BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022256
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2V855|GATA_SULSY Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=gatA
PE=3 SV=1
Length = 485
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 66/331 (19%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
M P ++GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GPF R+ D +
Sbjct: 166 MAPASLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPFGRTVEDVAM 225
Query: 61 VLDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVG-----YLEDAE-------MEVVQ 105
+++ I GKDP D +SR P + + + D+ L +G Y ED + V+
Sbjct: 226 IMNVISGKDPKDSTSRSIPVPNYLESLNKDVKGLKIGLPKEFYTEDLNPQIKEIILNAVK 285
Query: 106 VLAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQ---- 159
L ++G+ L YT +++ I+ + LA FD + + Y+ ++
Sbjct: 286 QLEKEGMTAHEISLPYTKYAIETYYIIAPSEASSNLARFDGVRYGYRAKEYKNLEEMYSK 345
Query: 160 -----WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTD 204
+ E++R +I Y++AQ+ R + ++ +F VD I T
Sbjct: 346 TRDEGFGAEVKRRIMIGTYALSSGYYDAYYLKAQKVRTLIYQDYMNAFEKVDVIITPTTP 405
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G N+ +P + +P GFK+ N P +
Sbjct: 406 DVAFKIGEKSNDPIQMYLSDIFTVSANMATVPALSIPCGFKD--NLP---------VGMQ 454
Query: 246 IYAPPKHDHIALALAIAYQSVTDHHKQRPPI 276
I P + L +A +QS+ D+HK+ P +
Sbjct: 455 IIGKPFDEETILQVAYKFQSLNDYHKRFPEV 485
>sp|A7NKM0|GATA_ROSCS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseiflexus
castenholzii (strain DSM 13941 / HLO8) GN=gatA PE=3 SV=1
Length = 490
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 145/336 (43%), Gaps = 79/336 (23%)
Query: 6 IGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAI 65
+G++T GS+ P A CG+T L+PT+G V R G+++ + SLD++GP R+ DC IVL I
Sbjct: 171 LGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIVLRVI 230
Query: 66 QGKDPDDLSSRDFPFAD---PFSVDITKLTVGY------------LEDAEMEVVQVLAEK 110
G DP D + D+P D + DI L +G +E A ++VL E+
Sbjct: 231 AGADPFDATCTDYPAPDYEAALTGDIRGLRIGVPREYFVAGMQPDVEAAVRTAIEVLREQ 290
Query: 111 GIKMV-------PFKL--NYTVDSVQGILN--------FTMDVDMLAHFDEWQRSGKDDV 153
G ++ P+ L Y + + N + + V ++FDE +R+
Sbjct: 291 GAEVCEISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAG- 349
Query: 154 YEAQDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF----------- 193
+ E+RR ++ Y +AQ+ R + R+ +++F
Sbjct: 350 ------FGPEVRRRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQVDVIAAPTT 403
Query: 194 -IVDAFIGNVTD------WEKVCL--GNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITT 244
V IG TD E VC NL GLP +VVP GF + P G +
Sbjct: 404 PTVAFKIGAHTDDPLAMYLEDVCTLPLNLAGLPGLVVPCGF---AEGLPIGLQ------- 453
Query: 245 GIYAPPKHDHIALALAIAYQSVTDHHKQRPPIDNLG 280
+ + L + AYQ VTD H + P + G
Sbjct: 454 -LIGRAFDEESLLRVGDAYQRVTDWHTRMPEVREDG 488
>sp|Q5WVW0|GATA_LEGPL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Lens) GN=gatA PE=3 SV=1
Length = 483
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 76/334 (22%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPFAIGS+T GS+ P A CG++ ++PT+G V R G+++ + SLD+ GPF +SA D +
Sbjct: 162 LVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAM 221
Query: 61 VLDAIQGKDPDDLSSRDFPFADPFSVDIT----KLTVGY------------LEDAEMEVV 104
+L I G D D +S D D +S +I K+ +G ++DA + V
Sbjct: 222 ILHCIAGFDSKDSTSADRVIPD-YSTEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAV 280
Query: 105 QVLAEKGIKMVPFKLN---------YTVDSVQGILNFT-MDVDMLAHFDEWQRSGKDDVY 154
++ G +++ L Y + + N + D H + + + +
Sbjct: 281 KLFENLGAEIIEIDLKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELIT 340
Query: 155 EAQDQ-WPVELRRSRIITAVD----------YMQAQRARGKLIREVKESFI--VDAFIGN 201
++ + + E++R RI+T Y+ AQ+ R +LIR+ + + VD +G
Sbjct: 341 NSRSEGFGNEVKR-RILTGTHVLSSGFFDAYYLHAQKVR-RLIRDELITILNSVDVILGP 398
Query: 202 VTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTI 242
T LG NL GLP I +P GF+N +
Sbjct: 399 TTPTTAFKLGEKIDDPIQNYLADVFTVAANLAGLPAISIPTGFEN-------------KL 445
Query: 243 TTGIYAPPKH--DHIALALAIAYQSVTDHHKQRP 274
G+ KH ++ LA+A YQ T+ H P
Sbjct: 446 PIGLQLMGKHFSENRLLAIAHHYQQHTNWHLANP 479
>sp|A5ICP2|GATA_LEGPC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Corby) GN=gatA PE=3 SV=1
Length = 483
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 145/334 (43%), Gaps = 76/334 (22%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPFAIGS+T GS+ P A CG++ ++PT+G V R G+++ + SLD+ GPF +SA D +
Sbjct: 162 LVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAM 221
Query: 61 VLDAIQGKDPDDLSSRDFPFADPFSVDIT----KLTVGY------------LEDAEMEVV 104
+L I G D D +S D D +S +I K+ +G ++DA + V
Sbjct: 222 ILHCIAGFDSKDSTSVDRVIPD-YSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHDAV 280
Query: 105 QVLAEKGIKMVPFKLN---------YTVDSVQGILNFT-MDVDMLAHFDEWQRSGKDDVY 154
++ G +++ L Y + + N + D H + + + +
Sbjct: 281 KLFENLGAEIIEIDLKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELIT 340
Query: 155 EAQDQ-WPVELRRSRIITAVD----------YMQAQRARGKLIRE--VKESFIVDAFIGN 201
++ + + E++R RI+T Y+ AQ+ R +LIR+ + VD IG
Sbjct: 341 NSRSEGFGNEVKR-RILTGTHVLSTGFFNAYYLHAQKVR-RLIRDELITTLNSVDVIIGP 398
Query: 202 VTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTI 242
T LG NL GLP I +P GF+N +
Sbjct: 399 TTPTTAFKLGEKINDPIQNYLADVFTVAANLAGLPAISIPTGFEN-------------KL 445
