
Q ss_pred HHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcc--cccce
Q 022253 64 FQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESM 140 (300)
Q Consensus 64 ~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~ 140 (300)
...+.+.++ +.++.+|-+|.... -....+++..+++......++++=-+..+.-.+..+..+-+ .+.++
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~~--------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~l 145 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSPR--------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGL 145 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSST--------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEE
T ss_pred HHHHHHhhcCCCEEEEecCCcchh--------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceE
Confidence 344555554 99999999876432 35567888888888876677766555555555554444322 36777
Q ss_pred EEE
Q 022253 141 VVT 143 (300)
Q Consensus 141 vl~ 143 (300)
|+.
T Consensus 146 IlT 148 (196)
T PF00448_consen 146 ILT 148 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 293
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=50.13 E-value=33 Score=27.38 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=16.3
Q ss_pred EEEEEehhHHHHHHHHHhC
Q 022253 115 TLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~~ 133 (300)
.+.|-|.||.+|..++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5789999999999998743
No 294
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=50.06 E-value=26 Score=24.58 Aligned_cols=52 Identities=10% Similarity=-0.078 Sum_probs=29.4
Q ss_pred HHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 65 QVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 65 ~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
+...+.++-.++++|-.|-- .+-+++++.+..+...-..+=+++||-+.|=.
T Consensus 60 il~~i~~~~~~i~Ld~~Gk~--------~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERGKQ--------LSSEEFAKKLERWMNQGKSDIVFIIGGADGLS 111 (155)
T ss_dssp HHCTSHTTSEEEEE-TTSEE----------HHHHHHHHHHHHHTTS-EEEEEE-BTTB--
T ss_pred HHhhccCCCEEEEEcCCCcc--------CChHHHHHHHHHHHhcCCceEEEEEecCCCCC
Confidence 34445556678899988743 34466677766665553224467889999843
No 295
>COG0218 Predicted GTPase [General function prediction only]
Probab=49.90 E-value=26 Score=25.74 Aligned_cols=59 Identities=7% Similarity=0.057 Sum_probs=32.9
Q ss_pred CCcceEEEEeeCCCcccCHHHH---HHHHHHhC--CCce--EEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 229 HFSQKIHLLWGENDKIFDMQVA---RNLKEQVG--QNAT--MESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~---~~~~~~~~--~~~~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
....|++++.-..|.+-..+.. ....+.+. .... +..++-... ..-+++.+.|.+++..
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k----~Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKK----KGIDELKAKILEWLKE 198 (200)
T ss_pred HcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccc----cCHHHHHHHHHHHhhc
Confidence 3567899999999998765543 33343332 1222 333332211 1246677777777654
No 296
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=49.85 E-value=76 Score=25.43 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCcceEEEEEehh--HHHHHHHHHhCcccccceEEEccc
Q 022253 99 AECMAKGLRKLGVEKCTLVGVSYG--GMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~~lvG~S~G--g~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
...+..++..+...+++|+|-|-= =-+=..++..+|++|.++.+=+..
T Consensus 265 ~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 265 GQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred ccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 345566777788889999998832 223345567899999998776554
No 297
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=45.96 E-value=23 Score=27.44 Aligned_cols=17 Identities=18% Similarity=0.284 Sum_probs=13.2
Q ss_pred CCcceEEEEEehhHHHH
Q 022253 110 GVEKCTLVGVSYGGMVG 126 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a 126 (300)
....++++|||+|..=.
T Consensus 233 ~i~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDY 249 (270)
T ss_pred CCCEEEEEeCCCchhhH
Confidence 34689999999997533
No 298
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=45.09 E-value=42 Score=25.64 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=17.6
Q ss_pred EEEEEehhHHHHHHHHHhCc
Q 022253 115 TLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~~p 134 (300)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999988653
No 299
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=44.55 E-value=47 Score=23.21 Aligned_cols=28 Identities=25% Similarity=0.245 Sum_probs=20.2
Q ss_pred HHHHHHhCC--cceEEEEEehhHHHHHHHH
Q 022253 103 AKGLRKLGV--EKCTLVGVSYGGMVGFKMA 130 (300)
Q Consensus 103 ~~~i~~~~~--~~~~lvG~S~Gg~~a~~~a 130 (300)
.+.+++.+. ..-.+.|.|.|+.++..++
T Consensus 17 l~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 17 LSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 333444444 4567889999999999988
No 300
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=44.51 E-value=1.7e+02 Score=23.66 Aligned_cols=89 Identities=11% Similarity=-0.086 Sum_probs=49.8
Q ss_pred CCceEEEEcCCCCCch----hhHHHHHHhhhc-C-ceEEeecCCCCCCCCCCC--------CC--------CChHHHHHH
Q 022253 44 KKHAVVLLHPFGFDGI----LTWQFQVLALAK-T-YEVYVPDFLFFGSSVTDR--------PD--------RTASFQAEC 101 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~----~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~--------~~--------~~~~~~~~~ 101 (300)
.+..|+|+-|....-. ..--.+...|.+ + .+++++=.+|.|.-.... .. .....-+..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 4668888888543211 133345566666 3 777777778887553211 00 111111111
Q ss_pred HHH-HHHHh-CCcceEEEEEehhHHHHHHHHHh
Q 022253 102 MAK-GLRKL-GVEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 102 ~~~-~i~~~-~~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
... ++.+. ..+.|+++|+|-|+..|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 111 22222 34689999999999998887754
No 301
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=43.78 E-value=35 Score=27.21 Aligned_cols=22 Identities=27% Similarity=0.327 Sum_probs=18.6
Q ss_pred CCcceEEEEEehhHHHHHHHHH
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999998887765
No 302
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=41.89 E-value=39 Score=19.99 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=14.3
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT 72 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~ 72 (300)
.|.++++||...... +.++...+++
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~ 55 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARE 55 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHH
Confidence 467888998762222 3455555444
No 303
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=41.28 E-value=63 Score=23.79 Aligned_cols=43 Identities=19% Similarity=-0.025 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCCCch--hhHHHHHHhhhcC---ceEEeecCCCCCCC
Q 022253 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSS 86 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~G~G~s 86 (300)
..+|++++||..+..- ..-..+.+.|.+. ...+.+.--|||..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 4789999999876533 1223445566654 44555554556443
No 304
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=41.09 E-value=53 Score=25.20 Aligned_cols=20 Identities=20% Similarity=0.313 Sum_probs=17.1
Q ss_pred EEEEEehhHHHHHHHHHhCc
Q 022253 115 TLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~~p 134 (300)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 48999999999999987644
No 305
>PRK06490 glutamine amidotransferase; Provisional
Probab=40.54 E-value=1.7e+02 Score=22.43 Aligned_cols=86 Identities=8% Similarity=-0.039 Sum_probs=43.5
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeec----CC-CCCC------CCCCCCCCChHHHHHHHHHHHHHhCCc
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPD----FL-FFGS------SVTDRPDRTASFQAECMAKGLRKLGVE 112 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d----~~-G~G~------s~~~~~~~~~~~~~~~~~~~i~~~~~~ 112 (300)
....+|+.|--.+... ....+++.....+.++.++ .| .... +..+...++...+...+.++++..-..
T Consensus 7 ~~~vlvi~h~~~~~~g-~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~~ 85 (239)
T PRK06490 7 KRPVLIVLHQERSTPG-RVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLKE 85 (239)
T ss_pred CceEEEEecCCCCCCh-HHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHHC
Confidence 3456677787666666 5555554443334444332 11 0000 000111122334555566666654333
Q ss_pred ceEEEEEehhHHHHHHHH
Q 022253 113 KCTLVGVSYGGMVGFKMA 130 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a 130 (300)
++=++|.|+|..+...+.
T Consensus 86 ~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 86 NKPFLGICLGAQMLARHL 103 (239)
T ss_pred CCCEEEECHhHHHHHHHc
Confidence 456899999998766553
No 306
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.27 E-value=56 Score=25.18 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=18.3
Q ss_pred ceEEEEEehhHHHHHHHHHhCc
Q 022253 113 KCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999987654
No 307
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=40.07 E-value=1.1e+02 Score=20.26 Aligned_cols=70 Identities=16% Similarity=0.089 Sum_probs=48.0
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC-cceEEEEEehhHH
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV-EKCTLVGVSYGGM 124 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~lvG~S~Gg~ 124 (300)
.||.-|| .-+. .....++.+... -.+.++++. .+.+.+++.+.+.++++..+. +.++++--=+||.
T Consensus 3 ili~sHG--~~A~-gi~~~~~~i~G~~~~i~~~~~~---------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFAS-GLLNSAEMILGEQENVEAIDFP---------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHH-HHHHHHHHhcCCCCCeEEEEeC---------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5788899 3334 566777777655 578888765 335678888899999988864 4566666555776
Q ss_pred HHHH
Q 022253 125 VGFK 128 (300)
Q Consensus 125 ~a~~ 128 (300)
....
T Consensus 71 p~n~ 74 (122)
T cd00006 71 PNNA 74 (122)
T ss_pred HHHH
Confidence 6443
No 308
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=39.77 E-value=41 Score=28.32 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=24.2
Q ss_pred ceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc
Q 022253 232 QKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL 275 (300)
Q Consensus 232 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 275 (300)
..++++.|+.|+....... +........++|+|++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccc
Confidence 3699999999998765522 222335566789999998644
No 309
>PRK04148 hypothetical protein; Provisional
Probab=39.52 E-value=67 Score=21.92 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=17.5
Q ss_pred CcceEEEEEehhHHHHHHHHHh
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
..++..+|-..|..+|..++..
T Consensus 17 ~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHHC
Confidence 3569999999888888877753
No 310
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=39.52 E-value=1.3e+02 Score=22.24 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=32.3
Q ss_pred CceEEEEcCCCCCch--hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022253 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK 108 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~ 108 (300)
+.+|+++||-.+..- ..-....+.|.+. .+|-.-.++|-|.+- ..+..+++.+++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-------CHHHHHHHHHHHhh
Confidence 568999999887654 1234455677766 666666666544332 24556667776654
No 311
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=39.15 E-value=86 Score=23.85 Aligned_cols=37 Identities=19% Similarity=0.032 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCC--chhhH-HHHHHhhhcC-ceEEeecCC
Q 022253 44 KKHAVVLLHPFGFD--GILTW-QFQVLALAKT-YEVYVPDFL 81 (300)
Q Consensus 44 ~~~~vv~lhG~~~~--~~~~~-~~~~~~l~~~-~~v~~~d~~ 81 (300)
.++.|+||+-.... .. .| ....+.|.+- +.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~-~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWD-DYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHH-HHHHHHHHHHHHCCCEEEEeccc
Confidence 46789999987733 33 33 3344556665 777777654
No 312
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=39.07 E-value=69 Score=25.11 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=40.9
Q ss_pred EEEEcCCCCCchhhHHHHHHhhhcC--------ceEEeecCCCCCCCCCCCCCCChHHHH--------HHHHHHHHHhCC
Q 022253 48 VVLLHPFGFDGILTWQFQVLALAKT--------YEVYVPDFLFFGSSVTDRPDRTASFQA--------ECMAKGLRKLGV 111 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~~~l~~~--------~~v~~~d~~G~G~s~~~~~~~~~~~~~--------~~~~~~i~~~~~ 111 (300)
-+++.|.|...--.-+.+...+.+. -+++.+|..|-=..+.......-..++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v-- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV-- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc--
Confidence 3455566654441223333433321 389999999854333322111111122 2455566554
Q ss_pred cceEEEEEeh-hHHHHHHH
Q 022253 112 EKCTLVGVSY-GGMVGFKM 129 (300)
Q Consensus 112 ~~~~lvG~S~-Gg~~a~~~ 129 (300)
++-+++|-|- ||.+.-..
