Query 022262
Match_columns 300
No_of_seqs 215 out of 1672
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:33:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a9d_A Sulfite oxidase; molybd 100.0 1.6E-85 5.5E-90 631.0 27.3 284 1-297 87-372 (372)
2 1ogp_A Sulfite oxidase; oxidor 100.0 1.9E-85 6.6E-90 634.4 26.6 300 1-300 94-393 (393)
3 1sox_A Sulfite oxidase; oxidor 100.0 2E-83 6.9E-88 632.4 28.3 284 1-297 181-466 (466)
4 2blf_A SORA, sulfite\:cytochro 100.0 6.2E-81 2.1E-85 599.4 26.3 271 1-296 100-373 (373)
5 2bii_A Nitrate reductase [NADP 100.0 5.6E-81 1.9E-85 607.0 23.6 283 1-296 75-380 (424)
6 2bih_A Nitrate reductase [NADP 100.0 4E-80 1.4E-84 606.9 24.3 283 1-296 125-430 (474)
7 2xts_A Sulfite dehydrogenase; 100.0 8.1E-72 2.8E-76 538.0 18.1 258 1-295 116-380 (390)
8 1xdy_A Bacterial sulfite oxida 100.0 5.6E-38 1.9E-42 292.2 -1.4 172 31-219 109-291 (298)
9 3pe9_A Fibronectin(III)-like m 99.1 7.7E-11 2.6E-15 92.6 7.6 75 176-272 3-79 (98)
10 3pdd_A Glycoside hydrolase, fa 98.0 8.3E-06 2.8E-10 70.8 6.9 74 176-272 3-79 (190)
11 3pdd_A Glycoside hydrolase, fa 97.6 0.00032 1.1E-08 60.7 9.3 78 172-271 91-170 (190)
12 4fj6_A Glycoside hydrolase fam 63.9 9.3 0.00032 37.6 5.8 65 207-272 401-474 (523)
13 4fj6_A Glycoside hydrolase fam 63.4 8.3 0.00028 37.9 5.4 50 175-224 322-371 (523)
14 1ms9_A Trans-sialidase; trans- 61.6 38 0.0013 34.3 9.9 54 173-226 186-239 (648)
15 1w0p_A Sialidase; hydrolase, n 60.0 11 0.00037 39.0 5.8 51 173-224 541-600 (781)
16 3a72_A EXO-arabinanase; arabin 56.1 20 0.00067 33.3 6.3 38 186-223 95-133 (355)
17 3tp4_A Computational design of 52.6 63 0.0021 31.5 9.4 78 172-269 372-458 (475)
18 1so7_A Sialidase 2; neuraminid 51.9 26 0.00088 32.1 6.4 49 175-223 158-213 (382)
19 3a72_A EXO-arabinanase; arabin 51.3 17 0.00057 33.7 5.0 21 202-222 48-68 (355)
20 2ydt_A EXO-1,5-alpha-L-arabino 48.9 19 0.00064 33.6 5.0 21 202-222 53-73 (367)
21 2ydt_A EXO-1,5-alpha-L-arabino 47.9 31 0.0011 32.1 6.3 38 186-223 100-138 (367)
22 1v8h_A Sulfur oxidation protei 37.6 92 0.0032 23.8 6.6 55 203-271 45-99 (107)
23 2oxg_Z SOXZ protein; immunoglo 37.4 85 0.0029 24.0 6.3 55 203-271 46-100 (108)
24 2ddu_A Reelin; beta-jelly-roll 36.7 36 0.0012 32.2 4.8 65 206-271 101-181 (387)
25 2kbg_A N-CAM 2, neural cell ad 36.6 32 0.0011 26.3 3.8 21 253-273 74-94 (114)
26 2yuw_A Myosin binding protein 35.7 47 0.0016 23.9 4.5 20 253-272 75-94 (110)
27 4eib_A Glucoamylase; beta barr 35.6 33 0.0011 26.7 3.6 58 188-261 42-105 (109)
28 1n10_A PHL P I, pollen allerge 34.5 77 0.0026 27.9 6.3 48 204-269 173-221 (241)
29 3sil_A Sialidase; glycosidase, 33.8 54 0.0018 30.7 5.5 50 174-224 169-221 (379)
30 1x5y_A Myosin binding protein 32.3 59 0.002 23.5 4.6 21 253-273 76-96 (111)
31 1ms9_A Trans-sialidase; trans- 30.2 88 0.003 31.6 6.7 18 206-223 265-282 (648)
32 2w20_A Sialidase A; secreted, 28.7 36 0.0012 32.5 3.4 46 179-224 249-302 (471)
33 1w8o_A Bacterial sialidase; 3D 28.6 70 0.0024 31.0 5.6 20 204-223 188-207 (601)
34 1bpv_A Titin, A71, connectin; 28.0 67 0.0023 23.9 4.3 19 253-271 78-97 (112)
35 3f6k_A Sortilin; protein sorti 27.7 52 0.0018 33.5 4.5 24 203-226 465-488 (685)
36 2bf6_A Sialidase, EXO-alpha-si 27.6 63 0.0021 30.5 4.9 35 189-223 236-270 (449)
37 1pmh_X Cscbm27-1, beta-1,4-man 27.0 45 0.0015 28.3 3.3 24 202-225 44-67 (185)
38 2sli_A Intramolecular trans-si 25.6 91 0.0031 31.5 5.9 47 175-224 456-506 (679)
39 2uur_A Collagen alpha-1(IX) ch 22.2 1E+02 0.0034 26.9 4.8 40 255-298 127-167 (245)
40 2c9r_A COPC, copper resistance 22.1 2.3E+02 0.008 21.1 6.3 73 178-269 7-92 (102)
41 2xbg_A YCF48-like protein; pho 21.8 3.4E+02 0.012 23.6 8.5 17 208-224 144-160 (327)
42 1w8o_A Bacterial sialidase; 3D 21.4 72 0.0025 30.9 4.1 20 204-223 236-255 (601)
43 4a41_A GH89_CBM32-5, alpha-N-a 20.5 1.3E+02 0.0044 23.9 4.9 32 190-222 80-117 (161)
No 1
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=100.00 E-value=1.6e-85 Score=631.04 Aligned_cols=284 Identities=49% Similarity=0.886 Sum_probs=258.2
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|||+||||++|++.+++.|.+|+.++|++++|+||+|+|||++||++.+. .+++||.|+|+|.. .++.+|.+
T Consensus 87 ~~l~C~gN~r~~~~~~~~v~G~~w~~gav~~~~W~GV~L~dlL~~ag~~~~~----~~a~~V~~~~~D~~--~~~~~Y~~ 160 (372)
T 2a9d_A 87 ATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEEL----QGEWHVCFEGLDAD--PGGAPYGA 160 (372)
T ss_dssp EEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCC----SSCCEEEEEEEEEC--TTCCEEEE
T ss_pred EEEEecCCchhhccccccccccccccCceecceEEeEEHHHHHHhcCCCcCC----CCcEEEEEEecCCC--CCCCCeEE
Confidence 3699999999999888999999999999999999999999999999997321 25899999999832 22336999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||+|.+++||||+||||||+++|||||||||||+||++|||||++|+|+++++++|||+++|+.++|..+.++.
T Consensus 161 sipl~~a~dp~~d~lLA~~mNGepL~~~hG~PlRlVvPg~~G~ksvKwl~~I~v~~~~~~~~w~~~~Y~~~~p~~~~~~~ 240 (372)
T 2a9d_A 161 SIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWDTV 240 (372)
T ss_dssp EEEHHHHHCGGGCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSCCCCTTCCTTTC
T ss_pred EeEHHHHhCCCCCEEEEECCCCeECCcccCceEEEEecchhheeecceeeEEEEeccCCCCcceecceeEcCCCCCcccc
Confidence 99999999865589999999999999999999999999999999999999999999999999999999999998877777
Q ss_pred CCCCCCCccceeceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCc
Q 022262 161 NWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDK 240 (300)
Q Consensus 161 ~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~ 240 (300)
+|...++|++|++||+|+.|.++++|+.|+++|+||||||||++|+|||||+|||+||++|+|..++. ...++
T Consensus 241 ~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~-------~~~~~ 313 (372)
T 2a9d_A 241 DYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKA-------PPGRA 313 (372)
T ss_dssp CGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBSSSSCEECEECSCCC-------CTTCC
T ss_pred ccccCcccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeEcCCccc-------ccCCc
Confidence 78778899999999999999999999999999999999988899999999999999999999987642 12358
Q ss_pred eeeEEeEEEEECC-C-ccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEec
Q 022262 241 WAWVFFEVIIDIP-H-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 297 (300)
Q Consensus 241 ~aW~~W~~~~~~~-~-~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~~ 297 (300)
|||++|+++|++. + .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 314 ~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 372 (372)
T 2a9d_A 314 WAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 372 (372)
T ss_dssp CSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred cEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 9999999999884 4 5799999999999999998777899999999999999999964
No 2
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=100.00 E-value=1.9e-85 Score=634.45 Aligned_cols=300 Identities=79% Similarity=1.326 Sum_probs=259.4
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|+|+||||++|++.+++.|.+|+.++|++++|+||+|+|||++||++.++.....+.+||.|+|+|.....++.+|.+
T Consensus 94 ~~l~C~gN~r~~~~~~~~~~G~~W~~gai~~a~W~GV~L~dlL~~aG~~~~a~~~~~~~~~V~f~g~D~~~~~~~~~Y~~ 173 (393)
T 1ogp_A 94 ATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKA 173 (393)
T ss_dssp EEEECTTTTHHHHHHHSCCCSCCCCSCCEEEEEEEEEEHHHHHHTTTCCTTCSCCTTCCCEEEEEESCCCGGGTTCCCEE
T ss_pred EEEEecCCccccccccccccCccccccceecceEEeeEHHHHHHhcCCCcccccccCcceEEEEEEcCcccccCCCCeEE
Confidence 36999999999998889999999999999999999999999999999985421111233799999999654444458999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||++.+++||||+||||||+++|||||||||||+||++|||||++|+|+++++++|||+++|+++|++.+++..