Query: 243 TTGIYAPPKHDHIALALAIA--YQSVTDHHKQRP 274
G+ KH + LAIA YQ T+ H P
Sbjct: 446 PIGLQLMGKHFSESRLLAIAHHYQQHTNWHLANP 479
>sp|Q5X4H5|GATA_LEGPA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila (strain Paris) GN=gatA PE=3 SV=1
Length = 483
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 146/334 (43%), Gaps = 76/334 (22%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPFAIGS+T GS+ P A CG++ ++PT+G V R G+++ + SLD+ GPF +SA D +
Sbjct: 162 LVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAM 221
Query: 61 VLDAIQGKDPDDLSSRDFPFADPFSVDIT----KLTVGY------------LEDAEMEVV 104
+L I G D D +S D D +S +I K+ +G ++DA V
Sbjct: 222 ILHCIAGFDSKDSTSVDRVIPD-YSAEIKKPVDKIRIGLPSCFFQPQVEKGIQDAIHNAV 280
Query: 105 QVLAEKG-------IKMVPFKL--NYTVDSVQGILNFT-MDVDMLAHFDEWQRSGKDDVY 154
++ G +K+ PF + Y + + N + D H + + + +
Sbjct: 281 KLFENLGAEIIEIDLKLQPFWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELIT 340
Query: 155 EAQDQ-WPVELRRSRIITAVD----------YMQAQRARGKLIRE--VKESFIVDAFIGN 201
++ + + E++R RI+T Y+ AQ+ R +LIR+ + VD +G
Sbjct: 341 NSRSEGFGNEVKR-RILTGTHVLSSGFFDAYYLHAQKVR-RLIRDELITTLNSVDVILGP 398
Query: 202 VTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTI 242
T LG NL GLP I +P GF+N +
Sbjct: 399 TTPTTAFKLGEKINDPIQNYLADVFTVAANLAGLPAISIPTGFEN-------------KL 445
Query: 243 TTGIYAPPKHDHIALALAIA--YQSVTDHHKQRP 274
G+ KH + LAIA YQ T+ H P
Sbjct: 446 PIGLQLMGKHFSESRLLAIAHHYQQHTNWHLANP 479
>sp|B8G974|GATA_CHLAD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus
aggregans (strain MD-66 / DSM 9485) GN=gatA PE=3 SV=1
Length = 488
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 145/330 (43%), Gaps = 71/330 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VP +G++T GS+ P A CG++ L+PT+G V R G+++ SLD++GP + AD ++
Sbjct: 168 VPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLALI 227
Query: 62 LDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVGY------------LEDAEMEVVQV 106
++ I G DP D +S P + + DI L +G +E A ++V
Sbjct: 228 MNVIAGHDPRDGTSAPLPTPDYTAALTGDIRGLRIGIPREYFVEGMEPGVEAATRTAIEV 287
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQ---RSGKDDVYEAQDQ-- 159
L E+G +V L +T ++ I+ LA FD + R+ + ++E +Q
Sbjct: 288 LREQGATLVEVSLPHTKYALPTYYIIAPAEASANLARFDGVRYGFRAEGETMWEQIEQTR 347
Query: 160 ---WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-------------- 193
+ E+RR ++ Y +AQ+ R + R+ + F
Sbjct: 348 GQGFGPEVRRRIMLGTYALSAGYYDAYYRRAQQVRTLIKRDFDQVFNEVDLLATPTSPTV 407
Query: 194 -------IVDAFIGNVTDWEKVCLG--NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITT 244
I D ++D VC NL G+P +VVP GF S+ P G +
Sbjct: 408 AFPIGQKINDPLAMYLSD---VCTLPINLAGVPALVVPCGF---SDGLPVGLQ------- 454
Query: 245 GIYAPPKHDHIALALAIAYQSVTDHHKQRP 274
+ P + L + AYQ VTD H +RP
Sbjct: 455 -LIGRPFDEATLLRVGDAYQRVTDWHTRRP 483
>sp|Q5ZUQ7|GATA_LEGPH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=gatA PE=3 SV=1
Length = 483
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 76/334 (22%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPFAIGS+T GS+ P A CG++ ++PT+G V R G+++ + SLD+ GPF +SA D +
Sbjct: 162 LVPFAIGSDTGGSIRQPAAFCGISGIKPTYGLVSRYGMVAFASSLDQAGPFAKSAEDLAM 221
Query: 61 VLDAIQGKDPDDLSSRDFPFADPFSVDIT----KLTVGY------------LEDAEMEVV 104
+L + G D D +S D D +S +I K+ +G ++DA + V
Sbjct: 222 ILHCMAGFDSKDSTSVDRVIPD-YSAEIKNPVDKIRIGLPSCFFQPQVEKGIQDAIHDAV 280
Query: 105 QVLAEKGIKMVPFKLN---------YTVDSVQGILNFT-MDVDMLAHFDEWQRSGKDDVY 154
++ G +++ L Y + + N + D H + + + +
Sbjct: 281 KLFENLGAEIIEIDLKLQPLWVPCYYVIACAEASSNLSRYDGIRFGHRSKSASTLIELIT 340
Query: 155 EAQDQ-WPVELRRSRIITAVD----------YMQAQRARGKLIRE--VKESFIVDAFIGN 201
++ + + E++R RI+T Y+ AQ+ R +LIR+ + VD +G
Sbjct: 341 NSRSEGFGNEVKR-RILTGTHVLSSGFFDAYYLHAQKVR-RLIRDELITTLNSVDVILGP 398
Query: 202 VTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTI 242
T LG NL GLP + +P GF+N +
Sbjct: 399 TTPTTAFKLGEKIDDPIQNYLADVFTVAANLAGLPAVSIPTGFEN-------------KL 445
Query: 243 TTGIYAPPKH--DHIALALAIAYQSVTDHHKQRP 274
G+ KH ++ LA+A YQ T+ H P
Sbjct: 446 PIGLQLMSKHFSENRLLAIAHHYQQHTNWHLANP 479
>sp|C4Z3J4|GATA_EUBE2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
eligens (strain ATCC 27750 / VPI C15-48) GN=gatA PE=3
SV=1
Length = 481
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 55/275 (20%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
A+GS+T GS+ P + CGV L+PT+GTV R G+++ SLD++GP C+ DC +++A
Sbjct: 170 ALGSDTGGSIRQPASYCGVVGLKPTYGTVSRYGLIAYGSSLDQIGPLCKDVTDCATIMEA 229
Query: 65 IQGKDPDDLSS---RDFPFADPFSVDITKLTVGY------------LEDAEMEVVQVLAE 109
I GKD D +S D+ F + D+ + +G +++A + +VL
Sbjct: 230 IAGKDDKDSTSIGRDDYSFTNALVDDVKGMKIGIPRDYFGEGLDPEVKEAVLNAAKVLES 289
Query: 110 KGIKMVPFKLN---------YTVDSVQGILNFTMDVDMLAHFDEWQRSGKDDVYEA--QD 158
KG + F L+ YT+ + + N + + + G ++Y+ +
Sbjct: 290 KGAIVEEFDLSLVEYAIPTYYTIAAAEASSNLERFDGVKYGYRTKEYEGLHNMYKKTRSE 349
Query: 159 QWPVELRRSRIITA---------VDYMQAQRARGKLIREVKESFI-VDAFIG-------- 200
+ E++R ++ + Y++A R + + + E+F D +G
Sbjct: 350 GFGPEVKRRIMLGSFVLSSGYYDAYYLKALRVKALIKKAFDEAFAKYDVILGPVAPTTAP 409
Query: 201 ----NVTDWEKVCLG-------NLVGLPVIVVPAG 224
+++D K+ LG NL GLP + VP G
Sbjct: 410 KLGSSLSDPIKMYLGDIYTISVNLAGLPGLSVPCG 444
>sp|A5UXF9|GATA_ROSS1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Roseiflexus sp.
