Query 022265
Match_columns 300
No_of_seqs 311 out of 2275
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 09:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022265.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022265hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1665 AFH1-interacting prote 100.0 1.8E-63 3.8E-68 396.9 13.7 296 1-300 1-302 (302)
2 PRK15196 secreted effector pro 100.0 1.1E-28 2.4E-33 219.0 9.1 167 132-298 151-322 (350)
3 PRK15196 secreted effector pro 99.9 8.2E-28 1.8E-32 213.4 6.6 107 191-297 225-331 (350)
4 PF02214 BTB_2: BTB/POZ domain 99.9 1.6E-25 3.4E-30 163.7 5.1 90 11-101 1-93 (94)
5 PRK09718 hypothetical protein; 99.9 1.4E-24 3E-29 193.8 7.5 159 131-291 88-246 (512)
6 KOG2715 Uncharacterized conser 99.9 3.6E-24 7.9E-29 163.9 8.6 105 6-112 18-124 (210)
7 PRK09718 hypothetical protein; 99.9 1.5E-23 3.3E-28 187.2 6.6 151 144-294 91-244 (512)
8 KOG1665 AFH1-interacting prote 99.9 8.7E-24 1.9E-28 169.6 3.3 72 228-299 216-287 (302)
9 KOG2716 Polymerase delta-inter 99.9 8.4E-22 1.8E-26 162.5 10.4 102 6-109 2-104 (230)
10 KOG2714 SETA binding protein S 99.9 6.4E-22 1.4E-26 173.1 9.5 99 4-103 6-105 (465)
11 COG1357 Pentapeptide repeats c 99.9 1.1E-21 2.4E-26 167.8 7.8 83 132-214 53-139 (238)
12 KOG2723 Uncharacterized conser 99.8 2.5E-19 5.3E-24 146.8 8.1 99 5-104 5-104 (221)
13 PRK15197 secreted effector pro 99.8 1.3E-19 2.8E-24 155.7 5.7 29 62-90 35-63 (291)
14 PRK15197 secreted effector pro 99.8 1.7E-19 3.6E-24 155.1 6.0 23 133-155 154-176 (291)
15 PRK15377 E3 ubiquitin-protein 99.8 7.5E-19 1.6E-23 165.1 7.6 9 281-289 315-323 (782)
16 KOG3713 Voltage-gated K+ chann 99.7 3.5E-18 7.6E-23 153.0 8.3 103 6-109 28-140 (477)
17 KOG4390 Voltage-gated A-type K 99.7 5.6E-18 1.2E-22 146.6 4.7 99 5-106 36-136 (632)
18 KOG1545 Voltage-gated shaker-l 99.2 3.6E-12 7.8E-17 109.9 2.6 94 7-102 59-154 (507)
19 smart00225 BTB Broad-Complex, 98.8 1.8E-08 4E-13 71.7 6.4 88 11-102 2-89 (90)
20 KOG3840 Uncharaterized conserv 98.3 7.9E-07 1.7E-11 75.6 5.0 91 3-94 90-183 (438)
21 PF00651 BTB: BTB/POZ domain; 97.6 9.6E-05 2.1E-09 54.9 4.2 95 8-107 10-108 (111)
22 PHA03098 kelch-like protein; P 97.4 0.00047 1E-08 66.1 7.4 92 8-108 11-103 (534)
23 PHA02713 hypothetical protein; 97.0 0.0027 5.8E-08 61.2 8.3 94 10-109 27-122 (557)
24 PHA02790 Kelch-like protein; P 96.4 0.0066 1.4E-07 57.4 6.0 92 13-109 26-119 (480)
25 KOG4441 Proteins containing BT 95.7 0.027 5.8E-07 54.4 6.8 96 10-109 38-133 (571)
26 PF02519 Auxin_inducible: Auxi 87.7 1.4 3.1E-05 32.0 4.9 60 7-70 37-99 (100)
27 KOG4350 Uncharacterized conser 86.0 1.7 3.7E-05 39.5 5.3 99 7-108 43-143 (620)
28 KOG0783 Uncharacterized conser 72.3 3.6 7.7E-05 41.0 3.1 64 10-75 560-634 (1267)
29 TIGR01299 synapt_SV2 synaptic 69.8 1.9 4.2E-05 43.1 0.8 48 203-250 514-561 (742)
30 PLN03219 uncharacterized prote 65.4 12 0.00027 27.4 4.0 59 8-70 41-105 (108)
31 PLN03090 auxin-responsive fami 64.7 14 0.0003 27.0 4.2 61 7-71 41-104 (104)
32 KOG4591 Uncharacterized conser 64.3 7.8 0.00017 31.8 3.1 53 55-107 110-163 (280)
33 TIGR01299 synapt_SV2 synaptic 63.8 2.8 6E-05 42.1 0.6 57 221-277 512-568 (742)
34 PF12926 MOZART2: Mitotic-spin 61.9 4.3 9.3E-05 28.5 1.1 21 56-76 39-59 (88)
35 PLN03220 uncharacterized prote 58.3 25 0.00055 25.6 4.5 58 7-68 36-101 (105)
36 KOG2075 Topoisomerase TOP1-int 51.4 54 0.0012 30.8 6.5 88 17-109 128-216 (521)
37 PTZ00395 Sec24-related protein 51.2 28 0.0006 37.0 5.1 8 53-60 220-227 (1560)
38 PF12541 DUF3737: Protein of u 47.0 23 0.0005 30.5 3.3 27 139-165 101-127 (277)
39 smart00512 Skp1 Found in Skp1 46.4 70 0.0015 23.1 5.5 58 14-75 8-66 (104)
40 PF03931 Skp1_POZ: Skp1 family 45.7 34 0.00074 22.2 3.4 51 15-72 8-59 (62)
41 PRK09716 hypothetical protein; 44.4 9.3 0.0002 32.0 0.6 69 117-185 125-198 (395)
42 PRK09716 hypothetical protein; 30.0 46 0.00099 28.0 2.4 20 51-73 59-78 (395)
43 PRK10984 DNA-binding transcrip 25.4 58 0.0012 24.7 2.1 33 26-58 2-37 (127)
44 PF11822 DUF3342: Domain of un 22.9 88 0.0019 27.9 3.1 82 18-102 14-96 (317)
45 KOG4682 Uncharacterized conser 20.7 3.2E+02 0.0069 25.4 6.1 97 7-109 68-169 (488)
No 1
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=100.00 E-value=1.8e-63 Score=396.86 Aligned_cols=296 Identities=53% Similarity=0.797 Sum_probs=282.4
Q ss_pred CCCCCCCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCC-CcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCC
Q 022265 1 MAKDSDSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRH-TVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLT 79 (300)
Q Consensus 1 ~~~~~~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~-~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~ 79 (300)
|.....++.+|+|||||+.|.|+++||.-|.|+|||+.||+++. +.++++.|.|+|||+|.||++||+|||.|.+|..+
T Consensus 1 ~~t~~~~~~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~lIDRsp~yFepIlNyLr~Gq~~~~s 80 (302)
T KOG1665|consen 1 METSSNLSSMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAVLIDRSPKYFEPILNYLRDGQIPSLS 80 (302)
T ss_pred CCcccChhhhheeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceEEEccCchhhHHHHHHHhcCceeecC
Confidence 45566778999999999999999999998899999999999864 66789999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhchhhHHHHHHHhhhhcccccccccchhHHHHHHHhhccCceeccccccCCCCCCCcCCcccccccc
Q 022265 80 ESKFLELLREAEYYQLLGLIERIHAVINKRKEDNELDTELTRIDIIKCIQSEKVRFRGLNLSGLDLSKLDLSLVDFSYAC 159 (300)
Q Consensus 80 ~~~~~~l~~Ea~f~~l~~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~f~~~~ 159 (300)
++....+++||.||+|..|++.+++ .+++.+..++++++.+++++++..+.+|+|++|+|+||+..||+.++|+.+.
T Consensus 81 ~i~~lgvLeeArff~i~sL~~hle~---~~~e~pe~~~pltR~diik~iqT~elRfqGvNlSGaDLskLDlr~inFkyA~ 157 (302)
T KOG1665|consen 81 DIDCLGVLEEARFFQILSLKDHLED---SRKEVPEVEAPLTRIDIIKCIQTEELRFQGVNLSGADLSKLDLRLINFKYAN 157 (302)
T ss_pred CccHHHHHHHhhHHhhHhHHhHHhh---hccCCCcCCCCccHHHHHHHhhhhheeeecccccccchhhcccccccceehh
Confidence 9999999999999999999999976 5666788899999999999999999999999999999999999999999999
Q ss_pred ccceeccccccccccccccccCCccccccccccccccccccccceeccccccc-----cccccceecCceeecccccccc
Q 022265 160 LRNVFFSRANLQSAKFRDVDAEGSIFHNATLRECEFAGANLRGALLAGANLQS-----ANLQDACMIDCSFCGADLRSAH 234 (300)
Q Consensus 160 l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~l~~~~f~~~~l~~~~~~~~~~~~-----~~f~~~~l~~~~f~~~~l~~~~ 234 (300)
+++|.|+.++|.-|.|+.++++++.|..++|.++.+.-+++.++.+.+++|+. ++++++.+.+|.|.++++++++
T Consensus 158 ls~c~lshtNL~ca~lerADl~gsil~cA~L~~v~~lcaN~eGA~L~gcNfedps~~kaNLeganLkG~~~egs~m~gin 237 (302)
T KOG1665|consen 158 LSNCNLSHTNLQCAKLERADLEGSILHCAILREVEMLCANAEGASLKGCNFEDPSGLKANLEGANLKGADMEGSQMTGIN 237 (302)
T ss_pred hccccccccchhhhhhcccccccchhhhhhhhhhhheecccccccccCcCCCCccchhccccccccccccccccccccce
Confidence 99999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cccccccccccCCCcccCceecCccccCccccCcccCCccccCccccCCccCCceecCCccCCCcC
Q 022265 235 LQTADLTNANLEGANLEGANLKGAKLRNANLKGANLQRAYLRHVNLRDTHLEGAKLDGANLLGAIR 300 (300)
Q Consensus 235 f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~g~i~ 300 (300)
++.++++++++++|+++++++.++++++|+|++++++.+++++++++++.++ +++++..+++||+
T Consensus 238 LrvA~Lknanle~~NLrgA~LaGadLencnlsG~dLQeAnLRg~Nlk~A~~e-~mltplhMsqaiR 302 (302)
T KOG1665|consen 238 LRVATLKNANLENCNLRGANLAGADLENCNLSGADLQEANLRGVNLKEAHME-AMLTPLHMSQAIR 302 (302)
T ss_pred eEeccccccccccCccccccccCCccccCCCCCcchhHhhcccCchhhHHHH-hhccchhhccccC
Confidence 9999999999999999999999999999999999999999999999999999 9999999999985
No 2
>PRK15196 secreted effector protein PipB2; Provisional
Probab=99.95 E-value=1.1e-28 Score=219.00 Aligned_cols=167 Identities=33% Similarity=0.489 Sum_probs=76.9
Q ss_pred CceeccccccCCCCCCCcCCccccccccccceeccccccccccccccccCCc-----cccccccccccccccccccceec
Q 022265 132 KVRFRGLNLSGLDLSKLDLSLVDFSYACLRNVFFSRANLQSAKFRDVDAEGS-----IFHNATLRECEFAGANLRGALLA 206 (300)
Q Consensus 132 ~~~~~~~~l~~~~l~~~~l~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~-----~f~~~~l~~~~f~~~~l~~~~~~ 206 (300)
+.+|++++|.+++|++++|.+++|++++|.++.|.+++|.+++|.+++|.++ +|.++.|.++.|.+++|.+|+|.