T Consensus 174 sipl~~al~~~~~vlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwL~~I~v~~~~~~~~w~~~~Y~~~p~~~~~~~~ 253 (393)
T 1ogp_A 174 SITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDYKMFPPSVNWDNI 253 (393)
T ss_dssp EEEHHHHHCGGGCCEEEEEETTEECCTTTTTTCEEECTTSCGGGSCCSEEEEEEESSCCCCHHHHSSSCCCCTTCCTTTC
T ss_pred EeEHHHHhCCCCCEEEEeCcCCeECCcccCceEEEEeCccccceeeeeccEEEEEecCCCCcceeccccccCCCCCcccc
Confidence 99999999864479999999999999999999999999999999999999999999999999999999999888876666
Q ss_pred CCCCCCCccceeceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCc
Q 022262 161 NWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDK 240 (300)
Q Consensus 161 ~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~ 240 (300)
.+.+..+|++|++||+|+.|.++++|+.|.|+|+||||||||++|+|||||+|||+||++|+|..++..++.....+..+
T Consensus 254 ~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~ 333 (393)
T 1ogp_A 254 NWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERVDISLDGGKNWVEASRTQEPGKQYISEHSSSDK 333 (393)
T ss_dssp CGGGSCCCCSCCCEEEECSSCSEEEECSEEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEESSSSSCCCSSSTTSCT
T ss_pred cCCCCceeeeecccEEEeCCCCCCEecCCcEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeeccCcCccccccccccCCC
Confidence 66667799999999999999999999999999999999988899999999999999999999987431111111123458
Q ss_pred eeeEEeEEEEECCCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEeccCC
Q 022262 241 WAWVFFEVIIDIPHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGHSNM 300 (300)
Q Consensus 241 ~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~~~~~ 300 (300)
|||++|+++|++.+.++|+|||||++||+||+....+||++||+||+||||+|+|.+|++
T Consensus 334 ~aW~~W~~~~~~~~~~~i~vRA~D~~gn~QP~~~~~~wN~~G~~~N~~~~v~v~~~~~~~ 393 (393)
T 1ogp_A 334 WAWVLFEATIDVSQTTEVIAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLGHSNL 393 (393)
T ss_dssp TSCEEEEEEEEESSCEEEEEEEEETTCCBCCSCHHHHCCTTCCCCCCCEEEEEEEC----
T ss_pred CEEEEEEEEEecCCCeEEEEEEEcCCCCcCCCCccCcccCCCcccCCEEEEEEECCCCCC
Confidence 999999999998557799999999999999998556799999999999999999988875
No 3
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=100.00 E-value=2e-83 Score=632.43 Aligned_cols=284 Identities=49% Similarity=0.886 Sum_probs=258.6
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|||+||||++|+..+++.|.+|+.++|++++|+||+|+|||++||++... .++++|.|+|+|... ++.+|.+
T Consensus 181 ~~l~C~gN~r~~~~~~~~v~G~~W~~gai~~~~W~Gv~L~dlL~~ag~~~~~----~~a~~V~~~~~D~~~--~~~~Y~~ 254 (466)
T 1sox_A 181 ATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGARLRDVLLHAGFPEEL----QGEWHVCFEGLDADP--GGAPYGA 254 (466)
T ss_dssp EEEECTTTTHHHHHTTSCCSSCCCCTTSEEEEEEEEEEHHHHHHHTTCCSCC----SSCCEEEEEEEEECT--TCCEEEE
T ss_pred EEEEecCCCcccccccccccccccccCceecceEEEEEHHHHHHHcCCCCCC----CCcEEEEEEecCCCC--CCCCEEE
Confidence 3699999999999888999999999999999999999999999999997321 258999999998422 2336999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||++++++||||+||||||+++|||||||||||+||++|||||++|+|+++++++|||+++|+.++|..+.++.
T Consensus 255 sipl~~a~~p~~~~lLA~~mNGepL~~~hG~PlRlvvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~~~p~~~~~~~ 334 (466)
T 1sox_A 255 SIPYGRALSPAADVLLAYEMNGTELPRDHGFPVRVVVPGVVGARSVKWLRRVAVSPDESPSHWQQNDYKGFSPCVDWDTV 334 (466)
T ss_dssp EEEHHHHHCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCSHHHHSSSCCCCTTCCTTTC
T ss_pred EeEHHHHhCCCCCEEEEECcCCeECChhcCceEEEEecchhheeeeeeccEEEEEeCCCCCcceecCceecCCCCCcccc
Confidence 99999999875689999999999999999999999999999999999999999999999999999999999998877777
Q ss_pred CCCCCCCccceeceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCc
Q 022262 161 NWKSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDK 240 (300)
Q Consensus 161 ~~~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~ 240 (300)
+|...++|++|++||+|+.|.++++|+.|+++|+||||||||++|+|||||+|||+||++|+|..++. ...++
T Consensus 335 ~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~sggg~~I~rVEVS~DgG~tW~~A~l~~~~~-------~~~~~ 407 (466)
T 1sox_A 335 DYRTAPAIQELPVQSAVTQPRPGAAVPPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKVARLMGDKA-------PPGRA 407 (466)
T ss_dssp CGGGSCCCCBCCCEEEEEESCTTCEECSEEEEEEEEEECSTTCCEEEEEEESBTTSSCEECEECSCCC-------CTTCC
T ss_pred ccccccccccccccEEEecCCCCCEeccceEEEEEEEEcCCCCCEEEEEEEcCCCCcceEeecCCccc-------ccCCc
Confidence 78778899999999999999999999999999999999988999999999999999999999987642 12358
Q ss_pred eeeEEeEEEEECC-C-ccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEec
Q 022262 241 WAWVFFEVIIDIP-H-STQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVGH 297 (300)
Q Consensus 241 ~aW~~W~~~~~~~-~-~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~~ 297 (300)
|||++|+++|++. + .++|+|||||++||+||+....+||++||+||+||+|+|+|.+
T Consensus 408 ~~W~~W~~~~~~~~g~~~~i~~RA~D~~g~~QP~~~~~~wn~~G~~~n~~~~v~v~v~~ 466 (466)
T 1sox_A 408 WAWALWELTVPVEAGTELEIVCKAVDSSYNVQPDSVAPIWNLRGVLSTAWHRVRVSVQD 466 (466)
T ss_dssp CSCEEEEEEEEECTTCEEEEEEEEEETTCCBCCSCSGGGCCTTCCCCCSCEEEEEEECC
T ss_pred cEEEEEEEeEEcCCCCEEEEEEEEEcCCCCcCCCCccCCcCCCCcccceEEEEEEEEeC
Confidence 9999999999884 4 5799999999999999998777899999999999999999863
No 4
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=100.00 E-value=6.2e-81 Score=599.39 Aligned_cols=271 Identities=30% Similarity=0.534 Sum_probs=240.4
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|+|+||||++|. +++.|.+|+.|+|++++|+||+|+|||++||+++ ++++|.|+|+|.....+...|.+
T Consensus 100 ~~l~C~~N~R~~~~--~~~~G~~W~~gai~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~D~~~~~~~~~Y~~ 170 (373)
T 2blf_A 100 AVNQCSGNSRGFVE--PRVGGGQLANGAMGNARWRGVPLKAVLEKAGVQA-------GAKQVTFGGLDGPVIPETPDFVK 170 (373)
T ss_dssp EEEECTTTTGGGCS--SCCSSCCCCSCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESCBCSSTTSCCCEE
T ss_pred EEEEeccCcccccc--ccccCCCccccceeeeEEEEEEHHHHHHhcCCCC-------CCcEEEEEecCCCCCCCCCCEEE
Confidence 36999999999994 8899999999999999999999999999999984 58999999999432222224999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||++ ++||||+||||||+++||||||||+||+||++|||||++|+|+++++++|||+++|+++.........
T Consensus 171 sipl~~a~~~--~~lLA~~mNGepL~~~hG~PlRlVvPg~~G~~svKwl~~I~v~~~~~~~~w~~~~Y~~p~~~~~~~~~ 248 (373)
T 2blf_A 171 ALSIDHATDG--EVMLAYSMNGADLPWLNGYPLRLVVPGYYGTYWVKHLNEITVIDKEFDGFWMKTAYRIPDNACACTEP 248 (373)
T ss_dssp EEEHHHHTSS--CSEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCHHHHTSSEEESSTTCCCST
T ss_pred EEEHHHhcCC--CEEEEEeeCCeECCcccCCceEEEecCccccccceeccEEEEEecCCCCcceecccccCCccccccCC
Confidence 9999999986 89999999999999999999999999999999999999999999999999999999984221111122
Q ss_pred CC--CCCCCccceeceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCC
Q 022262 161 NW--KSRRPLMDFPVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSS 238 (300)
Q Consensus 161 ~~--~~~~~i~~~~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~ 238 (300)
+| .+..+|++|++||+|+.|.++++|+.|+++|+||||+ ||++|+|||||+|||+||++|+|..+.+
T Consensus 249 ~~~~~~~~~i~~~~v~S~I~~P~~~~~v~~g~~~v~G~A~~-Gg~~I~rVEVS~DgG~tW~~A~l~~~~~---------- 317 (373)
T 2blf_A 249 GKAPTATIPINRFDVRSFITNVENGASVKAGEVPLRGIAFD-GGYGITQVSVSADAGKSWTNATLDPGLG---------- 317 (373)
T ss_dssp TCCCSSEEECCBCCCEEEECSCCTTEEECSEEEEEEEEEEC-SSSCEEEEEEESSTTSSCEECEECCCSC----------
T ss_pred CCcccccccceecccCEEEEecCCCCEeccceEEEEEEEEc-CCCCEEEEEEEeCCCCCceEeEeCCCCC----------
Confidence 33 3456799999999999999999999899999999995 5789999999999999999999986643
Q ss_pred CceeeEEeEEEEEC-CCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 022262 239 DKWAWVFFEVIIDI-PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 296 (300)
Q Consensus 239 ~~~aW~~W~~~~~~-~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~ 296 (300)
+|||++|+++|++ ++.++|+|||||++||+||+... ||++||+||+||+|+|+|.
