Query 022256
Match_columns 300
No_of_seqs 157 out of 1462
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 09:14:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022256.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022256hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 3.4E-52 7.4E-57 384.4 25.0 261 1-274 169-474 (475)
2 PRK06169 putative amidase; Pro 100.0 7.4E-51 1.6E-55 378.4 26.1 259 1-275 168-464 (466)
3 PRK08186 allophanate hydrolase 100.0 2.1E-50 4.6E-55 382.5 28.0 256 1-270 163-451 (600)
4 TIGR02713 allophanate_hyd allo 100.0 3.4E-50 7.3E-55 377.6 28.1 256 1-270 126-414 (561)
5 PRK07486 amidase; Provisional 100.0 3.5E-50 7.6E-55 375.5 26.8 263 1-275 173-479 (484)
6 PRK07235 amidase; Provisional 100.0 3.1E-50 6.6E-55 375.6 24.9 252 1-267 183-501 (502)
7 PRK06102 hypothetical protein; 100.0 1E-49 2.2E-54 369.2 25.3 246 1-268 168-450 (452)
8 PRK07056 amidase; Provisional 100.0 1.1E-49 2.4E-54 369.1 25.4 244 1-268 172-452 (454)
9 PRK07487 amidase; Provisional 100.0 1.9E-49 4.1E-54 369.0 26.7 251 1-269 168-459 (469)
10 PRK06170 amidase; Provisional 100.0 2.5E-49 5.3E-54 370.6 26.9 256 1-268 171-483 (490)
11 PRK07042 amidase; Provisional 100.0 4.4E-49 9.5E-54 366.3 26.5 258 1-277 167-462 (464)
12 PRK08137 amidase; Provisional 100.0 8.2E-49 1.8E-53 367.4 27.3 261 1-276 174-491 (497)
13 PRK06061 amidase; Provisional 100.0 9E-49 2E-53 365.4 27.3 258 1-275 176-476 (483)
14 TIGR00132 gatA glutamyl-tRNA(G 100.0 3.9E-49 8.5E-54 366.7 24.4 253 1-266 151-460 (460)
15 PRK05962 amidase; Validated 100.0 1.5E-48 3.2E-53 358.7 25.8 243 1-268 142-422 (424)
16 PRK07488 indole acetimide hydr 100.0 2.4E-48 5.2E-53 362.1 27.4 246 1-269 169-467 (472)
17 PRK00012 gatA aspartyl/glutamy 100.0 1.4E-48 3E-53 363.0 23.5 251 1-264 151-459 (459)
18 PRK07139 amidase; Provisional 100.0 3.8E-48 8.3E-53 356.9 25.8 252 2-268 132-434 (439)
19 PRK08310 amidase; Provisional 100.0 2.6E-48 5.6E-53 354.0 24.3 239 1-267 123-394 (395)
20 TIGR02715 amido_AtzE amidohydr 100.0 3.2E-48 6.8E-53 359.5 24.0 248 1-267 161-448 (452)
21 PRK09201 amidase; Provisional 100.0 6.1E-48 1.3E-52 358.5 25.2 249 1-268 168-456 (465)
22 PRK06529 amidase; Provisional 100.0 3.4E-47 7.4E-52 355.2 27.2 254 1-266 159-477 (482)
23 PRK12470 amidase; Provisional 100.0 2.8E-47 6.1E-52 353.5 26.2 255 1-276 167-461 (462)
24 PRK06828 amidase; Provisional 100.0 6.2E-47 1.3E-51 351.9 25.8 259 1-276 184-490 (491)
25 PLN02722 indole-3-acetamide am 100.0 7.1E-47 1.5E-51 346.0 23.1 237 1-265 124-420 (422)
26 PRK06707 amidase; Provisional 100.0 4.9E-46 1.1E-50 347.7 26.5 258 1-275 239-535 (536)
27 PRK07869 amidase; Provisional 100.0 9.4E-46 2E-50 344.6 25.9 254 1-270 169-465 (468)
28 PF01425 Amidase: Amidase; In 100.0 2.3E-47 5E-52 354.1 14.3 244 1-257 143-441 (441)
29 PRK11910 amidase; Provisional 100.0 2E-45 4.4E-50 343.4 27.0 250 1-269 330-608 (615)
30 PRK06565 amidase; Validated 100.0 3.1E-41 6.7E-46 313.2 24.8 260 1-269 174-556 (566)
31 KOG1212 Amidases [Translation, 100.0 3.4E-40 7.3E-45 300.9 20.2 268 2-271 216-556 (560)
32 KOG1211 Amidases [Translation, 100.0 2.8E-38 6E-43 285.8 14.7 255 1-265 178-493 (506)
33 COG1797 CobB Cobyrinic acid a, 70.8 16 0.00034 33.9 6.7 32 88-119 243-279 (451)
34 PF03698 UPF0180: Uncharacteri 66.3 9.6 0.00021 26.4 3.4 28 91-119 2-29 (80)
35 PRK03094 hypothetical protein; 58.3 17 0.00036 25.2 3.5 27 92-119 3-29 (80)
36 KOG4106 Uncharacterized conser 40.1 18 0.0004 26.5 1.5 18 278-295 43-60 (125)
37 COG1049 AcnB Aconitase B [Ener 39.9 13 0.00027 35.9 0.8 37 20-59 383-420 (852)
38 PF03612 EIIBC-GUT_N: Sorbitol 37.5 15 0.00033 29.6 0.8 39 8-59 68-106 (183)
39 COG3603 Uncharacterized conser 37.4 32 0.00069 25.7 2.3 17 99-115 111-127 (128)
40 TIGR00825 EIIBC-GUT PTS system 36.2 14 0.0003 32.1 0.4 38 8-58 68-106 (331)
41 PRK09273 hypothetical protein; 27.7 1E+02 0.0022 25.7 4.1 29 91-119 1-38 (211)
42 COG0461 PyrE Orotate phosphori 27.3 1.1E+02 0.0025 25.2 4.3 30 89-118 111-146 (201)
43 PF13669 Glyoxalase_4: Glyoxal 22.9 1E+02 0.0022 22.1 3.1 24 93-116 72-95 (109)
44 COG3732 SrlE Phosphotransferas 21.9 38 0.00082 29.1 0.6 38 8-58 69-106 (328)
45 COG1654 BirA Biotin operon rep 21.3 65 0.0014 22.3 1.5 26 92-117 28-53 (79)
46 COG1875 NYN ribonuclease and A 20.3 1.1E+02 0.0023 28.2 3.0 25 244-268 248-272 (436)
No 1
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-52 Score=384.37 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=198.3
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCC-CCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDL-SSRDFP 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~-~~~~~~ 79 (300)
+|+||+|||||||||+|||||||||||||+||||+.|+++.++++|++|||||||+|+++++++|+|.|+.|. .....+
T Consensus 169 ~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D~a~l~~v~~g~D~~d~~~~~~~~ 248 (475)
T COG0154 169 LVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRDAALLLDVIAGPDPRDSPLPPPPP 248 (475)
T ss_pred CcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHHHHHHHHHHcCCCCcccccccccC
Confidence 6899999999999999999999999999999999999999999999999999999999999999999998884 222222
Q ss_pred CCC-CCCCCCCccEEEEecch-------------HHHHHHHHHHCCCEEEEecCCcchhhHH-HHHhh-hhchhhhhhh-
Q 022256 80 FAD-PFSVDITKLTVGYLEDA-------------EMEVVQVLAEKGIKMVPFKLNYTVDSVQ-GILNF-TMDVDMLAHF- 142 (300)
Q Consensus 80 ~~~-~~~~~~~~lrIg~~~~~-------------~~~a~~~L~~~G~~vvev~~~~~~~~~~-~~~~~-~~~~~~~~~~- 142 (300)
... ....+++++|||++.+. ++++++.|+++|++|+++++|....... ..+.. ......+...
T Consensus 249 ~~~~~~~~~~~~lrigv~~~~~~~~~~~~~v~~~~~~a~~~l~~~Ga~v~~v~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (475)
T COG0154 249 VPPALAGKDLKGLRIGVPKELGGGGPLDPDVRAAFEAAVKALEAAGAEVVEVSLPLLSDDYALAAYYLARFDGERYGLRA 328 (475)
T ss_pred ccchhhccCCCCcEEEEECcccccCCCcHHHHHHHHHHHHHHHHCCCEEEeccCCchhhhhhhhHHHHHHhhhhhhhhcc
Confidence 221 22345788999998752 4578999999999999999884433221 11100 0000000000
Q ss_pred HH-HHhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHH---HHHHHHHcc-CcEEEecCCC-------------
Q 022256 143 DE-WQRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKL---IREVKESFI-VDAFIGNVTD------------- 204 (300)
Q Consensus 143 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~---~~~~~~~~~-~D~li~P~~~------------- 204 (300)
.. +... ....+.+ ....++..|..++..+|.++...|.+. ++++.+.|+ +|+|++|++.
T Consensus 329 ~~~~~~~-~~~~~~~--~v~~ri~~G~~~~~~~~~~a~~~~~~~~~i~~~~~~~f~~~D~ll~Pt~~~~a~~ig~~~~~~ 405 (475)
T COG0154 329 ADLYGKT-RAEGFGP--EVKRRIMLGTYLLSAGYYDAYYRRAQKTLIRRAFDKLFEEVDVLLTPTTPTPAPKIGESESDG 405 (475)
T ss_pred hhhhhhh-hhhcccH--HHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEeCCCCCCCcccccccccc
Confidence 00 1111 0111111 122457788899999999998888555 899999887 9999999742
Q ss_pred ---------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCC
Q 022256 205 ---------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRP 274 (300)
Q Consensus 205 ---------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p 274 (300)
-.+|.++|++|+|++|||+|+..+| +|+||||||++++|..||++|+++|++++|++++|
T Consensus 406 ~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~G----------lPvGlqlig~~~~d~~LL~~a~~~E~~~~~~~~~~ 474 (475)
T COG0154 406 DDPLEMYLLDVFTVPANLAGLPAISVPAGFTADG----------LPVGLQLIGPAFDDATLLRLAAALEQALGWHRRPP 474 (475)
T ss_pred cCHHHHhhhccccccccccCCCeEEeccCCCCCC----------CCeeEEEecCCCCHHHHHHHHHHHHHhhCCCCCCC
Confidence 1357889999999999999998743 45999999999999999999999999999866554
No 2
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=7.4e-51 Score=378.39 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=199.7
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
++++|+|||||||||+|||||||||||||+|++|+.|+.+.+ ++|++|||||||+|+++++++|.|.++.|+.+...+
T Consensus 168 ~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-~~d~~Gp~arsv~D~~~~~~~l~g~~~~d~~~~~~~~ 246 (466)
T PRK06169 168 MGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-TLAHVGPMTRTVADAALLLDVIARPDARDWSALPPPT 246 (466)
T ss_pred CCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-cccccCCeeCCHHHHHHHHHHhcCCCCCCCcccCCCC
Confidence 689999999999999999999999999999999999998876 899999999999999999999999988877654322
Q ss_pred --CCCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH
Q 022256 80 --FADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW 145 (300)
Q Consensus 80 --~~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (300)
+......+.+++||||..+ +++++++.|+++|++|++++++.. +.. ..+......+....+..+
T Consensus 247 ~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 324 (466)
T PRK06169 247 TSFLDALDRDVRGLRIAYSPTLGYVDVDPEVAALVAQAVQRLAALGARVEEVDPGFS-DPV-EAFHVLWFAGAARLLRAL 324 (466)
T ss_pred cchhhhhccCCCCCEEEEECCcCCCCCCHHHHHHHHHHHHHHHHcCCEEEEeCCCcc-hHH-HHHHHHHHHHHHHHHHHh
Confidence 2111223467899999753 246789999999999999886522 111 111111222222222222
Q ss_pred HhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------------------
Q 022256 146 QRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------- 204 (300)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------- 204 (300)
... ..+.+.+. ...+++.+..++..+|.++++.|++++++|.++|+ +|+||+|++.
T Consensus 325 ~~~-~~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~ 401 (466)
T PRK06169 325 PPG-QRALLDPG--LRRIAERGATYSASDYLDATAVRAALGARMGAFHERYDLLLTPTLPIPAFEAGHDVPPGSGLTDWT 401 (466)
T ss_pred hhc-chhhcCHH--HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccCCCccchhhhh
Confidence 111 11222222 22356778889999999999999999999999996 9999999642
Q ss_pred --CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCC
Q 022256 205 --WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPP 275 (300)
Q Consensus 205 --~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~ 275 (300)
+.||.+||++|+|++|||+|+..+| +|+|+||+|++++|+.||++|+++|++++|.++.|+
T Consensus 402 ~~~~~t~~~nl~G~PaisvP~g~~~~G----------lPvGlQlvg~~~~d~~lL~~a~~le~~~~~~~~~p~ 464 (466)
T PRK06169 402 QWTPFTYPFNLTQQPAASVPCGFTAAG----------LPVGLQIVGPRHSDDLVLRVARAYEQALPWPHGAPA 464 (466)
T ss_pred hhhcccccccccCCCeEEEecCcCCCC----------CceEEEEecCCCcHHHHHHHHHHHHhhcCcccCCCC
Confidence 1368899999999999999987644 469999999999999999999999999998766665
No 3
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=2.1e-50 Score=382.46 Aligned_cols=256 Identities=23% Similarity=0.282 Sum_probs=203.0
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
+++||+|||||||||+||+||||||||||+|++|+.|++|.+.++||+|||||||+|+++++++|.|.|+.|+++...+.
T Consensus 163 ~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vGp~Arsv~D~~~~l~vl~g~d~~D~~s~~~p~ 242 (600)
T PRK08186 163 LVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDDADAVLAVMAGFDPADPYSRANPA 242 (600)
T ss_pred CcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCcccccccCCceecccCCHHHHHHHHHHhcCCCCCCcccccCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998887765443
Q ss_pred CCCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHHHh
Q 022256 81 ADPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEWQR 147 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (300)
.. .....+++|||+..+ +++++++.|+++|++|++++++...+....++......+.+..+..+..
T Consensus 243 ~~-~~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~ei~~~~~~~~~~~~~~~~~~ae~~~~~~~~~~ 321 (600)
T PRK08186 243 DA-PAALPAGPRVGVPRAAQLEFFGDAEAEAAFAAALARLEALGAELVEIDFSPFLEAARLLYEGPWVAERYAAVGEFLE 321 (600)
T ss_pred cc-ccccCCCCEEEEEcchhccccCCHHHHHHHHHHHHHHHHcCCeEEEecchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 112356799999742 2467899999999999999876432333222222222343344444332
Q ss_pred cCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC-------------------Ccc
Q 022256 148 SGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------WEK 207 (300)
Q Consensus 148 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------~~~ 207 (300)
.. .+.+.+. ....+..+..++..+|.+++++|+++++++.++|+ +|+||+|+.. ..|
T Consensus 322 ~~-~~~~~p~--~~~~i~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~D~Ll~Pt~p~~~~~~~~~~~~~~~~~~~~~y 398 (600)
T PRK08186 322 AH-PDAVDPV--VRGIIAGAAAFSAADAFRALYRLAELRRAAEAVLAGIDALLVPTAPTHPTIAEVAADPIGLNSRLGTY 398 (600)
T ss_pred hC-hhhcCHH--HHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCchhhcCCchhhhhhhhhc
Confidence 21 1222222 22356778889999999999999999999999996 9999999742 127
Q ss_pred ccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCC
Q 022256 208 VCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHH 270 (300)
Q Consensus 208 t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~ 270 (300)
|.++|++|+|+++||+|+..+| +|+||||||++++|+.||++|+.+|+.+++.