T Consensus 151 g~~L~ga~L~ga~L~~a~L~gadLs~a~L~~a~L~~ad~~~a~L~~AnLs~a~f~~a~L~~A~L~~a~l~~A~f~~~nLs 230 (350)
T PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLT 230 (350)
T ss_pred CccccCCccCCCcCCCCCCCCCCcCcCcccccchhhccccCCeecCcchhhhhhccCccccceecccccceeEccCCEEe
Confidence 4455555555555555544444444444444444444444444444444433 33333334444444444444444
Q ss_pred cccccccccccceecCceeecccccccccccccccccccCCCcccCceecCccccCccccCcccCCccccCccccCCccC
Q 022265 207 GANLQSANLQDACMIDCSFCGADLRSAHLQTADLTNANLEGANLEGANLKGAKLRNANLKGANLQRAYLRHVNLRDTHLE 286 (300)
Q Consensus 207 ~~~~~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (300)
+++|.++.|.++.|.+|+|.+++|.+++|.+++|.+++|.+++|.+++|.++.|.+++|.+|+|++++|.+|++++++|.
T Consensus 231 ~a~L~~a~L~~a~l~~anL~gAnL~~a~f~~a~L~~anfs~A~L~~a~f~~a~L~~A~f~~A~L~~Adf~~a~L~gadfs 310 (350)
T PRK15196 231 GANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLA 310 (350)
T ss_pred ccchhhhhhcCcccccccccccccccccccccccccCccccccccccccccceecccccceeeccccEeeCCEecCCCCC
Confidence 44444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred CceecCCccCCC
Q 022265 287 GAKLDGANLLGA 298 (300)
Q Consensus 287 ~~~l~~~~l~g~ 298 (300)
++.|.+++|++|
T Consensus 311 ~A~L~~a~f~~a 322 (350)
T PRK15196 311 EANLNNTCFKDC 322 (350)
T ss_pred CCccCCCccCCC
Confidence 444444444443
No 3
>PRK15196 secreted effector protein PipB2; Provisional
Probab=99.94 E-value=8.2e-28 Score=213.43 Aligned_cols=107 Identities=32% Similarity=0.386 Sum_probs=42.1
Q ss_pred ccccccccccccceeccccccccccccceecCceeecccccccccccccccccccCCCcccCceecCccccCccccCccc
Q 022265 191 RECEFAGANLRGALLAGANLQSANLQDACMIDCSFCGADLRSAHLQTADLTNANLEGANLEGANLKGAKLRNANLKGANL 270 (300)
Q Consensus 191 ~~~~f~~~~l~~~~~~~~~~~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l 270 (300)
.+|+|.+++|.++.|.+++|.+++|.+++|.+++|.+++|.+++|.+++|++++|.+++|.+++|.+|+|++++|.+++|
T Consensus 225 ~~~nLs~a~L~~a~L~~a~l~~anL~gAnL~~a~f~~a~L~~anfs~A~L~~a~f~~a~L~~A~f~~A~L~~Adf~~a~L 304 (350)
T PRK15196 225 DHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNL 304 (350)
T ss_pred cCCEEeccchhhhhhcCcccccccccccccccccccccccccCccccccccccccccceecccccceeeccccEeeCCEe
Confidence 33333333333333333333333333333333333333333333333333333333333333333344444444444444
Q ss_pred CCccccCccccCCccCCceecCCccCC
Q 022265 271 QRAYLRHVNLRDTHLEGAKLDGANLLG 297 (300)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~~~l~g 297 (300)
++++|.++++.+++|++++|.++++.+
T Consensus 305 ~gadfs~A~L~~a~f~~a~l~~~~~~~ 331 (350)
T PRK15196 305 DGADLAEANLNNTCFKDCTLTHLRTED 331 (350)
T ss_pred cCCCCCCCccCCCccCCCCcccceecC
Confidence 444444444444444444444433333
No 4
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=99.92 E-value=1.6e-25 Score=163.71 Aligned_cols=90 Identities=50% Similarity=0.771 Sum_probs=76.3
Q ss_pred EEEeeCCEEEEEehhhhhcCCCCchHHHHhcCC-CCcccCCCCcEEEcCCCCcHHHHHHHHhc-CCCCCCChHHHHHHHH
Q 022265 11 VRLNIGGKKFYTTIDTLTRREPESMLAAMFSGR-HTVFQDSEGYIFVDRDGKHFRHILNWLRD-GAVPTLTESKFLELLR 88 (300)
Q Consensus 11 v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~-~~~~~~~~~~~fiDrdp~~F~~Il~~lr~-g~~~~~~~~~~~~l~~ 88 (300)
|+|||||++|.|+++||.+ +|+|+|++|++.. .+...+++++|||||||.+|++||+|||+ +.++.+.+.....+++
T Consensus 1 V~lNVGG~~f~~~~~tL~~-~~~s~l~~~~~~~~~~~~~~~~~~~fiDRdp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~ 79 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTR-YPDSLLARLFSGERSDDYDDDDGEYFIDRDPELFEYILNYLRTGGKLPIPDEICLEELLE 79 (94)
T ss_dssp EEEEETTEEEEEEHHHHHT-STTSTTTSHHHTGHGGGEETTTTEEEESS-HHHHHHHHHHHHHTSSB---TTS-HHHHHH
T ss_pred CEEEECCEEEEEcHHHHhh-CCCChhhhHHhhccccccCCccceEEeccChhhhhHHHHHHhhcCccCCCCchhHHHHHH
Confidence 7999999999999999996 8999999999975 56677889999999999999999999999 7777777788999999
Q ss_pred HHhhhchhhH-HHH
Q 022265 89 EAEYYQLLGL-IER 101 (300)
Q Consensus 89 Ea~f~~l~~l-~~~ 101 (300)
||+||+|..+ ++.
T Consensus 80 Ea~fy~l~~l~i~~ 93 (94)
T PF02214_consen 80 EAEFYGLDELFIED 93 (94)
T ss_dssp HHHHHT-HHHHBHH
T ss_pred HHHHcCCCccccCC
Confidence 9999999887 554
No 5
>PRK09718 hypothetical protein; Validated
Probab=99.91 E-value=1.4e-24 Score=193.76 Aligned_cols=159 Identities=16% Similarity=0.232 Sum_probs=116.9
Q ss_pred cCceeccccccCCCCCCCcCCccccccccccceeccccccccccccccccCCccccccccccccccccccccceeccccc
Q 022265 131 EKVRFRGLNLSGLDLSKLDLSLVDFSYACLRNVFFSRANLQSAKFRDVDAEGSIFHNATLRECEFAGANLRGALLAGANL 210 (300)
Q Consensus 131 ~~~~~~~~~l~~~~l~~~~l~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~l~~~~f~~~~l~~~~~~~~~~ 210 (300)
++.++.+++|.+++|++|+|++|+|.+|.|.+|.|.++.|.+|+|.+|++.++.|.++.+.++.|.+|.+.+++|.++.+
T Consensus 88 ~~edfs~ldFegCdFsgCdFS~csFs~~dLqDV~FEcA~Lg~CNFsgAdLsgA~FarA~L~rvsFinCKLsGAdFSgA~L 167 (512)
T PRK09718 88 GYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFKCRRLHNVIFIKASGEYVDFSKNIL 167 (512)
T ss_pred cCceeccCEEcccEecCCEEeeceecCCEEEeEEEeccccCccccccCCCCCCccccceecceEEEeccccCcccccCcc
Confidence 45678888888888888888888888888888888888888888888888888777777777777777777777777777
Q ss_pred cccccccceecCceeecccccccccccccccccccCCCcccCceecCccccCccccCcccCCccccCccccCCccCCcee
Q 022265 211 QSANLQDACMIDCSFCGADLRSAHLQTADLTNANLEGANLEGANLKGAKLRNANLKGANLQRAYLRHVNLRDTHLEGAKL 290 (300)
Q Consensus 211 ~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 290 (300)
.++.|.+|.|.+++|.+++|+++.|.+|+|.+|.|.+|+|.. .+++.|.+|+|.+++|.++.|++++|+.|.+++..+
T Consensus 168 k~V~FsdCnL~yAnFsgAnLskA~F~gCDLseAdFSEcdLS~--aKka~F~~cDLt~AdF~qT~LkgVDFSdC~Le~~~~ 245 (512)
T PRK09718 168 DTVDFSQSQLTHSNFRECQIRNSNFDNCYLYASHFTRAEFLS--AKEISFIKSNLTAVMFDHVRISTGNFKDCITEQLEL 245 (512)
T ss_pred CCcEEeeeEecccCCCCCcCCCCEEeCccCCcCCccCCccCC--CCCCEEeCCCCCCCCcCCCcCCCcccccccccceEE
Confidence 776766666666666666666666666666666666666532 367777777777777777777777777777777654
Q ss_pred c
Q 022265 291 D 291 (300)
Q Consensus 291 ~ 291 (300)
+
T Consensus 246 ~ 246 (512)
T PRK09718 246 T 246 (512)
T ss_pred E
Confidence 3
No 6
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.91 E-value=3.6e-24 Score=163.85 Aligned_cols=105 Identities=35% Similarity=0.469 Sum_probs=92.2
Q ss_pred CCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCC--CcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHHH
Q 022265 6 DSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRH--TVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESKF 83 (300)
Q Consensus 6 ~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~--~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~~ 83 (300)
+.+.||+|||||+.|.|++.||. |.|.+++.++.++.. +...|++|+|+|||||.+|..||||||+|++.+-+ ...