T Consensus 318 -~~~W~~W~~~~~~~~g~~~i~~RA~D~~g~~QP~~~~--wn~~G~~~N~~~~v~v~v~ 373 (373)
T 2blf_A 318 -KYSFRGWKAVLPLTKGDHVLMCRATNARGETQPMQAT--WNPAGYMRNVVEATRVIAA 373 (373)
T ss_dssp -TTSCEEEEEEEEECSEEEEEEEEEEETTSCCCCSSCC--CCTTCCCCCCCEEEEEEEC
T ss_pred -CCeEEEEEEEEEcCCCcEEEEEEEEcCCCCcCCCccc--ccccccccCcEEEEEEEEC
Confidence 8999999999987 45679999999999999998866 9999999999999999983
No 5
>2bii_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 1.70A {Pichia angusta}
Probab=100.00 E-value=5.6e-81 Score=607.01 Aligned_cols=283 Identities=31% Similarity=0.611 Sum_probs=248.3
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|+|+||+|++|+..+++.|++|+.++|+|++|+||+|+|||++||+++ +++||.|+|+|..+ .++|.+
T Consensus 75 ~~l~C~gN~r~~~~~~~~~~G~~W~~~ai~~a~WtGV~L~dlL~~ag~~~-------~a~~V~f~~~D~~~---~g~Y~~ 144 (424)
T 2bii_A 75 VTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEGADNPA---NGAYGT 144 (424)
T ss_dssp EEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESCCCT---TSSCEE
T ss_pred EEEEecCCccccccccccccccccccCceEeeEEEeeEHHHHHHhcCCCC-------CceEEEEEecCCCC---CCCEEE
Confidence 36999999999998889999999999999999999999999999999984 58999999998432 237999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||+++.++||||+||||||+++|||||||||||+||++|||||++|+|+++++++|||.++|+++|+..+++.+
T Consensus 145 sipl~~a~d~~~dvlLA~~mNGepL~~~hG~PlRLVvPg~~G~rsvKwl~~I~v~~~~~~g~~~~~~yrv~p~~~~~~~~ 224 (424)
T 2bii_A 145 CIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMA 224 (424)
T ss_dssp EEEHHHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCSSEEEEEEESSCCCCHHHHSSSBCCCTTCCHHHH
T ss_pred EEEHHHHhCCCCCEEEEEeeCCcCCCcccCCceEEEecccccCCccccCcEEEEEeccCCCceeeecccccCCCCCcccc
Confidence 99999999975579999999999999999999999999999999999999999999999999999999999877655321
Q ss_pred ----C-CC-CCCCccceeceEEEEecCCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCcc
Q 022262 161 ----N-WK-SRRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYI 232 (300)
Q Consensus 161 ----~-~~-~~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~ 232 (300)
+ |. ...+|++|+|||+|+.|.++++|+ .|+|+|+||||||||++|+|||||+|+|+||++|+|..++. |+.
T Consensus 225 ~~~~~~w~~~~~~i~~l~v~S~I~~P~~~~~v~~~~g~~~v~GyA~sGGGr~I~rVEVS~DgG~tW~~A~L~~pe~-~~~ 303 (424)
T 2bii_A 225 KSDDRWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPED-RYR 303 (424)
T ss_dssp HHCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSTTSSCEECEEECTHH-HHH
T ss_pred ccccCccccCcceecccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCceEeEccCcCC-ccc
Confidence 2 33 235899999999999999999996 46899999999998999999999999999999999986541 110
Q ss_pred --c-cCCC---------CCceeeEEeEEEEEC---CCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 022262 233 --A-DHMS---------SDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 296 (300)
Q Consensus 233 --~-~~~~---------~~~~aW~~W~~~~~~---~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~ 296 (300)
+ +..+ ++.|||++|+++|++ .+.++|+|||||++||+||+.. +||++||+||+||||+|++.
T Consensus 304 ~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~~gn~QP~~~--~WN~~G~~nN~~~rv~v~~~ 380 (424)
T 2bii_A 304 EAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRTM--YWNVTSMLNNWWYRVAIIRE 380 (424)
T ss_dssp HTCSEEETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSSC--CCCTTCCSCCSCEEEEEEEE
T ss_pred ccccccccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCCc--cccccccccCcEEEEEEEec
Confidence 0 0001 248999999999986 4678999999999999999864 59999999999999999973
No 6
>2bih_A Nitrate reductase [NADPH]; flavoprotein, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta}
Probab=100.00 E-value=4e-80 Score=606.86 Aligned_cols=283 Identities=31% Similarity=0.611 Sum_probs=248.5
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|+|+||+|++|+..+++.|.+|+.++|+|++|+||+|+|||++||+++ ++++|.|+|+|..+ .++|.+
T Consensus 125 ~~l~CvgN~r~e~~~v~~~~G~~W~~~avs~a~WtGV~L~dlL~~aG~~~-------~A~~V~f~g~D~~~---~g~Y~~ 194 (474)
T 2bih_A 125 VTMVCAGNRRKEQNMVKKGAGFNWGAAGTSTSLWTGCMLGDVIGKARPSK-------RARFVWMEGADNPA---NGAYGT 194 (474)
T ss_dssp EEEECTTTTHHHHHHHSCCSSCCCCSCCEEEEEEEEEEHHHHHHHTCBCT-------TCCEEEEEESCCCT---TSSCEE
T ss_pred EEEEccCCccccccccccccccccccCceeeeEEEeEEHHHHHHhcCCCC-------CceEEEEEecCCCC---CCCeEE
Confidence 36999999999998889999999999999999999999999999999984 58999999998432 237999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||++++++||||+||||||+++|||||||||||+||++|||||++|+|+++++++|||.++|+++|+..+++.+
T Consensus 195 sipl~~ald~~~dvlLA~~mNGepLp~~hG~PlRLVvPg~~G~rsvKWL~~Iev~~~~~~g~~~~~~yrv~p~~~~~~~~ 274 (474)
T 2bih_A 195 CIRLSWCMDPERCIMIAYQQNGEWLHPDHGKPLRVVIPGVIGGRSVKWLKKLVVSDRPSENWYHYFDNRVLPTMVTPEMA 274 (474)
T ss_dssp EEEHHHHTCTTTCCEEEEEETTEECCGGGTTTCEEECTTBBGGGSCSSEEEEEEESSCCCCHHHHHSSBCCCTTCCHHHH
T ss_pred EEEHHHHhCcCCCEEEEEeeCCeECCccCCCeeEEEecccccCCccccCCEEEEEeccCCCceeeecccccCCCCCcccc
Confidence 99999999975579999999999999999999999999999999999999999999999999999999999877655321
Q ss_pred ----C-CCC-CCCccceeceEEEEecCCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCcc
Q 022262 161 ----N-WKS-RRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYI 232 (300)
Q Consensus 161 ----~-~~~-~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~ 232 (300)
+ |.+ ..+|++|+|||+|+.|.++++|+ .|+|+|+||||||||++|+|||||+|||+||+.|+|..++. ++.
T Consensus 275 ~~~~~~W~~~~~~i~~~~vnS~I~~P~~~e~v~~~~g~~~v~GyA~sGGGr~I~RVEVS~DgG~TW~~A~L~~pe~-~~r 353 (474)
T 2bih_A 275 KSDDRWWKDERYAIYDLNLQTIICKPENQQVIKISEDEYEIAGFGYNGGGVRIGRIEVSLDKGKSWKLADIDYPED-RYR 353 (474)
T ss_dssp HTCGGGGSCGGGBCCBCCCEEEEEESCTTCEEECCSCEEEEEEEEECSTTCCEEEEEEESSSSSSCEECEEECTHH-HHH
T ss_pred ccccCccccCcceeeccccceEEecCCCCCEeecCCCeEEEEEEEEcCCCCCEEEEEEEcCCCCCceECcccCccc-ccc
Confidence 3 443 45899999999999999999996 45899999999998999999999999999999999986541 110
Q ss_pred --c-cCCC---------CCceeeEEeEEEEEC---CCccEEEEEeEeCCCCCCCCCcccccccccCCCCceEEEEEEEe
Q 022262 233 --A-DHMS---------SDKWAWVFFEVIIDI---PHSTQIVAKAVDTAANVQPESVETIWNLRGVLNTSWHRVQVRVG 296 (300)
Q Consensus 233 --~-~~~~---------~~~~aW~~W~~~~~~---~~~~~i~~RA~D~~G~~QP~~~~~~wN~~G~~~N~~~~v~v~v~ 296 (300)
+ +..+ ++.|||++|+++|++ .+.++|+|||||++||+||+.. +||++||+||+||||+|++.