T Consensus 399 T~~~Nl~glPAisvP~g~~~~G----------lPvGvqlig~~~~D~~LL~~A~~le~~~~~~ 451 (600)
T PRK08186 399 TNFVNLLDLCALAVPAGFRADG----------LPFGVTLIAPAFADQALADLAARLQAALALP 451 (600)
T ss_pred cccccccCCCeEEEecccCCCC----------CCeeEEEEcCCCCHHHHHHHHHHHHhhcccc
Confidence 8899999999999999987654 4599999999999999999999999998764
No 4
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=3.4e-50 Score=377.58 Aligned_cols=256 Identities=25% Similarity=0.299 Sum_probs=201.6
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
+++||+|||||||||+||+||||||||||+|++|+.|++|.+.++||+|||||||+|+++++++|.|.|+.|+.+.+.++
T Consensus 126 ~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~s~~~p~ 205 (561)
T TIGR02713 126 LVPFALGTDTAGSGRVPAALNNIVGLKPTKGLVSTTGVVPACRSLDCVSIFALTVADAEQVLRIAAAPDARDPYSRPLPA 205 (561)
T ss_pred CCceEEeecCCCcchhhhHHhCceeEecCCCCccCCCccccccCCCeeechhCCHHHHHHHHHhhcCCCCcCccccCCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999988887765442
Q ss_pred CCCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHHHh
Q 022256 81 ADPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEWQR 147 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (300)
.. .....+++|||++.+ +++++++.|+++|++|++++++...+....++......+.+..+..+..
T Consensus 206 ~~-~~~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~v~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~ 284 (561)
T TIGR02713 206 AA-LRRLPPPPRVGVPRAAQLEFFGDSQAEAAFAAAVERLEALGVEVVEIDFAPFLETAALLYEGPWVAERYAAVGEFVE 284 (561)
T ss_pred hh-hcccCCCCEEEEECchhcCCCCCHHHHHHHHHHHHHHHHCCCEEEEecchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 112246789999861 2467899999999999999876433332222222222333333333332
Q ss_pred cCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC-------------------Ccc
Q 022256 148 SGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------WEK 207 (300)
Q Consensus 148 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------~~~ 207 (300)
.. .+.+.+. ....+..+..++..+|.+++++|+++++++.++|+ +|+|++|+.. ..|
T Consensus 285 ~~-~~~~~p~--~~~~l~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~DvLl~Pt~p~~~~~~~~~~~~~~~~~~~~~y 361 (561)
T TIGR02713 285 AQ-PDALDPV--VRGIITSATRFSAADAFAAQYRLAALRRKAEALLAGVDVLLVPTAPTHPTIEEVLADPVGLNSRLGTY 361 (561)
T ss_pred hC-hhhcCHH--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCchhccCCchhhhhhhhcc
Confidence 21 2222232 22356678889999999999999999999999996 9999999742 137
Q ss_pred ccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCC
Q 022256 208 VCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHH 270 (300)
Q Consensus 208 t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~ 270 (300)
|.++|++|+|+++||+|+..+| +|+||||+|++++|+.||++|+.+|++.++.
T Consensus 362 T~~~Nl~glPAisvP~g~~~~G----------lPvGvqlig~~~~D~~LL~~A~~le~~~~~~ 414 (561)
T TIGR02713 362 TNFVNLLDLCAVAVPAGFRSDG----------LPFGVTLIGPAFHDAALASLGRRLQAASALP 414 (561)
T ss_pred cccccccCCceEEeecccCCCC----------CCEEEEEEcCCCChHHHHHHHHHHHhccCcc
Confidence 8899999999999999987644 4599999999999999999999999997763
No 5
>PRK07486 amidase; Provisional
Probab=100.00 E-value=3.5e-50 Score=375.49 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=195.2
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCC-cCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVM-SISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~-~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~ 79 (300)
++++|+|||||||||+||+||||||||||+|+||+.|.. ++++++|++|||||||+|+++++++|.|.|+.|+.+...+
T Consensus 173 ~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~ 252 (484)
T PRK07486 173 MLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQQLGTEGPMGRTVEDVALLLAVQAGYDPRDPLSLAED 252 (484)
T ss_pred CCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCcccccccccccCCeeCCHHHHHHHHHHHhCCCCCCCccccCC
Confidence 589999999999999999999999999999999999755 6889999999999999999999999999998887654221
Q ss_pred ---CCCCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhH
Q 022256 80 ---FADPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFD 143 (300)
Q Consensus 80 ---~~~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (300)
+......+.+++||||+.+ +++++++.|+++|++|+++.++.........+...........+.
T Consensus 253 ~~~~~~~~~~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (484)
T PRK07486 253 PARFAQPLEADLRGKRIAWLGDWGGYLPMEAGVLELCEAALATLRELGCDVEAALPAFPPERLWRAWLTLRHFLVGGSLL 332 (484)
T ss_pred CcchhhHhccCCCCCEEEEeCcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCcchHHHHHHHHHHHHHHHHHhHH
Confidence 2111223467899998742 245788999999999988776532222211111111011111111
Q ss_pred HHHhc-CCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCCC----------------
Q 022256 144 EWQRS-GKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTDW---------------- 205 (300)
Q Consensus 144 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~~---------------- 205 (300)
..... .....+.+. ...+++.+..++..+|.++++.|++++++|.++|+ +|+||+|+...
T Consensus 333 ~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~~~~~~~~~~~~~~~~ 410 (484)
T PRK07486 333 ALYRDPARRALLKPE--AIWEIEGGLALTAAQVYEASVIRSAWYQALLRLFERYDFLALPTAQVFPFDAEWRWPRAIAGR 410 (484)
T ss_pred HHhccccchhhcCHH--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCccccccccccccc
Confidence 11110 011122222 22346778889999999999999999999999996 99999996420
Q ss_pred ---------ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCC
Q 022256 206 ---------EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPP 275 (300)
Q Consensus 206 ---------~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~ 275 (300)
.+|.+||++|+|++|||+|+..+| +|+||||+|++++|+.||++|+++|++++|+++.|+
T Consensus 411 ~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~g----------lPvGlQlvg~~~~D~~lL~~a~~le~~~~~~~~~p~ 479 (484)
T PRK07486 411 AMDTYHRWMEVVVPATLAGLPAISVPVGFNAAG----------LPMGMQIIGPPRADLAVLQLAHAYEQATDWVQRRPP 479 (484)
T ss_pred hhhhhhhhhcccccccccCCCeEEEECCcCCCC----------CceEEEEECCCCCHHHHHHHHHHHHhccCcccCCCc
Confidence 135589999999999999986543 469999999999999999999999999988655454
No 6
>PRK07235 amidase; Provisional
Probab=100.00 E-value=3.1e-50 Score=375.62 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=188.2
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||+.|++++++++|++|||||||+|+++++++|+|.|+.|+.+...+.
T Consensus 183 ~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~~sld~~Gpmarsv~D~a~ll~viag~d~~d~~~~~~~~ 262 (502)
T PRK07235 183 EVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPMTATVRDNALLLEVIAGRDGLDPRQPAQPP 262 (502)
T ss_pred CCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCcccccCeeeceeCCHHHHHHHHHHHcCCCCCCccccccCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999988876653221
Q ss_pred C----CCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhh-----
Q 022256 81 A----DPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDM----- 138 (300)
Q Consensus 81 ~----~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~----- 138 (300)
. ..+....+++|||+..+ +++++++.|+++|++|+++++|...... .++........
T Consensus 263 ~~~~~~~l~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~V~~v~~p~~~~~~-~~~~~~~~~~~~~~~~ 341 (502)
T PRK07235 263 VDDYTAALDRGVKGLKIGILREGFGLPNSEPEVDEAVRAAAKRLEDLGATVEEVSIPLHRLAL-AIWNPIATEGATAQMM 341 (502)
T ss_pred ccchhHHhccCCcCCEEEEeccccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhHH-HHHHHHHHHHHHHHhh
Confidence 1 11223468899999753 2457889999999999999987532211 11111110000
Q ss_pred -----------------hhhhHHHHhcCCCchhhhhhccHHHHHhhh----ccCHHHHHHHHHHHHHHHHHHHHHcc-Cc
Q 022256 139 -----------------LAHFDEWQRSGKDDVYEAQDQWPVELRRSR----IITAVDYMQAQRARGKLIREVKESFI-VD 196 (300)
Q Consensus 139 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~s~~~~~~a~~~r~~~~~~~~~~~~-~D 196 (300)
...+..+... ..+.+.+. ...++..+. .++..+|.++++.|+++++++.++|+ +|
T Consensus 342 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~g~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~D 418 (502)
T PRK07235 342 LGNGYGFNWKGLYDTGLLDAFGAGWRE-RADDLSET--VKLVMLLGQYGLERYHGRYYAKARNLARRLRAAYDEALRKYD 418 (502)
T ss_pred hccccccccccccchhHHHHHhhhhhc-chhhcCHH--HHHHHHhcccccccCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0001000000 01111111 112333333 46778999999999999999999996 99
Q ss_pred EEEecCCC----------------------C-ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCCh
Q 022256 197 AFIGNVTD----------------------W-EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHD 253 (300)
Q Consensus 197 ~li~P~~~----------------------~-~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D 253 (300)
+||+|++. + .||.+||++|+|++|||+|+. +| +|+|+||||++++|
T Consensus 419 vll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PalsvP~g~~-~G----------lPvGlQlvg~~~~D 487 (502)
T PRK07235 419 LLVMPTTPMVATPLPAPDASREEYVSRALEMIANTAPFDVTGHPAMSVPCGLV-DG----------LPVGLMLVGRHFDE 487 (502)
T ss_pred EEeeCCCCCCCCCcccccCchHHHHHHHHhhhccCccchhhCCCeEEEECCcC-CC----------CCeEEEEeCCCCCH
Confidence 99999742 1 267889999999999999984 33 46999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 022256 254 HIALALAIAYQSVT 267 (300)
Q Consensus 254 ~~lL~~a~~lE~~~ 267 (300)
+.||++|+++|++.
T Consensus 488 ~~lL~~A~~~E~~~ 501 (502)
T PRK07235 488 ATILRAAAAFEASG 501 (502)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999864
No 7
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=1e-49 Score=369.22 Aligned_cols=246 Identities=24% Similarity=0.313 Sum_probs=189.9
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||++|++|+++++|++|||||||+|+++++++|.|.++.|...
T Consensus 168 ~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~~~~~~~~----- 242 (452)
T PRK06102 168 LVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVRDAVWIDAAMRGLTAPDVVR----- 242 (452)
T ss_pred CCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCcccccccCcccCccCCHHHHHHHHHHHcCCCCccccc-----
Confidence 589999999999999999999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHH--HHhhhhchhhhhhhHHHH
Q 022256 81 ADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDEWQ 146 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 146 (300)
..++++||++..+ +++++++.|+++|++|++++++...+.... .+......+....+..+.
T Consensus 243 -----~~~~~~ri~~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 317 (452)
T PRK06102 243 -----RPLAGLRLVVPETVVFDDAEPGVRAAFEAAVERLQAAGALVERQAFPAFQEILDLIARHGWLVTAEAFALHQERL 317 (452)
T ss_pred -----cCCCCCEEEEecchhcccCCHHHHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1246688987543 245678999999999999887642222211 111111223333333332
Q ss_pred hcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHccCcEEEecCCC----------------------
Q 022256 147 RSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFIVDAFIGNVTD---------------------- 204 (300)
Q Consensus 147 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~~D~li~P~~~---------------------- 204 (300)
.......+.+. ...++..+..++..+|.++++.|+++++++.++|++|+||+|+..
T Consensus 318 ~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~ 395 (452)
T PRK06102 318 DGPDAARMDPR--VVKRTRLGRKITASDYIALLEARERLIAQVTRELGGALLATPTVAHVAPPLAPLEADDDLFFATNLK 395 (452)
T ss_pred hccchhhCCHH--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCccccccCchhhhhhhhh
Confidence 21111122222 223566788899999999999999999999999999999998641
Q ss_pred -CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcC
Q 022256 205 -WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 205 -~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
+.||.+||++|+|++|||+|+..+| +|+||||+|++++|+.||++|+++|++++
T Consensus 396 ~~~~t~~~nl~g~PaisvP~g~~~~g----------lPvGlQivg~~~~D~~lL~~a~~le~~l~ 450 (452)
T PRK06102 396 TLRNTMPGNFLDMCGVSLPCGTGAAG----------MPVGLLLSAPAGRDERLLRAALAVEAVIR 450 (452)
T ss_pred hhhcCccccccCCCeEEEecCCCCCC----------CCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 0267899999999999999987544 46999999999999999999999999874
No 8
>PRK07056 amidase; Provisional
Probab=100.00 E-value=1.1e-49 Score=369.06 Aligned_cols=244 Identities=22% Similarity=0.308 Sum_probs=190.3
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||+.|+.++++++|++|||||||+|+++++++|.|.++.|+..
T Consensus 172 ~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~d~~~----- 246 (454)
T PRK07056 172 MAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACCALVDAVLAGEEPVVPAA----- 246 (454)
T ss_pred CCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCccccCcccCccCCHHHHHHHHHHhcCCCCCCccc-----
Confidence 689999999999999999999999999999999999999999999999999999999999999999988766532
Q ss_pred CCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHH-hhhhchhhhhhhHHHHh
Q 022256 81 ADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGIL-NFTMDVDMLAHFDEWQR 147 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 147 (300)
.+.+++||||+.+ +++++++.|+++|++|++++++...+...... ......+....+..+..
T Consensus 247 -----~~~~~lrig~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 321 (454)
T PRK07056 247 -----RPLEGLRLAVPTTVVLDGLDATVAAAFERALKRLSAAGAIIEEIAFPELAELAEINAKGGFSAAESYAWHRPLLA 321 (454)
T ss_pred -----ccccCcEEEEcchhhccCCCHHHHHHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 1256799998754 24678899999999999998764322221111 11122233333333322
Q ss_pred cCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCCC---------------------
Q 022256 148 SGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTDW--------------------- 205 (300)
Q Consensus 148 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~~--------------------- 205 (300)
.. .+.+.+. ...++..+..++..+|.++++.|++++++|.++|+ +|+||+|+...
T Consensus 322 ~~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~ 398 (454)
T PRK07056 322 RH-RDQYDPR--VAARILRGEPMSAADYIDLLAARAAWIARAAARLARFDALVMPTVPIVPPRIADLEADDAAFFRTNAL 398 (454)
T ss_pred hh-hhhCCHH--HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCEEEECCCCCCCCCcccccccchhhHHHHHH
Confidence 11 1122222 22356778889999999999999999999999996 99999997420
Q ss_pred --ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcC
Q 022256 206 --EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 206 --~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
.||.+||++|+|++|||+|.. + |+|+|+||+|++++|+.||++|+++|++++
T Consensus 399 ~~~~t~~~nl~g~PaisvP~g~~-~----------glPvGlqivg~~~~D~~lL~~a~~le~~l~ 452 (454)
T PRK07056 399 LLRNPSLINFLDGCALSLPCHAP-G----------EAPVGLMLAGAPGRDDRLLAIALAVEAVLR 452 (454)
T ss_pred HhhcCccchhcCCCEEEEeCCCC-C----------CCCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 157789999999999999953 2 356999999999999999999999999874
No 9
>PRK07487 amidase; Provisional
Probab=100.00 E-value=1.9e-49 Score=368.97 Aligned_cols=251 Identities=22% Similarity=0.239 Sum_probs=191.5
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCc----CC-CCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMS----IS-ESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSS 75 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~----~~-~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~ 75 (300)
++++|+|||||||||+|||||||||||||+|+||+.|+++ ++ .++|++|||||||+|+++++++|.|.++.|+.+
T Consensus 168 ~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~d~~d~~~ 247 (469)
T PRK07487 168 IGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAPDPRDPWW 247 (469)
T ss_pred CCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCCCCCCCcc
Confidence 5899999999999999999999999999999999999863 33 478999999999999999999999999888766
Q ss_pred CCCCCCCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEe-cCCcchhhHHHHHhhhhchhhhhhh
Q 022256 76 RDFPFADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPF-KLNYTVDSVQGILNFTMDVDMLAHF 142 (300)
Q Consensus 76 ~~~~~~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev-~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (300)
.+.++. ...+++|||++.+ +++++++.|+++|++|+++ +++...+.. ..+......+....+
T Consensus 248 ~~~~~~----~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~-~~~~~~~~~e~~~~~ 322 (469)
T PRK07487 248 VPAPLE----GPPRPKRVALCVRPDGLDVDPEVEAALRDAARRLEDAGWTVEEVDDTPPLREAA-ELQERLWLGDGYEAL 322 (469)
T ss_pred CCCCcc----CCCCCcEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCchHHHH-HHHHHHHHHHHHHHH
Confidence 543332 2357899999753 2467889999999999998 766432222 222222223433333
Q ss_pred HHHHhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCCC----------------
Q 022256 143 DEWQRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTDW---------------- 205 (300)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~~---------------- 205 (300)
..+........+.. .+...+..+..++..+|.++++.|++++++|.++|+ +|+||+|++..