T Consensus 18 g~s~wVRlNVGGt~f~TtktTl~-rdp~sFl~rl~q~~~~l~sdrDetGAYlIDRDP~~FgpvLNylRhgklvl~~-l~e 95 (210)
T KOG2715|consen 18 GVSLWVRLNVGGTVFLTTKTTLP-RDPKSFLYRLCQREKDLPSDRDETGAYLIDRDPFYFGPVLNYLRHGKLVLNK-LSE 95 (210)
T ss_pred CceEEEEEecCCEEEEeeeeccc-cCcHHHHHHHHhcccCCCCCccccCceEeccCcchHHHHHHHHhcchhhhhh-hhh
Confidence 44689999999999999999999 599999999999753 66688999999999999999999999999996533 666
Q ss_pred HHHHHHHhhhchhhHHHHHHHhhhhcccc
Q 022265 84 LELLREAEYYQLLGLIERIHAVINKRKED 112 (300)
Q Consensus 84 ~~l~~Ea~f~~l~~l~~~~~~~i~~~~~~ 112 (300)
..+++||+||++..|+..+++.|..+...
T Consensus 96 eGvL~EAefyn~~~li~likd~i~dRd~~ 124 (210)
T KOG2715|consen 96 EGVLEEAEFYNDPSLIQLIKDRIQDRDAM 124 (210)
T ss_pred hccchhhhccCChHHHHHHHHHHHHHhhh
Confidence 78999999999999999999988766533
No 7
>PRK09718 hypothetical protein; Validated
Probab=99.89 E-value=1.5e-23 Score=187.17 Aligned_cols=151 Identities=19% Similarity=0.316 Sum_probs=80.7
Q ss_pred CCCCCcCCccccccccccceeccccccccccccccccCCccccccccccccccccccccceeccccccccccccceecCc
Q 022265 144 DLSKLDLSLVDFSYACLRNVFFSRANLQSAKFRDVDAEGSIFHNATLRECEFAGANLRGALLAGANLQSANLQDACMIDC 223 (300)
Q Consensus 144 ~l~~~~l~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~l~~~~f~~~~l~~~~~~~~~~~~~~f~~~~l~~~ 223 (300)
++++++|.+|.|++|.|.+|+|.+|+|.+|.|.++.+.+|+|.+|+|.++.|.++.+..+.|.+|++.+++|.++.+.++
T Consensus 91 dfs~ldFegCdFsgCdFS~csFs~~dLqDV~FEcA~Lg~CNFsgAdLsgA~FarA~L~rvsFinCKLsGAdFSgA~Lk~V 170 (512)
T PRK09718 91 DLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFKCRRLHNVIFIKASGEYVDFSKNILDTV 170 (512)
T ss_pred eeccCEEcccEecCCEEeeceecCCEEEeEEEeccccCccccccCCCCCCccccceecceEEEeccccCcccccCccCCc
Confidence 34444444444444555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred eeecccccccccccccccccccCCCcccCceecCccc---cCccccCcccCCccccCccccCCccCCceecCCc
Q 022265 224 SFCGADLRSAHLQTADLTNANLEGANLEGANLKGAKL---RNANLKGANLQRAYLRHVNLRDTHLEGAKLDGAN 294 (300)
Q Consensus 224 ~f~~~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 294 (300)
.|.+|.|.+++|.+++|+++.|++|+|.++.|.+|+| +++.|.+|+|.++.|.++++++++|..|.+.+..
T Consensus 171 ~FsdCnL~yAnFsgAnLskA~F~gCDLseAdFSEcdLS~aKka~F~~cDLt~AdF~qT~LkgVDFSdC~Le~~~ 244 (512)
T PRK09718 171 DFSQSQLTHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDHVRISTGNFKDCITEQLE 244 (512)
T ss_pred EEeeeEecccCCCCCcCCCCEEeCccCCcCCccCCccCCCCCCEEeCCCCCCCCcCCCcCCCcccccccccceE
Confidence 5555555555555555555555555555555555555 4555555555555555555555555555554433
No 8
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=99.88 E-value=8.7e-24 Score=169.58 Aligned_cols=72 Identities=44% Similarity=0.597 Sum_probs=48.3
Q ss_pred ccccccccccccccccccCCCcccCceecCccccCccccCcccCCccccCccccCCccCCceecCCccCCCc
Q 022265 228 ADLRSAHLQTADLTNANLEGANLEGANLKGAKLRNANLKGANLQRAYLRHVNLRDTHLEGAKLDGANLLGAI 299 (300)
Q Consensus 228 ~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~g~i 299 (300)
++|.++++++|++.++++++++++.++++++++++|++++|++.++++++|+|++++++.|.+.++++.+|+
T Consensus 216 aNLeganLkG~~~egs~m~ginLrvA~Lknanle~~NLrgA~LaGadLencnlsG~dLQeAnLRg~Nlk~A~ 287 (302)
T KOG1665|consen 216 ANLEGANLKGADMEGSQMTGINLRVATLKNANLENCNLRGANLAGADLENCNLSGADLQEANLRGVNLKEAH 287 (302)
T ss_pred ccccccccccccccccccccceeEeccccccccccCccccccccCCccccCCCCCcchhHhhcccCchhhHH
Confidence 566666666666666666666666666666666666666666666666666666666666666666666553
No 9
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=99.87 E-value=8.4e-22 Score=162.49 Aligned_cols=102 Identities=42% Similarity=0.658 Sum_probs=90.9
Q ss_pred CCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCC-ChHHHH
Q 022265 6 DSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTL-TESKFL 84 (300)
Q Consensus 6 ~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~-~~~~~~ 84 (300)
..++.|+|||||+.|.|+++||++ + +++|+.|++.+.+...++.|.+||||+|.+|..||||||.|.++.+ .+.+..
T Consensus 2 ~~~~~vkLnvGG~~F~Tsk~TLtk-~-dg~fk~m~e~~i~~~~d~s~~IFIDRSpKHF~~ILNfmRdGdv~LPe~~kel~ 79 (230)
T KOG2716|consen 2 SMSETVKLNVGGTIFKTSKSTLTK-F-DGFFKTMLETDIPVEKDESGCIFIDRSPKHFDTILNFMRDGDVDLPESEKELK 79 (230)
T ss_pred CccceEEEecCCeEEEeehhhhhh-h-hhHHHHHhhcCCccccCCcCcEEecCChhHHHHHHHhhhcccccCccchHHHH
Confidence 357899999999999999999997 3 7999999999998889999999999999999999999999998743 334678
Q ss_pred HHHHHHhhhchhhHHHHHHHhhhhc
Q 022265 85 ELLREAEYYQLLGLIERIHAVINKR 109 (300)
Q Consensus 85 ~l~~Ea~f~~l~~l~~~~~~~i~~~ 109 (300)
++++||+||.|.+|++.|+..+...
T Consensus 80 El~~EA~fYlL~~Lv~~C~~~i~~~ 104 (230)
T KOG2716|consen 80 ELLREAEFYLLDGLVELCQSAIARL 104 (230)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhc
Confidence 9999999999999999999866544
No 10
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=99.86 E-value=6.4e-22 Score=173.06 Aligned_cols=99 Identities=38% Similarity=0.555 Sum_probs=88.3
Q ss_pred CCCCCCcEEEeeCCEEEEEehhhhhcCCC-CchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHH
Q 022265 4 DSDSSSMVRLNIGGKKFYTTIDTLTRREP-ESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESK 82 (300)
Q Consensus 4 ~~~~~~~v~lnVgG~~f~~~~~tl~~~~p-~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~ 82 (300)
.+.+.++|+|||||++|+|++.||+- .| +|+|..++++++...+++.+++||||||++|..||||||+|.++...-..
T Consensus 6 ~~~~~~~V~lNVGGriF~Ts~qTL~~-~~~DSffsaL~s~~~~s~~~~~~~iFIDRDPdlFaviLn~LRTg~L~~~g~~~ 84 (465)
T KOG2714|consen 6 MGSSGDRVKLNVGGRIFETSAQTLTW-IPRDSFFSALLSGRINSLKDESGAIFIDRDPDLFAVILNLLRTGDLDASGVFP 84 (465)
T ss_pred cCCCCceEEEecCceEEecchhhhhc-CCcchHHHHHhcCccccccCCCCceEecCCchHHHHHHHHHhcCCCCCccCch
Confidence 45667999999999999999999995 67 99999999999999999999999999999999999999999998755445
Q ss_pred HHHHHHHHhhhchhhHHHHHH
Q 022265 83 FLELLREAEYYQLLGLIERIH 103 (300)
Q Consensus 83 ~~~l~~Ea~f~~l~~l~~~~~ 103 (300)
...+.+||.||++..++..+.
