Query 022254
Match_columns 300
No_of_seqs 195 out of 410
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:26:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.6 5.2E-15 1.8E-19 137.1 13.5 175 58-299 2-249 (285)
2 4af8_A Metacaspase MCA2; hydro 99.5 5.4E-13 1.8E-17 129.0 17.2 193 54-290 87-323 (367)
3 4f6o_A Metacaspase-1; rossmann 99.5 1E-12 3.5E-17 126.3 15.6 189 54-294 48-322 (350)
4 3uoa_B Mucosa-associated lymph 99.0 1.6E-08 5.3E-13 98.5 16.6 174 58-299 4-197 (390)
5 3sir_A Caspase; hydrolase; 2.6 96.7 0.019 6.5E-07 52.4 12.6 174 58-298 19-219 (259)
6 2j32_A Caspase-3; Pro-caspase3 96.7 0.0094 3.2E-07 54.1 10.0 178 58-299 15-213 (250)
7 4ehd_A Caspase-3; caspase, apo 96.6 0.016 5.4E-07 53.7 11.0 179 57-299 42-241 (277)
8 1m72_A Caspase-1; caspase, cys 96.5 0.018 6.3E-07 52.9 11.0 177 58-298 31-229 (272)
9 3e4c_A Caspase-1; zymogen, inf 96.4 0.07 2.4E-06 49.9 14.7 182 56-299 57-273 (302)
10 3h11_B Caspase-8; cell death, 96.4 0.036 1.2E-06 50.9 12.2 180 58-299 16-232 (271)
11 1f1j_A Caspase-7 protease; cas 96.3 0.017 5.9E-07 54.1 9.8 178 57-298 67-268 (305)
12 2h54_A Caspase-1; allosteric s 96.1 0.039 1.3E-06 47.9 10.6 120 58-224 42-170 (178)
13 3od5_A Caspase-6; caspase doma 96.0 0.06 2E-06 49.6 11.7 179 57-299 19-231 (278)
14 2nn3_C Caspase-1; cysteine pro 96.0 0.045 1.5E-06 51.5 11.0 178 58-299 59-258 (310)
15 1nw9_B Caspase 9, apoptosis-re 95.8 0.12 4E-06 47.4 12.5 119 58-224 20-152 (277)
16 2fp3_A Caspase NC; apoptosis, 95.1 0.28 9.7E-06 46.0 12.9 120 58-224 60-188 (316)
17 1pyo_A Caspase-2; apoptosis, c 91.9 0.83 2.8E-05 39.1 9.2 122 57-225 31-159 (167)
18 2dko_A Caspase-3; low barrier 89.6 0.54 1.9E-05 39.4 5.7 119 58-225 15-140 (146)
19 3h11_A CAsp8 and FADD-like apo 86.4 1.9 6.6E-05 39.5 7.8 110 58-222 42-154 (272)
20 1qtn_A Caspase-8; apoptosis, d 84.1 0.38 1.3E-05 41.1 1.7 120 58-225 22-155 (164)
21 3p45_A Caspase-6; protease, hu 81.3 6.3 0.00022 34.2 8.5 122 57-227 42-170 (179)
22 2ql9_A Caspase-7; cysteine pro 68.1 2 6.8E-05 37.1 1.7 118 58-224 43-167 (173)
23 3ca8_A Protein YDCF; two domai 32.8 36 0.0012 30.8 4.0 21 79-99 98-119 (266)
24 2r8q_A Class I phosphodiestera 31.7 21 0.00073 33.8 2.3 25 68-92 96-121 (359)
25 1tbf_A CGMP-specific 3',5'-cyc 31.6 26 0.00089 33.1 2.9 25 68-92 97-122 (347)
26 1taz_A Calcium/calmodulin-depe 30.2 20 0.00067 34.2 1.8 24 69-92 79-103 (365)
27 1f0j_A PDE4B, phosphodiesteras 26.8 22 0.00076 34.0 1.5 25 68-92 79-104 (377)
28 1y2k_A DPDE3, PDE43, CAMP-spec 25.3 25 0.00084 33.2 1.5 25 68-92 92-117 (349)
29 3itu_A CGMP-dependent 3',5'-cy 24.0 30 0.001 32.7 1.8 25 68-92 78-103 (345)
30 3m7v_A Phosphopentomutase; str 24.0 25 0.00085 31.3 1.2 22 160-181 324-345 (413)
31 1cvr_A Gingipain R, RGPB; casp 23.9 31 0.001 33.6 1.9 47 171-226 204-250 (435)
32 4gdk_A Ubiquitin-like protein 23.3 54 0.0018 25.2 2.9 34 137-181 28-61 (91)
33 3bjc_A CGMP-specific 3',5'-cyc 20.6 51 0.0017 34.3 2.9 26 68-93 612-638 (878)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.61 E-value=5.2e-15 Score=137.12 Aligned_cols=175 Identities=15% Similarity=0.163 Sum_probs=124.6
Q ss_pred CCeeEEEEeccCC----Cccch-----hhhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccC
Q 022254 58 GTRWAVLLAGSNG----FWNYR-----HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYK 128 (300)
Q Consensus 58 ~~~wAVLVagS~g----w~NYR-----Hqadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~ 128 (300)
+++||+||+-+++ |.+.. =..|+..+.++|++.||+ |++++.++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~---v~~l~~~~------------------------ 54 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFA---VTTLMTKA------------------------ 54 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCE---EEEEEGGG------------------------
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCc---eEEecCCc------------------------
Confidence 4789999988874 21111 237999999999999997 66665321
Q ss_pred CcCcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------------CcccCCCCCCcCHH
Q 022254 129 GVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------------GVLGMPTSRYIYAD 195 (300)
Q Consensus 129 gv~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~-------------g~l~fpd~~~L~a~ 195 (300)
.|.+|+++.|..- +-+..++|.+||||+|||.. ++|...|. .|..+
T Consensus 55 ----------~t~~~i~~al~~l----------~~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~-~i~~~ 113 (285)
T 3bij_A 55 ----------ATRAKVIDAIGKA----------AKALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDG-ELIDD 113 (285)
T ss_dssp ----------CCHHHHHHHHHHH----------HHHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSS-EEEHH
T ss_pred ----------cCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCC-CccHH
Confidence 5788998888621 11346789999999999962 35555555 47888
Q ss_pred HHHHHHHHHHHcCCCceEEEEeccccccccccc----------------------cCC----------------------
Q 022254 196 ELIDVLKKKHASGNYKSLVFYLEACESGSIFEG----------------------LLP---------------------- 231 (300)
Q Consensus 196 dL~~~L~~m~~~~~Ykklvf~vEAC~SGSmfe~----------------------llp---------------------- 231 (300)
+|.+.|+.+. .-+++++|+|||+||++.++ .+|
T Consensus 114 ~l~~~l~~l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 190 (285)
T 3bij_A 114 ELYALLGKFA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKT 190 (285)
T ss_dssp HHHHHHTTSC---SSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHC
T ss_pred HHHHHHHhcc---CCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhc
Confidence 9999887762 35789999999999998762 011
Q ss_pred -------CCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHHHHhhcccCCCChhhHHHHHHHHHc
Q 022254 232 -------EGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 232 -------~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
...++++++|+.++|.||-. ...+ +|+.+.++-+.... ..-|+.+.++.|++
T Consensus 191 ~~~~~~~~~~~~i~lsa~~~~q~A~e~----------~~~G-----~FT~aLl~~L~~~~-~~~s~~~l~~~v~~ 249 (285)
T 3bij_A 191 KKVDLADVKASILLISGCQDNQLSQDG----------AFNG-----AFTGQLLRVWKNGL-YKGSYRSFHKAIVR 249 (285)
T ss_dssp CCCCTTTCSSEEEEEESSCTTSCCEEC----------SSSC-----HHHHHHHHHHGGGT-CCSCHHHHHHHHHH
T ss_pred ccccccCCCCCEEEEEeCCCCcccccc----------ccCC-----HHHHHHHHHHhhCC-CCcCHHHHHHHHHH
Confidence 12368999999999999863 1234 89999998776543 22466666776653
No 2
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=99.50 E-value=5.4e-13 Score=128.96 Aligned_cols=193 Identities=18% Similarity=0.143 Sum_probs=127.4
Q ss_pred CCCCCCeeEEEEeccCCC--ccch-hhhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 54 DDSVGTRWAVLLAGSNGF--WNYR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 54 ~~~~~~~wAVLVagS~gw--~NYR-Hqadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
..+.+++||+||+-+.+= .+-+ =..|+-.+.+.|++.||+.++|+++.-++- .| +
T Consensus 87 ~~~~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~-----~p--~--------------- 144 (367)
T 4af8_A 87 PLPGQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDN-----FP--G--------------- 144 (367)
T ss_dssp CCTTCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTT-----CT--T---------------
T ss_pred CCCCCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEeccccc-----cc--c---------------
Confidence 345689999999887421 1111 136999999999999999999998864431 11 1
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC---------C---cccCCCC---CCcCHH
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP---------G---VLGMPTS---RYIYAD 195 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~---------g---~l~fpd~---~~L~a~ 195 (300)
.....|.+|+++.|.-- +-+..++|.+||||+|||.. | .|.-.|. ..|..+
T Consensus 145 ----~~~~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~dd 210 (367)
T 4af8_A 145 ----RTDQPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDD 210 (367)
T ss_dssp ----CCBCCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHH
T ss_pred ----cccCCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHH
Confidence 13467999999988721 11356889999999999982 2 2433341 257888
Q ss_pred HHHHHH-HHHHHcCCCceEEEEeccccccccccccC-----------------------CCCCcEEEEeecCCCCccccc
Q 022254 196 ELIDVL-KKKHASGNYKSLVFYLEACESGSIFEGLL-----------------------PEGLNIYATTASNAEESSWGT 251 (300)
Q Consensus 196 dL~~~L-~~m~~~~~Ykklvf~vEAC~SGSmfe~ll-----------------------p~~~nV~~iTASn~~EsSys~ 251 (300)
||.+.| +.+ ..-+++++|+|+||||++.+--. +..-+++.++|+..+|.|.-.