T Consensus 354 ~~~~~~~~g~~~~~~~~~~~~~W~~W~~~~~~~~~~g~~~I~vRA~D~sgn~QP~~~--~WN~~G~~nN~~~rV~v~~~ 430 (474)
T 2bih_A 354 EAGYFRLFGGLVNVCDRMSCLCWCFWKLKVPLSELARSKDILIRGMDERMMVQPRTM--YWNVTSMLNNWWYRVAIIRE 430 (474)
T ss_dssp HTCCEEETTEEECGGGCCCCCSCEEEEEEEEHHHHHTCSEEEEEEEETTCCBCCSSC--CCCTTCCSCCSCEEEEEEEE
T ss_pred ccccccccccccccccccccceeeeeEEEEecccCCCceEEEEEEEcCCCCcCCCCc--cccccccccCcEEEEEEEec
Confidence 0 0001 248999999999986 4678999999999999999864 59999999999999999973
No 7
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=100.00 E-value=8.1e-72 Score=538.02 Aligned_cols=258 Identities=29% Similarity=0.416 Sum_probs=230.7
Q ss_pred CcEEccCCCccCcccccccCCcCCCCCceeeeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCccccCCCCeEE
Q 022262 1 MHGQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKA 80 (300)
Q Consensus 1 ~~lqCaGN~R~~~~~~~~~~g~~W~~g~i~~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~~~~~~~Y~~ 80 (300)
++|+|+||+|.+++. +++.|.+|+.|+|++++|+||+|+|||++||+++ ++++|.|+|+| +..|.+
T Consensus 116 ~~l~C~gn~r~~w~~-~~~~g~~w~~g~i~~~~W~GV~L~dlL~~ag~~~-------~a~~V~~~~~D------g~~y~~ 181 (390)
T 2xts_A 116 AFCECAANGGMEWGG-AQLEGCQYTQGMIHNMEYVGVPLSVLLAEAGVKP-------EGKWLYAEGAD------ASSNGR 181 (390)
T ss_dssp EEEECTTTTGGGTTS-CCCSSHHHHHCSEEEEEEEEEEHHHHHHHHCBCT-------TCCEEEEEESS------TTCCCE
T ss_pred EEEEecCCccccccc-ccccccccccCceeeeEEEEEEHHHHHHhcCCCC-------CceEEEEEecC------CCeEEE
Confidence 369999999977753 4589999999999999999999999999999984 58999999998 123999
Q ss_pred EEechhhcCCCCCeEEEEeeCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCC
Q 022262 81 SIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNI 160 (300)
Q Consensus 81 sipl~~a~~~~~~vlLAy~mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~ 160 (300)
+|||++||+ ++||||+||||||+++||||||||+||+||++|||||++|+|+++++++|||..+|+.+.|....
T Consensus 182 sipl~~a~~---~~lLA~~mNGepL~~~hG~PlRLVvPg~~G~~svKwl~~I~v~~~~~~~~~~~~~y~~~~~~~~~--- 255 (390)
T 2xts_A 182 SFPMEKVMD---DVMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSKYTDLMPDGRA--- 255 (390)
T ss_dssp EEEHHHHHH---HCEEEEEETTEECCGGGTTTCEEECTTBCGGGSCBSEEEEEEESSCCCCGGGTTSSCEECTTSCE---
T ss_pred EEEHHHHhc---CcEEEEeECCeECCccCCCceEEEecCccCcccceeccEEEEEecCCCCchhhccccccCCCCCc---
Confidence 999999997 69999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCCccceeceEEEEecCCCCeec--CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCC
Q 022262 161 NWKSRRPLMDFPVQCVICSLEDVNVMK--PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSS 238 (300)
Q Consensus 161 ~~~~~~~i~~~~v~S~I~~P~~g~~v~--~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~ 238 (300)
..++.+|+|||+|++|.++++|+ +|.++|+||||+|+| +|+|||||+|+|+||++|+|..+..
T Consensus 256 ----~~~~~~~~vnS~I~~P~~~~~i~~~~g~~~v~G~A~~G~g-~I~rVevS~DgG~tW~~A~L~~~~~---------- 320 (390)
T 2xts_A 256 ----RKWTWVMDAKSVITSPSPQVPIRHGKGPLVISGLAWSGNG-RITRVDVSLDGGKNWTTARITGQAL---------- 320 (390)
T ss_dssp ----EECCCBCCCEEEEEESBTTBCCCSCSEEEEEEEEEECTTS-CEEEEEEESBTTSSCEECEEESCCC----------
T ss_pred ----cccceeecCceeeecCCCCCEeecCCCcEEEEEEEEcCCC-cEEEEEEecCCCCcEEEeeccCCCC----------
Confidence 23578999999999999999995 458999999999877 7999999999999999999997764
Q ss_pred CceeeEEeEEEEECC-CccEEEEEeEeCCCCCCCCCccccccc----ccCCCCceEEEEEEE
Q 022262 239 DKWAWVFFEVIIDIP-HSTQIVAKAVDTAANVQPESVETIWNL----RGVLNTSWHRVQVRV 295 (300)
Q Consensus 239 ~~~aW~~W~~~~~~~-~~~~i~~RA~D~~G~~QP~~~~~~wN~----~G~~~N~~~~v~v~v 295 (300)
+++|++|++.|.+. +.++|+|||||++||+||+.. .+||+ .||++|++|+++|..
T Consensus 321 -~~aw~~w~~~~~~~~g~~~i~vRA~D~~gn~QP~~~-~~~~~~g~~~gy~~n~i~~~~v~~ 380 (390)
T 2xts_A 321 -PKALTRFHLDIDWDGSEMLLQSRAVDETGYVQPTKD-ALRAIRGRNNVYHNNGIQTWWVKA 380 (390)
T ss_dssp -TTSCEEEEEEEEECSCCEEEEEEEEETTCCBCCCHH-HHHHHHCSCCCSCCCCCCEEEECT
T ss_pred -CCceEEEEEEEEcCCCccEEEEEEEcCCCCcCCCcc-cccccCccccceeeeeEEEEEEcc
Confidence 68999999999884 557999999999999999864 36877 579999999999874
No 8
>1xdy_A Bacterial sulfite oxidase; bioinformatics, sequence analysis, electron transfer, oxidoreductase, molybdoenzymes, molybdopterin; HET: MTE; 2.20A {Escherichia coli} SCOP: d.176.1.1 PDB: 1xdq_A*
Probab=100.00 E-value=5.6e-38 Score=292.18 Aligned_cols=172 Identities=20% Similarity=0.256 Sum_probs=132.4
Q ss_pred eeeEEceeHHHHHHHcCCCCCCCccCCCceEEEEEEccCcc---ccC--------CCCeEEEEechhhcCCCCCeEEEEe
Q 022262 31 NAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCK---EEN--------GGPYKASIPLSQATNPEADVLLAYE 99 (300)
Q Consensus 31 ~a~w~GV~L~dlL~~aG~~~~~~~~~~~a~~V~f~~~D~~~---~~~--------~~~Y~~sipl~~a~~~~~~vlLAy~ 99 (300)
++.|+||+|+|||++||+++ ++++|.|+|+|... ++. ...|.++|||++||++ ++||||+
T Consensus 109 ~~~W~GV~L~dLL~~aG~~~-------~A~~V~f~~~dd~~~~~G~~~~~~~~~~~~~Y~~slpl~~a~~~--~~lLA~~ 179 (298)
T 1xdy_A 109 VVPWIGFPLHKLLALAEPTS-------NAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHP--LTLMTVG 179 (298)
T ss_dssp EEEEEEEEHHHHHHHHCBCT-------TCCEEEEEECCCTTTCGGGTCTTTTTTCCSSCEEEEEHHHHHST--TCEEEEE
T ss_pred eeEEEeEEHHHHHHHcCCCC-------CCeEEEEEeCCChhcccCccccccccccCCCeEEEEEHHHhcCC--CEEEEEe
Confidence 78999999999999999984 58999999997321 211 1369999999999996 7999999
Q ss_pred eCCccCCCCCCCceEEEecCccCceeeEeeeEEEeeccccCCceeeeccccCCCCCCCCCCCCCCCCCccceeceEEEEe
Q 022262 100 MNGEPLNRDHGYPLRVVVPGVIGARSVKWLDTINILAEECQGFFMQKDYKMFPPSVNWDNINWKSRRPLMDFPVQCVICS 179 (300)
Q Consensus 100 mNGepL~~~hG~PlRlvvPg~~G~~~vKwl~~Iev~~~~~~g~w~~~~Y~~~~~~~~~~~~~~~~~~~i~~~~v~S~I~~ 179 (300)
|||||||++|||||||||||+||+||||||++|+|+++++++|||+.+|+.+.... +++..-..|.++|..+++|..
T Consensus 180 mNGepLp~~hG~PlRLVVPg~yG~ksvKwl~~Iev~~~~~~g~We~~~y~~yg~~~---n~n~~v~~P~w~q~~er~i~~ 256 (298)
T 1xdy_A 180 VYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYA---NVNPYVDHPRWSQATERFIGS 256 (298)
T ss_dssp ETTEECCGGGTCSCEEECTTBCGGGSCCSEEEEEEESSCCCCHHHHHCTTTCCSSC---BCCTTSCBTTBCCSEEEECCC
T ss_pred eCCeECCcccCCceEEEeCCccccCcceeccEEEEEeCCCCCchhhcCccccCccc---CCCCCCCCCcccccceeEEcC
Confidence 99999999999999999999999999999999999999999999999988764211 111111234566666666641
Q ss_pred cCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcE
Q 022262 180 LEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWV 219 (300)
Q Consensus 180 P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~ 219 (300)
.+. +- ..++..+++.|++..|++++.++|.++...