(strain RS-1) GN=gatA PE=3 SV=1
Length = 487
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 79/330 (23%)
Query: 6 IGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAI 65
+G++T GS+ P A CG+T L+PT+G V R G+++ + SLD++GP R+ DC I+L I
Sbjct: 171 LGTDTGGSIRQPAALCGITGLKPTYGRVSRYGLVAFASSLDQIGPMARTVRDCAIILRVI 230
Query: 66 QGKDPDDLSSRDFPFAD---PFSVDITKLTVGY------------LEDAEMEVVQVLAEK 110
G DP D + D P D + DI L +G +E A + VL ++
Sbjct: 231 AGADPFDATCTDHPVPDYEAALTGDIRGLRIGVPREYFVAGMQPEVESAVRVAIDVLRDQ 290
Query: 111 GIKM-------VPFKL--NYTVDSVQGILN--------FTMDVDMLAHFDEWQRSGKDDV 153
G ++ P+ L Y + + N + + V ++FDE +R+
Sbjct: 291 GAEVREISLPHTPYALPVYYLIAPAEASANLARFDGVRYGLRVPGESYFDELERTRGAG- 349
Query: 154 YEAQDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVD------- 196
+ E+RR ++ Y +AQ+ R + R+ +++F VD
Sbjct: 350 ------FGPEVRRRIMLGTYALSAGYYDAYYKRAQQVRTLIRRDYQQAFEQVDVIAAPTT 403
Query: 197 ---AF-IGNVTD------WEKVCL--GNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITT 244
AF IG +D E VC NL GLP +VVP GF + P I
Sbjct: 404 PTVAFPIGAHSDDPLAMYLEDVCTLPLNLAGLPGLVVPCGFA--AGLP---------IGL 452
Query: 245 GIYAPPKHDHIALALAIAYQSVTDHHKQRP 274
+ + L + AYQ VTD H + P
Sbjct: 453 QLIGRAFDEETLLRIGDAYQRVTDWHTRMP 482
>sp|B1I3K2|GATA_DESAP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulforudis
audaxviator (strain MP104C) GN=gatA PE=3 SV=1
Length = 492
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 66/326 (20%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
A+GS+T GS+ P + CGV ++PT+G V R G+++ + SLD++GP R DC +V++A
Sbjct: 170 ALGSDTGGSIRQPASFCGVVGMKPTYGLVSRYGLVAFASSLDQIGPLTRDVTDCALVMNA 229
Query: 65 IQGKDPDDLSS--RDFPFADPFSVDITK-LTVGY--------LEDA----EMEVVQVLAE 109
I G D D +S ++ P F VD K + +G L+D ME V V E
Sbjct: 230 ICGHDHRDSTSVPKEVPDFTSFLVDDVKGMRIGLPREYFPAELDDGVRRIVMEAVSVFEE 289
Query: 110 KGIKMVPFKLNYTVDS--VQGILNFTMDVDMLAHFDEWQRSGK----DDVYEA-----QD 158
+G + L +T + V ++ LA +D + + +DV +
Sbjct: 290 RGAYVEETSLPHTEYALPVYYLIAPAEASSNLARYDGVRYGYRAPECEDVLDMFRVSRSR 349
Query: 159 QWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTDWEKV 208
+ E++R ++ Y++A + R + R+ +E+F D +
Sbjct: 350 GFGAEVKRRIMLGTYALSAGYYDAYYLKALKVRTLIRRDFEEAFEKFDVLLSPTAPETAF 409
Query: 209 CLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAP 249
+G NL GLP + VPAGF ++ P +
Sbjct: 410 IIGAKTEDPIRMYLSDIFTLAVNLAGLPGMSVPAGF--VAGLP---------VGIQFIGK 458
Query: 250 PKHDHIALALAIAYQSVTDHHKQRPP 275
P + L + A+Q TDHH+QRPP
Sbjct: 459 PFAEGTLLRMGYAFQQSTDHHRQRPP 484
>sp|Q5L3B3|GATA_GEOKA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus
kaustophilus (strain HTA426) GN=gatA PE=3 SV=1
Length = 485
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 70/330 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPFA+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D V
Sbjct: 167 VPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYV 226
Query: 62 LDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVG----YLEDAEMEVVQ--------V 106
L AI G DP D +S + P + + + DI L + YL + E V+ V
Sbjct: 227 LQAIAGVDPMDSTSANIPVPNYVEALTGDIKGLKIAVPKEYLGEGVDEGVRQSVLAALAV 286
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQRSGKD-------DVYEA- 156
L + G L ++ ++ +L + LA FD + + D+Y+
Sbjct: 287 LEKLGAAWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKLT 346
Query: 157 -QDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTDW 205
+ + E++R ++ Y +AQ+ R + R+ + F D IG T
Sbjct: 347 RSEGFGAEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKRDFENVFERYDVIIGPTTPT 406
Query: 206 EKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGI 246
+G NL G+P I VP GF + + G+
Sbjct: 407 PAFKIGEKTSDPLTMYMNDILTIPVNLAGVPAISVPCGFVD-------------GLPVGL 453
Query: 247 YAPPKH--DHIALALAIAYQSVTDHHKQRP 274
KH + +A A++ TD+HKQ+P
Sbjct: 454 QIIGKHFDESTVYRVAHAFEQATDYHKQKP 483
>sp|Q65MP8|GATA_BACLD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=gatA PE=3
SV=1
Length = 485
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 144/333 (43%), Gaps = 72/333 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPF++GS+T GS+ P + CGV L+PT+G V R G+++ + SLD++GP RS D +
Sbjct: 167 VPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRSVEDNAYL 226
Query: 62 LDAIQGKDPDDLSSRDFPFADPFSV---DITKLTV---------GYLEDAE---MEVVQV 106
L AI G D D +S + D S DI L + G E+A+ +E ++V
Sbjct: 227 LQAISGVDKMDSTSANVDVPDYLSALTGDIKGLKIAVPKEYLGEGVSEEAKQSVLEALKV 286
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFD----EWQRSGKDDVYEAQDQ- 159
L G L ++ ++ +L+ + LA FD ++ D++ + Q
Sbjct: 287 LESLGATWEEVSLPHSKYALATYYLLSSSEASANLARFDGIRYGYRTDNADNLIDLYKQT 346
Query: 160 ----WPVELRRSRIITA----------VDYMQAQRARGKLIREVKESFI-VDAFIGNVTD 204
+ E++R RI+ Y +AQ+ R + ++ ++ F D IG T
Sbjct: 347 RSEGFGNEVKR-RIMLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFANYDVIIGPTTP 405
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G NL G+P I VP GF N + G
Sbjct: 406 TPAFKIGEKTSDPLTMYANDILTIPVNLAGVPGISVPCGFAN-------------GLPLG 452
Query: 246 IYAPPKH--DHIALALAIAYQSVTDHHKQRPPI 276
+ KH + +A A++ TDHHK +P +
Sbjct: 453 LQIIGKHFDESTVYRVAHAFEQATDHHKAKPEL 485
>sp|Q93LE2|GATA_GEOSE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus
stearothermophilus GN=gatA PE=3 SV=1
Length = 485
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 141/331 (42%), Gaps = 72/331 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPFA+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D +
Sbjct: 167 VPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYL 226
Query: 62 LDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVG----YLEDAEMEVVQVLAEKGIKM 114
L AI G DP D +S + P + + + DI L + YL + E V+ + +
Sbjct: 227 LQAIAGVDPMDSTSANVPVPNYVEALTGDIKGLKIAVPNEYLGEGVDEGVRQSVLAALAV 286
Query: 115 VPFKLNYTVDSVQ-----------GILNFTMDVDMLAHFDEWQRSGKD-------DVYEA 156
+ KL T + V +L + LA FD + + D+Y+
Sbjct: 287 LE-KLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKL 345
Query: 157 --QDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTD 204
+ + E++R ++ Y +AQ+ R + R+ + F D IG T
Sbjct: 346 TRSEGFGAEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKRDFENVFERYDVIIGPTTP 405
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G NL G+P I VP GF + + G
Sbjct: 406 TPAFKIGEKTSDPLTMYANDILTIPVNLAGVPAISVPCGFVD-------------GLPVG 452
