Query 022266
Match_columns 300
No_of_seqs 212 out of 1243
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 09:18:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022266.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022266hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 9.3E-44 2E-48 326.0 9.1 178 88-285 83-261 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 2.9E-38 6.4E-43 272.3 14.6 161 94-275 1-162 (162)
3 TIGR02245 HAD_IIID1 HAD-superf 100.0 6.9E-38 1.5E-42 277.2 14.4 161 89-285 16-193 (195)
4 PF03031 NIF: NLI interacting 100.0 6.3E-37 1.4E-41 261.2 11.9 157 95-277 1-159 (159)
5 KOG2832 TFIIF-interacting CTD 100.0 4.4E-31 9.6E-36 247.8 12.3 158 87-281 182-341 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 1.8E-30 3.9E-35 222.8 12.3 144 91-251 3-155 (156)
7 smart00577 CPDc catalytic doma 99.9 1.4E-26 3E-31 196.4 12.3 146 93-256 1-147 (148)
8 COG5190 FCP1 TFIIF-interacting 99.9 1.9E-25 4.1E-30 214.5 8.5 183 79-283 197-381 (390)
9 KOG0323 TFIIF-interacting CTD 99.7 1E-16 2.3E-21 162.0 10.2 151 93-251 145-298 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.9 2.9E-09 6.3E-14 93.1 7.3 103 151-253 43-160 (174)
11 PLN02770 haloacid dehalogenase 98.8 2.8E-09 6.1E-14 97.4 3.6 101 152-252 107-210 (248)
12 PRK13288 pyrophosphatase PpaX; 98.8 5.1E-09 1.1E-13 92.9 3.8 96 152-247 81-179 (214)
13 TIGR01681 HAD-SF-IIIC HAD-supe 98.7 7E-09 1.5E-13 85.9 3.6 82 153-236 29-121 (128)
14 PLN03243 haloacid dehalogenase 98.7 1.1E-08 2.3E-13 94.7 4.5 98 152-249 108-208 (260)
15 PRK14988 GMP/IMP nucleotidase; 98.7 4.8E-09 1E-13 94.7 2.1 94 152-245 92-188 (224)
16 TIGR01454 AHBA_synth_RP 3-amin 98.7 5.2E-09 1.1E-13 92.3 1.9 96 152-247 74-172 (205)
17 PRK13226 phosphoglycolate phos 98.7 1.3E-08 2.9E-13 91.8 4.3 96 152-247 94-192 (229)
18 TIGR01509 HAD-SF-IA-v3 haloaci 98.7 1.3E-08 2.8E-13 87.0 3.8 92 152-244 84-178 (183)
19 TIGR01449 PGP_bact 2-phosphogl 98.7 1.6E-08 3.5E-13 89.1 3.7 98 152-249 84-184 (213)
20 TIGR01993 Pyr-5-nucltdase pyri 98.7 5.8E-09 1.3E-13 90.4 0.8 91 153-245 84-180 (184)
21 PRK11587 putative phosphatase; 98.6 1.3E-08 2.8E-13 90.9 2.8 98 152-250 82-182 (218)
22 PLN02575 haloacid dehalogenase 98.6 2.3E-08 5.1E-13 97.2 4.7 98 153-250 216-316 (381)
23 COG4996 Predicted phosphatase 98.6 1.6E-07 3.6E-12 78.0 8.6 150 96-270 2-161 (164)
24 TIGR01662 HAD-SF-IIIA HAD-supe 98.6 1.4E-07 3E-12 77.5 7.9 92 152-245 24-126 (132)
25 TIGR02009 PGMB-YQAB-SF beta-ph 98.6 2.2E-08 4.7E-13 86.2 3.2 92 152-245 87-181 (185)
26 PRK10725 fructose-1-P/6-phosph 98.6 2.5E-08 5.5E-13 86.2 3.2 92 154-246 89-182 (188)
27 PRK13225 phosphoglycolate phos 98.6 5.9E-08 1.3E-12 90.4 5.2 94 153-247 142-236 (273)
28 PRK13223 phosphoglycolate phos 98.6 4.8E-08 1E-12 90.7 4.2 94 152-245 100-196 (272)
29 cd01427 HAD_like Haloacid deha 98.6 1.1E-07 2.4E-12 75.8 5.5 87 152-238 23-128 (139)
30 PRK10826 2-deoxyglucose-6-phos 98.5 8.4E-08 1.8E-12 85.7 4.3 99 152-250 91-192 (222)
31 TIGR03351 PhnX-like phosphonat 98.5 4.9E-08 1.1E-12 86.7 2.6 95 152-246 86-186 (220)
32 TIGR01684 viral_ppase viral ph 98.5 4.2E-07 9E-12 85.3 8.3 126 91-258 123-283 (301)
33 COG0637 Predicted phosphatase/ 98.5 5.5E-08 1.2E-12 87.8 2.3 99 152-250 85-186 (221)
34 TIGR01656 Histidinol-ppas hist 98.5 2.3E-07 5E-12 78.2 5.7 91 153-245 27-140 (147)
35 TIGR02247 HAD-1A3-hyp Epoxide 98.5 1E-07 2.2E-12 84.3 3.5 99 152-250 93-196 (211)
36 TIGR00213 GmhB_yaeD D,D-heptos 98.5 5.5E-07 1.2E-11 78.0 7.9 93 152-246 25-146 (176)
37 PRK13222 phosphoglycolate phos 98.5 1.6E-07 3.4E-12 83.4 4.6 94 152-245 92-188 (226)
38 PHA03398 viral phosphatase sup 98.4 1.2E-06 2.5E-11 82.4 10.1 126 91-258 125-285 (303)
39 PLN02940 riboflavin kinase 98.4 1.3E-07 2.8E-12 92.1 3.0 97 152-248 92-192 (382)
40 PRK10563 6-phosphogluconate ph 98.4 1.6E-08 3.5E-13 90.0 -3.2 96 152-249 87-185 (221)
41 PRK08942 D,D-heptose 1,7-bisph 98.4 1.4E-06 3.1E-11 75.6 8.1 93 152-246 28-143 (181)
42 TIGR01686 FkbH FkbH-like domai 98.3 7.2E-07 1.6E-11 84.7 6.2 111 93-237 2-117 (320)
43 TIGR01261 hisB_Nterm histidino 98.3 1.3E-06 2.9E-11 75.2 7.2 98 152-251 28-148 (161)
44 TIGR00338 serB phosphoserine p 98.3 9.1E-07 2E-11 78.5 5.7 95 152-246 84-191 (219)
45 PHA02597 30.2 hypothetical pro 98.3 1.9E-07 4.1E-12 81.8 0.9 98 152-252 73-176 (197)
46 TIGR01549 HAD-SF-IA-v1 haloaci 98.3 6E-07 1.3E-11 75.2 3.7 81 153-236 64-147 (154)
47 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 1.6E-06 3.5E-11 75.4 6.2 95 152-246 79-186 (201)
48 PF12689 Acid_PPase: Acid Phos 98.2 2.5E-06 5.4E-11 74.3 6.7 83 151-237 43-138 (169)
49 PHA02530 pseT polynucleotide k 98.2 1.7E-06 3.7E-11 80.7 6.1 141 82-252 146-298 (300)
50 PRK06698 bifunctional 5'-methy 98.2 1.1E-06 2.4E-11 87.3 3.8 93 152-246 329-423 (459)
51 TIGR01672 AphA HAD superfamily 98.2 5.4E-06 1.2E-10 76.0 7.6 88 154-246 115-207 (237)
52 COG0546 Gph Predicted phosphat 98.2 1.1E-06 2.4E-11 78.8 3.0 96 152-247 88-186 (220)
53 TIGR01664 DNA-3'-Pase DNA 3'-p 98.2 7.1E-06 1.5E-10 71.0 7.7 78 154-233 43-137 (166)
54 PLN02919 haloacid dehalogenase 98.1 4.5E-06 9.8E-11 90.9 7.9 97 154-250 162-262 (1057)
55 PF13419 HAD_2: Haloacid dehal 98.0 4.3E-06 9.4E-11 69.8 3.8 94 151-244 75-171 (176)
56 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.5E-05 3.3E-10 68.4 7.0 90 152-241 71-180 (188)
57 TIGR01668 YqeG_hyp_ppase HAD s 98.0 9.3E-06 2E-10 70.3 5.0 111 91-249 22-135 (170)
58 PRK06769 hypothetical protein; 97.9 1.3E-05 2.8E-10 69.6 5.3 97 153-249 28-136 (173)
59 TIGR02253 CTE7 HAD superfamily 97.9 8.3E-06 1.8E-10 72.2 4.2 96 152-247 93-192 (221)
60 PF05152 DUF705: Protein of un 97.9 0.0001 2.2E-09 68.7 10.7 124 92-257 120-278 (297)
61 PRK09552 mtnX 2-hydroxy-3-keto 97.9 3.1E-05 6.7E-10 69.2 7.1 93 152-244 73-181 (219)
62 TIGR01428 HAD_type_II 2-haloal 97.9 1.4E-05 3.1E-10 69.8 4.4 95 152-246 91-188 (198)
63 PRK13582 thrH phosphoserine ph 97.9 1.7E-05 3.6E-10 69.6 4.5 95 152-246 67-167 (205)
64 TIGR02254 YjjG/YfnB HAD superf 97.8 1.7E-05 3.7E-10 70.0 4.6 96 152-247 96-195 (224)
65 PRK05446 imidazole glycerol-ph 97.8 5.8E-05 1.3E-09 73.0 7.9 122 93-247 1-145 (354)
66 PRK09449 dUMP phosphatase; Pro 97.7 3E-05 6.6E-10 69.0 4.4 94 152-245 94-191 (224)
67 PRK11009 aphA acid phosphatase 97.7 3.7E-05 7.9E-10 70.5 4.9 86 152-246 113-207 (237)
68 COG5190 FCP1 TFIIF-interacting 97.7 3.7E-05 8E-10 74.9 4.8 146 90-248 22-172 (390)
69 TIGR01663 PNK-3'Pase polynucle 97.7 0.00015 3.3E-09 73.5 9.3 112 92-235 166-296 (526)
70 TIGR01670 YrbI-phosphatas 3-de 97.7 3.3E-05 7.1E-10 65.8 3.2 85 152-245 29-114 (154)
71 KOG3109 Haloacid dehalogenase- 97.6 3.8E-05 8.3E-10 69.1 3.5 92 152-244 99-199 (244)
72 PRK09456 ?-D-glucose-1-phospha 97.6 3.8E-05 8.3E-10 67.5 3.4 99 152-250 83-185 (199)
73 TIGR02137 HSK-PSP phosphoserin 97.6 5.7E-05 1.2E-09 67.5 4.3 84 152-238 67-159 (203)
74 TIGR01422 phosphonatase phosph 97.6 6.5E-05 1.4E-09 68.4 4.5 98 152-249 98-200 (253)
75 PLN02954 phosphoserine phospha 97.6 0.00015 3.2E-09 64.5 6.2 92 152-245 83-191 (224)
76 COG1011 Predicted hydrolase (H 97.5 0.00018 3.9E-09 63.7 5.4 93 152-244 98-193 (229)
77 PRK11133 serB phosphoserine ph 97.4 0.00017 3.7E-09 68.9 4.7 96 152-247 180-288 (322)
78 TIGR01691 enolase-ppase 2,3-di 97.4 0.00013 2.9E-09 66.0 3.3 95 152-246 94-192 (220)
79 TIGR02252 DREG-2 REG-2-like, H 97.3 0.00021 4.6E-09 62.5 4.3 91 153-244 105-199 (203)
80 TIGR01990 bPGM beta-phosphoglu 97.3 0.00015 3.3E-09 62.1 3.2 92 153-246 87-181 (185)
81 PRK13478 phosphonoacetaldehyde 97.3 0.00037 7.9E-09 64.2 5.4 98 152-249 100-202 (267)
82 PF08645 PNK3P: Polynucleotide 97.3 0.0012 2.6E-08 56.7 8.1 81 152-235 28-130 (159)
83 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.00063 1.4E-08 59.6 6.2 81 154-235 107-190 (197)
84 PRK08238 hypothetical protein; 97.2 0.00097 2.1E-08 67.1 7.7 49 153-204 72-121 (479)
85 PLN02779 haloacid dehalogenase 97.2 0.00036 7.8E-09 65.4 4.2 98 152-250 143-246 (286)
86 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.2 0.00088 1.9E-08 60.9 6.3 78 154-234 25-106 (242)
87 PLN02811 hydrolase 97.0 0.00053 1.1E-08 61.3 3.7 97 153-249 78-183 (220)
88 TIGR01533 lipo_e_P4 5'-nucleot 97.0 0.0022 4.7E-08 59.9 7.4 79 153-236 118-201 (266)
89 PRK09484 3-deoxy-D-manno-octul 96.9 0.00053 1.1E-08 60.0 2.2 78 162-246 57-135 (183)
90 TIGR01493 HAD-SF-IA-v2 Haloaci 96.8 0.00033 7.1E-09 59.8 0.3 78 152-235 89-168 (175)
91 COG0560 SerB Phosphoserine pho 96.8 0.003 6.5E-08 56.9 6.3 87 152-238 76-175 (212)
92 PTZ00445 p36-lilke protein; Pr 96.6 0.002 4.4E-08 58.0 4.0 133 89-250 38-205 (219)
93 PF13344 Hydrolase_6: Haloacid 96.6 0.006 1.3E-07 48.5 5.9 37 154-190 15-52 (101)
94 TIGR01689 EcbF-BcbF capsule bi 96.5 0.0085 1.8E-07 49.8 6.9 49 154-202 25-87 (126)
95 COG2179 Predicted hydrolase of 96.5 0.0045 9.7E-08 53.8 5.3 114 89-250 23-141 (175)
96 COG0241 HisB Histidinol phosph 96.5 0.0071 1.5E-07 53.3 6.5 85 153-237 31-136 (181)
97 PRK11590 hypothetical protein; 96.4 0.0069 1.5E-07 53.9 6.2 39 152-190 94-134 (211)
98 KOG2914 Predicted haloacid-hal 96.3 0.00047 1E-08 62.6 -2.0 98 152-249 91-195 (222)
99 PRK10748 flavin mononucleotide 96.3 0.0027 5.9E-08 57.5 2.9 89 153-246 113-204 (238)
100 PRK00192 mannosyl-3-phosphogly 96.2 0.012 2.7E-07 54.2 6.5 39 155-193 23-62 (273)
101 TIGR01544 HAD-SF-IE haloacid d 96.1 0.013 2.8E-07 55.0 6.2 86 152-237 120-225 (277)
102 COG3882 FkbH Predicted enzyme 96.1 0.011 2.4E-07 59.0 5.8 132 92-250 220-355 (574)
103 PF09419 PGP_phosphatase: Mito 95.9 0.023 5.1E-07 49.5 6.8 97 89-234 36-147 (168)
104 COG0561 Cof Predicted hydrolas 95.8 0.023 5E-07 51.9 6.7 59 93-193 2-61 (264)
105 TIGR01487 SPP-like sucrose-pho 95.6 0.031 6.8E-07 49.5 6.4 39 155-193 20-59 (215)
106 PRK10513 sugar phosphate phosp 95.5 0.051 1.1E-06 49.6 7.4 36 157-192 24-60 (270)
107 TIGR02726 phenyl_P_delta pheny 95.4 0.014 2.9E-07 50.9 3.3 118 93-249 6-124 (169)
108 PF08282 Hydrolase_3: haloacid 95.4 0.036 7.7E-07 48.8 6.1 37 156-192 18-55 (254)
109 TIGR03333 salvage_mtnX 2-hydro 95.4 0.039 8.4E-07 49.1 6.2 93 152-244 69-177 (214)
110 PRK01158 phosphoglycolate phos 95.3 0.048 1E-06 48.4 6.6 39 155-193 22-61 (230)
111 PF06888 Put_Phosphatase: Puta 95.3 0.064 1.4E-06 49.2 7.3 53 152-204 70-125 (234)
112 TIGR02461 osmo_MPG_phos mannos 95.2 0.046 9.9E-07 49.4 6.2 37 156-192 18-55 (225)
113 PRK10444 UMP phosphatase; Prov 95.2 0.044 9.6E-07 50.4 6.1 36 155-190 19-55 (248)
114 PRK10530 pyridoxal phosphate ( 95.1 0.061 1.3E-06 48.9 6.8 15 94-108 3-17 (272)
115 TIGR02463 MPGP_rel mannosyl-3- 95.0 0.054 1.2E-06 48.0 6.1 35 158-192 21-56 (221)
116 TIGR00099 Cof-subfamily Cof su 95.0 0.054 1.2E-06 49.2 6.1 37 156-192 19-56 (256)
117 TIGR01488 HAD-SF-IB Haloacid D 95.0 0.041 8.8E-07 46.6 4.9 49 152-200 72-121 (177)
118 PRK15126 thiamin pyrimidine py 95.0 0.062 1.3E-06 49.3 6.4 15 94-108 2-16 (272)
119 PRK03669 mannosyl-3-phosphogly 94.9 0.062 1.3E-06 49.6 6.3 59 92-192 5-64 (271)
120 smart00775 LNS2 LNS2 domain. T 94.9 0.061 1.3E-06 46.0 5.7 36 154-189 28-67 (157)
121 PRK10976 putative hydrolase; P 94.8 0.073 1.6E-06 48.6 6.4 15 94-108 2-16 (266)
122 PLN02645 phosphoglycolate phos 94.5 0.075 1.6E-06 50.3 6.0 35 156-190 47-82 (311)
123 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.2 0.087 1.9E-06 48.5 5.5 35 155-189 23-58 (257)
124 TIGR01452 PGP_euk phosphoglyco 94.2 0.11 2.3E-06 48.3 6.0 35 155-189 20-55 (279)
125 KOG3120 Predicted haloacid deh 94.1 0.023 5E-07 51.6 1.4 52 154-205 85-138 (256)
126 TIGR01486 HAD-SF-IIB-MPGP mann 94.0 0.12 2.6E-06 47.1 6.0 36 157-192 20-56 (256)
127 PRK12702 mannosyl-3-phosphogly 94.0 0.14 3.1E-06 48.5 6.6 36 158-193 23-59 (302)
128 TIGR01484 HAD-SF-IIB HAD-super 94.0 0.11 2.4E-06 45.4 5.4 37 154-190 18-55 (204)
129 TIGR01456 CECR5 HAD-superfamil 93.8 0.099 2.1E-06 49.8 5.2 35 155-189 18-61 (321)
130 TIGR01482 SPP-subfamily Sucros 93.8 0.13 2.8E-06 45.4 5.7 33 158-190 20-53 (225)
131 PF11019 DUF2608: Protein of u 93.8 0.06 1.3E-06 49.8 3.6 98 152-251 80-210 (252)
132 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.6 0.16 3.5E-06 46.5 6.1 23 156-178 20-43 (249)
133 TIGR01490 HAD-SF-IB-hyp1 HAD-s 93.4 0.075 1.6E-06 46.2 3.4 86 153-238 87-186 (202)
134 PTZ00174 phosphomannomutase; P 93.3 0.2 4.4E-06 45.6 6.1 16 93-108 4-19 (247)
135 PRK14502 bifunctional mannosyl 93.2 0.31 6.6E-06 51.2 7.9 67 84-192 406-473 (694)
136 COG0647 NagD Predicted sugar p 92.8 0.21 4.5E-06 46.8 5.5 36 155-190 26-62 (269)
137 TIGR01460 HAD-SF-IIA Haloacid 92.3 0.25 5.4E-06 44.8 5.2 32 156-187 17-53 (236)
138 COG4359 Uncharacterized conser 92.1 0.42 9.2E-06 42.5 6.2 43 152-194 72-115 (220)
139 TIGR01675 plant-AP plant acid 91.9 0.35 7.6E-06 44.2 5.6 49 154-202 121-172 (229)
140 PLN02423 phosphomannomutase 91.8 0.36 7.7E-06 44.2 5.7 16 93-108 6-21 (245)
141 PLN02887 hydrolase family prot 91.3 0.42 9E-06 49.4 6.2 59 91-191 305-364 (580)
142 COG2503 Predicted secreted aci 90.9 0.42 9.1E-06 44.1 5.1 38 153-190 122-161 (274)
143 TIGR01485 SPP_plant-cyano sucr 90.5 0.39 8.4E-06 43.6 4.6 37 155-191 23-60 (249)
144 TIGR01511 ATPase-IB1_Cu copper 89.7 0.53 1.2E-05 48.3 5.3 84 153-246 405-489 (562)
145 PRK10187 trehalose-6-phosphate 89.7 0.67 1.4E-05 42.9 5.5 35 155-189 38-74 (266)
146 TIGR01548 HAD-SF-IA-hyp1 haloa 89.3 0.17 3.7E-06 44.1 1.2 14 96-109 2-15 (197)
147 COG4502 5'(3')-deoxyribonucleo 88.9 0.97 2.1E-05 38.6 5.3 82 153-250 68-154 (180)
148 PF03767 Acid_phosphat_B: HAD 88.4 0.53 1.2E-05 42.8 3.8 39 154-192 116-155 (229)
149 PF00702 Hydrolase: haloacid d 88.3 0.61 1.3E-05 40.3 4.0 76 154-234 128-206 (215)
150 TIGR02253 CTE7 HAD superfamily 87.6 0.32 7E-06 42.7 1.9 16 95-110 3-18 (221)
151 TIGR02244 HAD-IG-Ncltidse HAD 86.8 0.96 2.1E-05 43.8 4.7 53 150-202 181-242 (343)
152 PLN02151 trehalose-phosphatase 86.6 1.1 2.3E-05 43.7 4.9 60 91-187 95-154 (354)
153 TIGR02252 DREG-2 REG-2-like, H 86.5 0.35 7.7E-06 42.0 1.5 15 95-109 1-15 (203)
154 TIGR01422 phosphonatase phosph 86.5 0.4 8.7E-06 43.4 1.8 15 95-109 3-17 (253)
155 PRK13478 phosphonoacetaldehyde 86.3 0.37 8E-06 44.2 1.5 16 94-109 4-19 (267)
156 PRK10748 flavin mononucleotide 85.9 0.38 8.3E-06 43.4 1.4 16 94-109 10-25 (238)
157 PLN03017 trehalose-phosphatase 85.4 1.3 2.9E-05 43.2 4.9 34 154-187 134-167 (366)
158 TIGR01680 Veg_Stor_Prot vegeta 85.2 2.1 4.6E-05 40.2 6.0 86 154-239 146-238 (275)
159 KOG3085 Predicted hydrolase (H 85.1 0.47 1E-05 43.6 1.6 88 154-243 115-206 (237)
160 PF06941 NT5C: 5' nucleotidase 84.8 1.5 3.1E-05 38.3 4.5 82 152-249 72-161 (191)
161 TIGR01990 bPGM beta-phosphoglu 84.5 0.42 9.2E-06 40.6 0.9 15 96-110 1-15 (185)
162 PLN02779 haloacid dehalogenase 84.0 0.58 1.3E-05 43.8 1.7 17 93-109 39-55 (286)
163 TIGR01493 HAD-SF-IA-v2 Haloaci 83.4 0.55 1.2E-05 39.7 1.2 13 97-109 2-14 (175)
164 TIGR02254 YjjG/YfnB HAD superf 83.4 0.58 1.2E-05 41.0 1.4 15 95-109 2-16 (224)
165 TIGR01428 HAD_type_II 2-haloal 83.4 0.59 1.3E-05 40.5 1.4 15 95-109 2-16 (198)
166 TIGR00685 T6PP trehalose-phosp 82.5 1.5 3.2E-05 39.9 3.7 15 93-107 2-16 (244)
167 PRK09449 dUMP phosphatase; Pro 82.4 0.64 1.4E-05 41.0 1.3 15 94-108 3-17 (224)
168 COG1877 OtsB Trehalose-6-phosp 81.9 2.9 6.3E-05 39.1 5.4 61 90-187 14-76 (266)
169 COG4229 Predicted enolase-phos 80.6 1.6 3.5E-05 38.8 3.1 93 152-245 102-199 (229)
170 PF08235 LNS2: LNS2 (Lipin/Ned 80.5 3.3 7.1E-05 35.8 4.9 37 153-189 27-64 (157)
171 COG3769 Predicted hydrolase (H 80.4 4.7 0.0001 37.0 6.0 34 160-193 30-64 (274)
172 PLN02580 trehalose-phosphatase 79.4 3.7 8E-05 40.4 5.5 61 91-188 116-176 (384)
173 TIGR01512 ATPase-IB2_Cd heavy 79.4 1 2.2E-05 46.0 1.6 84 154-246 363-448 (536)
174 TIGR01525 ATPase-IB_hvy heavy 78.4 1.5 3.2E-05 44.9 2.5 84 154-246 385-470 (556)
175 PF13419 HAD_2: Haloacid dehal 78.3 1 2.2E-05 37.0 1.1 13 97-109 1-13 (176)
176 PRK14501 putative bifunctional 78.3 3 6.6E-05 44.1 4.8 35 155-189 516-552 (726)
177 PF05116 S6PP: Sucrose-6F-phos 73.6 4.4 9.5E-05 37.0 4.0 14 93-106 1-14 (247)
178 TIGR01545 YfhB_g-proteo haloac 73.2 7.8 0.00017 34.5 5.5 37 153-189 94-132 (210)
179 PF12710 HAD: haloacid dehalog 71.2 6.8 0.00015 33.1 4.5 45 155-199 87-138 (192)
180 TIGR01545 YfhB_g-proteo haloac 69.1 2.7 5.9E-05 37.5 1.6 16 93-108 4-19 (210)
181 TIGR02471 sucr_syn_bact_C sucr 68.0 5 0.00011 35.8 3.1 13 96-108 1-13 (236)
182 PRK09456 ?-D-glucose-1-phospha 67.6 3.1 6.8E-05 36.2 1.6 13 96-108 2-14 (199)
183 COG1011 Predicted hydrolase (H 65.9 3.7 8E-05 35.9 1.8 16 93-108 3-18 (229)
184 PF05822 UMPH-1: Pyrimidine 5' 65.5 7.1 0.00015 36.1 3.6 88 151-238 88-194 (246)
185 PLN02177 glycerol-3-phosphate 64.0 6 0.00013 40.3 3.0 21 168-188 122-142 (497)
186 PLN02382 probable sucrose-phos 62.9 4.8 0.0001 39.8 2.1 17 92-108 7-23 (413)
187 PF12710 HAD: haloacid dehalog 62.4 4.4 9.6E-05 34.3 1.5 13 97-109 1-13 (192)
188 KOG3107 Predicted haloacid deh 61.8 14 0.0003 36.5 4.9 29 79-107 182-210 (468)
189 PLN02205 alpha,alpha-trehalose 61.7 14 0.00029 40.3 5.4 15 93-107 595-609 (854)
190 TIGR01488 HAD-SF-IB Haloacid D 61.4 3.6 7.8E-05 34.5 0.8 12 97-108 2-13 (177)
191 PLN03063 alpha,alpha-trehalose 57.3 18 0.00039 39.0 5.4 35 154-188 533-569 (797)
192 TIGR01490 HAD-SF-IB-hyp1 HAD-s 57.2 5.3 0.00012 34.4 1.2 12 97-108 2-13 (202)
193 KOG2134 Polynucleotide kinase 54.8 18 0.0004 35.7 4.4 19 91-109 72-90 (422)
194 PRK10671 copA copper exporting 53.7 13 0.00028 40.1 3.6 84 154-246 651-735 (834)
195 PF02358 Trehalose_PPase: Treh 53.5 17 0.00036 32.6 3.8 33 153-185 19-53 (235)
196 KOG4549 Magnesium-dependent ph 52.9 82 0.0018 26.5 7.4 78 154-235 45-134 (144)
197 TIGR01497 kdpB K+-transporting 51.8 11 0.00024 39.8 2.7 41 154-194 447-488 (675)
198 PRK01122 potassium-transportin 50.8 13 0.00029 39.3 3.0 41 154-194 446-487 (679)
199 PRK14010 potassium-transportin 47.6 15 0.00032 38.9 2.8 41 154-194 442-483 (673)
200 PF00702 Hydrolase: haloacid d 45.3 13 0.00028 31.8 1.7 14 95-108 2-15 (215)
201 PLN03064 alpha,alpha-trehalose 42.2 46 0.001 36.6 5.6 36 154-189 623-660 (934)
202 PLN02499 glycerol-3-phosphate 39.7 19 0.00042 36.6 2.1 23 169-191 109-132 (498)
203 TIGR01459 HAD-SF-IIA-hyp4 HAD- 38.8 3.2 7E-05 37.5 -3.3 89 155-244 140-235 (242)
204 cd06537 CIDE_N_B CIDE_N domain 38.7 57 0.0012 25.1 4.1 16 93-108 38-53 (81)
205 cd06539 CIDE_N_A CIDE_N domain 38.4 60 0.0013 24.8 4.1 16 93-108 39-54 (78)
206 PF06941 NT5C: 5' nucleotidase 35.6 23 0.00051 30.6 1.8 16 94-109 2-17 (191)
207 TIGR01458 HAD-SF-IIA-hyp3 HAD- 35.6 3.1 6.7E-05 38.2 -4.0 36 211-246 184-220 (257)
208 PF10281 Ish1: Putative stress 35.3 18 0.00039 23.3 0.7 15 285-299 8-22 (38)
209 smart00266 CAD Domains present 33.3 75 0.0016 24.0 3.9 16 93-108 37-52 (74)
210 cd01615 CIDE_N CIDE_N domain, 32.0 82 0.0018 24.0 4.0 17 92-108 38-54 (78)
211 cd06538 CIDE_N_FSP27 CIDE_N do 31.8 72 0.0016 24.4 3.6 15 94-108 39-53 (79)
212 cd06536 CIDE_N_ICAD CIDE_N dom 31.3 83 0.0018 24.1 3.9 16 93-108 41-56 (80)
213 TIGR01658 EYA-cons_domain eyes 30.3 24 0.00052 32.9 1.0 12 95-106 3-14 (274)
214 PF04312 DUF460: Protein of un 27.5 2.3E+02 0.0049 24.0 6.3 13 97-109 46-58 (138)
215 cd02514 GT13_GLCNAC-TI GT13_GL 27.3 54 0.0012 31.7 2.8 40 150-189 6-52 (334)
216 PLN02588 glycerol-3-phosphate 26.3 99 0.0022 31.8 4.6 17 93-109 49-65 (525)
217 KOG1615 Phosphoserine phosphat 26.1 1.2E+02 0.0026 27.5 4.6 95 153-249 88-198 (227)
218 PF08484 Methyltransf_14: C-me 25.7 1.5E+02 0.0033 25.4 5.1 37 154-192 53-90 (160)
219 PRK11033 zntA zinc/cadmium/mer 25.4 89 0.0019 33.4 4.3 73 153-236 568-641 (741)
220 PF05761 5_nucleotid: 5' nucle 25.0 1E+02 0.0023 31.0 4.5 52 149-200 179-240 (448)
221 COG5404 SulA SOS-response cell 23.3 61 0.0013 27.7 2.1 48 246-297 34-86 (169)