T Consensus 85 ~~llhdEA~fYGl~~llrrl~ 105 (465)
T KOG2714|consen 85 ERLLHDEAMFYGLTPLLRRLT 105 (465)
T ss_pred hhhhhhhhhhcCcHHHHHHhh
Confidence 566677999999999887553
No 11
>COG1357 Pentapeptide repeats containing protein [Function unknown]
Probab=99.85 E-value=1.1e-21 Score=167.79 Aligned_cols=83 Identities=39% Similarity=0.493 Sum_probs=34.8
Q ss_pred CceeccccccCCCCCCCcCCccccc-cccccceeccccccccccccccccCCcccc---ccccccccccccccccceecc
Q 022265 132 KVRFRGLNLSGLDLSKLDLSLVDFS-YACLRNVFFSRANLQSAKFRDVDAEGSIFH---NATLRECEFAGANLRGALLAG 207 (300)
Q Consensus 132 ~~~~~~~~l~~~~l~~~~l~~~~f~-~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~---~~~l~~~~f~~~~l~~~~~~~ 207 (300)
+.+|.++++.+.+++.++|.+++|+ +++|.+++|.+++|.++++.++++.+++|. ++.|.+++|.+++|.+++|.+
T Consensus 53 ~~~~~~~~l~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~l~~a~l~~anl~~~~l~~~~~a~l~~a~l~~a~l~~a~l~~ 132 (238)
T COG1357 53 GLDLSGANLSGADLSNANLRGADLSKGADLSGADLEGANLRGANLSGANLSGANLSNATRANLSGADLSGANLSNANLTG 132 (238)
T ss_pred cCcccccccccchhhhcccccchhccCCCCCCCcccccccCccccCCCcccCCCcccccccCcCCCCCCcCccccCccCc
Confidence 3444444444444444444444444 444444444444444444444444444444 333333333333333333333
Q ss_pred ccccccc
Q 022265 208 ANLQSAN 214 (300)
Q Consensus 208 ~~~~~~~ 214 (300)
+++.++.
T Consensus 133 a~l~~~~ 139 (238)
T COG1357 133 ANLSGAN 139 (238)
T ss_pred CccCCCc
Confidence 3333333
No 12
>KOG2723 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.79 E-value=2.5e-19 Score=146.83 Aligned_cols=99 Identities=40% Similarity=0.640 Sum_probs=86.2
Q ss_pred CCCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCC-CChHHH
Q 022265 5 SDSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPT-LTESKF 83 (300)
Q Consensus 5 ~~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~-~~~~~~ 83 (300)
+..+++|+|||||++|+|+++||++ +|+|+|+.||++..+..++..|.||||||+.+|+|||+|||+..+.. ....+.
T Consensus 5 ~~~~~~v~lnvGG~~ytt~l~tL~~-~~ds~L~~~f~~~~~~~~d~~g~~fIDRDG~lFRyvL~~LRt~~l~lpe~f~e~ 83 (221)
T KOG2723|consen 5 SEYPDVVELNVGGAIYTTRLGTLTK-FPDSMLARMFSGELPLLRDSKGRYFIDRDGFLFRYVLDYLRTKALLLPEDFAEV 83 (221)
T ss_pred cccCCceeeccCCeEEEeeccceee-chHHHHHhhcCCCCCccccccccEEEcCCcchHHHHHHHhcccccccchhhhhH
Confidence 4678999999999999999999996 99999999999977888899999999999999999999999944422 234678
Q ss_pred HHHHHHHhhhchhhHHHHHHH
Q 022265 84 LELLREAEYYQLLGLIERIHA 104 (300)
Q Consensus 84 ~~l~~Ea~f~~l~~l~~~~~~ 104 (300)
..+.+||+||++..+.+.+..
T Consensus 84 ~~L~rEA~f~~l~~~~~~l~~ 104 (221)
T KOG2723|consen 84 ERLVREAEFFQLEAPVTYLLN 104 (221)
T ss_pred HHHHHHHHHHccccHHHHHhc
Confidence 899999999999877765543
No 13
>PRK15197 secreted effector protein PipB; Provisional
Probab=99.78 E-value=1.3e-19 Score=155.73 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=22.3
Q ss_pred cHHHHHHHHhcCCCCCCChHHHHHHHHHH
Q 022265 62 HFRHILNWLRDGAVPTLTESKFLELLREA 90 (300)
Q Consensus 62 ~F~~Il~~lr~g~~~~~~~~~~~~l~~Ea 90 (300)
+-++|+||.-.|.+....+.++.++++.+
T Consensus 35 ~~e~i~nfft~~~~~~~~~~~~~~~~~~~ 63 (291)
T PRK15197 35 ILEWFVNFFTCGGVRRSNERCFREVIGKL 63 (291)
T ss_pred HHHHHHHhccccchhhhhHHHHHHHHHHH
Confidence 45899999999999776777888775543
No 14
>PRK15197 secreted effector protein PipB; Provisional
Probab=99.78 E-value=1.7e-19 Score=155.05 Aligned_cols=23 Identities=39% Similarity=0.551 Sum_probs=9.3
Q ss_pred ceeccccccCCCCCCCcCCcccc
Q 022265 133 VRFRGLNLSGLDLSKLDLSLVDF 155 (300)
Q Consensus 133 ~~~~~~~l~~~~l~~~~l~~~~f 155 (300)
.+|++++|.+++|++.+|.+++|
T Consensus 154 ldL~g~DLs~adL~gadLsgadL 176 (291)
T PRK15197 154 LNLRGVNLAHKDFQGEDLSDIDA 176 (291)
T ss_pred ccCCCCCCCCCCCCCCcCCCCcc
Confidence 34444444444444333333333
No 15
>PRK15377 E3 ubiquitin-protein ligase SopA; Provisional
Probab=99.76 E-value=7.5e-19 Score=165.09 Aligned_cols=9 Identities=22% Similarity=0.209 Sum_probs=3.4
Q ss_pred cCCccCCce
Q 022265 281 RDTHLEGAK 289 (300)
Q Consensus 281 ~~~~~~~~~ 289 (300)
....+.|+.
T Consensus 315 ~~i~l~g~~ 323 (782)
T PRK15377 315 PSVSLGGNF 323 (782)
T ss_pred cccccCcce
Confidence 333333333
No 16
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=99.74 E-value=3.5e-18 Score=153.05 Aligned_cols=103 Identities=23% Similarity=0.298 Sum_probs=88.3
Q ss_pred CCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCC--------CCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCC
Q 022265 6 DSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGR--------HTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPT 77 (300)
Q Consensus 6 ~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~--------~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~ 77 (300)
..++.|+|||||++|.+.++||.+ +|.++|+++.... ...|....+||||||+|.+|.+||+|||+|+++.
T Consensus 28 ~~~~~i~lNVGG~r~~l~~~tL~~-~P~TRL~rL~~~~~~~~~l~~cDdyd~~~~EyfFDR~P~~F~~Vl~fYrtGkLH~ 106 (477)
T KOG3713|consen 28 ALDRRVRLNVGGTRHELYWSTLKR-FPLTRLGRLADCNSHEERLELCDDYDPVTNEYFFDRHPGAFAYVLNFYRTGKLHV 106 (477)
T ss_pred CcCcEEEEeeCCeeEEehHHHHhh-CchhHHHHHHhcccchhhhhhccccCcccCeeeeccChHHHHHHHHHHhcCeecc
Confidence 345699999999999999999996 9999999999844 2446677899999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhhchhh--HHHHHHHhhhhc
Q 022265 78 LTESKFLELLREAEYYQLLG--LIERIHAVINKR 109 (300)
Q Consensus 78 ~~~~~~~~l~~Ea~f~~l~~--l~~~~~~~i~~~ 109 (300)
+.+.|...+.+|.+||++.. +...|......+
T Consensus 107 p~~vC~~~F~eEL~yWgI~~~~le~CC~~~~~~~ 140 (477)
T KOG3713|consen 107 PADVCPLSFEEELDYWGIDEAHLESCCWMRYRQR 140 (477)
T ss_pred ccccchHHHHHHHHHhCCChhhhhHHhHHHHhhc
Confidence 99999999999999999975 455665544333
No 17
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=99.71 E-value=5.6e-18 Score=146.61 Aligned_cols=99 Identities=27% Similarity=0.476 Sum_probs=84.3
Q ss_pred CCCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHHHH
Q 022265 5 SDSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESKFL 84 (300)
Q Consensus 5 ~~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~~~ 84 (300)
+..++.++|||.|++|+|++.||.+ ||+++|++- ++.-.|..+.|+||+||||++|+|||+|||+|+++.+...|..
T Consensus 36 ~r~De~lvlNvSGrRFeTWknTLer-yPdTLLGSs--EkeFFy~~dt~eYFFDRDPdiFRhvLnFYRTGkLHyPR~ECi~ 112 (632)
T KOG4390|consen 36 KRQDELLVLNVSGRRFETWKNTLER-YPDTLLGSS--EKEFFYDEDTGEYFFDRDPDIFRHVLNFYRTGKLHYPRHECIS 112 (632)
T ss_pred hccCcEEEEeccccchhHHHhHHHh-CchhhhCCc--chheeecCCcccccccCChHHHHHHHHHhhcCcccCchHHHHH
Confidence 4568999999999999999999995 999999953 2334466778999999999999999999999999999999999
Q ss_pred HHHHHHhhhchhh-HH-HHHHHhh
Q 022265 85 ELLREAEYYQLLG-LI-ERIHAVI 106 (300)
Q Consensus 85 ~l~~Ea~f~~l~~-l~-~~~~~~i 106 (300)
...+|..||++.. ++ ..|.+..