T Consensus 211 eL~~lLv~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~ 287 (367)
T 4af8_A 211 DIHKLLFSRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADV 287 (367)
T ss_dssp HHHHHHTTTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCC
T ss_pred HHHHHHHHhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhh
Confidence 998874 443 23479999999999999977210 012268999999999999886
Q ss_pred cCCCCC-CCCCCCCccchhhHHHHHHHhhcccC-CCChhhH
Q 022254 252 YCPGEI-PGPPPEYSTCLGDLYSIAWMEDSDIH-NLRTETL 290 (300)
Q Consensus 252 yc~~~~-~~~~~~~~TclgD~fS~~wme~~~~~-~l~~etl 290 (300)
.-.... .-.....| +||+++++-+... +++-..|
T Consensus 288 ~~~~~f~~g~~~~~G-----afTyali~~L~~~~~~Ty~~L 323 (367)
T 4af8_A 288 KNTATFGTGSTGAGG-----AATQCITCMLMNNQSLSYGKL 323 (367)
T ss_dssp C-------CCCBCBS-----HHHHHHHHHHHCCSCCBHHHH
T ss_pred hccccccccccCccc-----HHHHHHHHHHHhCCCCCHHHH
Confidence 421000 00012334 9999999988754 4444333
No 3
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1e-12 Score=126.27 Aligned_cols=189 Identities=22% Similarity=0.320 Sum_probs=120.3
Q ss_pred CCCCCCeeEEEEeccCCCcc---ch-hhhHHHHHHHHHHh-CCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccC
Q 022254 54 DDSVGTRWAVLLAGSNGFWN---YR-HQADICHAYQLLRK-GGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYK 128 (300)
Q Consensus 54 ~~~~~~~wAVLVagS~gw~N---YR-Hqadv~~~Yq~Lk~-~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~ 128 (300)
....+++|||||+-+ +|.. -+ =..|+-.+.++|++ .||++++|+++.-++ .+|
T Consensus 48 s~~~grr~ALlIGIn-~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~-----~~~---------------- 105 (350)
T 4f6o_A 48 SQCTGRRKALIIGIN-YIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQ-----NDL---------------- 105 (350)
T ss_dssp CCCCSCEEEEEEECC-CTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTS-----SCG----------------
T ss_pred CCCCCCEEEEEEEeC-CCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccc-----ccc----------------
Confidence 345689999999885 3221 11 13699999999987 599999998875432 111
Q ss_pred CcCcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----------C---cccCCCC---CCc
Q 022254 129 GVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----------G---VLGMPTS---RYI 192 (300)
Q Consensus 129 gv~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----------g---~l~fpd~---~~L 192 (300)
....|.+|+++.|.- + +-+..++|.+||||+|||.. | .|.-.|. ..|
T Consensus 106 -------~~~pTr~nI~~aL~~----L------~~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I 168 (350)
T 4f6o_A 106 -------VRVPTRANMIRAMQW----L------VKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPI 168 (350)
T ss_dssp -------GGSCCHHHHHHHHHH----H------HTTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCE
T ss_pred -------ccCCCHHHHHHHHHH----H------HHhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcc
Confidence 124689999999872 1 11346789999999999972 1 2444341 258
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEEeccccccccccc--------cC----------------------------------
Q 022254 193 YADELIDVLKKKHASGNYKSLVFYLEACESGSIFEG--------LL---------------------------------- 230 (300)
Q Consensus 193 ~a~dL~~~L~~m~~~~~Ykklvf~vEAC~SGSmfe~--------ll---------------------------------- 230 (300)
..+||.+.|.+. ...=.++++|+|+||||++.+- .+
T Consensus 169 ~ddeL~~~L~~~--l~~g~~vt~IlD~ChSGt~ldlp~~~~~~g~~~e~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~ 246 (350)
T 4f6o_A 169 IDDEMHDIMVKP--LQQGVRLTALFDSCHSGTVLDLPYTYSTKGIIKEPNIWKDVGQDGLQAAISYATGNRAALIGSLGS 246 (350)
T ss_dssp EHHHHHHHHTTT--CCTTCEEEEEECSSSCTTTTCCSEEEETTEEEECCCC-----------------------------
T ss_pred cHHHHHHHHHhh--cCCCCeEEEEEccCCCCcccccccccccccccCcchhhhhccccccchhhhhccccchhhcccchh
Confidence 899999888642 1334689999999999999751 00
Q ss_pred ----------------------CCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHHHHhhcccC-CCCh
Q 022254 231 ----------------------PEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMEDSDIH-NLRT 287 (300)
Q Consensus 231 ----------------------p~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~wme~~~~~-~l~~ 287 (300)
...-+++.++++..+|.|.-+.-.+ ...| +||+++++-+... +++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~SgCkD~QtSaD~~~~g------~~~G-----AmTyafi~aL~~~p~~tY 315 (350)
T 4f6o_A 247 IFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSADAVEDG------QNTG-----AMSHAFIKVMTLQPQQSY 315 (350)
T ss_dssp ----------------------CCCSEEEEEEEEC-------------------CCC-----HHHHHHHHHHHHCCCCBH
T ss_pred hhhhhccccccccchhhhhhccCCCCCEEEEEecCCCCchhhhccCC------ceee-----hhHHHHHHHHHHCCCCCH
Confidence 0012678888888888888776433 3455 9999999988865 5665
Q ss_pred hhHHHHH
Q 022254 288 ETLHQQY 294 (300)
Q Consensus 288 etl~~q~ 294 (300)
..|.++-
T Consensus 316 ~~Ll~~~ 322 (350)
T 4f6o_A 316 LSLLQNM 322 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.96 E-value=1.6e-08 Score=98.55 Aligned_cols=174 Identities=13% Similarity=0.137 Sum_probs=118.9
Q ss_pred CCeeEEEEeccCCCc--cch-hhhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCcCC
Q 022254 58 GTRWAVLLAGSNGFW--NYR-HQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (300)
Q Consensus 58 ~~~wAVLVagS~gw~--NYR-Hqadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~iDY 134 (300)
++++|+||+-+++-. +-+ =..|+-.+.+.|++.||+ +.++ .
T Consensus 4 ~~r~ALIIGn~~Y~~~~~L~ga~~DA~~L~~~L~~lGF~---V~~l--~------------------------------- 47 (390)
T 3uoa_B 4 KDKVALLIGNMNYREHPKLKAPLVDVYELTNLLRQLDFK---VVSL--L------------------------------- 47 (390)
T ss_dssp SCEEEEEEECCCCSSSCCCSTHHHHHHHHHHHHHHTTCE---EEEE--E-------------------------------
T ss_pred CCCEEEEEEecCCCCcccCCChHHHHHHHHHHHHHcCCe---EEEe--e-------------------------------
Confidence 689999998776532 111 136999999999999996 2221 1
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCC-------CcCHHHHHHHHHH
Q 022254 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSR-------YIYADELIDVLKK 203 (300)
Q Consensus 135 ~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~-------~L~a~dL~~~L~~ 203 (300)
++|.+++.+.|.--. + ...+.|.++|||+|||.. ++|.-.|.. .+.-++|.+.|+.
T Consensus 48 ---DlT~~eI~~aL~~f~--------~--~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~ 114 (390)
T 3uoa_B 48 ---DLTEYEMRNAVDEFL--------L--LLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE 114 (390)
T ss_dssp ---SCCHHHHHHHHHHHH--------H--TCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHHH--------h--hCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh
Confidence 147888888887211 1 124679999999999954 454433332 3666777776665
Q ss_pred HHHcCCCceEEEEeccccccccccc------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHHHH
Q 022254 204 KHASGNYKSLVFYLEACESGSIFEG------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAWM 277 (300)
Q Consensus 204 m~~~~~Ykklvf~vEAC~SGSmfe~------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~wm 277 (300)
..-|..+|++|||+++..+++ ..|...++++..|+.+++.||-..-++ ..+ -+|..+..