222 KOG3189 Phosphomannomutase [Li 22.5 1.2E+02 0.0027 27.5 4.0 17 92-108 9-25 (252)
223 KOG3040 Predicted sugar phosph 21.2 1.3E+02 0.0028 27.7 3.8 85 154-240 24-126 (262)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=9.3e-44 Score=326.01 Aligned_cols=178 Identities=45% Similarity=0.664 Sum_probs=153.4
Q ss_pred ccccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhh
Q 022266 88 SEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE 167 (300)
Q Consensus 88 ~~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~ 167 (300)
.....+|++||||||||||||... +++... ..|. .++..+| ....+||++|||++|||+.+++
T Consensus 83 ~~~~~~kk~lVLDLDeTLvHss~~--~~~~~~--------~d~~-----~~v~~~~--~~~~~yV~kRP~vdeFL~~~s~ 145 (262)
T KOG1605|consen 83 RLATVGRKTLVLDLDETLVHSSLN--LKPIVN--------ADFT-----VPVEIDG--HIHQVYVRKRPHVDEFLSRVSK 145 (262)
T ss_pred ccccCCCceEEEeCCCcccccccc--cCCCCC--------ccee-----eeeeeCC--cceEEEEEcCCCHHHHHHHhHH
Confidence 344779999999999999997521 111110 0122 2233343 2457999999999999999999
Q ss_pred cceEEEEcCCchhhHHHHHHHhcC-CCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 168 FADLILFTAGLEGYARPLVDRIDG-ENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 168 ~yevvI~Ta~~~~YA~~vl~~LDp-~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
+||+++|||+.++||.+|++.||+ .+.|++|+||++|... ++.|+|||..+|+|+++||||||+|.+|.+||+|||+|
T Consensus 146 ~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~-~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI 224 (262)
T KOG1605|consen 146 WYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK-DGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPI 224 (262)
T ss_pred HHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE-CCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcc
Confidence 999999999999999999999999 6789999999999886 48999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcccCCCchHHHhhcCC
Q 022266 247 IPFSAGQPHDNQLLNVLLPLLKHLSLQKDVRPELYERFH 285 (300)
Q Consensus 247 ~~f~~g~~~D~~Ll~~l~~~L~~L~~~~DVR~~L~~~f~ 285 (300)
++|. +++.|.|||+ |+|||++|+..+|||.++++.|+
T Consensus 225 ~sw~-~d~~D~eLL~-LlpfLe~L~~~~Dvr~~l~~~~~ 261 (262)
T KOG1605|consen 225 KSWF-DDPTDTELLK-LLPFLEALAFVDDVRPILARRFG 261 (262)
T ss_pred cccc-cCCChHHHHH-HHHHHHHhcccccHHHHHHHhhc
Confidence 9998 7889999999 99999999999999999999876
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=2.9e-38 Score=272.28 Aligned_cols=161 Identities=45% Similarity=0.702 Sum_probs=136.6
Q ss_pred ceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcceEEE
Q 022266 94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173 (300)
Q Consensus 94 k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yevvI 173 (300)
|++|||||||||||+.+.... . .+ .|.+. ....| ....+||++|||++|||++|++.|+|+|
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~----~----~~---~~~~~-----~~~~~--~~~~~~v~~RPgl~eFL~~l~~~yei~I 62 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPK----V----DA---DFKVP-----VLIDG--KIIPVYVFKRPHVDEFLERVSKWYELVI 62 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCC----C----CC---ceEEE-----EEecC--cEEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence 689999999999998543210 0 00 11111 11112 1347899999999999999999999999
Q ss_pred EcCCchhhHHHHHHHhcCCC-ceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccccCCCCC
Q 022266 174 FTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG 252 (300)
Q Consensus 174 ~Ta~~~~YA~~vl~~LDp~~-~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~~g 252 (300)
||++++.||+++++.|||.+ +|.++++|++|...+ +.+.|+|+.+|++++++|+|||++..|..+|+|||+|.+|. |
T Consensus 63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~-~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~-~ 140 (162)
T TIGR02251 63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTN-GKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-G 140 (162)
T ss_pred EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeC-CCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC-C
Confidence 99999999999999999987 899999999998764 45999999999999999999999999999999999999997 8
Q ss_pred CCCcHHHHHHHHHHHHhcccCCC
Q 022266 253 QPHDNQLLNVLLPLLKHLSLQKD 275 (300)
Q Consensus 253 ~~~D~~Ll~~l~~~L~~L~~~~D 275 (300)
+.+|++|++ |++||+.|+.++|
T Consensus 141 ~~~D~~L~~-l~~~L~~l~~~~~ 162 (162)
T TIGR02251 141 DPNDTELLN-LIPFLEGLRFEDD 162 (162)
T ss_pred CCCHHHHHH-HHHHHHHHhccCC
Confidence 999999998 9999999998876
No 3
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=6.9e-38 Score=277.21 Aligned_cols=161 Identities=24% Similarity=0.297 Sum_probs=132.3
Q ss_pred cccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc
Q 022266 89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF 168 (300)
Q Consensus 89 ~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ 168 (300)
+...+|+||||||||||||+.... ...++.+|||+++||++++++
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~~-----------------------------------~~~~~~kRP~l~eFL~~~~~~ 60 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGEELMRPYLHEFLTSAYED 60 (195)
T ss_pred CCCCCCcEEEEeCCCceEcccccC-----------------------------------CCceEEeCCCHHHHHHHHHhC
Confidence 345689999999999999863210 024578999999999999999
Q ss_pred ceEEEEcCCchhhHHHHHHHhcCCC--ceeEEEecCCccc-----cCCC-cccccccCCCC------CCCcEEEEEcCcc
Q 022266 169 ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTS-----TEYR-EHVKDLSCLSK------DLCRTLIVDNNPF 234 (300)
Q Consensus 169 yevvI~Ta~~~~YA~~vl~~LDp~~--~f~~~l~r~~c~~-----~~~~-~~~KdL~~L~r------dl~~~ViVDDs~~ 234 (300)
|||+||||+++.||+.+++.+++.. .+...++.++|.. ...+ .++|||+.+|+ +++|||||||+|.
T Consensus 61 feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~ 140 (195)
T TIGR02245 61 YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRR 140 (195)
T ss_pred CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHH
Confidence 9999999999999999999997632 3444555577731 1223 45999998843 8899999999999
Q ss_pred ccccCCCCCccccCCCC---CCCCcHHHHHHHHHHHHhcccCCCchHHHhhcCC
Q 022266 235 SFLLQPLNGIPCIPFSA---GQPHDNQLLNVLLPLLKHLSLQKDVRPELYERFH 285 (300)
Q Consensus 235 ~~~~~p~NgI~I~~f~~---g~~~D~~Ll~~l~~~L~~L~~~~DVR~~L~~~f~ 285 (300)
++..||+|||+|++|.. ++++|++|++ |++||+.|+.++|||.++++.++
T Consensus 141 ~~~~~P~N~i~I~~f~~~~~~~~~D~eL~~-L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 141 NFLMNPQNGLKIRPFKKAHANRGTDQELLK-LTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred HHhcCCCCccccCCccccCCCCcccHHHHH-HHHHHHHHhcCcccchhhhcccc
Confidence 99999999999999984 3578999998 99999999999999999987653
No 4
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=6.3e-37 Score=261.19 Aligned_cols=157 Identities=45% Similarity=0.678 Sum_probs=120.5
Q ss_pred eEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcceEEEE
Q 022266 95 LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILF 174 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yevvI~ 174 (300)
|+|||||||||||+...+..+... .. . . ....+++++|||+++||++|+++|+|+||
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~-----------~~-------~----~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~ 57 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDF-----------KI-------I----D-QRGGYYVKLRPGLDEFLEELSKHYEVVIW 57 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SE-----------EE-------E----T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred CEEEEeCCCcEEEEeecCCCCccc-----------ce-------e----c-cccceeEeeCchHHHHHHHHHHhceEEEE
Confidence 689999999999986543221100 00 0 0 12467899999999999999999999999
Q ss_pred cCCchhhHHHHHHHhcCC-CceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccccCCCCCC
Q 022266 175 TAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ 253 (300)
Q Consensus 175 Ta~~~~YA~~vl~~LDp~-~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~~g~ 253 (300)
|++++.||++|++.|||+ .+|.++++|++|...+. .+.|||+++|+++++||+|||++.+|..+++|+|+|++|. ++
T Consensus 58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~-~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~-~~ 135 (159)
T PF03031_consen 58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG-SYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFF-GD 135 (159)
T ss_dssp -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT-EEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----S-SC
T ss_pred EeehhhhhhHHHHhhhhhcccccccccccccccccc-ccccchHHHhhccccEEEEeCCHHHeeccCCceEEecccc-CC
Confidence 999999999999999995 68999999999986543 5589999999999999999999999999999999999998 77
Q ss_pred -CCcHHHHHHHHHHHHhcccCCCch
Q 022266 254 -PHDNQLLNVLLPLLKHLSLQKDVR 277 (300)
Q Consensus 254 -~~D~~Ll~~l~~~L~~L~~~~DVR 277 (300)
++|++|+. |+++|++|+.++|||
T Consensus 136 ~~~D~~L~~-l~~~L~~l~~~~Dvr 159 (159)
T PF03031_consen 136 TPNDRELLR-LLPFLEELAKEDDVR 159 (159)
T ss_dssp HTT--HHHH-HHHHHHHHHTHS-CH
T ss_pred CcchhHHHH-HHHHHHHhCcccCCC
Confidence 78999987 999999999999998
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=4.4e-31 Score=247.84 Aligned_cols=158 Identities=32% Similarity=0.497 Sum_probs=145.7
Q ss_pred cccccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhh
Q 022266 87 VSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLS 166 (300)
Q Consensus 87 ~~~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~ 166 (300)
.++..+++.||||||.++|||..|+- ..+|.+++|||++.||.+|+
T Consensus 182 ~pPy~Qp~yTLVleledvLVhpdws~----------------------------------~tGwRf~kRPgvD~FL~~~a 227 (393)
T KOG2832|consen 182 PPPYEQPPYTLVLELEDVLVHPDWSY----------------------------------KTGWRFKKRPGVDYFLGHLA 227 (393)
T ss_pred CCcccCCCceEEEEeeeeEeccchhh----------------------------------hcCceeccCchHHHHHHhhc
Confidence 56788899999999999999976531 02467889999999999999
Q ss_pred hcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 167 EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 167 ~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
++|||||||+....||.++++.+||+++++++|+|++|.+. ++.++|||++||||++++|+||-.+.++.+||+|.|++
T Consensus 228 ~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~-~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l 306 (393)
T KOG2832|consen 228 KYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE-EGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPL 306 (393)
T ss_pred ccceEEEEecCCccchhhhHhhcCCcceEEEEEecCccccc-CccchhhhhhhccccceeEEEEccccccccCccccccc
Confidence 99999999999999999999999999999999999998775 58999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcc--cCCCchHHHh
Q 022266 247 IPFSAGQPHDNQLLNVLLPLLKHLS--LQKDVRPELY 281 (300)
Q Consensus 247 ~~f~~g~~~D~~Ll~~l~~~L~~L~--~~~DVR~~L~ 281 (300)
++|. |+.+|..|++ |++||+.++ +++|||++|+
T Consensus 307 ~~W~-Gn~dDt~L~d-L~~FL~~ia~~~~eDvR~vL~ 341 (393)
T KOG2832|consen 307 EPWS-GNDDDTSLFD-LLAFLEYIAQQQVEDVRPVLQ 341 (393)
T ss_pred CcCC-CCcccchhhh-HHHHHHHHHHccHHHHHHHHH
Confidence 9997 9988999999 999999987 5799999995
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=1.8e-30 Score=222.79 Aligned_cols=144 Identities=26% Similarity=0.366 Sum_probs=113.0
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhc--c--cc--ccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHH
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRN--Q--AT--GAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQ 164 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~--~--~~--~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~ 164 (300)
..+|++||||||||||||............ + .. ..+...|.+. ....++++|||+.+||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-------------~~~~~v~~rPgv~efL~~ 69 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG-------------TMWYLTKLRPFLHEFLKE 69 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC-------------CeEEEEEECCCHHHHHHH
Confidence 358999999999999998764433221110 0 00 0011112111 135789999999999999
Q ss_pred hhhcceEEEEcCCchhhHHHHHHHhcCCC-ceeE-EEecCCccccCCCccccccc-CCCCCCCcEEEEEcCccccccCCC
Q 022266 165 LSEFADLILFTAGLEGYARPLVDRIDGEN-LFSL-RLYRPSTTSTEYREHVKDLS-CLSKDLCRTLIVDNNPFSFLLQPL 241 (300)
Q Consensus 165 l~~~yevvI~Ta~~~~YA~~vl~~LDp~~-~f~~-~l~r~~c~~~~~~~~~KdL~-~L~rdl~~~ViVDDs~~~~~~~p~ 241 (300)
+++.|+++|||++.+.||+++++.|||.+ +|.+ +++|++|. +.++|||+ .++++++++|||||++.+|..||+
T Consensus 70 l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~----~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~ 145 (156)
T TIGR02250 70 ASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG----SPHTKSLLRLFPADESMVVIIDDREDVWPWHKR 145 (156)
T ss_pred HHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC----CCccccHHHHcCCCcccEEEEeCCHHHhhcCcc
Confidence 99999999999999999999999999996 7844 57799985 57899995 468999999999999999999999
Q ss_pred CCccccCCCC
Q 022266 242 NGIPCIPFSA 251 (300)
Q Consensus 242 NgI~I~~f~~ 251 (300)
|||+|++|.+
T Consensus 146 N~i~i~~~~~ 155 (156)
T TIGR02250 146 NLIQIEPYNY 155 (156)
T ss_pred CEEEeCCccc
Confidence 9999999963
No 7
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=1.4e-26 Score=196.36 Aligned_cols=146 Identities=41% Similarity=0.564 Sum_probs=118.9
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcceEE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI 172 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yevv 172 (300)
+|++|||||||||||+...+..+..... +. ...........+++.+|||+.|||++|++.|+++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~---------~~-------~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~ 64 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRD---------FI-------VPVLIDGHPHGVYVKKRPGVDEFLKRASELFELV 64 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccc---------eE-------EEEEeCCceEEEEEEECCCHHHHHHHHHhccEEE
Confidence 5899999999999998653322211110 10 1111122234678899999999999999889999
Q ss_pred EEcCCchhhHHHHHHHhcCCC-ceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccccCCCC
Q 022266 173 LFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA 251 (300)
Q Consensus 173 I~Ta~~~~YA~~vl~~LDp~~-~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~~ 251 (300)
|||++.+.||+.+++++++.+ +|..++++++|...+.. +.|+|+.+|.+++++|+|||++..+..++.|||.|++|.
T Consensus 65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~- 142 (148)
T smart00577 65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWF- 142 (148)
T ss_pred EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcC-
Confidence 999999999999999999965 46889999999877654 999999999999999999999999999999999999998
Q ss_pred CCCCc
Q 022266 252 GQPHD 256 (300)
Q Consensus 252 g~~~D 256 (300)
|+++|
T Consensus 143 ~~~~d 147 (148)
T smart00577 143 GDPDD 147 (148)
T ss_pred CCCCC
Confidence 77766
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.92 E-value=1.9e-25 Score=214.52 Aligned_cols=183 Identities=38% Similarity=0.529 Sum_probs=155.4
Q ss_pred ccCCCCCCcccccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccH
Q 022266 79 VRDSGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGL 158 (300)
Q Consensus 79 ~~~~~~~~~~~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl 158 (300)
+.+...++.......+++|++|||+||+|+..... +. .+ |.. ..++......+||.+|||+
T Consensus 197 ~~~~l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~-~~----------~d-f~~-------~~e~~~~~~~~~v~kRp~l 257 (390)
T COG5190 197 GIDTLEPPVSKSTSPKKTLVLDLDETLVHSSFRYI-TL----------LD-FLV-------KVEISLLQHLVYVSKRPEL 257 (390)
T ss_pred ccccccchhhcCCCCccccccCCCccceeeccccc-cc----------cc-hhh-------ccccccceeEEEEcCChHH
Confidence 33566677778889999999999999999854211 00 01 211 1222223357899999999
Q ss_pred HHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCcccccc
Q 022266 159 REFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLL 238 (300)
Q Consensus 159 ~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~ 238 (300)
++|+..+++.|++++||++.+.||++|++.|++.+.|.+++||.+|.... +.|+|||.++++++.++|+||++|.+|..
T Consensus 258 ~~fl~~ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~-G~~ikDis~i~r~l~~viiId~~p~SY~~ 336 (390)
T COG5190 258 DYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVSYL-GVYIKDISKIGRSLDKVIIIDNSPASYEF 336 (390)
T ss_pred HHHHhhhhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccceecc-CchhhhHHhhccCCCceEEeeCChhhhhh
Confidence 99999999999999999999999999999999999999999999998876 45999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCcHHHHHHHHHHHHhccc--CCCchHHHhhc
Q 022266 239 QPLNGIPCIPFSAGQPHDNQLLNVLLPLLKHLSL--QKDVRPELYER 283 (300)
Q Consensus 239 ~p~NgI~I~~f~~g~~~D~~Ll~~l~~~L~~L~~--~~DVR~~L~~~ 283 (300)
+|+|+|++.+|. +++.|++|++ ++++|+.|.. ..||+..+..+
T Consensus 337 ~p~~~i~i~~W~-~d~~d~el~~-ll~~le~L~~~~~~d~~~~l~~~ 381 (390)
T COG5190 337 HPENAIPIEKWI-SDEHDDELLN-LLPFLEDLPDRDLKDVSSILQSR 381 (390)
T ss_pred CccceeccCccc-ccccchhhhh-hcccccccccccchhhhhhhhhh
Confidence 999999999997 8888999998 9999999997 89999998543
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.68 E-value=1e-16 Score=162.02 Aligned_cols=151 Identities=25% Similarity=0.230 Sum_probs=105.9
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcceEE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI 172 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yevv 172 (300)
.++.||+|||.||+|+...+.+.+.......+ .+..+....-...+.......+|+++|||+.+||+++++.||+.
T Consensus 145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~----~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemh 220 (635)
T KOG0323|consen 145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEE----AESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMH 220 (635)
T ss_pred hcceeehhhhhHHHHhhccchhhhhhhhcccc----cccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeE
Confidence 44799999999999986644433322100000 00000000000000001113589999999999999999999999
Q ss_pred EEcCCchhhHHHHHHHhcCCC-ceeEE-EecCCccccCCCcccccccCCC-CCCCcEEEEEcCccccccCCCCCccccCC
Q 022266 173 LFTAGLEGYARPLVDRIDGEN-LFSLR-LYRPSTTSTEYREHVKDLSCLS-KDLCRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 173 I~Ta~~~~YA~~vl~~LDp~~-~f~~~-l~r~~c~~~~~~~~~KdL~~L~-rdl~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
|||.|.+.||..|.+.|||++ +|..| ++|+.- ...-.+||..+. ++.+++|||||+..+|..++.|.|.|.+|
T Consensus 221 VyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~----~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y 296 (635)
T KOG0323|consen 221 VYTMGTRDYALEIAKLIDPEGKYFGDRIISRDES----PFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPY 296 (635)
T ss_pred EEeccchHHHHHHHHHhCCCCccccceEEEecCC----CcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeee
Confidence 999999999999999999986 78655 567661 123456777663 66788999999999999999999999997
Q ss_pred CC
Q 022266 250 SA 251 (300)
Q Consensus 250 ~~ 251 (300)
.+
T Consensus 297 ~y 298 (635)
T KOG0323|consen 297 PY 298 (635)
T ss_pred ec
Confidence 64
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.91 E-value=2.9e-09 Score=93.08 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=79.4
Q ss_pred EEEeCccHHHHHHHhhhc-ceEEEEcCC-chhhHHHHHHHhcCC---------CceeEEEecCCccccCCC-cccccccC
Q 022266 151 TVFERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRIDGE---------NLFSLRLYRPSTTSTEYR-EHVKDLSC 218 (300)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yevvI~Ta~-~~~YA~~vl~~LDp~---------~~f~~~l~r~~c~~~~~~-~~~KdL~~ 218 (300)
-+..+||+.++|+.|++. +.+.|.|++ ...+++.+++.++.. .+|..++..+.....+.. ...+.+..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 367899999999999876 999999998 999999999999877 788888776653221111 22333333
Q ss_pred C---CCCCCcEEEEEcCccccccCCCCCccccCCCCCC
Q 022266 219 L---SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ 253 (300)
Q Consensus 219 L---~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~~g~ 253 (300)
. |-+++++++|||++.....-..+|+.+--...|.
