Query 022267
Match_columns 300
No_of_seqs 240 out of 1597
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:39:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhi_A Cathepsin B-like cystei 100.0 6.6E-66 2.3E-70 467.2 14.7 261 33-300 5-278 (325)
2 3qj3_A Cathepsin L-like protei 100.0 2.3E-61 7.9E-66 438.4 21.2 251 21-300 28-296 (331)
3 3pbh_A Procathepsin B; thiol p 100.0 3.7E-61 1.3E-65 435.2 20.6 258 35-300 7-280 (317)
4 3qt4_A Cathepsin-L-like midgut 100.0 3.8E-61 1.3E-65 436.0 20.3 250 21-300 33-294 (329)
5 1cs8_A Human procathepsin L; p 100.0 1.5E-60 5E-65 431.1 20.7 251 21-300 18-281 (316)
6 1by8_A Protein (procathepsin K 100.0 1.6E-60 5.4E-65 430.6 19.9 251 21-300 17-279 (314)
7 2c0y_A Procathepsin S; proenzy 100.0 1.7E-60 5.7E-65 430.6 18.4 250 22-300 19-280 (315)
8 2o6x_A Procathepsin L1, secret 100.0 1.6E-60 5.4E-65 429.9 18.0 249 22-300 12-271 (310)
9 1pci_A Procaricain; zymogen, h 100.0 7.7E-60 2.6E-64 427.2 21.6 249 21-300 28-283 (322)
10 3tnx_A Papain; hydrolase, cyto 100.0 1.5E-58 5E-63 422.4 23.0 245 21-300 72-324 (363)
11 3pdf_A Cathepsin C, dipeptidyl 100.0 1.9E-57 6.6E-62 425.2 18.4 246 29-300 135-401 (441)
12 1xkg_A DER P I, major mite fec 100.0 2.7E-57 9.4E-62 408.3 12.9 240 21-300 14-268 (312)
13 3cbj_A Cathepsin B; cathepsin 100.0 1.8E-53 6.1E-58 377.1 16.3 203 96-300 5-223 (266)
14 3qsd_A Cathepsin B-like peptid 100.0 1.5E-52 5E-57 368.9 17.2 201 97-300 2-219 (254)
15 2xu3_A Cathepsin L1; hydrolase 100.0 1.4E-50 4.8E-55 349.1 18.1 178 98-300 1-185 (220)
16 3kwz_A Cathepsin K; enzyme inh 100.0 1.4E-50 4.8E-55 348.0 17.2 175 98-300 1-180 (215)
17 3i06_A Cruzipain; autocatalyti 100.0 4.1E-50 1.4E-54 344.9 18.9 176 98-300 1-180 (215)
18 1m6d_A Cathepsin F, catsf; pap 100.0 1.8E-50 6E-55 347.0 15.8 174 98-300 1-179 (214)
19 3ovx_A Cathepsin S; hydrolase, 100.0 3.3E-50 1.1E-54 346.4 16.3 177 98-300 2-183 (218)
20 1ppo_A Protease omega; hydrola 100.0 4.4E-50 1.5E-54 344.8 16.7 174 98-300 1-177 (216)
21 2b1m_A SPE31; papain-like, sug 100.0 6.8E-50 2.3E-54 349.8 17.9 175 97-300 1-186 (246)
22 1cqd_A Protein (protease II); 100.0 4.6E-50 1.6E-54 345.9 16.3 174 97-300 2-179 (221)
23 8pch_A Cathepsin H; hydrolase, 100.0 3.2E-50 1.1E-54 347.0 15.2 177 98-300 1-184 (220)
24 1iwd_A Ervatamin B; cysteine p 100.0 7.6E-50 2.6E-54 343.0 17.1 172 98-300 1-176 (215)
25 1yal_A Chymopapain; hydrolase, 100.0 8.1E-50 2.8E-54 343.7 16.0 174 98-300 1-177 (218)
26 3p5u_A Actinidin; SAD, cystein 100.0 9.8E-50 3.4E-54 343.8 16.0 176 98-300 1-180 (220)
27 2fo5_A Cysteine proteinase EP- 100.0 2.3E-49 7.9E-54 348.6 16.8 180 96-300 2-186 (262)
28 3u8e_A Papain-like cysteine pr 100.0 8.8E-50 3E-54 344.5 13.7 173 98-300 1-181 (222)
29 1s4v_A Cysteine endopeptidase; 100.0 3.1E-49 1.1E-53 342.4 17.1 176 97-300 1-181 (229)
30 3f5v_A DER P 1 allergen; aller 100.0 2.4E-49 8.3E-54 341.9 13.9 175 96-300 8-188 (222)
31 2cio_A Papain; hydrolase/inhib 100.0 1.8E-48 6.1E-53 333.9 18.5 170 98-300 1-173 (212)