Query: 246 IYAPPKH--DHIALALAIAYQSVTDHHKQRP 274
+ KH + +A A++ TD+HKQ+P
Sbjct: 453 LQIIGKHFDESTVYRVAHAFEQATDYHKQKP 483
>sp|B9LER8|GATA_CHLSY Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus
aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)
GN=gatA PE=3 SV=1
Length = 487
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 65/327 (19%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VP +G++T GS+ P A CG++ L+PT+G V R G+++ SLD++GP + AD ++
Sbjct: 168 VPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVL 227
Query: 62 LDAIQGKDPDDLSSR--DFP-FADPFSVDITKLTVGY------------LEDAEMEVVQV 106
L+ I G DP D +S D P + + DI L +G +E A ++V
Sbjct: 228 LNVIAGHDPRDGTSAPIDTPDYTTALTGDIRGLRIGIPREYFVEGMEPGVESATRTAIEV 287
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQ---RSGKDDVYEAQDQ-- 159
L + G +V L +T ++ I+ LA FD + R+ + ++E +Q
Sbjct: 288 LRDLGAILVDVSLPHTRYALPTYYIIAPAEASANLARFDGVRYGFRAEGETMWEQIEQTR 347
Query: 160 ---WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI-VD---------- 196
+ E+RR ++ Y +AQ+ R + R+ ++ F VD
Sbjct: 348 GQGFGPEVRRRIMLGTYALSAGYYDAYYRRAQQVRTLIKRDFEQVFTQVDLLAAPTSPTV 407
Query: 197 AF-IGNVTD------WEKVCLG--NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIY 247
AF IG + VC NL G+P +VVP GF S P G + +
Sbjct: 408 AFPIGQKINDPLAMYLSDVCTLPINLAGVPALVVPCGF---SEGLPVGLQ--------LI 456
Query: 248 APPKHDHIALALAIAYQSVTDHHKQRP 274
P + L + AYQ +T+ H QRP
Sbjct: 457 GRPFDEATLLRVGDAYQRLTEWHTQRP 483
>sp|A9WCD8|GATA_CHLAA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=gatA PE=3 SV=1
Length = 487
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 65/327 (19%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VP +G++T GS+ P A CG++ L+PT+G V R G+++ SLD++GP + AD ++
Sbjct: 168 VPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVL 227
Query: 62 LDAIQGKDPDDLSSR--DFP-FADPFSVDITKLTVGY------------LEDAEMEVVQV 106
L+ I G DP D +S D P + + DI L +G +E A ++V
Sbjct: 228 LNVIAGHDPRDGTSAPIDTPDYTTALTGDIRGLRIGIPREYFVEGMEPGVESATRTAIEV 287
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQ---RSGKDDVYEAQDQ-- 159
L + G +V L +T ++ I+ LA FD + R+ + ++E +Q
Sbjct: 288 LRDLGAILVDVSLPHTRYALPTYYIIAPAEASANLARFDGVRYGFRAEGETMWEQIEQTR 347
Query: 160 ---WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI-VD---------- 196
+ E+RR ++ Y +AQ+ R + R+ ++ F VD
Sbjct: 348 GQGFGPEVRRRIMLGTYALSAGYYDAYYRRAQQVRTLIKRDFEQVFTQVDLLAAPTSPTV 407
Query: 197 AF-IGNVTD------WEKVCLG--NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIY 247
AF IG + VC NL G+P +VVP GF S P G + +
Sbjct: 408 AFPIGQKINDPLAMYLSDVCTLPINLAGVPALVVPCGF---SEGLPVGLQ--------LI 456
Query: 248 APPKHDHIALALAIAYQSVTDHHKQRP 274
P + L + AYQ +T+ H QRP
Sbjct: 457 GRPFDEATLLRVGDAYQRLTEWHTQRP 483
>sp|A5EY31|GATA_DICNV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dichelobacter
nodosus (strain VCS1703A) GN=gatA PE=3 SV=1
Length = 487
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 69/330 (20%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
++P+A GS+T GS+ P A CG+T ++PT+GT R G+++ + SLD+ G ++A DC +
Sbjct: 167 LIPYATGSDTGGSVRQPAAYCGITGIKPTYGTCSRWGMIAYASSLDQAGVLAKTAQDCAL 226
Query: 61 VLDAIQGKDPDDLSSRD---FPFADPFSVDITKLTVG----YLEDAEMEVVQVLAEKG-- 111
+L+ + G DP D +S F + D+ +T+G YL + ++ + L +
Sbjct: 227 ILNEMAGHDPKDSTSNPKALTQFDHELNRDLDGITIGLPSNYLAGLDAKIAEKLQQTAAL 286
Query: 112 -------IKMVPFKLN-------YTVDSVQGILNFTMDVDMLAHFDEWQRSGKD--DVYE 155
IK + Y + S + N D + H+ + KD D+YE
Sbjct: 287 YEKLGATIKEITLSATDVAIASYYLISSAEASSNLER-FDGV-HYGYRCANPKDLSDLYE 344
Query: 156 --AQDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI-VDAFIGNVT 203
+ + E++R +I Y QA+R R ++ ++F D +G T
Sbjct: 345 RSRSEGFGAEVKRRIMIGTYALSAGYYDAYYEQARRGRRAILNSFLQAFKECDVILGPTT 404
Query: 204 DWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITT 244
LG NL GLP + PAGF + P G + +
Sbjct: 405 PTTAYPLGSKVDDPVAMFLGDLYTVSANLAGLPALSHPAGFI---DGLPVGCQ----LIG 457
Query: 245 GIYAPPKHDHIALALAIAYQSVTDHHKQRP 274
++ P+ L LA +Q TD H+Q P
Sbjct: 458 AHFSEPQ----LLNLAHRFQQETDFHQQIP 483
>sp|Q3AD36|GATA_CARHZ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=gatA PE=3
SV=1
Length = 485
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 140/330 (42%), Gaps = 72/330 (21%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
A+GS+T GS+ P A CG+ L+PT+G V R G+++ + SLD++GPF R+ D ++L+
Sbjct: 170 ALGSDTGGSIRQPAAFCGIVGLKPTYGAVSRYGLVAFASSLDQIGPFARTVEDAALLLNV 229
Query: 65 IQGKDPDDLSSRDFPFADPFSV---DITKLTVGY------------LEDAEMEVVQVLAE 109
I G DP D +S D + D S DI L +G ++ A + ++VL
Sbjct: 230 IAGHDPKDSTSADIEYPDYLSFLNQDIKGLKIGLPKEYFIDGIDAGVKKAIDDAIKVLES 289
Query: 110 KGIKMVPFKLNYTVDS--VQGILNFTMDVDMLAHFDEWQRSGKDDVYEAQD--------- 158
G L +T S V ++ LA +D + +D +EA+D
Sbjct: 290 LGAVFEEVSLPHTKYSLPVYYLIAPAEASSNLARYDGVRYGYRD--FEAEDVVEMFSRTR 347
Query: 159 --QWPVELRRSRIITA----------VDYMQAQRARGKLIREVKESFI-VDA-------- 197
+ E++R RI+ Y++A + R + + +F VD
Sbjct: 348 AEGFGAEVKR-RIMLGTYALSAGYYDAYYLKALKVRTLIKEDFDRAFTKVDLLLTPTTPT 406
Query: 198 ----FIGNVTDWEKVCLG-------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGI 246
F +D + L NL GLP I VPAGF ++ +
Sbjct: 407 PAFKFGEKTSDPVSMYLSDIFTMAVNLAGLPGISVPAGFDG-----------HLPVSFQL 455
Query: 247 YAPPKHDHIALALAIAYQSVTDHHKQRPPI 276
P + L +A A++ T+ HK RP +
Sbjct: 456 IGKPFDEGTLLKVAHAFEQNTEFHKARPKL 485
>sp|Q1J0C2|GATA_DEIGD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus
geothermalis (strain DSM 11300) GN=gatA PE=3 SV=1
Length = 483
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 136/329 (41%), Gaps = 81/329 (24%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+ P A+GS+T GS+ P A G+ L+PT+G V R G+++ + SLD++GPF RSAAD +
Sbjct: 162 LTPVALGSDTGGSVRQPAAFTGIYGLKPTYGRVSRYGLVAYASSLDQIGPFARSAADLAL 221
Query: 61 VLDAIQGKDPDDLSSRDFP--FADPFSVDITKLTVGYLEDAEMEVVQVLAEKGIKMVPFK 118
+++ + G DP D +S D P F D+ L VG + +A E V
Sbjct: 222 LMNVLAGHDPRDATSLDAPPAFRPGTPDDLQGLRVGVIREA--------LEGNTPGVEAA 273
Query: 119 LNYTVDSVQGILNFTMDVDM---------------------LAHFDEW---QRSGKDDVY 154
LN T+D+++G +V + LA +D +R D
Sbjct: 274 LNATLDALRGAGATVREVSVPSVQHAIAAYYLIATPEASSNLARYDGMVYGERVSAPDAV 333
Query: 155 EA-----QDQWPVELRRSRIITAV-----DYMQAQRARGKLIREVKESFIVDAFIGNV-- 202
+ + + E++R RI+ Y A ++ +R + AF GNV