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 2 5789999999999999988888999887665454
No 11
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.80 E-value=2.8e-09 Score=97.42 Aligned_cols=101 Identities=12% Similarity=0.140 Sum_probs=85.2
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|++. +.++|-|++...+++.+++.++..++|..++..+++...+.. .+.+-++.++.+++++|+
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~ 186 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFV 186 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEE
Confidence 45789999999999876 999999999999999999999999999999998877544433 567788888999999999
Q ss_pred EEcCccccccCCCCCccccCCCCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPFSAG 252 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f~~g 252 (300)
|+|++.-......+|+.+--...|
T Consensus 187 vgDs~~Di~aA~~aGi~~i~v~~g 210 (248)
T PLN02770 187 FEDSVSGIKAGVAAGMPVVGLTTR 210 (248)
T ss_pred EcCCHHHHHHHHHCCCEEEEEeCC
Confidence 999998887777788876654333
No 12
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.76 E-value=5.1e-09 Score=92.95 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=81.1
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|++. +.++|.|++...+++.+++.++-.++|..++..+++...+. ..+.+-++.++.+++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 160 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM 160 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence 45789999999999875 99999999999999999999999999999988887654433 2566777778888999999
Q ss_pred EEcCccccccCCCCCcccc
Q 022266 229 VDNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~ 247 (300)
|+|++.-......+|+..-
T Consensus 161 iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 161 VGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred ECCCHHHHHHHHHCCCeEE
Confidence 9999988877777888654
No 13
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.74 E-value=7e-09 Score=85.85 Aligned_cols=82 Identities=17% Similarity=0.019 Sum_probs=64.5
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCC-chhhHHHHHHHhc-------CCCceeEEEecCCccccCCCcccccccCCC--C
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRID-------GENLFSLRLYRPSTTSTEYREHVKDLSCLS--K 221 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~-~~~YA~~vl~~LD-------p~~~f~~~l~r~~c~~~~~~~~~KdL~~L~--r 221 (300)
...||+.++|+++++. +.++|.|++ .+.++..+++... ..++|..+...+.. .+...+.+-++.+| .
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~--pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL--PKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC--cHHHHHHHHHHHhcCCC
Confidence 3689999999999875 999999999 8999999999877 45566665544332 22335667777788 8
Q ss_pred CCCcEEEEEcCcccc
Q 022266 222 DLCRTLIVDNNPFSF 236 (300)
Q Consensus 222 dl~~~ViVDDs~~~~ 236 (300)
+++++++|||++...
T Consensus 107 ~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 107 KPKSILFVDDRPDNN 121 (128)
T ss_pred CcceEEEECCCHhHH
Confidence 999999999998753
No 14
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.72 E-value=1.1e-08 Score=94.73 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=83.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|++. +.++|.|++...+++.+++.++-..+|..++..+++...+.. .+.+-++++|.+++++|+
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~ 187 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV 187 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence 44789999999999976 999999999999999999999988899999998877544443 577788889999999999
Q ss_pred EEcCccccccCCCCCccccCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|+..-......+|+.+.-.
T Consensus 188 IgDs~~Di~aA~~aG~~~i~v 208 (260)
T PLN03243 188 FGNSNSSVEAAHDGCMKCVAV 208 (260)
T ss_pred EcCCHHHHHHHHHcCCEEEEE
Confidence 999999887777788766544
No 15
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.72 E-value=4.8e-09 Score=94.65 Aligned_cols=94 Identities=16% Similarity=0.045 Sum_probs=79.7
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|+.|++. +.++|-|++...+++..++.++-.++|+.++..++....+.. .|.+-++++|-+++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 171 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF 171 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 45789999999999986 999999999999999999998888889988877765544433 566777889999999999
Q ss_pred EEcCccccccCCCCCcc
Q 022266 229 VDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~ 245 (300)
|+|++........+|+.
T Consensus 172 igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 172 IDDSEPILDAAAQFGIR 188 (224)
T ss_pred EcCCHHHHHHHHHcCCe
Confidence 99999888777778885
No 16
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.70 E-value=5.2e-09 Score=92.25 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=80.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|.+. +.++|.|++...+++.+++.++..++|..+++.+++...+.. .+.+-+++++-+.+++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 45789999999999876 999999999999999999999998999988888776443332 456667778889999999
Q ss_pred EEcCccccccCCCCCcccc
Q 022266 229 VDNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~ 247 (300)
|+|++.-......+|+.+.
T Consensus 154 igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATV 172 (205)
T ss_pred EcCCHHHHHHHHHcCCeEE
Confidence 9999987777777888754
No 17
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.69 E-value=1.3e-08 Score=91.76 Aligned_cols=96 Identities=13% Similarity=0.090 Sum_probs=79.4
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|++. +.++|-|++...++..+++.++-.++|..+...+++...+.. .+.+-++++|-+++++++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~ 173 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY 173 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 56899999999999886 899999999999999999999888888887777765443333 566777888999999999
Q ss_pred EEcCccccccCCCCCcccc
Q 022266 229 VDNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~ 247 (300)
|+|++.-...-...|+.+-
T Consensus 174 IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 174 VGDDERDILAARAAGMPSV 192 (229)
T ss_pred eCCCHHHHHHHHHCCCcEE
Confidence 9999987766666777653
No 18
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.68 E-value=1.3e-08 Score=87.04 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=73.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|+.+++. +.++|.|++...+ ..++.+++..++|..+++.+++...+.. .|.+-++.+|.+++++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 45789999999999975 9999999999998 7777778888889998887766544433 456667778889999999
Q ss_pred EEcCccccccCCCCCc
Q 022266 229 VDNNPFSFLLQPLNGI 244 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI 244 (300)
|||++.....-...|+
T Consensus 163 vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 163 VDDSPAGIEAAKAAGM 178 (183)
T ss_pred EcCCHHHHHHHHHcCC
Confidence 9999976655555555
No 19
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.66 E-value=1.6e-08 Score=89.06 Aligned_cols=98 Identities=18% Similarity=0.160 Sum_probs=80.8
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+..+||+.++|+.|++. +.++|.|++...+++.++++++-.++|..++..+.....+.. .+.+-++.+|.+++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence 46899999999999876 999999999999999999999988889888777654433322 466778888999999999
Q ss_pred EEcCccccccCCCCCccccCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|++.-...-...|+.+-..
T Consensus 164 igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEE
Confidence 999998877766777766544
No 20
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.66 E-value=5.8e-09 Score=90.45 Aligned_cols=91 Identities=22% Similarity=0.253 Sum_probs=74.1
Q ss_pred EeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccc----cCC--CcccccccCCCCCCCcE
Q 022266 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEY--REHVKDLSCLSKDLCRT 226 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~----~~~--~~~~KdL~~L~rdl~~~ 226 (300)
...||+.++|++|+ +.++|.|++...++..+++.++..++|+.++..++... .+. ..|.+-++.+|.+++++
T Consensus 84 ~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 161 (184)
T TIGR01993 84 KPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPERA 161 (184)
T ss_pred CCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccce
Confidence 46799999999998 68999999999999999999988889998888765433 132 35667778889999999
Q ss_pred EEEEcCccccccCCCCCcc
Q 022266 227 LIVDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 227 ViVDDs~~~~~~~p~NgI~ 245 (300)
++|+|++........+|+.
T Consensus 162 l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 162 IFFDDSARNIAAAKALGMK 180 (184)
T ss_pred EEEeCCHHHHHHHHHcCCE
Confidence 9999999776655566664
No 21
>PRK11587 putative phosphatase; Provisional
Probab=98.65 E-value=1.3e-08 Score=90.89 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=77.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|+.|.+. +.++|-|++...++..+++.... ..|..++..+++...+. ..+.+-++.+|..++++|+
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ 160 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV 160 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEE
Confidence 45789999999999876 99999999999888888877665 34666666665543333 2567788889999999999
Q ss_pred EEcCccccccCCCCCccccCCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f~ 250 (300)
|+|++.........|+..--+.
T Consensus 161 igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 161 VEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EecchhhhHHHHHCCCEEEEEC
Confidence 9999988877777787655554
No 22
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.64 E-value=2.3e-08 Score=97.18 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=83.7
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
...||+.+||+.|.+. +.++|-|++...+++.+++.++..++|+.++..+++...+.. .|.+-++.+|.+++++|+|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 4689999999999886 999999999999999999999999999999999887644433 6777888899999999999
Q ss_pred EcCccccccCCCCCccccCCC
Q 022266 230 DNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I~~f~ 250 (300)
+|+.........+|+.+--..
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999988777777777655443
No 23
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.63 E-value=1.6e-07 Score=78.02 Aligned_cols=150 Identities=21% Similarity=0.123 Sum_probs=103.9
Q ss_pred EEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ceEEEE
Q 022266 96 TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLILF 174 (300)
Q Consensus 96 tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yevvI~ 174 (300)
.+|||+|+||.+....|++.+..+-- +++.++..+ +.-|.++|++.+||+++..- |-+..+
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rV-------------s~n~i~Ds~-----G~ev~L~~~v~~~l~warnsG~i~~~~ 63 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRV-------------SSNTIEDSK-----GREVHLFPDVKETLKWARNSGYILGLA 63 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceec-------------CccceecCC-----CeEEEEcHHHHHHHHHHHhCCcEEEEe
Confidence 58999999999776667665543211 111111111 23478999999999999986 999999
Q ss_pred cCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCC------CCCCCcEEEEEcCcccccc---CCCCCcc
Q 022266 175 TAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL------SKDLCRTLIVDNNPFSFLL---QPLNGIP 245 (300)
Q Consensus 175 Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L------~rdl~~~ViVDDs~~~~~~---~p~NgI~ 245 (300)
|...+.-|-++++.+|...+|.+.....+- .+..+..+-|..+ .-.++++|.+||+...+.. .-+|.=.
T Consensus 64 sWN~~~kA~~aLral~~~~yFhy~ViePhP--~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~ 141 (164)
T COG4996 64 SWNFEDKAIKALRALDLLQYFHYIVIEPHP--YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKC 141 (164)
T ss_pred ecCchHHHHHHHHHhchhhhEEEEEecCCC--hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeee
Confidence 999999999999999999999998887763 2333444444444 2468999999999987642 4445444
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHhc
Q 022266 246 CIPFSAGQPHDNQLLNVLLPLLKHL 270 (300)
Q Consensus 246 I~~f~~g~~~D~~Ll~~l~~~L~~L 270 (300)
++.|. |-+...++.++|...
T Consensus 142 ~~~~~-----Di~c~~ei~slLs~~ 161 (164)
T COG4996 142 LEMWK-----DISCYSEIFSLLSHV 161 (164)
T ss_pred eEeec-----chHHHHHHHHHHHhh
Confidence 45553 445444466666543
No 24
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.62 E-value=1.4e-07 Score=77.54 Aligned_cols=92 Identities=12% Similarity=0.143 Sum_probs=66.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCc--------hhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCC-CC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL-SK 221 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~--------~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L-~r 221 (300)
....||+.++|++|.+. +.++|.|++. ..+++.+++.++.. +...++...+...+...+.+-++.+ +.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPHCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence 34789999999999876 9999999999 88899999988765 2223333322222223566777778 58
Q ss_pred CCCcEEEEEc-CccccccCCCCCcc
Q 022266 222 DLCRTLIVDN-NPFSFLLQPLNGIP 245 (300)
Q Consensus 222 dl~~~ViVDD-s~~~~~~~p~NgI~ 245 (300)
+++++++|+| +..-......+|+.
T Consensus 102 ~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 102 DPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ChhheEEEcCCCcccHHHHHHCCCe
Confidence 9999999999 57666555555653
No 25
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.61 E-value=2.2e-08 Score=86.22 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=74.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|+.|.+. +.++|-|++ .+++.+++.++-.++|..++..+.+...+.. .+.+-++.++.+++++|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 46899999999999886 999999988 7899999998888889988887765443332 455667778889999999
Q ss_pred EEcCccccccCCCCCcc
Q 022266 229 VDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~ 245 (300)
|+|+.........+|+.
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999877666666664
No 26
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.60 E-value=2.5e-08 Score=86.25 Aligned_cols=92 Identities=10% Similarity=0.104 Sum_probs=77.1
Q ss_pred eCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEEEc
Q 022266 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViVDD 231 (300)
.-|+ .+.|+.+.+.+.++|-|++...+++.+++.++-.++|+.++..+++...+.. .+.+-+++++.+++++|+|+|
T Consensus 89 ~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igD 167 (188)
T PRK10725 89 PLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167 (188)
T ss_pred CccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence 4576 4899999888999999999999999999999988899999998876554443 466777888989999999999
Q ss_pred CccccccCCCCCccc
Q 022266 232 NPFSFLLQPLNGIPC 246 (300)
Q Consensus 232 s~~~~~~~p~NgI~I 246 (300)
++.-+.....+|+.+
T Consensus 168 s~~di~aA~~aG~~~ 182 (188)
T PRK10725 168 ADFGIQAARAAGMDA 182 (188)
T ss_pred cHhhHHHHHHCCCEE
Confidence 998887777777754
No 27
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.58 E-value=5.9e-08 Score=90.44 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=74.6
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDD 231 (300)
...||+.++|++|++. +.++|.|++...+++.+++.++..++|..+...+... .+...+.+-++.++.+++++++|+|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 4679999999999876 8999999999999999999999888998876655432 2222444555667888899999999
Q ss_pred CccccccCCCCCcccc
Q 022266 232 NPFSFLLQPLNGIPCI 247 (300)
Q Consensus 232 s~~~~~~~p~NgI~I~ 247 (300)
++.-...-..+|+.+-
T Consensus 221 s~~Di~aA~~AG~~~I 236 (273)
T PRK13225 221 ETRDVEAARQVGLIAV 236 (273)
T ss_pred CHHHHHHHHHCCCeEE
Confidence 9987766666777654
No 28
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.56 E-value=4.8e-08 Score=90.72 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=76.2
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
...+||+.++|+.+++. +.++|.|++...+++.+++.++-.++|..+.+.+.+...+.. .+.+-++.+|.+++++|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 34789999999999875 999999999999999999998888888887777655433322 355666778889999999
Q ss_pred EEcCccccccCCCCCcc
Q 022266 229 VDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~ 245 (300)
|+|+..-...-..+|+.
T Consensus 180 IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred ECCCHHHHHHHHHCCCe
Confidence 99999887766667764
No 29
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.55 E-value=1.1e-07 Score=75.83 Aligned_cols=87 Identities=20% Similarity=0.196 Sum_probs=62.4
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCcccc----------------CCC--cc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST----------------EYR--EH 212 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~----------------~~~--~~ 212 (300)
...+|++.++|+.+.+. +.++|.|++...+++.+++.+.....+..++..+..... +.+ .+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence 45899999999999997 999999999999999999998765555555544432211 111 22
Q ss_pred cccccCCCCCCCcEEEEEcCcccccc
Q 022266 213 VKDLSCLSKDLCRTLIVDNNPFSFLL 238 (300)
Q Consensus 213 ~KdL~~L~rdl~~~ViVDDs~~~~~~ 238 (300)
.+-++.++.+.+.+++|+|+......
T Consensus 103 ~~~~~~~~~~~~~~~~igD~~~d~~~ 128 (139)
T cd01427 103 LAALKLLGVDPEEVLMVGDSLNDIEM 128 (139)
T ss_pred HHHHHHcCCChhhEEEeCCCHHHHHH
Confidence 23344456668899999999865443
No 30
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.52 E-value=8.4e-08 Score=85.68 Aligned_cols=99 Identities=12% Similarity=0.037 Sum_probs=82.4
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
....||+.++|+.+++. +.++|.|++....++.+++.++-.++|..++.++.....+.. .+..-++.+|.+++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVA 170 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 34789999999999876 999999999999999999999988999998888765443332 566777888999999999
Q ss_pred EEcCccccccCCCCCccccCCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f~ 250 (300)
|+|++.-.......|+..--..
T Consensus 171 igDs~~Di~aA~~aG~~~i~v~ 192 (222)
T PRK10826 171 LEDSFNGMIAAKAARMRSIVVP 192 (222)
T ss_pred EcCChhhHHHHHHcCCEEEEec
Confidence 9999988877777887665443
No 31
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.51 E-value=4.9e-08 Score=86.74 Aligned_cols=95 Identities=11% Similarity=0.079 Sum_probs=77.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC--CceeEEEecCCccccCC--CcccccccCCCCC-CCc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLYRPSTTSTEY--REHVKDLSCLSKD-LCR 225 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~--~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rd-l~~ 225 (300)
....||+.++|++|++. +.++|-|++...+++.+++.++.. .+|..++..++-...+. ..+.+-+++++.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 35889999999999865 999999999999999999999877 88888877765433332 2556667788876 799
Q ss_pred EEEEEcCccccccCCCCCccc
Q 022266 226 TLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 226 ~ViVDDs~~~~~~~p~NgI~I 246 (300)
+|+|+|++.-...-...|+.+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998777666777765
No 32
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.49 E-value=4.2e-07 Score=85.33 Aligned_cols=126 Identities=17% Similarity=0.107 Sum_probs=90.6
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeC-ccHHHHHHHhhhc-
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF- 168 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~- 168 (300)
-..++.+||||||||+...+ -+..| ||+.|.|++|.+.
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekG 162 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRG 162 (301)
T ss_pred cccceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCC
Confidence 34677999999999996411 04478 9999999999997
Q ss_pred ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC---------------ccccccc---CC-----------
Q 022266 169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS---CL----------- 219 (300)
Q Consensus 169 yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~---------------~~~KdL~---~L----------- 219 (300)
+.++|||++.+++++.+++.++..++|..++...+....+.. .++.|.. .|
T Consensus 163 ikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL 242 (301)
T TIGR01684 163 CILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYL 242 (301)
T ss_pred CEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHH
Confidence 899999999999999999999999999888777665433211 1233332 12
Q ss_pred ---CC-CCCcEEEEEcCccccccCCCCCccccCCCCCCCCcHH
Q 022266 220 ---SK-DLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258 (300)
Q Consensus 220 ---~r-dl~~~ViVDDs~~~~~~~p~NgI~I~~f~~g~~~D~~ 258 (300)
|- -.+.+-+|||-+.+ ..+-+|-+.|+..- .-.+|-+
T Consensus 243 ~~~gvn~~KtitLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~ 283 (301)
T TIGR01684 243 YDLGVNYFKSITLVDDLADN-NFNYDYFVNVSRCP-VPVNDWD 283 (301)
T ss_pred HHcCCceeeeEEEeccCccc-CccceeEEEeeeCC-CCchHHH
Confidence 11 14667899998875 34667888888774 3334433
No 33
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.49 E-value=5.5e-08 Score=87.75 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=87.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.+||+.|... .-+++-|++.+..++.+++.++...+|..+++.++....|.. .|.+-.++||.+++++|+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV 164 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence 45899999999999988 999999999999999999999999999999998877655443 788999999999999999
Q ss_pred EEcCccccccCCCCCccccCCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f~ 250 (300)
|||++.-...-..-|+.+--+.
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~ 186 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVP 186 (221)
T ss_pred EecchhHHHHHHHCCCEEEEec
Confidence 9999998777666777777665
No 34
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.48 E-value=2.3e-07 Score=78.20 Aligned_cols=91 Identities=18% Similarity=0.159 Sum_probs=61.9
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCch---------------hhHHHHHHHhcCCCceeEEEec-----CCc--cccCC
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR-----PST--TSTEY 209 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~---------------~YA~~vl~~LDp~~~f~~~l~r-----~~c--~~~~~ 209 (300)
...||+.++|+.|++. |.++|.|++.. .++..+++.++... ...++. +.. ...+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAV--DGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCce--eEEEECCCCCCCCCCCCCCCH
Confidence 5789999999999976 99999999874 46666777766541 112221 211 11122
Q ss_pred CcccccccCCCCCCCcEEEEEcCccccccCCCCCcc
Q 022266 210 REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 210 ~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~ 245 (300)
..+.+-++.++-+++++++|+|+..-.......|+.
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 245566677788999999999998766555555554
No 35
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.47 E-value=1e-07 Score=84.27 Aligned_cols=99 Identities=16% Similarity=-0.007 Sum_probs=74.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhh--HHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY--ARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT 226 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~Y--A~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ 226 (300)
+...||+.++|++|++. +.++|.|++.... +...+..++...+|+.++..+++...|.. .|.+-++++|.+++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 45789999999999976 9999999987655 33333334445678888776655443433 5667778889999999
Q ss_pred EEEEcCccccccCCCCCccccCCC
Q 022266 227 LIVDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 227 ViVDDs~~~~~~~p~NgI~I~~f~ 250 (300)
|+|||++.........|+..--+.
T Consensus 173 l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEC
Confidence 999999998877777888766554
No 36
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.46 E-value=5.5e-07 Score=78.04 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=64.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCch----hhH-----------HHHHHHhcCCCceeEEEecC-----------Cc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLE----GYA-----------RPLVDRIDGENLFSLRLYRP-----------ST 204 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~----~YA-----------~~vl~~LDp~~~f~~~l~r~-----------~c 204 (300)
+..-||+.++|++|++. |.++|.|++.. .++ ..++..+... |...+++. .|
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 34779999999999986 99999999985 233 3333333222 45555442 23
Q ss_pred cccCC--CcccccccCCCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 205 TSTEY--REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 205 ~~~~~--~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
...+. ..+.+-+++++-+++++++|+|++.-......+|+..
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcE
Confidence 22222 2566677888999999999999998777767777754
No 37
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.46 E-value=1.6e-07 Score=83.35 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=75.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~Vi 228 (300)
...+||+.+||+.+++. +.++|.|++...+++.+++.++-.++|...+..+++...+. ..+.+-++.++.+.+++|+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 45899999999999975 99999999999999999999988888887776665433332 2455667778889999999
Q ss_pred EEcCccccccCCCCCcc
Q 022266 229 VDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~ 245 (300)
|+|+......-...|+.
T Consensus 172 igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 172 VGDSRNDIQAARAAGCP 188 (226)
T ss_pred ECCCHHHHHHHHHCCCc
Confidence 99998877665566664
No 38
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.45 E-value=1.2e-06 Score=82.44 Aligned_cols=126 Identities=19% Similarity=0.132 Sum_probs=92.2
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeC-ccHHHHHHHhhhc-
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF- 168 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~- 168 (300)
...++.+|+||||||+...+ -+..| ||+.++|++|++.
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekG 164 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERG 164 (303)
T ss_pred eeeccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCC
Confidence 35778999999999997421 04578 9999999999997
Q ss_pred ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC---------------Cccccccc---CCCC---------
Q 022266 169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY---------------REHVKDLS---CLSK--------- 221 (300)
Q Consensus 169 yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~---------------~~~~KdL~---~L~r--------- 221 (300)
+.++|+|++.+++++.+++.++..++|..++..++...... ..++.|.. .|..
T Consensus 165 ikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL 244 (303)
T PHA03398 165 CVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYL 244 (303)
T ss_pred CEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHH
Confidence 99999999999999999999999988887777766533220 12233444 2221
Q ss_pred ------CCCcEEEEEcCccccccCCCCCccccCCCCCCCCcHH
Q 022266 222 ------DLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258 (300)
Q Consensus 222 ------dl~~~ViVDDs~~~~~~~p~NgI~I~~f~~g~~~D~~ 258 (300)
-.+.+-+|||-+.+ ..+-+|-+.|+..- .-.+|-+
T Consensus 245 ~~~gvn~~KtiTLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~ 285 (303)
T PHA03398 245 RKKGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-EPVNDWD 285 (303)
T ss_pred HHcCcceeccEEEeccCccc-CccceeEEEeeeCC-CCcHHHH
Confidence 24667899998876 46788888888884 3334433
No 39
>PLN02940 riboflavin kinase
Probab=98.41 E-value=1.3e-07 Score=92.15 Aligned_cols=97 Identities=11% Similarity=0.161 Sum_probs=80.1
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHH-HhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD-RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~-~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~V 227 (300)
+...||+.++|++|++. +.++|-|++...+++.+++ ..+-.++|+.++..+++...+.. .+.+-++.+|-+++++|
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 34689999999999887 9999999999999999887 56777899999998887554433 56777888899999999
Q ss_pred EEEcCccccccCCCCCccccC
Q 022266 228 IVDNNPFSFLLQPLNGIPCIP 248 (300)
Q Consensus 228 iVDDs~~~~~~~p~NgI~I~~ 248 (300)
+|+|+..........|+.+--
T Consensus 172 ~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 172 VIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred EEeCCHHHHHHHHHcCCEEEE
Confidence 999999887766677776443
No 40
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.41 E-value=1.6e-08 Score=90.01 Aligned_cols=96 Identities=8% Similarity=0.083 Sum_probs=76.9
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCcee-EEEecCCccccCC--CcccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~-~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|+.|. +.++|.|++.+.+++.+++..+...+|. .+++.++....+. ..+.+-++++|.+++++|+
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 457899999999994 8999999999999999999998888885 5666655543333 2566778888989999999
Q ss_pred EEcCccccccCCCCCccccCC
Q 022266 229 VDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|++.........|+.+.-+
T Consensus 165 igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EeCcHhhHHHHHHCCCEEEEE
Confidence 999998877767778766533
No 41
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.36 E-value=1.4e-06 Score=75.60 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=64.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCch---------------hhHHHHHHHhcCCCceeEEEecCCc-----cccCC-
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYRPST-----TSTEY- 209 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~---------------~YA~~vl~~LDp~~~f~~~l~r~~c-----~~~~~- 209 (300)
+...||+.++|++|++. |.++|.|++.. .+...+++.++. .|..+++...+ ...+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence 34789999999999987 99999999863 233344444432 36666654332 22222
Q ss_pred -CcccccccCCCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 210 -REHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 210 -~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
..+.+-++.+|.+++++++|+|++.-...-...|+.+
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~ 143 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 2566777888999999999999998776666667643
No 42
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.34 E-value=7.2e-07 Score=84.73 Aligned_cols=111 Identities=23% Similarity=0.121 Sum_probs=80.0
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ceE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yev 171 (300)
.+|+||+|||+||+...-.. ....|.. .....||+.++|+.|++. +.+
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e--------------------------~g~~~i~-----~~~~~~~~~e~L~~L~~~Gi~l 50 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGE--------------------------DGIDNLN-----LSPLHKTLQEKIKTLKKQGFLL 50 (320)
T ss_pred CeEEEEEcCCCCCCCCEEcc--------------------------CCccccc-----cCccHHHHHHHHHHHHhCCCEE
Confidence 58999999999999642100 0111110 012478999999999986 899
Q ss_pred EEEcCCchhhHHHHHHH----hcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccc
Q 022266 172 ILFTAGLEGYARPLVDR----IDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL 237 (300)
Q Consensus 172 vI~Ta~~~~YA~~vl~~----LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~ 237 (300)
.|.|++.+..|..+++. +....+|...... ...+.....+-++.+|-+++.+|+|||++....