32 1o0e_A Ervatamin C; plant cyst 100.0 1.9E-48 6.5E-53 332.7 18.0 167 98-300 1-171 (208)
33 2oul_A Falcipain 2; cysteine p 100.0 7.3E-49 2.5E-53 342.5 15.3 174 96-300 16-202 (241)
34 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.1E-48 3.6E-53 335.7 15.9 171 98-300 1-173 (213)
35 2bdz_A Mexicain; cysteine prot 100.0 2.5E-48 8.6E-53 333.3 18.1 170 98-300 1-173 (214)
36 3bwk_A Cysteine protease falci 100.0 1.1E-48 3.8E-53 341.8 14.9 174 96-300 18-204 (243)
37 3f75_A Toxopain-2, cathepsin L 100.0 1.1E-48 3.8E-53 338.3 12.5 177 96-300 5-187 (224)
38 1deu_A Procathepsin X; cystein 100.0 4.9E-48 1.7E-52 343.5 16.9 190 95-300 33-233 (277)
39 3ois_A Cysteine protease; alph 100.0 6.8E-46 2.3E-50 332.4 8.7 228 53-300 13-253 (291)
40 2wbf_X Serine-repeat antigen p 100.0 1.7E-41 5.9E-46 300.3 15.6 194 100-300 9-223 (265)
41 2cb5_A Protein (bleomycin hydr 100.0 7.1E-32 2.4E-36 251.0 14.4 93 97-193 47-168 (453)
42 2e01_A Cysteine proteinase 1; 100.0 4.1E-31 1.4E-35 246.1 14.4 91 97-191 52-169 (457)
43 3pw3_A Aminopeptidase C; bleom 99.9 3.8E-26 1.3E-30 208.3 10.6 77 114-190 22-108 (383)
44 3f75_P Toxopain-2, cathepsin L 98.6 1.7E-08 5.8E-13 75.5 3.5 53 23-77 33-89 (106)
45 2l95_A Crammer, LP06209P; cyst 98.5 4.4E-08 1.5E-12 69.8 2.7 55 22-78 17-77 (80)
46 1pxv_A Cysteine protease; hydr 96.8 0.0089 3E-07 47.9 9.5 110 119-297 26-145 (183)
47 1cv8_A Staphopain; cysteine pr 96.6 0.055 1.9E-06 43.2 12.6 112 119-298 17-137 (174)
48 1x9y_A Cysteine proteinase; ha 96.5 0.026 8.7E-07 50.0 11.0 112 118-297 201-321 (367)
49 3erv_A Putative C39-like pepti 83.1 1.3 4.5E-05 37.4 4.6 49 237-289 130-186 (236)
50 3suj_A Cerato-platanin 1; doub 22.6 14 0.00046 27.9 -0.7 10 119-128 56-65 (127)
51 3m3g_A EPL1 protein; fungal, p 20.4 15 0.00051 27.4 -0.9 18 112-129 47-66 (120)
52 1th5_A NIFU1; iron-sulfur clus 20.2 37 0.0013 22.9 1.2 26 114-141 37-62 (74)
No 1
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=6.6e-66 Score=467.18 Aligned_cols=261 Identities=42% Similarity=0.861 Sum_probs=174.4
Q ss_pred cccccChHHHHHHHHcCCCCceEEecCCCCCCCCHHHHHHhhCCCCCCCC--CCCCCCccccCCCCCCCCccccCCCCCC
Q 022267 33 LDSHILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKG--LLLGVPVKTHDKSLKLPKSFDARSAWPQ 110 (300)
Q Consensus 33 ~~~~i~~~~~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~~~~~~~~~~~--~~~~~~~~~~~~~~~lP~~~D~R~~w~~ 110 (300)
....++.+++|++||++++.+|++++|++|+|||.+||++++|..+.+.. .....+....+...+||++||||++|++
T Consensus 5 ~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~w~~ 84 (325)
T 3hhi_A 5 EDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPN 84 (325)
T ss_dssp ---------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHHHSTT
T ss_pred cccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHhCCCCCCcccccccCccccccccccCCCCcEehhHhcCC
Confidence 34567888999999997678999999867999999999998876543322 1111111111123579999999999999