T Consensus 105 ~ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 105 KPTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred CCCEEEEeCCCCCCCCHHH
Confidence 4679999995 67554433
No 313
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.96 E-value=56 Score=25.11 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=18.0
Q ss_pred ceEEEEEehhHHHHHHHHHhCc
Q 022253 113 KCTLVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 113 ~~~lvG~S~Gg~~a~~~a~~~p 134 (300)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999987653
No 314
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=38.88 E-value=1.2e+02 Score=21.45 Aligned_cols=35 Identities=26% Similarity=0.165 Sum_probs=22.9
Q ss_pred CceEEEEcCCCCCchhh-HHHHHHhhhcC-ceEEeec
Q 022253 45 KHAVVLLHPFGFDGILT-WQFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~-~~~~~~~l~~~-~~v~~~d 79 (300)
++.+|++-|..++.... =..+.+.|.+. +.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 46899999999988722 22334556555 8888887
No 315
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=38.87 E-value=90 Score=27.41 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=31.3
Q ss_pred HHHHHHHHHHh--CCcceEEEEE------ehhHHHHHHHHHhCcccccceEEEccc
Q 022253 99 AECMAKGLRKL--GVEKCTLVGV------SYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 99 ~~~~~~~i~~~--~~~~~~lvG~------S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
++++-..++.+ ..++|+++|| +.|+.+++..-+..-.+ .+.++++|.
T Consensus 323 aRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 44444444433 3579999999 68999988765544343 667777764
No 316
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=38.63 E-value=71 Score=18.19 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=23.9
Q ss_pred eEEEEcCCCCcccccChHHHHHHHHHHHhhc
Q 022253 262 TMESIEKAGHLVNLERPFVYNRQLKTILASL 292 (300)
Q Consensus 262 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 292 (300)
+.+.+-++.++...|.++++.+.+.+|-++.
T Consensus 28 TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 28 TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 4444555677778899999999999998764
No 317
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=38.25 E-value=1.6e+02 Score=21.71 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHH
Q 022253 93 RTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a 130 (300)
+..+.++.....+|..++....-++|.|+|..+...++
T Consensus 59 ~~~~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 59 YDEDPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred ccccccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 33344678888888888766556899999997655543
No 318
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=38.22 E-value=1.5e+02 Score=23.06 Aligned_cols=70 Identities=16% Similarity=0.053 Sum_probs=44.2
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
|.++|.--..--.. ....+.+.+++. -.++.+|+| -+..+++....+..+++.+.++.-+..-
T Consensus 96 Pivlm~Y~Npi~~~-Gie~F~~~~~~~GvdGlivpDLP--------------~ee~~~~~~~~~~~gi~~I~lvaPtt~~ 160 (265)
T COG0159 96 PIVLMTYYNPIFNY-GIEKFLRRAKEAGVDGLLVPDLP--------------PEESDELLKAAEKHGIDPIFLVAPTTPD 160 (265)
T ss_pred CEEEEEeccHHHHh-hHHHHHHHHHHcCCCEEEeCCCC--------------hHHHHHHHHHHHHcCCcEEEEeCCCCCH
Confidence 44444433332233 445556666665 788999988 3446688888888899988888776654
Q ss_pred HHHHHHH
Q 022253 124 MVGFKMA 130 (300)
Q Consensus 124 ~~a~~~a 130 (300)
--.-..+
T Consensus 161 ~rl~~i~ 167 (265)
T COG0159 161 ERLKKIA 167 (265)
T ss_pred HHHHHHH
Confidence 4433333
No 319
>COG3621 Patatin [General function prediction only]
Probab=37.97 E-value=92 Score=25.06 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=35.0
Q ss_pred hcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcc----eE-EEEEehhHHHHHHHHHhCc
Q 022253 70 AKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEK----CT-LVGVSYGGMVGFKMAEMYP 134 (300)
Q Consensus 70 ~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~-lvG~S~Gg~~a~~~a~~~p 134 (300)
..+|++..+|--|.- ..+...+...|++....+ +. +-|-|.||.+++.+|.-.+
T Consensus 6 msk~rIlsldGGGvr-----------G~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 6 MSKYRILSLDGGGVR-----------GAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ccceeEEEecCCccc-----------cHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 334788888743321 145566677777754333 33 4599999999999887543
No 320
>PLN02748 tRNA dimethylallyltransferase
Probab=37.87 E-value=2.1e+02 Score=24.57 Aligned_cols=74 Identities=16% Similarity=0.028 Sum_probs=46.6
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeec----CCCC--CCCCC-----------------CCCCCChHHH
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPD----FLFF--GSSVT-----------------DRPDRTASFQ 98 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d----~~G~--G~s~~-----------------~~~~~~~~~~ 98 (300)
.++.+|+|-|-.++.. ..++..|++. ..|+..| ++|. |.... +...++..++
T Consensus 20 ~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 4566888888877776 4555566666 5688777 3332 11111 1244788888
Q ss_pred HHHHHHHHHHhC--CcceEEEEEe
Q 022253 99 AECMAKGLRKLG--VEKCTLVGVS 120 (300)
Q Consensus 99 ~~~~~~~i~~~~--~~~~~lvG~S 120 (300)
.++....|+.+. .+..+|||-|
T Consensus 97 ~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCh
Confidence 999988888762 2345666644
No 321
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=37.50 E-value=63 Score=16.70 Aligned_cols=32 Identities=25% Similarity=0.162 Sum_probs=20.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEE
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLV 117 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lv 117 (300)
..|..+++-||+. .+++..+++.+..++++++
T Consensus 7 a~v~~~~fSgHad-------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHAD-------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp SEEEESGCSSS-B-------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEeecCCCC-------------HHHHHHHHHhcCCCEEEEe
Confidence 3566667666642 5678888888876666654
No 322
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=37.24 E-value=2.4e+02 Score=23.94 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCccc--ccceEEE
Q 022253 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDL--VESMVVT 143 (300)
Q Consensus 95 ~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~~vl~ 143 (300)
-+.+.+.+.++-+.+..+.+.+|--++=|.-|...|..+.+. +.++|+.
T Consensus 197 de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 197 DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 355677788888888888899999999999999999887664 6677764
No 323
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=36.70 E-value=2e+02 Score=22.23 Aligned_cols=52 Identities=23% Similarity=0.366 Sum_probs=28.8
Q ss_pred EEEeeCCCcccCHHHHHHHHHHhC-CCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 235 HLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 235 l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
++|-|..|........+++.+... .+.++.++|-++. .|++..+...+.+++
T Consensus 2 ~~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~-----~~~~~~~~~~~~~~~ 54 (250)
T TIGR02069 2 VIIGGAEDKVGDREILREFVSRAGGEDAIIVIITSASE-----EPREVGERYITIFSR 54 (250)
T ss_pred eEEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCC-----ChHHHHHHHHHHHHH
Confidence 456666666555555566655553 3457777776653 344444444444443
No 324
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=36.62 E-value=48 Score=27.63 Aligned_cols=63 Identities=11% Similarity=0.081 Sum_probs=34.9
Q ss_pred CcceEEEEeeCCCcccCHHHHHHHHHHh-CCCc--eEEEEcCCCCcc---cccChHHHHHHHHHHHhhcc
Q 022253 230 FSQKIHLLWGENDKIFDMQVARNLKEQV-GQNA--TMESIEKAGHLV---NLERPFVYNRQLKTILASLV 293 (300)
Q Consensus 230 i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~--~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~ 293 (300)
-+.|++++.|.-|.+-+ +....+.+.+ +.+. -.+.+||.|+.. .-++.+.+.+.|.+||.+..
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHST
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCC
Confidence 45699999999998754 3333333322 1233 445568887754 33556788999999998754
No 325
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=36.59 E-value=1.5e+02 Score=21.00 Aligned_cols=58 Identities=12% Similarity=0.018 Sum_probs=42.6
Q ss_pred eEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 022253 233 KIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNLERPFVYNRQLKTILAS 291 (300)
Q Consensus 233 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 291 (300)
-++++..--|.-.+.+..+.+.+.+. +.++..|--+|..+.-++...+.+.+..++.+
T Consensus 41 D~i~lG~w~d~G~~d~~~~~fl~~l~-~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 41 DLIFLGFWIDKGTPDKDMKEFLKKLK-GKKVALFGTAGAGPDSEYAKKILKNVEALLPK 98 (160)
T ss_pred CEEEEEcCccCCCCCHHHHHHHHHcc-CCeEEEEEecCCCCchHHHHHHHHHHHHhhcc
Confidence 46777777788777888888888887 78888887677666555666677777776654
No 326
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.15 E-value=62 Score=24.81 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=15.9
Q ss_pred eEEEEEehhHHHHHHHHH
Q 022253 114 CTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~ 131 (300)
-.+.|-|.|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 378999999999999984
No 327
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=34.91 E-value=1.5e+02 Score=24.68 Aligned_cols=49 Identities=12% Similarity=0.042 Sum_probs=29.0
Q ss_pred CceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEeh
Q 022253 72 TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY 121 (300)
Q Consensus 72 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~ 121 (300)
.|.||.+|.|.+++|.... ..-..++.+-+...++-+..+-++++--+.
T Consensus 290 ~fDlIilDPPsF~r~k~~~-~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~ 338 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE-FSAQRDYKDLNDLALRLLAPGGTLVTSSCS 338 (393)
T ss_pred cccEEEECCcccccCcccc-hhHHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 4999999999999987643 222333444444444555444444444333
No 328
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=33.83 E-value=1.1e+02 Score=24.08 Aligned_cols=48 Identities=25% Similarity=0.320 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhCCc---ceEEEEEehhHHHHHHHHHhCcccccceEEEc
Q 022253 96 SFQAECMAKGLRKLGVE---KCTLVGVSYGGMVGFKMAEMYPDLVESMVVTC 144 (300)
Q Consensus 96 ~~~~~~~~~~i~~~~~~---~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~ 144 (300)
+....-+..+++.++.+ .+.=+|.+||+.. ..+|.++..+|-|+.+..
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCH
Confidence 34456667777888655 4555899999975 446666656666666543
No 329
>PLN03019 carbonic anhydrase
Probab=33.75 E-value=78 Score=25.43 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCcceEEEEEehhHHH
Q 022253 98 QAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~~~~lvG~S~Gg~~ 125 (300)
....|.-.+..++.+.|+|+|||-=|.+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaV 228 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGI 228 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHH
Confidence 4567788889999999999999964443
No 330
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=33.74 E-value=54 Score=26.08 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=15.1
Q ss_pred EEEEEehhHHHHHHHHH
Q 022253 115 TLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~ 131 (300)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999999875
No 331
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=33.47 E-value=88 Score=24.35 Aligned_cols=67 Identities=9% Similarity=0.048 Sum_probs=41.6
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC-CcceEEEEEe
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG-VEKCTLVGVS 120 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~lvG~S 120 (300)
..|+||++.|+.+++. ..-..+...|..+ ++|.++.-|. ..+..-..+-.+-..+. ...+.|+=-|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt-----------~eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS-----------AEELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC-----------HHHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 4589999999987766 3445666777777 9999986551 11111122344555553 3467777666
Q ss_pred h
Q 022253 121 Y 121 (300)
Q Consensus 121 ~ 121 (300)
|
T Consensus 123 W 123 (264)
T TIGR03709 123 H 123 (264)
T ss_pred c
Confidence 5
No 332
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=33.35 E-value=2.5e+02 Score=22.34 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=50.1
Q ss_pred CcccceeecCCCeEEEEEccCCCCCCceEEEE-------cCCCCCchhhHHHHH-------HhhhcC--ceEEeecCCCC
Q 022253 20 GMTQRTIEIEPGTILNIWVPKKTTKKHAVVLL-------HPFGFDGILTWQFQV-------LALAKT--YEVYVPDFLFF 83 (300)
Q Consensus 20 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~l-------hG~~~~~~~~~~~~~-------~~l~~~--~~v~~~d~~G~ 83 (300)
|.+.+.+.. .|.+-.|....+ ...|++|-+ +|++......|..++ +...+. ...+++.+-+.