T Consensus 51 ai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~ 117 (320)
T TIGR01686 51 ALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERA 117 (320)
T ss_pred EEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHH
Confidence 99999999999999998 7666677665332 122323555666778999999999999998654
No 43
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.34 E-value=1.3e-06 Score=75.23 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=74.8
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCC---------------chhhHHHHHHHhcCCCceeEEEec-----CCccccCCC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR 210 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~---------------~~~YA~~vl~~LDp~~~f~~~l~r-----~~c~~~~~~ 210 (300)
+..-||+.++|++|.+. |.++|.|+. ...++..+++.++.. |..++++ +++...+..
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~ 105 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK 105 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 56789999999999986 999999996 356888888888886 7666654 454433332
Q ss_pred --cccccccCCCCCCCcEEEEEcCccccccCCCCCccccCCCC
Q 022266 211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA 251 (300)
Q Consensus 211 --~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~~ 251 (300)
.+..-++..+.+++++++|.|+..-......+|+..--+..
T Consensus 106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence 34445566788999999999998777777788888777753
No 44
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.31 E-value=9.1e-07 Score=78.53 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=69.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEec-----------CCcccc-CCCcccccccC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-----------PSTTST-EYREHVKDLSC 218 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r-----------~~c~~~-~~~~~~KdL~~ 218 (300)
+..+||+.+||+.+.+. +.++|.|++...+++.+++.++-..+|...+.. +.+... +...+.+-++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 34899999999999986 999999999999999999998876666543221 111110 22234445556
Q ss_pred CCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 219 LSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 219 L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
++.+.+++++|+|+..-...-...|+.+
T Consensus 164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 164 EGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred cCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 7888999999999988776655566765
No 45
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.29 E-value=1.9e-07 Score=81.76 Aligned_cols=98 Identities=16% Similarity=0.082 Sum_probs=71.8
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCC----ceeEEEecCCccccCCCcccccccCCCCCCCcEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~----~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~V 227 (300)
+...||+.++|++|++.+.+++-|++........++.+...+ +|+.++..+++.. +...+.+-++++| ++.+|
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~--~~~~v 149 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYG--DRVVC 149 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhC--CCcEE
Confidence 458999999999999888887777776665555666664433 5667777666532 3335556667777 67899
Q ss_pred EEEcCccccccCCCC--CccccCCCCC
Q 022266 228 IVDNNPFSFLLQPLN--GIPCIPFSAG 252 (300)
Q Consensus 228 iVDDs~~~~~~~p~N--gI~I~~f~~g 252 (300)
+|||+.........+ ||.+--+..|
T Consensus 150 ~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 150 FVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred EeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 999999998887888 9987776544
No 46
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.28 E-value=6e-07 Score=75.23 Aligned_cols=81 Identities=20% Similarity=0.146 Sum_probs=64.7
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
...||+.++|+.|.+. +.++|.|++.+..+..+++.+ ...+|..++..+++. .+.. .+.+-++.++.+. ++++|
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~i 140 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHV 140 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEE
Confidence 3569999999999765 999999999999999999996 456777777777665 4332 5666777788887 99999
Q ss_pred EcCcccc
Q 022266 230 DNNPFSF 236 (300)
Q Consensus 230 DDs~~~~ 236 (300)
+|++.-.
T Consensus 141 GDs~~Di 147 (154)
T TIGR01549 141 GDNLNDI 147 (154)
T ss_pred eCCHHHH
Confidence 9997543
No 47
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.27 E-value=1.6e-06 Score=75.39 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=67.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC------------cccccccC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR------------EHVKDLSC 218 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~------------~~~KdL~~ 218 (300)
+..+||+.++|+.+.+. +.++|.|++...+++.+++.++...+|...+..++....+.. .+.+-++.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~ 158 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE 158 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence 45899999999999876 999999999999999999999877777655443221111111 11122344
Q ss_pred CCCCCCcEEEEEcCccccccCCCCCccc
Q 022266 219 LSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 219 L~rdl~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
++.+.+++++|.|+..-...-...|+.+
T Consensus 159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 159 LNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred hCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 6778899999999987665555556644
No 48
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.24 E-value=2.5e-06 Score=74.33 Aligned_cols=83 Identities=18% Similarity=0.252 Sum_probs=53.2
Q ss_pred EEEeCccHHHHHHHhhhc-ceEEEEcC-CchhhHHHHHHHhcCC----------CceeEEEecCCccccCCCcccccc-c
Q 022266 151 TVFERPGLREFLKQLSEF-ADLILFTA-GLEGYARPLVDRIDGE----------NLFSLRLYRPSTTSTEYREHVKDL-S 217 (300)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yevvI~Ta-~~~~YA~~vl~~LDp~----------~~f~~~l~r~~c~~~~~~~~~KdL-~ 217 (300)
-+.+-|++.+.|+.|++. .+|++.|. ..++.|+++|+.++.. .+|.+.-.-.++ + ..+.+.| +
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs---K-~~Hf~~i~~ 118 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS---K-TTHFRRIHR 118 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS----H-HHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCc---h-HHHHHHHHH
Confidence 377999999999999986 99999995 5689999999999887 677665333332 1 2333433 3
Q ss_pred CCCCCCCcEEEEEcCccccc
Q 022266 218 CLSKDLCRTLIVDNNPFSFL 237 (300)
Q Consensus 218 ~L~rdl~~~ViVDDs~~~~~ 237 (300)
..|-+.+.++++||...+..
T Consensus 119 ~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 119 KTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp HH---GGGEEEEES-HHHHH
T ss_pred hcCCChhHEEEecCchhcce
Confidence 56889999999999987653
No 49
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.24 E-value=1.7e-06 Score=80.65 Aligned_cols=141 Identities=15% Similarity=0.084 Sum_probs=99.4
Q ss_pred CCCCCcccccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHH
Q 022266 82 SGDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREF 161 (300)
Q Consensus 82 ~~~~~~~~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eF 161 (300)
...|.......+++.+++|+||||......+. |+... ..-....||+.++
T Consensus 146 ~~~p~~~~~~~~~~~~~~D~dgtl~~~~~~~~----------------~~~~~--------------~~~~~~~~~~~~~ 195 (300)
T PHA02530 146 LVWPVYTADPGLPKAVIFDIDGTLAKMGGRSP----------------YDWTK--------------VKEDKPNPMVVEL 195 (300)
T ss_pred CCCceeccCCCCCCEEEEECCCcCcCCCCCCc----------------cchhh--------------cccCCCChhHHHH
Confidence 33444555556678999999999997432110 11100 0012379999999
Q ss_pred HHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC-ceeEEEecCC-------ccccCCC--cccccccCCCC-CCCcEEEE
Q 022266 162 LKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN-LFSLRLYRPS-------TTSTEYR--EHVKDLSCLSK-DLCRTLIV 229 (300)
Q Consensus 162 L~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~-~f~~~l~r~~-------c~~~~~~--~~~KdL~~L~r-dl~~~ViV 229 (300)
|+.+.+. +.++|.|+.....++.+++.++..+ +|..+...+. +...+.. ...+.|..++. +.+.+++|
T Consensus 196 l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~v 275 (300)
T PHA02530 196 VKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAV 275 (300)
T ss_pred HHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEE
Confidence 9999887 9999999999999999999999887 7776666552 2222222 34455666677 67999999
Q ss_pred EcCccccccCCCCCccccCCCCC
Q 022266 230 DNNPFSFLLQPLNGIPCIPFSAG 252 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I~~f~~g 252 (300)
||++.....-..+|+.+--...|
T Consensus 276 gD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 276 DDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred cCcHHHHHHHHHhCCeEEEecCC
Confidence 99999988888899876554334
No 50
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.18 E-value=1.1e-06 Score=87.31 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=74.4
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccc-cCCCcccccccCCCCCCCcEEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS-TEYREHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~-~~~~~~~KdL~~L~rdl~~~ViV 229 (300)
+...||+.++|++|++. +.+.|.|++...+++.+++.++-.++|..++..++... .+...+.+-++.++ ++++|+|
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~V 406 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVV 406 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEE
Confidence 45789999999999876 99999999999999999999998889999888776531 23334555555553 5889999
Q ss_pred EcCccccccCCCCCccc
Q 022266 230 DNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I 246 (300)
.|++.-...-...|+.+
T Consensus 407 GDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 407 GDRLSDINAAKDNGLIA 423 (459)
T ss_pred eCCHHHHHHHHHCCCeE
Confidence 99998877777777754
No 51
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.17 E-value=5.4e-06 Score=75.98 Aligned_cols=88 Identities=8% Similarity=0.081 Sum_probs=61.6
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCC----chhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~----~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~Vi 228 (300)
..|++.|||+++.+. +.++|-|+. .+.+++.+++.++..++|..++..+.....+.. |. ..+ ....-+|+
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~---~~-~~l-~~~~i~i~ 189 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYT---KT-QWI-QDKNIRIH 189 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCC---HH-HHH-HhCCCeEE
Confidence 445599999999987 999999998 667999999999888888777666654322211 11 111 12233789
Q ss_pred EEcCccccccCCCCCccc
Q 022266 229 VDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I 246 (300)
|-|+..-+.....+|+..
T Consensus 190 vGDs~~DI~aAk~AGi~~ 207 (237)
T TIGR01672 190 YGDSDNDITAAKEAGARG 207 (237)
T ss_pred EeCCHHHHHHHHHCCCCE
Confidence 999988776666666653
No 52
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.16 E-value=1.1e-06 Score=78.84 Aligned_cols=96 Identities=19% Similarity=0.179 Sum_probs=78.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
...-||+.+.|+.+++. |.+.|.|+.....++.+++.++-..+|..+...+++...+.. ....-+..+|.+++++|+
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~ 167 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALM 167 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEE
Confidence 35789999999999987 899999999999999999999999999988885554444333 445667778888779999
Q ss_pred EEcCccccccCCCCCcccc
Q 022266 229 VDNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I~ 247 (300)
|=|+..-...-..+|+...
T Consensus 168 VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 168 VGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred ECCCHHHHHHHHHcCCCEE
Confidence 9999998877777776543
No 53
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.15 E-value=7.1e-06 Score=71.00 Aligned_cols=78 Identities=10% Similarity=0.061 Sum_probs=54.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchh------------hHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEG------------YARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSC 218 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~------------YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~ 218 (300)
.-||+.+.|+.|.+. |.++|.|++... +++.+++.++... ...+..+.....+. ..+..-++.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~ 120 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQ 120 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHH
Confidence 459999999999875 999999998763 5677888877642 33333333222222 234444566
Q ss_pred CC--CCCCcEEEEEcCc
Q 022266 219 LS--KDLCRTLIVDNNP 233 (300)
Q Consensus 219 L~--rdl~~~ViVDDs~ 233 (300)
+| -+++++++|.|++
T Consensus 121 ~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 121 YNSPIKMTRSFYVGDAA 137 (166)
T ss_pred cCCCCCchhcEEEECCC
Confidence 67 7889999999997
No 54
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.15 E-value=4.5e-06 Score=90.94 Aligned_cols=97 Identities=9% Similarity=0.096 Sum_probs=81.9
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC-CceeEEEecCCccccCC--CcccccccCCCCCCCcEEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~-~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~ViV 229 (300)
..||+.++|++|++. +.++|.|++...+++.+++.++.. .+|..++..+++...+. ..|.+-++.++.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 479999999999886 999999999999999999999875 68899988887765443 36677888899999999999
Q ss_pred EcCccccccCCCCCccccCCC
Q 022266 230 DNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I~~f~ 250 (300)
+|++.........|+.+--..
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999988877777787666554
No 55
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.03 E-value=4.3e-06 Score=69.84 Aligned_cols=94 Identities=19% Similarity=0.257 Sum_probs=78.0
Q ss_pred EEEeCccHHHHHHHhh-hcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEE
Q 022266 151 TVFERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 151 ~v~~RPgl~eFL~~l~-~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~V 227 (300)
.....||+.++|+.++ +.+.++|.|++...+++.+++.+....+|..+++.+++...+.. .|.+-++.+|.+++++|
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4679999999999999 56999999999999999999999888899999888776655443 56667777899999999
Q ss_pred EEEcCccccccCCCCCc
Q 022266 228 IVDNNPFSFLLQPLNGI 244 (300)
Q Consensus 228 iVDDs~~~~~~~p~NgI 244 (300)
+|||++.....-...|+
T Consensus 155 ~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp EEESSHHHHHHHHHTTS
T ss_pred EEeCCHHHHHHHHHcCC
Confidence 99999976654444444
No 56
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.01 E-value=1.5e-05 Score=68.37 Aligned_cols=90 Identities=18% Similarity=0.283 Sum_probs=62.7
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCcccc--------------CC--Ccccc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST--------------EY--REHVK 214 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~--------------~~--~~~~K 214 (300)
+..+||+.++|+.+.+. +.++|.|++...+++.+++.++-..+|..++..+..... .. ....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 46899999999999886 999999999999999999998877778776654321100 00 01112
Q ss_pred --cccCCCCC-CCcEEEEEcCccccccCCC
Q 022266 215 --DLSCLSKD-LCRTLIVDNNPFSFLLQPL 241 (300)
Q Consensus 215 --dL~~L~rd-l~~~ViVDDs~~~~~~~p~ 241 (300)
-++.+... .+++|+|+|+..-+.....
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~ 180 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKL 180 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhc
Confidence 22222233 6889999999887654433
No 57
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.97 E-value=9.3e-06 Score=70.27 Aligned_cols=111 Identities=19% Similarity=0.184 Sum_probs=77.8
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-c
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A 169 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-y 169 (300)
..+-..+|+|+||||..... ...-||+.++|++|.+. +
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~~-----------------------------------------~~~~pgv~e~L~~Lk~~g~ 60 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPDH-----------------------------------------NEAYPALRDWIEELKAAGR 60 (170)
T ss_pred HCCCCEEEEecCCccccCCC-----------------------------------------CCcChhHHHHHHHHHHcCC
Confidence 34668899999999996310 12468999999999987 9
Q ss_pred eEEEEcCCc-hhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCcc-ccccCCCCCcccc
Q 022266 170 DLILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPF-SFLLQPLNGIPCI 247 (300)
Q Consensus 170 evvI~Ta~~-~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~-~~~~~p~NgI~I~ 247 (300)
.++|.|++. ...+..+++.++...++ ++.......+.+-++.++.+.+++++|+|+.. -......+|+..-
T Consensus 61 ~l~I~Sn~~~~~~~~~~~~~~gl~~~~-------~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 61 KLLIVSNNAGEQRAKAVEKALGIPVLP-------HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred EEEEEeCCchHHHHHHHHHHcCCEEEc-------CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEE
Confidence 999999998 67788877766543211 11122223556667778888999999999984 5555555666444
Q ss_pred CC
Q 022266 248 PF 249 (300)
Q Consensus 248 ~f 249 (300)
-.
T Consensus 134 ~v 135 (170)
T TIGR01668 134 LV 135 (170)
T ss_pred EE
Confidence 33
No 58
>PRK06769 hypothetical protein; Validated
Probab=97.94 E-value=1.3e-05 Score=69.62 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=62.1
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhh-----HHHHHHHhcCCCceeEEEe----cCCccccCC--CcccccccCCC
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGY-----ARPLVDRIDGENLFSLRLY----RPSTTSTEY--REHVKDLSCLS 220 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~Y-----A~~vl~~LDp~~~f~~~l~----r~~c~~~~~--~~~~KdL~~L~ 220 (300)
..-||+.++|++|++. |.++|.|++.... .......+...++.....+ .+.+...+. ..+.+-++.++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~ 107 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG 107 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4679999999999886 9999999986421 1123333333232222222 222222222 25677788889
Q ss_pred CCCCcEEEEEcCccccccCCCCCccccCC
Q 022266 221 KDLCRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 221 rdl~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
.+++++++|+|++.-.......|+.+--.
T Consensus 108 ~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 108 LDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 99999999999998776666666655433
No 59
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.94 E-value=8.3e-06 Score=72.24 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=78.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|.+. +.++|.|++...++...++.++...+|..++..++....+.. .+.+-++.+|-+.+++|+
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 172 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVM 172 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence 56899999999999987 999999999999999999999998899998888776544433 567778889999999999
Q ss_pred EEcCc-cccccCCCCCcccc
Q 022266 229 VDNNP-FSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~-~~~~~~p~NgI~I~ 247 (300)
|+|++ .-.......|+...
T Consensus 173 igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 173 VGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred ECCChHHHHHHHHHCCCEEE
Confidence 99998 45544455565433
No 60
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.90 E-value=0.0001 Score=68.75 Aligned_cols=124 Identities=18% Similarity=0.163 Sum_probs=85.9
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEE-eCccHHHHHHHhhhc-c
Q 022266 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVF-ERPGLREFLKQLSEF-A 169 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~-~RPgl~eFL~~l~~~-y 169 (300)
..+-.+|||||+|||..... +. .=|.+-+-|.++++. .
T Consensus 120 ~~phVIVfDlD~TLItd~~~----------------------------------------v~Ir~~~v~~sL~~Lk~~g~ 159 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD----------------------------------------VRIRDPAVYDSLRELKEQGC 159 (297)
T ss_pred CCCcEEEEECCCcccccCCc----------------------------------------cccCChHHHHHHHHHHHcCC
Confidence 35668999999999964221 11 347788999999998 5
Q ss_pred eEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC---------------cccccccC---C------------
Q 022266 170 DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLSC---L------------ 219 (300)
Q Consensus 170 evvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~---------------~~~KdL~~---L------------ 219 (300)
-+++||.|.+++|...++.++..++|..++.+.+-...... .++.|... |
T Consensus 160 vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~ 239 (297)
T PF05152_consen 160 VLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLR 239 (297)
T ss_pred EEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHH
Confidence 89999999999999999999988999998887543221110 12223333 2
Q ss_pred --CCC-CCcEEEEEcCccccccCCCCCccccCCCCCCCCcH
Q 022266 220 --SKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN 257 (300)
Q Consensus 220 --~rd-l~~~ViVDDs~~~~~~~p~NgI~I~~f~~g~~~D~ 257 (300)
|-+ .+.+-+|||-+.+ ..+-+|-+.++..- .-.+|-
T Consensus 240 k~gvny~KtiTLVDDL~~N-n~~YD~FVnvkrcp-~P~~DW 278 (297)
T PF05152_consen 240 KKGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-VPVNDW 278 (297)
T ss_pred HcCCceeeeEEEeccCccc-CccceeEEEeccCC-CCchHH
Confidence 111 4566788888876 45777888888874 333443
No 61
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.89 E-value=3.1e-05 Score=69.24 Aligned_cols=93 Identities=14% Similarity=0.127 Sum_probs=62.7
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcC-CCcee--EEEecCCccccCC------------Cccccc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG-ENLFS--LRLYRPSTTSTEY------------REHVKD 215 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp-~~~f~--~~l~r~~c~~~~~------------~~~~Kd 215 (300)
+..+||+.+||+++.+. +.++|.|++...|++++++.+-+ ...+. ..+..+.....+. ....+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 46899999999999986 99999999999999999998721 22332 2222211110000 011234
Q ss_pred ccCCCCCCCcEEEEEcCccccccCCCCCc
Q 022266 216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGI 244 (300)
Q Consensus 216 L~~L~rdl~~~ViVDDs~~~~~~~p~NgI 244 (300)
++.++.+..++|+|.|+..-...-...|+
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~ 181 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADK 181 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCc
Confidence 44556677899999999987766555666
No 62
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.87 E-value=1.4e-05 Score=69.78 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=78.7
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~Vi 228 (300)
+...||+.++|++|++. |.++|.|++...+++.+++.++-.++|..++..++....+.. .|.+-++.+|.+++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 34789999999999997 999999999999999999999887889999888876544433 566677788999999999
Q ss_pred EEcCccccccCCCCCccc
Q 022266 229 VDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 229 VDDs~~~~~~~p~NgI~I 246 (300)
|+|++.-......+|+..
T Consensus 171 vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EeCCHHHHHHHHHCCCcE
Confidence 999997666666667654
No 63
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.85 E-value=1.7e-05 Score=69.59 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=62.5
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecC-Cc---cc--cCCCcccccccCCCCCCCc
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP-ST---TS--TEYREHVKDLSCLSKDLCR 225 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~-~c---~~--~~~~~~~KdL~~L~rdl~~ 225 (300)
+..+||+.++|+.+++.+.++|-|++...+++.+++.++...+|...+.-+ +. .. ........-++.++...++
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~ 146 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR 146 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence 346899999999999889999999999999999999998776665433221 10 00 0001111112223344578
Q ss_pred EEEEEcCccccccCCCCCccc
Q 022266 226 TLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 226 ~ViVDDs~~~~~~~p~NgI~I 246 (300)
+++|.|+..-......+|+.|
T Consensus 147 ~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 147 VIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred EEEEeCCHHHHHHHHhCCCCE
Confidence 999999998764444444444
No 64
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.85 E-value=1.7e-05 Score=70.04 Aligned_cols=96 Identities=11% Similarity=0.032 Sum_probs=79.9
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCC-CCCCCcEEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL-SKDLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L-~rdl~~~Vi 228 (300)
+..+||+.++|+++++.+.++|-|++...+++.+++.++-..+|+.+++.+++...+.+ .+.+-++.+ |.+++++|+
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 46899999999999988999999999999999999999888899999888776654443 566778888 989999999
Q ss_pred EEcCc-cccccCCCCCcccc
Q 022266 229 VDNNP-FSFLLQPLNGIPCI 247 (300)
Q Consensus 229 VDDs~-~~~~~~p~NgI~I~ 247 (300)
|+|++ ........+|+..-
T Consensus 176 igD~~~~di~~A~~~G~~~i 195 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTC 195 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEE
Confidence 99997 46655556666443
No 65
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.81 E-value=5.8e-05 Score=73.01 Aligned_cols=122 Identities=17% Similarity=0.151 Sum_probs=79.0
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ceE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yev 171 (300)
+++.|+||-||||+..... . |.. ...-.+...||+.++|++|.+. |.+
T Consensus 1 ~~k~l~lDrDgtl~~~~~~-~----------------y~~--------------~~~~~~~l~pGV~e~L~~Lk~~G~kL 49 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPT-D----------------FQV--------------DSLDKLAFEPGVIPALLKLQKAGYKL 49 (354)
T ss_pred CCcEEEEeCCCCccCCCCc-c----------------ccc--------------cCcccceECcCHHHHHHHHHhCCCeE
Confidence 4789999999999974210 0 100 0011256899999999999876 999
Q ss_pred EEEcCC----c-----------hhhHHHHHHHhcCCCceeEEEec-----CCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 172 ILFTAG----L-----------EGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 172 vI~Ta~----~-----------~~YA~~vl~~LDp~~~f~~~l~r-----~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
+|.|+. . ..++..+++.++. .|..++++ +.|...+.. .+..-++.++.+++++++|
T Consensus 50 ~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmI 127 (354)
T PRK05446 50 VMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVI 127 (354)
T ss_pred EEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 999994 2 3445555555544 25555544 344333332 2333344567789999999
Q ss_pred EcCccccccCCCCCcccc
Q 022266 230 DNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I~ 247 (300)
-|+..-......+|+..-
T Consensus 128 GDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 128 GDRETDVQLAENMGIKGI 145 (354)
T ss_pred cCCHHHHHHHHHCCCeEE
Confidence 999876666666776533
No 66
>PRK09449 dUMP phosphatase; Provisional
Probab=97.74 E-value=3e-05 Score=68.96 Aligned_cols=94 Identities=20% Similarity=0.221 Sum_probs=76.8
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCC-CCCcEEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI 228 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~r-dl~~~Vi 228 (300)
+...||+.++|++|++.+.++|.|++...+++..++.++..++|+.++..+++...+.. .+.+-++.+|. +.+++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 45789999999999988999999999999999999999888899999888877555443 56677888885 4588999
Q ss_pred EEcCcc-ccccCCCCCcc
Q 022266 229 VDNNPF-SFLLQPLNGIP 245 (300)
Q Consensus 229 VDDs~~-~~~~~p~NgI~ 245 (300)
|+|++. .......+|+.
T Consensus 174 vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 174 VGDNLHSDILGGINAGID 191 (224)
T ss_pred EcCCcHHHHHHHHHCCCc
Confidence 999984 55555556654
No 67
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.73 E-value=3.7e-05 Score=70.50 Aligned_cols=86 Identities=10% Similarity=0.126 Sum_probs=58.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCC----chhhHHHHHHHhcC--CCceeEEEecCCccccCCC--cccccccCCCCC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDG--ENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD 222 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~----~~~YA~~vl~~LDp--~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rd 222 (300)
....||+.+||+++.+. ++|++-|+. ...+++.+++.++. .++|..++..+.. .+.. ...++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~------- 183 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKK------- 183 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHh-------
Confidence 44666799999999765 999999994 46688888887776 6677666655542 1111 22222
Q ss_pred CCcEEEEEcCccccccCCCCCccc
Q 022266 223 LCRTLIVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 223 l~~~ViVDDs~~~~~~~p~NgI~I 246 (300)
..-+|+|-|+..-+......|+..