T Consensus 115 ----~~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~~g----S~FtqaL~ 179 (390)
T 3uoa_B 115 ----KETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------LAN----GIFMKFLK 179 (390)
T ss_dssp ----TTCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------TCC----CHHHHHHT
T ss_pred ----cCCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------CCC----CHHHHHHH
Confidence 355788999999999755542 234455899999999999999764211 122 28999998
Q ss_pred hhcccCCCChhhHHHHHHHHHc
Q 022254 278 EDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 278 e~~~~~~l~~etl~~q~~~vk~ 299 (300)
+-+.. ..+|.+.+..|.+
T Consensus 180 e~L~~----~~dl~~LLt~Vn~ 197 (390)
T 3uoa_B 180 DRLLE----DKKITVLLDEVAE 197 (390)
T ss_dssp TTTTC----SSCHHHHHHHHHH
T ss_pred HHHcc----CCCHHHHHHHHHH
Confidence 88865 4677777777753
No 5
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=96.72 E-value=0.019 Score=52.42 Aligned_cols=174 Identities=14% Similarity=0.197 Sum_probs=101.3
Q ss_pred CCeeEEEEeccCCCc---cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCc
Q 022254 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (300)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~i 132 (300)
....|+||+=+++-. .-|.- .|+-.+-++|++.||. |..+.|
T Consensus 19 ~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~-----V~~~~d---------------------------- 65 (259)
T 3sir_A 19 NRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFE-----VTVYKD---------------------------- 65 (259)
T ss_dssp EEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCE-----EEEEEE----------------------------
T ss_pred CccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEeC----------------------------
Confidence 468999998887653 23444 5899999999999996 222332
Q ss_pred CCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHHHcC----
Q 022254 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASG---- 208 (300)
Q Consensus 133 DY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~~~~---- 208 (300)
+|.+.+.+.|.--. .+ +-...|-+++|+.+||..|.|.=-|+. + .|.+.++.+...+
T Consensus 66 ------lt~~em~~~l~~~~-------~~--~h~~~d~~v~~~lsHG~~g~i~~~D~~-v---~l~~i~~~f~~~~cpsL 126 (259)
T 3sir_A 66 ------CRYKDILRTIEYSA-------SQ--NHSDSDCILVAILSHGEMGYIYAKDTQ-Y---KLDNIWSFFTANHCPSL 126 (259)
T ss_dssp ------CSHHHHHHHHHHHH-------TS--CCTTEEEEEEEEEECTTCCCCCCTTHH-H---HHHHTTGGGSTTTCGGG
T ss_pred ------CCHHHHHHHHHHHH-------Hh--hccCCCEEEEEEecCCCCCeEEeCCCc-E---EHHHHHHHhhhccCccc
Confidence 57888888887311 01 123468899999999999977544432 3 4444444443211
Q ss_pred CCceEEEEeccccccccccc------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhh
Q 022254 209 NYKSLVFYLEACESGSIFEG------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGD 270 (300)
Q Consensus 209 ~Ykklvf~vEAC~SGSmfe~------------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD 270 (300)
.=|=.+|+++||...-+-.+ ..|...++++.=|+-++.-||-. +..++
T Consensus 127 ~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS---- 192 (259)
T 3sir_A 127 AGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMSYKIPVHADFLIAYSTVPGFYSWRN----------TTRGS---- 192 (259)
T ss_dssp SSSCEEEEEEEETTSCEEC-----------------CEECCCCTTEEEEEEEECCSCCCSS----------CCCSC----
T ss_pred cCCCCEEEEecCCCCcccCCcccccCcccccCcccccccCCCCCCEEEEEECCCCeEeecC----------CCCCc----
Confidence 22456899999986543222 12333356655555555555532 12333
Q ss_pred HHHHHHHhhcccCCCChhhHHHHHHHHH
Q 022254 271 LYSIAWMEDSDIHNLRTETLHQQYELVR 298 (300)
Q Consensus 271 ~fS~~wme~~~~~~l~~etl~~q~~~vk 298 (300)
+|--+..+.+..+ -..+.|.+.+..|.
T Consensus 193 ~fiq~L~~~l~~~-~~~~dl~~ilt~V~ 219 (259)
T 3sir_A 193 WFMQSLCAELAAN-GKRLDILTLLTFVC 219 (259)
T ss_dssp HHHHHHHHHHHHH-TTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCCCCHHHHHHHHH
Confidence 6666666666543 22345666665554
No 6
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=96.65 E-value=0.0094 Score=54.07 Aligned_cols=178 Identities=12% Similarity=0.147 Sum_probs=107.4
Q ss_pred CCeeEEEEeccCCCc----cchhhh--HHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcC
Q 022254 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (300)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHqa--dv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~ 131 (300)
....|+||.=+++.. .-|..+ |+-.+-++|++.|+. |..+.|
T Consensus 15 ~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~-----V~~~~d--------------------------- 62 (250)
T 2j32_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND--------------------------- 62 (250)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES---------------------------
T ss_pred CccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCE-----EEEEeC---------------------------
Confidence 577999998877653 245553 889999999999995 222222
Q ss_pred cCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 022254 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (300)
Q Consensus 132 iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (300)
+|.+.+.+.|+--. .+ +-...|-+++||.+||..|.+.-.|+ .+.-++|.+.|+.-+ ..-.=
T Consensus 63 -------lt~~em~~~l~~~~-------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~g 125 (250)
T 2j32_A 63 -------LTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (250)
T ss_dssp -------CCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred -------CCHHHHHHHHHHHH-------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcC
Confidence 57788888877211 11 11345789999999999987665555 466666555554300 00122
Q ss_pred ceEEEEeccccccccccc--------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHHH
Q 022254 211 KSLVFYLEACESGSIFEG--------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIAW 276 (300)
Q Consensus 211 kklvf~vEAC~SGSmfe~--------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~w 276 (300)
|=.+|+++||...-+-.+ ..|...++++.=|+.++.-||-. +..++ +|--+.
T Consensus 126 KPKlf~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~----------~~~gS----~fiq~L 191 (250)
T 2j32_A 126 KPKLFIIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRN----------SKDGS----WFIQSL 191 (250)
T ss_dssp SCEEEEEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEE----------TTTEE----HHHHHH
T ss_pred CCeEEEEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecC----------CCCCc----HHHHHH
Confidence 345889999975433211 13433466666666666555542 12333 666666
Q ss_pred HhhcccCCCChhhHHHHHHHHHc
Q 022254 277 MEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 277 me~~~~~~l~~etl~~q~~~vk~ 299 (300)
.+.+..+ -..+.|.+.+..|++
T Consensus 192 ~~~l~~~-~~~~dl~~ilt~V~~ 213 (250)
T 2j32_A 192 CAMLKQY-ADKLEFMHILTRVNR 213 (250)
T ss_dssp HHHHHHH-TTTSCHHHHHHHHHH
T ss_pred HHHHHHh-CCCCCHHHHHHHHHH
Confidence 6666542 233567777766643
No 7
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=96.56 E-value=0.016 Score=53.67 Aligned_cols=179 Identities=12% Similarity=0.158 Sum_probs=110.2
Q ss_pred CCCeeEEEEeccCCCc----cchhhh--HHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHqa--dv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
.....|+||+=+++-. .-|..+ |+-.+-++|++.||. |..+.|
T Consensus 42 ~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------------- 90 (277)
T 4ehd_A 42 PEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND-------------------------- 90 (277)
T ss_dssp SEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------------
T ss_pred CCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEecC--------------------------
Confidence 4678999998887753 356665 899999999999995 222332
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (300)
+|.+.+.+.|.--. .+ +-...|-+++++.+||..|.|.--|+. +.-++|.+.|..-+ ..-.