T Consensus 98 GsR~k~V~l-GGera~y~FeeP-qPnppvVtfDVFD~p~pglpkpire~~~dVmedP~eWArk~Vk~fgadmvTiHlIsT 175 (403)
T COG2069 98 GSRGKVVML-GGERAFYRFEEP-QPNPPVVTFDVFDIPRPGLPKPIREHYDDVMEDPGEWARKCVKKFGADMVTIHLIST 175 (403)
T ss_pred CCcceEEEe-cCcccccccCCC-CCCCCeeEEEeccCCCCCCchhHHHHHHHHhhCHHHHHHHHHHHhCCceEEEEeecC
Confidence 344456666 466644433333 344555443 355443333443332 222222 45566655432
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEeh
Q 022253 84 GSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY 121 (300)
Q Consensus 84 G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~ 121 (300)
+..-.+.+.++.++.+.++++..+. .+++|-|-
T Consensus 176 ---dPki~D~p~~EAak~lEdvLqAVdv--PiiiGGSG 208 (403)
T COG2069 176 ---DPKIKDTPAKEAAKTLEDVLQAVDV--PIIIGGSG 208 (403)
T ss_pred ---CccccCCCHHHHHHHHHHHHHhcCc--CEEecCCC
Confidence 2223557788889999999999863 35667663
No 333
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.19 E-value=2.4e+02 Score=22.69 Aligned_cols=86 Identities=19% Similarity=0.094 Sum_probs=48.0
Q ss_pred HHHHhhhcC-ceEEeecCCCCCCCCCCCC---CCChHHH--HHHHHHHHHHhCCcce------EEEEEeh----------
Q 022253 64 FQVLALAKT-YEVYVPDFLFFGSSVTDRP---DRTASFQ--AECMAKGLRKLGVEKC------TLVGVSY---------- 121 (300)
Q Consensus 64 ~~~~~l~~~-~~v~~~d~~G~G~s~~~~~---~~~~~~~--~~~~~~~i~~~~~~~~------~lvG~S~---------- 121 (300)
..+..|.+. |.|+.+|-.-.|....... ..-..+. .+-+.+++++..++-| ..||-|.
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhc
Confidence 344455555 9999999886665443221 1111111 2345666666665533 3567773
Q ss_pred -hHHHHHHHHHhCcccccceEEEcccCCCC
Q 022253 122 -GGMVGFKMAEMYPDLVESMVVTCSVMGLT 150 (300)
Q Consensus 122 -Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 150 (300)
+|.+.+.-+.+.- .|+.+|+.++...+.
T Consensus 95 v~gTl~Ll~am~~~-gv~~~vFSStAavYG 123 (329)
T COG1087 95 VVGTLNLIEAMLQT-GVKKFIFSSTAAVYG 123 (329)
T ss_pred hHhHHHHHHHHHHh-CCCEEEEecchhhcC
Confidence 3444444443332 399999988876543
No 334
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.06 E-value=2.2e+02 Score=24.59 Aligned_cols=85 Identities=14% Similarity=0.156 Sum_probs=51.2
Q ss_pred EEcCCCCCchhhHHHH-HHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHH
Q 022253 50 LLHPFGFDGILTWQFQ-VLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (300)
Q Consensus 50 ~lhG~~~~~~~~~~~~-~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~ 127 (300)
|=-|++.+.. .-... +++-..+ |.|+.+|-.|.-.. -..+-..+..+++.-..+.++.||.-+=|.-++
T Consensus 443 fekGYgkd~a-~vak~AI~~a~~~gfDVvLiDTAGR~~~--------~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv 513 (587)
T KOG0781|consen 443 FEKGYGKDAA-GVAKEAIQEARNQGFDVVLIDTAGRMHN--------NAPLMTSLAKLIKVNKPDLILFVGEALVGNDSV 513 (587)
T ss_pred HhhhcCCChH-HHHHHHHHHHHhcCCCEEEEeccccccC--------ChhHHHHHHHHHhcCCCceEEEehhhhhCcHHH
Confidence 3345555444 33222 2333334 99999998764322 234566777788877888899999888777666
Q ss_pred HHHHhC---------cccccceEEE
Q 022253 128 KMAEMY---------PDLVESMVVT 143 (300)
Q Consensus 128 ~~a~~~---------p~~v~~~vl~ 143 (300)
.-+..+ |..++++++.
T Consensus 514 ~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 514 DQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHhcCCCccccceEEEE
Confidence 544332 3346666654
No 335
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=32.95 E-value=2.4e+02 Score=23.68 Aligned_cols=99 Identities=16% Similarity=0.003 Sum_probs=54.4
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCC---C---CCChHHHHHHHHHHHHHhCCcceEEEE
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDR---P---DRTASFQAECMAKGLRKLGVEKCTLVG 118 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~---~---~~~~~~~~~~~~~~i~~~~~~~~~lvG 118 (300)
.+++++--..+... .-....+.+.+. +-|+-.|..++=.--... . ...++.+.+++......-.....+|.|
T Consensus 49 ~~villSd~~G~~d-~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g 127 (456)
T COG3946 49 GLVILLSDEAGIGD-QERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTG 127 (456)
T ss_pred eeeEEEEcccChhh-hhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEee
Confidence 34555544333333 333445555555 888888877652211111 1 134444444444433333345667889
Q ss_pred EehhHHHHHHHHHhCccc-ccceEEEcc
Q 022253 119 VSYGGMVGFKMAEMYPDL-VESMVVTCS 145 (300)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~-v~~~vl~~~ 145 (300)
---||.+++..+++-|+. +.+.+-.++
T Consensus 128 ~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 128 PGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred cCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 999999999998887752 444444433
No 336
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=32.89 E-value=82 Score=28.16 Aligned_cols=45 Identities=24% Similarity=0.053 Sum_probs=28.0
Q ss_pred CCCceEEEEcCCCCCch--hhHHHHHHhhhcC---ceEEeecCCCCCCCC
Q 022253 43 TKKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSV 87 (300)
Q Consensus 43 ~~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~G~G~s~ 87 (300)
.-+.|+++|||.....- ..-..+.+.|... +..+.+---||+.+.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 35779999999886543 1334456667654 455555445566655
No 337
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=32.63 E-value=2e+02 Score=22.58 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=35.9
Q ss_pred CCCcceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcC-CCCcc-cccChHHHHHHHHHHHhh
Q 022253 228 PHFSQKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEK-AGHLV-NLERPFVYNRQLKTILAS 291 (300)
Q Consensus 228 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~-~~~~~~~~~~~i~~fl~~ 291 (300)
....+|++++.|++ ...++..+.+| +.+.+.++. .|++. ..-.|++..+.|.+=.++
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P-~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~ 202 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETP-WAVFVPTKESLSRYSAKSPSMKKVKEELREAVKE 202 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCC-CceEEEEeeecCCCccccCCHHHHHHHHHHHHHH
Confidence 34688999999953 33455566666 888777764 35433 334666666666555443
No 338
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=32.19 E-value=3.1e+02 Score=23.07 Aligned_cols=73 Identities=11% Similarity=-0.001 Sum_probs=39.9
Q ss_pred CceEEEEcCCCCCch--hhHHHHHHhhhcC-ceEEeecCCCC---CCCCCCCCCCChHHHHHHHHHHHHH--hCCcceEE
Q 022253 45 KHAVVLLHPFGFDGI--LTWQFQVLALAKT-YEVYVPDFLFF---GSSVTDRPDRTASFQAECMAKGLRK--LGVEKCTL 116 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~--~~~~~~~~~l~~~-~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~l 116 (300)
+.++|+++....... +.....+..|.+. +.|+-++ +|+ |... ...-.++++.+..+...+.. +..+++.+
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g-~gr~~~~~~I~~~~~~~~~~~~l~gk~vlI 193 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG-PGRMAEPEEIVAAAERALSPKDLAGKRVLI 193 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC-CCCCCCHHHHHHHHHHHhhhcccCCCEEEE
Confidence 456777775543221 1345556777776 7776554 343 2222 11235677777777766643 34456666
Q ss_pred EEE
Q 022253 117 VGV 119 (300)
Q Consensus 117 vG~ 119 (300)
.|-
T Consensus 194 TgG 196 (399)
T PRK05579 194 TAG 196 (399)
T ss_pred eCC
Confidence 666
No 339
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=31.96 E-value=2.7e+02 Score=22.31 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=43.9
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeec----CCCC--CCCCC-----------------CCCCCChHHHHHHH
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPD----FLFF--GSSVT-----------------DRPDRTASFQAECM 102 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d----~~G~--G~s~~-----------------~~~~~~~~~~~~~~ 102 (300)
.||+|-|-.+++. ..++-.|++. ..++..| ++|. |.... +...++...+.++.
T Consensus 5 ~ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 4778888777766 3444456655 6788888 3332 21111 12447888888999
Q ss_pred HHHHHHh--CCcceEEEEEe
Q 022253 103 AKGLRKL--GVEKCTLVGVS 120 (300)
Q Consensus 103 ~~~i~~~--~~~~~~lvG~S 120 (300)
...++.+ ..+..+|+|-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 9888876 22345666644
No 340
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=31.53 E-value=98 Score=23.51 Aligned_cols=68 Identities=12% Similarity=-0.037 Sum_probs=43.5
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHH-HHHHHHHHHhC-CcceEEEEE
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQA-ECMAKGLRKLG-VEKCTLVGV 119 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~lvG~ 119 (300)
+.|+||++.|+.+++. ..-..+...|..+ ++|.++.-|- .++.. ..+-.+-+.+. ...+.|+=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 4689999999987766 3445666777777 8999887651 12222 23444555553 346777777
Q ss_pred ehhH
Q 022253 120 SYGG 123 (300)
Q Consensus 120 S~Gg 123 (300)
|+=+
T Consensus 97 SwY~ 100 (230)
T TIGR03707 97 SWYN 100 (230)
T ss_pred chhh
Confidence 7633
No 341
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.10 E-value=70 Score=21.20 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHH
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a 126 (300)
.....+.-.+..++.+.++++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 456677778889999999999997655443
No 342
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.09 E-value=49 Score=25.02 Aligned_cols=38 Identities=13% Similarity=0.013 Sum_probs=25.3
Q ss_pred CCceEEEEcCCCCCch-hhHHHHHHhhhcC-ceEEeecCC
Q 022253 44 KKHAVVLLHPFGFDGI-LTWQFQVLALAKT-YEVYVPDFL 81 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~ 81 (300)
+.|+||++.|+.+++. ..-..+...|..+ ++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 3579999999998877 2334445556556 999998766
No 343
>PF15566 Imm18: Immunity protein 18
Probab=31.04 E-value=64 Score=17.70 Aligned_cols=30 Identities=13% Similarity=0.168 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEEEehhHH
Q 022253 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 95 ~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
.+.+.++|..+......+.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 445667777777776667899999999986
No 344
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=30.90 E-value=58 Score=21.19 Aligned_cols=30 Identities=20% Similarity=0.120 Sum_probs=22.6
Q ss_pred EEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecC
Q 022253 48 VVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDF 80 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~ 80 (300)
+|+|.|.++++. ..+++.|++. +.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 688999999888 4556667665 77777776
No 345
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=30.74 E-value=2.7e+02 Score=22.32 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=36.9
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCC------CCCCCC-----------------CCCCCChHHHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLF------FGSSVT-----------------DRPDRTASFQA 99 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G------~G~s~~-----------------~~~~~~~~~~~ 99 (300)
.+.++++-|-.+++. ..++..|++. ..++..|-.- +|.... +...++..++.