T Consensus 184 ~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 184 KNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred cCCeEEEcCCHHHHHHHHHcCCcE
Confidence 223899999988776666666643
No 68
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=97.72 E-value=3.7e-05 Score=74.91 Aligned_cols=146 Identities=29% Similarity=0.325 Sum_probs=97.3
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcc
Q 022266 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169 (300)
Q Consensus 90 ~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y 169 (300)
+..++..||.|+|.|.+|+.-....|... ++........+. + ...+.. ...++++.||++..|+...++.|
T Consensus 22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~-~~~~~~~~~~~~------~-~~~~~~-~~~~~~k~~~~l~~~~~~i~~~~ 92 (390)
T COG5190 22 RQDKKLILVVDLDQTIIHTTVDPNDPNNV-NQSLERTLKSVN------D-RDPVQE-KCAYYVKARPKLFPFLTKISPLY 92 (390)
T ss_pred hcCcccccccccccceecccccCCCCCch-hhhhhccccchh------c-cccccc-cccceeeecccccchhhhhchhc
Confidence 34577889999999999985432222211 122222211111 1 011111 23578999999999999999999
Q ss_pred eEEEEcCCchhhHHHHHHHhcCCC-ceeEE-EecCCccccCCCcccccccCC-CCCCCcEEEEEcCccccccC--CCCCc
Q 022266 170 DLILFTAGLEGYARPLVDRIDGEN-LFSLR-LYRPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQ--PLNGI 244 (300)
Q Consensus 170 evvI~Ta~~~~YA~~vl~~LDp~~-~f~~~-l~r~~c~~~~~~~~~KdL~~L-~rdl~~~ViVDDs~~~~~~~--p~NgI 244 (300)
++.++|.|+..||+.+.+++||.+ .|..+ ..++.- .+.-.|-++++ ..+...++++||.+..|.-+ -.|.+
T Consensus 93 e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~~----~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v 168 (390)
T COG5190 93 ELHIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDES----GSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFV 168 (390)
T ss_pred ceeeEeeccccchhhhhhccccccccccccccccccc----ccchhhhhhhcCccccccccccccccccCCccchhhhhh
Confidence 999999999999999999999986 45443 334321 23556777776 67889999999999998221 12455
Q ss_pred cccC
Q 022266 245 PCIP 248 (300)
Q Consensus 245 ~I~~ 248 (300)
...+
T Consensus 169 ~~~~ 172 (390)
T COG5190 169 AKSP 172 (390)
T ss_pred cccc
Confidence 5555
No 69
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.70 E-value=0.00015 Score=73.48 Aligned_cols=112 Identities=14% Similarity=0.038 Sum_probs=74.7
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ce
Q 022266 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD 170 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye 170 (300)
...+++.||+||||+........+.. ...+ ..+-||+.+.|+.|.+. |.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~-----------------------------~~d~-~~l~pgV~e~L~~L~~~Gy~ 215 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKG-----------------------------PDDW-QIIFPEIPEKLKELEADGFK 215 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCC-----------------------------HHHe-eecccCHHHHHHHHHHCCCE
Confidence 46789999999999964211111000 0011 22569999999999987 99
Q ss_pred EEEEcCCch------------hhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCC----CCCCCcEEEEEcC
Q 022266 171 LILFTAGLE------------GYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL----SKDLCRTLIVDNN 232 (300)
Q Consensus 171 vvI~Ta~~~------------~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L----~rdl~~~ViVDDs 232 (300)
|+|+|+... ..++.+++.++.. |...+..+.|.+.+.. ++..-++.+ +-+++++++|-|+
T Consensus 216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDa 293 (526)
T TIGR01663 216 ICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDA 293 (526)
T ss_pred EEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCc
Confidence 999999766 4688888888753 6655556665554432 332222333 4689999999999
Q ss_pred ccc
Q 022266 233 PFS 235 (300)
Q Consensus 233 ~~~ 235 (300)
..-
T Consensus 294 agr 296 (526)
T TIGR01663 294 AGR 296 (526)
T ss_pred ccc
Confidence 844
No 70
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.66 E-value=3.3e-05 Score=65.79 Aligned_cols=85 Identities=9% Similarity=0.066 Sum_probs=63.8
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVD 230 (300)
++.+|+. -|++|++. +.++|-|+.....++.+++.+....+|... ..+...+.+-++.+|-+.+++++|-
T Consensus 29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vG 99 (154)
T TIGR01670 29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ-------SNKLIAFSDILEKLALAPENVAYIG 99 (154)
T ss_pred EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc-------cchHHHHHHHHHHcCCCHHHEEEEC
Confidence 3577776 79999876 999999999999999999999877666421 1222244455566788899999999
Q ss_pred cCccccccCCCCCcc
Q 022266 231 NNPFSFLLQPLNGIP 245 (300)
Q Consensus 231 Ds~~~~~~~p~NgI~ 245 (300)
|+..-...-...|+.
T Consensus 100 Ds~~D~~~~~~ag~~ 114 (154)
T TIGR01670 100 DDLIDWPVMEKVGLS 114 (154)
T ss_pred CCHHHHHHHHHCCCe
Confidence 998877665556664
No 71
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.65 E-value=3.8e-05 Score=69.14 Aligned_cols=92 Identities=17% Similarity=0.162 Sum_probs=70.6
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--------CcccccccCCCCC-
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--------REHVKDLSCLSKD- 222 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--------~~~~KdL~~L~rd- 222 (300)
++.-|-|++||-.|.+.+ .++||+|.+..|..++++|+...+|..+.+.+.....+. ..|.|-.+..|-+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 456677899999998887 899999999999999999999999998887764321111 1344445555665
Q ss_pred CCcEEEEEcCccccccCCCCCc
Q 022266 223 LCRTLIVDNNPFSFLLQPLNGI 244 (300)
Q Consensus 223 l~~~ViVDDs~~~~~~~p~NgI 244 (300)
++||+++|||..+......=|+
T Consensus 178 p~~t~FfDDS~~NI~~ak~vGl 199 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKEVGL 199 (244)
T ss_pred cCceEEEcCchhhHHHHHhccc
Confidence 9999999999998776555543
No 72
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.64 E-value=3.8e-05 Score=67.48 Aligned_cols=99 Identities=11% Similarity=0.030 Sum_probs=79.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh-cCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L-Dp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~V 227 (300)
...+||+.++|+.+++. +.++|.|++....+..++... ....+|+.+++.+++...|.. .|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 45799999999999876 999999999988776655442 334578888888877665544 56677888999999999
Q ss_pred EEEcCccccccCCCCCccccCCC
Q 022266 228 IVDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 228 iVDDs~~~~~~~p~NgI~I~~f~ 250 (300)
+|||++.....-...|+..--+.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVT 185 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEec
Confidence 99999988877778898877664
No 73
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.62 E-value=5.7e-05 Score=67.46 Aligned_cols=84 Identities=15% Similarity=0.229 Sum_probs=58.2
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCC--ccc-----cCC--CcccccccCCCCC
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS--TTS-----TEY--REHVKDLSCLSKD 222 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~--c~~-----~~~--~~~~KdL~~L~rd 222 (300)
+..+||+.+||+++.+.+.++|-|++...+++++++.++-..+|..++--++ ... .+. ...++-++..+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~-- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY-- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC--
Confidence 3589999999999998889999999999999999999988777764333222 100 000 12233333333
Q ss_pred CCcEEEEEcCcccccc
Q 022266 223 LCRTLIVDNNPFSFLL 238 (300)
Q Consensus 223 l~~~ViVDDs~~~~~~ 238 (300)
.+++.|-|+..-...
T Consensus 145 -~~~v~vGDs~nDl~m 159 (203)
T TIGR02137 145 -YRVIAAGDSYNDTTM 159 (203)
T ss_pred -CCEEEEeCCHHHHHH
Confidence 379999998875544
No 74
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.60 E-value=6.5e-05 Score=68.41 Aligned_cols=98 Identities=10% Similarity=-0.007 Sum_probs=80.4
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCce-eEEEecCCccccCCC--cccccccCCCC-CCCcE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT 226 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f-~~~l~r~~c~~~~~~--~~~KdL~~L~r-dl~~~ 226 (300)
+...||+.++|++|++. +.++|-|++...+++.+++.++..++| ..++..++....+.. .+.+-++.+|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 35789999999999886 999999999999999999999888885 777777765444433 56777888887 48999
Q ss_pred EEEEcCccccccCCCCCccccCC
Q 022266 227 LIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 227 ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|.|++.-...-..+|+.+--.
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998887777788765544
No 75
>PLN02954 phosphoserine phosphatase
Probab=97.57 E-value=0.00015 Score=64.49 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=60.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC--CceeEEEe-cCC------------ccccCCCccc-c
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLY-RPS------------TTSTEYREHV-K 214 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~--~~f~~~l~-r~~------------c~~~~~~~~~-K 214 (300)
...+||+.++|+.+.+. +.++|-|++...+++.+++.++-. .+|...+. .++ |........+ +
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 34789999999999886 899999999999999999998764 45643222 110 1100001111 1
Q ss_pred cccCCCCCCCcEEEEEcCccccccCCCCCcc
Q 022266 215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 215 dL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~ 245 (300)
-++.++ .+++|+|-|+..-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 112233 36899999999988774444444
No 76
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.47 E-value=0.00018 Score=63.71 Aligned_cols=93 Identities=16% Similarity=0.069 Sum_probs=78.8
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
+..-|++.++|+.+.+.|.++|.|+|...++...++.+....+|+.+++.+.....|.. .|..-++.+|-+++++++|
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~V 177 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFV 177 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEE
Confidence 56789999999999988999999999999999999999988899999999988755543 6777888899999999999
Q ss_pred EcCcccc-ccCCCCCc
Q 022266 230 DNNPFSF-LLQPLNGI 244 (300)
Q Consensus 230 DDs~~~~-~~~p~NgI 244 (300)
||+...- .....-|+
T Consensus 178 gD~~~~di~gA~~~G~ 193 (229)
T COG1011 178 GDSLENDILGARALGM 193 (229)
T ss_pred CCChhhhhHHHHhcCc
Confidence 9999876 33333344
No 77
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.40 E-value=0.00017 Score=68.91 Aligned_cols=96 Identities=15% Similarity=0.235 Sum_probs=66.8
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEe-------cC---CccccCCC-ccc-ccccC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY-------RP---STTSTEYR-EHV-KDLSC 218 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~-------r~---~c~~~~~~-~~~-KdL~~ 218 (300)
+..+||+.++|+.|.+. +.++|.|++...+++.+.+.++-...+...+- .. .+...+.+ ..+ +=++.
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~ 259 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQE 259 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHH
Confidence 45899999999999987 99999999999999999999876544332211 10 11111111 222 33356
Q ss_pred CCCCCCcEEEEEcCccccccCCCCCcccc
Q 022266 219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (300)
Q Consensus 219 L~rdl~~~ViVDDs~~~~~~~p~NgI~I~ 247 (300)
+|.++++||.|-|+..-..+-...|+.|-
T Consensus 260 lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 260 YEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred cCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 78899999999999987766555566554
No 78
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.37 E-value=0.00013 Score=66.02 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=72.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh---cCCCceeEEEecCCccccCCCcccccccCCCCCCCcEE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI---DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L---Dp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~V 227 (300)
....||+.++|+++.+. +.++|+|+++....+.+++.. +...+|+..+....+...+...|.+-++.+|.++++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l 173 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL 173 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence 34889999999999876 999999999999999988876 33445655443322222222367788888999999999
Q ss_pred EEEcCccccccCCCCCccc
Q 022266 228 IVDNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 228 iVDDs~~~~~~~p~NgI~I 246 (300)
+|+|+..........|+..
T Consensus 174 fVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 174 FLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEeCCHHHHHHHHHcCCEE
Confidence 9999998776666677654
No 79
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.35 E-value=0.00021 Score=62.53 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=70.9
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
..-||+.++|++|++. +.++|.|++... +..+++.++-.++|..++..+++...+.. .+.+-++.+|.+++++|+|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 4679999999999986 999999998875 47888888877889888887776554433 4667778889999999999
Q ss_pred EcCc-cccccCCCCCc
Q 022266 230 DNNP-FSFLLQPLNGI 244 (300)
Q Consensus 230 DDs~-~~~~~~p~NgI 244 (300)
+|++ .-.......|+
T Consensus 184 gD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 184 GDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCchHHHHHHHHcCC
Confidence 9997 34443344444
No 80
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.34 E-value=0.00015 Score=62.12 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=71.9
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccCCCCCCCcEEEE
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~ViV 229 (300)
...||+.++|++|++. +.++|-|++. .+..+++.++...+|+.++..++-...+. ..+.+-++.++.+++++|+|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 4689999999999876 9999999864 46788999888888988887665433332 25667788888899999999
Q ss_pred EcCccccccCCCCCccc
Q 022266 230 DNNPFSFLLQPLNGIPC 246 (300)
Q Consensus 230 DDs~~~~~~~p~NgI~I 246 (300)
+|++.-...-..+|+..
T Consensus 165 gD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMFA 181 (185)
T ss_pred ecCHHHHHHHHHcCCEE
Confidence 99988776666666643
No 81
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.30 E-value=0.00037 Score=64.18 Aligned_cols=98 Identities=11% Similarity=-0.016 Sum_probs=78.5
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCce-eEEEecCCccccCCC--cccccccCCCCC-CCcE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRT 226 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f-~~~l~r~~c~~~~~~--~~~KdL~~L~rd-l~~~ 226 (300)
+..-||+.++|+.|++. +.++|-|++....++.+++.+...++| ..+++.+++...+.. .+.+-++.+|-+ ++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 35689999999999876 999999999999999999988777764 777777765544433 567778888875 6899
Q ss_pred EEEEcCccccccCCCCCccccCC
Q 022266 227 LIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 227 ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|+|++.-.......|+..--.
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998887777778765543
No 82
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.28 E-value=0.0012 Score=56.74 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=43.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCc-------hhhH-------HHHHHHhcCCCceeEEEec---CCccccCCCccc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGL-------EGYA-------RPLVDRIDGENLFSLRLYR---PSTTSTEYREHV 213 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~-------~~YA-------~~vl~~LDp~~~f~~~l~r---~~c~~~~~~~~~ 213 (300)
...-|++.+-|+++.+. |.|||+|+.. ..-. +.+++.++-. + .+++. +.|.....+++.
T Consensus 28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSSTTSTTSSHHHH
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCCCCCCCchhHHH
Confidence 34678999999999986 9999999852 1222 2333333221 2 22222 233322233443
Q ss_pred ccccCCC----CCCCcEEEEEcCccc
Q 022266 214 KDLSCLS----KDLCRTLIVDNNPFS 235 (300)
Q Consensus 214 KdL~~L~----rdl~~~ViVDDs~~~ 235 (300)
.-++.++ -|+++.++|=|+...
T Consensus 105 ~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 105 FALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp HHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred HHHHhccccccccccceEEEeccCCC
Confidence 3333333 488999999997654
No 83
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.26 E-value=0.00063 Score=59.56 Aligned_cols=81 Identities=12% Similarity=0.165 Sum_probs=67.6
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD 230 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViVD 230 (300)
..|+..++|+.|++. +.++|.|++...+++.+++.++-..+|..+++.++... +.. .+.+-++.+|.+++++|+|+
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence 455669999999976 99999999999999999999998889998888776543 332 45667778898999999999
Q ss_pred cCccc
Q 022266 231 NNPFS 235 (300)
Q Consensus 231 Ds~~~ 235 (300)
|++.-
T Consensus 186 D~~~D 190 (197)
T TIGR01548 186 DTVDD 190 (197)
T ss_pred CCHHH
Confidence 99853
No 84
>PRK08238 hypothetical protein; Validated
Probab=97.21 E-value=0.00097 Score=67.10 Aligned_cols=49 Identities=18% Similarity=0.148 Sum_probs=42.1
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST 204 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c 204 (300)
..+||+.++|+++++. +.++|-|++.+.+++++++.++- |+.++..+..
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~ 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGT 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCc
Confidence 3789999999999876 99999999999999999999864 7777766543
No 85
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.19 E-value=0.00036 Score=65.38 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=75.1
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc---eeEEEecCCccccCCC--cccccccCCCCCCCc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL---FSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR 225 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~---f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~ 225 (300)
+...||+.++|++|++. +.++|.|++...++..+++.+.-.++ |..+ ..+.+...+.. .+.+-++.+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 46899999999999986 99999999999999999997742233 3333 55555433333 566777888999999
Q ss_pred EEEEEcCccccccCCCCCccccCCC
Q 022266 226 TLIVDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 226 ~ViVDDs~~~~~~~p~NgI~I~~f~ 250 (300)
+|+|+|++.-+..-..+|+.+--..
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 9999999998877777887665443
No 86
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.16 E-value=0.00088 Score=60.88 Aligned_cols=78 Identities=5% Similarity=-0.007 Sum_probs=54.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHH--HHHHHhcCCC-ceeEEEecCCccccCCCcccccccCCCCCCCcEEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR--PLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~--~vl~~LDp~~-~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViV 229 (300)
.-||+.|+|++|.+. +.++|.|++.+..++ ..++.++... .|..++....... .....-++.++.+.+++++|
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~v 101 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV---QMILESKKRFDIRNGIIYLL 101 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH---HHHHhhhhhccCCCceEEEe
Confidence 469999999999986 999999999988776 7788888776 7777776654321 11111223345555667777
Q ss_pred EcCcc
Q 022266 230 DNNPF 234 (300)
Q Consensus 230 DDs~~ 234 (300)
-|+..
T Consensus 102 Gd~~~ 106 (242)
T TIGR01459 102 GHLEN 106 (242)
T ss_pred CCccc
Confidence 77553
No 87
>PLN02811 hydrolase
Probab=97.05 E-value=0.00053 Score=61.26 Aligned_cols=97 Identities=9% Similarity=0.038 Sum_probs=72.1
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHH-HHHhcCCCceeEEEecC--CccccCCC--cccccccCCC---CCC
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPL-VDRIDGENLFSLRLYRP--STTSTEYR--EHVKDLSCLS---KDL 223 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~v-l~~LDp~~~f~~~l~r~--~c~~~~~~--~~~KdL~~L~---rdl 223 (300)
...||+.++|+.|++. +.++|-|++.+.++... .+......+|..+++.+ ++...+.. .|.+-++.++ .++
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 4679999999999986 99999999988766543 33233446788888888 65443332 5666666665 889
Q ss_pred CcEEEEEcCccccccCCCCCccccCC
Q 022266 224 CRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 224 ~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
+++|+|+|+..-+.....+|+.+--.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEEE
Confidence 99999999999887777778766544
No 88
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.00 E-value=0.0022 Score=59.88 Aligned_cols=79 Identities=11% Similarity=0.130 Sum_probs=48.5
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC---C-ceeEEEecCCccccCCCcccccccCCCCCCCcEE
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE---N-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~---~-~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~V 227 (300)
..-||+.+||+++.+. ..+++.|+....+.+...+.+... . .+.+++.+++- ..+. .-.+-+.. +.+. ++
T Consensus 118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~~K~-~rr~~I~~-~y~I--vl 192 (266)
T TIGR01533 118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-SSKE-SRRQKVQK-DYEI--VL 192 (266)
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-CCcH-HHHHHHHh-cCCE--EE
Confidence 3679999999999877 899999998877776555554333 2 24677777542 2111 11111110 2222 78
Q ss_pred EEEcCcccc
Q 022266 228 IVDNNPFSF 236 (300)
Q Consensus 228 iVDDs~~~~ 236 (300)
+|.|+..-+
T Consensus 193 ~vGD~~~Df 201 (266)
T TIGR01533 193 LFGDNLLDF 201 (266)
T ss_pred EECCCHHHh
Confidence 888887655
No 89
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.89 E-value=0.00053 Score=60.01 Aligned_cols=78 Identities=9% Similarity=0.100 Sum_probs=55.6
Q ss_pred HHHhhh-cceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCC
Q 022266 162 LKQLSE-FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP 240 (300)
Q Consensus 162 L~~l~~-~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p 240 (300)
++.+.+ .++++|-|+.....+..+++.+....+|. .+ ..+...+.+-++.+|.+.+++++|-|+..-...-.
T Consensus 57 i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~------g~-~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~ 129 (183)
T PRK09484 57 IRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ------GQ-SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVME 129 (183)
T ss_pred HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec------CC-CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 344444 59999999999999999999988666553 11 11222445556777889999999999988766555
Q ss_pred CCCccc
Q 022266 241 LNGIPC 246 (300)
Q Consensus 241 ~NgI~I 246 (300)
..|+.+
T Consensus 130 ~aG~~~ 135 (183)
T PRK09484 130 KVGLSV 135 (183)
T ss_pred HCCCeE
Confidence 556654
No 90
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=96.81 E-value=0.00033 Score=59.79 Aligned_cols=78 Identities=8% Similarity=0.003 Sum_probs=65.2
Q ss_pred EEeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEE
Q 022266 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViV 229 (300)
+...||+.++|+. ++|.|++...+++.+++++....+|+.+++.+.+...|.. .|.+-++++|.+++++++|
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 4489999999993 7899999999999999999888889888887765544433 5677888899999999999
Q ss_pred EcCccc
Q 022266 230 DNNPFS 235 (300)
Q Consensus 230 DDs~~~ 235 (300)
+|++..
T Consensus 163 gD~~~D 168 (175)
T TIGR01493 163 AAHQWD 168 (175)
T ss_pred ecChhh
Confidence 999743
No 91
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.79 E-value=0.003 Score=56.88 Aligned_cols=87 Identities=15% Similarity=0.205 Sum_probs=63.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC-----------Cccc-ccccC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY-----------REHV-KDLSC 218 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~-----------~~~~-KdL~~ 218 (300)
..++||+.+.++++++. +.++|.|+|-..+++++.+.+..+..+..++-.++-..+.. ..-. .=++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 66899999999999998 99999999999999999999998776666555443101110 0111 22234
Q ss_pred CCCCCCcEEEEEcCcccccc
Q 022266 219 LSKDLCRTLIVDNNPFSFLL 238 (300)
Q Consensus 219 L~rdl~~~ViVDDs~~~~~~ 238 (300)
+|.++++++.+-|+..-..+
T Consensus 156 ~g~~~~~~~a~gDs~nDlpm 175 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPM 175 (212)
T ss_pred cCCCHHHeEEEcCchhhHHH
Confidence 57888899999988876544
No 92
>PTZ00445 p36-lilke protein; Provisional
Probab=96.63 E-value=0.002 Score=58.03 Aligned_cols=133 Identities=10% Similarity=0.044 Sum_probs=81.1
Q ss_pred cccCCceEEEEeCCCcccc--cccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhh
Q 022266 89 EERLQKLTVVLDLDETLVC--AYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLS 166 (300)
Q Consensus 89 ~~~~~k~tLVLDLDeTLV~--s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~ 166 (300)
.+..+-+.|++|||.|||. |..-. -| ..++ ..+--..||.+.++++.|.
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~-~~------------------------~~~~----~~~~~~~tpefk~~~~~l~ 88 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYI-DP------------------------DNDD----IRVLTSVTPDFKILGKRLK 88 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhccccc-CC------------------------Ccch----hhhhccCCHHHHHHHHHHH
Confidence 3456889999999999994 32100 00 0000 0122348999999999999
Q ss_pred hc-ceEEEEcCCchhh---------------HHHHHHHhcCCCceeEE------EecCC-------ccccCCCc--c--c
Q 022266 167 EF-ADLILFTAGLEGY---------------ARPLVDRIDGENLFSLR------LYRPS-------TTSTEYRE--H--V 213 (300)
Q Consensus 167 ~~-yevvI~Ta~~~~Y---------------A~~vl~~LDp~~~f~~~------l~r~~-------c~~~~~~~--~--~ 213 (300)
+. +.|+|-|-+.+.- ++..++.=.-+-.+..+ ++.+. +....... | .
T Consensus 89 ~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle 168 (219)
T PTZ00445 89 NSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLK 168 (219)
T ss_pred HCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHH
Confidence 75 9999999888754 33333321111111111 11111 11111111 3 4
Q ss_pred ccccCCCCCCCcEEEEEcCccccccCCCCCccccCCC
Q 022266 214 KDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 214 KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f~ 250 (300)
+-++..|.+++.+++|||++.+......-|+..--|.
T Consensus 169 ~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 169 QVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred HHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 4556678999999999999999887777888777775
No 93
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.56 E-value=0.006 Score=48.45 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=28.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
.=||+.|||++|.+. ..+++.|+++..-.+.++++|.
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~ 52 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLK 52 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHH
Confidence 349999999999987 9999999998666666666653
No 94
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.54 E-value=0.0085 Score=49.80 Aligned_cols=49 Identities=6% Similarity=0.012 Sum_probs=35.5
Q ss_pred eCccHHHHHHHhhh-cceEEEEcCCchhhHH------------HHHHHhcCCCc-eeEEEecC
Q 022266 154 ERPGLREFLKQLSE-FADLILFTAGLEGYAR------------PLVDRIDGENL-FSLRLYRP 202 (300)
Q Consensus 154 ~RPgl~eFL~~l~~-~yevvI~Ta~~~~YA~------------~vl~~LDp~~~-f~~~l~r~ 202 (300)
..+.+.+.|+++.+ -+++++.|+-...... .+.+-|+.++. +..++.+.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence 67888899999865 4999999998887766 66666666553 44554443
No 95
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.53 E-value=0.0045 Score=53.79 Aligned_cols=114 Identities=20% Similarity=0.213 Sum_probs=81.1
Q ss_pred cccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc
Q 022266 89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF 168 (300)
Q Consensus 89 ~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ 168 (300)
....+.+.+|+|||+|||-=. .. ..=|-+.+-+..+++.
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd--~~---------------------------------------~~tpe~~~W~~e~k~~ 61 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD--NP---------------------------------------DATPELRAWLAELKEA 61 (175)
T ss_pred HHHcCCcEEEEeccCceeccc--CC---------------------------------------CCCHHHHHHHHHHHhc
Confidence 345688999999999999421 00 1346778889999987
Q ss_pred -ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCcccc-ccCCCCC---
Q 022266 169 -ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF-LLQPLNG--- 243 (300)
Q Consensus 169 -yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~-~~~p~Ng--- 243 (300)
-.++|.|++++.-+..+++.+|-..+... .-.+ ...+.|-|..++-+.++|++|-|.-..= .....+|
T Consensus 62 gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A-----~KP~--~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~t 134 (175)
T COG2179 62 GIKVVVVSNNKESRVARAAEKLGVPFIYRA-----KKPF--GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRT 134 (175)
T ss_pred CCEEEEEeCCCHHHHHhhhhhcCCceeecc-----cCcc--HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEE
Confidence 89999999999999999999987543221 1111 1256778888999999999999987532 1222333
Q ss_pred ccccCCC
Q 022266 244 IPCIPFS 250 (300)
Q Consensus 244 I~I~~f~ 250 (300)
|.|.|=.
T Consensus 135 IlV~Pl~ 141 (175)
T COG2179 135 ILVEPLV 141 (175)
T ss_pred EEEEEec
Confidence 5667764
No 96
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.50 E-value=0.0071 Score=53.31 Aligned_cols=85 Identities=16% Similarity=0.184 Sum_probs=58.7
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCC----chhhHH--------HHHHHhcCCC-ceeEEEecCC-----ccccCC--Cc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAG----LEGYAR--------PLVDRIDGEN-LFSLRLYRPS-----TTSTEY--RE 211 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~----~~~YA~--------~vl~~LDp~~-~f~~~l~r~~-----c~~~~~--~~ 211 (300)
...||+.+=|..+.+. |.+||+|+. ...|.. .+++.+--.+ .|+.+++|.| |.+.+. +.