T Consensus 323 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~p~~a~~~~~~~~~~~~~~ 400 (469)
T PRK07487 323 LAAAEAEGDPGALA--ALRGQRAKARPLDLAGYMNALARRATLTRQWQLFFEDYPLLLMPVSAELPFPDDLDRQGAEGFR 400 (469)
T ss_pred HHHHHhhchhhhhH--HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCCCCcCCchhhhh
Confidence 33322111111211 112234666788999999999999999999999996 99999997420
Q ss_pred ------ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCC
Q 022256 206 ------EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDH 269 (300)
Q Consensus 206 ------~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~ 269 (300)
.++.++|++|+|++|||+|+.. |+|+|+||||++++|+.||++|+++|+++++
T Consensus 401 ~~~~~~~~t~~~nl~G~PaisvP~g~~~-----------GlPvGlQlvg~~~~D~~lL~~a~~lE~~~~~ 459 (469)
T PRK07487 401 RVWEAQLPQIALPFMGLPGLSVPTGLVG-----------GVPVGVQLVAGRFREDLCLAAGEAIEARGGP 459 (469)
T ss_pred HHHHhhcccccccccCCCeEEEECccCC-----------CcceeEEEeCCCCCHHHHHHHHHHHHHhhCC
Confidence 1245789999999999999762 3569999999999999999999999998764
No 10
>PRK06170 amidase; Provisional
Probab=100.00 E-value=2.5e-49 Score=370.56 Aligned_cols=256 Identities=24% Similarity=0.327 Sum_probs=186.9
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCc-----C--CCCCcccCcCCCCHHHHHHHHHHHcCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMS-----I--SESLDKLGPFCRSAADCTIVLDAIQGKDPDDL 73 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~-----~--~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~ 73 (300)
++++|+|||||||||+|||||||||||||+|+||+.|++| + +.++|++|||||||+|+++++++|.|+|+.|+
T Consensus 171 ~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g~d~~d~ 250 (490)
T PRK06170 171 FGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQADLAVAGPMARSARDLALLLDVMAGPDPLDG 250 (490)
T ss_pred CCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccccccccccCccCCHHHHHHHHHHHhCCCcccc
Confidence 5899999999999999999999999999999999999988 4 34689999999999999999999999988773
Q ss_pred CC-CCCCCCCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCC-cchhhHHHHHhhhhchhhh
Q 022256 74 SS-RDFPFADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLN-YTVDSVQGILNFTMDVDML 139 (300)
Q Consensus 74 ~~-~~~~~~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~-~~~~~~~~~~~~~~~~~~~ 139 (300)
.. ...........+++++|||+..+ +++++++.|+++|++|++++.+ ...+.....+......+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (490)
T PRK06170 251 GVAYRLALPPARHGRLKDFRVLVLDEHPLLPTDAAVRAAIERLAAALADAGARVVRHSPLLPDLAESARLYMRLLFAASA 330 (490)
T ss_pred ccccccCCCcccccccCCCEEEEECCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEEcCCCCCchHHHHHHHHHHHHHHHh
Confidence 31 11111111123467899999764 2467889999999999988632 1222222222111111211
Q ss_pred hhhH-HHHhc---C--CCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------
Q 022256 140 AHFD-EWQRS---G--KDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------- 204 (300)
Q Consensus 140 ~~~~-~~~~~---~--~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------- 204 (300)
..+. .+..+ . ....+.+ .....+..+..++..+|.++++.|+++++++.++|+ +|+||+|++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~ 408 (490)
T PRK06170 331 ARFPPDAYADAQARAAGLSADDR--SLAAERLRGAVLSHRDWLFADAAREELRAAWRRFFAEFDVVLCPVTPTPAFPHDH 408 (490)
T ss_pred hccchhHHHHhhhccccccchhH--HHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCc
Confidence 1111 11000 0 0011111 122235667788999999999999999999999996 9999999641
Q ss_pred ---------------------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHH
Q 022256 205 ---------------------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAY 263 (300)
Q Consensus 205 ---------------------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~l 263 (300)
+.||.+||++|+|++|||+|+..+| +|+||||||++++|+.||++|+++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~G----------lPvGlQlig~~~~D~~LL~~a~~l 478 (490)
T PRK06170 409 APDPLERRIDIDGVSYPYWDQLVWAGLATLPGLPATAIPIGLSATG----------LPVGVQIVGPALEDRTPLRLAELL 478 (490)
T ss_pred cccccccccccCCcccchhhhhhhcceecccCCCeEEEECCcCCCC----------CceeEEEecCCCCHHHHHHHHHHH
Confidence 1256689999999999999987544 459999999999999999999999
Q ss_pred HhhcC
Q 022256 264 QSVTD 268 (300)
Q Consensus 264 E~~~~ 268 (300)
|+.++
T Consensus 479 E~~~~ 483 (490)
T PRK06170 479 EEEFG 483 (490)
T ss_pred HHhcC
Confidence 99864
No 11
>PRK07042 amidase; Provisional
Probab=100.00 E-value=4.4e-49 Score=366.30 Aligned_cols=258 Identities=17% Similarity=0.232 Sum_probs=194.1
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
++++|+|||||||||+|||||||||||||+|+||..|.. ++|++|||||||+|+++++++|.|+|+.|+.+.+.+
T Consensus 167 ~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~----~~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~ 242 (464)
T PRK07042 167 YGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY----TGRCAGPMTRTVDDAALLMSVLSRPDARDGTSLPPQD 242 (464)
T ss_pred CCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc----cccccCCccCCHHHHHHHHHHhcCCCCCCccccCCCC
Confidence 589999999999999999999999999999999998853 358999999999999999999999998887654321
Q ss_pred --CCCCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHH
Q 022256 80 --FADPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDE 144 (300)
Q Consensus 80 --~~~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (300)
+. ....+++++||||+.+ +++++++.|+++|++|++++++.. +.....+......+....+..
T Consensus 243 ~~~~-~~~~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 320 (464)
T PRK07042 243 IDWS-DLDIDVRGLRIGLMLDAGCGLAVDPEVRAAVEAAARRFEAAGAIVEPVPPFLT-RAMLDGLDRFWRARLWSDLAA 320 (464)
T ss_pred cChh-hhccCcCCCEEEEECcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCchh-HHHHHHHHHHHHHHHHHHHHH
Confidence 11 1123457899998743 245788999999999999875422 212111111111122222222
Q ss_pred HHhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC-------------------
Q 022256 145 WQRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD------------------- 204 (300)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~------------------- 204 (300)
+.... .+.+.+. ...++..+..++..+|.+++..|.++++++.++|+ +|+||+|+..
T Consensus 321 ~~~~~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~ 397 (464)
T PRK07042 321 LPPER-RAKVLPY--IRRWAEGGADLSGVEAVRGFNQTFAMRAAAARLFAEFDYVLSPVAPVPAFPAEWASPTNDPARPF 397 (464)
T ss_pred Hhhhh-hhhcCHH--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccchhhh
Confidence 22111 1112221 22356678889999999999999999999999995 9999999742
Q ss_pred --CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCCCC
Q 022256 205 --WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPPID 277 (300)
Q Consensus 205 --~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~~~ 277 (300)
+.||.+||++|+|++|||+|+..+| +|+|+||+|++++|+.||++|+++|++++|++++|.++
T Consensus 398 ~~~~~t~~~nl~G~PaisvP~g~~~~G----------lPvGlQlvg~~~~D~~lL~~a~~le~~~~~~~~~~~~~ 462 (464)
T PRK07042 398 EHIAFTVPWNMSEQPAASINCGFTRDG----------LPIGLQIVGPRFDDLGVLRLAKAFEGWRGPQRPWPEPP 462 (464)
T ss_pred cccccccceeccCCCeEEeecCcCCCC----------CCeEEEEecCCCcHHHHHHHHHHHHHhccccccCCCcC
Confidence 1267899999999999999986544 46999999999999999999999999999988877664
No 12
>PRK08137 amidase; Provisional
Probab=100.00 E-value=8.2e-49 Score=367.39 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=192.0
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|.|+.|+.+...++
T Consensus 174 ~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~ 253 (497)
T PRK08137 174 LAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVADAAAVLTAIAGGDPADPATASAPA 253 (497)
T ss_pred CCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCcccccCcccCeeCCHHHHHHHHHHHhCCCCCCcccccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999988876654332
Q ss_pred CC-----CCC-CCCCccEEEEecc----------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHH
Q 022256 81 AD-----PFS-VDITKLTVGYLED----------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDE 144 (300)
Q Consensus 81 ~~-----~~~-~~~~~lrIg~~~~----------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (300)
.. ... .+++++||||+.+ +++++++.|+++|++|++++++.... +...+...+..|....+..
T Consensus 254 ~~~~~~~~~~~~~~~~lrIgv~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~ 332 (497)
T PRK08137 254 PAVDYVAALDADALRGARLGVARNYLGYHPEVDAQFERALAELKAAGAVVIDVVDLDDGD-WGEAEKVVLLHEFKAGLNA 332 (497)
T ss_pred CccchhhhccccccCCCEEEEEchhccCCHHHHHHHHHHHHHHHHCCCEEEeccCCchhh-HHHHHHHHHHHHHHHHHHH
Confidence 11 111 1367899999753 34678899999999999988663221 2111111222232222222
Q ss_pred HHhcC-----C-----------------CchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHH--HHHHHHHc---cCcE
Q 022256 145 WQRSG-----K-----------------DDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKL--IREVKESF---IVDA 197 (300)
Q Consensus 145 ~~~~~-----~-----------------~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~--~~~~~~~~---~~D~ 197 (300)
+.... . ...+.+ ....++..+..++..+|.++++.++++ +++|.++| ++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~D~ 410 (497)
T PRK08137 333 YLRSTAPHAPVRTLADLIAFNRAQHAREMPYFGQ--ELFEQAQAAPGLDDPAYLDALADAKRLAGPEGIDAALKEHRLDA 410 (497)
T ss_pred HHHHhcCCCCCCCHHHHHHHhhccchhhhcccCH--HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 21100 0 001111 122345556778899999988755554 37888888 3899
Q ss_pred EEecCCCC--------------ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHH
Q 022256 198 FIGNVTDW--------------EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAY 263 (300)
Q Consensus 198 li~P~~~~--------------~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~l 263 (300)
||+|+... .++.++|++|+|++|||+|+. +| +|+||||+|++++|+.||++|+++
T Consensus 411 ll~Pt~~~ap~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~G----------lPvGvQlig~~~~d~~LL~~a~~l 479 (497)
T PRK08137 411 LVAPTTGPAWLIDLINGDSFGGSSSTPAAVAGYPHLTVPMGQV-QG----------LPVGLSFIGAAWSEARLLELGYAY 479 (497)
T ss_pred EEeCCCCCCcccccccccccccccccccHhhCCCeEEEeCCCC-CC----------cCeEEEEECCCCCHHHHHHHHHHH
Confidence 99997521 246789999999999999986 33 469999999999999999999999
Q ss_pred HhhcCCCCCCCCC
Q 022256 264 QSVTDHHKQRPPI 276 (300)
Q Consensus 264 E~~~~~~~~~p~~ 276 (300)
|+..+|+ ++|.+
T Consensus 480 E~~~~~~-~~p~~ 491 (497)
T PRK08137 480 EQATHAR-REPRF 491 (497)
T ss_pred HHhcCcC-CCCCC
Confidence 9998875 34433
No 13
>PRK06061 amidase; Provisional
Probab=100.00 E-value=9e-49 Score=365.38 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=194.7
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||+.|+.+.+.++|++|||||||+|+++++++|.|.++.|+.+...+.
T Consensus 176 ~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~ 255 (483)
T PRK06061 176 LVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVADAALLLDAASGNHPGDRHRPPPVT 255 (483)
T ss_pred CCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCcccccCceeCCEeCCHHHHHHHHHHHhCCCCCCCcccCCcc
Confidence 58999999999999999999999999999999999999888889999999999999999999999999888765432111
Q ss_pred -CCCCCCCCCccEEEEecc----------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhH
Q 022256 81 -ADPFSVDITKLTVGYLED----------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFD 143 (300)
Q Consensus 81 -~~~~~~~~~~lrIg~~~~----------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (300)
........+++||||+.+ +++++++.|+++|++|++++++........+. . .....+.
T Consensus 256 ~~~~~~~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~--~---~~~~~~~ 330 (483)
T PRK06061 256 VSDAVGRAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALLGHTVVPADPDYGLRLGLNFL--P---RSTAGLR 330 (483)
T ss_pred chhhhccCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHCCCEEEEeCCchhhHHHHHHH--H---HHHHHHH
Confidence 011122357899999641 24578899999999999877542211111110 0 1111112
Q ss_pred HHHhcC-CCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC-----------------
Q 022256 144 EWQRSG-KDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD----------------- 204 (300)
Q Consensus 144 ~~~~~~-~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~----------------- 204 (300)
.+.... ....+.+. ...+++.+..++..+|.++++.|+++++++.++|+ +|+||+|+..
T Consensus 331 ~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~ 408 (483)
T PRK06061 331 DWAERLGDPVLLDPR--TVSNARMGRLLSQAILRLARAAEAAAQRRVGSIFDIVDVVLAPTTAQPPPRVGAFDRLGGWAT 408 (483)
T ss_pred HHHhhccChhhCCHH--HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccchh
Confidence 221110 11122222 22356678889999999999999999999999996 9999998641
Q ss_pred -------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCC
Q 022256 205 -------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPP 275 (300)
Q Consensus 205 -------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~ 275 (300)
+.||.+||++|+|++|||+|+..+| +|+||||||++++|+.||++|+++|++++|..+.|+
T Consensus 409 ~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~G----------lPvGlQivg~~~~D~~LL~~A~~le~~~~~~~~~p~ 476 (483)
T PRK06061 409 DRAMIAACPYTWPWNVLGWPSINVPAGFTSDG----------LPIGAQLMGPANSEPLLISLAAQLEAVSGWAERQPP 476 (483)
T ss_pred hhhhhhcccccccccccCCCeEEEecCcCCCC----------CCeeeEEECCCCCHHHHHHHHHHHHhhcCcccCCCC
Confidence 1267789999999999999986644 459999999999999999999999999988655554
No 14
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=3.9e-49 Score=366.74 Aligned_cols=253 Identities=26% Similarity=0.450 Sum_probs=186.9
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||++|++|+++++|++|||||||+|+++++++|.|.++.|+.+...++
T Consensus 151 ~~~~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~~~~d~~~~~~~~ 230 (460)
T TIGR00132 151 LAPFSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPD 230 (460)
T ss_pred CCCeEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCcccCCCcccCeeCCHHHHHHHHHHHcCCCCCCCcccCCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999888876654332
Q ss_pred CC---CCCCCCCccEEEEecc-----------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH-
Q 022256 81 AD---PFSVDITKLTVGYLED-----------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW- 145 (300)
Q Consensus 81 ~~---~~~~~~~~lrIg~~~~-----------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 145 (300)
.+ ....+.+++|||+..+ +++++++.|+++|++|+++++|...+. ...+......+....+..+
T Consensus 231 ~~~~~~~~~~~~~lrig~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~p~~~~~-~~~~~~~~~~e~~~~~~~~~ 309 (460)
T TIGR00132 231 PEFFEELKKDLKGLKVGVVKEFSEEMDKEVQEKFENALEVLEELGAEIVEVSFPHVKYA-LPIYYIISPSEASSNLARYD 309 (460)
T ss_pred cchhhhhhcccCCCEEEEECcccccCCHHHHHHHHHHHHHHHHCCCEEEEeCCCcHHHH-HHHHHHHHHHHHHHHHhccc
Confidence 21 1112467899999764 246788999999999999987743222 1111112222222111111
Q ss_pred -----------------HhcCCCchhhhhhccHHHHHhhhccC-----HHHHHHHHHHHHHHHHHHHHHcc-CcEEEecC
Q 022256 146 -----------------QRSGKDDVYEAQDQWPVELRRSRIIT-----AVDYMQAQRARGKLIREVKESFI-VDAFIGNV 202 (300)
Q Consensus 146 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~s-----~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~ 202 (300)
........+.+ ....++..+...+ ..+|.++++.|+++++++.++|+ +|+|++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt 387 (460)
T TIGR00132 310 GIRYGYRIEEPNSLKELYAKTRAEGFGE--EVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPT 387 (460)
T ss_pred cccccccccccccHHHHHhhcchhhcCH--HHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCC
Confidence 11000011111 1112333343333 34588899999999999999995 99999997
Q ss_pred CC-------------------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHH
Q 022256 203 TD-------------------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAY 263 (300)
Q Consensus 203 ~~-------------------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~l 263 (300)
.. +.||.+||++|+|++|||+|+..+| +|+||||+|++++|+.||++|+++
T Consensus 388 ~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~G----------lPvGlqlig~~~~D~~lL~~A~~l 457 (460)
T TIGR00132 388 APTLPFKIGEKLDDPLEMYLSDILTVPANLAGLPAISVPCGVKEKG----------LPIGLQIIGKCFDDKTLLQVSYAF 457 (460)
T ss_pred CCCCCCCcccccCchHhhhcccceeccccccCCCcEEEecCcCCCC----------CCeeEEEECCCCchHHHHHHHHHH
Confidence 42 1267789999999999999986544 469999999999999999999999
Q ss_pred Hhh
Q 022256 264 QSV 266 (300)
Q Consensus 264 E~~ 266 (300)
|++
T Consensus 458 e~~ 460 (460)
T TIGR00132 458 EQA 460 (460)
T ss_pred hhC
Confidence 974
No 15
>PRK05962 amidase; Validated
Probab=100.00 E-value=1.5e-48 Score=358.65 Aligned_cols=243 Identities=22% Similarity=0.326 Sum_probs=188.8
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||+.|++++++++|++|||||||+|+++++++|.|.++.+...