T Consensus 3 ~~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~ 79 (307)
T PRK00091 3 KPKVIVIVGPTASGK---TALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQ 79 (307)
T ss_pred CceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHH
Confidence 456888888887776 4555666665 4666666421 111111 11236677778
Q ss_pred HHHHHHHHHh
Q 022253 100 ECMAKGLRKL 109 (300)
Q Consensus 100 ~~~~~~i~~~ 109 (300)
++....++.+
T Consensus 80 ~~a~~~i~~i 89 (307)
T PRK00091 80 RDALAAIADI 89 (307)
T ss_pred HHHHHHHHHH
Confidence 8888878765
No 346
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=30.34 E-value=3.4e+02 Score=23.08 Aligned_cols=69 Identities=16% Similarity=0.085 Sum_probs=43.4
Q ss_pred HhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcc--cccceEEE
Q 022253 67 LALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVT 143 (300)
Q Consensus 67 ~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~ 143 (300)
+.+.+. |.++.+|-+|.-. .-+.+.+.+..+.+......+++|--++-|.-+...|..+.+ .+.++|+.
T Consensus 176 ~~~~~~~~DvViIDTaGr~~--------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 176 EKFKKENFDIIIVDTSGRHK--------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHHHhCCCCEEEEECCCCCc--------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 344443 9999999997432 223456667776666666677777777766666666655533 35666653
No 347
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=30.26 E-value=93 Score=19.54 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=19.0
Q ss_pred cccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCC
Q 022253 21 MTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFD 57 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~ 57 (300)
+-+-.+.++++.++.|... ++..+|++||+-=.
T Consensus 47 ~~ElR~r~g~~yRiif~~~----~~~~vvll~gf~Kk 79 (95)
T TIGR02683 47 VSELRIDFGPGYRVYFTQR----GKVIILLLCGGDKS 79 (95)
T ss_pred cEEEEecCCCCEEEEEEEE----CCEEEEEEeCEecc
Confidence 3334445533566655443 35578899987543
No 348
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=30.09 E-value=87 Score=24.95 Aligned_cols=33 Identities=3% Similarity=-0.091 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
-+.+..+++.+.....-++|-|||+.+++.+..
T Consensus 121 W~El~~i~~w~~~~~~s~LgICwGaQa~a~alg 153 (302)
T PRK05368 121 WDELKEILDWAKTHVTSTLFICWAAQAALYHLY 153 (302)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcHHHHHHHHHcC
Confidence 334555555554335668899999999887664
No 349
>PRK05665 amidotransferase; Provisional
Probab=30.04 E-value=1.3e+02 Score=23.09 Aligned_cols=36 Identities=19% Similarity=0.119 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHH
Q 022253 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMA 130 (300)
Q Consensus 95 ~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a 130 (300)
...+...+.++++..-..++-++|.|+|..+...++
T Consensus 73 ~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 73 TDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 345667777777765333455899999997665544
No 350
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=29.76 E-value=1.9e+02 Score=20.99 Aligned_cols=55 Identities=15% Similarity=0.076 Sum_probs=37.0
Q ss_pred ccceeecCCCeEEEEEccCCCCCCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCCC
Q 022253 22 TQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLFF 83 (300)
Q Consensus 22 ~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~ 83 (300)
....+...||..+...... .|+|...++.... ...+.+..+.++ +.|+++...+.
T Consensus 54 ~~~~f~l~dG~~v~lsd~~------lV~FwaswCp~C~-~e~P~L~~l~~~~g~~Vi~Vs~D~~ 110 (181)
T PRK13728 54 APRWFRLSNGRQVNLADWK------VVLFMQGHCPYCH-QFDPVLKQLAQQYGFSVFPYTLDGQ 110 (181)
T ss_pred CCCccCCCCCCEeehhHce------EEEEECCCCHhHH-HHHHHHHHHHHHcCCEEEEEEeCCC
Confidence 4555666677665543221 7788888887777 777777777665 88888876544
No 351
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=29.66 E-value=2.5e+02 Score=21.95 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=33.9
Q ss_pred EcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCc
Q 022253 51 LHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVE 112 (300)
Q Consensus 51 lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~ 112 (300)
+=|.+|++...-..++..+.. +.++-++.. ..++..++-+|++.++...|.+
T Consensus 36 LvG~~GsGr~sl~rLaa~i~~-~~~~~i~~~---------~~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 36 LVGVGGSGRQSLARLAAFICG-YEVFQIEIT---------KGYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp EECTTTSCHHHHHHHHHHHTT-EEEE-TTTS---------TTTHHHHHHHHHHHHHHHHHCS
T ss_pred EecCCCccHHHHHHHHHHHhc-cceEEEEee---------CCcCHHHHHHHHHHHHHHHhcc
Confidence 336666655355555555543 788777642 3477889999999998877544
No 352
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=29.63 E-value=1.2e+02 Score=21.26 Aligned_cols=52 Identities=21% Similarity=0.062 Sum_probs=29.8
Q ss_pred HHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHH
Q 022253 64 FQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMV 125 (300)
Q Consensus 64 ~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~ 125 (300)
.+...+.+ -.|+++|-+|-- .+..++++.+....+. +.+-++++|-+.|=.-
T Consensus 58 ~il~~~~~-~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~ 109 (153)
T TIGR00246 58 RILAAIGK-AHVVTLDIPGKP--------WTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSP 109 (153)
T ss_pred HHHHhCCC-CeEEEEcCCCCc--------CCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCH
Confidence 34445543 468888887643 3445666666665322 3234567788777543
No 353
>PRK07877 hypothetical protein; Provisional
Probab=28.95 E-value=1e+02 Score=28.08 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=28.3
Q ss_pred HHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEccc
Q 022253 107 RKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 107 ~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
+.+...+|.|+|-+.|+.++..+|..- -+..+++++.-
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D 140 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFD 140 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCC
Confidence 445567899999999999998887643 13678888764
No 354
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.91 E-value=60 Score=23.13 Aligned_cols=22 Identities=18% Similarity=0.049 Sum_probs=17.2
Q ss_pred CcceEEEEEehhHHHHHHHHHh
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
...-.+.|-|.||.+|+.++..
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC
T ss_pred CCccEEEEcChhhhhHHHHHhC
Confidence 3445789999999999888765
No 355
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=28.46 E-value=60 Score=34.49 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=23.9
Q ss_pred HHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 102 MAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 102 ~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+..+++.+|+++-.++|||+|=+.|+.+|.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 345567778999999999999988887653
No 356
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=28.41 E-value=73 Score=17.18 Aligned_cols=27 Identities=4% Similarity=0.074 Sum_probs=22.0
Q ss_pred CChHHHHHHHHHHHHHhCCcceEEEEE
Q 022253 93 RTASFQAECMAKGLRKLGVEKCTLVGV 119 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~~~~lvG~ 119 (300)
...+.+-.|+...|..+.+..+.++|-
T Consensus 6 w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 456778899999999988888888763
No 357
>PLN02840 tRNA dimethylallyltransferase
Probab=28.36 E-value=3.3e+02 Score=23.10 Aligned_cols=74 Identities=19% Similarity=0.091 Sum_probs=43.6
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeecC----CCC--CCCCC-----------------CCCCCChHHH
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPDF----LFF--GSSVT-----------------DRPDRTASFQ 98 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~----~G~--G~s~~-----------------~~~~~~~~~~ 98 (300)
.+..+|+|-|-.+++. ..++..|++. ..++..|- +|. |.... +...++..++
T Consensus 19 ~~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 19 KKEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred cCCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 3456788888777766 4455556655 35777774 222 11111 1234778888
Q ss_pred HHHHHHHHHHhC--CcceEEEEEe
Q 022253 99 AECMAKGLRKLG--VEKCTLVGVS 120 (300)
Q Consensus 99 ~~~~~~~i~~~~--~~~~~lvG~S 120 (300)
.++....++.+. .+..+|||-+
T Consensus 96 ~~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 96 FDDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCc
Confidence 889888888762 2334566543
No 358
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=28.35 E-value=69 Score=24.98 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=22.9
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeec
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d 79 (300)
.||++|....+.. ....+++.|.++ |.++.++
T Consensus 232 ~IILmHd~~~T~~-aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTE-GLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHH-HHHHHHHHHHHCCCEEEeHH
Confidence 5778887665555 677777888777 8877664
No 359
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=28.34 E-value=64 Score=26.20 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=15.1
Q ss_pred eEEEEEehhHHHHHHHHHh
Q 022253 114 CTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~ 132 (300)
-.++|||+|=+.|+.++..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 3579999999888877643
No 360
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.79 E-value=56 Score=26.60 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=15.6
Q ss_pred EEEEEehhHHHHHHHHHh
Q 022253 115 TLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~ 132 (300)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 578999999999999863
No 361
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=27.64 E-value=80 Score=30.68 Aligned_cols=24 Identities=29% Similarity=0.443 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCcceEEEEEehhHH
Q 022253 101 CMAKGLRKLGVEKCTLVGVSYGGM 124 (300)
Q Consensus 101 ~~~~~i~~~~~~~~~lvG~S~Gg~ 124 (300)
.+.+++..++++|-.++|||.|-.