T Consensus 91 --------lt~~em~~~l~~f~-------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 152 (277)
T 4ehd_A 91 --------LTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLT 152 (277)
T ss_dssp --------CCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHHHH-------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhc
Confidence 57888888887311 11 123468888999999999987666663 66666555543210 0012
Q ss_pred CceEEEEecccccccccccc--------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHH
Q 022254 210 YKSLVFYLEACESGSIFEGL--------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (300)
Q Consensus 210 Ykklvf~vEAC~SGSmfe~l--------------lp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~ 275 (300)
-|=.+|+++||...-+-.++ .|...++++.=|+-++.-||-. +..++ +|--+
T Consensus 153 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS----~fIq~ 218 (277)
T 4ehd_A 153 GKPKLFIIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN----------SKDGS----WFIQS 218 (277)
T ss_dssp TSCEEEEEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE----------TTTEE----HHHHH
T ss_pred CCccEEEEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC----------CCCCc----HHHHH
Confidence 34568999999865432221 2333456666666666555542 12333 67766
Q ss_pred HHhhcccCCCChhhHHHHHHHHHc
Q 022254 276 WMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 276 wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
..+.+..+ -..+.|.+.+..|.+
T Consensus 219 L~~~l~~~-~~~~dl~~ilt~V~~ 241 (277)
T 4ehd_A 219 LCAMLKQY-ADKLEFMHILTRVNR 241 (277)
T ss_dssp HHHHHHHH-TTTSCHHHHHHHHHH
T ss_pred HHHHHHHH-CCCCCHHHHHHHHHH
Confidence 66666553 123566666666543
No 8
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=96.50 E-value=0.018 Score=52.92 Aligned_cols=177 Identities=16% Similarity=0.203 Sum_probs=107.4
Q ss_pred CCeeEEEEeccCCCc---cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCc
Q 022254 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (300)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~i 132 (300)
....|+||.=+++-. .-|.. .|+-.+-++|++.|+. |..+.|
T Consensus 31 ~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~-----V~~~~d---------------------------- 77 (272)
T 1m72_A 31 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFPN---------------------------- 77 (272)
T ss_dssp EEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES----------------------------
T ss_pred CCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEecC----------------------------
Confidence 478999998776542 23443 6888999999999994 222222
Q ss_pred CCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCCc
Q 022254 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (300)
Q Consensus 133 DY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Yk 211 (300)
+|.+.+.+.|.--. .+ +-...|-+++||.+||..|+|.--|+. +.-++|.+.|+.-. ..-.=|
T Consensus 78 ------lt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gK 141 (272)
T 1m72_A 78 ------LKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 141 (272)
T ss_dssp ------CCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTS
T ss_pred ------cCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 57788888877211 01 113457899999999999988776764 66566655553200 001224
Q ss_pred eEEEEeccccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHH
Q 022254 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (300)
Q Consensus 212 klvf~vEAC~SGSmfe~----------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~ 275 (300)
=.+|+++||...-+-.+ ..|...++++.=|+.++.-||-. +..++ +|--+
T Consensus 142 PKlffiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~----------~~~GS----~fiq~ 207 (272)
T 1m72_A 142 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTRGS----WFMQA 207 (272)
T ss_dssp CEEEEEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEE----------TTTEE----HHHHH
T ss_pred ceEEEEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecC----------CCCCC----HHHHH
Confidence 45888999985433111 13333467777677776666642 12333 67666
Q ss_pred HHhhcccCCCChhhHHHHHHHHH
Q 022254 276 WMEDSDIHNLRTETLHQQYELVR 298 (300)
Q Consensus 276 wme~~~~~~l~~etl~~q~~~vk 298 (300)
..+.+..+ -..+.|.+.+..|.
T Consensus 208 L~~~l~~~-~~~~dl~~ilt~V~ 229 (272)
T 1m72_A 208 LCEELRYA-GTERDILTLLTFVC 229 (272)
T ss_dssp HHHHHHHH-TTTSCHHHHHHHHH
T ss_pred HHHHHHhh-CCCCCHHHHHHHHH
Confidence 66666553 12355666666654
No 9
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=96.44 E-value=0.07 Score=49.86 Aligned_cols=182 Identities=17% Similarity=0.176 Sum_probs=105.2
Q ss_pred CCCCeeEEEEeccCCCc-cchh--hhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCc
Q 022254 56 SVGTRWAVLLAGSNGFW-NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (300)
Q Consensus 56 ~~~~~wAVLVagS~gw~-NYRH--qadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~i 132 (300)
+.+.+.|+||+=+++-. .-|. ..|+-.+-++|++.||. |..+.|
T Consensus 57 ~~~~r~aLII~N~~f~~l~~R~G~~~Da~~L~~~f~~LGF~-----V~~~~d---------------------------- 103 (302)
T 3e4c_A 57 SSRTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS-----VDVKKN---------------------------- 103 (302)
T ss_dssp TTCCCEEEEEECCSCSSSCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES----------------------------
T ss_pred CCCccEEEEEECcCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEeeC----------------------------
Confidence 34678999998886531 1232 36889999999999995 222332
Q ss_pred CCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCcCHHHHHHHHHHHH-H
Q 022254 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-A 206 (300)
Q Consensus 133 DY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~m~-~ 206 (300)
+|.+.+.+.|.--. .+ .+-...|-+++||.+||..+.|.=-|. ..+.-++|.+.|..-+ .
T Consensus 104 ------lt~~em~~~l~~f~-------~~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~Cp 169 (302)
T 3e4c_A 104 ------LTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCP 169 (302)
T ss_dssp ------CCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCG
T ss_pred ------CCHHHHHHHHHHHH-------hh-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcch
Confidence 57888888887310 01 111234678889999999886533332 3466666666554210 0
Q ss_pred cCCCceEEEEecccccccccccc--------------------------CCCCCcEEEEeecCCCCccccccCCCCCCCC
Q 022254 207 SGNYKSLVFYLEACESGSIFEGL--------------------------LPEGLNIYATTASNAEESSWGTYCPGEIPGP 260 (300)
Q Consensus 207 ~~~Ykklvf~vEAC~SGSmfe~l--------------------------lp~~~nV~~iTASn~~EsSys~yc~~~~~~~ 260 (300)
.-.=|=.+|+++||...-+-..+ .|...++++.=|+-++.-||-.
T Consensus 170 sL~gKPKlffIQACRG~~~~~~~~~ds~~~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~--------- 240 (302)
T 3e4c_A 170 SLKDKPKVIIIQAARGDSPGVVWFKDSVGVSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH--------- 240 (302)
T ss_dssp GGTTSCEEEEEEEECSSSCCCCCCCCC--------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSS---------
T ss_pred hhcCCccEEEEECCCCCCCCcceeccCcccccccccccccccccccccccCCCCCEEEEEeCCCCceeecC---------
Confidence 00334568999999865542111 1222245555555555444432
Q ss_pred CCCCccchhhHHHHHHHhhcccCCCChhhHHHHHHHHHc
Q 022254 261 PPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 261 ~~~~~TclgD~fS~~wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
+..|+ +|--+..+.+..+ -..+.|.+.|..|+.
T Consensus 241 -~~~GS----wFIqaL~~~l~~~-~~~~dl~~il~~V~~ 273 (302)
T 3e4c_A 241 -PTMGS----VFIGRLIEHMQEY-ACSCDVEEIFRKVRF 273 (302)
T ss_dssp -TTCCC----HHHHHHHHHHHHH-TTTSCHHHHHHHHHH
T ss_pred -CCCCc----HHHHHHHHHHHHh-CCCCCHHHHHHHHHH
Confidence 12333 7777777766543 123456666777753
No 10
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=96.38 E-value=0.036 Score=50.92 Aligned_cols=180 Identities=17% Similarity=0.175 Sum_probs=108.0
Q ss_pred CCeeEEEEeccCCCc-----------cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCC
Q 022254 58 GTRWAVLLAGSNGFW-----------NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (300)
Q Consensus 58 ~~~wAVLVagS~gw~-----------NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~ 124 (300)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |..+.|
T Consensus 16 ~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------- 70 (271)
T 3h11_B 16 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHDD-------------------- 70 (271)
T ss_dssp SCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------
T ss_pred CCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEeC--------------------
Confidence 468999998877653 33444 5889999999999995 222332
Q ss_pred CccCCcCcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHH
Q 022254 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (300)
Q Consensus 125 nvY~gv~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m 204 (300)
+|.+.+.++|.--. .+ +-...|-+++++.+||..|.|.--|+..+.-++|.+.|..-
T Consensus 71 --------------lt~~em~~~l~~~~-------~~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~ 127 (271)
T 3h11_B 71 --------------CTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 127 (271)
T ss_dssp --------------CCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred --------------CCHHHHHHHHHHHH-------Hh--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhc
Confidence 57888888887311 01 11345778889999999998877776656666666555320
Q ss_pred H-HcCCCceEEEEeccccccccccc-----------------------cCCCCCcEEEEeecCCCCccccccCCCCCCCC
Q 022254 205 H-ASGNYKSLVFYLEACESGSIFEG-----------------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGP 260 (300)
Q Consensus 205 ~-~~~~Ykklvf~vEAC~SGSmfe~-----------------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~ 260 (300)
. ..-.=|=.+|+++||...-+-.+ .+|...++++.=|+-++.-||-.
T Consensus 128 ~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~--------- 198 (271)
T 3h11_B 128 KCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN--------- 198 (271)
T ss_dssp TCGGGTTSCEEEEEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE---------
T ss_pred cChhhcCCccEEEEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC---------
Confidence 0 00123445899999976543211 12333356665555555555532
Q ss_pred CCCCccchhhHHHHHHHhhcccCCCChhhHHHHHHHHHc
Q 022254 261 PPEYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 261 ~~~~~TclgD~fS~~wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
+..|+ +|--+..+.+..+--+.+.|.+.+..|.+
T Consensus 199 -~~~GS----~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~ 232 (271)
T 3h11_B 199 -PAEGT----WYIQSLCQSLRERCPRGDDILTILTEVNY 232 (271)
T ss_dssp -TTTEE----HHHHHHHHHHHHHGGGTCCHHHHHHHHHH
T ss_pred -CCCCc----HHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 12333 66666666665431113567777777653
No 11
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=96.31 E-value=0.017 Score=54.12 Aligned_cols=178 Identities=15% Similarity=0.194 Sum_probs=107.7
Q ss_pred CCCeeEEEEeccCCCcc----chhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 57 VGTRWAVLLAGSNGFWN----YRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 57 ~~~~wAVLVagS~gw~N----YRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
.....|+||+=+++..+ -|.. .|+-.+-++|++.||. +.+ +.