T Consensus 142 ~~~~alGtDtgGSiRiPAa~cGv~GlKPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~~~----- 216 (424)
T PRK05962 142 TSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVADCAAADAVMAGEKPIPLEV----- 216 (424)
T ss_pred CCceEEeeCCCCcchhhhHhhCceeeecCCCceeCCCcccCccccCccccccCCHHHHHHHHHHHcCCCCCcccc-----
Confidence 589999999999999999999999999999999999999999999999999999999999999999987654311
Q ss_pred CCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHh--hhhchhhhhhhHHHH
Q 022256 81 ADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILN--FTMDVDMLAHFDEWQ 146 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 146 (300)
...+++|||++.+ +++++++.|+++|++|++++++...+.+...+. .....+....+..+.
T Consensus 217 -----~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 291 (424)
T PRK05962 217 -----LPVAGLRIGLPKGYLLADMEPDVAAAFEASLAALEKAGARIADLAIDDLIARLAEATRIGSIAGIEASHIHADWL 291 (424)
T ss_pred -----cCcCCcEEEEEcccccccCCHHHHHHHHHHHHHHHHCCCEEEEeccchHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1246789998753 246788999999999999987642222221111 112223333333333
Q ss_pred hcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC---------------C-----
Q 022256 147 RSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD---------------W----- 205 (300)
Q Consensus 147 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~---------------~----- 205 (300)
... ...+.+. ...++..+..++..+|.++++.|.+++++|.++|+ +|+|++|+.. +
T Consensus 292 ~~~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~ 368 (424)
T PRK05962 292 ADL-DANVDIR--VKRPLSRRIKVPLEAYHRLMRTRAALARAMDERLAGFDMFALPATPIVAPTIASVSEDEEEYDRVEN 368 (424)
T ss_pred hhc-hhhCCHH--HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCccccccchHHHHHHHH
Confidence 221 1222222 22356677889999999999999999999999996 9999999641 0
Q ss_pred ---ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcC
Q 022256 206 ---EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 206 ---~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
.||.++|++|+|++|||+|. + |+|+||||+|++++|+.||++|+++|+++.
T Consensus 369 ~~~~~t~~~n~~G~Pa~svP~g~--~----------glPvGlqlvg~~~~D~~lL~~a~~le~~l~ 422 (424)
T PRK05962 369 LLLRNTQVANQFDLCSITLPMPG--M----------ALPAGLMLTARNGSDRRLLAAAASVEKLLE 422 (424)
T ss_pred HHHhhCcCccccCCCeEEEECCC--C----------CCCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 16778999999999999973 2 356999999999999999999999999874
No 16
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=2.4e-48 Score=362.07 Aligned_cols=246 Identities=25% Similarity=0.348 Sum_probs=185.2
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|+||++|++|+++++|++|||||||+|+++++++|.|.++.+..
T Consensus 169 ~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~~~~------ 242 (472)
T PRK07488 169 LAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVADLALLDAVITGDAALPAP------ 242 (472)
T ss_pred CCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCcccccccCCcccCccCCHHHHHHHHHHhcCCCCCCCC------
Confidence 68999999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred CCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHHHhc
Q 022256 81 ADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEWQRS 148 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (300)
..++++|||+..+ +++++++.|+++|++|++++++...+.....+......+....+..+...
T Consensus 243 -----~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 317 (472)
T PRK07488 243 -----VALAGLRLGVPAAPFWDGLDPDVAAVAEAALAKLAAAGVTFVELDLPGLHELNEAVGFPIALYEALADLRAYLRE 317 (472)
T ss_pred -----cCcCCCEEEEEcchhccCCCHHHHHHHHHHHHHHHHCCCEEEeeCCcCHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 1357899998763 24678899999999999988764222111111111222332333333211
Q ss_pred CCCch---------hhhhhccHHHH---HhhhccCHHHHHHHHHH-HHHHHHHHHHHcc---CcEEEecCCCC-------
Q 022256 149 GKDDV---------YEAQDQWPVEL---RRSRIITAVDYMQAQRA-RGKLIREVKESFI---VDAFIGNVTDW------- 205 (300)
Q Consensus 149 ~~~~~---------~~~~~~~~~~l---~~~~~~s~~~~~~a~~~-r~~~~~~~~~~~~---~D~li~P~~~~------- 205 (300)
..... ..+. ....+ ..+..++..+|.++++. |+.+++++.++|+ +|+||+|+...
T Consensus 318 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~ 395 (472)
T PRK07488 318 NGAGVSFEELVARIASPD--VRAIFRDLLDPPQISEDAYRAALDVGRPRLQAWYRQAFARHGLDAILFPTTPLTAPPIGD 395 (472)
T ss_pred cCCCCCHHHHHhhccCHH--HHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEeCCCCCCCccccc
Confidence 10000 0111 11112 22346788999999888 9999999999995 89999997410
Q ss_pred ------------------ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhc
Q 022256 206 ------------------EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVT 267 (300)
Q Consensus 206 ------------------~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~ 267 (300)
.+|.++|++|+|++|||+|+..+| +|+|+||+|++++|+.||++|+++|+.+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~g----------lPvGlqlig~~~~d~~LL~~A~~lE~~~ 465 (472)
T PRK07488 396 DDTVILNGAAVPTFARVIRNTDPASNAGLPGLSLPAGLTPHG----------LPVGLELDGPAGSDRRLLAIGRALERVL 465 (472)
T ss_pred cccccccccchhhhhhhhcccccccccCCCeEEEecCCCCCC----------CCeeEEEeCCCCCHHHHHHHHHHHHHhh
Confidence 146789999999999999987544 4599999999999999999999999997
Q ss_pred CC
Q 022256 268 DH 269 (300)
Q Consensus 268 ~~ 269 (300)
++
T Consensus 466 ~~ 467 (472)
T PRK07488 466 GR 467 (472)
T ss_pred CC
Confidence 65
No 17
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.4e-48 Score=362.99 Aligned_cols=251 Identities=27% Similarity=0.499 Sum_probs=184.9
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|.++.|+.+...+
T Consensus 151 ~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~ 230 (459)
T PRK00012 151 LAPAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVEDAALLLNAIAGHDPKDSTSADVPV 230 (459)
T ss_pred CCceEEeeCCCCccchhHHHcCceeecCCCCcccCCCCcCcccCCCcccCccCCHHHHHHHHHHHhCCCCCCcccccCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999988887654322
Q ss_pred --CCCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH
Q 022256 80 --FADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW 145 (300)
Q Consensus 80 --~~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (300)
+...+....+++|||++++ +++++++.|+++|++|++++++.. +.....+......+....+..+
T Consensus 231 ~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 309 (459)
T PRK00012 231 PDYTAALGKDIKGLKIGVPKEYFGEGLDPEVKEAVEAAIKKLEDLGAEIVEVSLPHT-KYALPAYYIIAPAEASSNLARY 309 (459)
T ss_pred CchhhhhcccccccEEEEEcccccccCCHHHHHHHHHHHHHHHHCCCEEEEeCCCch-HHHHHHHHHHHHHHHHHHHhhc
Confidence 2111223468899999764 246788999999999999887643 2222222112222222111111
Q ss_pred ------------------HhcCCCchhhhhhccHHHHHhhhcc-----CHHHHHHHHHHHHHHHHHHHHHcc-CcEEEec
Q 022256 146 ------------------QRSGKDDVYEAQDQWPVELRRSRII-----TAVDYMQAQRARGKLIREVKESFI-VDAFIGN 201 (300)
Q Consensus 146 ------------------~~~~~~~~~~~~~~~~~~l~~~~~~-----s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P 201 (300)
........+.+ ....++..+..+ ...+|.++++.|+++++++.++|+ +|+||+|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~P 387 (459)
T PRK00012 310 DGVRYGYRAEDAKDLEEMYEKTRSEGFGE--EVKRRIMLGTYVLSAGYYDAYYLKAQKVRTLIKQDFEKAFEKVDVILGP 387 (459)
T ss_pred ccccccccccccccHHHHHhhhhhhccCH--HHHHHHHhCcchhccccchHHHHHHHHHHHHHHHHHHHHHhcCCEEEeC
Confidence 00000000111 111233333332 234588889999999999999996 9999999
Q ss_pred CCC-------------------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHH
Q 022256 202 VTD-------------------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIA 262 (300)
Q Consensus 202 ~~~-------------------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~ 262 (300)
+.. +.||.+||++|+|++|||+|+..+| +|+||||+|++++|+.||++|++
T Consensus 388 t~~~~a~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~g----------lPvGlqlvg~~~~D~~LL~~a~~ 457 (459)
T PRK00012 388 TAPTTAFKIGEKTDDPLAMYLSDIFTVPANLAGLPAISVPAGFDDGG----------LPVGLQLIGKYFDEETLLNVAYA 457 (459)
T ss_pred CCCCCCcccccccCchHhhhccccccccccccCCCcEEEecCCCCCC----------CCEEEEEECCCCchHHHHHHHHH
Confidence 741 2367889999999999999987543 46999999999999999999999
Q ss_pred HH
Q 022256 263 YQ 264 (300)
Q Consensus 263 lE 264 (300)
+|
T Consensus 458 ~E 459 (459)
T PRK00012 458 FE 459 (459)
T ss_pred hC
Confidence 86
No 18
>PRK07139 amidase; Provisional
Probab=100.00 E-value=3.8e-48 Score=356.90 Aligned_cols=252 Identities=19% Similarity=0.326 Sum_probs=185.8
Q ss_pred cceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 022256 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPFA 81 (300)
Q Consensus 2 ~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~~ 81 (300)
+++|+|||||||||+|||||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|.|+.|+.+.+.++.
T Consensus 132 ~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~~~vl~g~d~~d~~~~~~~~~ 211 (439)
T PRK07139 132 ISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDVKIN 211 (439)
T ss_pred CCEEEEcCCCcchhhhHHHcCeEEEeCCCCCcCCCCcccCcccCCccccccCCHHHHHHHHHHHcCCCcCCccccccCcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999888776554432
Q ss_pred CCCCCCCCccEEEEecc----------hHHHHHHHHHHCCCEEEEecCCcc-hhhHHHHHhhhhchhhhhhhH-------
Q 022256 82 DPFSVDITKLTVGYLED----------AEMEVVQVLAEKGIKMVPFKLNYT-VDSVQGILNFTMDVDMLAHFD------- 143 (300)
Q Consensus 82 ~~~~~~~~~lrIg~~~~----------~~~~a~~~L~~~G~~vvev~~~~~-~~~~~~~~~~~~~~~~~~~~~------- 143 (300)
. ....+++|||+.+. +++++++.|+++|++|++++++.. .+.....+......+....+.
T Consensus 212 ~--~~~~~~lrig~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 289 (439)
T PRK07139 212 N--VKKTKPKKVAYLDCFKELEEYVAKKYKKLINILKSENIEVEKIKIDEKLLKAIKPVYKIISYSEASSNLANLNGIAF 289 (439)
T ss_pred c--ccccCCCEEEEECccccCCHHHHHHHHHHHHHHHHCCCEEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 2 23457899998642 346788999999999999887632 121111111111111111111
Q ss_pred ----------HHHhcCCCchhhhhhccHHHHHhhhccCH-----HHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCCC--
Q 022256 144 ----------EWQRSGKDDVYEAQDQWPVELRRSRIITA-----VDYMQAQRARGKLIREVKESFI-VDAFIGNVTDW-- 205 (300)
Q Consensus 144 ----------~~~~~~~~~~~~~~~~~~~~l~~~~~~s~-----~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~~-- 205 (300)
.+........+.+ ....++..+..++. .+|.++++.|++++++|.++|+ +|+||+|++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a 367 (439)
T PRK07139 290 GNREKGSSWEEIMINTRSEGFGK--MVQKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIA 367 (439)
T ss_pred ccccccccHHHHHHhcchhccCH--HHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCC
Confidence 1111001111111 11224455554443 4588999999999999999996 99999997420
Q ss_pred --------------c-cccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcC
Q 022256 206 --------------E-KVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 206 --------------~-~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
. ++.++|++|+|++|||+| ..+ |+|+|+||+|++++|+.||++|+++|++++
T Consensus 368 p~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g-~~~----------glPiGlqivg~~~~D~~LL~~A~~lE~~~~ 434 (439)
T PRK07139 368 PDIDENENKSDNYMDYILTISNLVGNPSLSIPLG-KYN----------NLPFNLAIDSKIYDDEKLLSYSLYIEELIK 434 (439)
T ss_pred CcccccccchhhhhhhcccCcccCCCCeEEEeCC-CCC----------CCCeEEEEECCCCChHHHHHHHHHHHHHhc
Confidence 1 256799999999999999 433 356999999999999999999999999875
No 19
>PRK08310 amidase; Provisional
Probab=100.00 E-value=2.6e-48 Score=354.02 Aligned_cols=239 Identities=22% Similarity=0.306 Sum_probs=184.2
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|++|+.|+.++++++|++|||||||+|+++++++|.|.++.+..
T Consensus 123 ~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~~~d~~Gp~arsv~D~~~~~~~l~g~~~~~~~------ 196 (395)
T PRK08310 123 LADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLAPSFDTVGWFARDIALLERVGEVLLGDDAQEFP------ 196 (395)
T ss_pred CcceEEecCCCCCeecchHhcCeeEeecCCCcccCCCCcccccCCCeeeeeeCCHHHHHHHHHHHcCCCcccCC------
Confidence 58999999999999999999999999999999999999999999999999999999999999999998766531
Q ss_pred CCCCCCCCCccEEEEecc-----------hHHHHHHHHHHCCCEEEEecCCc-chhhHHHHHhhhhchhhhhhhHHHHhc
Q 022256 81 ADPFSVDITKLTVGYLED-----------AEMEVVQVLAEKGIKMVPFKLNY-TVDSVQGILNFTMDVDMLAHFDEWQRS 148 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~-----------~~~~a~~~L~~~G~~vvev~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (300)
..+||++..+ +++++++.|++++.++++++.+. ..+.....+......+....+..+...