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm 110 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGM 110 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHH
Confidence 3789999999999886 999999993 233333 3444443333 5888888754 444333 34
Q ss_pred ccccccCCCCCCCcEEEEEcCccccc
Q 022266 212 HVKDLSCLSKDLCRTLIVDNNPFSFL 237 (300)
Q Consensus 212 ~~KdL~~L~rdl~~~ViVDDs~~~~~ 237 (300)
+..-++..+.|+++.++|=|+..-..
T Consensus 111 ~~~~~~~~~iD~~~s~~VGD~~~Dlq 136 (181)
T COG0241 111 LLSALKEYNIDLSRSYVVGDRLTDLQ 136 (181)
T ss_pred HHHHHHHhCCCccceEEecCcHHHHH
Confidence 55556666789999999999965443
No 97
>PRK11590 hypothetical protein; Provisional
Probab=96.44 E-value=0.0069 Score=53.94 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=34.2
Q ss_pred EEeCccHHHHH-HHhhh-cceEEEEcCCchhhHHHHHHHhc
Q 022266 152 VFERPGLREFL-KQLSE-FADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 152 v~~RPgl~eFL-~~l~~-~yevvI~Ta~~~~YA~~vl~~LD 190 (300)
+..+||+.+.| +.+++ .+.++|-|++...|++++++.+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 34689999999 56775 59999999999999999999876
No 98
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.32 E-value=0.00047 Score=62.62 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=75.1
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc-CCCceeEEEe--cCCccccC--CCcccccccCCCCCC-C
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID-GENLFSLRLY--RPSTTSTE--YREHVKDLSCLSKDL-C 224 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD-p~~~f~~~l~--r~~c~~~~--~~~~~KdL~~L~rdl-~ 224 (300)
...-||+..++.+|..+ -.+.++|++.+.+++..++.+. .-+.|.+... -+.+...+ ...|.+-.+.+|.++ +
T Consensus 91 ~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~ 170 (222)
T KOG2914|consen 91 SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS 170 (222)
T ss_pred cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence 45889999999999987 8999999999999999888875 5566766555 33332222 236788888999888 9
Q ss_pred cEEEEEcCccccccCCCCCccccCC
Q 022266 225 RTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 225 ~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
++++++|++.....-..-|.++.-.
T Consensus 171 k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 171 KCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred ceEEECCCHHHHHHHHhcCCeEEEe
Confidence 9999999999887666655555444
No 99
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=96.31 E-value=0.0027 Score=57.53 Aligned_cols=89 Identities=15% Similarity=0.024 Sum_probs=66.7
Q ss_pred EeCccHHHHHHHhhhcceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCC--cccccccCCCCCCCcEEEEE
Q 022266 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD 230 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~--~~~KdL~~L~rdl~~~ViVD 230 (300)
..-||+.++|+.|++.|.++|.|++... ++..+..++|+.++..+.....+.. .+.+-++.+|.+++++|+|.
T Consensus 113 ~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VG 187 (238)
T PRK10748 113 DVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHVG 187 (238)
T ss_pred CCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEEc
Confidence 3559999999999988999999998765 3556666788888877655433332 56666778899999999999
Q ss_pred cCc-cccccCCCCCccc
Q 022266 231 NNP-FSFLLQPLNGIPC 246 (300)
Q Consensus 231 Ds~-~~~~~~p~NgI~I 246 (300)
|++ .-......+|+..
T Consensus 188 D~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 188 DDLTTDVAGAIRCGMQA 204 (238)
T ss_pred CCcHHHHHHHHHCCCeE
Confidence 995 5555555566654
No 100
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.16 E-value=0.012 Score=54.24 Aligned_cols=39 Identities=21% Similarity=0.107 Sum_probs=33.2
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
.|...+.|+.+.+. ..++|-|.-....+..+++.++...
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 35677899999987 8999999999999999999987554
No 101
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.09 E-value=0.013 Score=55.01 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=58.8
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC----CceeEEEe-c-CCccccCCCc----ccc------
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE----NLFSLRLY-R-PSTTSTEYRE----HVK------ 214 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~----~~f~~~l~-r-~~c~~~~~~~----~~K------ 214 (300)
+..|||+.+|+++|.+. ..++|+|+|...+++.+++.++-. ..++.++- . +.+.....+. +.|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 66999999999999887 999999999999999999986542 23343332 2 2221111111 112
Q ss_pred -cccCCC--CCCCcEEEEEcCccccc
Q 022266 215 -DLSCLS--KDLCRTLIVDNNPFSFL 237 (300)
Q Consensus 215 -dL~~L~--rdl~~~ViVDDs~~~~~ 237 (300)
..+.++ .+.++||+|.|+..-..
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ 225 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLR 225 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhh
Confidence 222334 67889999999998654
No 102
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.06 E-value=0.011 Score=59.03 Aligned_cols=132 Identities=20% Similarity=0.194 Sum_probs=77.9
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ce
Q 022266 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD 170 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye 170 (300)
..|+.||||||+||+-..- -+.|++...+- ...+|... --+.+|...+.+. .=
T Consensus 220 ~~kK~LVLDLDNTLWGGVI------------GedGv~GI~Ls-----~~~~G~~f---------k~fQ~~Ik~l~kqGVl 273 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVI------------GEDGVDGIRLS-----NSAEGEAF---------KTFQNFIKGLKKQGVL 273 (574)
T ss_pred cccceEEEecCCccccccc------------ccccccceeec-----CCCCchhH---------HHHHHHHHHHHhccEE
Confidence 4799999999999996421 11222212111 11222211 0245677777765 77
Q ss_pred EEEEcCCchhhHHHHHHHhcCCCcee-EEEecCCcccc-CCCcccccccCCCCCCCcEEEEEcCccccccCCCCC-cccc
Q 022266 171 LILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTST-EYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNG-IPCI 247 (300)
Q Consensus 171 vvI~Ta~~~~YA~~vl~~LDp~~~f~-~~l~r~~c~~~-~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~Ng-I~I~ 247 (300)
++|-|-.+..-|+.+..+- |+=.+. --+..-.|... +.....|-.++||-.++..|+|||+|.....-..++ +.|.
T Consensus 274 Lav~SKN~~~da~evF~kh-p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi 352 (574)
T COG3882 274 LAVCSKNTEKDAKEVFRKH-PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVI 352 (574)
T ss_pred EEEecCCchhhHHHHHhhC-CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeec
Confidence 8899999888888887752 221111 01111223222 222456777889999999999999998765433343 6677
Q ss_pred CCC
Q 022266 248 PFS 250 (300)
Q Consensus 248 ~f~ 250 (300)
+|-
T Consensus 353 ~~~ 355 (574)
T COG3882 353 EFP 355 (574)
T ss_pred cCC
Confidence 774
No 103
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.95 E-value=0.023 Score=49.48 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=61.7
Q ss_pred cccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc
Q 022266 89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF 168 (300)
Q Consensus 89 ~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ 168 (300)
.+..+-+.||||+|+||+.-... ..-|-+.+.+++|.+.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~-----------------------------------------~i~~~~~~~~~~l~~~ 74 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYED-----------------------------------------EIPPEYAEWLNELKKQ 74 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcC-----------------------------------------cCCHHHHHHHHHHHHH
Confidence 44568899999999999953211 1456677889999987
Q ss_pred c-e--EEEEcCCc-------hhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCC-----CCCCCcEEEEEcCc
Q 022266 169 A-D--LILFTAGL-------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL-----SKDLCRTLIVDNNP 233 (300)
Q Consensus 169 y-e--vvI~Ta~~-------~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L-----~rdl~~~ViVDDs~ 233 (300)
| + |+|.|++. ..-|+.+-+.+... .+.+. +. +.+.+.+-++.+ ...++++++|.|.-
T Consensus 75 ~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl~h~-----~k--KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl 146 (168)
T PF09419_consen 75 FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VLRHR-----AK--KPGCFREILKYFKCQKVVTSPSEIAVIGDRL 146 (168)
T ss_pred CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EEEeC-----CC--CCccHHHHHHHHhhccCCCCchhEEEEcchH
Confidence 5 3 99999984 66677777777632 22222 11 122211222222 23588999999986
Q ss_pred c
Q 022266 234 F 234 (300)
Q Consensus 234 ~ 234 (300)
.
T Consensus 147 ~ 147 (168)
T PF09419_consen 147 F 147 (168)
T ss_pred H
Confidence 4
No 104
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.84 E-value=0.023 Score=51.88 Aligned_cols=59 Identities=22% Similarity=0.237 Sum_probs=48.4
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ceE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yev 171 (300)
..+.+++||||||+.+.+. ..|...+.|+++.+. ..+
T Consensus 2 ~~kli~~DlDGTLl~~~~~------------------------------------------i~~~~~~al~~~~~~g~~v 39 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKT------------------------------------------ISPETKEALARLREKGVKV 39 (264)
T ss_pred CeeEEEEcCCCCccCCCCc------------------------------------------cCHHHHHHHHHHHHCCCEE
Confidence 4688999999999975321 456677888888665 999
Q ss_pred EEEcCCchhhHHHHHHHhcCCC
Q 022266 172 ILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 172 vI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
+|-|......+.++++.|....
T Consensus 40 ~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 40 VLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred EEECCCChHHHHHHHHHcCCCc
Confidence 9999999999999999998775
No 105
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.62 E-value=0.031 Score=49.47 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=31.7
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
-|...+-|+++.+. ..+++-|.-....+..+.+.++...
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 45566778888876 8999999999998999998887764
No 106
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.45 E-value=0.051 Score=49.61 Aligned_cols=36 Identities=8% Similarity=0.097 Sum_probs=28.8
Q ss_pred cHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 157 gl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
...+-|+++.+. ..++|-|.-....+..+++.+...
T Consensus 24 ~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 24 AVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred HHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 345778888877 889999998888888898888754
No 107
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.44 E-value=0.014 Score=50.86 Aligned_cols=118 Identities=13% Similarity=0.058 Sum_probs=77.5
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhh-hcceE
Q 022266 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLS-EFADL 171 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~-~~yev 171 (300)
.-+++|||.||+|-+-.-. ...+|... .-+..|-|.-- +.|. ..+.+
T Consensus 6 ~i~~~v~d~dGv~tdg~~~---------------------------~~~~g~~~---~~~~~~D~~~~--~~L~~~Gi~l 53 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIV---------------------------INDEGIES---RNFDIKDGMGV--IVLQLCGIDV 53 (169)
T ss_pred cCeEEEEeCceeeECCeEE---------------------------EcCCCcEE---EEEecchHHHH--HHHHHCCCEE
Confidence 3678999999999974110 01122221 11335555432 2333 35999
Q ss_pred EEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcCccccccCCCCCccccCC
Q 022266 172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 172 vI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
.|.|+....+++.+++.+.-..+|... ..+...+.+-++.++-+.++++.|.|+..-...-...|+.+..=
T Consensus 54 aIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 54 AIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred EEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 999999999999999999887776532 11222455556667888899999999987766555566655544
No 108
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.41 E-value=0.036 Score=48.80 Aligned_cols=37 Identities=24% Similarity=0.268 Sum_probs=28.2
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
|...+.|+.+.+. ..+++.|.-....+..+++.+.-.
T Consensus 18 ~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 18 PETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred HHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 4456777877755 888888888888888888876543
No 109
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=95.39 E-value=0.039 Score=49.09 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=59.6
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCce-e--EEEecCCccccCCC--c----------cccc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-S--LRLYRPSTTSTEYR--E----------HVKD 215 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f-~--~~l~r~~c~~~~~~--~----------~~Kd 215 (300)
+..|||+.+||+.+.+. ..++|.|++...+++++++.+.....+ . ..+..+........ . -.+-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 56999999999999986 999999999999999999998543332 2 12211111000000 0 0122
Q ss_pred ccCCCCCCCcEEEEEcCccccccCCCCCc
Q 022266 216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGI 244 (300)
Q Consensus 216 L~~L~rdl~~~ViVDDs~~~~~~~p~NgI 244 (300)
++.++...+++|.|-|+..-+..-...++
T Consensus 149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 33334456789999999887655444444
No 110
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.32 E-value=0.048 Score=48.44 Aligned_cols=39 Identities=18% Similarity=0.202 Sum_probs=28.2
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
.|...+-|+++.+. ..++|-|.-....+..+++.+....
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 34455667777765 7888888888888888888876553
No 111
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.25 E-value=0.064 Score=49.20 Aligned_cols=53 Identities=21% Similarity=0.345 Sum_probs=44.6
Q ss_pred EEeCccHHHHHHHhhh---cceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCc
Q 022266 152 VFERPGLREFLKQLSE---FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPST 204 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~---~yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c 204 (300)
+..-||+.+|++.+++ .++++|-|.|..-|.+.++++-+....|+.+++-..+
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~ 125 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPAC 125 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCce
Confidence 4478999999999954 5999999999999999999998887777776655544
No 112
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.21 E-value=0.046 Score=49.40 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
|...++|+++.+. ..+++.|.-+...+..+++.++..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3467899999987 899999998888888888888753
No 113
>PRK10444 UMP phosphatase; Provisional
Probab=95.18 E-value=0.044 Score=50.38 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=28.0
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
=||+.++|+.+.+. ..+++.|+....-.+.+++++.
T Consensus 19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 47888888888875 8888888888777777777764
No 114
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.10 E-value=0.061 Score=48.94 Aligned_cols=15 Identities=40% Similarity=0.525 Sum_probs=13.2
Q ss_pred ceEEEEeCCCccccc
Q 022266 94 KLTVVLDLDETLVCA 108 (300)
Q Consensus 94 k~tLVLDLDeTLV~s 108 (300)
.+++++||||||+.+
T Consensus 3 ~kli~~DlDGTLl~~ 17 (272)
T PRK10530 3 YRVIALDLDGTLLTP 17 (272)
T ss_pred ccEEEEeCCCceECC
Confidence 478999999999975
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.03 E-value=0.054 Score=47.99 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=30.6
Q ss_pred HHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 158 l~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
..+.|+.+.+. ..+++.|......+..+++.+...
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 56888888876 899999999999999999998754
No 116
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.01 E-value=0.054 Score=49.20 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=28.4
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
|...+.|+++.+. ..++|-|......+..+++.+...
T Consensus 19 ~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 19 PSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4456777888776 888888888888888888887655
No 117
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=94.99 E-value=0.041 Score=46.61 Aligned_cols=49 Identities=29% Similarity=0.575 Sum_probs=41.7
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEe
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY 200 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~ 200 (300)
+..+||+.++|+.+.+. +.++|.|++...+++.+++.++...+|...+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEE
Confidence 34799999999999876 89999999999999999999877666654443
No 118
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.97 E-value=0.062 Score=49.34 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.9
Q ss_pred ceEEEEeCCCccccc
Q 022266 94 KLTVVLDLDETLVCA 108 (300)
Q Consensus 94 k~tLVLDLDeTLV~s 108 (300)
.+++++||||||+.+
T Consensus 2 ~kli~~DlDGTLl~~ 16 (272)
T PRK15126 2 ARLAAFDMDGTLLMP 16 (272)
T ss_pred ccEEEEeCCCcCcCC
Confidence 368999999999974
No 119
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.92 E-value=0.062 Score=49.55 Aligned_cols=59 Identities=22% Similarity=0.211 Sum_probs=43.1
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-ce
Q 022266 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD 170 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye 170 (300)
+.++++++||||||+++.+ .. -|-..+-|+++.+. ..
T Consensus 5 ~~~~lI~~DlDGTLL~~~~--~i----------------------------------------~~~~~~ai~~l~~~Gi~ 42 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT--YD----------------------------------------WQPAAPWLTRLREAQVP 42 (271)
T ss_pred CCCeEEEEeCccCCcCCCC--cC----------------------------------------cHHHHHHHHHHHHcCCe
Confidence 3578899999999997421 11 12234667777776 88
Q ss_pred EEEEcCCchhhHHHHHHHhcCC
Q 022266 171 LILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 171 vvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
+++.|.-....+..+++.++..
T Consensus 43 ~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 43 VILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred EEEEcCCCHHHHHHHHHHhCCC
Confidence 8899988888888888888653
No 120
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.86 E-value=0.061 Score=46.04 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=28.9
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHH---HHHHHh
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR---PLVDRI 189 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~---~vl~~L 189 (300)
..|++.++++++.+. |.+++.|+.....+. +.++.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 479999999999987 888888888777664 566654
No 121
>PRK10976 putative hydrolase; Provisional
Probab=94.81 E-value=0.073 Score=48.56 Aligned_cols=15 Identities=40% Similarity=0.423 Sum_probs=13.0
Q ss_pred ceEEEEeCCCccccc
Q 022266 94 KLTVVLDLDETLVCA 108 (300)
Q Consensus 94 k~tLVLDLDeTLV~s 108 (300)
.+++++||||||+.+
T Consensus 2 ikli~~DlDGTLl~~ 16 (266)
T PRK10976 2 YQVVASDLDGTLLSP 16 (266)
T ss_pred ceEEEEeCCCCCcCC
Confidence 368999999999975
No 122
>PLN02645 phosphoglycolate phosphatase
Probab=94.54 E-value=0.075 Score=50.31 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=28.2
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
||+.++|+++.+. ..+++-|+........+++++.
T Consensus 47 ~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~ 82 (311)
T PLN02645 47 EGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFE 82 (311)
T ss_pred cCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 8899999999875 9999999988666666665553
No 123
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=94.19 E-value=0.087 Score=48.50 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=25.3
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L 189 (300)
=||+.++|+++.+. ..+++.|+.+..-.+.+.+++
T Consensus 23 ~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l 58 (257)
T TIGR01458 23 VPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL 58 (257)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 47889999999986 889999986655433444433
No 124
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=94.16 E-value=0.11 Score=48.33 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=23.8
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L 189 (300)
=||+.++|+++.+. ..+++.|+++..-...+++++
T Consensus 20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l 55 (279)
T TIGR01452 20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF 55 (279)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 47788999999875 788899986544333333333
No 125
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.14 E-value=0.023 Score=51.60 Aligned_cols=52 Identities=17% Similarity=0.334 Sum_probs=43.2
Q ss_pred eCccHHHHHHHhhhc--ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCcc
Q 022266 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~--yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~ 205 (300)
.=||+-+.++.+++. ||++|-|.++.-+.+.++++.+...+|+.+++-..|.
T Consensus 85 ~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~ 138 (256)
T KOG3120|consen 85 IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACV 138 (256)
T ss_pred CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCccc
Confidence 679999999999986 8999999999999999999988766666555555543
No 126
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=94.02 E-value=0.12 Score=47.07 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.4
Q ss_pred cHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 157 gl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
...+.++.+.+. ..+++-|.-....+..+++.++..
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 367889999887 899999999999999999988743
No 127
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.01 E-value=0.14 Score=48.49 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=29.1
Q ss_pred HHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC
Q 022266 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 158 l~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
+.+-|++|.+. ..+++.|+-+..-+..+.+.+....
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 56778888877 8899999988888888888887653
No 128
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.97 E-value=0.11 Score=45.38 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=31.0
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
..|.+.+.|+++.+. ..++|-|......+..+++.++
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 346777889999887 8999999999999999998753
No 129
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.83 E-value=0.099 Score=49.75 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=21.2
Q ss_pred CccHHHHHHHhhh-----cceEEEEcCCc----hhhHHHHHHHh
Q 022266 155 RPGLREFLKQLSE-----FADLILFTAGL----EGYARPLVDRI 189 (300)
Q Consensus 155 RPgl~eFL~~l~~-----~yevvI~Ta~~----~~YA~~vl~~L 189 (300)
-||+.|+++.+.. ...+++.|++. +.+++.+.+.+
T Consensus 18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 4667777777775 56677777664 34455544443
No 130
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=93.82 E-value=0.13 Score=45.39 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=23.0
Q ss_pred HHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 158 l~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
..+-|+++.+. ..+++-|.-....+..+++.+.
T Consensus 20 ~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~ 53 (225)
T TIGR01482 20 ALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG 53 (225)
T ss_pred HHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 34556666665 6777777777777777777776
No 131
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=93.82 E-value=0.06 Score=49.78 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=65.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc-eeE---------------------------EEecC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSL---------------------------RLYRP 202 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~-f~~---------------------------~l~r~ 202 (300)
...=|.+.++++.+.+. ..++..|+..+.+...-++.|--.++ |+. +++..
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 34778999999999976 99999999999999888887733221 111 11111
Q ss_pred CccccCCCcccccccCCCCCCCcEEEEEcCccccc----cCCCCCccccCCCC
Q 022266 203 STTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFL----LQPLNGIPCIPFSA 251 (300)
Q Consensus 203 ~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs~~~~~----~~p~NgI~I~~f~~ 251 (300)
.. .+......=|..+|..++++|+|||+..... .....+|.--.|++
T Consensus 160 ~~--~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 160 GQ--DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CC--ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 10 0111234456677999999999999998642 23336676666554
No 132
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.63 E-value=0.16 Score=46.48 Aligned_cols=23 Identities=17% Similarity=0.336 Sum_probs=17.1
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCc
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGL 178 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~ 178 (300)
|++.++|+++.+. ..+++.|+++
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~ 43 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNS 43 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCC
Confidence 5677888888876 7788888644
No 133
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.43 E-value=0.075 Score=46.21 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=57.2
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEec-CC-----------ccccCCC-cccccccC
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PS-----------TTSTEYR-EHVKDLSC 218 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r-~~-----------c~~~~~~-~~~KdL~~ 218 (300)
..+||+.++|+.+.+. +.++|-|++...+++.+++.++-..+|...+.. ++ |...... ....-++.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~ 166 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAE 166 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHH
Confidence 4799999999999876 899999999999999999999887777553322 11 1000000 01111223
Q ss_pred CCCCCCcEEEEEcCcccccc
Q 022266 219 LSKDLCRTLIVDNNPFSFLL 238 (300)
Q Consensus 219 L~rdl~~~ViVDDs~~~~~~ 238 (300)
.+.++++++.+-|++.-...
T Consensus 167 ~~~~~~~~~~~gDs~~D~~~ 186 (202)
T TIGR01490 167 EQIDLKDSYAYGDSISDLPL 186 (202)
T ss_pred cCCCHHHcEeeeCCcccHHH
Confidence 35566778888887765443
No 134
>PTZ00174 phosphomannomutase; Provisional
Probab=93.29 E-value=0.2 Score=45.60 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=14.0
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
..+++++||||||+++
T Consensus 4 ~~klia~DlDGTLL~~ 19 (247)
T PTZ00174 4 KKTILLFDVDGTLTKP 19 (247)
T ss_pred CCeEEEEECcCCCcCC
Confidence 4678999999999975
No 135
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=93.20 E-value=0.31 Score=51.16 Aligned_cols=67 Identities=18% Similarity=0.153 Sum_probs=48.0
Q ss_pred CCCcccccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHH
Q 022266 84 DDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLK 163 (300)
Q Consensus 84 ~~~~~~~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~ 163 (300)
.+..+.....++.+++||||||++.... +. +-..+-|+
T Consensus 406 ~~~~~~~~~~~KLIfsDLDGTLLd~d~~----------------------------------------i~--~~t~eAL~ 443 (694)
T PRK14502 406 PSRLPSSGQFKKIVYTDLDGTLLNPLTY----------------------------------------SY--STALDALR 443 (694)
T ss_pred cccCCCcCceeeEEEEECcCCCcCCCCc----------------------------------------cC--HHHHHHHH
Confidence 3444455678899999999999975210 00 12345677
Q ss_pred Hhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 164 QLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 164 ~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
.+.+. ..+++-|.-....+..+++.++..
T Consensus 444 ~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 444 LLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred HHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 77776 889999999888888888888753
No 136
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.82 E-value=0.21 Score=46.77 Aligned_cols=36 Identities=25% Similarity=0.331 Sum_probs=29.4
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhc
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LD 190 (300)
=||+.|||+++.+. -.+++-|+++..-.+.+.++|.
T Consensus 26 ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~ 62 (269)
T COG0647 26 IPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLS 62 (269)
T ss_pred CchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHH
Confidence 48999999999987 8899999988777666666654
No 137
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.29 E-value=0.25 Score=44.82 Aligned_cols=32 Identities=31% Similarity=0.480 Sum_probs=22.8
Q ss_pred ccHHHHHHHhhhc-ceEEEEcCCc----hhhHHHHHH
Q 022266 156 PGLREFLKQLSEF-ADLILFTAGL----EGYARPLVD 187 (300)
Q Consensus 156 Pgl~eFL~~l~~~-yevvI~Ta~~----~~YA~~vl~ 187 (300)
|++.++|+.+.+. +.+++-|++. ..+++.+.+
T Consensus 17 ~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 17 PGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred cCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5788889888876 8888888655 445555544
No 138
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=92.13 E-value=0.42 Score=42.47 Aligned_cols=43 Identities=26% Similarity=0.590 Sum_probs=38.9
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~ 194 (300)
+..|||.++|.+++.++ -.++|-|+|+..|..++++.|--+..
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~ 115 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKER 115 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccc
Confidence 56899999999999998 89999999999999999999875543
No 139
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.85 E-value=0.35 Score=44.24 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=36.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc--eeEEEecC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRP 202 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~--f~~~l~r~ 202 (300)
.-|++.+|++.+.+. ++|++.|.-.+...+...+.|.-.++ +.+.+-|.
T Consensus 121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence 679999999999887 99999999888775556566544443 25566664
No 140
>PLN02423 phosphomannomutase
Probab=91.82 E-value=0.36 Score=44.17 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=12.7
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
.|..+++||||||+++
T Consensus 6 ~~~i~~~D~DGTLl~~ 21 (245)
T PLN02423 6 PGVIALFDVDGTLTAP 21 (245)
T ss_pred cceEEEEeccCCCcCC
Confidence 4556669999999975
No 141
>PLN02887 hydrolase family protein
Probab=91.35 E-value=0.42 Score=49.45 Aligned_cols=59 Identities=14% Similarity=0.082 Sum_probs=41.4
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhc-c
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A 169 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-y 169 (300)
..+.+.+++||||||+.+.+ . .-|...+-|+++.+. .