Sbjct: 334 SSMTLTREQGFGREVKR-RIMLGTYALSSGYYDAYYSKAMKVRRLIAQDFARAF-GNVDV 391
Query: 203 -------------------------TDWEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSR 237
D + V + NL GLP + VPAGF+ +
Sbjct: 392 LVTPTSPFPAFRRGEKTQDPLAMYAADVDTVAI-NLAGLPALSVPAGFERVDGV------ 444
Query: 238 RRTTITTGIYAPPKHDHIALALAIAYQSV 266
R + + APP D +ALA + +
Sbjct: 445 -RLPVGVQLIAPPLQDERLVALAGGLEGI 472
>sp|A5GTM0|GATA_SYNR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain RCC307) GN=gatA PE=3 SV=1
Length = 485
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 132/325 (40%), Gaps = 65/325 (20%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
A+GS+T GS+ P + CGV L+PT+G V R G+++ + SLD++GPF R+ AD VL
Sbjct: 165 ALGSDTGGSIRQPASFCGVVGLKPTYGRVSRWGLVAFASSLDQIGPFSRTVADSAAVLQV 224
Query: 65 IQGKDPDDLSSRDFP---FADPFSVDITKLTVGYLEDAEMEVVQVLAEKGIKMVPFKL-- 119
I G DP D +S D P ++ + I L +G L++A +E +Q E ++ +L
Sbjct: 225 IAGHDPRDSTSLDVPVPDYSAALNRPIQGLKIGILQEAFVEGLQPEVEASVRAAAEQLAS 284
Query: 120 ------NYTVDSVQ-GILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQWPV---------- 162
+ + Q GI + + A + + G Y A D +
Sbjct: 285 LGCELVDVSCPRFQAGIATYYVIAPSEASANLARYDGVKYGYRAADAESLSAMTAKSRAE 344
Query: 163 ----ELRRSRIITA-------VD--YMQAQRARGKLIREVKESF-IVDAFIGNVTDWEKV 208
E++R +I VD Y +AQ+ R + +E +F VD +
Sbjct: 345 GFGDEVQRRILIGTYALSAGYVDAYYKKAQQVRTLIRQEFDRAFEQVDLLLTPTAPTTAF 404
Query: 209 CLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAP 249
G NL GLP I VP GF P I + AP
Sbjct: 405 TPGEHSNDPLAMYLADLLTIPANLAGLPAISVPCGFDGQGLP----------IGLQLMAP 454
Query: 250 PKHDHIALALAIAYQSVTDHHKQRP 274
+ L +A Y+ D RP
Sbjct: 455 VLQEERLLQVAHHYEQAADVMANRP 479
>sp|Q050D1|GATA_LEPBL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain L550)
GN=gatA PE=3 SV=1
Length = 485
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 59/279 (21%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
MVP A+GS+T GS+ P + CG+ L+PT+GTV R G+++ + SLD++GPF + C
Sbjct: 167 MVPLALGSDTGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSKELQGCID 226
Query: 61 VLDAIQGKDPDDLSSRDFP-FADPFSVDITKLTVGYLE----------DAEMEVVQVLAE 109
+ I GKD D +S + P F+ P++ D L +G ++ A +V+ L E
Sbjct: 227 LYSVISGKDERDSTSLNHPGFSAPWTPDFKGLKIGTIKMTSEIQPEVVKAYEKVLNQLKE 286
Query: 110 KGIKMVPF---KLNYTVDSVQGILNFTMDVDMLAHFDEWQ-RSGKDDVYEAQD------- 158
KG +V K ++ + + I+ L+ FD + S KD + +D
Sbjct: 287 KGATLVELDFSKFDFAI-PIYYIIATAECSSNLSRFDGIRFGSRKDKTGKLEDLFVDSRT 345
Query: 159 -QWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI--VD---------- 196
+ E++R ++ Y AQ+AR LIR+ +SF VD
Sbjct: 346 TGFGSEVKRRILLGTFSLSAGYYDAYYGTAQKAR-VLIRKEYDSFFSKVDFILQPTSPTT 404
Query: 197 AF-IGNVTD----------WEKVCLGNLVGLPVIVVPAG 224
AF +G T W NL G+P I VP G
Sbjct: 405 AFKVGEKTKDPIQMYKADIWTTSV--NLAGIPAISVPMG 441
>sp|Q04SA5|GATA_LEPBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
GN=gatA PE=3 SV=1
Length = 485
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 59/279 (21%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
MVP A+GS+T GS+ P + CG+ L+PT+GTV R G+++ + SLD++GPF + C
Sbjct: 167 MVPLALGSDTGGSVRQPASLCGLYGLKPTYGTVSRYGLVAYASSLDQIGPFSKELQGCID 226
Query: 61 VLDAIQGKDPDDLSSRDFP-FADPFSVDITKLTVGYLE----------DAEMEVVQVLAE 109
+ I GKD D +S + P F+ P++ D L +G ++ A +V+ L E
Sbjct: 227 LYSVISGKDERDSTSLNHPGFSAPWTPDFKGLKIGTIKMTSEIQPEVVKAYEKVLNQLKE 286
Query: 110 KGIKMVPF---KLNYTVDSVQGILNFTMDVDMLAHFDEWQ-RSGKDDVYEAQD------- 158
KG +V K ++ + + I+ L+ FD + S KD + +D
Sbjct: 287 KGATLVELDFSKFDFAI-PIYYIIATAECSSNLSRFDGIRFGSRKDKTGKLEDLFVDSRT 345
Query: 159 -QWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI--VD---------- 196
+ E++R ++ Y AQ+AR LIR+ +SF VD
Sbjct: 346 TGFGSEVKRRILLGTFSLSAGYYDAYYGTAQKAR-VLIRKEYDSFFSKVDFILQPTSPTT 404
Query: 197 AF-IGNVTD----------WEKVCLGNLVGLPVIVVPAG 224
AF +G T W NL G+P I VP G
Sbjct: 405 AFKVGEKTKDPIQMYKADIWTTSV--NLAGIPAISVPMG 441
>sp|C5D4K6|GATA_GEOSW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus sp.
(strain WCH70) GN=gatA PE=3 SV=1
Length = 486
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 72/333 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPFA+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D +
Sbjct: 168 VPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYL 227
Query: 62 LDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVG----YLEDAEMEVVQVLAEKGIKM 114
L I G DP D +S + + + + DI L + YL + E V+ +K+
Sbjct: 228 LQVIAGLDPMDSTSANVEVPNYVEALTGDIKGLKIAVPKEYLGEGVAEEVRQSVLDALKV 287
Query: 115 VPFKLNYTVDSVQ-----------GILNFTMDVDMLAHFDEWQRSGKD-------DVYEA 156
+ KL T + V +L + LA FD + + D+Y+
Sbjct: 288 LE-KLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKQ 346
Query: 157 --QDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTD 204
+ + E++R ++ Y +AQ+ R + ++ ++ F D IG T
Sbjct: 347 TRSEGFGNEVKRRIMLGTFALSAGYYDAYYKKAQQVRTLIKQDFEKVFEKYDVIIGPTTP 406
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G NL G+P I VP GF N + G
Sbjct: 407 TPAFKIGEKTHDPLTMYANDILTIPVNLAGVPGISVPCGFVN-------------GLPVG 453
Query: 246 IYAPPKH--DHIALALAIAYQSVTDHHKQRPPI 276
+ KH + +A A++ TD+HKQ+P +
Sbjct: 454 LQIIGKHFDESTIYRVAHAFEQATDYHKQKPAL 486
>sp|Q5WJ20|GATA_BACSK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus clausii
(strain KSM-K16) GN=gatA PE=3 SV=1
Length = 483
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 145/333 (43%), Gaps = 72/333 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPFA+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D +
Sbjct: 165 VPFALGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYL 224
Query: 62 LDAIQGKDPDDLSSRDF---PFADPFSVDITKLTVG----YLED--------AEMEVVQV 106
L+AI G P D +S D P+ + + +I L +G Y+ D A + + V
Sbjct: 225 LEAIAGHCPADSTSADLPVPPYRESLTGEIKGLRIGVPSEYIGDGVSEEMRKAVFDALNV 284
Query: 107 LAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFD----EWQRSGKD---DVYEA- 156
L ++G L Y+ ++ ++ + LA FD ++ D D+Y+
Sbjct: 285 LEKEGAVWEEVSLPYSKYALAAYYVIASSEASANLARFDGVRYGYRTDNADNLLDMYKNT 344
Query: 157 -QDQWPVELRRSRIITA----------VDYMQAQRARGKLIREVKESFI-VDAFIGNVTD 204
+ + E++R RI+ Y +AQ+ R + ++ + F D IG T
Sbjct: 345 RAEGFGDEVKR-RIMLGTFALSSGYYDAYYKKAQQVRTLIKKDFDDVFTNYDVIIGPTTP 403
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G NL G+P + +P GFK+ + G
Sbjct: 404 TPAFKIGAKTDDPLTMYANDILTIPVNLAGVPALSLPCGFKD-------------GLPLG 450