T Consensus 197 --------~~~ri~~~~~~~~~~~~~v~~a~~~a~~~L~~~~g~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (395)
T PRK08310 197 --------LTQRLLIPVDLFALLDPAVRAALEAALARLRPHLGPAKPASVPPLSLDEWYEAFRVLQAAEAWETHGAWISS 268 (395)
T ss_pred --------cCceEEEeccccccCCHHHHHHHHHHHHHHHHhCCceeeecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1246776543 35678899998644888877542 233332222222223333334333322
Q ss_pred CCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------------------Ccc
Q 022256 149 GKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD--------------------WEK 207 (300)
Q Consensus 149 ~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~--------------------~~~ 207 (300)
. ...+.+. ...+++.+..++..+|.++++.|+++++++.++|+ +|+||+|+.. +.|
T Consensus 269 ~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~ 345 (395)
T PRK08310 269 G-NPQLGPG--VADRFAAGAEVTADQVEAARARRAAFARELAALLGPDAVLLLPTVPGAAPLRGAPFEALEAYRERALRL 345 (395)
T ss_pred c-hhhcCHH--HHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCccCCCccchHHHHHHHHHhh
Confidence 1 1222222 12346678889999999999999999999999996 9999999642 136
Q ss_pred ccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhc
Q 022256 208 VCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVT 267 (300)
Q Consensus 208 t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~ 267 (300)
|.+||++|+|+++||+|.. + |+|+||||+|++++|+.||++|+++|++.
T Consensus 346 t~~~N~~G~PaisvP~g~~-~----------glPvglQivg~~~~D~~lL~~a~~le~~~ 394 (395)
T PRK08310 346 LCIAGLAGLPQISLPLASV-D----------GAPFGLSLIGPRGSDRSLLALAQTIAAAR 394 (395)
T ss_pred ceeehhcCCCeEEEECCCC-C----------CCCEEEEEECCCCCHHHHHHHHHHHHhhh
Confidence 7899999999999999853 2 35699999999999999999999999874
No 20
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=3.2e-48 Score=359.47 Aligned_cols=248 Identities=28% Similarity=0.393 Sum_probs=183.4
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+|||||||||||||+|+||+.|++++++++|++|||||||+|+++++++|.|.++.|+.+...++
T Consensus 161 ~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~~~~d~~~~~~p~ 240 (452)
T TIGR02715 161 LVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFVASLDHVGPFARSVEDLALAYDVMQGPDPQDPFCTDRPA 240 (452)
T ss_pred CCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCccccCcccCeeCCHHHHHHHHHHhcCCCCCCcccccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999888876654443
Q ss_pred CCC---CCCCCCccEEEEecch------------HHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH
Q 022256 81 ADP---FSVDITKLTVGYLEDA------------EMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW 145 (300)
Q Consensus 81 ~~~---~~~~~~~lrIg~~~~~------------~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (300)
... ...+++++||||.++. ++++++.| +.. ++++++.. +.....+......+....+..+
T Consensus 241 ~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L---~~~-~~v~~~~~-~~~~~~~~~~~~~e~~~~~~~~ 315 (452)
T TIGR02715 241 EPTVPLLPAGISGLRIAVLGGWFQQNADPEALAAVGRVAKAL---GAT-TIVELPDA-ERARAAAFVITASEGGNLHLDA 315 (452)
T ss_pred cchhhhhhcCCCCCEEEEECccccCCCCHHHHHHHHHHHHhc---CCe-eeecCCch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 221 1224678999997542 22334444 443 23444432 1111111122223333333333
Q ss_pred HhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------------------
Q 022256 146 QRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------- 204 (300)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------- 204 (300)
.... .+.+.+. ...++..+..++..+|.++++.|++++++|.++|+ +|+||+|+..
T Consensus 316 ~~~~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~ 392 (452)
T TIGR02715 316 LRTR-PQDFDPA--TRDRLLAGALLPASWYAQAQRFRHWFRDAIRELFQRVDVLIAPATPCSAPLIGQETMIIDGVPVPV 392 (452)
T ss_pred hhhc-hhhcCHH--HHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcCcccccccCccchhh
Confidence 2211 1222222 22356677788999999999999999999999996 9999999641
Q ss_pred ----CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhc
Q 022256 205 ----WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVT 267 (300)
Q Consensus 205 ----~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~ 267 (300)
+.||.+||++|+|++|||+|+. + |+|+|+||+|++++|+.||++|++||+..
T Consensus 393 ~~~~~~~t~~~nl~G~PaisvP~g~~-~----------glPvGlQivg~~~~D~~lL~~a~~le~~~ 448 (452)
T TIGR02715 393 RANLGIFTQPISFAGLPVLAAPLPRP-G----------RLPIGVQLIAAPWREDLCLRAAAVLERQG 448 (452)
T ss_pred hhhHHhcCccchhcCCCeEEEeCCCC-C----------CCCeEEEEECCCCCHHHHHHHHHHHHHhh
Confidence 0167899999999999999973 3 35699999999999999999999999853
No 21
>PRK09201 amidase; Provisional
Probab=100.00 E-value=6.1e-48 Score=358.48 Aligned_cols=249 Identities=29% Similarity=0.379 Sum_probs=185.0
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+|||||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|.++.|+.+...++
T Consensus 168 ~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~ 247 (465)
T PRK09201 168 LVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYDVLQGPDPQDPFQADRPA 247 (465)
T ss_pred CCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCcccccCcccCccCCHHHHHHHHHHhcCCCCCCcccccCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999888877655443
Q ss_pred CC---CCCCCCCccEEEEecch------------HHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH
Q 022256 81 AD---PFSVDITKLTVGYLEDA------------EMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW 145 (300)
Q Consensus 81 ~~---~~~~~~~~lrIg~~~~~------------~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (300)
.. ....+.+++||||+++. ++++++.| +.. ++++++....... .+......+....+..+
T Consensus 248 ~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L---~~~-~~v~~~~~~~~~~-~~~~~~~~e~~~~~~~~ 322 (465)
T PRK09201 248 EPTAPLLDRGAEGLRIAVLGGYFAQWADPEARAAVDRVAKAL---GAT-REVELPEAARARA-AAFIITASEGGNLHLPA 322 (465)
T ss_pred cchhhhhccCCCCCEEEEECccccCCCCHHHHHHHHHHHHHc---cCc-eeecCCchhHHHH-HHHHHHHHHHHHHHHHH
Confidence 21 11224678999997542 23344444 442 2344443222111 11122233433333333
Q ss_pred HhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------------------
Q 022256 146 QRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------- 204 (300)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------- 204 (300)
.... .+.+.+. ...++..+..++..+|.++++.|+.++++|.++|+ +|+|++|+..
T Consensus 323 ~~~~-~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~ 399 (465)
T PRK09201 323 LRTR-PQDFDPA--SRDRLLAGAMLPAAWYVQAQRFRRWFRQAVLELFEHVDVLIAPATPCSAPLIGQETMRIDGVELPV 399 (465)
T ss_pred Hhhh-hhhcCHH--HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcccccccccCcchhhh
Confidence 2211 1222222 22356778889999999999999999999999996 9999999631
Q ss_pred ----CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcC
Q 022256 205 ----WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 205 ----~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
+.||.+||++|+|++|||+|.. + |+|+|+||+|++++|+.||++|+.+|++..
T Consensus 400 ~~~~~~~t~~~nl~G~PaisvP~g~~-~----------GlPvGlQivg~~~~D~~lL~~A~~le~~~~ 456 (465)
T PRK09201 400 RANLGILTQPISFIGLPVVAVPLRTP-G----------GLPIGVQLIAAPWREDLALRAAAALEQQGV 456 (465)
T ss_pred hhhHHHhCccccccCCCeEEEeCCCC-C----------CcCeEEEEECCCCCHHHHHHHHHHHHhhCc
Confidence 1267899999999999999853 2 356999999999999999999999998753
No 22
>PRK06529 amidase; Provisional
Probab=100.00 E-value=3.4e-47 Score=355.23 Aligned_cols=254 Identities=18% Similarity=0.198 Sum_probs=186.7
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCccc-CcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKL-GPFCRSAADCTIVLDAIQGKDPDDLSSRDFP 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~-Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~ 79 (300)
++++|+|||||||||+|||||||||||||+|+||..+..+.+.+.|++ |||||||+|+++++++|+|.++.|+.+....
T Consensus 159 ~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~~~~~~~~Gpiarsv~D~a~~l~~~~g~~~~~~~~~~~~ 238 (482)
T PRK06529 159 IVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRGWQGASVHFALTKSVRDTRRLLYYLQMYQMESPFPLATL 238 (482)
T ss_pred CCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCccccccccccCCccCcHHHHHHHHHHhhCCCCCCCcccCCc
Confidence 689999999999999999999999999999999987765556666665 7999999999999999999887776543211
Q ss_pred CCCCC-CCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEec-CCcchhhHHHHHhhhhchhhhhhhHH
Q 022256 80 FADPF-SVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFK-LNYTVDSVQGILNFTMDVDMLAHFDE 144 (300)
Q Consensus 80 ~~~~~-~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (300)
..... ....+++||||+.+ +++++++.|+++|++|++++ +|...+.....+......+....+..
T Consensus 239 ~~~~~~~~~~~~lrIg~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~ev~~~p~~~~~~~~~~~~~~~~e~~~~~~~ 318 (482)
T PRK06529 239 SKESLFQSLQRPLKIAFYQRSPDGSPVSLDAAKALKQAVTFLREQGHEVVELEEFPLDMTEVMRSYYIMNSVETAAMFDD 318 (482)
T ss_pred ccchhccccCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011 11247899998753 24678899999999999996 45333322222222222333333333
Q ss_pred HHhc-CC---CchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC-----C---------
Q 022256 145 WQRS-GK---DDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-----W--------- 205 (300)
Q Consensus 145 ~~~~-~~---~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-----~--------- 205 (300)
+... .. ...+.+. ....+..+..++..+|.++++.|++++++|.++|+ +|+||+|+.. .
T Consensus 319 ~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~ 396 (482)
T PRK06529 319 IEDALGRPMTKDDMETM--TWAIYQSGQDIPAKRYSQVLQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGQLDPDSKL 396 (482)
T ss_pred HHHhcCCCCChhhcCHH--HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCCccCcccch
Confidence 3211 01 1111111 11235567788999999999999999999999996 9999998641 0
Q ss_pred ------------------------------ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHH
Q 022256 206 ------------------------------EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHI 255 (300)
Q Consensus 206 ------------------------------~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~ 255 (300)
.||.+||++|+|++|||+|+..+| +|+|+||+|++++|+.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~G----------lPvGlQlvg~~~~D~~ 466 (482)
T PRK06529 397 MANLAQAEIFSSEEQQNLVETMFEKSLAITPYTALANLTGQPAISLPTYETKEG----------LPMGVQLIAAKGREDL 466 (482)
T ss_pred hhhccccccccchhhhhhhhhhhhhhhhcccccccccccCCCeEEeecCcCCCC----------CceeEEEecCCCcHHH
Confidence 167789999999999999986544 5699999999999999
Q ss_pred HHHHHHHHHhh
Q 022256 256 ALALAIAYQSV 266 (300)
Q Consensus 256 lL~~a~~lE~~ 266 (300)
||++|+++|++
T Consensus 467 lL~~a~~le~~ 477 (482)
T PRK06529 467 LLGIAEQFEAA 477 (482)
T ss_pred HHHHHHHHHhc
Confidence 99999999987
No 23
>PRK12470 amidase; Provisional
Probab=100.00 E-value=2.8e-47 Score=353.52 Aligned_cols=255 Identities=21% Similarity=0.274 Sum_probs=185.3
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+|||||||||||||+|+||+.|+.++++++|++|||||||+|+++++++|.+.+..+. ++
T Consensus 167 ~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~ld~~Gp~ar~v~D~a~~~~vl~~~~~~~~-----~~ 241 (462)
T PRK12470 167 LAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVPGPEG-----EF 241 (462)
T ss_pred CCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCcccCccccCCeeCCHHHHHHHHHHhcCCCCCCc-----ch
Confidence 5899999999999999999999999999999999999999999999999999999999999999998654332 11
Q ss_pred CCCCCCCCCccEEEEecc---------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhhHHH
Q 022256 81 ADPFSVDITKLTVGYLED---------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHFDEW 145 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~---------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (300)
........+++||||+.+ +++++++.|+++|++|++++++.. ......+.... .........
T Consensus 242 ~~~~~~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~- 318 (462)
T PRK12470 242 VAAAAREPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGHDVVVRDPDYP-AATYANYLPRF-FRGISDDAD- 318 (462)
T ss_pred hhhhccCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhCCCEEEEeCCCch-hHHHHHHHHHH-HHHHHHhhc-
Confidence 111112346799998642 245678999999999998864321 11111010000 010000000
Q ss_pred HhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC--------------------
Q 022256 146 QRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD-------------------- 204 (300)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~-------------------- 204 (300)
.......+.+. ...++..+..++..+|.....++.+++++|.++|+ +|+|++|+..
T Consensus 319 -~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~ 395 (462)
T PRK12470 319 -AQAHPDRLEAR--TRAIARLGSFFSDRRMAALRAAEVVLSARIQSIFDDVDVVVTPGTATGPSRIGAYQRRGAVSTLLL 395 (462)
T ss_pred -cccChhhcCHH--HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCCCCCCCCCCccCCCcchhhhhh
Confidence 00011122222 22356778888888887444445589999999996 9999998641
Q ss_pred ----CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCCC
Q 022256 205 ----WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPPI 276 (300)
Q Consensus 205 ----~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~~ 276 (300)
..||.++|++|+|++|||+|+..+| +|+|+||+|++++|+.||++|+++|++.+|.++.|+.
T Consensus 396 ~~~~~~~t~~~nl~G~PaisvP~g~~~~G----------lPvGlqlvg~~~~D~~LL~~A~~le~~~~~~~~~p~~ 461 (462)
T PRK12470 396 VVQRVPYFQVWNLTGQPAAVVPWDFDGDG----------LPMSVQLVGRPYDEATLLALAAQIESARPWAHRRPPV 461 (462)
T ss_pred hhhccCcCccchhcCCCeEEEecCcCCCC----------CceEEEEECCCCcHHHHHHHHHHHHccCCccccCCCC
Confidence 0256789999999999999987654 4599999999999999999999999999886555553
No 24
>PRK06828 amidase; Provisional
Probab=100.00 E-value=6.2e-47 Score=351.86 Aligned_cols=259 Identities=19% Similarity=0.324 Sum_probs=189.4
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
++++|+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|.++.|+.+...+
T Consensus 184 ~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~ 263 (491)
T PRK06828 184 FTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVVTHKSEG 263 (491)
T ss_pred CCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCccCCCeeccccCCHHHHHHHHHHHhCCCccCccccccCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999998887654321
Q ss_pred -----CCCCCC-CCCCccEEEEecc--------------hHHHHHHHHHHCCCEEEE-ecCCcchhhHHHHHhhhhchhh
Q 022256 80 -----FADPFS-VDITKLTVGYLED--------------AEMEVVQVLAEKGIKMVP-FKLNYTVDSVQGILNFTMDVDM 138 (300)
Q Consensus 80 -----~~~~~~-~~~~~lrIg~~~~--------------~~~~a~~~L~~~G~~vve-v~~~~~~~~~~~~~~~~~~~~~ 138 (300)
+..... .+++++|||++.+ +++++++.|+++|++|++ ++++........ .....|.