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccchh
Confidence 455677778999999999998743
No 362
>PLN03014 carbonic anhydrase
Probab=27.55 E-value=1.2e+02 Score=24.67 Aligned_cols=30 Identities=27% Similarity=0.471 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCcceEEEEEeh-hHHHHH
Q 022253 98 QAECMAKGLRKLGVEKCTLVGVSY-GGMVGF 127 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~~~~lvG~S~-Gg~~a~ 127 (300)
....|.-.+..++.+.++|+|||- ||.-|+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGL 236 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHH
Confidence 456777788899999999999996 544443
No 363
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.45 E-value=1e+02 Score=21.18 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhH
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGG 123 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg 123 (300)
+....+.-.+..++.+.++++||+-=|
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCc
Confidence 455667777888999999999998533
No 364
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=27.22 E-value=88 Score=20.54 Aligned_cols=31 Identities=26% Similarity=0.055 Sum_probs=20.6
Q ss_pred EEEcCCCCCchhhHHHHHHhhhcC--ceEEeecCCC
Q 022253 49 VLLHPFGFDGILTWQFQVLALAKT--YEVYVPDFLF 82 (300)
Q Consensus 49 v~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G 82 (300)
|++||-.|++. ..+++.+++. +.++.+|..-
T Consensus 1 ill~G~~G~GK---T~l~~~la~~l~~~~~~i~~~~ 33 (132)
T PF00004_consen 1 ILLHGPPGTGK---TTLARALAQYLGFPFIEIDGSE 33 (132)
T ss_dssp EEEESSTTSSH---HHHHHHHHHHTTSEEEEEETTH
T ss_pred CEEECcCCCCe---eHHHHHHHhhcccccccccccc
Confidence 68999988887 3344455544 6677777653
No 365
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=27.10 E-value=3.5e+02 Score=22.12 Aligned_cols=52 Identities=8% Similarity=-0.093 Sum_probs=27.4
Q ss_pred CeEEEEEccCCC----CCCceEEEEcCCCCCch-hhHHHHHHhhhcCceEEeecCCC
Q 022253 31 GTILNIWVPKKT----TKKHAVVLLHPFGFDGI-LTWQFQVLALAKTYEVYVPDFLF 82 (300)
Q Consensus 31 g~~l~~~~~~~~----~~~~~vv~lhG~~~~~~-~~~~~~~~~l~~~~~v~~~d~~G 82 (300)
+-..||...+++ ..+++=+|+||.|.... ..-.+.+..-.....|+..|.-+
T Consensus 193 Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 193 NPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred CcccccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEEEeCCCc
Confidence 344566554431 24566677777664332 13333333333338888888654
No 366
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=27.08 E-value=2.9e+02 Score=21.25 Aligned_cols=59 Identities=10% Similarity=0.048 Sum_probs=38.2
Q ss_pred ceEEEEeeCCCcccCHHHHHHHHHHhCCCceEEEEcCCCCcccc-----cChHHHHHHHHHHHhhcc
Q 022253 232 QKIHLLWGENDKIFDMQVARNLKEQVGQNATMESIEKAGHLVNL-----ERPFVYNRQLKTILASLV 293 (300)
Q Consensus 232 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~~ 293 (300)
.|++++||--+.. .....+.+.+....+++.++--||...- ...+.+++.+.++++...
T Consensus 26 ~plvllHG~~~~~---~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~ 89 (276)
T TIGR02240 26 TPLLIFNGIGANL---ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD 89 (276)
T ss_pred CcEEEEeCCCcch---HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Confidence 5899999965433 3334555556546777777766776432 134677888888887764
No 367
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=27.02 E-value=1.4e+02 Score=22.75 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=30.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHH---HHHHhCCcceE--EEEEehhH-HHHHHHHH
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAK---GLRKLGVEKCT--LVGVSYGG-MVGFKMAE 131 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~--lvG~S~Gg-~~a~~~a~ 131 (300)
--|..+|-+|...+.... -..+......+.. ..+.-| .|++ ++|++++| +++.-+.+
T Consensus 66 pIv~lVD~~sQa~grreE-llGi~~alAhla~a~a~AR~~G-HpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRREE-LLGINQALAHLAKAYALARLAG-HPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CEEEEEeCCccccchHHH-HhhHHHHHHHHHHHHHHHHHcC-CCeEEEEecccccHHHHHHHHHh
Confidence 668889999887765422 1222222222222 222234 4543 67999855 55665554
No 368
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=26.92 E-value=1.8e+02 Score=18.86 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhC
Q 022253 99 AECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 133 (300)
.+++.++++.-..++++|+=||.-+.+...+-.++
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 46777888887778999999999999888766544
No 369
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=26.67 E-value=2.9e+02 Score=22.24 Aligned_cols=62 Identities=15% Similarity=-0.020 Sum_probs=35.2
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~ 111 (300)
..++|.+.|.-.++- -+..|+++ |.|..+=++..-.-+.....-..+...+|...+++++++
T Consensus 6 ~~VvvamSgGVDSsV-----aa~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSSV-----AARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred ceEEEEecCCchHHH-----HHHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHhCC
Confidence 456777777655443 23456666 888888777662222222234445555666666666643
No 370
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=26.44 E-value=35 Score=24.55 Aligned_cols=36 Identities=8% Similarity=-0.144 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHh
Q 022253 97 FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 97 ~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~ 132 (300)
++-+.+..+++.....-.-.+|-|||+..|+.++.-
T Consensus 82 ~Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 82 DYWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred chHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcC
Confidence 344556666666653345678999999999988753
No 371
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=26.33 E-value=72 Score=26.55 Aligned_cols=37 Identities=24% Similarity=0.378 Sum_probs=30.2
Q ss_pred CcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCC
Q 022253 111 VEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMG 148 (300)
Q Consensus 111 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 148 (300)
..+++++|.+.||.-.=..+.++|+.+..+.+ ++...
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i-~~~~~ 154 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV-EPAVG 154 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc-CCCCC
Confidence 35889999999999999999999998888765 44433
No 372
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.29 E-value=61 Score=25.52 Aligned_cols=19 Identities=26% Similarity=0.499 Sum_probs=16.4
Q ss_pred EEEEEehhHHHHHHHHHhC
Q 022253 115 TLVGVSYGGMVGFKMAEMY 133 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~~ 133 (300)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6789999999999998654
No 373
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=26.29 E-value=82 Score=24.47 Aligned_cols=42 Identities=19% Similarity=0.116 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCcce-EEEEEehhHHHHHHHHHhCcccccceE
Q 022253 99 AECMAKGLRKLGVEKC-TLVGVSYGGMVGFKMAEMYPDLVESMV 141 (300)
Q Consensus 99 ~~~~~~~i~~~~~~~~-~lvG~S~Gg~~a~~~a~~~p~~v~~~v 141 (300)
+.-+.++++.-. .++ .++|.|+|+.-+..+..+.+.+-++++
T Consensus 27 AGVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 27 AGVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 334445553333 343 478999999999999888877655544
No 374
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=26.18 E-value=3.1e+02 Score=22.15 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=37.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEeh-hHHHHHHHHHhC
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY-GGMVGFKMAEMY 133 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~-Gg~~a~~~a~~~ 133 (300)
=.|+..|.+. ..++.+.+++.+.++++..+...++|+|+|. |--++-++|.+.
T Consensus 50 d~V~~~~~~~--------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 50 NHVWKLSGKP--------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred CEEEEecCcc--------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 3677776541 2266788899999998886543588888885 667777777654
No 375
>PRK14974 cell division protein FtsY; Provisional
Probab=26.16 E-value=3.6e+02 Score=22.00 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=39.2
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcc--cccceEEE
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPD--LVESMVVT 143 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~vl~ 143 (300)
+.++.+|-.|.... -..+.+.+..+.+....+.+++|.-+.-|.-+..-+..+.+ .+.++|+.
T Consensus 223 ~DvVLIDTaGr~~~--------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 223 IDVVLIDTAGRMHT--------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCEEEEECCCccCC--------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 78888888765432 23456666677666666666777766666666655554432 35666653
No 376
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.86 E-value=57 Score=23.67 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=19.5
Q ss_pred eEEEEcCC---CCCchhhHHHHHHhhhcC-ceEEeec
Q 022253 47 AVVLLHPF---GFDGILTWQFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 47 ~vv~lhG~---~~~~~~~~~~~~~~l~~~-~~v~~~d 79 (300)
.||++|.. ..+.. ....+++.|.++ |+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~-~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVK-ALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHH-HHHHHHHHHHHCCCEEEEHH
Confidence 48888842 22233 556667777666 8777664
No 377
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=25.69 E-value=2e+02 Score=20.40 Aligned_cols=53 Identities=17% Similarity=0.092 Sum_probs=37.0
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEe-hhHHHHHHHHHhC
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS-YGGMVGFKMAEMY 133 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S-~Gg~~a~~~a~~~ 133 (300)
=+|+.++.+. ...++.+.+++.+.++++..+ ..++|+|+| .|.-++-++|.+.
T Consensus 53 d~v~~~~~~~-------~~~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 53 DKVLVAEDPA-------LAHYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred CEEEEecChh-------hcccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 4666665432 123567888999999998876 467777766 5777888888765
No 378
>PLN00416 carbonate dehydratase
Probab=25.23 E-value=1.8e+02 Score=22.65 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhCCcceEEEEEehhHHHH
Q 022253 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVG 126 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a 126 (300)
....|.-.+..++.+.|+++|||-=|.+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~ 154 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIK 154 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHH
Confidence 45667778888999999999999644443
No 379
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=25.22 E-value=1e+02 Score=24.92 Aligned_cols=31 Identities=26% Similarity=0.180 Sum_probs=21.0
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcCceEEeecC
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDF 80 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~ 80 (300)
-+|++||-+|++. ..+...|+++..+-+-|.
T Consensus 178 RliLlhGPPGTGK---TSLCKaLaQkLSIR~~~~ 208 (423)
T KOG0744|consen 178 RLILLHGPPGTGK---TSLCKALAQKLSIRTNDR 208 (423)
T ss_pred eEEEEeCCCCCCh---hHHHHHHHHhheeeecCc
Confidence 4899999999887 456666666544444443
No 380
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=24.98 E-value=93 Score=20.53 Aligned_cols=32 Identities=25% Similarity=0.432 Sum_probs=23.3
Q ss_pred ceEEEE-EehhHHHHHHHHHhCcccccceEEEcc
Q 022253 113 KCTLVG-VSYGGMVGFKMAEMYPDLVESMVVTCS 145 (300)
Q Consensus 113 ~~~lvG-~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (300)
++.|+| ..+.|...+.+...+|+ ++-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 577888 88888888888888886 554444443
No 381
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=24.62 E-value=1e+02 Score=25.35 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=26.4
Q ss_pred cccceeecCCCeEEEEEccCCC----------CCCceEEEEcCCCCC
Q 022253 21 MTQRTIEIEPGTILNIWVPKKT----------TKKHAVVLLHPFGFD 57 (300)
Q Consensus 21 ~~~~~i~~~~g~~l~~~~~~~~----------~~~~~vv~lhG~~~~ 57 (300)
++.-....+||.++-|..+|++ ..+|.|+++|-+.+.
T Consensus 451 FEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 451 FEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred HHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 3444555669999999888753 357888888987654
No 382
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=24.36 E-value=2.9e+02 Score=22.74 Aligned_cols=61 Identities=15% Similarity=0.056 Sum_probs=35.9
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCC
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGV 111 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~ 111 (300)
...++|.+.|.-+|+- .+..|.++ |.|+.+-+.-+..+ ....-..+...+|...+.+.+|+
T Consensus 3 ~~kV~v~mSGGVDSSV-----aA~lLk~QGyeViGl~m~~~~~~--~~~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 3 KKKVLVGMSGGVDSSV-----AAYLLKEQGYEVIGLFMKNWDED--GGGGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred CcEEEEEccCCHHHHH-----HHHHHHHcCCeEEEEEEEeeccC--CCCcCCchhHHHHHHHHHHHhCC
Confidence 3456777777665544 23346666 99999988766541 11122334445666666666654
No 383
>PLN02777 photosystem I P subunit (PSI-P)
Probab=24.35 E-value=37 Score=23.84 Aligned_cols=61 Identities=8% Similarity=0.150 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEc
Q 022253 83 FGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTC 144 (300)
Q Consensus 83 ~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~ 144 (300)
.|++.........++..+++.+.-+... +|..++|.-.||.+++.....-=+-|+.+=++.