Query: 246 IYAPPKHDHIALALAIA--YQSVTDHHKQRPPI 276
+ KH A +A Y+ T+ K++P +
Sbjct: 451 LQIIGKHFDEATIYRVADVYEKATNFSKEKPSL 483
>sp|A8FAS0|GATA_BACP2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus pumilus
(strain SAFR-032) GN=gatA PE=3 SV=1
Length = 485
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 140/340 (41%), Gaps = 86/340 (25%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPF++GS+T GS+ P + CGV L+PT+G V R G+++ + SLD++GP R+ D V
Sbjct: 167 VPFSLGSDTGGSIRQPASFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPITRNVEDNAYV 226
Query: 62 LDAIQGKDPDDLSSR--DFP-FADPFSVDITKLTV---------GYLEDAEMEVVQVLA- 108
L AI G D D +S D P F + DI + + G E+A+ V+Q L
Sbjct: 227 LQAIAGVDQMDATSANVDVPDFLSSLTGDIKGMKIAVPKEYLGEGVGEEAKESVLQALKV 286
Query: 109 ---------EKGIKMVPFKLN--YTVDSVQGILNFTMDVDMLAHFDEWQRSGKDDVYEA- 156
E + + L Y + S + N LA FD + + D E
Sbjct: 287 LEGLGATWEEVSLPHSKYALATYYLLSSSEASAN-------LARFDGIRYGYRTDNAENL 339
Query: 157 --------QDQWPVELRRSRIITA----------VDYMQAQRARGKLIREVKESF-IVDA 197
+ + E++R RI+ Y +AQ+ R + ++ ++ F D
Sbjct: 340 IDLYKNTRSEGFGNEVKR-RIMLGTFALSSGYYDAYYKKAQKVRTLIKKDFEDVFEKYDV 398
Query: 198 FIGNVTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRR 238
+G T +G NL G+P I VP GF N
Sbjct: 399 IVGPTTPTPAFKIGEKTSDPLTMYANDILTIPVNLAGVPGISVPCGFAN----------- 447
Query: 239 RTTITTGIYAPPKH--DHIALALAIAYQSVTDHHKQRPPI 276
+ G+ KH + +A A++ TDHHK +P +
Sbjct: 448 --GLPLGLQIIGKHFDEGTVYRVAHAFEQATDHHKAKPEL 485
>sp|C0QRF9|GATA_PERMH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Persephonella
marina (strain DSM 14350 / EX-H1) GN=gatA PE=3 SV=1
Length = 485
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 55/282 (19%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+ P A+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++G F R+ D I
Sbjct: 166 LAPAALGSDTGGSIRQPAAFCGVIGLKPTYGRVSRYGLVAFASSLDQIGTFTRTVEDTAI 225
Query: 61 VLDAIQGKDPDDLSS--RDFP-FADPFSVDITKLTVG------------YLEDAEMEVVQ 105
+L+ I GKDP D +S R+ P F DI + +G +++ ME +
Sbjct: 226 LLNIISGKDPKDSTSADREVPDFTKFLDKDIKGIKIGIPEEFFVEGLDSQIKELVMESAK 285
Query: 106 VLAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFD----EWQRSGKDDVYEAQDQ 159
+L ++G ++V + T +++ I+ + LA +D ++ S D+ E +
Sbjct: 286 LLEKEGAELVSISMPTTKYAIEAYYIIAPSEASSNLARYDGVRYGFRASDYSDLEEMYSK 345
Query: 160 -----WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVD-------- 196
+ E++R ++ Y++AQ+ R + ++ ++F VD
Sbjct: 346 TRDEGFGAEVKRRIMLGTYSLSSGYYDAYYLKAQKVRTLIYQDFMKAFESVDIILTPTTP 405
Query: 197 --AF-IG-NVTDWEKVCLG-------NLVGLPVIVVPAGFKN 227
AF IG V D ++ L N+ G+P + +P GFK+
Sbjct: 406 DVAFRIGEKVDDPLQMYLSDIFTVSVNMAGVPGMSIPCGFKD 447
>sp|C4ZHB9|GATA_EUBR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1
Length = 503
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPFA+GS+T GS+ P + CGVT ++PT+GTV R G+++ SLD++GP + DC I+
Sbjct: 167 VPFALGSDTGGSIRQPSSFCGVTGIKPTYGTVSRYGLIAYGSSLDQIGPIAKDVTDCAII 226
Query: 62 LDAIQGKDPDDLSS---RDFPFADPFSVDITKLTVG----YLED 98
L+AI D D +S D F + D+ + +G YL D
Sbjct: 227 LEAIASYDTKDSTSVNRDDLKFTEALVDDVKGMKIGIPKDYLGD 270
>sp|Q9Z9W9|GATA_BACHD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=gatA PE=3 SV=1
Length = 485
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 140/334 (41%), Gaps = 74/334 (22%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPF +GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D +
Sbjct: 167 VPFTLGSDTGGSIRQPAAYCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRNVEDNAYL 226
Query: 62 LDAIQGKDPDDLSSRDFPFADPFSV---DITKLTVG----YLEDAEMEVVQVLAEKGIKM 114
L AI G DP D +S + D S DI L + YL + E V+ +K+
Sbjct: 227 LQAISGHDPMDSTSANLDVPDYLSALTGDIKGLKIAVPKEYLGEGVKEEVKQSVLDALKV 286
Query: 115 VPFKLNYTVDSVQ-----------GILNFTMDVDMLAHFD----EWQRSGKDDVYEAQDQ 159
+ L T + V +L + LA FD ++ D++ + Q
Sbjct: 287 LE-GLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGFRSDNADNLLDMYKQ 345
Query: 160 -----WPVELRRSRIITA----------VDYMQAQRARGKLIREVKESF-IVDAFIGNVT 203
+ E++R RI+ Y +AQ+ R + ++ ++ F D IG T
Sbjct: 346 TRAEGFGDEVKR-RIMLGTFALSSGYYDAYYKKAQQVRTLIKQDFEKVFEQYDVIIGPTT 404
Query: 204 DWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITT 244
+G NL G+P I VP GF N +
Sbjct: 405 PTPAFKIGEKTDDPLTMYANDILTIPVNLAGVPAISVPCGFDN-------------GLPL 451
Query: 245 GIYAPPKH--DHIALALAIAYQSVTDHHKQRPPI 276
G+ KH + +A A++ TD+H +RP +
Sbjct: 452 GLQIIGKHFDEGSVYRVAHAFEQATDYHTKRPTL 485
>sp|Q9RF07|GATA_STAAU Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus GN=gatA PE=3 SV=1
Length = 485
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADANDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q6GFF7|GATA_STAAR Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain MRSA252) GN=gatA PE=3 SV=1
Length = 485
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADANDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q2JL51|GATA_SYNJB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=gatA PE=3 SV=1
Length = 510
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 133/325 (40%), Gaps = 66/325 (20%)
Query: 6 IGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAI 65
+GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GPF R+ D ++L I
Sbjct: 167 LGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAFASSLDQVGPFGRTVEDVALLLQGI 226
Query: 66 QGKDPDDLSSR--DFP-FADPFSVDITKLTVGYLED------------AEMEVVQVLAEK 110
G DP D +S D P ++ DI +G + D A +Q L E
Sbjct: 227 AGHDPMDSTSLKVDIPDYSQALIPDIKGFKIGVIRDLLGEGCGEETRAAVQAAIQHLQEL 286
Query: 111 GIKMVPF---KLNYTVDSVQGILNFTMDVDMLAHFDEWQ---RSGKDDVY------EAQD 158
G +++ Y + + I + LA +D + R D + A
Sbjct: 287 GAEILEIDCPSFRYGLATYYIIAPSEASAN-LARYDGVKYGLREPADSLLSMYGKTRAHG 345
Query: 159 QWPVELRRSRIITA--------VDYMQAQRARGKLIREVKESF-IVDAFIGNVTDWEKVC 209
P RR I T Y++AQ+ R + ++ ++F VD + T
Sbjct: 346 FGPEVKRRIMIGTYALSSGYYDAYYLKAQKVRTLIKQDFLKAFEKVDVLVSPTTPTPAFK 405
Query: 210 LG------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPK 251
LG NL GLP + +P GF + I I
Sbjct: 406 LGEREDPLSMYLCDLMTIPVNLAGLPGLSLPCGFAD-----------GLPIGLQIVGNAL 454
Query: 252 HDHIALALAIAYQSVTDHHKQRPPI 276
+ L +A AY+ TD HK+RPP+
Sbjct: 455 QESKVLRVAYAYEQSTDWHKRRPPL 479
>sp|B7KLL5|GATA_CYAP7 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cyanothece sp.