T Consensus 67 ~~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~---V~~--~~--------------------------- 114 (305)
T 1f1j_A 67 EKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD---VIV--YN--------------------------- 114 (305)
T ss_dssp SEEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEE---EEE--EE---------------------------
T ss_pred CCCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCE---EEE--ec---------------------------
Confidence 35789999988876532 3444 6889999999999994 222 22
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (300)
++|.+.+.+.|.-- . .+ . -...|-+++||.|||..|+|.--|+ .+.-++|...|..-. ..-.
T Consensus 115 -------dlt~~em~~~l~~~-~------~~-~-h~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~CpsL~ 177 (305)
T 1f1j_A 115 -------DCSCAKMQDLLKKA-S------EE-D-HTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDRSKTLL 177 (305)
T ss_dssp -------SCCHHHHHHHHHHH-H------HS-C-GGGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTTCGGGT
T ss_pred -------CcCHHHHHHHHHHH-H------Hh-h-cCCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhccChhhc
Confidence 25777888887731 0 11 1 1235778899999999998766665 366666655443100 0002
Q ss_pred CceEEEEeccccccccccc-----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHH
Q 022254 210 YKSLVFYLEACESGSIFEG-----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLY 272 (300)
Q Consensus 210 Ykklvf~vEAC~SGSmfe~-----------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~f 272 (300)
=|=.+|+++||...-+-.+ .+|...++++.=|+.++.-||-. +..++ +|
T Consensus 178 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~----------~~~GS----~F 243 (305)
T 1f1j_A 178 EKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS----------PGRGS----WF 243 (305)
T ss_dssp TSCEEEEEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE----------TTTEE----HH
T ss_pred CCceEEEeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC----------CCCCC----HH
Confidence 2445889999986543222 12333466666666666666632 12333 67
Q ss_pred HHHHHhhcccCCCChhhHHHHHHHHH
Q 022254 273 SIAWMEDSDIHNLRTETLHQQYELVR 298 (300)
Q Consensus 273 S~~wme~~~~~~l~~etl~~q~~~vk 298 (300)
--+..+.+..+. ..+.|.+.+..|+
T Consensus 244 iqaL~~~l~~~~-~~~dl~~ilt~Vn 268 (305)
T 1f1j_A 244 VQALCSILEEHG-KDLEIMQILTRVN 268 (305)
T ss_dssp HHHHHHHHHHHT-TTSCHHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCCCHHHHHHHHH
Confidence 666666665432 2356777776654
No 12
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=96.14 E-value=0.039 Score=47.90 Aligned_cols=120 Identities=19% Similarity=0.242 Sum_probs=76.0
Q ss_pred CCeeEEEEeccCCCc-cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCcCC
Q 022254 58 GTRWAVLLAGSNGFW-NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDY 134 (300)
Q Consensus 58 ~~~wAVLVagS~gw~-NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~iDY 134 (300)
+...|+||+=+++-. .-|.- .|+-.+-++|++.||. +.+ +.
T Consensus 42 ~~g~ALIInn~~f~~~~~R~G~~~Da~~L~~~f~~LgF~---V~~--~~------------------------------- 85 (178)
T 2h54_A 42 RTRLALIICNEEFDSIPRRTGAEVDITGMTMLLQNLGYS---VDV--KK------------------------------- 85 (178)
T ss_dssp CCCEEEEEECCCCSSSCCCTTHHHHHHHHHHHHHHTTCE---EEE--EE-------------------------------
T ss_pred cCCEEEEEehhhcCCCccCCCCHHHHHHHHHHHHHCCCE---EEE--ec-------------------------------
Confidence 478999998876421 12333 6889999999999995 222 22
Q ss_pred CCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCC-----CCcCHHHHHHHHHHHH-HcC
Q 022254 135 TGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS-----RYIYADELIDVLKKKH-ASG 208 (300)
Q Consensus 135 ~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~-----~~L~a~dL~~~L~~m~-~~~ 208 (300)
++|.+.+.+.|+--. .+ .+-...|-+++||.|||..|.|.-.|. +.+.-++|...+..-+ ..-
T Consensus 86 ---dlt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL 154 (178)
T 2h54_A 86 ---NLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSL 154 (178)
T ss_dssp ---SCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGG
T ss_pred ---CCCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhh
Confidence 257888888887210 01 111235778888999999987665565 2466666666554310 001
Q ss_pred CCceEEEEeccccccc
Q 022254 209 NYKSLVFYLEACESGS 224 (300)
Q Consensus 209 ~Ykklvf~vEAC~SGS 224 (300)
.=|-.+|+++||..+-
T Consensus 155 ~gKPKlffiqACRg~~ 170 (178)
T 2h54_A 155 KDKPKVIIIQACRGDS 170 (178)
T ss_dssp TTSCEEEEEESCSSSB
T ss_pred cCCceEEEEECCCCCC
Confidence 2345689999998854
No 13
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=96.01 E-value=0.06 Score=49.62 Aligned_cols=179 Identities=17% Similarity=0.170 Sum_probs=107.7
Q ss_pred CCCeeEEEEeccCCCc----cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 57 VGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
.....|+||+=.++-. .-|.. .|+-.+-++|++.||. |..+.|
T Consensus 19 ~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~d-------------------------- 67 (278)
T 3od5_A 19 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFND-------------------------- 67 (278)
T ss_dssp SBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------------
T ss_pred CCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEecC--------------------------
Confidence 3578999998887653 34544 5888999999999994 222332
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (300)
+|.+.+.+.|.-- . .+ +-...|-+++++.+||..|.|.--|+. +.-++|.+.|..-. ..-.
T Consensus 68 --------lt~~em~~~l~~~-~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~ 129 (278)
T 3od5_A 68 --------LKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLV 129 (278)
T ss_dssp --------CCHHHHHHHHHHH-H------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHHH-H------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhc
Confidence 5788888888731 1 01 113457888999999999987776765 77666666554210 0012
Q ss_pred CceEEEEecccccccccccc---------------------------CCCCCcEEEEeecCCCCccccccCCCCCCCCCC
Q 022254 210 YKSLVFYLEACESGSIFEGL---------------------------LPEGLNIYATTASNAEESSWGTYCPGEIPGPPP 262 (300)
Q Consensus 210 Ykklvf~vEAC~SGSmfe~l---------------------------lp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~ 262 (300)
=|=.+|+++||...-+-.+. +|...++++.=|+-++.-||-. +
T Consensus 130 gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~ 199 (278)
T 3od5_A 130 GKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE----------T 199 (278)
T ss_dssp TSCEEEEEESCCSSBCBCEECCC---------------------CCCEETTTTEEEEESSCTTBCCEEE----------T
T ss_pred CCCcEEEEecCCCCcccCCeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecC----------C
Confidence 24458999999865432221 1222245555555555444432 1
Q ss_pred CCccchhhHHHHHHHhhcccCCCChhhHHHHHHHHHc
Q 022254 263 EYSTCLGDLYSIAWMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 263 ~~~TclgD~fS~~wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
..|+ +|--+..+.+..+ -..+.|.+.+..|++
T Consensus 200 ~~GS----~fIq~L~~~l~~~-~~~~dl~~ilt~Vn~ 231 (278)
T 3od5_A 200 VNGS----WYIQDLCEMLGKY-GSSLEFTELLTLVNR 231 (278)
T ss_dssp TTEE----HHHHHHHHHHHHH-TTTSCHHHHHHHHHH
T ss_pred CCCc----HHHHHHHHHHHhh-CCCCCHHHHHHHHHH
Confidence 2333 6666666655543 134567777766653
No 14
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=95.99 E-value=0.045 Score=51.47 Aligned_cols=178 Identities=16% Similarity=0.200 Sum_probs=107.1
Q ss_pred CCeeEEEEeccCCCc---cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCc
Q 022254 58 GTRWAVLLAGSNGFW---NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132 (300)
Q Consensus 58 ~~~wAVLVagS~gw~---NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~i 132 (300)
....|+||.=+++-. .-|.. .|+-.+-++|++.||. |.++.|
T Consensus 59 ~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~-----V~~~~d---------------------------- 105 (310)
T 2nn3_C 59 HRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK-----VTVFPN---------------------------- 105 (310)
T ss_dssp BCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES----------------------------
T ss_pred CcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEecC----------------------------
Confidence 478999997776542 23443 6888999999999994 222222
Q ss_pred CCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCCc
Q 022254 133 DYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNYK 211 (300)
Q Consensus 133 DY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Yk 211 (300)
+|.+.+.+.|.--. .+ +-...|-+++||.+||..|+|.-.|+. +.-++|.+.|..-. ..-.=|
T Consensus 106 ------lt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gK 169 (310)
T 2nn3_C 106 ------LKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGK 169 (310)
T ss_dssp ------CCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTS
T ss_pred ------CCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCC
Confidence 57788888877311 11 112357788999999999988776764 66666655553200 001224
Q ss_pred eEEEEeccccccccccc----------------cCCCCCcEEEEeecCCCCccccccCCCCCCCCCCCCccchhhHHHHH
Q 022254 212 SLVFYLEACESGSIFEG----------------LLPEGLNIYATTASNAEESSWGTYCPGEIPGPPPEYSTCLGDLYSIA 275 (300)
Q Consensus 212 klvf~vEAC~SGSmfe~----------------llp~~~nV~~iTASn~~EsSys~yc~~~~~~~~~~~~TclgD~fS~~ 275 (300)
=.+|+++||...-+-.+ ..|...++++.=|+.++.-||-- +.. |=+|--+
T Consensus 170 PKlffiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~----------~~~----GSwFIqa 235 (310)
T 2nn3_C 170 PKLFFIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTR----GSWFMQA 235 (310)
T ss_dssp CEEEEEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS----------SEE----EEHHHHH
T ss_pred ceEEEEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC----------CCC----CCHHHHH
Confidence 45899999986443111 12333356666666666555432 122 3377777
Q ss_pred HHhhcccCCCChhhHHHHHHHHHc
Q 022254 276 WMEDSDIHNLRTETLHQQYELVRS 299 (300)
Q Consensus 276 wme~~~~~~l~~etl~~q~~~vk~ 299 (300)
..+.+..+ -..+.|.+.+..|.+
T Consensus 236 L~~~l~~~-~~~~dl~~ilt~Vn~ 258 (310)
T 2nn3_C 236 LCEELRYA-GTERDILTLLTFVCQ 258 (310)
T ss_dssp HHHHHHTT-TTTSCHHHHHHHHHH
T ss_pred HHHHHHhh-CCCCCHHHHHHHHHH
Confidence 77777653 233567777766643
No 15
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=95.77 E-value=0.12 Score=47.36 Aligned_cols=119 Identities=14% Similarity=0.184 Sum_probs=73.4
Q ss_pred CCeeEEEEeccCCCc----cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcC
Q 022254 58 GTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (300)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~ 131 (300)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |.++.