Q ss_pred CCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCC-CcccCHHHHHHhcCCCCCCCCCCCChHHHHHHHHHcCccCCCCc
Q 022267 111 CSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGM-NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD 189 (300)
Q Consensus 111 ~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~-~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~G~~~e~~y 189 (300)
||.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+. ..+.||+||++..||+|++++|+++|++|
T Consensus 85 ~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~-~~~~GC~GG~~~~A~~yi~~~Gi~~e~~y 163 (325)
T 3hhi_A 85 CPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCS-DCGDGCNGGDPDRAWAYFSSTGLVSDYCQ 163 (325)
T ss_dssp CTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCG-GGBCTTBCBCHHHHHHHHHHTCBCBTTTS
T ss_pred CCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHhCCCccccc
Confidence 99999999999999999999999999999999997 99999999999986 34689999999999999999999999999
Q ss_pred CCC-CCCCCCC--------CCCC-CCCCCccccccccccccccccceeeEeeeEEeCCCHHHHHHHHHHcCCEEEEEEec
Q 022267 190 PYF-DSTGCSH--------PGCE-PAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVY 259 (300)
Q Consensus 190 PY~-~~~~c~~--------~~~~-~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~GPV~v~i~~~ 259 (300)
||. +. |.+ +.|. +...++.|...|.... +...+.+.+..|.+ .++++||++|+++|||+|+|+++
T Consensus 164 PY~~~~--c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~--~~~~~~~~~~~y~v-~~~~~i~~~i~~~GPV~v~i~~~ 238 (325)
T 3hhi_A 164 PYPFPH--CSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPT--IPVVNYRSWTSYAL-QGEDDYMRELFFRGPFEVAFDVY 238 (325)
T ss_dssp CCSSCC--CBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTT--SCCCCBCEEEEEEE-CSHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCcccc--ccccccccccCCCCCCcccCCcchhhcccccc--cccceEEeecceEe-CCHHHHHHHHHHCCCEEEEEEec
Confidence 996 43 433 3444 2344667777776332 33345566788887 88999999999999999999998
Q ss_pred cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 260 EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 260 ~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|++|++|||.++++...++|||+||||| +++|++||||
T Consensus 239 ~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG-~~~g~~YWiv 278 (325)
T 3hhi_A 239 EDFIAYNSGVYHHVSGQYLGGHAVRLVGWG-TSNGVPYWKI 278 (325)
T ss_dssp HHHHTCCSSEECCCSCCEEEEEEEEEEEEE-EETTEEEEEE
T ss_pred cccccccCceecCCCCCCCCCEEEEEEEEE-ecCCceEEEE
Confidence 899999999999888776779999999999 8899999997
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2.3e-61 Score=438.44 Aligned_cols=251 Identities=28% Similarity=0.514 Sum_probs=203.3
Q ss_pred hcccccc-hhhhccccccChHH--HHHHHHcC---CCCceEEecCCCCCCCCHHHHHHhh-CCCCCCCCCCCCCCcccc-
Q 022267 21 QTFAEGV-VSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKHLL-GVKPTPKGLLLGVPVKTH- 92 (300)
Q Consensus 21 ~~~~~~~-~~~~~~~~~i~~~~--~i~~~N~~---~~~~~~~~~n~~fsd~t~~Ef~~~~-~~~~~~~~~~~~~~~~~~- 92 (300)
.+.+.|. ..|...|+.||.++ +|++||++ .+.+|++++| +|+|||.+||++++ +.................