T Consensus 113 AyDeELaF~Gl~PeligDCCyEeY 136 (632)
T KOG4390|consen 113 AYDEELAFYGLVPELIGDCCYEEY 136 (632)
T ss_pred HhhhhhhHhcccHHHHhhhhhHHH
Confidence 9999999999965 43 4455444
No 18
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=99.23 E-value=3.6e-12 Score=109.94 Aligned_cols=94 Identities=28% Similarity=0.422 Sum_probs=78.8
Q ss_pred CCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCC-CCCChHHHHH
Q 022265 7 SSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAV-PTLTESKFLE 85 (300)
Q Consensus 7 ~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~-~~~~~~~~~~ 85 (300)
.+++|+|||.|-+|+|..+||.+ +|+|+|+.--. +...+.+-.++||+||+...|..||+||+.|.. ..+....+.-
T Consensus 59 ~~ervvINisGlRFeTql~TL~q-fP~TLLGDp~k-R~rfFdplrNEyFFDRnRpSFdaILYyYQSGGRlrRPvnVPlDi 136 (507)
T KOG1545|consen 59 CCERVVINISGLRFETQLKTLAQ-FPNTLLGDPAK-RMRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDI 136 (507)
T ss_pred cccEEEEEeccceehHHHHHHhh-CchhhcCCHHH-hcccccccchhhcccCCCCccceEEEEeecCceecCCccccHHH
Confidence 45999999999999999999996 99999997655 345566777899999999999999999998765 5566778888
Q ss_pred HHHHHhhhchhh-HHHHH
Q 022265 86 LLREAEYYQLLG-LIERI 102 (300)
Q Consensus 86 l~~Ea~f~~l~~-l~~~~ 102 (300)
+.+|..||++.. ..+..
T Consensus 137 F~eEirFyqlG~eame~F 154 (507)
T KOG1545|consen 137 FLEEIRFYQLGDEAMERF 154 (507)
T ss_pred HHHHHHHHHhhHHHHHHH
Confidence 999999999964 33444
No 19
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=98.77 E-value=1.8e-08 Score=71.69 Aligned_cols=88 Identities=32% Similarity=0.468 Sum_probs=70.5
Q ss_pred EEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHHHHHHHHHH
Q 022265 11 VRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESKFLELLREA 90 (300)
Q Consensus 11 v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~~~~l~~Ea 90 (300)
|+|.|||+.|.+++..|..+ ..+|..|+.+.... .......+.|.+|..|+.+|+|++++.++.... ....+++.|
T Consensus 2 v~i~v~~~~~~~h~~iL~~~--s~~f~~~~~~~~~~-~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~-~~~~l~~~a 77 (90)
T smart00225 2 VTLVVGGKKFKAHKAVLAAC--SPYFKALFSGDFKE-SKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEE-NVEELLELA 77 (90)
T ss_pred eEEEECCEEEehHHHHHhhc--CHHHHHHHcCCCcc-CCCCEEEecCCCHHHHHHHHHeecCceeecCHH-HHHHHHHHH
Confidence 67999999999999999863 57999999864321 123344566899999999999999999865443 778999999
Q ss_pred hhhchhhHHHHH
Q 022265 91 EYYQLLGLIERI 102 (300)
Q Consensus 91 ~f~~l~~l~~~~ 102 (300)
++|+++.+.+.+
T Consensus 78 ~~~~~~~l~~~c 89 (90)
T smart00225 78 DYLQIPGLVELC 89 (90)
T ss_pred HHHCcHHHHhhh
Confidence 999999888765
No 20
>KOG3840 consensus Uncharaterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=98.31 E-value=7.9e-07 Score=75.63 Aligned_cols=91 Identities=22% Similarity=0.327 Sum_probs=75.8
Q ss_pred CCCCCCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCc-ccCCCCcEEEc--CCCCcHHHHHHHHhcCCCCCCC
Q 022265 3 KDSDSSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTV-FQDSEGYIFVD--RDGKHFRHILNWLRDGAVPTLT 79 (300)
Q Consensus 3 ~~~~~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~-~~~~~~~~fiD--rdp~~F~~Il~~lr~g~~~~~~ 79 (300)
..+...++|.+-|.|++|.+++..|+. .|.+|++.||.+.... ...+.|+|=+- -...+|+.||+||++|.+..++
T Consensus 90 ~~pg~~~~~t~lvd~~rf~v~q~llt~-~p~Tmlg~mf~~g~~f~~pNErgEyeVAdGi~s~vFRAILdYYksG~iRCP~ 168 (438)
T KOG3840|consen 90 CSPGEGDKVCLLVDQTRFLVSQRLLTS-KPDTMLGRMFSMGADLVSPNERDEFEVADGMTSSCFRAILDYYQSGTMRCPS 168 (438)
T ss_pred CCCCCCcceEEEeeeEEEEeeeeeecC-CcchhhhhhhcccccccCCCcCCceehhcchhHHHHHHHHHHHhcCceeCCC
Confidence 456778999999999999999999996 8999999999875432 35677887662 4567999999999999998888
Q ss_pred hHHHHHHHHHHhhhc
Q 022265 80 ESKFLELLREAEYYQ 94 (300)
Q Consensus 80 ~~~~~~l~~Ea~f~~ 94 (300)
.....+|.+.++|.-
T Consensus 169 ~vSvpELrEACDYLl 183 (438)
T KOG3840|consen 169 SVSVSELREACDYLL 183 (438)
T ss_pred CCchHHHHhhcceEE
Confidence 888888888887743
No 21
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=97.56 E-value=9.6e-05 Score=54.91 Aligned_cols=95 Identities=23% Similarity=0.385 Sum_probs=71.8
Q ss_pred CCcEEEeeC-CEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCC--cE-EEcCCCCcHHHHHHHHhcCCCCCCChHHH
Q 022265 8 SSMVRLNIG-GKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEG--YI-FVDRDGKHFRHILNWLRDGAVPTLTESKF 83 (300)
Q Consensus 8 ~~~v~lnVg-G~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~--~~-fiDrdp~~F~~Il~~lr~g~~~~~~~~~~ 83 (300)
..-|+|.|| |+.|.+.+..|..+ ..+|..|+.+.. ..+.+ .+ +-|-+|..|+.+++|+.+|.++.......
T Consensus 10 ~~D~~i~v~d~~~~~vhk~iL~~~--S~~F~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~ 84 (111)
T PF00651_consen 10 FSDVTIRVGDGKTFYVHKNILAAR--SPYFRNLFEGSK---FKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINSDENV 84 (111)
T ss_dssp S--EEEEETTTEEEEE-HHHHHHH--BHHHHHHHTTTT---STTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-TTTH
T ss_pred CCCEEEEECCCEEEeechhhhhcc--chhhhhcccccc---cccccccccccccccccccccccccccCCcccCCHHHHH
Confidence 345789999 99999999999865 569999998751 11222 34 34688999999999999998854335567
Q ss_pred HHHHHHHhhhchhhHHHHHHHhhh
Q 022265 84 LELLREAEYYQLLGLIERIHAVIN 107 (300)
Q Consensus 84 ~~l~~Ea~f~~l~~l~~~~~~~i~ 107 (300)
..+++-|++|+++.|.+.+...+.
T Consensus 85 ~~ll~lA~~~~~~~L~~~~~~~l~ 108 (111)
T PF00651_consen 85 EELLELADKLQIPELKKACEKFLQ 108 (111)
T ss_dssp HHHHHHHHHTTBHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 889999999999999998876553
No 22
>PHA03098 kelch-like protein; Provisional
Probab=97.39 E-value=0.00047 Score=66.07 Aligned_cols=92 Identities=20% Similarity=0.238 Sum_probs=72.7
Q ss_pred CCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEE-cCCCCcHHHHHHHHhcCCCCCCChHHHHHH
Q 022265 8 SSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFV-DRDGKHFRHILNWLRDGAVPTLTESKFLEL 86 (300)
Q Consensus 8 ~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fi-Drdp~~F~~Il~~lr~g~~~~~~~~~~~~l 86 (300)
+-.|++.|+|+.|.++|.-|..+ ..+|..||++... ..++-+ + ++..|+.||+|+.+|++.. ......++
T Consensus 11 Dv~l~~~~~~~~~~~Hk~vLaa~--S~yF~~mf~~~~~-----~~~i~l~~-~~~~~~~~l~y~Ytg~~~i-~~~~~~~l 81 (534)
T PHA03098 11 DESIIIVNGGGIIKVHKIILSSS--SEYFKKMFKNNFK-----ENEINLNI-DYDSFNEVIKYIYTGKINI-TSNNVKDI 81 (534)
T ss_pred CEEEEEEcCCEEEEeHHHHHHhh--hHHHHHHHhCCCC-----CceEEecC-CHHHHHHHHHHhcCCceEE-cHHHHHHH
Confidence 44556667999999999999964 4599999987543 234444 5 9999999999999999964 45568889
Q ss_pred HHHHhhhchhhHHHHHHHhhhh
Q 022265 87 LREAEYYQLLGLIERIHAVINK 108 (300)
Q Consensus 87 ~~Ea~f~~l~~l~~~~~~~i~~ 108 (300)
+.-|.+|+++.+.+.|.+.+.+
T Consensus 82 l~~A~~l~~~~l~~~C~~~l~~ 103 (534)
T PHA03098 82 LSIANYLIIDFLINLCINYIIK 103 (534)
T ss_pred HHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999988887776644
No 23
>PHA02713 hypothetical protein; Provisional
Probab=97.01 E-value=0.0027 Score=61.18 Aligned_cols=94 Identities=16% Similarity=0.287 Sum_probs=73.2
Q ss_pred cEEEeeC-CEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcE-EEcCCCCcHHHHHHHHhcCCCCCCChHHHHHHH
Q 022265 10 MVRLNIG-GKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYI-FVDRDGKHFRHILNWLRDGAVPTLTESKFLELL 87 (300)
Q Consensus 10 ~v~lnVg-G~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~-fiDrdp~~F~~Il~~lr~g~~~~~~~~~~~~l~ 87 (300)
-|+|-|+ |+.|...|.-|... ..+|..||++..... ...+++ .-+-++..|+.||+|+.+|.+ .......++
T Consensus 27 DV~L~v~~~~~f~~Hr~vLaa~--S~YF~amF~~~~~e~-~~~~~v~l~~v~~~~~~~ll~y~Yt~~i---~~~nv~~ll 100 (557)
T PHA02713 27 DVIITIGDGEEIKAHKTILAAG--SKYFRTLFTTPMIIR-DLVTRVNLQMFDKDAVKNIVQYLYNRHI---SSMNVIDVL 100 (557)
T ss_pred CEEEEeCCCCEEeehHHHHhhc--CHHHHHHhcCCchhh-ccCceEEeccCCHHHHHHHHHHhcCCCC---CHHHHHHHH
Confidence 4778998 89999999999854 469999998643211 112334 447899999999999999975 456788899
Q ss_pred HHHhhhchhhHHHHHHHhhhhc
Q 022265 88 REAEYYQLLGLIERIHAVINKR 109 (300)
Q Consensus 88 ~Ea~f~~l~~l~~~~~~~i~~~ 109 (300)
.-|.++++..+.+.|.+.+...