T Consensus 20 ~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~---------------------------- 66 (277)
T 1nw9_B 20 PCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFM-----VEVKG---------------------------- 66 (277)
T ss_dssp SCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEE-----EEEEE----------------------------
T ss_pred cccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEc----------------------------
Confidence 467999997776543 23544 4888999999999984 22222
Q ss_pred cCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC-------CcccCCCCCCcCHHHHHHHHHHH
Q 022254 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP-------GVLGMPTSRYIYADELIDVLKKK 204 (300)
Q Consensus 132 iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~-------g~l~fpd~~~L~a~dL~~~L~~m 204 (300)
++|.+.+.++|.--. .+ .. ...|-++++|.+||.. |.+.--|+..+.-++|.+.|..-
T Consensus 67 ------dlt~~em~~~l~~~~-------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~ 131 (277)
T 1nw9_B 67 ------DLTAKKMVLALLELA-------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGT 131 (277)
T ss_dssp ------SCCHHHHHHHHHHHH-------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTT
T ss_pred ------CCCHHHHHHHHHHHH-------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhccc
Confidence 257788888887210 01 11 2357788888899987 76654455456666665555320
Q ss_pred H-HcCCCceEEEEeccccccc
Q 022254 205 H-ASGNYKSLVFYLEACESGS 224 (300)
Q Consensus 205 ~-~~~~Ykklvf~vEAC~SGS 224 (300)
+ ..-.=|=.+|+++||...-
T Consensus 132 ~CpsL~gKPKlffiQACRG~~ 152 (277)
T 1nw9_B 132 SCPSLGGKPKLFFIQACGGEQ 152 (277)
T ss_dssp TCGGGTTSCEEEEEEEEC---
T ss_pred CChhHcCCCcEEEEeccCCCc
Confidence 0 0012244589999997543
No 16
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=95.10 E-value=0.28 Score=45.98 Aligned_cols=120 Identities=11% Similarity=0.119 Sum_probs=75.8
Q ss_pred CCeeEEEEeccCCCc--cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCcC
Q 022254 58 GTRWAVLLAGSNGFW--NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKD 133 (300)
Q Consensus 58 ~~~wAVLVagS~gw~--NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~iD 133 (300)
....|+||.=.++-. .-|.. .|+-.+-++|++.||. |.++.
T Consensus 60 ~rg~aLIInN~~F~~~~~~R~Gt~~D~~~L~~~f~~LGF~-----V~~~~------------------------------ 104 (316)
T 2fp3_A 60 NRGVLLMVNIMDYPDQNRRRIGAEKDSKSLIHLFQELNFT-----IFPYG------------------------------ 104 (316)
T ss_dssp CSEEEEEEECCCCSSTTSCCTTHHHHHHHHHHHHHHTTEE-----EEEEC------------------------------
T ss_pred CCcEEEEEeCcccCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEcc------------------------------
Confidence 578999998776541 34544 5888999999999994 22233
Q ss_pred CCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC----CcccCCCCCCcCHHHHHHHHHHHHH-cC
Q 022254 134 YTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP----GVLGMPTSRYIYADELIDVLKKKHA-SG 208 (300)
Q Consensus 134 Y~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~----g~l~fpd~~~L~a~dL~~~L~~m~~-~~ 208 (300)
++|.+.+.++|.--. .+ ..+...|-++++|.+||.. |+|.--|+..+.-++|.+.|..-+- .-
T Consensus 105 ----dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL 172 (316)
T 2fp3_A 105 ----NVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYL 172 (316)
T ss_dssp ----SCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGG
T ss_pred ----CCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhh
Confidence 257788888887211 11 1121457788999999998 8887777765666666665542100 01
Q ss_pred CCceEEEEeccccccc
Q 022254 209 NYKSLVFYLEACESGS 224 (300)
Q Consensus 209 ~Ykklvf~vEAC~SGS 224 (300)
.=|=.+|+++||...-
T Consensus 173 ~gKPKlffiQACRG~~ 188 (316)
T 2fp3_A 173 VNKPKVLMFPFARGDE 188 (316)
T ss_dssp TTSCEEEEESCC----
T ss_pred cCCceEEEEecCCCCc
Confidence 2244588999998643
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=91.94 E-value=0.83 Score=39.13 Aligned_cols=122 Identities=16% Similarity=0.202 Sum_probs=81.3
Q ss_pred CCCeeEEEEeccCCCc----cchhhh--HHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 57 VGTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHqa--dv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
.....|+||.=.++-. .-|.-+ |+-.+-+++++.|+. |..+.|
T Consensus 31 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~d-------------------------- 79 (167)
T 1pyo_A 31 RPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYD-----VHVLCD-------------------------- 79 (167)
T ss_dssp SSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEE-----EEEEES--------------------------
T ss_pred CCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCE-----EEEeeC--------------------------
Confidence 3578999998776532 346554 889999999999994 222222
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (300)
+|.+.+...|+--. .+ .+-...|-+++++.+||..|.|.-.|+..+.-++|...+..-+ ..-.