T Consensus 305 ~~~iKLIa~DLDGTLLn~d~--~----------------------------------------Is~~t~eAI~kl~ekGi 342 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNSKS--Q----------------------------------------ISETNAKALKEALSRGV 342 (580)
T ss_pred ccCccEEEEeCCCCCCCCCC--c----------------------------------------cCHHHHHHHHHHHHCCC
Confidence 34678999999999997522 1 122334667777766 7
Q ss_pred eEEEEcCCchhhHHHHHHHhcC
Q 022266 170 DLILFTAGLEGYARPLVDRIDG 191 (300)
Q Consensus 170 evvI~Ta~~~~YA~~vl~~LDp 191 (300)
.++|-|.-...-+..+++.++.
T Consensus 343 ~~vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 343 KVVIATGKARPAVIDILKMVDL 364 (580)
T ss_pred eEEEEcCCCHHHHHHHHHHhCc
Confidence 8888888877777778877764
No 142
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=90.95 E-value=0.42 Score=44.14 Aligned_cols=38 Identities=13% Similarity=0.234 Sum_probs=26.9
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhh-HHHHHHHhc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGY-ARPLVDRID 190 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~Y-A~~vl~~LD 190 (300)
+.=||+.|||+++-++ -.|.--|+-..+. ...-++-|-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk 161 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLK 161 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHH
Confidence 3669999999999998 5555556655555 555566554
No 143
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=90.52 E-value=0.39 Score=43.59 Aligned_cols=37 Identities=14% Similarity=-0.056 Sum_probs=22.1
Q ss_pred CccHHHHHHHhhhcc-eEEEEcCCchhhHHHHHHHhcC
Q 022266 155 RPGLREFLKQLSEFA-DLILFTAGLEGYARPLVDRIDG 191 (300)
Q Consensus 155 RPgl~eFL~~l~~~y-evvI~Ta~~~~YA~~vl~~LDp 191 (300)
.|.+.+-++.+.+.- .+++-|.-+..-+..+++.+..
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 466666777666664 5555555555556666655543
No 144
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=89.72 E-value=0.53 Score=48.33 Aligned_cols=84 Identities=11% Similarity=0.100 Sum_probs=59.0
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDD 231 (300)
..|||+.+++++|++. ++++|-|+..+.+|+.+++.++.+ +| . .+...+....++.+. .+.+++++|-|
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~-~~~p~~K~~~v~~l~---~~~~~v~~VGD 474 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----A-EVLPDDKAALIKELQ---EKGRVVAMVGD 474 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----c-cCChHHHHHHHHHHH---HcCCEEEEEeC
Confidence 3899999999999986 999999999999999999998764 22 1 221111123344443 35578999999
Q ss_pred CccccccCCCCCccc
Q 022266 232 NPFSFLLQPLNGIPC 246 (300)
Q Consensus 232 s~~~~~~~p~NgI~I 246 (300)
...-...-...++.|
T Consensus 475 g~nD~~al~~A~vgi 489 (562)
T TIGR01511 475 GINDAPALAQADVGI 489 (562)
T ss_pred CCccHHHHhhCCEEE
Confidence 987665433444443
No 145
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.70 E-value=0.67 Score=42.94 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=23.6
Q ss_pred CccHHHHHHHhhh--cceEEEEcCCchhhHHHHHHHh
Q 022266 155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 155 RPgl~eFL~~l~~--~yevvI~Ta~~~~YA~~vl~~L 189 (300)
-|.+.+-|+.|++ ...++|-|.-...-+..+++.+
T Consensus 38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 3666677777775 2667777777777676666544
No 146
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=89.29 E-value=0.17 Score=44.11 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=12.5
Q ss_pred EEEEeCCCcccccc
Q 022266 96 TVVLDLDETLVCAY 109 (300)
Q Consensus 96 tLVLDLDeTLV~s~ 109 (300)
.|||||||||+++.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 58999999999975
No 147
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=88.88 E-value=0.97 Score=38.59 Aligned_cols=82 Identities=15% Similarity=0.176 Sum_probs=51.2
Q ss_pred EeCccHHHHHHHhhhcceEEEEcCCchhh--HHHHHHHhcCCC-ce--eEEEecCCccccCCCcccccccCCCCCCCcEE
Q 022266 153 FERPGLREFLKQLSEFADLILFTAGLEGY--ARPLVDRIDGEN-LF--SLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~yevvI~Ta~~~~Y--A~~vl~~LDp~~-~f--~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~V 227 (300)
..-||+++-+++|-++|+|+|-|+++..+ .+.-.+-|--.- ++ +++++|.. |++-+. =+
T Consensus 68 ~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn----------Knivka------Di 131 (180)
T COG4502 68 GVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN----------KNIVKA------DI 131 (180)
T ss_pred CccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC----------CCeEEe------eE
Confidence 36799999999999999999999995443 333333221110 11 22333322 222111 27
Q ss_pred EEEcCccccccCCCCCccccCCC
Q 022266 228 IVDNNPFSFLLQPLNGIPCIPFS 250 (300)
Q Consensus 228 iVDDs~~~~~~~p~NgI~I~~f~ 250 (300)
+|||+|.......+|-|.-..=+
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~H 154 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHH 154 (180)
T ss_pred EecCCchhhhhccCceEEEeccc
Confidence 99999998887777777655544
No 148
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.44 E-value=0.53 Score=42.81 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=30.8
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
.=||+.+|++.+.+. ++|++-|.-.+..-+.-++.|.-.
T Consensus 116 aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~ 155 (229)
T PF03767_consen 116 AIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKA 155 (229)
T ss_dssp EETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHc
Confidence 568999999999998 899999987777666666665433
No 149
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=88.34 E-value=0.61 Score=40.26 Aligned_cols=76 Identities=18% Similarity=0.238 Sum_probs=57.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC--ceeEEEecCCccccCCCcccccccCCCCCCCcEEEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~--~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVD 230 (300)
.||++.++|+.|++. +.++|.|......|..+.+.++... .|.... +.. +...+.+-++.++.+.+.|++|-
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~kP-~~k~~~~~i~~l~~~~~~v~~vG 202 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GKP-EPKIFLRIIKELQVKPGEVAMVG 202 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TTT-HHHHHHHHHHHHTCTGGGEEEEE
T ss_pred chhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----ccc-cchhHHHHHHHHhcCCCEEEEEc
Confidence 899999999999997 8999999999999999999998744 222111 111 11233455566777778999999
Q ss_pred cCcc
Q 022266 231 NNPF 234 (300)
Q Consensus 231 Ds~~ 234 (300)
|...
T Consensus 203 Dg~n 206 (215)
T PF00702_consen 203 DGVN 206 (215)
T ss_dssp SSGG
T ss_pred cCHH
Confidence 9863
No 150
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=87.64 E-value=0.32 Score=42.74 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=13.7
Q ss_pred eEEEEeCCCccccccc
Q 022266 95 LTVVLDLDETLVCAYE 110 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~~ 110 (300)
+.++|||||||+++..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5799999999999753
No 151
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=86.78 E-value=0.96 Score=43.81 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=44.9
Q ss_pred EEEEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh-c-----C--CCceeEEEecC
Q 022266 150 VTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-D-----G--ENLFSLRLYRP 202 (300)
Q Consensus 150 ~~v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L-D-----p--~~~f~~~l~r~ 202 (300)
-|+.+-||+.++|+++.+. ..+.|-|++...|++.+++.+ + + ..+|+.++...
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a 242 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA 242 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC
Confidence 4678899999999999987 899999999999999999997 5 2 36777665543
No 152
>PLN02151 trehalose-phosphatase
Probab=86.58 E-value=1.1 Score=43.70 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=43.4
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcce
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD 170 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye 170 (300)
..++..|+||+||||+--.. .|. -+..-|.+.+-|+.|++.+.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~---~P~----------------------------------~A~~~~~~~~aL~~La~~~~ 137 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVD---DPD----------------------------------RAFMSKKMRNTVRKLAKCFP 137 (354)
T ss_pred cCCceEEEEecCccCCCCCC---Ccc----------------------------------cccCCHHHHHHHHHHhcCCC
Confidence 34778899999999994210 000 02356888899999998888
Q ss_pred EEEEcCCchhhHHHHHH
Q 022266 171 LILFTAGLEGYARPLVD 187 (300)
Q Consensus 171 vvI~Ta~~~~YA~~vl~ 187 (300)
++|-|--...-++.++.
T Consensus 138 vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 138 TAIVSGRCREKVSSFVK 154 (354)
T ss_pred EEEEECCCHHHHHHHcC
Confidence 88988887777777664
No 153
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=86.50 E-value=0.35 Score=42.02 Aligned_cols=15 Identities=20% Similarity=0.158 Sum_probs=12.8
Q ss_pred eEEEEeCCCcccccc
Q 022266 95 LTVVLDLDETLVCAY 109 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~ 109 (300)
+.|+|||||||+++.
T Consensus 1 k~viFDlDGTL~d~~ 15 (203)
T TIGR02252 1 KLITFDAVGTLLALK 15 (203)
T ss_pred CeEEEecCCceeeeC
Confidence 468999999999864
No 154
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=86.48 E-value=0.4 Score=43.45 Aligned_cols=15 Identities=27% Similarity=0.098 Sum_probs=13.2
Q ss_pred eEEEEeCCCcccccc
Q 022266 95 LTVVLDLDETLVCAY 109 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~ 109 (300)
+.++||+||||+++.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 579999999999963
No 155
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=86.35 E-value=0.37 Score=44.22 Aligned_cols=16 Identities=25% Similarity=0.073 Sum_probs=13.9
Q ss_pred ceEEEEeCCCcccccc
Q 022266 94 KLTVVLDLDETLVCAY 109 (300)
Q Consensus 94 k~tLVLDLDeTLV~s~ 109 (300)
-+++|||+||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 4689999999999974
No 156
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=85.89 E-value=0.38 Score=43.44 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=13.7
Q ss_pred ceEEEEeCCCcccccc
Q 022266 94 KLTVVLDLDETLVCAY 109 (300)
Q Consensus 94 k~tLVLDLDeTLV~s~ 109 (300)
-+.++|||||||+++.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3689999999999863
No 157
>PLN03017 trehalose-phosphatase
Probab=85.44 E-value=1.3 Score=43.23 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=26.5
Q ss_pred eCccHHHHHHHhhhcceEEEEcCCchhhHHHHHH
Q 022266 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVD 187 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~yevvI~Ta~~~~YA~~vl~ 187 (300)
.-|.+.+-|++|++.+.++|-|--...-++.+++
T Consensus 134 i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 134 MSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 4467778888998878899998888777777643
No 158
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=85.25 E-value=2.1 Score=40.17 Aligned_cols=86 Identities=8% Similarity=0.074 Sum_probs=50.7
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc--eeEEEecCCcccc-CCCcccccc--cC-CCCCCCcE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPSTTST-EYREHVKDL--SC-LSKDLCRT 226 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~--f~~~l~r~~c~~~-~~~~~~KdL--~~-L~rdl~~~ 226 (300)
.=|++.+|++++.++ ++|++.|.-.+..-+.-++.|...++ ....+-|+.-... +...-+|-- .. +...-.=+
T Consensus 146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv 225 (275)
T TIGR01680 146 ALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIV 225 (275)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEE
Confidence 458999999999887 99999999887776666666655555 2555666431111 000111211 11 11222335
Q ss_pred EEEEcCccccccC
Q 022266 227 LIVDNNPFSFLLQ 239 (300)
Q Consensus 227 ViVDDs~~~~~~~ 239 (300)
..|+|+..-+...
T Consensus 226 ~~iGDq~sDl~G~ 238 (275)
T TIGR01680 226 GIIGDQWNDLKGE 238 (275)
T ss_pred EEECCCHHhccCC
Confidence 6788887776544
No 159
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=85.10 E-value=0.47 Score=43.60 Aligned_cols=88 Identities=11% Similarity=-0.019 Sum_probs=65.3
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCC--CcccccccCCCCCCCcEEEEE
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY--REHVKDLSCLSKDLCRTLIVD 230 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~--~~~~KdL~~L~rdl~~~ViVD 230 (300)
..+ ..++|+++.+. +.|.+.|+...++= .++..++...+|++++....-...|. ..|.+-|++++..++.+|.||
T Consensus 115 ~~~-~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIg 192 (237)
T KOG3085|consen 115 LDG-MQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIG 192 (237)
T ss_pred ccH-HHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEec
Confidence 444 44999999987 89999999988776 77777777778887765433333333 367788999999999999999
Q ss_pred cCccc-cccCCCCC
Q 022266 231 NNPFS-FLLQPLNG 243 (300)
Q Consensus 231 Ds~~~-~~~~p~Ng 243 (300)
|+..+ +.....-|
T Consensus 193 D~l~nD~~gA~~~G 206 (237)
T KOG3085|consen 193 DLLENDYEGARNLG 206 (237)
T ss_pred CccccccHhHHHcC
Confidence 99988 54433333
No 160
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=84.80 E-value=1.5 Score=38.30 Aligned_cols=82 Identities=22% Similarity=0.346 Sum_probs=46.0
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchh----hHHHHHHHhcCC--C-ceeEEEecCCccccCCCcccccccCCCCCC
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGE--N-LFSLRLYRPSTTSTEYREHVKDLSCLSKDL 223 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~----YA~~vl~~LDp~--~-~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl 223 (300)
...=||+.|.|+.|.+. +++++-|++... .++.-.+-|+.+ + ....++...+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----------CC--eEecc-
Confidence 44679999999999998 588888877654 233333333322 1 1222222211 21 23333
Q ss_pred CcEEEEEcCccccccCCCCCccccCC
Q 022266 224 CRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 224 ~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
|+|||++.........|+++-=|
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~iLf 161 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVILF 161 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred ---EEecCChHHHHhccCCCceEEEE
Confidence 89999999987766777555444
No 161
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=84.46 E-value=0.42 Score=40.59 Aligned_cols=15 Identities=33% Similarity=0.518 Sum_probs=12.6
Q ss_pred EEEEeCCCccccccc
Q 022266 96 TVVLDLDETLVCAYE 110 (300)
Q Consensus 96 tLVLDLDeTLV~s~~ 110 (300)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999998753
No 162
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=84.02 E-value=0.58 Score=43.78 Aligned_cols=17 Identities=24% Similarity=0.210 Sum_probs=14.7
Q ss_pred CceEEEEeCCCcccccc
Q 022266 93 QKLTVVLDLDETLVCAY 109 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~ 109 (300)
+-+.+|||+||||+++.
T Consensus 39 ~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 39 LPEALLFDCDGVLVETE 55 (286)
T ss_pred CCcEEEEeCceeEEccc
Confidence 45789999999999975
No 163
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=83.44 E-value=0.55 Score=39.73 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=11.6
Q ss_pred EEEeCCCcccccc
Q 022266 97 VVLDLDETLVCAY 109 (300)
Q Consensus 97 LVLDLDeTLV~s~ 109 (300)
|+||+||||+++.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999864
No 164
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=83.44 E-value=0.58 Score=40.99 Aligned_cols=15 Identities=33% Similarity=0.490 Sum_probs=13.2
Q ss_pred eEEEEeCCCcccccc
Q 022266 95 LTVVLDLDETLVCAY 109 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~ 109 (300)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 579999999999864
No 165
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=83.40 E-value=0.59 Score=40.53 Aligned_cols=15 Identities=27% Similarity=0.222 Sum_probs=12.9
Q ss_pred eEEEEeCCCcccccc
Q 022266 95 LTVVLDLDETLVCAY 109 (300)
Q Consensus 95 ~tLVLDLDeTLV~s~ 109 (300)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 479999999999864
No 166
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=82.45 E-value=1.5 Score=39.85 Aligned_cols=15 Identities=33% Similarity=0.366 Sum_probs=13.5
Q ss_pred CceEEEEeCCCcccc
Q 022266 93 QKLTVVLDLDETLVC 107 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~ 107 (300)
+|..|+||+||||+.
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 678899999999995
No 167
>PRK09449 dUMP phosphatase; Provisional
Probab=82.42 E-value=0.64 Score=41.02 Aligned_cols=15 Identities=33% Similarity=0.271 Sum_probs=12.8
Q ss_pred ceEEEEeCCCccccc
Q 022266 94 KLTVVLDLDETLVCA 108 (300)
Q Consensus 94 k~tLVLDLDeTLV~s 108 (300)
-++++|||||||++.
T Consensus 3 ~k~iiFDlDGTLid~ 17 (224)
T PRK09449 3 YDWILFDADETLFHF 17 (224)
T ss_pred ccEEEEcCCCchhcc
Confidence 368999999999973
No 168
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.90 E-value=2.9 Score=39.13 Aligned_cols=61 Identities=18% Similarity=0.153 Sum_probs=45.6
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcc
Q 022266 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169 (300)
Q Consensus 90 ~~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y 169 (300)
...+|.+++||.||||..-.. .|. -+..=+++.+-|..|+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~---~p~----------------------------------~a~~~~~l~~lL~~Las~~ 56 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVP---HPE----------------------------------AAVPDDRLLSLLQDLASDP 56 (266)
T ss_pred ccccceEEEEecccccccccc---Ccc----------------------------------ccCCCHHHHHHHHHHHhcC
Confidence 345889999999999996421 010 0224567889999999998
Q ss_pred e--EEEEcCCchhhHHHHHH
Q 022266 170 D--LILFTAGLEGYARPLVD 187 (300)
Q Consensus 170 e--vvI~Ta~~~~YA~~vl~ 187 (300)
. ++|.|.-+..-.+..+.
T Consensus 57 ~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 57 RNVVAIISGRSLAELERLFG 76 (266)
T ss_pred CCeEEEEeCCCHHHHHHhcC
Confidence 8 88888888888888777
No 169
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=80.55 E-value=1.6 Score=38.81 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=67.1
Q ss_pred EEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHH----HHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcE
Q 022266 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLV----DRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT 226 (300)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl----~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ 226 (300)
-.+=|.+-+++++-.+. -.|+|||+|+-. |+++. +.-|..++|+..+-...-...+...|.|.+..+|-++..+
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 34679999999998876 899999999854 33322 2235556777655443333334457889999999999999
Q ss_pred EEEEcCccccccCCCCCcc
Q 022266 227 LIVDNNPFSFLLQPLNGIP 245 (300)
Q Consensus 227 ViVDDs~~~~~~~p~NgI~ 245 (300)
+++-|++.......+-|+.
T Consensus 181 lFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 181 LFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred EEecCCHHHHHHHHhcchh
Confidence 9999999987666665553
No 170
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=80.54 E-value=3.3 Score=35.77 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=27.7
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L 189 (300)
+.+||+.++...+.+. |.++=-|+-.-..|...-+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 4799999999999998 888777776655555444433
No 171
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=80.39 E-value=4.7 Score=37.00 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=24.3
Q ss_pred HHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC
Q 022266 160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (300)
Q Consensus 160 eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~ 193 (300)
.-+.++.+. |+|+.-||-+..--...-+.|+-.+
T Consensus 30 pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 30 PVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred hHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 456677776 9999998887766666667777553
No 172
>PLN02580 trehalose-phosphatase
Probab=79.42 E-value=3.7 Score=40.42 Aligned_cols=61 Identities=18% Similarity=0.240 Sum_probs=46.4
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhccccccCcccchhhcccCCccCCCCcccceEEEEeCccHHHHHHHhhhcce
Q 022266 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD 170 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~~~s~~p~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye 170 (300)
..++..|+||.||||.--.. .|. -+..=|++.+-|+.|++.+.
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~---~Pd----------------------------------~A~~s~~~~~aL~~La~~~~ 158 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVD---DPD----------------------------------RALMSDAMRSAVKNVAKYFP 158 (384)
T ss_pred hcCCeEEEEecCCccCCCCC---Ccc----------------------------------cccCCHHHHHHHHHHhhCCC
Confidence 45778899999999984211 010 03356899999999999999
Q ss_pred EEEEcCCchhhHHHHHHH
Q 022266 171 LILFTAGLEGYARPLVDR 188 (300)
Q Consensus 171 vvI~Ta~~~~YA~~vl~~ 188 (300)
++|-|--...-++..+..
T Consensus 159 VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 159 TAIISGRSRDKVYELVGL 176 (384)
T ss_pred EEEEeCCCHHHHHHHhCC
Confidence 999999988888887763
No 173
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=79.36 E-value=1 Score=46.01 Aligned_cols=84 Identities=11% Similarity=0.132 Sum_probs=61.2
Q ss_pred eCccHHHHHHHhhhc-c-eEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEc
Q 022266 154 ERPGLREFLKQLSEF-A-DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-y-evvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDD 231 (300)
.|||+.+.|++|.+. + +++|-|+..+.+|+.+++.++..++|... .. +++ .+-++.+....+++++|-|
T Consensus 363 l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~------~p-~~K--~~~i~~l~~~~~~v~~vGD 433 (536)
T TIGR01512 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAEL------LP-EDK--LEIVKELREKYGPVAMVGD 433 (536)
T ss_pred chHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhcc------Cc-HHH--HHHHHHHHhcCCEEEEEeC
Confidence 899999999999987 8 99999999999999999999887765422 11 111 2233334455589999999
Q ss_pred CccccccCCCCCccc
Q 022266 232 NPFSFLLQPLNGIPC 246 (300)
Q Consensus 232 s~~~~~~~p~NgI~I 246 (300)
...-...-...++-|
T Consensus 434 g~nD~~al~~A~vgi 448 (536)
T TIGR01512 434 GINDAPALAAADVGI 448 (536)
T ss_pred CHHHHHHHHhCCEEE
Confidence 987665444444433
No 174
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=78.42 E-value=1.5 Score=44.89 Aligned_cols=84 Identities=13% Similarity=0.119 Sum_probs=60.6
Q ss_pred eCccHHHHHHHhhhc--ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEc
Q 022266 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~--yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDD 231 (300)
.|||+.+.|++|.+. ++++|-|+..+.+|+.+++.++...+|... ...+....++.+. ...+++++|-|
T Consensus 385 ~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~------~p~~K~~~v~~l~---~~~~~v~~vGD 455 (556)
T TIGR01525 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL------LPEDKLAIVKELQ---EEGGVVAMVGD 455 (556)
T ss_pred chHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC------CHHHHHHHHHHHH---HcCCEEEEEEC
Confidence 999999999999874 899999999999999999999987666432 1111113344443 34568999999
Q ss_pred CccccccCCCCCccc
Q 022266 232 NPFSFLLQPLNGIPC 246 (300)
Q Consensus 232 s~~~~~~~p~NgI~I 246 (300)
...-...-...++-|
T Consensus 456 g~nD~~al~~A~vgi 470 (556)
T TIGR01525 456 GINDAPALAAADVGI 470 (556)
T ss_pred ChhHHHHHhhCCEeE
Confidence 988765444444433
No 175
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=78.31 E-value=1 Score=36.99 Aligned_cols=13 Identities=46% Similarity=0.649 Sum_probs=11.4
Q ss_pred EEEeCCCcccccc
Q 022266 97 VVLDLDETLVCAY 109 (300)
Q Consensus 97 LVLDLDeTLV~s~ 109 (300)
|+||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999864
No 176
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=78.25 E-value=3 Score=44.12 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=25.9
Q ss_pred CccHHHHHHHhhh--cceEEEEcCCchhhHHHHHHHh
Q 022266 155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 155 RPgl~eFL~~l~~--~yevvI~Ta~~~~YA~~vl~~L 189 (300)
-|.+.+.|+.|.+ ...|+|-|.-.....+..+..+
T Consensus 516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~ 552 (726)
T PRK14501 516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL 552 (726)
T ss_pred CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 4567788888887 4778888888877777766544
No 177
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=73.56 E-value=4.4 Score=37.04 Aligned_cols=14 Identities=36% Similarity=0.423 Sum_probs=12.2
Q ss_pred CceEEEEeCCCccc
Q 022266 93 QKLTVVLDLDETLV 106 (300)
Q Consensus 93 ~k~tLVLDLDeTLV 106 (300)
++.+|+-||||||+
T Consensus 1 ~~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 1 PPRLLASDLDGTLI 14 (247)
T ss_dssp -SEEEEEETBTTTB
T ss_pred CCEEEEEECCCCCc
Confidence 36789999999999
No 178
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=73.24 E-value=7.8 Score=34.52 Aligned_cols=37 Identities=22% Similarity=0.124 Sum_probs=32.9
Q ss_pred EeCccHHHHHH-Hhhh-cceEEEEcCCchhhHHHHHHHh
Q 022266 153 FERPGLREFLK-QLSE-FADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 153 ~~RPgl~eFL~-~l~~-~yevvI~Ta~~~~YA~~vl~~L 189 (300)
..+||+.+.|+ ++.+ -+.++|-|++...|++++++..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 46999999996 7885 6999999999999999999773
No 179
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=71.16 E-value=6.8 Score=33.14 Aligned_cols=45 Identities=16% Similarity=0.440 Sum_probs=36.2
Q ss_pred CccHH----HHHHHhhh-cceEEEEcCCchhhHHHHHHHhcCCC--ceeEEE
Q 022266 155 RPGLR----EFLKQLSE-FADLILFTAGLEGYARPLVDRIDGEN--LFSLRL 199 (300)
Q Consensus 155 RPgl~----eFL~~l~~-~yevvI~Ta~~~~YA~~vl~~LDp~~--~f~~~l 199 (300)
+|++. +||+++.+ .++++|-|++...+++.+++.++-.. .+...+
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 46666 99999865 59999999999999999999887654 444444
No 180
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=69.14 E-value=2.7 Score=37.49 Aligned_cols=16 Identities=38% Similarity=0.416 Sum_probs=14.0
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
-+++.+||+||||++.
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 5778999999999975
No 181
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=67.99 E-value=5 Score=35.85 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=11.0
Q ss_pred EEEEeCCCccccc
Q 022266 96 TVVLDLDETLVCA 108 (300)
Q Consensus 96 tLVLDLDeTLV~s 108 (300)
+++.||||||++.
T Consensus 1 li~~DlDgTLl~~ 13 (236)
T TIGR02471 1 LIITDLDNTLLGD 13 (236)
T ss_pred CeEEeccccccCC
Confidence 3788999999974
No 182
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=67.55 E-value=3.1 Score=36.18 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=11.8
Q ss_pred EEEEeCCCccccc
Q 022266 96 TVVLDLDETLVCA 108 (300)
Q Consensus 96 tLVLDLDeTLV~s 108 (300)
++||||||||++.