(strain PCC 7424) GN=gatA PE=3 SV=1
Length = 483
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 68/328 (20%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
A+GS+T GS+ P + CGV L+PT+G V R G+++ + SLD++GPF R+ D I+L A
Sbjct: 166 ALGSDTGGSIRQPASYCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDAAILLGA 225
Query: 65 IQGKDPDDLSSRDFPFADP---FSVDITKLTVGYLEDAEME----VVQVLAEKGIKMVPF 117
I G DP D +S + D ++KL +G +++ E VV +G++ +
Sbjct: 226 IAGYDPKDSTSLNVEIPDYTQFLKPKLSKLKIGIIKETFGEGLDPVVADTVNQGVEQLK- 284
Query: 118 KLNYTVDSVQG-----------ILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQWP----- 161
KL V + I+ + LA +D + + + +
Sbjct: 285 KLGAKVKEISCPRFRYGLPAYYIIAPSEASANLARYDAVKYGIRKEADTLMSMYTTTRAS 344
Query: 162 ---VELRRSRIITA----------VDYMQAQRARGKLIREVKESF-IVDAFIGNVTDWEK 207
E++R RI+ Y++AQ+ R + ++ +++F VD +
Sbjct: 345 GFGAEVKR-RIMLGTYALSAGYYDAYYLKAQKVRTLIKQDFEQAFEEVDVLVCPTAPTTA 403
Query: 208 VCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYA 248
G NL GLP + +P GF + P I + +
Sbjct: 404 FKAGEKTDDPLSMYLSDLMTIPVNLGGLPGMSIPCGFDRLGLP----------IGMQLIS 453
Query: 249 PPKHDHIALALAIAYQSVTDHHKQRPPI 276
+ + +A AY+ TD HK++PP+
Sbjct: 454 NVLREDLLFQVAYAYEQATDWHKRKPPL 481
>sp|Q2RGY4|GATA_MOOTA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Moorella
thermoacetica (strain ATCC 39073) GN=gatA PE=3 SV=1
Length = 487
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 4 FAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLD 63
FA+GS+T GS+ P + CGV ++PT+G V R G+++ + SLD++GP R DC +VL+
Sbjct: 169 FALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPITRDVTDCALVLE 228
Query: 64 AIQGKDPDDLSSRDFPFAD 82
AI G DP D +S D P D
Sbjct: 229 AIAGHDPLDSTSADLPVPD 247
>sp|A4IJZ2|GATA_GEOTN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=gatA PE=3 SV=1
Length = 485
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 72/331 (21%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VPF++GS+T GS+ P A CGV L+PT+G V R G+++ + SLD++GP R+ D +
Sbjct: 167 VPFSLGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLVAFASSLDQIGPITRTVEDNAYL 226
Query: 62 LDAIQGKDPDDLSSR--DFP-FADPFSVDITKLTVG----YLEDAEMEVVQVLAEKGIKM 114
L I G DP D +S D P + + + DI L + YL + E V+ + +
Sbjct: 227 LQVIAGVDPMDSTSANIDVPNYVEALTGDIKGLKIAVPKEYLGEGVAEEVRQSVLAALSV 286
Query: 115 VPFKLNYTVDSVQ-----------GILNFTMDVDMLAHFDEWQRSGKD-------DVYEA 156
+ KL T + V +L + LA FD + + D+Y+
Sbjct: 287 LE-KLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRTDNAKNLIDMYKQ 345
Query: 157 --QDQWPVELRRSRIITAVD---------YMQAQRARGKLIREVKESF-IVDAFIGNVTD 204
+ + E++R ++ Y +AQ+ R + R+ + F D IG T
Sbjct: 346 TRSEGFGSEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKRDFENVFEQYDVIIGPTTP 405
Query: 205 WEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTG 245
+G NL G+P I VP GF + + G
Sbjct: 406 TPAFKIGEKTSDPLTMYMNDILTIPVNLAGVPAISVPCGFVD-------------GLPVG 452
Query: 246 IYAPPKH--DHIALALAIAYQSVTDHHKQRP 274
+ KH + +A A++ TD+HKQ+P
Sbjct: 453 LQIIGKHFDESTVYRVAHAFEQATDYHKQKP 483
>sp|Q2YU51|GATA_STAAB Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSASVDDVDFTSEIGKDIKGLKV 261
>sp|Q8NVT3|GATA_STAAW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain MW2) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q6G833|GATA_STAAS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain MSSA476) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|A5IU67|GATA_STAA9 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain JH9) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|A6U305|GATA_STAA2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain JH1) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|B9E826|GATA_MACCJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Macrococcus
caseolyticus (strain JCSC5402) GN=gatA PE=3 SV=1
Length = 481
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 123/284 (43%), Gaps = 59/284 (20%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P + CGV ++PT+G V R G+++ + SLD++GP R+ D
Sbjct: 162 LVPFSLGSDTGGSIRQPASYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPITRNVKDNAT 221
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTVG----YLEDAEMEVVQVLAEKGIK 113
VL+ I G DP D +S + F DI L V YL + E V+ + IK
Sbjct: 222 VLEVISGLDPHDSTSAPVDNVDFTSQIDKDIKGLRVAVPKEYLGEGVSEEVKASVQAAIK 281
Query: 114 MVPFKLNYTVDSVQ-----------GILNFTMDVDMLAHFD----EWQRSGKDDVYEA-- 156
+ K+ TV+ V IL+ + LA FD +Q G ++ E
Sbjct: 282 ALE-KMGATVEEVSLPNSKYGVATYYILSSSEASANLARFDGIRYGYQAEGAQNLEELYK 340
Query: 157 ---QDQWPVELRRSRIITA----------VDYMQAQRARGKLIREVKESF-IVDAFIGNV 202
Q+ + E++R RI+ Y +AQ+ R + ++ + F D +G
Sbjct: 341 KTRQEGFGDEVKR-RIMLGTYALSSGYYDAYYKKAQKVRTLIKQDFERVFENYDIIVGPT 399
Query: 203 TDWEKVCLG-------------------NLVGLPVIVVPAGFKN 227
+G NL GLP + +P G N
Sbjct: 400 APTTAFDIGAQINDPLTMYANDILTIPINLAGLPSMSIPCGESN 443
>sp|P63496|AMI4_MYCTU Putative amidase AmiD OS=Mycobacterium tuberculosis GN=amiD PE=3
SV=1
Length = 475
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 32/299 (10%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
+IGS+T GS+ +P + CGVT ++PT+G V R GV+ ++ S D +GP RSA D ++L
Sbjct: 182 SIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSV 241
Query: 65 IQGKDPDDLSSRDFPFADPFSVDIT-----------KLTVGYLEDAE---MEVVQVLAEK 110
I G D D S P D ++ D+ T + ED +VV+ L +
Sbjct: 242 IAGSDIHDPSCSAEPVPD-YAADLALTRIPRVGVDWSQTTSFDEDTTAMLADVVKTLDDI 300
Query: 111 GIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQWPVELRRSRII 170
G ++ KL V +AH D + + D Y + ++ +
Sbjct: 301 GWPVIDVKLPALAPMVAAFGKMRAVETAIAHADTYP--ARADEYGPIMRAMIDA--GHRL 356
Query: 171 TAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTDWEKVCLGNLVGL-------PVIVVP 222
AV+Y R + R ++ F VD + L + GL + +P
Sbjct: 357 AAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLETMRGLGQDPELTARLAMP 416
Query: 223 AGFKNISNPP----PSGSRRRTT-ITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPPI 276
N+S P P+G+ R T + +H+ + A+Q VT +H++RPP+
Sbjct: 417 TAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEHLLVRAGHAFQQVTGYHRRRPPV 475
>sp|P63497|AMI4_MYCBO Putative amidase AmiD OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=amiD PE=3 SV=1
Length = 475
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 32/299 (10%)
Query: 5 AIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDA 64
+IGS+T GS+ +P + CGVT ++PT+G V R GV+ ++ S D +GP RSA D ++L
Sbjct: 182 SIGSDTGGSIRFPTSMCGVTGIKPTWGRVSRHGVVELAASYDHVGPITRSAHDAAVLLSV 241
Query: 65 IQGKDPDDLSSRDFPFADPFSVDIT-----------KLTVGYLEDAE---MEVVQVLAEK 110