T Consensus 28 ~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~ 106 (331)
T 3qj3_A 28 TYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVN-LFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTRE 106 (331)
T ss_dssp HTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCS-TTTTCCHHHHHHHHSCCCCCSSTTTTCEEECSGG
T ss_pred HhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeeccc-ccccCCHHHHHHHhccccccccccccCccccccc
Confidence 3455554 46778899999996 59999985 4689999999 99999999999854 444322111111111111
Q ss_pred ----CCCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCC--CcccCHHHHHHhcCCCCCCCC
Q 022267 93 ----DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGM--NLSLSVNDLLACCGFLCGDGC 166 (300)
Q Consensus 93 ----~~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~--~~~lS~q~l~dC~~~~~~~gC 166 (300)
....+||++||||++ |+|+||||||.||||||||++++||++++++++. .+.||+|+|+||+.. +.||
T Consensus 107 ~~~~~~~~~lP~s~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~--~~GC 180 (331)
T 3qj3_A 107 DLGLNASVRYPASFDWRDQ----GMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN--ALGC 180 (331)
T ss_dssp GGTCCSSCCCCSSEEGGGG----TCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT--SCGG
T ss_pred ccccccccCCCcceecccC----CccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC--CCCC
Confidence 123579999999998 7899999999999999999999999999999998 999999999999972 6899
Q ss_pred CCCChHHHHHHHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHH
Q 022267 167 DGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIM 243 (300)
Q Consensus 167 ~GG~~~~a~~~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik 243 (300)
+||++..||+|++++ |+++|++|||.+.+ ..|..... ...+++.+|. +. .++++||
T Consensus 181 ~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~e~~lk 239 (331)
T 3qj3_A 181 SGGWMNDAFTYVAQNGGIDSEGAYPYEMAD-----------------GNCHYDPN----QVAARLSGYVYLSGPDENMLA 239 (331)
T ss_dssp GCCCHHHHHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCTT----SEEECCSEEEEESSCCHHHHH
T ss_pred CCCCHHHHHHHHHHcCCcCcccccCccCCC-----------------CCCCCCcc----cceeEeeEEEEeCCCCHHHHH
Confidence 999999999999998 99999999996542 23332221 3445677887 65 4899999
Q ss_pred HHHHHcCCEEEEEEeccccccCCCCeEeccCCC-CCCCcEEEEEEecCCCCCcCceec
Q 022267 244 AEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD-VMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 244 ~~l~~~GPV~v~i~~~~~f~~Y~~Giy~~~~~~-~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|+++|||+|+|+++.+|++|++|||..+.|. ..++|||+||||| +++|++||||
T Consensus 240 ~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWiv 296 (331)
T 3qj3_A 240 DMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYG-NENGQDYWLV 296 (331)
T ss_dssp HHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEE-EETTEEEEEE
T ss_pred HHHHhCCCEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEe-ccCCceEEEE
Confidence 999999999999999877999999999987663 5689999999999 8889999997
No 3
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.7e-61 Score=435.24 Aligned_cols=258 Identities=48% Similarity=0.979 Sum_probs=210.1
Q ss_pred cccChHHHHHHHHcCCCCceEEecCCCCCCCCHHHHHHhhCCCCCCCCCCCCCCccccCCCCCCCCccccCCCCCCCCCC
Q 022267 35 SHILQDSIIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTI 114 (300)
Q Consensus 35 ~~i~~~~~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D~R~~w~~~~~v 114 (300)