T Consensus 257 --g~~-~~--~~r~~t~~fnGy~~~va~ly~~md~~~~~~ 291 (298)
T 1xdy_A 257 --GGI-LD--VQRQPTLLFNGYADQVASLYRGLDLRENFL 291 (298)
T ss_dssp --C---------CEECCGGGGTHHHHHHHHTTCCC-----
T ss_pred --CCc-ee--ecccCceeecccHHHhhhhhhCcccchhhh
Confidence 100 00 135688899998889999999999987654
No 9
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=99.15 E-value=7.7e-11 Score=92.64 Aligned_cols=75 Identities=20% Similarity=0.105 Sum_probs=63.0
Q ss_pred EEEecCCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEEEC-C
Q 022262 176 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-P 253 (300)
Q Consensus 176 ~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~-~ 253 (300)
.|+.|.+|+++..| .++|.+-|++..| .|.+|||++||+. +. .-.|..|+|.|+. .
T Consensus 3 sItsP~~ga~v~~g~~v~i~a~A~D~dg-~V~kVef~vdg~~------vg---------------~dt~apy~~~w~~~~ 60 (98)
T 3pe9_A 3 KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGEV------IG---------------SDREAPYEYEWKAVE 60 (98)
T ss_dssp EEEECCTTCCEETTSEEEEEEEECCSSS-CEEEEEEEETTEE------EE---------------EECSSSEEEEEECCS
T ss_pred EEeeCCCcCEEcCCCEEEEEEEEEeCCC-CEEEEEEEECCEE------ec---------------ccccCCEEEEEEcCC
Confidence 58999999999987 5999999998644 7999999999962 21 2256789999987 5
Q ss_pred CccEEEEEeEeCCCCCCCC
Q 022262 254 HSTQIVAKAVDTAANVQPE 272 (300)
Q Consensus 254 ~~~~i~~RA~D~~G~~QP~ 272 (300)
|.++|.+||+|.+|++|..
T Consensus 61 G~htl~a~AtD~~G~~~tS 79 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTP 79 (98)
T ss_dssp EEEEEEEEEEETTCCBCCC
T ss_pred ccEEEEEEEEECCCCEEee
Confidence 6789999999999999975
No 10
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=98.02 E-value=8.3e-06 Score=70.83 Aligned_cols=74 Identities=14% Similarity=-0.017 Sum_probs=58.3
Q ss_pred EEEecCCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEEEC--
Q 022262 176 VICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDI-- 252 (300)
Q Consensus 176 ~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~-- 252 (300)
.|+.|.+|+.+..| .++|.+-|++ .+ +|.+|||.+||. .+. . -.|..|++.|..
T Consensus 3 ~ItsP~~g~~~~~g~~vtv~~~As~-d~-~V~~Ve~~~dg~------~v~-~--------------~t~~~ys~~~~~~~ 59 (190)
T 3pdd_A 3 TIDSPVAGERFEAGKDINISATVKS-KT-PVSKVEFYNGDT------LIS-S--------------DTTAPYTAKITGAA 59 (190)
T ss_dssp EEEESCTTCEEETTSCEEEEEEECC-SS-CEEEEEEEETTE------EEE-E--------------ECSSSEEEEECSCC
T ss_pred EEecCCCCCEEcCCCeEEEEEEEeC-CC-CEEEEEEEECCE------EEc-c--------------ccCCceEEEeccCC
Confidence 58899999999988 7999999994 34 899999999974 111 1 123457777775
Q ss_pred CCccEEEEEeEeCCCCCCCC
Q 022262 253 PHSTQIVAKAVDTAANVQPE 272 (300)
Q Consensus 253 ~~~~~i~~RA~D~~G~~QP~ 272 (300)
.+.++|.+||+|.+||++..
T Consensus 60 ~G~htlta~A~D~aGn~s~s 79 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIES 79 (190)
T ss_dssp SEEEEEEEEEEETTSCEEEC
T ss_pred CccEEEEEEEEECCCCEeee
Confidence 46689999999999999763
No 11
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=97.55 E-value=0.00032 Score=60.70 Aligned_cols=78 Identities=19% Similarity=0.134 Sum_probs=56.9
Q ss_pred eceEEEEecCCCCeecCC-cEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEE
Q 022262 172 PVQCVICSLEDVNVMKPG-KAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVII 250 (300)
Q Consensus 172 ~v~S~I~~P~~g~~v~~g-~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~ 250 (300)
++.-.|+.|..+..+..| .++|++-|-+..| .|.+|||.+||.. +..... ..|+|.|
T Consensus 91 ~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg~~------v~t~t~---------------~~y~~~~ 148 (190)
T 3pdd_A 91 KPTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGEV------IGSDRE---------------APYEYEW 148 (190)
T ss_dssp CCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETTEE------EEEECS---------------SSEEEEE
T ss_pred CCceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECCEE------EecccC---------------CCEEEEE
Confidence 445568899999988755 7999999987544 6999999999741 111111 2355556
Q ss_pred EC-CCccEEEEEeEeCCCCCCC
Q 022262 251 DI-PHSTQIVAKAVDTAANVQP 271 (300)
Q Consensus 251 ~~-~~~~~i~~RA~D~~G~~QP 271 (300)
.. .+.++|.+||+|.+||+-.
T Consensus 149 ~~~~G~~tl~a~A~D~aGn~s~ 170 (190)
T 3pdd_A 149 KAVEGNHEISVIAYDDDDAAST 170 (190)
T ss_dssp ECCSEEEEEEEEEEETTCCBCC
T ss_pred ecCCeeEEEEEEEEECCCCEEe
Confidence 65 5668999999999999864
No 12
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=63.91 E-value=9.3 Score=37.57 Aligned_cols=65 Identities=17% Similarity=0.124 Sum_probs=34.4
Q ss_pred EEEEEcCCCCCcEEeecCCCCCCCcc-ccC---CC-----CCceeeEEeEEEEECCCccEEEEEeEeCCCCCCCC
Q 022262 207 RVDISVDGGKNWVEASRYQKTGIPYI-ADH---MS-----SDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQPE 272 (300)
Q Consensus 207 rVeVS~DgG~tW~~A~l~~~~~~~~~-~~~---~~-----~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP~ 272 (300)
+|-.|.|+|+||.++...... .|.. +.. .. ...-.|.++.-.........+.++...+.|.+=+.
T Consensus 401 ~v~~S~D~G~TWt~~~~~~~~-L~~P~c~~Sii~~~~~~~~~g~~~lL~snp~~~~~R~~l~v~~S~D~G~TW~~ 474 (523)
T 4fj6_A 401 AVATTKDLGKTWTEHPSSRSA-LQESVCMASLIKVNAKDNITGKDLLLFSNPNTTKGRNHITIKASLDGGLTWPT 474 (523)
T ss_dssp EEEEESSTTSSCEECTTTTTS-SBCSSCCCEEEEECGGGSTTCSCEEEEEEECCSSSSCCEEEEEESSTTSCCCG
T ss_pred EEEEECCCCCccCcCcCcccc-CCCCCcccEEEEEecccCCCCCcEEEEEccCCCCccccceEEEeCCCCCCCcc
Confidence 789999999999998532111 1110 000 00 00113555554332333446677777777776554
No 13
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=63.38 E-value=8.3 Score=37.94 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=38.7
Q ss_pred EEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecC
Q 022262 175 CVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 224 (300)
Q Consensus 175 S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~ 224 (300)
.++..|-+|-+++.|++.+-.++....|.....+-.|.|+|+||+.....
T Consensus 322 ~~~~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~~ 371 (523)
T 4fj6_A 322 FLLQGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNLA 371 (523)
T ss_dssp EEEECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCS
T ss_pred EEecCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCCC
Confidence 35556666777788998887787765566688999999999999977543
No 14
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=61.57 E-value=38 Score=34.28 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=42.8
Q ss_pred ceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecCCC
Q 022262 173 VQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRYQK 226 (300)
Q Consensus 173 v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~~~ 226 (300)
....|..|-.|-+++.|++.+--++....+..+.-+-.|.|+|+||+......+
T Consensus 186 ~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G~TW~ls~~~~~ 239 (648)
T 1ms9_A 186 TNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEGKTWKFGKGRSA 239 (648)
T ss_dssp EEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTTSSCEECSCCCC
T ss_pred eEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCCCCEEECCCCCC
Confidence 456677777777888999888888876556678889999999999998766543
No 15
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=60.02 E-value=11 Score=39.04 Aligned_cols=51 Identities=18% Similarity=0.047 Sum_probs=39.3
Q ss_pred ceEEEEecCCCCeec---------CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecC
Q 022262 173 VQCVICSLEDVNVMK---------PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 224 (300)
Q Consensus 173 v~S~I~~P~~g~~v~---------~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~ 224 (300)
+++++..|-+|-+++ .|++.+-.++..+ +..-..+.+|-|+|+||+.....