T Consensus 64 ~ge~s~~~~~~~~~ei~k~~~e~Wd~~E-dK~av~~l~~aaiVal~v~~~VL~AId~lPLlP 124 (167)
T PLN02777 64 TGEAPAEVETTELPEIVKTVQEAWDKVE-DKYAVSSLAFAGVVALWGSAGMISAIDRLPLVP 124 (167)
T ss_pred ccCCCcccccccHHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3665544445566788888888888876 677888999999999987654333344444443
No 384
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=24.33 E-value=1e+02 Score=28.20 Aligned_cols=22 Identities=32% Similarity=0.409 Sum_probs=18.0
Q ss_pred CCcceEEEEEehhHHHHHHHHH
Q 022253 110 GVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 110 ~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
+..--++.|.|.||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4455678899999999988886
No 385
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=24.10 E-value=2.6e+02 Score=22.31 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=17.3
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcCceEEeec
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPD 79 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d 79 (300)
.-||+.||..-+.. .|...+..=.+.|+|+..+
T Consensus 163 nEviLT~g~SrTV~-~FL~~A~kk~Rkf~viVaE 195 (353)
T KOG1465|consen 163 NEVILTLGSSRTVE-NFLKHAAKKGRKFRVIVAE 195 (353)
T ss_pred CceEEecCccHHHH-HHHHHHHhccCceEEEEee
Confidence 35899999333322 3332222222239988766
No 386
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.08 E-value=1.1e+02 Score=23.11 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=21.1
Q ss_pred ceEEEEcCC-CCCchhhHHHHHHhhhcC-ceEEeec
Q 022253 46 HAVVLLHPF-GFDGILTWQFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 46 ~~vv~lhG~-~~~~~~~~~~~~~~l~~~-~~v~~~d 79 (300)
..||++|.. ..+.. ....+++.|.++ |+++.++
T Consensus 187 g~IiLlHd~~~~t~~-aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAE-ALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHH-HHHHHHHHHHHCCCEEEEhH
Confidence 357777864 33344 666777777766 7777654
No 387
>COG2144 Selenophosphate synthetase-related proteins [General function prediction only]
Probab=24.05 E-value=3e+02 Score=21.89 Aligned_cols=32 Identities=22% Similarity=0.149 Sum_probs=24.3
Q ss_pred ehhHHHHHHHHHhCcccccceEEEcccCCCCc
Q 022253 120 SYGGMVGFKMAEMYPDLVESMVVTCSVMGLTE 151 (300)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~ 151 (300)
|.||.++..+......++.+.+=+.+.+.+..
T Consensus 216 S~gG~iGtl~mlle~S~~ga~vdl~siP~p~~ 247 (324)
T COG2144 216 SNGGLLGTLLMLLEKSRVGAGVDLDSIPYPAD 247 (324)
T ss_pred cCccHHHHHHHHHHhhccCceeeecccCCccc
Confidence 99999988777666567888888887766543
No 388
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=23.99 E-value=2.1e+02 Score=18.52 Aligned_cols=74 Identities=19% Similarity=0.033 Sum_probs=44.0
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh----CCcceEEEEE
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL----GVEKCTLVGV 119 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~lvG~ 119 (300)
..|.|+|.--+..-.. .-..+...+...+.|+-+|...+|. ++...+..+ ....++|-|.
T Consensus 13 ~~~VVifSKs~C~~c~-~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~Gk 76 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCH-RAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGGK 76 (104)
T ss_pred cCCEEEEECCcCchHH-HHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECCE
Confidence 5677888775554444 3344444444447888888664431 334444443 2346778899
Q ss_pred ehhHHHHHHHHHhC
Q 022253 120 SYGGMVGFKMAEMY 133 (300)
Q Consensus 120 S~Gg~~a~~~a~~~ 133 (300)
+.||.--+......
T Consensus 77 ~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 77 FIGGASDLMALHKS 90 (104)
T ss_pred EEcCHHHHHHHHHc
Confidence 99998766655444
No 389
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=23.67 E-value=2e+02 Score=21.81 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=31.8
Q ss_pred HHHHHhhhcC-c-eEEeecCCCCCCCCCCCC-----CCChH---HHHHHHHHHHHHhCCcceEEEEEehhHHHHHHHHH
Q 022253 63 QFQVLALAKT-Y-EVYVPDFLFFGSSVTDRP-----DRTAS---FQAECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 63 ~~~~~~l~~~-~-~v~~~d~~G~G~s~~~~~-----~~~~~---~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~ 131 (300)
..+++.++++ - .++++-++ +|.|..... ..+.+ .+..|+..-+...|.++++++..--|-.-++..+.
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~ 120 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAA 120 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHH
Confidence 3455556655 3 45555554 566554321 12333 44455555555568999888866655443555554
No 390
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=23.53 E-value=3.7e+02 Score=21.13 Aligned_cols=70 Identities=13% Similarity=0.091 Sum_probs=42.4
Q ss_pred HHhhhc--CceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEE-EEEehhHHHHHHHHHhCcc-cccceE
Q 022253 66 VLALAK--TYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTL-VGVSYGGMVGFKMAEMYPD-LVESMV 141 (300)
Q Consensus 66 ~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l-vG~S~Gg~~a~~~a~~~p~-~v~~~v 141 (300)
++.+.+ .+.++.+|-+|....+ ....+.+.++++......+++ +.-++++.-+...+.++.. .+.++|
T Consensus 146 l~~l~~~~~~D~ViIDt~Gr~~~~--------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I 217 (270)
T PRK06731 146 LTYFKEEARVDYILIDTAGKNYRA--------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIV 217 (270)
T ss_pred HHHHHhcCCCCEEEEECCCCCcCC--------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEE
Confidence 344443 3899999998764322 334555666666555445555 4456777777777776533 466666
Q ss_pred EE
Q 022253 142 VT 143 (300)
Q Consensus 142 l~ 143 (300)
+.
T Consensus 218 ~T 219 (270)
T PRK06731 218 FT 219 (270)
T ss_pred EE
Confidence 53
No 391
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=23.18 E-value=2.7e+02 Score=19.41 Aligned_cols=50 Identities=20% Similarity=0.184 Sum_probs=32.9
Q ss_pred HHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccCCC
Q 022253 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 100 ~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
.++...++..+.+.+++.|.+.-..+..-+...+..-++-.++.+.....
T Consensus 77 t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~as~ 126 (157)
T cd01012 77 EAFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACGSR 126 (157)
T ss_pred HHHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCCCC
Confidence 36777888899999999999987665544433222235556666655443
No 392
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.15 E-value=1.6e+02 Score=23.46 Aligned_cols=34 Identities=12% Similarity=0.093 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhCC----cceEEEEEe--hhHHHHHHHHHh
Q 022253 99 AECMAKGLRKLGV----EKCTLVGVS--YGGMVGFKMAEM 132 (300)
Q Consensus 99 ~~~~~~~i~~~~~----~~~~lvG~S--~Gg~~a~~~a~~ 132 (300)
+..+.+++++.+. +++.++|.| +|..++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4567777777653 579999997 899999988764
No 393
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=23.08 E-value=2.4e+02 Score=24.29 Aligned_cols=76 Identities=8% Similarity=-0.038 Sum_probs=50.5
Q ss_pred ceEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCC--------CC-----------------CCCChHHHH
Q 022253 46 HAVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVT--------DR-----------------PDRTASFQA 99 (300)
Q Consensus 46 ~~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~--------~~-----------------~~~~~~~~~ 99 (300)
.-.+.+-|+.-.....-+.+.+.|+.. .+.+.+++++-|+-.. |. ...+.+..-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 346777787765542445567777777 7777778887765432 10 112344455
Q ss_pred HHHHHHHHHhCCcceEEEEEeh
Q 022253 100 ECMAKGLRKLGVEKCTLVGVSY 121 (300)
Q Consensus 100 ~~~~~~i~~~~~~~~~lvG~S~ 121 (300)
+|+.+++.-+|.++|.+|-|.-
T Consensus 177 eDmmeIVqLLGk~rVvfVTHVN 198 (831)
T PRK15180 177 QDMMEIVQLLGRDRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHHhCCCcEEEEEeec
Confidence 7888888888988999999973
No 394
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=23.04 E-value=1.4e+02 Score=23.07 Aligned_cols=56 Identities=13% Similarity=0.057 Sum_probs=32.2
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHH---H------HHHHHHHHHHhCCcceEEEEEeh-hHHHHHHHH
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASF---Q------AECMAKGLRKLGVEKCTLVGVSY-GGMVGFKMA 130 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~---~------~~~~~~~i~~~~~~~~~lvG~S~-Gg~~a~~~a 130 (300)
-+++.+|..|-=..+++........ + ..++.++++.+ ++-+++|-|- ||.+.-...
T Consensus 60 ~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~--kptvlIG~S~~~g~ft~evv 125 (254)
T cd00762 60 KRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAA--KPDFLIGVSRVGGAFTPEVI 125 (254)
T ss_pred ccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhh--CCCEEEEeCCCCCCCCHHHH
Confidence 4899999998533333211000011 1 13566666665 4678999998 886654443
No 395
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=23.04 E-value=2.9e+02 Score=19.78 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=36.9
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEe-hhHHHHHHHHHhC
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS-YGGMVGFKMAEMY 133 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S-~Gg~~a~~~a~~~ 133 (300)
=.|+.++-+.. ..++.+.+++.+.++++..+ ..++++|++ .|+.++-++|.+.
T Consensus 61 d~v~~~~~~~~-------~~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 61 DKVLLVEDPAL-------AGYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred CEEEEEecCcc-------cCCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 46666664422 33567888999999998876 467777766 5777888887764
No 396
>PRK00131 aroK shikimate kinase; Reviewed
Probab=22.91 E-value=1e+02 Score=21.57 Aligned_cols=32 Identities=28% Similarity=0.190 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeec
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPD 79 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d 79 (300)
.+.+|++.|.+++.. ..++..|++. +.++-.|
T Consensus 3 ~~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d 36 (175)
T PRK00131 3 KGPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTD 36 (175)
T ss_pred CCCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEECh
Confidence 456889999998887 4556666665 4444443
No 397
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=22.85 E-value=2.3e+02 Score=21.79 Aligned_cols=57 Identities=11% Similarity=0.246 Sum_probs=40.5
Q ss_pred CChHHHHHHHHHHHHHhCCc----ceEE---EEEehhH-HHHHHHHHhCcccccceEEEcccCCC
Q 022253 93 RTASFQAECMAKGLRKLGVE----KCTL---VGVSYGG-MVGFKMAEMYPDLVESMVVTCSVMGL 149 (300)
Q Consensus 93 ~~~~~~~~~~~~~i~~~~~~----~~~l---vG~S~Gg-~~a~~~a~~~p~~v~~~vl~~~~~~~ 149 (300)
.+..++.+++..++.+.+.+ +.++ .|+++-| ..|..++.-.|..|+++.+++|....
T Consensus 17 ~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv 81 (296)
T KOG3086|consen 17 ASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHV 81 (296)
T ss_pred CCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCccee
Confidence 35567788888888887543 3444 4888755 45556666778889999999997543
No 398
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=22.73 E-value=2.4e+02 Score=24.55 Aligned_cols=39 Identities=18% Similarity=0.151 Sum_probs=25.5
Q ss_pred hHHHHHHHHHH-HHHhCCcceEEEEE-ehhHHHHHHHHHhC
Q 022253 95 ASFQAECMAKG-LRKLGVEKCTLVGV-SYGGMVGFKMAEMY 133 (300)
Q Consensus 95 ~~~~~~~~~~~-i~~~~~~~~~lvG~-S~Gg~~a~~~a~~~ 133 (300)
++.+++|+... .+.++..|-.++|| |=||.+|..++.+.