I G D D S P D ++ D+ T + ED +VV+ L +
Sbjct: 242 IAGSDIHDPSCSAEPVPD-YAADLALTRIPRVGVDWSQTTSFDEDTTAMLADVVKTLDDI 300
Query: 111 GIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQWPVELRRSRII 170
G ++ KL V +AH D + + D Y + ++ +
Sbjct: 301 GWPVIDVKLPALAPMVAAFGKMRAVETAIAHADTYP--ARADEYGPIMRAMIDA--GHRL 356
Query: 171 TAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTDWEKVCLGNLVGL-------PVIVVP 222
AV+Y R + R ++ F VD + L + GL + +P
Sbjct: 357 AAVEYQTLTERRLEFTRSLRRVFHDVDILLMPSAGIASPTLETMRGLGQDPELTARLAMP 416
Query: 223 AGFKNISNPP----PSGSRRRTT-ITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPPI 276
N+S P P+G+ R T + +H+ + A+Q VT +H++RPP+
Sbjct: 417 TAPFNVSGNPAICLPAGTTARGTPLGVQFIGREFDEHLLVRAGHAFQQVTGYHRRRPPV 475
>sp|Q1QVB5|GATA_CHRSD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=gatA PE=3 SV=1
Length = 486
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 67/324 (20%)
Query: 6 IGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAI 65
+G++T GS+ P A CG+T L+PT+G V R G+++ + SLD+ GP R+AADC ++L+ I
Sbjct: 168 LGTDTGGSIRQPAAFCGITGLKPTYGRVSRYGMVAYASSLDQGGPMARTAADCALLLETI 227
Query: 66 QGKDPDDLSS--RDFP-FADPFSVDITKLTVGY------------LEDAEMEVVQVLAEK 110
G D D +S R P ++ + L +G +E A E ++V
Sbjct: 228 AGHDVRDSTSVARVVPDYSAELDTSLAGLKIGLPKEYFGDGLDPEVETAVREAIKVYESL 287
Query: 111 GIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQRSGK-------DDVYE--AQDQ 159
G K+ L +T ++ ++ L+ +D + + +D+Y+ +
Sbjct: 288 GAKVCEVSLPHTHLAIPAYYVIAPAEASSNLSRYDGVRFGHRCEDPTDLEDLYKRTRAEG 347
Query: 160 WPVELRRSRIITAVD----------YMQAQRARGKLIREVKESF-IVDAFIGNVTDWEKV 208
+ E++R RI+ Y++AQ+ R + ++ ++F VD +G
Sbjct: 348 FGEEVKR-RILIGTHTLSEGFFDAYYLKAQQVRRLIRQDFLDAFDEVDVLMGPTAPTPAF 406
Query: 209 CLG------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPP 250
LG NL G+P I VPAGF N P + + AP
Sbjct: 407 DLGAQKDPVSMYLQDIYTIAVNLAGIPGISVPAGFAG--NRP---------VGLQVLAPH 455
Query: 251 KHDHIALALAIAYQSVTDHHKQRP 274
+ L +A +Q TD H +RP
Sbjct: 456 FAEAQLLGVAHQFQQATDWHLKRP 479
>sp|A8Z2R4|GATA_STAAT Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain USA300 / TCH1516) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|A6QIC8|GATA_STAAE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain Newman) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q5HEM2|GATA_STAAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain COL) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q2FWY9|GATA_STAA8 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain NCTC 8325) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|Q2FFJ5|GATA_STAA3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus
aureus (strain USA300) GN=gatA PE=3 SV=1
Length = 485
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VPF++GS+T GS+ P A CGV ++PT+G V R G+++ + SLD++GP R+ D I
Sbjct: 166 LVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAI 225
Query: 61 VLDAIQGKDPDDLSSR---DFPFADPFSVDITKLTV 93
VL+AI G D +D +S D F DI L V
Sbjct: 226 VLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKV 261
>sp|B2A5W7|GATA_NATTJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=gatA PE=3 SV=1
Length = 491
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 53/279 (18%)
Query: 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIV 61
VP A+GS+T GS+ P + CGV ++PT+G V R G+++ + SLD++GP ++ D +
Sbjct: 167 VPLALGSDTGGSIRQPASFCGVVGMKPTYGRVSRYGLVAFASSLDQIGPLSKNVEDTALA 226
Query: 62 LDAIQGKDPDDLSSRDFP---FADPFSVDITKLTVG----YLEDAEMEVVQVLAEKGIKM 114
LD I G D D +S D D + DI +LT+G Y E + +V ++ +
Sbjct: 227 LDIISGHDHMDSTSVDLEVPNHTDFLNQDIDELTIGIPKEYYELVDNDVKSLVESSLQSI 286
Query: 115 VPFKLNY---TVDSVQGILNFTMDV------DMLAHFD---EWQRSGKDDVYEAQDQ--- 159
P NY ++ + + L+ + LA FD QR DD+ +Q
Sbjct: 287 EPEAGNYRQVSLPTTEHALSAYYLIAPAEASSNLARFDGVRYGQRFATDDLKTMYNQTRK 346
Query: 160 --WPVELRRSRIITAVD---------YMQAQRARGKLIREVKESFI-VDAFIG------- 200
+ E+++ ++ Y++A + R + +E ++ F D I
Sbjct: 347 EGFGNEVKQRVMLGTYALSAGYYDALYLKALKVRSLIKQEFEQVFSECDVLIAPTTPTVP 406
Query: 201 -----NVTD-----WEKVCLG--NLVGLPVIVVPAGFKN 227
NV D +C NL GLP I +P GF N
Sbjct: 407 FREGENVDDPLTMYKNDICTAPVNLAGLPSISIPCGFSN 445
>sp|B0VS13|GATA_ACIBS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter
baumannii (strain SDF) GN=gatA PE=3 SV=1
Length = 492
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 17/137 (12%)
Query: 3 PFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVL 62
PFA G++T GS+ P + CG+T L+PT+G V R G+++ + SLD+ GP RSA DC ++
Sbjct: 168 PFATGTDTGGSIRQPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLM 227
Query: 63 DAIQGKDPDDLSS----RDFPFADPFSVDITKLTVG----YLE----DAEM-----EVVQ 105
+ I G D D +S D A+ + + L +G Y DAE+ E ++
Sbjct: 228 NVIAGHDAKDSTSVKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDAEVKARVEESLK 287
Query: 106 VLAEKGIKMVPFKLNYT 122
L E G K+V LN T
Sbjct: 288 KLEEMGAKLVEIDLNMT 304
>sp|C1DQ37|GATA_AZOVD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=gatA PE=3 SV=1
Length = 483
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 137/334 (41%), Gaps = 76/334 (22%)
Query: 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTI 60
+VP A GS+T GS+ P A +T L+PT+G V R G+++ + SLD+ GP RSA DC +
Sbjct: 163 LVPAATGSDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARSAEDCAL 222
Query: 61 VLDAIQGKDPDDLSSRDFPFADPFSV---DITKLTVGY------------LEDAEMEVVQ 105
+L A+ G DP D + D P D + + L +G L DA M V+
Sbjct: 223 LLSAMAGFDPKDSTCVDQPVDDYLAALHRPLAGLRIGLPREYFGAGLDPRLSDAVMACVE 282
Query: 106 VLAEKGIKMVPFKL---------NYTVDSVQGILNFTMDVDMLAHFDEWQRSGKDDVYEA 156
L + G + L Y + + N + + + +D+Y+
Sbjct: 283 ELKKLGATVKEIGLPSMQHAIPAYYVIAPAEASSNLSRFDGVRFGYRCENPQSLEDLYKR 342
Query: 157 Q--DQWPVELRRSRIITA----------VDYMQAQRARGKLIREVKESFI-----VDAFI 199
+ + E++R RI+ Y++AQ+ R R ++ FI VD +
Sbjct: 343 SRGEGFGAEVKR-RIMVGTYALSAGYYDAYYLKAQKIR----RLIRSDFIGAFQEVDLIL 397
Query: 200 GNVTDWEKVCLG-------------------NLVGLPVIVVPAGFKNISNPPPSGSRRRT 240
G T LG NL G+P + +PAGF + P
Sbjct: 398 GPTTPNPAWKLGEKGDDPVAAYLEDIYTITANLAGIPGLSMPAGF--VDGLP-------- 447
Query: 241 TITTGIYAPPKHDHIALALAIAYQSVTDHHKQRP 274
+ + AP + L +A YQ TD H++ P
Sbjct: 448 -VGVQLLAPYFQESRLLNVAHQYQQATDWHQRAP 480
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,951,236
Number of Sequences: 539616
Number of extensions: 4963698
Number of successful extensions: 13424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12158
Number of HSP's gapped (non-prelim): 1163
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)