T Consensus 101 ~aA~~lqi~~l~~~C~~~l~~~ 122 (557)
T PHA02713 101 KCADYLLIDDLVTDCESYIKDY 122 (557)
T ss_pred HHHHHHCHHHHHHHHHHHHHhh
Confidence 9999999999998877766543
No 24
>PHA02790 Kelch-like protein; Provisional
Probab=96.39 E-value=0.0066 Score=57.42 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=68.6
Q ss_pred EeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEE--EcCCCCcHHHHHHHHhcCCCCCCChHHHHHHHHHH
Q 022265 13 LNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIF--VDRDGKHFRHILNWLRDGAVPTLTESKFLELLREA 90 (300)
Q Consensus 13 lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~f--iDrdp~~F~~Il~~lr~g~~~~~~~~~~~~l~~Ea 90 (300)
|-|.|..|..+|--|..- ..+|..||++.....++ .... ++-+|..++.||+|+.+|++.+ .......++..|
T Consensus 26 ~~~~~~~~~~HR~VLAa~--S~YFraMF~~~~~Es~~--~v~~~~~~v~~~~l~~lldy~YTg~l~i-t~~nV~~ll~aA 100 (480)
T PHA02790 26 IEAIGGNIIVNSTILKKL--SPYFRTHLRQKYTKNKD--PVTRVCLDLDIHSLTSIVIYSYTGKVYI-DSHNVVNLLRAS 100 (480)
T ss_pred EEEcCcEEeeehhhhhhc--CHHHHHHhcCCcccccc--ceEEEecCcCHHHHHHHHHhheeeeEEE-ecccHHHHHHHH
Confidence 457788999999999853 46999999875432221 2222 3899999999999999999965 344577888888
Q ss_pred hhhchhhHHHHHHHhhhhc
Q 022265 91 EYYQLLGLIERIHAVINKR 109 (300)
Q Consensus 91 ~f~~l~~l~~~~~~~i~~~ 109 (300)
.++++..+.+.|.+-+...
T Consensus 101 ~~Lqi~~v~~~C~~fL~~~ 119 (480)
T PHA02790 101 ILTSVEFIIYTCINFILRD 119 (480)
T ss_pred HHhChHHHHHHHHHHHHhh
Confidence 8888888887776665443
No 25
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.73 E-value=0.027 Score=54.39 Aligned_cols=96 Identities=18% Similarity=0.271 Sum_probs=76.6
Q ss_pred cEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHHHHHHHHH
Q 022265 10 MVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESKFLELLRE 89 (300)
Q Consensus 10 ~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~~~~l~~E 89 (300)
-|+|-||++.|...|--|+.. ..+|..||++.... ......-+.+-||..++.+++|..+|.+.+ .+....++++.
T Consensus 38 Dv~L~v~~~~~~aHR~VLAa~--S~YFraMFt~~l~e-~~~~~i~l~~v~~~~l~~ll~y~Yt~~i~i-~~~nVq~ll~a 113 (571)
T KOG4441|consen 38 DVTLLVGDREFPAHRVVLAAC--SPYFRAMFTSGLKE-SKQKEINLEGVDPETLELLLDYAYTGKLEI-SEDNVQELLEA 113 (571)
T ss_pred eEEEEECCeeechHHHHHHhc--cHHHHHHhcCCccc-ccceEEEEecCCHHHHHHHHHHhhcceEEe-chHhHHHHHHH
Confidence 478999999999999999854 46999999964322 122233456799999999999999999964 67788999999
Q ss_pred HhhhchhhHHHHHHHhhhhc
Q 022265 90 AEYYQLLGLIERIHAVINKR 109 (300)
Q Consensus 90 a~f~~l~~l~~~~~~~i~~~ 109 (300)
|.++++..+.+.|.+.+.+.
T Consensus 114 A~~lQi~~v~~~C~~fL~~~ 133 (571)
T KOG4441|consen 114 ASLLQIPEVVDACCEFLESQ 133 (571)
T ss_pred HHHhhhHHHHHHHHHHHHhc
Confidence 99999999998877766543
No 26
>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []. Proteins from this ARG7 auxin responsive genes family have no identified functional role [].
Probab=87.67 E-value=1.4 Score=32.03 Aligned_cols=60 Identities=18% Similarity=0.347 Sum_probs=45.3
Q ss_pred CCCcEEEeeCC--EEEEEehhhhhcCCCCchHHHHhcCCCCc-ccCCCCcEEEcCCCCcHHHHHHHH
Q 022265 7 SSSMVRLNIGG--KKFYTTIDTLTRREPESMLAAMFSGRHTV-FQDSEGYIFVDRDGKHFRHILNWL 70 (300)
Q Consensus 7 ~~~~v~lnVgG--~~f~~~~~tl~~~~p~s~l~~~~~~~~~~-~~~~~~~~fiDrdp~~F~~Il~~l 70 (300)
+..-+...||. ++|.+..+.|. +| +|..++..-... --+.+|.+.|-+|...|++||..+
T Consensus 37 p~G~~~VyVG~~~~Rfvvp~~~L~--hp--~f~~LL~~aeeEfG~~~~G~l~iPC~~~~Fe~~l~~l 99 (100)
T PF02519_consen 37 PKGHFAVYVGEERRRFVVPVSYLN--HP--LFQELLEQAEEEFGFDQDGPLTIPCDVVLFEHLLWLL 99 (100)
T ss_pred CCCeEEEEeCccceEEEechHHcC--ch--hHHHHHHHHhhhcCcCCCCcEEeeCCHHHHHHHHHHh
Confidence 35667888986 89999999996 55 788777642211 123378999999999999999876
No 27
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=86.00 E-value=1.7 Score=39.47 Aligned_cols=99 Identities=19% Similarity=0.293 Sum_probs=65.5
Q ss_pred CCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEcCCCCcHHHHHHHHhcCCCC--CCChHHHH
Q 022265 7 SSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVDRDGKHFRHILNWLRDGAVP--TLTESKFL 84 (300)
Q Consensus 7 ~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~--~~~~~~~~ 84 (300)
...-|++-|..++|-..|--|+-| .++|..|.=+...-.. ....-.=+-+.+.|+.+|.|+.+|++. ..++....
T Consensus 43 ~y~DVtfvve~~rfpAHRvILAaR--s~yFRAlLYgGm~Es~-q~~ipLq~t~~eAF~~lLrYiYtg~~~l~~~~ed~ll 119 (620)
T KOG4350|consen 43 DYSDVTFVVEDTRFPAHRVILAAR--SSYFRALLYGGMQESH-QQLIPLQETNSEAFRALLRYIYTGKIDLAGVEEDILL 119 (620)
T ss_pred cccceEEEEeccccchhhhhHHHH--HHHHHHHHhhhhhhhh-hcccccccccHHHHHHHHHHHhhcceecccchHHHHH
Confidence 345688999999999999999855 6788888754321100 111122345578999999999999983 34555556
Q ss_pred HHHHHHhhhchhhHHHHHHHhhhh
Q 022265 85 ELLREAEYYQLLGLIERIHAVINK 108 (300)
Q Consensus 85 ~l~~Ea~f~~l~~l~~~~~~~i~~ 108 (300)
.++.=|.-|++.+|...+.+-+.+
T Consensus 120 d~LslAh~Ygf~~Le~aiSeYl~~ 143 (620)
T KOG4350|consen 120 DYLSLAHRYGFIQLETAISEYLKE 143 (620)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHH
Confidence 666666667776666655554433
No 28
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=72.29 E-value=3.6 Score=40.95 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=46.8
Q ss_pred cEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCC------CcccC-CC---CcE-EEcCCCCcHHHHHHHHhcCCC
Q 022265 10 MVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRH------TVFQD-SE---GYI-FVDRDGKHFRHILNWLRDGAV 75 (300)
Q Consensus 10 ~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~------~~~~~-~~---~~~-fiDrdp~~F~~Il~~lr~g~~ 75 (300)
-|++.|||..|...+--|..| .++|.+++-... .+|.. .+ -.+ +-|-.|..|++||+|+.+...