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence 46677777544 46677778788887 66777777777653
No 399
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.66 E-value=1.3e+02 Score=21.83 Aligned_cols=30 Identities=17% Similarity=0.062 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhCCcceEEEEEehhHHHHH
Q 022253 98 QAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (300)
Q Consensus 98 ~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~ 127 (300)
....+.-.+..++.+.++++|||-=|.+..
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a 96 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKA 96 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHH
Confidence 456677778889999999999997555444
No 400
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=22.49 E-value=2.5e+02 Score=21.25 Aligned_cols=62 Identities=15% Similarity=0.096 Sum_probs=38.6
Q ss_pred HHhhhcCceEEeecCCCCCCCCCCCC--CCChHHHHHHHHHHHHHhCCcceEEEEEehhHHHHH
Q 022253 66 VLALAKTYEVYVPDFLFFGSSVTDRP--DRTASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (300)
Q Consensus 66 ~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~ 127 (300)
+..+++...+=.+-.+=.|+|..... ..+.++-++|+.++++....+-.-+=|.|.|+.++-
T Consensus 56 i~lyaecm~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~ 119 (277)
T KOG2316|consen 56 IDLYAECMGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSD 119 (277)
T ss_pred HHHHHHHhcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhH
Confidence 45555554433333333355554332 345667789999999888644447889999998665
No 401
>PRK06762 hypothetical protein; Provisional
Probab=22.07 E-value=1.3e+02 Score=21.14 Aligned_cols=14 Identities=7% Similarity=0.166 Sum_probs=11.9
Q ss_pred ceEEEEcCCCCCch
Q 022253 46 HAVVLLHPFGFDGI 59 (300)
Q Consensus 46 ~~vv~lhG~~~~~~ 59 (300)
|.+|++.|..+++.
T Consensus 2 ~~li~i~G~~GsGK 15 (166)
T PRK06762 2 TTLIIIRGNSGSGK 15 (166)
T ss_pred CeEEEEECCCCCCH
Confidence 57888999988887
No 402
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=22.06 E-value=2.2e+02 Score=18.07 Aligned_cols=55 Identities=16% Similarity=0.213 Sum_probs=27.9
Q ss_pred HHHHHHhhhcC--ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEE
Q 022253 62 WQFQVLALAKT--YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (300)
Q Consensus 62 ~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~ 119 (300)
....+..++.. -..+..++||. |+.....++.++..+....++..+. ++.+++|.
T Consensus 16 vGkaiN~mad~GiTGFfl~eYrGv--sPd~wkgf~~~EDpE~aik~i~D~s-~~AVlI~t 72 (110)
T COG4075 16 VGKAINIMADAGITGFFLHEYRGV--SPDKWKGFSKEEDPESAIKAIRDLS-DKAVLIGT 72 (110)
T ss_pred HHHHHHHHHhcCcceEEEEEecCc--ChhHhcCcccccCHHHHHHHHHHhh-hceEEEEE
Confidence 34455666665 67888999875 3333334444433333333333332 45555554
No 403
>COG3657 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.01 E-value=2e+02 Score=18.25 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=22.5
Q ss_pred cCcccceeecCCCeEEEEEccCCCCCCceEEEEcCCC
Q 022253 19 VGMTQRTIEIEPGTILNIWVPKKTTKKHAVVLLHPFG 55 (300)
Q Consensus 19 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~vv~lhG~~ 55 (300)
.|+.+-.|....|.+++|...+ ...|+++-|+-
T Consensus 48 eGV~ELRId~GpGyRvY~~~~g----~v~i~lLCgGd 80 (100)
T COG3657 48 EGVSELRIDHGPGYRVYFQQRG----LVLILLLCGGD 80 (100)
T ss_pred cchhhheeccCCceEEEEEecC----cEEEEEeccCc
Confidence 3666777888889999887654 44555665544
No 404
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=22.00 E-value=2.3e+02 Score=20.96 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=29.6
Q ss_pred HHHHHhCCcceEEEEEe-hhHHHHHHHHHhCcccccceEEEccc
Q 022253 104 KGLRKLGVEKCTLVGVS-YGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 104 ~~i~~~~~~~~~lvG~S-~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
+..+.+...++.++|-. +|+.++..++.. -+..+++++.-
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 34566666788888776 788888888764 27778888875
No 405
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=21.95 E-value=3.3e+02 Score=20.06 Aligned_cols=66 Identities=18% Similarity=0.008 Sum_probs=36.2
Q ss_pred CCceEEEEcCCCCCch--hhHHHHHHhhhcC---ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHh
Q 022253 44 KKHAVVLLHPFGFDGI--LTWQFQVLALAKT---YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKL 109 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~--~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~ 109 (300)
.+.|+++++|-.+... +....+.+.|.+. +.+..++--+||........++.....+....+++.+
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff 214 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFF 214 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHH
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHH
Confidence 3567888888665433 1334566667333 7788887778888776655555555555555555554
No 406
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=21.66 E-value=3.5e+02 Score=20.24 Aligned_cols=37 Identities=22% Similarity=0.310 Sum_probs=22.0
Q ss_pred EEEEeeCCCcccCHHHHHHHHHHhC-CCceEEEEcCCC
Q 022253 234 IHLLWGENDKIFDMQVARNLKEQVG-QNATMESIEKAG 270 (300)
Q Consensus 234 ~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 270 (300)
+++|.|..|+..+.+..+.+.+... .+.++.++|-++
T Consensus 2 l~~iGGg~~~~~~~~i~~~~~~~ag~~~~~i~~iptA~ 39 (217)
T cd03145 2 LVLIGGAEDKYDNRAILQRFVARAGGAGARIVVIPAAS 39 (217)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHcCCCCCcEEEEeCCC
Confidence 5666666655455556666666553 356777776554
No 407
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=21.62 E-value=2.3e+02 Score=19.63 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEEEehhHHHHH
Q 022253 95 ASFQAECMAKGLRKLGVEKCTLVGVSYGGMVGF 127 (300)
Q Consensus 95 ~~~~~~~~~~~i~~~~~~~~~lvG~S~Gg~~a~ 127 (300)
.......+.-.+..++.+.++++||+-=|.+..
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~ 70 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKA 70 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHH
Confidence 345566777778888999999999997655553
No 408
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=21.26 E-value=2.5e+02 Score=20.40 Aligned_cols=13 Identities=23% Similarity=0.041 Sum_probs=9.6
Q ss_pred EEeecCCCCCCCCC
Q 022253 75 VYVPDFLFFGSSVT 88 (300)
Q Consensus 75 v~~~d~~G~G~s~~ 88 (300)
+|++| ||||..+.
T Consensus 2 ~I~iD-pGHGg~d~ 14 (189)
T TIGR02883 2 IIVID-PGHGGIDG 14 (189)
T ss_pred EEEEe-CCCCCCCC
Confidence 56777 79997764
No 409
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=21.07 E-value=4.1e+02 Score=20.82 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=35.8
Q ss_pred hcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhC------CcceEEEEEehhHHHHHHHHHhCcc--cccceE
Q 022253 70 AKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLG------VEKCTLVGVSYGGMVGFKMAEMYPD--LVESMV 141 (300)
Q Consensus 70 ~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~~v 141 (300)
.++|.++.+|-+|....+ ....+++..+.+... ...+++|--+..|.-++..+..+-+ .+.++|
T Consensus 152 ~~~~D~ViIDT~G~~~~d--------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~I 223 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQNK--------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGII 223 (272)
T ss_pred HCCCCEEEEeCCCCCcch--------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCEEE
Confidence 344999999999875432 344555555555443 4445555444444444444443322 255666
Q ss_pred EE
Q 022253 142 VT 143 (300)
Q Consensus 142 l~ 143 (300)
+.
T Consensus 224 lT 225 (272)
T TIGR00064 224 LT 225 (272)
T ss_pred EE
Confidence 54
No 410
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.01 E-value=67 Score=25.62 Aligned_cols=17 Identities=24% Similarity=0.550 Sum_probs=14.7
Q ss_pred EEEEEehhHHHHHHHHH
Q 022253 115 TLVGVSYGGMVGFKMAE 131 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~ 131 (300)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 57899999999998863
No 411
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=21.01 E-value=2.5e+02 Score=19.52 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCcceEEEEEehhHHHHHHHHHhCcccccceEEEcccC
Q 022253 100 ECMAKGLRKLGVEKCTLVGVSYGGMVGFKMAEMYPDLVESMVVTCSVM 147 (300)
Q Consensus 100 ~~~~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~ 147 (300)
.++.++++..+.+.++++|-+....+...+......-++-.++.+...
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~ 135 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACA 135 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccccc
Confidence 366778888999999999999865544433322222244455555443
No 412
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=20.90 E-value=1.6e+02 Score=24.41 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=16.3
Q ss_pred eEEEEEehhHHHHHHHHHh
Q 022253 114 CTLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 114 ~~lvG~S~Gg~~a~~~a~~ 132 (300)
-.++|-|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3589999999999988875
No 413
>KOG0743 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=20.88 E-value=3.1e+02 Score=23.38 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=14.2
Q ss_pred EEcCCCCCchhhHHHHHHhhhcC--ceEEeecCC
Q 022253 50 LLHPFGFDGILTWQFQVLALAKT--YEVYVPDFL 81 (300)
Q Consensus 50 ~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~ 81 (300)
+++|-+|++. ..++.+++.. |.|+-+++-
T Consensus 239 LLYGPPGTGK---SS~IaAmAn~L~ydIydLeLt 269 (457)
T KOG0743|consen 239 LLYGPPGTGK---SSFIAAMANYLNYDIYDLELT 269 (457)
T ss_pred eeeCCCCCCH---HHHHHHHHhhcCCceEEeeec
Confidence 4445444444 3344445544 555555554
No 414
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.63 E-value=1.9e+02 Score=22.30 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.9
Q ss_pred EEEEEehhHHHHHHHHHh
Q 022253 115 TLVGVSYGGMVGFKMAEM 132 (300)
Q Consensus 115 ~lvG~S~Gg~~a~~~a~~ 132 (300)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 478999999999999876
No 415
>PF11022 DUF2611: Protein of unknown function (DUF2611); InterPro: IPR021278 This family is conserved in the Dikarya of Fungi. The function is not known.
Probab=20.63 E-value=92 Score=18.48 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhhcccccCCC
Q 022253 279 FVYNRQLKTILASLVHANGQH 299 (300)
Q Consensus 279 ~~~~~~i~~fl~~~~~~~~~~ 299 (300)
.+..+.|.+||+++.....+|
T Consensus 51 ~DeE~fIk~fl~~~~~e~~kh 71 (71)
T PF11022_consen 51 SDEEKFIKEFLKEHEKEEKKH 71 (71)
T ss_pred HHHHHHHHHHHHHHHHhhhcC
Confidence 356788888888887766555
No 416
>PRK14527 adenylate kinase; Provisional
Probab=20.63 E-value=81 Score=22.88 Aligned_cols=28 Identities=25% Similarity=0.109 Sum_probs=19.8
Q ss_pred CCceEEEEcCCCCCchhhHHHHHHhhhcCce
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQVLALAKTYE 74 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~~~l~~~~~ 74 (300)
+.+.++++.|.+++.. ..++..|++.+.