T Consensus 80 --------lt~~em~~~l~~~~-------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~ 143 (167)
T 1pyo_A 80 --------QTAQEMQEKLQNFA-------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQ 143 (167)
T ss_dssp --------CCHHHHHHHHHHHH-------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGT
T ss_pred --------CCHHHHHHHHHHhh-------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHc
Confidence 57888888887211 00 0112358899999999999988887876677777776664210 0012
Q ss_pred CceEEEEecccccccc
Q 022254 210 YKSLVFYLEACESGSI 225 (300)
Q Consensus 210 Ykklvf~vEAC~SGSm 225 (300)
=|=.+|++.||...-+
T Consensus 144 gKPKlffiQACRG~~~ 159 (167)
T 1pyo_A 144 NKPKMFFIQACRGDET 159 (167)
T ss_dssp TSCEEEEEESCSSSBC
T ss_pred CCCeEEEEECCCCCCC
Confidence 2445899999987554
No 18
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=89.64 E-value=0.54 Score=39.38 Aligned_cols=119 Identities=14% Similarity=0.203 Sum_probs=77.9
Q ss_pred CCeeEEEEeccCCCc----cchhhh--HHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcC
Q 022254 58 GTRWAVLLAGSNGFW----NYRHQA--DICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (300)
Q Consensus 58 ~~~wAVLVagS~gw~----NYRHqa--dv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~ 131 (300)
....|+||.=.++-. .-|.-+ |+-.+-+++++.|+. |..+.|
T Consensus 15 ~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~d--------------------------- 62 (146)
T 2dko_A 15 EMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYE-----VRNKND--------------------------- 62 (146)
T ss_dssp EEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES---------------------------
T ss_pred CceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCE-----EEEeeC---------------------------
Confidence 467999997766542 235555 889999999999996 222222
Q ss_pred cCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 022254 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (300)
Q Consensus 132 iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (300)
.|.+.+...|+--. .+ +-...|-+++++.+||..|.|.-.|+ .+.-++|...+..-+ ..-.=
T Consensus 63 -------lt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~g 125 (146)
T 2dko_A 63 -------LTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTG 125 (146)
T ss_dssp -------CCHHHHHHHHHHHH-------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTT
T ss_pred -------CCHHHHHHHHHHHH-------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcC
Confidence 57788888877211 01 11345889999999999998877777 466666665553200 00123
Q ss_pred ceEEEEecccccccc
Q 022254 211 KSLVFYLEACESGSI 225 (300)
Q Consensus 211 kklvf~vEAC~SGSm 225 (300)
|=.+|++.||...-+
T Consensus 126 KPKlffiQACRG~~~ 140 (146)
T 2dko_A 126 KPKLFIIQACRGTEL 140 (146)
T ss_dssp SCEEEEEESCCSSBC
T ss_pred CCeEEEEECCCCCCC
Confidence 455888999987543
No 19
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=86.40 E-value=1.9 Score=39.51 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=71.9
Q ss_pred CCeeEEEEeccCCCccchhhhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcCcCCCCC
Q 022254 58 GTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGE 137 (300)
Q Consensus 58 ~~~wAVLVagS~gw~NYRHqadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~iDY~g~ 137 (300)
....||||.=.. .|+-.+-+++++.|+. |..+.
T Consensus 42 ~rG~~LIinn~~--------~D~~~L~~~f~~LgF~-----V~~~~---------------------------------- 74 (272)
T 3h11_A 42 PLGICLIIDCIG--------NETELLRDTFTSLGYE-----VQKFL---------------------------------- 74 (272)
T ss_dssp SSEEEEEEESSC--------CCCSHHHHHHHHHTEE-----EEEEE----------------------------------
T ss_pred cceEEEEECCch--------HHHHHHHHHHHHCCCE-----EEEee----------------------------------
Confidence 466899998432 4777888888888884 22233
Q ss_pred CCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCC--CcCHHHHHHHHHHHH-HcCCCceEE
Q 022254 138 DVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSR--YIYADELIDVLKKKH-ASGNYKSLV 214 (300)
Q Consensus 138 ~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~--~L~a~dL~~~L~~m~-~~~~Ykklv 214 (300)
++|.+.+...|.--.. + .+-...|-+++++.+||..|.|.=-|+. .+.-++|.+.|..-+ ..-.=|=.+
T Consensus 75 dlt~~em~~~l~~~~~-------~-~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKl 146 (272)
T 3h11_A 75 HLSMHGISQILGQFAC-------M-PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKM 146 (272)
T ss_dssp SCBHHHHHHHHHHHHT-------C-GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEE
T ss_pred CCCHHHHHHHHHHHHh-------c-cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcE
Confidence 2578888888873110 0 0123468899999999999977666664 366777776664310 001234568
Q ss_pred EEeccccc
Q 022254 215 FYLEACES 222 (300)
Q Consensus 215 f~vEAC~S 222 (300)
|++.||..
T Consensus 147 ffiQACRG 154 (272)
T 3h11_A 147 FFIQNYVV 154 (272)
T ss_dssp EEEEEEEC
T ss_pred EEEECCCC
Confidence 99999985
No 20
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=84.10 E-value=0.38 Score=41.09 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=79.5
Q ss_pred CCeeEEEEeccCCCc-----------cchh--hhHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCC
Q 022254 58 GTRWAVLLAGSNGFW-----------NYRH--QADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGD 124 (300)
Q Consensus 58 ~~~wAVLVagS~gw~-----------NYRH--qadv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~ 124 (300)
...+|+||.=.++-. .-|. ..|+-.+-+++++.|+. |..+.|
T Consensus 22 ~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~-----V~~~~d-------------------- 76 (164)
T 1qtn_A 22 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFE-----IKPHDD-------------------- 76 (164)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEES--------------------
T ss_pred CceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCE-----EEEecC--------------------
Confidence 357999997765532 2333 36888999999999984 222332
Q ss_pred CccCCcCcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHH
Q 022254 125 DVYKGVPKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKK 204 (300)
Q Consensus 125 nvY~gv~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m 204 (300)
+|.+.+...|+--. .+ +-...|-+++++.+||..|.|.-.|+..+.-++|...+..-
T Consensus 77 --------------lt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~ 133 (164)
T 1qtn_A 77 --------------CTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGL 133 (164)
T ss_dssp --------------CCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTT
T ss_pred --------------CCHHHHHHHHHHHH-------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccc
Confidence 57788888887310 01 11346789999999999998888887667777777666431
Q ss_pred HH-cCCCceEEEEecccccccc
Q 022254 205 HA-SGNYKSLVFYLEACESGSI 225 (300)
Q Consensus 205 ~~-~~~Ykklvf~vEAC~SGSm 225 (300)
+- .-.=|=.+|++.||...-.
T Consensus 134 ~CpsL~gKPKlFfiQACRG~~~ 155 (164)
T 1qtn_A 134 KCPSLAGKPKVFFIQACQGDNY 155 (164)
T ss_dssp TCGGGTTSCEEEEEESCSSSBC
T ss_pred cChhhcCCCeEEEEECCCCCCc
Confidence 00 0122445889999987544
No 21
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=81.34 E-value=6.3 Score=34.18 Aligned_cols=122 Identities=18% Similarity=0.222 Sum_probs=77.9
Q ss_pred CCCeeEEEEeccCCCc----cchhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCc
Q 022254 57 VGTRWAVLLAGSNGFW----NYRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGV 130 (300)
Q Consensus 57 ~~~~wAVLVagS~gw~----NYRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv 130 (300)
.....|+||.=.++.. .-|.- .|+-.+-+++++.|+. |..+.
T Consensus 42 ~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~-----V~~~~--------------------------- 89 (179)
T 3p45_A 42 RRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFE-----VKCFN--------------------------- 89 (179)
T ss_dssp SBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCE-----EEEEE---------------------------
T ss_pred CccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-----EEEEe---------------------------
Confidence 3567999998887653 24443 4788999999999994 22222
Q ss_pred CcCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCC
Q 022254 131 PKDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGN 209 (300)
Q Consensus 131 ~iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~ 209 (300)
++|.+.+...|.-- . .+ +-...|-+++.+..||..|.|.--|+. +.-++|.+.|.--+ ..-.
T Consensus 90 -------dlt~~em~~~l~~~-~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~ 152 (179)
T 3p45_A 90 -------DLKAEELLLKIHEV-S------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLV 152 (179)
T ss_dssp -------SCCHHHHHHHHHHH-H------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGT
T ss_pred -------CCCHHHHHHHHHHH-h------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhC
Confidence 25788888888731 1 11 123468899999999999988887876 77777766664211 0112
Q ss_pred CceEEEEecccccccccc
Q 022254 210 YKSLVFYLEACESGSIFE 227 (300)
Q Consensus 210 Ykklvf~vEAC~SGSmfe 227 (300)
=|=.+|++.||...-.=.
T Consensus 153 gKPKlFfIQACRG~~~d~ 170 (179)
T 3p45_A 153 GKPKIFIIQACRGNQHDV 170 (179)
T ss_dssp TSCEEEEEECC-------
T ss_pred CCCcEEEEECCCCCCCCC
Confidence 345688999999765433
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=68.11 E-value=2 Score=37.12 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=75.7
Q ss_pred CCeeEEEEeccCCCcc----chhh--hHHHHHHHHHHhCCCCCCCEEEEecCccccCCCCCCCCeEeeCCCCCCccCCcC
Q 022254 58 GTRWAVLLAGSNGFWN----YRHQ--ADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVP 131 (300)
Q Consensus 58 ~~~wAVLVagS~gw~N----YRHq--adv~~~Yq~Lk~~GipdenIIlm~~DDiA~n~~Np~pG~i~n~~~g~nvY~gv~ 131 (300)
....|+||.=.++-.+ -|.- .|+-.+-+++++.|+. |..+.