T Consensus 541 ~~~~~~GPG~GIql~~~p~~~g~~dGRLV~P~~~~~~-~~~~s~~~ySdD~GkTW~~g~~i 600 (781)
T 1w0p_A 541 NASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDR-FFLNVMSIYSDDGGSNWQTGSTL 600 (781)
T ss_dssp CSEEECCSSCCEECCCCTTSTTCCTTCEEEEEEEESS-SCEEEEEEEESSSSSSCEECCCC
T ss_pred cceeecCCCceEEEeeccccCcCCCCeEEEEEEEeCC-CCcEEEEEEECCCCCcccccccc
Confidence 456777887777776 6888888888764 33467889999999999987664
No 16
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=56.08 E-value=20 Score=33.28 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=26.6
Q ss_pred ecCCcEEEEEEEEeCC-CCCeEEEEEEcCCCCCcEEeec
Q 022262 186 MKPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 186 v~~g~v~i~G~A~sGg-g~~I~rVeVS~DgG~tW~~A~l 223 (300)
++.|++.+.|.++... ...-..|..|.|+|+||+....
T Consensus 95 ~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~ 133 (355)
T 3a72_A 95 FKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSH 133 (355)
T ss_dssp BCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEE
T ss_pred CCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCcc
Confidence 3467777777776421 1235679999999999988765
No 17
>3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A
Probab=52.56 E-value=63 Score=31.45 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=55.6
Q ss_pred eceEEEEecCCCCeecCCcEEEEEEEEeCCCCCeEEEEEEcCCCCC---cEEeecCCCCCCCccccCCCCCceeeEEeEE
Q 022262 172 PVQCVICSLEDVNVMKPGKAKVSGYAVSGGGRGIERVDISVDGGKN---WVEASRYQKTGIPYIADHMSSDKWAWVFFEV 248 (300)
Q Consensus 172 ~v~S~I~~P~~g~~v~~g~v~i~G~A~sGgg~~I~rVeVS~DgG~t---W~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~ 248 (300)
.....|..|.++++|..++++|+=-.-. ...++|-+++|++.+ =....++.. + .|+.
T Consensus 372 ~~~~~~~~p~~~~~~~~~~~~i~~~v~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~-g----------------~~~~ 431 (475)
T 3tp4_A 372 QPVVHIASPADGARVASAPTTVRVRVGG---TDVQSVTVEVAQGGTVVDTLDLAYDGA-L----------------WWTA 431 (475)
T ss_dssp CCEEEEEESCTTCEECSSSEEEEEEEES---SCEEEEEEEEEETTEEEEEEECEECSS-S----------------CEEE
T ss_pred CceEEEeccCCCCEEcccceEEEEEEec---CCCceEEEEeCCCCccccceeeeeccC-c----------------eEee
Confidence 4456799999999999888888866653 378999999998854 122222221 2 5888
Q ss_pred EEECC------CccEEEEEeEeCCCCC
Q 022262 249 IIDIP------HSTQIVAKAVDTAANV 269 (300)
Q Consensus 249 ~~~~~------~~~~i~~RA~D~~G~~ 269 (300)
+|.+. +..+|.+.||..+|..
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T 3tp4_A 432 PWSPTSAQLDNSTYTVTATATTAAGTL 458 (475)
T ss_dssp EECCC--------CEEEEEEEETTEEE
T ss_pred ccCCChhhccCceEEEEEEEeecccee
Confidence 99883 2359999999998854
No 18
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=51.95 E-value=26 Score=32.06 Aligned_cols=49 Identities=14% Similarity=0.081 Sum_probs=33.0
Q ss_pred EEEEecCCCCeecC--CcEEEEEEEEeCC-----CCCeEEEEEEcCCCCCcEEeec
Q 022262 175 CVICSLEDVNVMKP--GKAKVSGYAVSGG-----GRGIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 175 S~I~~P~~g~~v~~--g~v~i~G~A~sGg-----g~~I~rVeVS~DgG~tW~~A~l 223 (300)
.++..|-.+-.+.. |++.+-.++.... +.....+-.|.|+|+||+....
T Consensus 158 ~~~~~pg~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~ 213 (382)
T 1so7_A 158 TFAVGPGHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF 213 (382)
T ss_dssp EEEECSSCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCC
T ss_pred eeccCCCcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCCceeEcCcc
Confidence 34555655556666 8877655665321 1346778899999999998764
No 19
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=51.27 E-value=17 Score=33.75 Aligned_cols=21 Identities=33% Similarity=0.287 Sum_probs=16.8
Q ss_pred CCCeEEEEEEcCCCCCcEEee
Q 022262 202 GRGIERVDISVDGGKNWVEAS 222 (300)
Q Consensus 202 g~~I~rVeVS~DgG~tW~~A~ 222 (300)
+.....|..|.|+|+||.+..
T Consensus 48 ~~~~~~v~rS~DgG~TW~~~~ 68 (355)
T 3a72_A 48 PAVYFPIYRSKDHGKTWNEIS 68 (355)
T ss_dssp SCCCEEEEEESSTTSCCEEEE
T ss_pred CCceEEEEEEcCCCcCcCCCc
Confidence 335667899999999999854
No 20
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=48.86 E-value=19 Score=33.62 Aligned_cols=21 Identities=38% Similarity=0.422 Sum_probs=16.9
Q ss_pred CCCeEEEEEEcCCCCCcEEee
Q 022262 202 GRGIERVDISVDGGKNWVEAS 222 (300)
Q Consensus 202 g~~I~rVeVS~DgG~tW~~A~ 222 (300)
+.....|..|.|+|+||++..
T Consensus 53 ~~~~~~v~rS~DgG~TW~~~~ 73 (367)
T 2ydt_A 53 PNVWFPIVKSKDGGKTWKEIS 73 (367)
T ss_dssp SCCCEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEEECCCCcCcCcCc
Confidence 345667899999999999853
No 21
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=47.90 E-value=31 Score=32.14 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=26.4
Q ss_pred ecCCcEEEEEEEEeCC-CCCeEEEEEEcCCCCCcEEeec
Q 022262 186 MKPGKAKVSGYAVSGG-GRGIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 186 v~~g~v~i~G~A~sGg-g~~I~rVeVS~DgG~tW~~A~l 223 (300)
++.|++.+-+.++... ...-..|..|.|+|+||+....
T Consensus 100 ~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~ 138 (367)
T 2ydt_A 100 YPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSH 138 (367)
T ss_dssp BCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEE
T ss_pred cCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCee
Confidence 4467777777666421 1235679999999999988654
No 22
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=37.64 E-value=92 Score=23.76 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=37.0
Q ss_pred CCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCC
Q 022262 203 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 271 (300)
Q Consensus 203 ~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP 271 (300)
+=|..|+++. +|+.-..+++...- +.. =.++|.+.......|.++++|..|++--
T Consensus 45 ~~I~~v~~~~-ng~~v~~~~~~~~i-----S~n--------P~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 99 (107)
T 1v8h_A 45 KYINLVEVYF-EGEKVAEARPGPST-----SAN--------PLYAFKFKAEKAGTFTIKLKDTDGDTGE 99 (107)
T ss_dssp BCEEEEEEEE-TTEEEEEECCCSSC-----CSS--------CEEEEEEECCSCEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEE-CCEEEEEEEeCCcc-----ccC--------CeEEEEEecCCCceEEEEEEECCCCEEE
Confidence 4488888885 44567777776442 111 1567777775555699999999998654
No 23
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=37.37 E-value=85 Score=24.04 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=36.2
Q ss_pred CCeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEEECCCccEEEEEeEeCCCCCCC
Q 022262 203 RGIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAKAVDTAANVQP 271 (300)
Q Consensus 203 ~~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~RA~D~~G~~QP 271 (300)
+=|..|+++. +|+.-..+++...- +.. =.++|.+......+|.++++|..|++--
T Consensus 46 ~~I~~v~~~~-ng~~v~~~~~~~~i-----S~N--------P~~~F~~~~~~~g~l~v~~~Dn~G~~~~ 100 (108)
T 2oxg_Z 46 SIINRFTCEL-NGVNVVDVAIDPAV-----STN--------PYFEFDAKVDAAGEFKFTWYDDDGSVYE 100 (108)
T ss_dssp BCEEEEEEEE-TTEEEEEEEECTTB-----CSS--------CEEEEEEEECSSEEEEEEEEETTSCEEE
T ss_pred HheEEEEEEE-CCEEEEEEEeCCcc-----ccC--------CeEEEEEecCCCcEEEEEEEECCCCEEE
Confidence 4478888875 44677777776442 111 1566666664444899999999998643
No 24
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=36.66 E-value=36 Score=32.24 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=32.2
Q ss_pred EEEEEEcCCCCCcEEeecCC-CCCCCc-ccc-------C----CCCCceeeEEeEEEEECC---CccEEEEEeEeCCCCC
Q 022262 206 ERVDISVDGGKNWVEASRYQ-KTGIPY-IAD-------H----MSSDKWAWVFFEVIIDIP---HSTQIVAKAVDTAANV 269 (300)
Q Consensus 206 ~rVeVS~DgG~tW~~A~l~~-~~~~~~-~~~-------~----~~~~~~aW~~W~~~~~~~---~~~~i~~RA~D~~G~~ 269 (300)
.++|.|+|+|.+|+.-.... |.. +. .+. . .....-.|++..+.+++. ....+.-.-.+.+++.