T Consensus 4 ~~~~~i~i~G~pGsGK---sT~a~~La~~~~ 31 (191)
T PRK14527 4 TKNKVVIFLGPPGAGK---GTQAERLAQELG 31 (191)
T ss_pred CCCcEEEEECCCCCCH---HHHHHHHHHHhC
Confidence 4678999999999887 445556665543
No 417
>PF07931 CPT: Chloramphenicol phosphotransferase-like protein; InterPro: IPR012853 The members of this family are all similar to chloramphenicol 3-O phosphotransferase (CPT, Q56148 from SWISSPROT) expressed by Streptomyces venezuelae. Chloramphenicol (Cm) is a metabolite produced by this bacterium that can inhibit ribosomal peptidyl transferase activity and therefore protein production. By transferring a phosphate group to the C-3 hydroxyl group of Cm, CPT inactivates this potentially lethal metabolite [, ]. ; GO: 0005524 ATP binding, 0016740 transferase activity; PDB: 1QHX_A 1QHN_A 1GRR_A 1QHY_A 1QHS_A 1GRQ_A.
Probab=20.53 E-value=1.3e+02 Score=21.62 Aligned_cols=33 Identities=9% Similarity=0.028 Sum_probs=18.6
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeec
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPD 79 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d 79 (300)
-||+++|.+++....-...++..... |-.+.+|
T Consensus 2 ~iI~LNG~sSSGKSsia~~Lq~~~~~p~~~l~~D 35 (174)
T PF07931_consen 2 QIIILNGPSSSGKSSIARALQERLPEPWLHLSVD 35 (174)
T ss_dssp -EEEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHhCcCCeEEEecC
Confidence 38999999988873333333332233 6666666
No 418
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=20.27 E-value=5.2e+02 Score=21.67 Aligned_cols=80 Identities=16% Similarity=0.057 Sum_probs=44.2
Q ss_pred eEEEEcCCCCCchhhHHHHHHhhhcC-ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEe-----
Q 022253 47 AVVLLHPFGFDGILTWQFQVLALAKT-YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVS----- 120 (300)
Q Consensus 47 ~vv~lhG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S----- 120 (300)
.|+..--++.+.. .-..+++.|.+. ..|..+++. .+|..++++.+...+-+++|-+
T Consensus 250 ~l~Y~smyg~T~~-ma~aiaegl~~~gv~v~~~~~~-----------------~~~~~eI~~~i~~a~~~vvGsPT~~~~ 311 (388)
T COG0426 250 DLIYDSMYGNTEK-MAQAIAEGLMKEGVDVEVINLE-----------------DADPSEIVEEILDAKGLVVGSPTINGG 311 (388)
T ss_pred EEEEecccCCHHH-HHHHHHHHhhhcCCceEEEEcc-----------------cCCHHHHHHHHhhcceEEEecCcccCC
Confidence 3444444444444 555666667666 777776654 1133444444444567788887
Q ss_pred ----hhHHHHHHHHHhCcccccceEEEccc
Q 022253 121 ----YGGMVGFKMAEMYPDLVESMVVTCSV 146 (300)
Q Consensus 121 ----~Gg~~a~~~a~~~p~~v~~~vl~~~~ 146 (300)
++..+....+...+.+. +.++++.
T Consensus 312 ~~p~i~~~l~~v~~~~~~~k~--~~vfgS~ 339 (388)
T COG0426 312 AHPPIQTALGYVLALAPKNKL--AGVFGSY 339 (388)
T ss_pred CCchHHHHHHHHHhccCcCce--EEEEecc
Confidence 45556666666666554 3344443
No 419
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown. It is found to the N terminus of the biotin protein ligase catalytic domain []. Biotin protein ligase carries out the post-translational modification of specific proteins by the attachment of biotin. It acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.
Probab=20.25 E-value=4.1e+02 Score=22.04 Aligned_cols=77 Identities=10% Similarity=0.018 Sum_probs=39.6
Q ss_pred EEEEcCCCCCchhhHHHHHHhh----hcCceEEeecCCCCCCCCCCC--------CCCCh-------HHHHHHHHHHHHH
Q 022253 48 VVLLHPFGFDGILTWQFQVLAL----AKTYEVYVPDFLFFGSSVTDR--------PDRTA-------SFQAECMAKGLRK 108 (300)
Q Consensus 48 vv~lhG~~~~~~~~~~~~~~~l----~~~~~v~~~d~~G~G~s~~~~--------~~~~~-------~~~~~~~~~~i~~ 108 (300)
|+.-.|-+.+.. +....+..| ...|.|..++-.---...+.. ...+. ..-.+-|+++++.
T Consensus 3 VlVY~G~G~~~~-sv~~~~~~Lr~~l~p~y~V~~v~~~~l~~~pw~~~~~LlV~PGG~d~~y~~~l~~~g~~~Ir~fV~~ 81 (367)
T PF09825_consen 3 VLVYNGPGTSPE-SVRHTLESLRRLLSPHYAVIPVTADELLNEPWQSKCALLVMPGGADLPYCRSLNGEGNRRIRQFVEN 81 (367)
T ss_pred EEEEecCCCCHH-HHHHHHHHHHHhcCCCeEEEEeCHHHhhcCccccCCcEEEECCCcchHHHHhhChHHHHHHHHHHHc
Confidence 566677777766 666555444 334787777622110000000 00111 1113445555555
Q ss_pred hCCcceEEEEEehhHHHHHHH
Q 022253 109 LGVEKCTLVGVSYGGMVGFKM 129 (300)
Q Consensus 109 ~~~~~~~lvG~S~Gg~~a~~~ 129 (300)
|. ..+|.+.||+.+...
T Consensus 82 -GG---~YlGiCAGaY~as~~ 98 (367)
T PF09825_consen 82 -GG---GYLGICAGAYYASSR 98 (367)
T ss_pred -CC---cEEEECcchhhhcce
Confidence 32 367999999988754
No 420
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=20.19 E-value=1.5e+02 Score=15.51 Aligned_cols=31 Identities=23% Similarity=0.181 Sum_probs=20.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 022253 73 YEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRK 108 (300)
Q Consensus 73 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~ 108 (300)
|.+..+|+||+-. ...+.++..+.+.+++..
T Consensus 14 y~~~~pdlpg~~t-----~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 14 YVAYFPDLPGCFT-----QGDTLEEALENAKEALEL 44 (48)
T ss_dssp EEEEETTCCTCEE-----EESSHHHHHHHHHHHHHH
T ss_pred EEEEeCCccChhh-----cCCCHHHHHHHHHHHHHH
Confidence 8899999998642 224567766666666543
No 421
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=20.09 E-value=4.7e+02 Score=21.09 Aligned_cols=74 Identities=18% Similarity=0.111 Sum_probs=45.0
Q ss_pred CceEEEEcCCCCCchhhHHHHHHhhhcC--ceEEeec----CCCC--CCCCC-----------------CCCCCChHHHH
Q 022253 45 KHAVVLLHPFGFDGILTWQFQVLALAKT--YEVYVPD----FLFF--GSSVT-----------------DRPDRTASFQA 99 (300)
Q Consensus 45 ~~~vv~lhG~~~~~~~~~~~~~~~l~~~--~~v~~~d----~~G~--G~s~~-----------------~~~~~~~~~~~ 99 (300)
.+.+++|-|-.+++. ..++=.|++. -.|+..| ++|. |.... +...++..++.
T Consensus 2 ~~~~i~I~GPTAsGK---T~lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~ 78 (308)
T COG0324 2 KPKLIVIAGPTASGK---TALAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQ 78 (308)
T ss_pred CccEEEEECCCCcCH---HHHHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHH
Confidence 356777777766666 3344456665 5788888 3443 22111 12347778888
Q ss_pred HHHHHHHHHhCC--cceEEEEEeh
Q 022253 100 ECMAKGLRKLGV--EKCTLVGVSY 121 (300)
Q Consensus 100 ~~~~~~i~~~~~--~~~~lvG~S~ 121 (300)
+++...++.+.. +-.++||-|+
T Consensus 79 ~~a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 79 RDALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHHhCCCCcEEEccHH
Confidence 888888887733 4567777553
No 422
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=20.03 E-value=3.5e+02 Score=22.29 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=52.2
Q ss_pred ceEEEEcCCCCCch------hhHHHHHHhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEE
Q 022253 46 HAVVLLHPFGFDGI------LTWQFQVLALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGV 119 (300)
Q Consensus 46 ~~vv~lhG~~~~~~------~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~ 119 (300)
..+|++|+-..+.. +.|..+.+.+.+.-.+-.+|.-..|..++ +.+..+..++-+++. ..=+++..
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG-----~~d~DA~avR~F~~~---g~~~~laQ 269 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASG-----DLDKDAQAVRLFVED---GHEILLAQ 269 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccC-----CchhhHHHHHHHHHc---CCceEeeh
Confidence 36899997654432 38888887777665555566666665443 334445555555544 23356666
Q ss_pred ehhHHHHHHHHHhCcccccceEEEcc
Q 022253 120 SYGGMVGFKMAEMYPDLVESMVVTCS 145 (300)
Q Consensus 120 S~Gg~~a~~~a~~~p~~v~~~vl~~~ 145 (300)
|+.-.+.+ |.++|.++-+++.
T Consensus 270 SyAKNMGL-----YgERvGa~svvc~ 290 (427)
T KOG1411|consen 270 SYAKNMGL-----YGERVGALSVVCK 290 (427)
T ss_pred hhhhhcch-----hhhccceeEEEec
Confidence 66555443 5678888766653
No 423
>PF10443 RNA12: RNA12 protein; InterPro: IPR018850 Mitochondrial escape protein 2 (also known as RNA12) plays a role in maintaining the mitochondrial genome and in controlling mtDNA escape [, ]. It is also involved in the regulation of mtDNA nucleotide structure and number []. Additionally, this protein have a dispensable role in the early maturation of pre-rRNA [].
Probab=20.02 E-value=1.5e+02 Score=25.05 Aligned_cols=70 Identities=13% Similarity=-0.020 Sum_probs=41.2
Q ss_pred CCceEEEEcCCCCCchhhHHHHH--HhhhcCceEEeecCCCCCCCCCCCCCCChHHHHHHHHHHHHHhCCcceEEEEEeh
Q 022253 44 KKHAVVLLHPFGFDGILTWQFQV--LALAKTYEVYVPDFLFFGSSVTDRPDRTASFQAECMAKGLRKLGVEKCTLVGVSY 121 (300)
Q Consensus 44 ~~~~vv~lhG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~lvG~S~ 121 (300)
...++|++||=-|++. ..++ +.|..+-+|+.+|..---.+. .-..-|..+..++|..|++=+-.|+
T Consensus 15 ~~~TFIvV~GPrGSGK---~elV~d~~L~~r~~vL~IDC~~i~~ar---------~D~~~I~~lA~qvGY~PvFsw~nSi 82 (431)
T PF10443_consen 15 NPNTFIVVQGPRGSGK---RELVMDHVLKDRKNVLVIDCDQIVKAR---------GDAAFIKNLASQVGYFPVFSWMNSI 82 (431)
T ss_pred CCCeEEEEECCCCCCc---cHHHHHHHHhCCCCEEEEEChHhhhcc---------ChHHHHHHHHHhcCCCcchHHHHHH
Confidence 3457999999888777 4454 566666779999976322211 1234455555555555555444444
Q ss_pred hHHH
Q 022253 122 GGMV 125 (300)
Q Consensus 122 Gg~~ 125 (300)
.+++
T Consensus 83 ss~I 86 (431)
T PF10443_consen 83 SSFI 86 (431)
T ss_pred HHHH
Confidence 4443
Done!