+.++.+++|++||+ .+.+|++++| |+|+|.||++.++|.++.+..... +. ......+||++||||++|++|+.|
T Consensus 7 ~~~~~~~~i~~~N~-~~~~~~~~~n--f~~~~~e~~~~~lg~~~~~~~~~~--~~-~~~~~~~lP~s~DwR~~~~~c~~v 80 (317)
T 3pbh_A 7 FHPLSDELVNYVNK-RNTTWQAGHN--FYNVDMSYLKRLCGTFLGGPKPPQ--RV-MFTEDLKLPASFDAREQWPQCPTI 80 (317)
T ss_dssp CCSSCHHHHHHHHH-HTCSEEECCC--CSSCCHHHHHHTCCBCTTCCCCSE--EE-CCCSCCCCCSSEEHHHHCTTCGGG
T ss_pred cCcccHHHHHHHHC-CCCCeEEeec--cccCCHHHHHHHcCCCCCccccCc--cc-ccccccCCCCCEechhccCCCCCc
Confidence 35678899999997 4789999998 999999999999987654332111 11 112235799999999999999999
Q ss_pred CcccCCCCCccHHHHHHHHHHHHHHHHHhCC--CcccCHHHHHHhcCCCCCCCCCCCChHHHHHHHHHcCccCCCCc---
Q 022267 115 SRILDQGHCGSCWAFGAVEALSDRFCIHFGM--NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD--- 189 (300)
Q Consensus 115 ~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~--~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~G~~~e~~y--- 189 (300)
+||||||.||||||||++++||++++|+++. .+.||+|+|+||+....+.||+||++..||+|++++|+++|++|
T Consensus 81 tpVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~ 160 (317)
T 3pbh_A 81 KEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESH 160 (317)
T ss_dssp TCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCC
T ss_pred CCccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCC
Confidence 9999999999999999999999999999873 89999999999986334689999999999999999999999888
Q ss_pred ----CCCCCCCC------CCCCCCCCCCCccccccccccccc-cccceeeEeeeEEeCCCHHHHHHHHHHcCCEEEEEEe
Q 022267 190 ----PYFDSTGC------SHPGCEPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTV 258 (300)
Q Consensus 190 ----PY~~~~~c------~~~~~~~~~~~~~c~~~C~~~~~~-~~~~~~~~i~~~~~~~~~~~ik~~l~~~GPV~v~i~~ 258 (300)
||... .| ..+.|.....++.|...|...... +...+.+....|.++.++++||++|+++|||+|+|++
T Consensus 161 ~~c~PY~~~-~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~ 239 (317)
T 3pbh_A 161 VGCRPYSIP-PCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSV 239 (317)
T ss_dssp CBSSCCCSC-CCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCcccC-cccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEe
Confidence 99642 12 224454434567777777653321 2333444445566778999999999999999999999
Q ss_pred ccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 259 YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 259 ~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+++|++|++|||.++++...++|||+||||| +++|++||||
T Consensus 240 ~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG-~~~g~~YWiv 280 (317)
T 3pbh_A 240 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWG-VENGTPYWLV 280 (317)
T ss_dssp EGGGGGEEEEEECCCSCCEEEEEEEEEEEEE-EETTEEEEEE
T ss_pred cccccCCCCcEEccCCCCCCCCEEEEEEEEE-EeCCeeEEEE
Confidence 9999999999999887776779999999999 7899999997
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.8e-61 Score=436.01 Aligned_cols=250 Identities=26% Similarity=0.465 Sum_probs=201.6
Q ss_pred hcccccch-hhhccccccChHH--HHHHHHcC---CCCceEEecCCCCCCCCHHHHHHhhCCCCCCCCCCC---CCCccc
Q 022267 21 QTFAEGVV-SKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLL---GVPVKT 91 (300)
Q Consensus 21 ~~~~~~~~-~~~~~~~~i~~~~--~i~~~N~~---~~~~~~~~~n~~fsd~t~~Ef~~~~~~~~~~~~~~~---~~~~~~ 91 (300)
.+.+.|.. .|...|+.||.++ +|++||++ .+.+|++++| +|+|||.+||++++|.++....... .....