T Consensus 43 ~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~-----V~v~~---------------------------- 89 (173)
T 2ql9_A 43 KLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFD-----VIVYN---------------------------- 89 (173)
T ss_dssp EEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEE-----EEEEE----------------------------
T ss_pred CceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCE-----EEEEe----------------------------
Confidence 4568999987765432 3544 5788999999999983 22222
Q ss_pred cCCCCCCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHH-HcCCC
Q 022254 132 KDYTGEDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKH-ASGNY 210 (300)
Q Consensus 132 iDY~g~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~-~~~~Y 210 (300)
++|.+.+...|.-- . .+ +-...|-+++++.+||..|.|.-.|+. +.-++|...+..-. ..-.=
T Consensus 90 ------dlt~~em~~~l~~~-s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~g 153 (173)
T 2ql9_A 90 ------DCSCAKMQDLLKKA-S------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLE 153 (173)
T ss_dssp ------SCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTT
T ss_pred ------CCCHHHHHHHHHHH-H------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcC
Confidence 25778888888731 0 11 112357899999999999988777774 65555555443200 00123
Q ss_pred ceEEEEeccccccc
Q 022254 211 KSLVFYLEACESGS 224 (300)
Q Consensus 211 kklvf~vEAC~SGS 224 (300)
|=.+|++.||...-
T Consensus 154 KPKlFfIQACRG~~ 167 (173)
T 2ql9_A 154 KPKLFFIQACRGTE 167 (173)
T ss_dssp SCEEEEEESCCSSB
T ss_pred CCeEEEEECCCCCC
Confidence 45688899998754
No 23
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=32.81 E-value=36 Score=30.82 Aligned_cols=21 Identities=10% Similarity=0.099 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhC-CCCCCCEEE
Q 022254 79 DICHAYQLLRKG-GLKDENIIV 99 (300)
Q Consensus 79 dv~~~Yq~Lk~~-GipdenIIl 99 (300)
.+-.+-++|.+. |||++.|++
T Consensus 98 EA~~m~~~l~~~~GVp~~~Ill 119 (266)
T 3ca8_A 98 EATILADIAHQFWHIPHEKIWI 119 (266)
T ss_dssp HHHHHHHHHHHTTCCCGGGEEE
T ss_pred HHHHHHHHHHHhcCCCHHHEEe
Confidence 344455778887 999999876
No 24
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}
Probab=31.74 E-value=21 Score=33.83 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=20.0
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
.+-|.|++|.+||++ +|.+|++.++
T Consensus 96 ~npYHN~~HA~dV~q~~~~ll~~~~l 121 (359)
T 2r8q_A 96 RVPYHNFYHVVDVCQTLHTYLYTGKA 121 (359)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHHTSCG
T ss_pred CCccccHHHHHHHHHHHHHHHHcccc
Confidence 468999999999985 6777777664
No 25
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Probab=31.61 E-value=26 Score=33.08 Aligned_cols=25 Identities=20% Similarity=0.541 Sum_probs=20.1
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
.+-|.|++|.+||++ +|.+|+..++
T Consensus 97 ~npYHN~~HA~dV~q~~~~ll~~~~l 122 (347)
T 1tbf_A 97 NVAYHNWRHAFNTAQCMFAALKAGKI 122 (347)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCcCHHHHHHHHHHHHHHHHcccc
Confidence 368999999999984 6777777654
No 26
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=30.16 E-value=20 Score=34.19 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=20.0
Q ss_pred CCCccchhhhHHHH-HHHHHHhCCC
Q 022254 69 NGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 69 ~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
+-|.|++|.+||++ +|.+|.+.|+
T Consensus 79 npYHN~~HA~dV~q~~~~ll~~~~l 103 (365)
T 1taz_A 79 NPYHNQIHAADVTQTVHCFLLRTGM 103 (365)
T ss_dssp CSSSSHHHHHHHHHHHHHHHHHHSG
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhhH
Confidence 57999999999985 6778888774
No 27
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=26.85 E-value=22 Score=34.00 Aligned_cols=25 Identities=28% Similarity=0.377 Sum_probs=18.7
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
.+-|.|+||.+||++ +|.+|+..++
T Consensus 79 ~npYHN~~HA~dV~q~~~~ll~~~~l 104 (377)
T 1f0j_A 79 DVAYHNSLHAADVAQSTHVLLSTPAL 104 (377)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHTCGGG
T ss_pred CCCccCHHHHHHHHHHHHHHHhcchh
Confidence 468999999999995 5556655544
No 28
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...
Probab=25.26 E-value=25 Score=33.19 Aligned_cols=25 Identities=28% Similarity=0.375 Sum_probs=18.9
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
.+-|.|+||.+||++ +|.+|+..|+
T Consensus 92 ~npYHN~~HA~dV~q~~~~ll~~~~l 117 (349)
T 1y2k_A 92 DVAYHNNIHAADVVQSTHVLLSTPAL 117 (349)
T ss_dssp TCSSSSHHHHHHHHHHHHHHHTCGGG
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhH
Confidence 368999999999995 5666665543
No 29
>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A
Probab=24.03 E-value=30 Score=32.67 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=19.6
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGL 92 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gi 92 (300)
.+-|.|.+|.+||++ +|.+|+..|+
T Consensus 78 ~npYHN~~HA~dV~q~~~~ll~~~~l 103 (345)
T 3itu_A 78 DPPYHNWMHAFSVSHFCYLLYKNLEL 103 (345)
T ss_dssp CCSSSSHHHHHHHHHHHHHHHHHHCG
T ss_pred CCCCcCcHHHHHHHHHHHHHHhccch
Confidence 357999999999985 5777777664
No 30
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=24.00 E-value=25 Score=31.31 Aligned_cols=22 Identities=18% Similarity=0.459 Sum_probs=15.9
Q ss_pred CccccCCCCCeEEEEeecCCCC
Q 022254 160 GKVVDSGPNDHIFIFYSDHGGP 181 (300)
Q Consensus 160 ~kvl~S~~~D~VFIY~tgHGg~ 181 (300)
|++|+.=+++.|+||.||||.+
T Consensus 324 g~~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 324 PEIIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHHHTCCTTEEEEEECSSBCC
T ss_pred HHHHHhcCCCCEEEEEccCCCC
Confidence 4455433468899999999974
No 31
>1cvr_A Gingipain R, RGPB; caspases, cysteine proteinase, hydrolase-hydrolase inhibitor; HET: H37; 2.00A {Porphyromonas gingivalis} SCOP: b.1.18.12 c.17.1.2
Probab=23.93 E-value=31 Score=33.56 Aligned_cols=47 Identities=17% Similarity=0.348 Sum_probs=28.9
Q ss_pred EEEEeecCCCCCcccCCCCCCcCHHHHHHHHHHHHHcCCCceEEEEeccccccccc
Q 022254 171 IFIFYSDHGGPGVLGMPTSRYIYADELIDVLKKKHASGNYKSLVFYLEACESGSIF 226 (300)
Q Consensus 171 VFIY~tgHGg~g~l~fpd~~~L~a~dL~~~L~~m~~~~~Ykklvf~vEAC~SGSmf 226 (300)
.+|.|.|||++..+.... +..+|+ +.+. +..|-=+++.=||+.|.+.
T Consensus 204 ~ivnY~GHG~~~~w~~e~---~~~~dv----~~l~--N~~~lPl~it~tC~~g~Fd 250 (435)
T 1cvr_A 204 SLVNYTGHGSETAWGTSH---FGTTHV----KQLT--NSNQLPFIFDVACVNGDFL 250 (435)
T ss_dssp SEEEEESCBCSSBBTTTC---CBTTTG----GGCC--CTTCCCEEEEESSSTTCTT
T ss_pred eEEEEecCCCcccccccc---cChhhH----Hhhc--CCCCCcEEEEeECcCCCCC
Confidence 688899999987554321 333332 2221 2233446778999999975
No 32
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=23.31 E-value=54 Score=25.18 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHcCCCCCCCCCCCccccCCCCCeEEEEeecCCCC
Q 022254 137 EDVTVENFFAVILGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGP 181 (300)
Q Consensus 137 ~~VT~enfl~VL~G~~~~~t~~s~kvl~S~~~D~VFIY~tgHGg~ 181 (300)
.+.|...|+.+|+ |.|+-.+++.||+|....-.|
T Consensus 28 ~~~tv~~~~~~lR-----------krL~l~~~~alFlyVnn~~~P 61 (91)
T 4gdk_A 28 RTRTIQGLIDFIK-----------KFLKLVASEQLFIYVNQSFAP 61 (91)
T ss_dssp TTCBHHHHHHHHH-----------HHTTCCSSSCCEEEETTTBCC
T ss_pred CCCCHHHHHHHHH-----------HHhCCCCCCeEEEEECCccCC
Confidence 4679999999999 335567889999998654433
No 33
>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*
Probab=20.63 E-value=51 Score=34.28 Aligned_cols=26 Identities=19% Similarity=0.539 Sum_probs=20.7
Q ss_pred cCCCccchhhhHHHH-HHHHHHhCCCC
Q 022254 68 SNGFWNYRHQADICH-AYQLLRKGGLK 93 (300)
Q Consensus 68 S~gw~NYRHqadv~~-~Yq~Lk~~Gip 93 (300)
.+-|.|++|.+||++ +|.+|+..++.
T Consensus 612 ~~pyHN~~Ha~dV~q~~~~~l~~~~~~ 638 (878)
T 3bjc_A 612 NVAYHNWRHAFNTAQCMFAALKAGKIQ 638 (878)
T ss_dssp TSSSSSHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCCCccHHHHHHHHHHHHHHHhccchh
Confidence 478999999999984 67777776653
Done!