T Consensus 2 ~viFDldgvL~d~ 14 (199)
T PRK09456 2 LYIFDLGNVIVDI 14 (199)
T ss_pred EEEEeCCCccccC
Confidence 6899999999985
No 183
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.93 E-value=3.7 Score=35.93 Aligned_cols=16 Identities=31% Similarity=0.370 Sum_probs=13.8
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
..+.++||+||||++.
T Consensus 3 ~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 3 MIKAILFDLDGTLLDF 18 (229)
T ss_pred ceeEEEEecCCccccc
Confidence 4578999999999985
No 184
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=65.46 E-value=7.1 Score=36.13 Aligned_cols=88 Identities=19% Similarity=0.260 Sum_probs=50.7
Q ss_pred EEEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcC---C-CceeEEEecC-Cccc---cCC--CcccccccCC
Q 022266 151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG---E-NLFSLRLYRP-STTS---TEY--REHVKDLSCL 219 (300)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp---~-~~f~~~l~r~-~c~~---~~~--~~~~KdL~~L 219 (300)
-+.+|.|+.+|++.|.++ --+.|||||.-.-.+.+++.-.. + +.++..+.-+ +-.. ... ..+.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 367999999999999997 79999999999999999998742 1 2344433322 1110 000 0223332222
Q ss_pred --------CCCCCcEEEEEcCcccccc
Q 022266 220 --------SKDLCRTLIVDNNPFSFLL 238 (300)
Q Consensus 220 --------~rdl~~~ViVDDs~~~~~~ 238 (300)
-..-.|+|++-|+..-..+
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~M 194 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHM 194 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGT
T ss_pred cCchHHHHhccCCcEEEecCccCChHh
Confidence 1356899999999986543
No 185
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=64.01 E-value=6 Score=40.26 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=17.8
Q ss_pred cceEEEEcCCchhhHHHHHHH
Q 022266 168 FADLILFTAGLEGYARPLVDR 188 (300)
Q Consensus 168 ~yevvI~Ta~~~~YA~~vl~~ 188 (300)
+=+.+|-||+.+.|++++++.
T Consensus 122 ~g~~vvVSASp~~~Vepfa~~ 142 (497)
T PLN02177 122 FGKRYIITASPRIMVEPFVKT 142 (497)
T ss_pred CCCEEEEECCcHHHHHHHHHH
Confidence 334599999999999999976
No 186
>PLN02382 probable sucrose-phosphatase
Probab=62.89 E-value=4.8 Score=39.83 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=14.7
Q ss_pred CCceEEEEeCCCccccc
Q 022266 92 LQKLTVVLDLDETLVCA 108 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s 108 (300)
..++.|+-||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 36889999999999965
No 187
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=62.39 E-value=4.4 Score=34.31 Aligned_cols=13 Identities=38% Similarity=0.531 Sum_probs=11.1
Q ss_pred EEEeCCCcccccc
Q 022266 97 VVLDLDETLVCAY 109 (300)
Q Consensus 97 LVLDLDeTLV~s~ 109 (300)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999753
No 188
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=61.76 E-value=14 Score=36.45 Aligned_cols=29 Identities=17% Similarity=0.238 Sum_probs=18.8
Q ss_pred ccCCCCCCcccccCCceEEEEeCCCcccc
Q 022266 79 VRDSGDDVVSEERLQKLTVVLDLDETLVC 107 (300)
Q Consensus 79 ~~~~~~~~~~~~~~~k~tLVLDLDeTLV~ 107 (300)
+++..+|..+....-....|.|||||||-
T Consensus 182 gkk~~~psp~~ds~~eRVFiWDlDEtiIi 210 (468)
T KOG3107|consen 182 GKKKTGPSPPGDSTLERVFIWDLDETIII 210 (468)
T ss_pred ccccCCCCCCCCCcceeEEEeeccchHHH
Confidence 33333344444455566789999999993
No 189
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=61.75 E-value=14 Score=40.27 Aligned_cols=15 Identities=33% Similarity=0.467 Sum_probs=13.5
Q ss_pred CceEEEEeCCCcccc
Q 022266 93 QKLTVVLDLDETLVC 107 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~ 107 (300)
++..++||+||||+.
T Consensus 595 ~~rlI~LDyDGTLlp 609 (854)
T PLN02205 595 TTRAILLDYDGTLMP 609 (854)
T ss_pred cCeEEEEecCCcccC
Confidence 678899999999995
No 190
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=61.40 E-value=3.6 Score=34.53 Aligned_cols=12 Identities=33% Similarity=0.553 Sum_probs=10.6
Q ss_pred EEEeCCCccccc
Q 022266 97 VVLDLDETLVCA 108 (300)
Q Consensus 97 LVLDLDeTLV~s 108 (300)
+|||+||||+..
T Consensus 2 ~~fD~DgTl~~~ 13 (177)
T TIGR01488 2 AIFDFDGTLTRQ 13 (177)
T ss_pred EEecCccccccc
Confidence 689999999964
No 191
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=57.32 E-value=18 Score=38.95 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=27.1
Q ss_pred eCccHHHHHHHhhhc--ceEEEEcCCchhhHHHHHHH
Q 022266 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDR 188 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~--yevvI~Ta~~~~YA~~vl~~ 188 (300)
.-|++.+-|+.|++. -.|+|-|.-...-.+..+..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 457888889999875 67888888777777777654
No 192
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=57.24 E-value=5.3 Score=34.44 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=10.7
Q ss_pred EEEeCCCccccc
Q 022266 97 VVLDLDETLVCA 108 (300)
Q Consensus 97 LVLDLDeTLV~s 108 (300)
.+||+||||+..
T Consensus 2 a~FD~DgTL~~~ 13 (202)
T TIGR01490 2 AFFDFDGTLTAK 13 (202)
T ss_pred eEEccCCCCCCC
Confidence 689999999974
No 193
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=54.84 E-value=18 Score=35.69 Aligned_cols=19 Identities=21% Similarity=0.221 Sum_probs=15.8
Q ss_pred cCCceEEEEeCCCcccccc
Q 022266 91 RLQKLTVVLDLDETLVCAY 109 (300)
Q Consensus 91 ~~~k~tLVLDLDeTLV~s~ 109 (300)
....+.+-||+|||||+..
T Consensus 72 ~~~~K~i~FD~dgtlI~t~ 90 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTK 90 (422)
T ss_pred CCCcceEEEecCCceeecC
Confidence 4567888999999999864
No 194
>PRK10671 copA copper exporting ATPase; Provisional
Probab=53.66 E-value=13 Score=40.06 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=59.9
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEcC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN 232 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDDs 232 (300)
.||++.+.|+++.+. +++++.|...+..|+.+++.++...+|... ...+....++. ++...+++++|-|.
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~------~p~~K~~~i~~---l~~~~~~v~~vGDg 721 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV------LPDGKAEAIKR---LQSQGRQVAMVGDG 721 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC------CHHHHHHHHHH---HhhcCCEEEEEeCC
Confidence 799999999999876 999999999999999999999876554321 11111123333 34456789999999
Q ss_pred ccccccCCCCCccc
Q 022266 233 PFSFLLQPLNGIPC 246 (300)
Q Consensus 233 ~~~~~~~p~NgI~I 246 (300)
..-...-...|+-|
T Consensus 722 ~nD~~al~~Agvgi 735 (834)
T PRK10671 722 INDAPALAQADVGI 735 (834)
T ss_pred HHHHHHHHhCCeeE
Confidence 87665444444433
No 195
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=53.48 E-value=17 Score=32.62 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=22.9
Q ss_pred EeCccHHHHHHHhhhcce--EEEEcCCchhhHHHH
Q 022266 153 FERPGLREFLKQLSEFAD--LILFTAGLEGYARPL 185 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~ye--vvI~Ta~~~~YA~~v 185 (300)
..-|++.+.|+.|+.... |+|-|.-.....+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 467899999999999866 888888877774444
No 196
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=52.91 E-value=82 Score=26.54 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=50.9
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCc-hhhHHHHHHHhcCCC---------ceeEEEecCCccccCCCcccccccCC-CC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGEN---------LFSLRLYRPSTTSTEYREHVKDLSCL-SK 221 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~-~~YA~~vl~~LDp~~---------~f~~~l~r~~c~~~~~~~~~KdL~~L-~r 221 (300)
.=|...--|..|++. -++++.|.+. +++|.+.++.+-... .|.....-+... - .+.|++..- |.
T Consensus 45 fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsk---l-ghfke~~n~s~~ 120 (144)
T KOG4549|consen 45 FYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSK---L-GHFKEFTNNSNS 120 (144)
T ss_pred eccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCccc---c-hhHHHHhhccCc
Confidence 457777889999987 8999988875 899999999886432 133333322211 1 233655443 55
Q ss_pred CCCcEEEEEcCccc
Q 022266 222 DLCRTLIVDNNPFS 235 (300)
Q Consensus 222 dl~~~ViVDDs~~~ 235 (300)
..++..+.||..+.
T Consensus 121 ~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 121 IEKNKQVFDDESRN 134 (144)
T ss_pred chhceeeecccccC
Confidence 67788888886543
No 197
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=51.81 E-value=11 Score=39.80 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=38.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~ 194 (300)
.||++.+.+++|.+. .++++-|......|..+.+.++-..+
T Consensus 447 ~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v 488 (675)
T TIGR01497 447 VKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDF 488 (675)
T ss_pred chhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEE
Confidence 999999999999987 99999999999999999999987544
No 198
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=50.77 E-value=13 Score=39.30 Aligned_cols=41 Identities=15% Similarity=0.306 Sum_probs=37.8
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~ 194 (300)
.||++.|.+++|++. .++++-|--.+..|..|.+.++-..+
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v 487 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF 487 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE
Confidence 799999999999987 89999999999999999999987543
No 199
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=47.64 E-value=15 Score=38.87 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=38.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCc
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~ 194 (300)
.||++.+.+++|++. .++++-|--.+..|..+.+.++-..+
T Consensus 442 ~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v 483 (673)
T PRK14010 442 IKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRF 483 (673)
T ss_pred CcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceE
Confidence 899999999999986 89999999999999999999987653
No 200
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=45.34 E-value=13 Score=31.82 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=12.0
Q ss_pred eEEEEeCCCccccc
Q 022266 95 LTVVLDLDETLVCA 108 (300)
Q Consensus 95 ~tLVLDLDeTLV~s 108 (300)
.+++||.||||...
T Consensus 2 ~~i~fDktGTLt~~ 15 (215)
T PF00702_consen 2 DAICFDKTGTLTQG 15 (215)
T ss_dssp SEEEEECCTTTBES
T ss_pred eEEEEecCCCcccC
Confidence 47999999999864
No 201
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=42.24 E-value=46 Score=36.63 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=30.0
Q ss_pred eCccHHHHHHHhhhc--ceEEEEcCCchhhHHHHHHHh
Q 022266 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~--yevvI~Ta~~~~YA~~vl~~L 189 (300)
.-|++.+.|+.|++. ..|+|-|.-...-.+..+..+
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 457889999999975 789999999888888887665
No 202
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=39.65 E-value=19 Score=36.62 Aligned_cols=23 Identities=4% Similarity=0.026 Sum_probs=20.0
Q ss_pred ceEEEEcCCchhhHHHHHHH-hcC
Q 022266 169 ADLILFTAGLEGYARPLVDR-IDG 191 (300)
Q Consensus 169 yevvI~Ta~~~~YA~~vl~~-LDp 191 (300)
-+++|-|++.+.++++-++. +.-
T Consensus 109 g~~vVVTAsPrvmVEpFake~LG~ 132 (498)
T PLN02499 109 DKRVVVTRMPRVMVERFAKEHLRA 132 (498)
T ss_pred CeEEEEeCCHHHHHHHHHHHhcCC
Confidence 38999999999999999998 543
No 203
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=38.76 E-value=3.2 Score=37.47 Aligned_cols=89 Identities=17% Similarity=0.021 Sum_probs=55.0
Q ss_pred CccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEE--EecCCccccCCC--cccccccCCCC-CCCcEEE
Q 022266 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLR--LYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI 228 (300)
Q Consensus 155 RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~--l~r~~c~~~~~~--~~~KdL~~L~r-dl~~~Vi 228 (300)
-|++.+.|+.+.+. ..+ |-|+....|+...+..++...++... ...+.....|.. .+.+-++.++. +.+++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 48999999998764 555 66999999998777776665444321 223222122222 34455566664 5678999
Q ss_pred EEcCc-cccccCCCCCc
Q 022266 229 VDNNP-FSFLLQPLNGI 244 (300)
Q Consensus 229 VDDs~-~~~~~~p~NgI 244 (300)
|.|+. .-......+|+
T Consensus 219 vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 219 VGDSFYTDILGANRLGI 235 (242)
T ss_pred ECCCcHHHHHHHHHCCC
Confidence 99995 43433334444
No 204
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=38.71 E-value=57 Score=25.08 Aligned_cols=16 Identities=44% Similarity=0.405 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
...+|||+=|||-|++
T Consensus 38 ~~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 38 GVLTLVLEEDGTAVDS 53 (81)
T ss_pred CceEEEEecCCCEEcc
Confidence 3489999999999975
No 205
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=38.40 E-value=60 Score=24.81 Aligned_cols=16 Identities=38% Similarity=0.403 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
...+|||+=|||-|.+
T Consensus 39 ~~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 39 GLVTLVLEEDGTVVDT 54 (78)
T ss_pred CCcEEEEeCCCCEEcc
Confidence 4689999999999975
No 206
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=35.64 E-value=23 Score=30.63 Aligned_cols=16 Identities=25% Similarity=0.426 Sum_probs=11.8
Q ss_pred ceEEEEeCCCcccccc
Q 022266 94 KLTVVLDLDETLVCAY 109 (300)
Q Consensus 94 k~tLVLDLDeTLV~s~ 109 (300)
|..|.+|+||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4559999999999753
No 207
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=35.63 E-value=3.1 Score=38.20 Aligned_cols=36 Identities=6% Similarity=-0.055 Sum_probs=23.8
Q ss_pred cccccccCCCCCCCcEEEEEcCc-cccccCCCCCccc
Q 022266 211 EHVKDLSCLSKDLCRTLIVDNNP-FSFLLQPLNGIPC 246 (300)
Q Consensus 211 ~~~KdL~~L~rdl~~~ViVDDs~-~~~~~~p~NgI~I 246 (300)
.+.+-++.++.+++++++|.|+. .-...-..+|+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 220 (257)
T TIGR01458 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRG 220 (257)
T ss_pred HHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeE
Confidence 34445566788899999999996 4444444555543
No 208
>PF10281 Ish1: Putative stress-responsive nuclear envelope protein; InterPro: IPR018803 This group of proteins, found primarily in fungi, consists of putative stress-responsive nuclear envelope protein Ish1 and homologues [].
Probab=35.28 E-value=18 Score=23.31 Aligned_cols=15 Identities=27% Similarity=0.873 Sum_probs=12.4
Q ss_pred CCHHHHHhcCCCCCC
Q 022266 285 HMPEWFQKQGIPTSG 299 (300)
Q Consensus 285 ~l~~~~~~~~~~~~~ 299 (300)
.|.+|++.|||+.+.
T Consensus 8 ~L~~wL~~~gi~~~~ 22 (38)
T PF10281_consen 8 DLKSWLKSHGIPVPK 22 (38)
T ss_pred HHHHHHHHcCCCCCC
Confidence 467899999999763
No 209
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=33.25 E-value=75 Score=24.02 Aligned_cols=16 Identities=38% Similarity=0.461 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
...+|||+=|||.|..
T Consensus 37 ~~~~l~L~eDGT~Vdd 52 (74)
T smart00266 37 SPVTLVLEEDGTIVDD 52 (74)
T ss_pred CCcEEEEecCCcEEcc
Confidence 4688999999999974
No 210
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=31.96 E-value=82 Score=24.03 Aligned_cols=17 Identities=35% Similarity=0.276 Sum_probs=14.5
Q ss_pred CCceEEEEeCCCccccc
Q 022266 92 LQKLTVVLDLDETLVCA 108 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s 108 (300)
....+|||+-|||.|..
T Consensus 38 ~~~~~lvL~eDGTeVdd 54 (78)
T cd01615 38 SAPVTLVLEEDGTEVDD 54 (78)
T ss_pred CCCeEEEEeCCCcEEcc
Confidence 36788999999999964
No 211
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=31.82 E-value=72 Score=24.41 Aligned_cols=15 Identities=40% Similarity=0.251 Sum_probs=13.3
Q ss_pred ceEEEEeCCCccccc
Q 022266 94 KLTVVLDLDETLVCA 108 (300)
Q Consensus 94 k~tLVLDLDeTLV~s 108 (300)
..+|||+-|||.|..
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 488999999999964
No 212
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=31.30 E-value=83 Score=24.13 Aligned_cols=16 Identities=38% Similarity=0.416 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 022266 93 QKLTVVLDLDETLVCA 108 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s 108 (300)
...+|||+-|||.|..
T Consensus 41 ~~~~lvL~eDGT~Vdd 56 (80)
T cd06536 41 APITLVLAEDGTIVED 56 (80)
T ss_pred CceEEEEecCCcEEcc
Confidence 4689999999999974
No 213
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=30.29 E-value=24 Score=32.90 Aligned_cols=12 Identities=50% Similarity=0.667 Sum_probs=10.5
Q ss_pred eEEEEeCCCccc
Q 022266 95 LTVVLDLDETLV 106 (300)
Q Consensus 95 ~tLVLDLDeTLV 106 (300)
...|.|||||||
T Consensus 3 ~VfvWDlDETlI 14 (274)
T TIGR01658 3 NVYVWDMDETLI 14 (274)
T ss_pred eeEEEeccchHH
Confidence 467999999999
No 214
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=27.55 E-value=2.3e+02 Score=24.02 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=10.9
Q ss_pred EEEeCCCcccccc
Q 022266 97 VVLDLDETLVCAY 109 (300)
Q Consensus 97 LVLDLDeTLV~s~ 109 (300)
-||||||.|++-.
T Consensus 46 AildL~G~~l~l~ 58 (138)
T PF04312_consen 46 AILDLDGELLDLK 58 (138)
T ss_pred EEEecCCcEEEEE
Confidence 3899999999854
No 215
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=27.28 E-value=54 Score=31.72 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=31.4
Q ss_pred EEEEeCc-cHHHHHHHhhh------cceEEEEcCCchhhHHHHHHHh
Q 022266 150 VTVFERP-GLREFLKQLSE------FADLILFTAGLEGYARPLVDRI 189 (300)
Q Consensus 150 ~~v~~RP-gl~eFL~~l~~------~yevvI~Ta~~~~YA~~vl~~L 189 (300)
+.++.|| ++...|+.|.+ .++|+|+-.|...-+..+++..
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 3467999 79999999986 3889999999877666666554
No 216
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=26.26 E-value=99 Score=31.77 Aligned_cols=17 Identities=12% Similarity=0.348 Sum_probs=14.1
Q ss_pred CceEEEEeCCCcccccc
Q 022266 93 QKLTVVLDLDETLVCAY 109 (300)
Q Consensus 93 ~k~tLVLDLDeTLV~s~ 109 (300)
...++|.|+||||+.|.
T Consensus 49 ~~~t~v~d~~g~Ll~s~ 65 (525)
T PLN02588 49 SNHTLIFNVEGALLKSN 65 (525)
T ss_pred ccceEEEecccceeccC
Confidence 35579999999999863
No 217
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=26.14 E-value=1.2e+02 Score=27.52 Aligned_cols=95 Identities=16% Similarity=0.274 Sum_probs=63.2
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCC--ceeEE-EecCCccccC--------C-C---cccccc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLR-LYRPSTTSTE--------Y-R---EHVKDL 216 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~--~f~~~-l~r~~c~~~~--------~-~---~~~KdL 216 (300)
.+-||+.|+-..|.+. ..|++-|-|-...+++|.+.|+... .+... ++..+-.+.. + + .-++-|
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 4789999999999986 9999999999999999999998653 44322 2222211110 0 1 223344
Q ss_pred cCCCCCCCcEEEEEcCccccccCCCCCccccCC
Q 022266 217 SCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPF 249 (300)
Q Consensus 217 ~~L~rdl~~~ViVDDs~~~~~~~p~NgI~I~~f 249 (300)
++ +++-+.+++|-|-..-...-|. |+.-..|
T Consensus 168 rk-~~~~~~~~mvGDGatDlea~~p-a~afi~~ 198 (227)
T KOG1615|consen 168 RK-NYNYKTIVMVGDGATDLEAMPP-ADAFIGF 198 (227)
T ss_pred Hh-CCChheeEEecCCccccccCCc-hhhhhcc
Confidence 44 7888889999988776654443 4433334
No 218
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=25.70 E-value=1.5e+02 Score=25.36 Aligned_cols=37 Identities=27% Similarity=0.446 Sum_probs=22.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCC
Q 022266 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (300)
Q Consensus 154 ~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~ 192 (300)
.|-.+.+||+.+... -.|++|-|+.+.. .++..++..
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~ 90 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLD 90 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCC
Confidence 677788888888876 5699999997655 456666553
No 219
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=25.37 E-value=89 Score=33.40 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=54.0
Q ss_pred EeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHhcCCCceeEEEecCCccccCCCcccccccCCCCCCCcEEEEEc
Q 022266 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (300)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~LDp~~~f~~~l~r~~c~~~~~~~~~KdL~~L~rdl~~~ViVDD 231 (300)
..||++.+.+++|.+. +++++.|...+..|+.+.+.++...++ .+...+....++.|+. .+++++|-|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~-------~~~p~~K~~~v~~l~~----~~~v~mvGD 636 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA-------GLLPEDKVKAVTELNQ----HAPLAMVGD 636 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec-------CCCHHHHHHHHHHHhc----CCCEEEEEC
Confidence 3999999999999986 999999999999999999999875221 1221111245566542 257999998
Q ss_pred Ccccc
Q 022266 232 NPFSF 236 (300)
Q Consensus 232 s~~~~ 236 (300)
...-.
T Consensus 637 giNDa 641 (741)
T PRK11033 637 GINDA 641 (741)
T ss_pred CHHhH
Confidence 76654
No 220
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=25.00 E-value=1e+02 Score=30.99 Aligned_cols=52 Identities=19% Similarity=0.377 Sum_probs=38.4
Q ss_pred eEEEEeCccHHHHHHHhhhc-ceEEEEcCCchhhHHHHHHHh-cC------C--CceeEEEe
Q 022266 149 HVTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DG------E--NLFSLRLY 200 (300)
Q Consensus 149 ~~~v~~RPgl~eFL~~l~~~-yevvI~Ta~~~~YA~~vl~~L-Dp------~--~~f~~~l~ 200 (300)
.-|+.+-|.+..+|+.+++. -.+.+-|+|.-.|++.+++.+ ++ + .+|+.++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 34677899999999999998 489999999999999999987 33 1 35766654
No 221
>COG5404 SulA SOS-response cell division inhibitor, blocks FtsZ ring formation [Cell division and chromosome partitioning]
Probab=23.31 E-value=61 Score=27.68 Aligned_cols=48 Identities=44% Similarity=0.637 Sum_probs=30.4
Q ss_pred ccC--CCCCCCCcHHHHHHHHHHHHhcccCCCchHHH--hhcCCC-HHHHHhcCCCC
Q 022266 246 CIP--FSAGQPHDNQLLNVLLPLLKHLSLQKDVRPEL--YERFHM-PEWFQKQGIPT 297 (300)
Q Consensus 246 I~~--f~~g~~~D~~Ll~~l~~~L~~L~~~~DVR~~L--~~~f~l-~~~~~~~~~~~ 297 (300)
|.+ |..|.|--..+| |+|+|..|+++ -|-.+ -..-++ +||++..|.|.
T Consensus 34 ~se~vysE~qP~~~q~L--LlPlLrqLs~q--sRWllwltPqqkLsreWl~~sGLp~ 86 (169)
T COG5404 34 ISEVVYSEDQPMMTQLL--LLPLLQQLSQQ--SRWLLWLTPQQKLSREWLQASGLPL 86 (169)
T ss_pred ccchhccCCCchHHHHH--HHHHHHHHHHh--hhHHhhhCCHHHHHHHHHHHcCCCH
Confidence 444 433555444444 89999999987 34333 233344 59999999885
No 222
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=22.52 E-value=1.2e+02 Score=27.55 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=12.9
Q ss_pred CCceEEEEeCCCccccc
Q 022266 92 LQKLTVVLDLDETLVCA 108 (300)
Q Consensus 92 ~~k~tLVLDLDeTLV~s 108 (300)
..+.++.+|.||||--+
T Consensus 9 ~~~~l~lfdvdgtLt~~ 25 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPP 25 (252)
T ss_pred CCceEEEEecCCccccc
Confidence 34566778999999864
No 223
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=21.24 E-value=1.3e+02 Score=27.65 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=48.6
Q ss_pred eCccHHHHHHHhh-hcceEEEEcCCchhhHHHHHHHhcCCC-------ceeE----------EEecCCccccCCCccccc
Q 022266 154 ERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGEN-------LFSL----------RLYRPSTTSTEYREHVKD 215 (300)
Q Consensus 154 ~RPgl~eFL~~l~-~~yevvI~Ta~~~~YA~~vl~~LDp~~-------~f~~----------~l~r~~c~~~~~~~~~Kd 215 (300)
-=||..|-|+.|. ++-.|-.-|+++++--+.+.++|..-+ .|.- .-+|....-. ..-..|
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~--d~a~~d 101 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVD--DDALED 101 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEc--ccchhh
Confidence 3488888888888 667888888888777777777664321 1100 0011110000 011223
Q ss_pred ccCCCCCCCcEEEEEcCccccccCC
Q 022266 216 LSCLSKDLCRTLIVDNNPFSFLLQP 240 (300)
Q Consensus 216 L~~L~rdl~~~ViVDDs~~~~~~~p 240 (300)
..-+..+--|+|+|-+.|..|..+.
T Consensus 102 F~gidTs~pn~VViglape~F~y~~ 126 (262)
T KOG3040|consen 102 FDGIDTSDPNCVVIGLAPEGFSYQR 126 (262)
T ss_pred CCCccCCCCCeEEEecCcccccHHH
Confidence 4444455678888888888876543
Done!