T Consensus 264 ~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~p~~~~~~~~---~~~~~e~ 340 (491)
T PRK06828 264 IAEHDYTKYLDANGLNGAKIGVYNNAPKEYYESGEYDEKLFKETIEVLRSEGATVVEDIDIPSFHREWSW---GVLLYEL 340 (491)
T ss_pred CCCCchhhhhccccCCCCEEEEEcCccccccCCCHHHHHHHHHHHHHHHhcCCEEEecccCccchhHHHH---HHHHHHH
Confidence 111111 2468899999421 246788999999999988 666642221111 1111122
Q ss_pred hhhhHHHHh---cC------------------CCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHH--HHHHHHcc-
Q 022256 139 LAHFDEWQR---SG------------------KDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLI--REVKESFI- 194 (300)
Q Consensus 139 ~~~~~~~~~---~~------------------~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~--~~~~~~~~- 194 (300)
...+..+.. .. ....+.+. .....+..+..++..+|.++++.|..+. +++.++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~y~~a~~~r~~~~~~~~~~~~~~~ 419 (491)
T PRK06828 341 KHSLDNYLSKLPSTIPVHSISELMEFNENIAERALKYGQT-KLERRKDFPNTLRNPEYLNARLEDIYFSQEQGIDFALEK 419 (491)
T ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHhhhchhhhhccCHH-HHHHHHhcCCCCChHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 111111110 00 00011110 1112345567788999999998887754 68888885
Q ss_pred --CcEEEecCCCCccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCC
Q 022256 195 --VDAFIGNVTDWEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQ 272 (300)
Q Consensus 195 --~D~li~P~~~~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~ 272 (300)
+|+|++|+... ..++|++|+|++|||+|+..+| +|+|+||+|++++|..||++|+++|+++.+ ++
T Consensus 420 ~~~D~ll~Pt~~~--~~~~~~~GlPaisvP~G~~~~G----------lPvGlQlig~~~~D~~LL~~A~a~E~~~~~-r~ 486 (491)
T PRK06828 420 YNLDAILFPSYIG--STICAKAGYPSIAIPAGYMEGG----------RPFGITLASTAFSEGTLIKLAYAFEQATKH-RK 486 (491)
T ss_pred cCCCEEEeCCCCc--ccchhhcCCCeEEeecCCCCCC----------cCeEEEEECCCCCHHHHHHHHHHHHHhCCC-CC
Confidence 89999998653 3467999999999999986544 459999999999999999999999999765 44
Q ss_pred CCCC
Q 022256 273 RPPI 276 (300)
Q Consensus 273 ~p~~ 276 (300)
.|.+
T Consensus 487 ~P~~ 490 (491)
T PRK06828 487 IPGL 490 (491)
T ss_pred CCCC
Confidence 5544
No 25
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=7.1e-47 Score=345.96 Aligned_cols=237 Identities=17% Similarity=0.275 Sum_probs=180.9
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++|+|+|||||||||+||+||||||||||+|+||+.|+.|+++++|++|||||||+|+++++++|.|.+..|..
T Consensus 124 ~~p~AlGtDtgGSIRiPAa~cGvvG~KPT~G~vp~~G~~pla~sld~~G~~ar~v~D~a~~~~~l~g~~~~d~~------ 197 (422)
T PLN02722 124 LVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQSFDTVGWFARDPVILKRVGHVLLQQPDVNPI------ 197 (422)
T ss_pred CCceEeecCCCcccccChhHcceEEEecCCCccCCCCCCcccCCCCcccceeCCHHHHHHHHHHHcCCCCCCCc------
Confidence 58999999999999999999999999999999999999999999999999999999999999999998765532
Q ss_pred CCCCCCCCCccEEEEecc--------------hHHHHHHHHHHCCCEEEEecCCcchhh----HHH--------------
Q 022256 81 ADPFSVDITKLTVGYLED--------------AEMEVVQVLAEKGIKMVPFKLNYTVDS----VQG-------------- 128 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~--------------~~~~a~~~L~~~G~~vvev~~~~~~~~----~~~-------------- 128 (300)
..+||++..+ .+.++++.|+++|+.+++++++...+. +..
T Consensus 198 --------~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 269 (422)
T PLN02722 198 --------KPSQIIIAEDCFQLSSIPHDRLVQVLVKSVEKLFGGGDIVKHVNLGDYVEDKVPSLKHFMSKEIKEQEYNIP 269 (422)
T ss_pred --------CCceEEechhhhhhcccccHHHHHHHHHHHHHHhcCCCeeeecchhHHHHHhHHHHHHHhhcccccceecch
Confidence 2357776542 122466778889999987766422111 100
Q ss_pred -------HHhhhhchhhhhhhHHHHhcCCCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEe
Q 022256 129 -------ILNFTMDVDMLAHFDEWQRSGKDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIG 200 (300)
Q Consensus 129 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~ 200 (300)
.+......+....+..|.... .+.+.+ ....+++.+..++..+|.++++.|.++++++.++|+ +|+|++
T Consensus 270 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~--~v~~~~~~g~~~s~~~y~~a~~~r~~~~~~~~~~~~~~D~Ll~ 346 (422)
T PLN02722 270 SLAALSSAMRLLQRYEFKINHGEWITAV-KPEFGP--GISERIWEAVRTTEEKIDACQSVKTELRAALTTLLGEFGVLVI 346 (422)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhCCH--HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 111111122222233332221 122332 233468889999999999999999999999999997 999999
Q ss_pred cCCC--------------------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHH
Q 022256 201 NVTD--------------------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALA 260 (300)
Q Consensus 201 P~~~--------------------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a 260 (300)
|+.. +.+|.++|++|+|++|||+|+. ++ +|+||||+|++++|..||++|
T Consensus 347 Pt~p~~ap~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~g----------lPvGlqivg~~~~D~~lL~~a 415 (422)
T PLN02722 347 PTVPGPPPKLQADPTTLESFRARAFSLLSIAGVSGFCQVSIPLGLH-DN----------LPVSVSLLAKHGSDGFLLNLV 415 (422)
T ss_pred CCCCCCCCCcccCcchHHHHHHHHHHhhhcccccCCCEEEEeCCCC-CC----------CCEEEEEECCCCChHHHHHHH
Confidence 9742 1256799999999999999975 33 459999999999999999999
Q ss_pred HHHHh
Q 022256 261 IAYQS 265 (300)
Q Consensus 261 ~~lE~ 265 (300)
+.|..
T Consensus 416 ~~l~~ 420 (422)
T PLN02722 416 ESLYG 420 (422)
T ss_pred HHHHh
Confidence 99865
No 26
>PRK06707 amidase; Provisional
Probab=100.00 E-value=4.9e-46 Score=347.73 Aligned_cols=258 Identities=22% Similarity=0.426 Sum_probs=184.8
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
++++|+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|.|+.|+.+...+
T Consensus 239 ~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~slDt~Gp~artV~D~a~~l~~~~g~d~~d~~~~~~~~ 318 (536)
T PRK06707 239 FAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYDEKDVMTEKVKD 318 (536)
T ss_pred CCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCcccccCeecCeeCCHHHHHHHHHHHcCCCCCccccccccc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999887654322
Q ss_pred -----CCCCCC-CCCCccEEEEecc---------h-HHHHHHHHHHCCCEEEE-ecCCcchhhHHHHHhhhhchhhhhhh
Q 022256 80 -----FADPFS-VDITKLTVGYLED---------A-EMEVVQVLAEKGIKMVP-FKLNYTVDSVQGILNFTMDVDMLAHF 142 (300)
Q Consensus 80 -----~~~~~~-~~~~~lrIg~~~~---------~-~~~a~~~L~~~G~~vve-v~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (300)
+...+. ..++++|||++.+ + ++++++.|+++|++|++ ++++...... . .....|+...+
T Consensus 319 ~~~~~~~~~l~~~~l~~~rigv~~~~~~~~~~~~a~~~~a~~~L~~~Ga~iv~~~~l~~~~~~~---~-~~~~~e~~~~l 394 (536)
T PRK06707 319 KERIDYTKDLSIDGLKGKKIGLLFSVDQQDENRKAVAEKIRKDLQDAGAILTDYIQLNNGGVDN---L-QTLEYEFKHNV 394 (536)
T ss_pred cCCcchhhhccccCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHcCCEEEeccCCchhhHHH---H-HHHHHHHHHHH
Confidence 111111 2478899999864 2 35577899999999998 7776321111 1 11123333333
Q ss_pred HHHHhcC-------CCchhhh-hhccHHHHHhhhcc---------CHHHHH-HHHHHHHHHHHHHHHHcc---CcEEEec
Q 022256 143 DEWQRSG-------KDDVYEA-QDQWPVELRRSRII---------TAVDYM-QAQRARGKLIREVKESFI---VDAFIGN 201 (300)
Q Consensus 143 ~~~~~~~-------~~~~~~~-~~~~~~~l~~~~~~---------s~~~~~-~a~~~r~~~~~~~~~~~~---~D~li~P 201 (300)
..+.... ..+.+.. ......++..+..+ +.++|. .+++.|+.+++.+.++|+ +|+|++|
T Consensus 395 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~Dall~p 474 (536)
T PRK06707 395 NDYFSQQKNVPVKSLEEIIAFNKKDSKRRIKYGQTLIEASEKSAITKDEFEKVVQTSQENAKKELDRYLVEKGLDALVMI 474 (536)
T ss_pred HHHHhhhcCCCCCCHHHHHHhcCHHHHHHHHccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEec
Confidence 3221110 0011100 01111223333321 233443 445667788888988884 9999999
Q ss_pred CCCCccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCCCCCCC
Q 022256 202 VTDWEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHHKQRPP 275 (300)
Q Consensus 202 ~~~~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~~~~p~ 275 (300)
.. ..+.++|++|+|++|||+|+..+| +|+|+||||++++|..||++|+++|++++. +++|.
T Consensus 475 ~~--~~t~~an~aG~PaitvP~G~~~~G----------lP~Glqlig~~~~e~~LL~~A~~~E~~~~~-r~~p~ 535 (536)
T PRK06707 475 NN--EEVLLSAVAGYPELAVPAGYDNNG----------EPVGAVFVGKQFGEKELFNIGYAYEQQSKN-RKPPK 535 (536)
T ss_pred CC--CcchhhHhcCCCeEEEecccCCCC----------CCeEEEEECCCCChHHHHHHHHHHHHhCcC-CCCCC
Confidence 64 347789999999999999986544 459999999999999999999999999864 44443
No 27
>PRK07869 amidase; Provisional
Probab=100.00 E-value=9.4e-46 Score=344.58 Aligned_cols=254 Identities=17% Similarity=0.163 Sum_probs=177.3
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcC-CCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSI-SESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~-~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~ 79 (300)
++++|+|||||||||+|||||||||||||+|++|+.|+.+. ..++|++|||||||+|++++++++.|.++.+... +..
T Consensus 169 ~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~~d~~Gp~arsv~D~a~l~~v~~g~~~~~~~~-~~~ 247 (468)
T PRK07869 169 VVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPVNIVANGVLTRTVRDTAAFYREAERYYRNPKLP-PIG 247 (468)
T ss_pred CCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCccccceecCeeCcHHHHHHHHHHHhccCccCCCC-chh
Confidence 58999999999999999999999999999999999998764 4568999999999999999999999987543211 110
Q ss_pred CCCCCCCCCCccEEEEecc-------------hHHHHHHHHHHCCCEEEEecCCcchhhHHH--HHhhhhchhhhhhhHH
Q 022256 80 FADPFSVDITKLTVGYLED-------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQG--ILNFTMDVDMLAHFDE 144 (300)
Q Consensus 80 ~~~~~~~~~~~lrIg~~~~-------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 144 (300)
.. .....+++|||++.+ +++++++.|+++|++|++++++...+.... .+..............
T Consensus 248 ~~--~~~~~~~lrigv~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
T PRK07869 248 DV--TGPGKQRLRIAVVTDSVTGREADPEVREAVLATARLLEELGHRVEPVDLPVPASFVDDFLLYWGFLAFALVRGGRR 325 (468)
T ss_pred hh--cccCCCCCEEEEECCccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 00 011357899998753 245788999999999999887642111111 1111111110000000
Q ss_pred HHhcC-CCchhhhhhccHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC------------------
Q 022256 145 WQRSG-KDDVYEAQDQWPVELRRSRIITAVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD------------------ 204 (300)
Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~------------------ 204 (300)
...+. .....+.... .....+.. +..+|.++.+.|+++++++.++|+ +|+||+|+..
T Consensus 326 ~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~ 402 (468)
T PRK07869 326 TFGPSFDRTRLDNLTL--GLARHARR-NLHRLPLAIARLRRLRRVYARFFGTYDVVLTPTLAHTTPEIGYLDPTQDFDTV 402 (468)
T ss_pred hcccccCHHHhhHHHH--HHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCCCCCCCccCccccchhh
Confidence 00000 0000111100 01111222 445688888889999999999996 9999999642
Q ss_pred ------C-ccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCCC
Q 022256 205 ------W-EKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDHH 270 (300)
Q Consensus 205 ------~-~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~~ 270 (300)
| .||.++|++|+|++|||+|+..+| +|+||||+|++++|+.||++|+++|++.+|.
T Consensus 403 ~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~G----------lPvGlQivg~~~~D~~lL~~A~~le~~~~~~ 465 (468)
T PRK07869 403 LDRLISYVAFTPLQNATGEPAISLPLGQSSDG----------LPVGMMFSADVGDEATLLELAYELEEAQPWP 465 (468)
T ss_pred hHHHhcccccCccccccCCCceeeecCcCCCC----------CCeeEEEecCCCchHHHHHHHHHHHhcCCCc
Confidence 0 157789999999999999986544 4599999999999999999999999987763
No 28
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=2.3e-47 Score=354.10 Aligned_cols=244 Identities=32% Similarity=0.480 Sum_probs=173.8
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCC-
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFP- 79 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~- 79 (300)
+++||+|||||||||+||+||||||||||+|+||++|+++++.++|++|||||||+|+++++++|+|.++.|..+...+
T Consensus 143 ~~~~a~GtDtgGSiR~PAa~~Gv~GlkPT~G~vs~~G~~~~~~~~d~~GpmaRsv~Dl~~~l~vl~g~~~~d~~~~~~~~ 222 (441)
T PF01425_consen 143 FVPLAIGTDTGGSIRIPAAFCGVVGLKPTRGRVSRDGVFPLSPSFDTVGPMARSVEDLALLLDVLAGPDPWDPDSLPVPP 222 (441)
T ss_dssp SSSEEEEEESSSTTHHHHHHHTSEEEE-STTSS--TTB-CSSTTT-EEEEEESSHHHHHHHHHHHBSCBTTBTTSCSTT-
T ss_pred cccccccccccccccCchhccccceeccccccccccccccccccccccccccCcHHHHHHHHHHhcCCCccCCCcccccc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999877665432
Q ss_pred ----CCCCCCCCCCccEEEEecch-------------HHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhh
Q 022256 80 ----FADPFSVDITKLTVGYLEDA-------------EMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHF 142 (300)
Q Consensus 80 ----~~~~~~~~~~~lrIg~~~~~-------------~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (300)
+.......++++||||+.+. ++++++.|+++|++|++++++...+... .+......+....+
T Consensus 223 ~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~vv~~~~p~~~~~~~-~~~~~~~~e~~~~~ 301 (441)
T PF01425_consen 223 PPPDFDAPLPKSLKGLRIGVPRDDGQWVPVDPEVRRAFEEAAEALEAAGAEVVEVDLPDLDEAMD-AYYRIFVSEGAANL 301 (441)
T ss_dssp -SS-CSTTTTSTTTT-EEEEEGGGG-SSTSSHHHHHHHHHHHHHHHHTT-EEEEE--TTGGHHHH-HHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccccccccccccccccHHHHHHHHHHHHhhcccccccccccCchHHHHHH-HHhhhHHHHHHHHH
Confidence 22233456889999998762 4678999999999999999886544433 22222223332221
Q ss_pred ------HHHHhcCCCchhhhhhccHHHHHhhhccC-----HHHHHHHHHHHHHHHHHHHHHcc-CcEEEecCCC------
Q 022256 143 ------DEWQRSGKDDVYEAQDQWPVELRRSRIIT-----AVDYMQAQRARGKLIREVKESFI-VDAFIGNVTD------ 204 (300)
Q Consensus 143 ------~~~~~~~~~~~~~~~~~~~~~l~~~~~~s-----~~~~~~a~~~r~~~~~~~~~~~~-~D~li~P~~~------ 204 (300)
..+........+... +...+..+.... .+.|.++++.|.++++++.++|+ +|+||+|+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~ 379 (441)
T PF01425_consen 302 ARYKDFARLLAKWRDPPLSPI--VRSRLEQGAAISSAEDDSEYYLQAQRRRARLRRRFDELFEEYDALLTPTTPVPAPPI 379 (441)
T ss_dssp TTTCSHHHHHHHHHHHHSHHH--HHHHHHHHHHHHCTTTTTTHHHHHHHHHHHHHHHHHHHHHHSSEEEEESSSSS-BBT
T ss_pred hhhhHHHHhhhcccccccccc--hhhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcCCCcc
Confidence 111111011111111 111223222222 22388999999999999999997 9999999641
Q ss_pred -------------------CccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHH
Q 022256 205 -------------------WEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIAL 257 (300)
Q Consensus 205 -------------------~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL 257 (300)
..+|.++|++|+|+++||+|+..+| +|+||||+|++++|++||
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~t~~~n~~g~PaisvP~g~~~~G----------lPvGvqlvg~~~~D~~LL 441 (441)
T PF01425_consen 380 GEPSPLGPDYTALWNLLDFTAYTSPANLAGLPAISVPVGFDPDG----------LPVGVQLVGRPGSDEKLL 441 (441)
T ss_dssp TTTCCCTSCHHHHHHHHTTTTTTHHHHHHTHHEEEEEEEEETTT----------EEEEEEEEESTTBHHHHH
T ss_pred ccccccccchhhhhhhhhhhccccccccccCcceeeecCCCCCC----------cCEeEEEECCCCCccCcC
Confidence 1245789999999999999998543 579999999999999997
No 29
>PRK11910 amidase; Provisional
Probab=100.00 E-value=2e-45 Score=343.43 Aligned_cols=250 Identities=18% Similarity=0.306 Sum_probs=177.8
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
++++|+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|++.++++|.|.+..++. ..