T Consensus 560 DVtf~vg~~~F~aHKfIl~~r--s~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~mfe~lL~~iYtdt~ 634 (1267)
T KOG0783|consen 560 DVTFYVGTSMFHAHKFILCAR--SSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPLMFEILLHYIYTDTL 634 (1267)
T ss_pred eEEEEecCeecccceEEEEec--cHHHHHHHHhhccccccceeeeecccccCceeeeccCCHHHHHHHHHHHhcccc
Confidence 489999999999999888865 568888885422 12221 11 123 446899999999999999754
No 29
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=69.84 E-value=1.9 Score=43.12 Aligned_cols=48 Identities=13% Similarity=0.375 Sum_probs=20.9
Q ss_pred ceeccccccccccccceecCceeecccccccccccccccccccCCCcc
Q 022265 203 ALLAGANLQSANLQDACMIDCSFCGADLRSAHLQTADLTNANLEGANL 250 (300)
Q Consensus 203 ~~~~~~~~~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f~~~~~ 250 (300)
.+|.+..+....|.++.|+.|.|.+.+-.++-|+.|++.+..|.+.++
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 514 DKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred chhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 334444444444444444444444444444444444444443333333
No 30
>PLN03219 uncharacterized protein; Provisional
Probab=65.36 E-value=12 Score=27.38 Aligned_cols=59 Identities=20% Similarity=0.373 Sum_probs=43.1
Q ss_pred CCcEEEeeCC----EEEEEehhhhhcCCCCchHHHHhcCCC--CcccCCCCcEEEcCCCCcHHHHHHHH
Q 022265 8 SSMVRLNIGG----KKFYTTIDTLTRREPESMLAAMFSGRH--TVFQDSEGYIFVDRDGKHFRHILNWL 70 (300)
Q Consensus 8 ~~~v~lnVgG----~~f~~~~~tl~~~~p~s~l~~~~~~~~--~~~~~~~~~~fiDrdp~~F~~Il~~l 70 (300)
...+.+.||. +||.+..+-|. .| +|..|+..-. --+....|.+-|-+|...|++||..-
T Consensus 41 kGh~aVYVG~~~E~kRFvVPi~yL~--hP--~F~~LL~~AeEEfGf~~~~G~L~IPCd~~~F~~ll~~~ 105 (108)
T PLN03219 41 KGHVAVYVGEQMEKKRFVVPISYLN--HP--LFREFLNRAEEECGFHHSMGGLTIPCREESFLHLITSH 105 (108)
T ss_pred CCeEEEEECCCCCceEEEEEHHHcC--Ch--HHHHHHHHHHHHhCCCCCCCCEEEeCCHHHHHHHHHhh
Confidence 3456778885 89999999996 56 7777775321 11223458999999999999999753
No 31
>PLN03090 auxin-responsive family protein; Provisional
Probab=64.70 E-value=14 Score=27.04 Aligned_cols=61 Identities=16% Similarity=0.321 Sum_probs=43.0
Q ss_pred CCCcEEEeeCC--EEEEEehhhhhcCCCCchHHHHhcCCCCcc-cCCCCcEEEcCCCCcHHHHHHHHh
Q 022265 7 SSSMVRLNIGG--KKFYTTIDTLTRREPESMLAAMFSGRHTVF-QDSEGYIFVDRDGKHFRHILNWLR 71 (300)
Q Consensus 7 ~~~~v~lnVgG--~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~-~~~~~~~fiDrdp~~F~~Il~~lr 71 (300)
+...+.+.||. ++|.+..+-|. +| +|..++......+ -+.+|.+-|-+|...|++++..+|
T Consensus 41 pkG~~aVyVG~~~~RfvVp~~~L~--hP--~F~~LL~~aeeEfGf~~~G~L~IPC~~~~Fe~ll~~i~ 104 (104)
T PLN03090 41 PKGHFPVYVGENRSRYIVPISFLT--HP--EFQSLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMIR 104 (104)
T ss_pred CCCcEEEEECCCCEEEEEEHHHcC--CH--HHHHHHHHHHHHhCCCCCCcEEEeCCHHHHHHHHHHhC
Confidence 34566678875 59999988886 56 7777765322111 123578999999999999998764
No 32
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=64.33 E-value=7.8 Score=31.81 Aligned_cols=53 Identities=25% Similarity=0.318 Sum_probs=42.5
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCC-hHHHHHHHHHHhhhchhhHHHHHHHhhh
Q 022265 55 FVDRDGKHFRHILNWLRDGAVPTLT-ESKFLELLREAEYYQLLGLIERIHAVIN 107 (300)
Q Consensus 55 fiDrdp~~F~~Il~~lr~g~~~~~~-~~~~~~l~~Ea~f~~l~~l~~~~~~~i~ 107 (300)
.=|-||+.|...+.|+.+..+.... +.-+.++++-|.-|++..|.+.|.+-+.
T Consensus 110 ~dDad~Ea~~t~iRWIYTDEidfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~ 163 (280)
T KOG4591|consen 110 LDDADFEAFHTAIRWIYTDEIDFKEDDEFLLELCELANRFQLELLKERCEKGLG 163 (280)
T ss_pred ccccCHHHHHHhheeeeccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3478999999999999999996544 4446788888999999888888876543
No 33
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=63.84 E-value=2.8 Score=42.05 Aligned_cols=57 Identities=7% Similarity=0.187 Sum_probs=24.5
Q ss_pred cCceeecccccccccccccccccccCCCcccCceecCccccCccccCcccCCccccC
Q 022265 221 IDCSFCGADLRSAHLQTADLTNANLEGANLEGANLKGAKLRNANLKGANLQRAYLRH 277 (300)
Q Consensus 221 ~~~~f~~~~l~~~~f~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 277 (300)
.++.|.+..++...|.++.|++|.|++..-.++.|+.|++.+..|.+.++...++.+
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 568 (742)
T TIGR01299 512 DNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFID 568 (742)
T ss_pred ccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhh
Confidence 334444444444444444444444444444444444444444444444333333333
No 34
>PF12926 MOZART2: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR024332 The MOZART2 family of proteins (also known as FAM128 and Mitotic-spindle organizing protein 2) operate as part of the gamma-tubulin ring complex, gamma-TuRC, one of the complexes necessary for chromosome segregation. This complex is located at centrosomes and mediates the formation of bipolar spindles in mitosis; it consists of six subunits. However, unlike the other four known subunits, the MOZART proteins, both 1 and 2, do not carry the conserved 'Spc97-Spc98' GCP domain, so the TUBGCP nomenclature cannot be used for it. The exact function of MOZART2 is not clear [].
Probab=61.90 E-value=4.3 Score=28.50 Aligned_cols=21 Identities=43% Similarity=0.542 Sum_probs=18.1
Q ss_pred EcCCCCcHHHHHHHHhcCCCC
Q 022265 56 VDRDGKHFRHILNWLRDGAVP 76 (300)
Q Consensus 56 iDrdp~~F~~Il~~lr~g~~~ 76 (300)
+.-||++|+.||+.||-+.-|
T Consensus 39 v~~dp~VFriildLL~~nVsP 59 (88)
T PF12926_consen 39 VPMDPEVFRIILDLLRLNVSP 59 (88)
T ss_pred CCcChHHHHHHHHHHHcCCCH
Confidence 567899999999999997665
No 35
>PLN03220 uncharacterized protein; Provisional
Probab=58.25 E-value=25 Score=25.63 Aligned_cols=58 Identities=19% Similarity=0.324 Sum_probs=41.6
Q ss_pred CCCcEEEeeCC------EEEEEehhhhhcCCCCchHHHHhcCCC--CcccCCCCcEEEcCCCCcHHHHHH
Q 022265 7 SSSMVRLNIGG------KKFYTTIDTLTRREPESMLAAMFSGRH--TVFQDSEGYIFVDRDGKHFRHILN 68 (300)
Q Consensus 7 ~~~~v~lnVgG------~~f~~~~~tl~~~~p~s~l~~~~~~~~--~~~~~~~~~~fiDrdp~~F~~Il~ 68 (300)
+...+.+.||+ ++|.+..+-|. .| .|..++..-. --+...+|.+-|=+|...|+.++.
T Consensus 36 PkGh~aVyVGe~~~~e~kRFVVPv~yL~--hP--~F~~LL~~AeEEfGf~~~~G~L~IPCd~~~F~~ll~ 101 (105)
T PLN03220 36 PKGHVAVYVGEQIEMEKKRFVVPISFLN--HP--SFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIA 101 (105)
T ss_pred CCCeEEEEECCCCCccceEEEEEHHHcC--Ch--HHHHHHHHHHHHhCCCCCCCCEEeeCCHHHHHHHHH
Confidence 33456778885 89999999996 56 7777765311 112334689999999999998874
No 36
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=51.40 E-value=54 Score=30.83 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=60.1
Q ss_pred CEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEE-cCCCCcHHHHHHHHhcCCCCCCChHHHHHHHHHHhhhch
Q 022265 17 GKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFV-DRDGKHFRHILNWLRDGAVPTLTESKFLELLREAEYYQL 95 (300)
Q Consensus 17 G~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fi-Drdp~~F~~Il~~lr~g~~~~~~~~~~~~l~~Ea~f~~l 95 (300)
-+++-.++-.|. .....|..|+.+.+.- +..+++-+ |-+|..|...|.|+....+.. .......++.-|+-|-.
T Consensus 128 ~q~~paHk~vla--~gS~VFdaMf~g~~a~--~~s~ei~lpdvepaaFl~~L~flYsdev~~-~~dtvi~tl~~AkKY~V 202 (521)
T KOG2075|consen 128 SQRIPAHKLVLA--DGSDVFDAMFYGGLAE--DASLEIRLPDVEPAAFLAFLRFLYSDEVKL-AADTVITTLYAAKKYLV 202 (521)
T ss_pred ccccchhhhhhh--cchHHHHHHhccCccc--ccCceeecCCcChhHhHHHHHHHhcchhhh-hHHHHHHHHHHHHHhhh
Confidence 456667766666 3468999999986532 24566655 899999999999999965533 33344556666777777
Q ss_pred hhHHHHHHHhhhhc
Q 022265 96 LGLIERIHAVINKR 109 (300)
Q Consensus 96 ~~l~~~~~~~i~~~ 109 (300)
+.|.+.|-+.+++.
T Consensus 203 paLer~CVkflr~~ 216 (521)
T KOG2075|consen 203 PALERQCVKFLRKN 216 (521)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777666555443
No 37
>PTZ00395 Sec24-related protein; Provisional
Probab=51.20 E-value=28 Score=37.04 Aligned_cols=8 Identities=25% Similarity=0.551 Sum_probs=5.2
Q ss_pred cEEEcCCC
Q 022265 53 YIFVDRDG 60 (300)
Q Consensus 53 ~~fiDrdp 60 (300)
.++||--|
T Consensus 220 ~~~~~~~~ 227 (1560)
T PTZ00395 220 DIYIDSQP 227 (1560)
T ss_pred ceEeecCC
Confidence 46777655
No 38
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=46.96 E-value=23 Score=30.48 Aligned_cols=27 Identities=26% Similarity=0.267 Sum_probs=11.0
Q ss_pred cccCCCCCCCcCCccccccccccceec
Q 022265 139 NLSGLDLSKLDLSLVDFSYACLRNVFF 165 (300)
Q Consensus 139 ~l~~~~l~~~~l~~~~f~~~~l~~~~f 165 (300)
.|.++++.++.=.....++..++++..