T Consensus 101 V~LeYStd~G~sW~~v~~~c~P~~-~~~~C~~~~~~~~~~si~~a~~~~~W~riti~lP~~~~s~~TrFRW~Q~~~~~~~ 179 (387)
T 2ddu_A 101 VLLQYSHDAGMSWFLVKEGCFPAS-AGKGCEGNSRELSEPTVYYTGDFEEWTRITIAIPRSLASSKTRFRWIQESSSQKN 179 (387)
T ss_dssp EEEEEESSTTSCCEESCCCBCTTC-CSSSSCTTSCCCBCCSEECTTSCSSCEEEEEECCGGGCSSCCEEEEECC------
T ss_pred EEEEEEeCCCcceEeeecccccCC-CCcccccccccccCcceeccccccCceEEEEECChhhcCCcceEEEEcccCCccc
Confidence 56999999999999654322 110 00 000 0 011135799998888872 3334444333444444
Q ss_pred CC
Q 022262 270 QP 271 (300)
Q Consensus 270 QP 271 (300)
++
T Consensus 180 ~~ 181 (387)
T 2ddu_A 180 VP 181 (387)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 25
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=36.64 E-value=32 Score=26.27 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=17.9
Q ss_pred CCccEEEEEeEeCCCCCCCCC
Q 022262 253 PHSTQIVAKAVDTAANVQPES 273 (300)
Q Consensus 253 ~~~~~i~~RA~D~~G~~QP~~ 273 (300)
...|++.++|.+..|..+|..
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~ 94 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTV 94 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEE
T ss_pred CCEEEEEEEEEeCCcCcCCcC
Confidence 456799999999999999854
No 26
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.73 E-value=47 Score=23.93 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.5
Q ss_pred CCccEEEEEeEeCCCCCCCC
Q 022262 253 PHSTQIVAKAVDTAANVQPE 272 (300)
Q Consensus 253 ~~~~~i~~RA~D~~G~~QP~ 272 (300)
...|.+.+||.+..|...|.
T Consensus 75 ~t~Y~frV~A~n~~G~s~~S 94 (110)
T 2yuw_A 75 DAKIFVRVKAVNAAGASEPK 94 (110)
T ss_dssp TCEEEEEEEEEETTEECCCE
T ss_pred CCEEEEEEEEEcCCcCCCCc
Confidence 34579999999999987774
No 27
>4eib_A Glucoamylase; beta barrel, starch binding, amylose, hydrolase; 1.86A {Rhizopus oryzae}
Probab=35.58 E-value=33 Score=26.73 Aligned_cols=58 Identities=21% Similarity=0.210 Sum_probs=38.1
Q ss_pred CCcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEE------eecCCCCCCCccccCCCCCceeeEEeEEEEECCCccEEEEE
Q 022262 188 PGKAKVSGYAVSGGGRGIERVDISVDGGKNWVE------ASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIPHSTQIVAK 261 (300)
Q Consensus 188 ~g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~------A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~~~~~~i~~R 261 (300)
.|++.|+=+|+. +..-|..|+ +|..|+. |.-.... ..-.+..|.|..+.++..++.+|
T Consensus 42 sGtI~V~NlAye----K~V~VrYs~-~~d~W~s~~~~~~A~y~s~~-----------~~~~~e~~~F~~~apGa~qFaIr 105 (109)
T 4eib_A 42 SGKIYVKNIAYS----KKVTVVYAD-GSDNWNNNGNIIAASFSGPI-----------SGSNYEYWTFSASVKGIKEFYIK 105 (109)
T ss_dssp EEEEEEECCSSC----EEEEEEEEC-TTSCCTTTTCEEECEEEEEC-----------TTSSEEEEEEEEECSCCCEEEEE
T ss_pred EEEEEEEecccc----eEEEEEEee-cCCCcccCCcEeeEEEecCC-----------CCCCeEEEEEEEECCCCEEEEEE
Confidence 477888888863 777888885 4456765 2222111 02257899999998877776665
No 28
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=34.51 E-value=77 Score=27.87 Aligned_cols=48 Identities=15% Similarity=0.277 Sum_probs=31.9
Q ss_pred CeEEEEEEcCCCCCcEEeecCCCCCCCccccCCCCCceeeEEeEEEEECC-CccEEEEEeEeCCCCC
Q 022262 204 GIERVDISVDGGKNWVEASRYQKTGIPYIADHMSSDKWAWVFFEVIIDIP-HSTQIVAKAVDTAANV 269 (300)
Q Consensus 204 ~I~rVeVS~DgG~tW~~A~l~~~~~~~~~~~~~~~~~~aW~~W~~~~~~~-~~~~i~~RA~D~~G~~ 269 (300)
.|++|||..++...|++-... .+ ..|++.-.++ .+ .|.+|-|+.+|.+
T Consensus 173 ~V~~V~ik~~~~~~W~~m~r~--wG---------------~~W~~~~~~~l~g-pls~RvT~~~G~~ 221 (241)
T 1n10_A 173 DVVAVDIKEKGKDKWIELKES--WG---------------AIWRIDTPDKLTG-PFTVRYTTEGGTK 221 (241)
T ss_dssp CEEEEEEEETTCCCCEECBCC--TT---------------TCEEEECSSCCCS-CEEEEEEESSSCE
T ss_pred CEEEEEEEeCCCCCeEECccC--cC---------------cEEEeCCCCCCCC-CEEEEEEEeCCcE
Confidence 699999999987899865432 11 1455554321 22 5788888887764
No 29
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=33.85 E-value=54 Score=30.66 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=37.4
Q ss_pred eEEEEecCCCCeecCCcEEEEEEEEeC---CCCCeEEEEEEcCCCCCcEEeecC
Q 022262 174 QCVICSLEDVNVMKPGKAKVSGYAVSG---GGRGIERVDISVDGGKNWVEASRY 224 (300)
Q Consensus 174 ~S~I~~P~~g~~v~~g~v~i~G~A~sG---gg~~I~rVeVS~DgG~tW~~A~l~ 224 (300)
..+|..|-+|-+++.|++.+--++... .+..+..+-.|-| |+||+.....
T Consensus 169 ~~~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G~tW~~~~~~ 221 (379)
T 3sil_A 169 SAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-GITWSLPSGY 221 (379)
T ss_dssp EEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-SSSEECCSCC
T ss_pred eeecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-CCCeEECCCC
Confidence 456777777778889998877776532 2456888999999 9999876543
No 30
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=32.28 E-value=59 Score=23.50 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=17.1
Q ss_pred CCccEEEEEeEeCCCCCCCCC
Q 022262 253 PHSTQIVAKAVDTAANVQPES 273 (300)
Q Consensus 253 ~~~~~i~~RA~D~~G~~QP~~ 273 (300)
...|.+.+||.+..|...|..
T Consensus 76 ~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 76 GARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp TCCEEEEEEEEETTEECCCCC
T ss_pred CCEEEEEEEEEcCCcCCCCcc
Confidence 356799999999999877753
No 31
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=30.20 E-value=88 Score=31.60 Aligned_cols=18 Identities=39% Similarity=0.490 Sum_probs=15.1
Q ss_pred EEEEEEcCCCCCcEEeec
Q 022262 206 ERVDISVDGGKNWVEASR 223 (300)
Q Consensus 206 ~rVeVS~DgG~tW~~A~l 223 (300)
.+|=.|.|+|+||.++..
T Consensus 265 R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 265 RLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp CCEEEESSTTSSCEECTT
T ss_pred EEEEEecCCCcccccccc
Confidence 356689999999999975
No 32
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=28.67 E-value=36 Score=32.53 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=31.3
Q ss_pred ecCCCCeecC----CcEEEEEEEEeC----CCCCeEEEEEEcCCCCCcEEeecC
Q 022262 179 SLEDVNVMKP----GKAKVSGYAVSG----GGRGIERVDISVDGGKNWVEASRY 224 (300)
Q Consensus 179 ~P~~g~~v~~----g~v~i~G~A~sG----gg~~I~rVeVS~DgG~tW~~A~l~ 224 (300)
.|-++-.+.. |++.+-.++... .|.....|..|.|+|+||+.....
T Consensus 249 gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G~TW~~~~~v 302 (471)
T 2w20_A 249 GPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWHAGEAV 302 (471)
T ss_dssp CCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTTSSCEECCCT
T ss_pred CCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCCCCcccCCcc
Confidence 4544445554 787776666431 134578899999999999987654
No 33
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=28.61 E-value=70 Score=30.99 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.7
Q ss_pred CeEEEEEEcCCCCCcEEeec
Q 022262 204 GIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 204 ~I~rVeVS~DgG~tW~~A~l 223 (300)
....+-.|.|+|+||+....
T Consensus 188 ~~~~~~~S~D~G~TW~~~~~ 207 (601)
T 1w8o_A 188 FQAVSVYSDDHGRTWRAGEA 207 (601)
T ss_dssp EEEEEEEESSTTSSCEECCC
T ss_pred eeEEEEEECCCCcCccCCCC
Confidence 46778899999999998754
No 34
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=28.05 E-value=67 Score=23.90 Aligned_cols=19 Identities=16% Similarity=0.158 Sum_probs=15.6
Q ss_pred CCccEEEEEeEeCCCC-CCC
Q 022262 253 PHSTQIVAKAVDTAAN-VQP 271 (300)
Q Consensus 253 ~~~~~i~~RA~D~~G~-~QP 271 (300)
...|.+.|||.++.|. ..|
T Consensus 78 ~t~Y~frV~A~N~~G~~s~~ 97 (112)
T 1bpv_A 78 DAAYEFRVIAKNAAGAISPP 97 (112)
T ss_dssp SCCEEEEEEEECTTSCEEEE
T ss_pred CCEEEEEEEEEECCCCCCCC
Confidence 3467999999999998 655
No 35
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=27.71 E-value=52 Score=33.45 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=20.5
Q ss_pred CCeEEEEEEcCCCCCcEEeecCCC
Q 022262 203 RGIERVDISVDGGKNWVEASRYQK 226 (300)
Q Consensus 203 ~~I~rVeVS~DgG~tW~~A~l~~~ 226 (300)
.++..+-.|+|.|+||...++...