T Consensus 330 ~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~slDtvGPmaRsV~D~a~ll~vi~g~~~~~~l----~~ 405 (615)
T PRK11910 330 FAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLTTNALTNTTSNPPL----ST 405 (615)
T ss_pred CceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCcCCCCeeccccCCHHHHHHHHHHhcCCCCcCcc----Cc
Confidence 68999999999999999999999999999999999999999999999999999999999999999997654331 11
Q ss_pred CCCCCCCCCccEEEEecc--------hHHHHHHHHHHCCCEEEE-ecCCcchhhHHHHHhhhhchhhhhhhHHHHhcCCC
Q 022256 81 ADPFSVDITKLTVGYLED--------AEMEVVQVLAEKGIKMVP-FKLNYTVDSVQGILNFTMDVDMLAHFDEWQRSGKD 151 (300)
Q Consensus 81 ~~~~~~~~~~lrIg~~~~--------~~~~a~~~L~~~G~~vve-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (300)
.+++++||||+.+ +++++++.|+++|++|++ ++++. .+.....+...+..|....+..+......
T Consensus 406 -----~~lkglRIGv~~~~~~~~v~~a~~~a~~~L~~~Ga~Vve~~~~p~-~~~~~~~~~~l~~~E~~~~l~~yl~~~~~ 479 (615)
T PRK11910 406 -----DALKGKRIGLLADGESNEETAVIKKIKLDLQKAGATIIEGIAVGE-FEQKDTDYASLLNADFKHDLNQFLQVNHS 479 (615)
T ss_pred -----ccCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCcc-HHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2468899999754 356778999999999998 45553 22222222233334444444443311100
Q ss_pred ch--hh---------h--hhccH--HHHHhhh-ccCHHHHH-HHHHHHHHHHHHHHHHc---cCcEEEecCCCCcccccc
Q 022256 152 DV--YE---------A--QDQWP--VELRRSR-IITAVDYM-QAQRARGKLIREVKESF---IVDAFIGNVTDWEKVCLG 211 (300)
Q Consensus 152 ~~--~~---------~--~~~~~--~~l~~~~-~~s~~~~~-~a~~~r~~~~~~~~~~~---~~D~li~P~~~~~~t~~~ 211 (300)
.. +. + ...+. ..+..+. ..+..++. .+++.|+.+++.+.+.| ++|+||+|+..-......
T Consensus 480 ~v~sL~dl~~fn~~~~~~~~~~gq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lDalv~P~~~~~~~~~~ 559 (615)
T PRK11910 480 PMSTLESIIQFNQTNPTRNMKYGQSELVKSQQSTITKQQADNLASNLIQSSQNELDSVLQKDKLDAVVTIGMGGSVMFLA 559 (615)
T ss_pred CCCCHHHHHHHHhcCcccccCcCHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEeCCCCCcchhhh
Confidence 00 00 0 00000 0111122 13444422 34556677778888888 499999997532222345
Q ss_pred ccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCC
Q 022256 212 NLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDH 269 (300)
Q Consensus 212 nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~ 269 (300)
+++|+|++|||+|+.... |+|+|+|++|++|+|+.||++|+++|++++.
T Consensus 560 ~~aG~PaItVP~G~~~~~---------GlPvGlqliG~~~sE~~LL~~A~a~Eq~t~~ 608 (615)
T PRK11910 560 PIAGNPELTIPAGYDEES---------NQPISLTFITARNSDKILLNMGYAYEQQSKN 608 (615)
T ss_pred hhcCCCeEEecccCCCCC---------CcCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 699999999999987532 3459999999999999999999999999875
No 30
>PRK06565 amidase; Validated
Probab=100.00 E-value=3.1e-41 Score=313.18 Aligned_cols=260 Identities=17% Similarity=0.245 Sum_probs=168.6
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCC----
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSR---- 76 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~---- 76 (300)
+++||+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|.|+.|....
T Consensus 174 ~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~s~D~vGp~aRsV~D~a~~l~vl~g~D~~d~~~~~~~~ 253 (566)
T PRK06565 174 FSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEVLDVIVADDPDTRGDLWRLQ 253 (566)
T ss_pred CCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCcccccCCCCeecceeCCHHHHHHHHHHhcCCCcccccchhhcc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999987664310
Q ss_pred ---CCC---------CCCC--CCCCCCccEEEEecc--------------------------------hHHHHHHHHHHC
Q 022256 77 ---DFP---------FADP--FSVDITKLTVGYLED--------------------------------AEMEVVQVLAEK 110 (300)
Q Consensus 77 ---~~~---------~~~~--~~~~~~~lrIg~~~~--------------------------------~~~~a~~~L~~~ 110 (300)
..+ +... ...+++++|||+... +++++++.|+++
T Consensus 254 ~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~L~~~ 333 (566)
T PRK06565 254 PWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQRIHTRPSVIDLWEAARRALEAA 333 (566)
T ss_pred ccccCccccccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHC
Confidence 000 1000 013478999999642 235689999999
Q ss_pred CCEEEEecCCcch--hh--HH--HHHh-hhhchhhh---------hhhHHHHhcCC-----------------------C
Q 022256 111 GIKMVPFKLNYTV--DS--VQ--GILN-FTMDVDML---------AHFDEWQRSGK-----------------------D 151 (300)
Q Consensus 111 G~~vvev~~~~~~--~~--~~--~~~~-~~~~~~~~---------~~~~~~~~~~~-----------------------~ 151 (300)
|++|+++++|... +. .. .+.. .....++. ..+..+++... +
T Consensus 334 Ga~vv~v~~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~yL~~~~~~~~~sl~di~~~~~~~~~~~~~~ 413 (566)
T PRK06565 334 GAEVIEVDFPLVSNCEGDRPGAPTVFNRGLVSPEFLHDELWELSGWAFDDFLRANGDPKLNRLADVDGPQIFPHDPGTLP 413 (566)
T ss_pred CCEEEEeecCCccccccccccccccccccccchhhhhccccchhHHHHHHHHHhcCCCCCCCHHHhhhhhcccCcccccc
Confidence 9999998877411 00 00 0000 00001110 01222221110 0
Q ss_pred chhhhh-hccHHHHH--hhhccC---HHHHHHHHHHHHHHHH-HHHHHc---cCcEEEecCCC-----------------
Q 022256 152 DVYEAQ-DQWPVELR--RSRIIT---AVDYMQAQRARGKLIR-EVKESF---IVDAFIGNVTD----------------- 204 (300)
Q Consensus 152 ~~~~~~-~~~~~~l~--~~~~~s---~~~~~~a~~~r~~~~~-~~~~~~---~~D~li~P~~~----------------- 204 (300)
..+... ..+....+ .....+ ..+|.+.++.++..++ .++++| ++|+|+.|...
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~lDalv~P~~~~~~~~~~~~~~~~~~~~ 493 (566)
T PRK06565 414 NREGDLAAGMDEYVNMAKRGLKSWDQIPTLPDGLRGLEKTRKLDLEDWMDGLGLDAVLFPTVADVGPADADVNPASADIA 493 (566)
T ss_pred cchhhhhhhHHHHHHHhhcCCCChhhccchHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCccccccccchhhhhc
Confidence 000000 00000011 111111 1234444444444444 344444 59999999531
Q ss_pred C------cccc-ccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHHHHHHHhhcCC
Q 022256 205 W------EKVC-LGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALALAIAYQSVTDH 269 (300)
Q Consensus 205 ~------~~t~-~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~a~~lE~~~~~ 269 (300)
| ..+. ..+.+|+|++|||+|+.++. |||+||+++|++|+|..||++|+++|++...
T Consensus 494 ~~~g~~~~ng~~a~~~~G~P~vtVP~G~~~~~---------G~PvGl~~~G~a~~e~~Ll~~A~a~E~~~~~ 556 (566)
T PRK06565 494 WSNGVWVANGNLAIRHLGVPTVTVPMGVMADI---------GMPVGLTFAGRAYDDNALLRFAAAFEATGSR 556 (566)
T ss_pred cccCcccccchhhHHhcCCCeeEeeccccCCC---------CCCeeEEeecCCcchHHHHHHHHHHHHHhcC
Confidence 1 0122 34899999999999998544 3569999999999999999999999999864
No 31
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=300.85 Aligned_cols=268 Identities=22% Similarity=0.282 Sum_probs=188.4
Q ss_pred cceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCC----CCcccCcCCCCHHHHHHHHHHHcCCC-C--CCCC
Q 022256 2 VPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISE----SLDKLGPFCRSAADCTIVLDAIQGKD-P--DDLS 74 (300)
Q Consensus 2 ~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~----~~d~~Gpmarsv~Dl~~~~~vl~g~~-~--~d~~ 74 (300)
.+||||||+|||||+||+|||++|+|||.+|+|..|+.+..+ .+-++|||+|+++|+.+++..+.|.+ + .|+.
T Consensus 216 S~lGiGsDigGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~~~i~~~~~~~~~p~ 295 (560)
T KOG1212|consen 216 SLLGIGSDIGGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLRLMIGDSGPKLLDPY 295 (560)
T ss_pred ceeccccccCCceeechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccccHHHHHHHHHHhcCCccccccCCC
Confidence 579999999999999999999999999999999999876543 36889999999999999999999965 2 4777
Q ss_pred CCCCCCCCCCCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHHhhhhchhhhhhh
Q 022256 75 SRDFPFADPFSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGILNFTMDVDMLAHF 142 (300)
Q Consensus 75 ~~~~~~~~~~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (300)
..+.++.+..+.+-++++||++.+ +..+.++.|++.|+++++++++.....+..++. .+ .+....+
T Consensus 296 ~~p~~~~~~~y~~~~~~~ig~~~~dg~~~~~pa~~RAv~~~~~~l~~~g~~~~~f~~~~~~~~~~~~~~-~~-~~~~~~~ 373 (560)
T KOG1212|consen 296 PVPVKFMEVFYKSSDKLVIGYYVDDGFFDPSPAMQRAVQETIDLLEKAGHEVVPFDLPDLKHVADMFFR-VM-PDDGDYI 373 (560)
T ss_pred CCCchhhhhhhhccCCccceEEecCCCCCcCHHHHHHHHHHHHHHHhcCcceeEecCCcchHHHHHHHH-Hc-ccccchh
Confidence 777777766666677899998743 345667778999999999998866544444333 11 1111111
Q ss_pred HH-HHhc----CCCc---hhhhhhccHH-----------HHHhhhccCHHHHHHHHHHHHHHHHHHHHHc---cCcEEEe
Q 022256 143 DE-WQRS----GKDD---VYEAQDQWPV-----------ELRRSRIITAVDYMQAQRARGKLIREVKESF---IVDAFIG 200 (300)
Q Consensus 143 ~~-~~~~----~~~~---~~~~~~~~~~-----------~l~~~~~~s~~~~~~a~~~r~~~~~~~~~~~---~~D~li~ 200 (300)
.. +... .... +.+....+.. .+.....-...+..+.+..++.++.++...+ +.|+||+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~yrlk~~~~~~~~~~dVll~ 453 (560)
T KOG1212|consen 374 SEMYLLDIGDPTLNLFVKFVELPKVFLGRSLHSYIVLPFCIMDAKNSDTAELRQNYEDIESYRLKFILYWLLGKDDVLIC 453 (560)
T ss_pred hHHhhcccCccccchheeeeeccHHHHhhhhhhhHhHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEe
Confidence 10 0000 0000 0000000000 0112223334445555666666666666555 3999999
Q ss_pred cCC---------------CCccccccccCCCCEEEecccccCCCC---------------CCCC-CCCCCcceeEEEecC
Q 022256 201 NVT---------------DWEKVCLGNLVGLPVIVVPAGFKNISN---------------PPPS-GSRRRTTITTGIYAP 249 (300)
Q Consensus 201 P~~---------------~~~~t~~~nl~g~PaisvP~g~~~~~~---------------~p~~-~~~~~~pvglqlig~ 249 (300)
|+. .+.||.+||++|+||.+||++...... -|.+ ....|||+|||+||.
T Consensus 454 Ps~~~pA~~h~~P~~~~~~~~Yt~LfN~Ld~Pag~vpvt~v~~~d~~~~~~~~~D~~~~~~~~g~~~s~GlPigVQVVa~ 533 (560)
T KOG1212|consen 454 PSFPTPAPPHNYPLLLVNGFSYTGLFNVLDFPAGVVPVTTVTQKDEKEEEYPMNDKWATKVPKGSLDSRGLPIGVQVVAN 533 (560)
T ss_pred CCCCCCCCcCCCchhhccchhHHHHHHhccCCcccccccccchhhhcccccccccHHHHhCcccccCCCCCceeEEEecC
Confidence 974 367999999999999999998765221 1223 457999999999999
Q ss_pred CCChHHHHHHHHHHHhhcC-CCC
Q 022256 250 PKHDHIALALAIAYQSVTD-HHK 271 (300)
Q Consensus 250 ~~~D~~lL~~a~~lE~~~~-~~~ 271 (300)
+++|++||++|+.+|+.++ |.+
T Consensus 534 p~~delcL~va~~lE~~~gg~~~ 556 (560)
T KOG1212|consen 534 PNQDELCLAVARELERKFGGWVR 556 (560)
T ss_pred CCchHHHHHHHHHHHHHhCCccC
Confidence 9999999999999998875 643
No 32
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-38 Score=285.76 Aligned_cols=255 Identities=29% Similarity=0.428 Sum_probs=175.7
Q ss_pred CcceeeeccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 022256 1 MVPFAIGSETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCTIVLDAIQGKDPDDLSSRDFPF 80 (300)
Q Consensus 1 ~~~~alGtD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~~~~~vl~g~~~~d~~~~~~~~ 80 (300)
+|+||+|||||||+|+||++|||+|||||+|++|+.|++|++.++|++|++||||.|...++.++.|.|..|..+...+.