T Consensus 101 ~L~nv~~~~A~Et~W~c~~i~l~nv~~ 127 (277)
T PF12541_consen 101 TLENVDIPDADETLWNCRGIKLKNVQA 127 (277)
T ss_pred EEEeeEeCCCcccCEEeCCeEEEeEEE
Confidence 333333333333334444444444444
No 39
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=46.35 E-value=70 Score=23.07 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=40.6
Q ss_pred eeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEc-CCCCcHHHHHHHHhcCCC
Q 022265 14 NIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVD-RDGKHFRHILNWLRDGAV 75 (300)
Q Consensus 14 nVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiD-rdp~~F~~Il~~lr~g~~ 75 (300)
--.|..|.+++..... ..++..|++..... .....++-+. .++..++.|++|+....-
T Consensus 8 S~Dg~~f~v~~~~a~~---S~~i~~~l~~~~~~-~~~~~~Ipl~~v~~~~L~~Vi~yc~~h~~ 66 (104)
T smart00512 8 SSDGEVFEVEREVARQ---SKTIKAMIEDLGVD-DENNNPIPLPNVTSKILSKVIEYCEHHVD 66 (104)
T ss_pred eCCCCEEEecHHHHHH---HHHHHHHHHccCcc-cCCCCCccCCCcCHHHHHHHHHHHHHccc
Confidence 3468999999998864 35778888753211 1111466664 889999999999997543
No 40
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=45.67 E-value=34 Score=22.17 Aligned_cols=51 Identities=10% Similarity=0.300 Sum_probs=35.2
Q ss_pred eCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEE-cCCCCcHHHHHHHHhc
Q 022265 15 IGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFV-DRDGKHFRHILNWLRD 72 (300)
Q Consensus 15 VgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fi-Drdp~~F~~Il~~lr~ 72 (300)
=.|..|.++++.... ...+..|+.+.... ..++-+ .-++..++.|++|..+
T Consensus 8 sDg~~f~V~~~~a~~---S~~i~~ml~~~~~~----~~~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 8 SDGQEFEVSREAAKQ---SKTIKNMLEDLGDE----DEPIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp TTSEEEEEEHHHHTT---SHHHHHHHHCTCCC----GTEEEETTS-HHHHHHHHHHHHH
T ss_pred CCCCEEEeeHHHHHH---hHHHHHHHhhhccc----ccccccCccCHHHHHHHHHHHHh
Confidence 369999999999974 46888888752211 113444 5778888999998764
No 41
>PRK09716 hypothetical protein; Provisional
Probab=44.45 E-value=9.3 Score=32.02 Aligned_cols=69 Identities=28% Similarity=0.375 Sum_probs=34.6
Q ss_pred cchhHHHHHHHhhccCceecc-----ccccCCCCCCCcCCccccccccccceeccccccccccccccccCCccc
Q 022265 117 TELTRIDIIKCIQSEKVRFRG-----LNLSGLDLSKLDLSLVDFSYACLRNVFFSRANLQSAKFRDVDAEGSIF 185 (300)
Q Consensus 117 ~~l~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~~l~~~~f~~~~l~~~~f~~~~l~~~~f~~~~~~~~~f 185 (300)
..+.-+++.+.+..-++.|+. ++|+.+|+.+.+|..-+|..-.+.++.+.--.|...+|.++++-.++|
T Consensus 125 vn~plkdiyneirrlnvifscgtg~ivdlssldlrni~l~~ydftdkhman~ilnpfkl~~t~ftnanmfqvnf 198 (395)
T PRK09716 125 VNCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNF 198 (395)
T ss_pred ecCcHHHHHHHHhhheEEEEcCCCCeeecccccccccceeecccchHhHHhhccCceecCCCCCcccceEEEEE
Confidence 344555666554333344442 344455555555555555555555555555455555555544444444
No 42
>PRK09716 hypothetical protein; Provisional
Probab=29.96 E-value=46 Score=28.02 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=11.1
Q ss_pred CCcEEEcCCCCcHHHHHHHHhcC
Q 022265 51 EGYIFVDRDGKHFRHILNWLRDG 73 (300)
Q Consensus 51 ~~~~fiDrdp~~F~~Il~~lr~g 73 (300)
.|...|-.| |+.=|.||+.-
T Consensus 59 ggkciitgd---fqkelaylqnv 78 (395)
T PRK09716 59 GGKCIITGD---FQKELAYLQNV 78 (395)
T ss_pred CCeEEEeCc---HHHHHHHHhhe
Confidence 345555433 66666666653
No 43
>PRK10984 DNA-binding transcriptional regulator Crl; Provisional
Probab=25.44 E-value=58 Score=24.69 Aligned_cols=33 Identities=30% Similarity=0.286 Sum_probs=21.8
Q ss_pred hhhcCCCCchHHHHhcCCCCc---ccCCCCcEEEcC
Q 022265 26 TLTRREPESMLAAMFSGRHTV---FQDSEGYIFVDR 58 (300)
Q Consensus 26 tl~~~~p~s~l~~~~~~~~~~---~~~~~~~~fiDr 58 (300)
|+.+.+|.++|-+-|..-.|. .+.+++.||||+
T Consensus 2 ~l~~~~~~~RLlk~f~alGPYlRE~qc~e~~ffFDC 37 (127)
T PRK10984 2 TLPSGHPKSRLIKKFTALGPYLREGQCEENRFFFDC 37 (127)
T ss_pred CCCCCCCchHHHHHHHHhCchhchhcccCCCEEeee
Confidence 445556777777777643333 256789999998
No 44
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=22.88 E-value=88 Score=27.85 Aligned_cols=82 Identities=23% Similarity=0.295 Sum_probs=52.7
Q ss_pred EEEEEehhhhhcCCCCchHHHHhcCCC-CcccCCCCcEEEcCCCCcHHHHHHHHhcCCCCCCChHHHHHHHHHHhhhchh
Q 022265 18 KKFYTTIDTLTRREPESMLAAMFSGRH-TVFQDSEGYIFVDRDGKHFRHILNWLRDGAVPTLTESKFLELLREAEYYQLL 96 (300)
Q Consensus 18 ~~f~~~~~tl~~~~p~s~l~~~~~~~~-~~~~~~~~~~fiDrdp~~F~~Il~~lr~g~~~~~~~~~~~~l~~Ea~f~~l~ 96 (300)
+-|.-.+..|.+ .-.+|+.+.+... ....-+.=.+-+-+|-.+|..+++|... +-|.+.......++--++|.++.
T Consensus 14 rdF~C~~~lL~~--~M~YF~~~l~~~~~~~~~~~~idisVhCDv~iF~WLm~yv~~-~~p~l~~~NvvsIliSS~FL~M~ 90 (317)
T PF11822_consen 14 RDFTCPRDLLVS--EMRYFAEYLSRYINDSQRWEEIDISVHCDVHIFEWLMRYVKG-EPPSLTPSNVVSILISSEFLQME 90 (317)
T ss_pred eeeeccHHHHHH--hhHHHHHHHhhcccccCcCCCcceEEecChhHHHHHHHHhhc-CCCcCCcCcEEEeEehhhhhccH
Confidence 568888999985 3568888875411 1112223457788999999999999998 33333333344455566666666
Q ss_pred hHHHHH
Q 022265 97 GLIERI 102 (300)
Q Consensus 97 ~l~~~~ 102 (300)
.|.+.+
T Consensus 91 ~Lve~c 96 (317)
T PF11822_consen 91 SLVEEC 96 (317)
T ss_pred HHHHHH
Confidence 666644
No 45
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.72 E-value=3.2e+02 Score=25.40 Aligned_cols=97 Identities=25% Similarity=0.225 Sum_probs=64.9
Q ss_pred CCCcEEEeeCCEEEEEehhhhhcCCCCchHHHHhcCCCCcccCCCCcEEEc-CCC----CcHHHHHHHHhcCCCCCCChH
Q 022265 7 SSSMVRLNIGGKKFYTTIDTLTRREPESMLAAMFSGRHTVFQDSEGYIFVD-RDG----KHFRHILNWLRDGAVPTLTES 81 (300)
Q Consensus 7 ~~~~v~lnVgG~~f~~~~~tl~~~~p~s~l~~~~~~~~~~~~~~~~~~fiD-rdp----~~F~~Il~~lr~g~~~~~~~~ 81 (300)
.+.-|.|-.=|......+--|.+ .| +|..||+|.+.. ...+.+-+. -|| ..|...+.=|....+.+ +..
T Consensus 68 enSDv~l~alg~eWrlHk~yL~Q-S~--yf~smf~Gtw~e--s~~~iIqleI~Dp~Id~~al~~a~gsLY~dEveI-~l~ 141 (488)
T KOG4682|consen 68 ENSDVILEALGFEWRLHKPYLFQ-SE--YFKSMFSGTWKE--SSMNIIQLEIPDPNIDVVALQVAFGSLYRDEVEI-KLS 141 (488)
T ss_pred CCcceehhhccceeeeeeeeeec-cH--HHHHHhccccCh--hhCceEEEEcCCCcccHHHHHHHHhhhhhhheec-cHH
Confidence 44556777788888888888875 34 999999986532 222333221 333 34666666666656644 455
Q ss_pred HHHHHHHHHhhhchhhHHHHHHHhhhhc
Q 022265 82 KFLELLREAEYYQLLGLIERIHAVINKR 109 (300)
Q Consensus 82 ~~~~l~~Ea~f~~l~~l~~~~~~~i~~~ 109 (300)
....++..|-++.+.++++.|.++..+.
T Consensus 142 dv~gvlAaA~~lqldgl~qrC~evMie~ 169 (488)
T KOG4682|consen 142 DVVGVLAAACLLQLDGLIQRCGEVMIET 169 (488)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 6777888888999999988888776444
Done!