T Consensus 465 ~~t~~i~YS~DeG~tW~~~~f~~~ 488 (685)
T 3f6k_A 465 RPINVIKFSTDEGQCWQTYTFTRD 488 (685)
T ss_dssp SCBCEEEEESSTTSSCEEEECCSS
T ss_pred CCcCEEEEECCCCCcccccccCCC
Confidence 467788999999999999999643
No 36
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=27.62 E-value=63 Score=30.46 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=26.0
Q ss_pred CcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeec
Q 022262 189 GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 189 g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l 223 (300)
|++.+--++....|.....|-.|.|+|+||+....
T Consensus 236 Grlv~p~~~~~~~g~~~~~v~~S~D~G~tW~~~~~ 270 (449)
T 2bf6_A 236 GRIVVPVYYTNEKGKQSSAVIYSDDSGKNWTIGES 270 (449)
T ss_dssp TCEEEEEEEECTTCCEEEEEEEESSTTSSCEECCC
T ss_pred CEEEEEEEEEcCCCCEEEEEEEECCCCCceeECCc
Confidence 67666555555445457889999999999998765
No 37
>1pmh_X Cscbm27-1, beta-1,4-mannanase; jellyroll beta-sandwich, hydrolase; HET: MAN BMA; 1.06A {Caldicellulosiruptor saccharolyticus} SCOP: b.18.1.18 PDB: 1pmj_X
Probab=27.02 E-value=45 Score=28.34 Aligned_cols=24 Identities=13% Similarity=0.281 Sum_probs=21.6
Q ss_pred CCCeEEEEEEcCCCCCcEEeecCC
Q 022262 202 GRGIERVDISVDGGKNWVEASRYQ 225 (300)
Q Consensus 202 g~~I~rVeVS~DgG~tW~~A~l~~ 225 (300)
|.+--|++|+.|++++|+++.+.-
T Consensus 44 g~gaLklnv~~~~~~~W~e~ki~~ 67 (185)
T 1pmh_X 44 NKYALRLDVEFNPNNGWDQGDLGT 67 (185)
T ss_dssp BCCEEEEEEECCTTCSCEEEEEEE
T ss_pred CCceEEEEEecCCCCChhheeeEe
Confidence 678999999999999999999854
No 38
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=25.60 E-value=91 Score=31.49 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=31.2
Q ss_pred EEEEecCCCCeecC----CcEEEEEEEEeCCCCCeEEEEEEcCCCCCcEEeecC
Q 022262 175 CVICSLEDVNVMKP----GKAKVSGYAVSGGGRGIERVDISVDGGKNWVEASRY 224 (300)
Q Consensus 175 S~I~~P~~g~~v~~----g~v~i~G~A~sGgg~~I~rVeVS~DgG~tW~~A~l~ 224 (300)
..+..|-++-.+.. |++.+-.++.. .....+-.|.|+|+||+.....
T Consensus 456 ~~~~gpG~gI~l~d~~~~GrLv~p~~~~~---~~~s~i~~SdDgG~TW~~~~~~ 506 (679)
T 2sli_A 456 FLVVGPGIGKQISTGENAGRLLVPLYSKS---SAELGFMYSDDHGDNWTYVEAD 506 (679)
T ss_dssp EEEECSEECEECCSSTTTTCEEEEEEEES---SCSEEEEEESSTTSSCEEEECC
T ss_pred ceecCCCceEEecCCCCCCEEEEEEEecC---CCEEEEEEECCCCCceEeCccC
Confidence 44455544445554 77766555443 2467889999999999987754
No 39
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=22.22 E-value=1e+02 Score=26.92 Aligned_cols=40 Identities=15% Similarity=0.414 Sum_probs=28.9
Q ss_pred ccEEEEEeEeCCCCCCCCCccccccc-ccCCCCceEEEEEEEecc
Q 022262 255 STQIVAKAVDTAANVQPESVETIWNL-RGVLNTSWHRVQVRVGHS 298 (300)
Q Consensus 255 ~~~i~~RA~D~~G~~QP~~~~~~wN~-~G~~~N~~~~v~v~v~~~ 298 (300)
..+|....+|..|..|+.. ++. .-.....||+|.+.|...
T Consensus 127 ~~~l~~~y~~~~g~~q~v~----F~~~~~L~Dg~WHklalsV~~~ 167 (245)
T 2uur_A 127 TQSVVFSYKGLDGSLQTAA----FSNLSSLFDSQWHKIMIGVERS 167 (245)
T ss_dssp GTEEEEEEEBTTSCEEEEE----ECCCGGGCSSSCEEEEEEEETT
T ss_pred CCEEEEEecCCCCCeeEEE----ecCCccccCCCEEEEEEEEECC
Confidence 4478888889999888832 432 225668899999999654
No 40
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=22.07 E-value=2.3e+02 Score=21.06 Aligned_cols=73 Identities=7% Similarity=-0.067 Sum_probs=42.5
Q ss_pred EecCCCCeecCC--cEEEEEEEEeCCCC-CeEEEEEEcCCCCCcEE------eec--CCCCCCCccccCCCCCceeeEEe
Q 022262 178 CSLEDVNVMKPG--KAKVSGYAVSGGGR-GIERVDISVDGGKNWVE------ASR--YQKTGIPYIADHMSSDKWAWVFF 246 (300)
Q Consensus 178 ~~P~~g~~v~~g--~v~i~G~A~sGgg~-~I~rVeVS~DgG~tW~~------A~l--~~~~~~~~~~~~~~~~~~aW~~W 246 (300)
..|++|++| .. .|+| -|+..-. ...+|.|.-.+|+.+.. .+. +...+ +..
T Consensus 7 s~Pa~ga~v-~aP~~v~L---~Fse~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~---------------~~~ 67 (102)
T 2c9r_A 7 STPAEGSEG-AAPAKIEL---HFSENLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPK---------------TMV 67 (102)
T ss_dssp EESCTTCEE-SCCSCEEE---EESSCCCGGGCEEEEEEEECC-----CEEECEEEEECSSTT---------------EEE
T ss_pred cCCCCcCEE-CCCCEEEE---EeCCCCccCccEEEEECCCCCeeeeccccccccceecCCCC---------------cEE
Confidence 579999999 54 4554 4664221 24678888777888865 332 22211 344
Q ss_pred EEEEEC--CCccEEEEEeEeCCCCC
Q 022262 247 EVIIDI--PHSTQIVAKAVDTAANV 269 (300)
Q Consensus 247 ~~~~~~--~~~~~i~~RA~D~~G~~ 269 (300)
.+.... ++.|+|.=|++.++|..
T Consensus 68 ~~~l~~L~~G~YtV~WrvvS~DGH~ 92 (102)
T 2c9r_A 68 ITPASPLTAGTYKVDWRAVSSDTFP 92 (102)
T ss_dssp EEESSCCCSEEEEEEEEECCTTCCC
T ss_pred EEECCCCCCceEEEEEEEEecCCCc
Confidence 444433 45679999999988874
No 41
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=21.80 E-value=3.4e+02 Score=23.64 Aligned_cols=17 Identities=29% Similarity=0.505 Sum_probs=13.8
Q ss_pred EEEEcCCCCCcEEeecC
Q 022262 208 VDISVDGGKNWVEASRY 224 (300)
Q Consensus 208 VeVS~DgG~tW~~A~l~ 224 (300)
|-.|.|+|+||+.....
T Consensus 144 v~~S~DgG~tW~~~~~~ 160 (327)
T 2xbg_A 144 IYRTKDSGKNWQALVQE 160 (327)
T ss_dssp EEEESSTTSSEEEEECS
T ss_pred EEEEcCCCCCCEEeecC
Confidence 55699999999987653
No 42
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=21.39 E-value=72 Score=30.89 Aligned_cols=20 Identities=30% Similarity=0.606 Sum_probs=16.5
Q ss_pred CeEEEEEEcCCCCCcEEeec
Q 022262 204 GIERVDISVDGGKNWVEASR 223 (300)
Q Consensus 204 ~I~rVeVS~DgG~tW~~A~l 223 (300)
.-..|-+|.|+|+||.+...
T Consensus 236 ~~~~~~~S~DgG~tW~~~~~ 255 (601)
T 1w8o_A 236 GYRKVAVSTDGGHSYGPVTI 255 (601)
T ss_dssp SEEEEEEESSTTSCCCCCEE
T ss_pred CCEEEEEEcCCCCCCCCCee
Confidence 45688899999999998754
No 43
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=20.52 E-value=1.3e+02 Score=23.94 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=20.0
Q ss_pred cEEEEEEEEeCC----CCCeE--EEEEEcCCCCCcEEee
Q 022262 190 KAKVSGYAVSGG----GRGIE--RVDISVDGGKNWVEAS 222 (300)
Q Consensus 190 ~v~i~G~A~sGg----g~~I~--rVeVS~DgG~tW~~A~ 222 (300)
.++|.++++... ...+. +|++|.| |++|+...
T Consensus 80 ~~~I~~v~~~~r~~~~~~~~~~y~I~~S~D-G~~W~~v~ 117 (161)
T 4a41_A 80 SYEINKFTYLPRSGAKNGNITKYELHVSED-GNNFRKIS 117 (161)
T ss_dssp EEEEEEEEEECCSSCCTTCEEEEEEEEESS-SSCEEEEE
T ss_pred CEEEeEEEEEecCCCCCCcEEEEEEEEECC-CCceEEee
Confidence 578888887532 12355 4566655 57998753
Done!