T Consensus 178 l~~~alGtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~~SlD~vGi~a~tv~D~~~v~~~~~g~d~~d~~t~~~p~ 257 (506)
T KOG1211|consen 178 LCDFALGTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYDAVEVLGAIVGIDELDSTTLAQPA 257 (506)
T ss_pred cchhhccccCCCCccCcHHhcCccccccCcceecccccchhhhcccccchhhcccchhHHHhhhhcCCCccCcccccCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998887776554
Q ss_pred CCC------CCCCCCccEEEEecc------------hHHHHHHHHHHCCCEEEEecCCcchhhHHHHH--hhhhchhhhh
Q 022256 81 ADP------FSVDITKLTVGYLED------------AEMEVVQVLAEKGIKMVPFKLNYTVDSVQGIL--NFTMDVDMLA 140 (300)
Q Consensus 81 ~~~------~~~~~~~lrIg~~~~------------~~~~a~~~L~~~G~~vvev~~~~~~~~~~~~~--~~~~~~~~~~ 140 (300)
..+ ...++.++|+|+.++ .+++..++|+..|..+.++.+|.......... ..........
T Consensus 258 ~~~~~~~~~~~~~l~~~r~GIp~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~lp~~~~~~~~~~~~s~~ea~s~la 337 (506)
T KOG1211|consen 258 PFPIVLELIGSMDLSGLRIGIPKERLVQGLSSGVLSLWEELADLLGSLGAKVNEVSLPTTINGLCGYSLSSASEAASNLA 337 (506)
T ss_pred ccccchhhcccccccccccCceeecccccccHHHHHHHHHHHHHhhcccccceeeecchhhhccccccccchhhhhhhHH
Confidence 211 122578899998764 23456688888899999988875332211110 0000111111
Q ss_pred hhHHHHhcC-------CCchhhhhh--cc----HHHHHhhhcc----CHHHH-HHHHHHHHHHHHHHH---HHcc-CcEE
Q 022256 141 HFDEWQRSG-------KDDVYEAQD--QW----PVELRRSRII----TAVDY-MQAQRARGKLIREVK---ESFI-VDAF 198 (300)
Q Consensus 141 ~~~~~~~~~-------~~~~~~~~~--~~----~~~l~~~~~~----s~~~~-~~a~~~r~~~~~~~~---~~~~-~D~l 198 (300)
.+....... ...++.... .+ ..++..+..+ ...+| .++++.|+...+.+. +.++ +|.+
T Consensus 338 ryd~~~~~~r~~~~~~~~~v~~~~rs~~~n~~v~~~i~~g~~~l~~~~~~~~f~~a~~~rr~i~~~~~~~~~~~~~vD~l 417 (506)
T KOG1211|consen 338 RYDGILYGHRRDFKVADEEVYALSRSFGFNFEVKGRILSGNYILAKENDQDYFEKALEVRRLIQEDFNRRKAALEGVDYL 417 (506)
T ss_pred HHHHHHhhcchhhhhccceeeeeccccccchhhcceeeccceehhhhhhHHHHHHHHHHHHHHHHhhhhcccccccCCee
Confidence 222111100 011111100 00 0112222111 12333 444455555555555 3344 9999
Q ss_pred EecCC-------------------CCccccccccCCCCEEEecccccCCCCCCCCCCCCCcceeEEEecCCCChHHHHHH
Q 022256 199 IGNVT-------------------DWEKVCLGNLVGLPVIVVPAGFKNISNPPPSGSRRRTTITTGIYAPPKHDHIALAL 259 (300)
Q Consensus 199 i~P~~-------------------~~~~t~~~nl~g~PaisvP~g~~~~~~~p~~~~~~~~pvglqlig~~~~D~~lL~~ 259 (300)
+.|+. .+.++.++|++|+|++++|+|+..++ +|+|+|++|..++|..++++
T Consensus 418 ~~pt~~~~~~~~~~~~~~~~~~~~~~~~~~~anlaGlP~isiP~G~~~~g----------~P~glqi~g~~~~e~~~~~l 487 (506)
T KOG1211|consen 418 VTPTAPPPLYREFEKETLFAVSTLDDIFTQPANLAGLPAISIPVGLKNGG----------LPIGLQIMGGAFAEPTLIDL 487 (506)
T ss_pred eccCCCCcchhhhhhcccccccccccceeecccccCCCceEEeeeecCCC----------CceEEEeecccccchHHHHH
Confidence 99952 24567899999999999999987654 35999999999999999999
Q ss_pred HHHHHh
Q 022256 260 AIAYQS 265 (300)
Q Consensus 260 a~~lE~ 265 (300)
+.++++
T Consensus 488 ~~~~~~ 493 (506)
T KOG1211|consen 488 ALAIGQ 493 (506)
T ss_pred HHhhcc
Confidence 999988
No 33
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=70.77 E-value=16 Score=33.93 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=26.5
Q ss_pred CCccEEEEecch-----HHHHHHHHHHCCCEEEEecC
Q 022256 88 ITKLTVGYLEDA-----EMEVVQVLAEKGIKMVPFKL 119 (300)
Q Consensus 88 ~~~lrIg~~~~~-----~~~a~~~L~~~G~~vvev~~ 119 (300)
..+.||++-.|. .++.++.|+++|++++.+++
T Consensus 243 ~~~~rIAVA~D~AF~FyY~~nl~~Lr~~GAelv~FSP 279 (451)
T COG1797 243 PLGVRIAVARDAAFNFYYPENLELLREAGAELVFFSP 279 (451)
T ss_pred CcCceEEEEecchhccccHHHHHHHHHCCCEEEEeCC
Confidence 455899998773 37899999999999999874
No 34
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=66.28 E-value=9.6 Score=26.42 Aligned_cols=28 Identities=25% Similarity=0.285 Sum_probs=21.4
Q ss_pred cEEEEecchHHHHHHHHHHCCCEEEEecC
Q 022256 91 LTVGYLEDAEMEVVQVLAEKGIKMVPFKL 119 (300)
Q Consensus 91 lrIg~~~~~~~~a~~~L~~~G~~vvev~~ 119 (300)
.|||+-. .+..+.+.|++.|++|++++-
T Consensus 2 kkIAVE~-~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 2 KKIAVEE-GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CeEEecC-CchHHHHHHHHCCCEEEecCC
Confidence 3777743 446788999999999998763
No 35
>PRK03094 hypothetical protein; Provisional
Probab=58.31 E-value=17 Score=25.20 Aligned_cols=27 Identities=26% Similarity=0.434 Sum_probs=20.9
Q ss_pred EEEEecchHHHHHHHHHHCCCEEEEecC
Q 022256 92 TVGYLEDAEMEVVQVLAEKGIKMVPFKL 119 (300)
Q Consensus 92 rIg~~~~~~~~a~~~L~~~G~~vvev~~ 119 (300)
|||+-.. ...+.+.|++.|++|++++-
T Consensus 3 kIaVE~~-Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 3 KIGVEQS-LTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred eEEeecC-cHHHHHHHHHCCCEEEecCc
Confidence 6787443 45588999999999998754
No 36
>KOG4106 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.08 E-value=18 Score=26.45 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 022256 278 NLGPNDIIPDPPTVTIPP 295 (300)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ 295 (300)
.--|+..+||+.++|||-
T Consensus 43 awHP~~~~PYEhTkPip~ 60 (125)
T KOG4106|consen 43 AWHPPQHFPYEHTKPIPL 60 (125)
T ss_pred EecCCCCCCcccCCCCCC
Confidence 345788899999999984
No 37
>COG1049 AcnB Aconitase B [Energy production and conversion]
Probab=39.93 E-value=13 Score=35.85 Aligned_cols=37 Identities=32% Similarity=0.525 Sum_probs=25.6
Q ss_pred ccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCC-HHHHH
Q 022256 20 RCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRS-AADCT 59 (300)
Q Consensus 20 ~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmars-v~Dl~ 59 (300)
.||+-|+||-...-|. ...-.|.|+.|||+|+ +.|++
T Consensus 383 AcGv~girpGtycepk---mttVGSQDTTGpMTrdElk~lA 420 (852)
T COG1049 383 ACGVPGIRPGTYCEPK---MTTVGSQDTTGPMTRDELKDLA 420 (852)
T ss_pred ccCCccccCCCcccce---eeeeccccCCCCccHHHHHHHH
Confidence 6999999886654443 2233689999999986 44544
No 38
>PF03612 EIIBC-GUT_N: Sorbitol phosphotransferase enzyme II N-terminus; InterPro: IPR011618 Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria. Escherichia coli consists of IIA protein, a IIC protein and a IIBC protein. This entry represents the N-terminal conserved region of the IIBC component.; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=37.52 E-value=15 Score=29.61 Aligned_cols=39 Identities=15% Similarity=0.457 Sum_probs=28.5
Q ss_pred ccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHHH
Q 022256 8 SETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADCT 59 (300)
Q Consensus 8 tD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl~ 59 (300)
-|-||.+| ||+|=-| +||+-.+.|..+| ||||+-+..=.
T Consensus 68 IDCGGTlR-----CGiYPkK----~IpTINi~ptGkS----GPLAkfItEdi 106 (183)
T PF03612_consen 68 IDCGGTLR-----CGIYPKK----RIPTINIHPTGKS----GPLAKFITEDI 106 (183)
T ss_pred EecCCcee-----ecccccc----CCceeeeeeCCCC----cchHhhccccc
Confidence 58889877 8999776 7777777776664 88887665433
No 39
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=37.39 E-value=32 Score=25.74 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHCCCEEE
Q 022256 99 AEMEVVQVLAEKGIKMV 115 (300)
Q Consensus 99 ~~~~a~~~L~~~G~~vv 115 (300)
..++|+++|+++||+|.
T Consensus 111 dLekAv~~L~eaGhev~ 127 (128)
T COG3603 111 DLEKAVKALEEAGHEVL 127 (128)
T ss_pred hHHHHHHHHHHcCCccc
Confidence 46789999999999975
No 40
>TIGR00825 EIIBC-GUT PTS system, glucitol/sorbitol-specific, IIBC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria.E. coli consists of IIA protein, a IIC protein and a IIBC protein. This family is specific for the IIBC component.
Probab=36.24 E-value=14 Score=32.13 Aligned_cols=38 Identities=21% Similarity=0.512 Sum_probs=28.7
Q ss_pred ccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCH-HHH
Q 022256 8 SETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSA-ADC 58 (300)
Q Consensus 8 tD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv-~Dl 58 (300)
.|.||.+| ||+|=-| +||+-++.|..+| ||+|+.+ +|+
T Consensus 68 IDCGGTlR-----CGiYPkK----~IpTINi~ptgkS----GPLA~fI~Edi 106 (331)
T TIGR00825 68 IDCGGTLR-----CGIYPKR----RIPTINIHPTGKS----GPLAQFITEDI 106 (331)
T ss_pred EecCCeee-----ecccccC----CCceeeeccCCCC----chhhhHhcccc
Confidence 58899887 8998766 6777777776654 8998887 554
No 41
>PRK09273 hypothetical protein; Provisional
Probab=27.65 E-value=1e+02 Score=25.66 Aligned_cols=29 Identities=10% Similarity=0.310 Sum_probs=21.8
Q ss_pred cEEEEecc---------hHHHHHHHHHHCCCEEEEecC
Q 022256 91 LTVGYLED---------AEMEVVQVLAEKGIKMVPFKL 119 (300)
Q Consensus 91 lrIg~~~~---------~~~~a~~~L~~~G~~vvev~~ 119 (300)
+||++..+ ..++..+.|++.||+|+++-.
T Consensus 1 mkiali~e~sqa~kn~~i~~~L~~~L~~~G~eV~D~G~ 38 (211)
T PRK09273 1 MKIALINENSQAAKNAIIYEALKKVADPKGHEVFNYGM 38 (211)
T ss_pred CeEEeecccchhhhhHHHHHHHHHHHHHCCCEEEEeCC
Confidence 47777665 245678899999999998753
No 42
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=27.34 E-value=1.1e+02 Score=25.23 Aligned_cols=30 Identities=30% Similarity=0.359 Sum_probs=24.7
Q ss_pred CccEEEEecc------hHHHHHHHHHHCCCEEEEec
Q 022256 89 TKLTVGYLED------AEMEVVQVLAEKGIKMVPFK 118 (300)
Q Consensus 89 ~~lrIg~~~~------~~~~a~~~L~~~G~~vvev~ 118 (300)
++.|+-+.+| ...++++.++++|.+|+.+-
T Consensus 111 ~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V~gv~ 146 (201)
T COG0461 111 KGEKVVVVEDVITTGGSILEAVEALREAGAEVVGVA 146 (201)
T ss_pred CCCEEEEEEecccCCHhHHHHHHHHHHcCCeEEEEE
Confidence 6778888887 35789999999999998753
No 43
>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A.
Probab=22.91 E-value=1e+02 Score=22.08 Aligned_cols=24 Identities=13% Similarity=0.308 Sum_probs=18.0
Q ss_pred EEEecchHHHHHHHHHHCCCEEEE
Q 022256 93 VGYLEDAEMEVVQVLAEKGIKMVP 116 (300)
Q Consensus 93 Ig~~~~~~~~a~~~L~~~G~~vve 116 (300)
|++..+..+++++.|+++|+++..
T Consensus 72 ia~~v~D~d~~~~~l~~~G~~~~~ 95 (109)
T PF13669_consen 72 IAFEVDDLDAAIARLEAQGFRVLD 95 (109)
T ss_dssp EEEEESHHHHHHHHHHHTTECEEE
T ss_pred EEEEeCCHHHHHHHHHHCCCEEcc
Confidence 455556678888888888888764
No 44
>COG3732 SrlE Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]
Probab=21.94 E-value=38 Score=29.10 Aligned_cols=38 Identities=16% Similarity=0.461 Sum_probs=28.1
Q ss_pred ccCCCcccccccccCceeecCCCCCCCCCCCCcCCCCCcccCcCCCCHHHH
Q 022256 8 SETAGSMTYPGARCGVTALRPTFGTVGRTGVMSISESLDKLGPFCRSAADC 58 (300)
Q Consensus 8 tD~gGSiR~PAa~~Gv~G~kPT~g~is~~G~~~~~~~~d~~Gpmarsv~Dl 58 (300)
.|.||+.| ||+|=-| |||+-.+.|.++ .||+|+-+..=
T Consensus 69 idCgGt~R-----cGvYP~k----ripTini~~t~~----sGPLaq~I~Ed 106 (328)
T COG3732 69 IDCGGTLR-----CGVYPKK----RIPTINILPTGK----SGPLAQFIVED 106 (328)
T ss_pred EecCCeee-----ecccccc----CCceeeeccCCC----CchHHHHhhhh
Confidence 58888876 8999777 788877777665 48888765443
No 45
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=21.27 E-value=65 Score=22.27 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=21.5
Q ss_pred EEEEecchHHHHHHHHHHCCCEEEEe
Q 022256 92 TVGYLEDAEMEVVQVLAEKGIKMVPF 117 (300)
Q Consensus 92 rIg~~~~~~~~a~~~L~~~G~~vvev 117 (300)
.+|+...+..+.++.|++.|++|..+
T Consensus 28 ~LgiSRtaVwK~Iq~Lr~~G~~I~s~ 53 (79)
T COG1654 28 ELGISRTAVWKHIQQLREEGVDIESV 53 (79)
T ss_pred HHCccHHHHHHHHHHHHHhCCceEec
Confidence 45677778889999999999998754
No 46
>COG1875 NYN ribonuclease and ATPase of PhoH family domains [General function prediction only]
Probab=20.28 E-value=1.1e+02 Score=28.15 Aligned_cols=25 Identities=20% Similarity=0.216 Sum_probs=23.2
Q ss_pred EEEecCCCChHHHHHHHHHHHhhcC
Q 022256 244 TGIYAPPKHDHIALALAIAYQSVTD 268 (300)
Q Consensus 244 lqlig~~~~D~~lL~~a~~lE~~~~ 268 (300)
|.++|..|.-..+|++|+.+|+++.
T Consensus 248 V~L~G~AGtGKTlLALaAgleqv~e 272 (436)
T COG1875 248 VSLGGKAGTGKTLLALAAGLEQVLE 272 (436)
T ss_pred EEeeccCCccHhHHHHHHHHHHHHH
Confidence 5689999999999999999999986
Done!