T Consensus 33 ~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlt~eEf~~~~g~~~~~~~~~~~~~~~~~~- 110 (329)
T 3qt4_A 33 THKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMN-QFGDMSKEEFLAYVNRGKAQKPKHPENLRMPYV- 110 (329)
T ss_dssp HTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCC-GGGGCCHHHHHHHHHHTCCC------CCEEECC-
T ss_pred HhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEecc-ccccCCHHHHHHhcCCccccccccccccccccc-
Confidence 34555554 6777899999995 69999984 4689999999 9999999999997765432111100 01111
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCCh
Q 022267 92 HDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYP 171 (300)
Q Consensus 92 ~~~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~ 171 (300)
.+ ..+||++||||++ +|+||||||.||||||||++++||++++++++..+.||+|+|+||+....+.||+||++
T Consensus 111 ~~-~~~lP~~~DwR~~-----~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~~ 184 (329)
T 3qt4_A 111 SS-KKPLAASVDWRSN-----AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGWM 184 (329)
T ss_dssp CC-CSCCCSCEECTTT-----SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCCH
T ss_pred CC-ccCCCCCEEcccc-----ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCCCCCCCCCh
Confidence 11 2479999999985 49999999999999999999999999999999999999999999986334679999999
Q ss_pred HHHHHHHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHc
Q 022267 172 ISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKN 249 (300)
Q Consensus 172 ~~a~~~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~ 249 (300)
..||+|++++|+++|++|||.+.+ ..|..... ...+++.+|. ++ .++++||++|+++
T Consensus 185 ~~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~e~~lk~al~~~ 243 (329)
T 3qt4_A 185 DSAFSYIHDYGIMSESAYPYEAQG-----------------DYCRFDSS----QSVTTLSGYYDLPSGDENSLADAVGQA 243 (329)
T ss_dssp HHHHHHHHHSCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSEEEECCTTCHHHHHHHHHHT
T ss_pred hHHHHHHHHcCCCcHHHeeeecCC-----------------CCCCCCcc----cceEEeceEEEecCCCHHHHHHHHHhC
Confidence 999999999999999999996542 12332211 2345677777 65 5899999999999
Q ss_pred CCEEEEEEeccccccCCCCeEeccCCC-CCCCcEEEEEEecCCCCCcCceec
Q 022267 250 GPVEVSFTVYEDFAHYKSGVYKHITGD-VMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 250 GPV~v~i~~~~~f~~Y~~Giy~~~~~~-~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|||+|+|+++.+|++|++|||..+.|. ..++|||+||||| +++|++||||
T Consensus 244 GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWiv 294 (329)
T 3qt4_A 244 GPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYG-SDNGQDYWIL 294 (329)
T ss_dssp CCEEEEECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEE-EETTEEEEEE
T ss_pred CCEEEEEecChhhhhccCceeecCCCCCCcCCEEEEEEEEE-eeCCccEEEE
Confidence 999999999889999999999987664 5689999999999 7889999997
No 5
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=1.5e-60 Score=431.14 Aligned_cols=251 Identities=25% Similarity=0.457 Sum_probs=202.1
Q ss_pred hcccccchhhhccccccChHH--HHHHHHcC---CCCceEEecCCCCCCCCHHHHHH-hhCCCCCCCCCCCCCCccccCC
Q 022267 21 QTFAEGVVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLLGVPVKTHDK 94 (300)
Q Consensus 21 ~~~~~~~~~~~~~~~~i~~~~--~i~~~N~~---~~~~~~~~~n~~fsd~t~~Ef~~-~~~~~~~~~~~~~~~~~~~~~~ 94 (300)
.+.+.++..|...|+.||.++ +|++||++ .+.+|++++| +|+|||.+||++ +++..+.... . .... ..+.
T Consensus 18 ~~~k~Y~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~F~Dlt~eEf~~~~~g~~~~~~~-~-~~~~-~~~~ 93 (316)
T 1cs8_A 18 MHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN-AFGDMTSEEFRQVMNGFQNRKPR-K-GKVF-QEPL 93 (316)
T ss_dssp HTTCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCC-TTTTCCHHHHHHHHCCBCCCCCS-C-CEEC-CCCT
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccC-ccCCCCHHHHHHHhcCCCCCccc-c-Cccc-cCcc
Confidence 445666667888899999985 69999974 2579999999 999999999987 4444332211 1 0111 1122
Q ss_pred CCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHH
Q 022267 95 SLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISA 174 (300)
Q Consensus 95 ~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a 174 (300)
..+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+...++.||+||++..|
T Consensus 94 ~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~a 169 (316)
T 1cs8_A 94 FYEAPRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYA 169 (316)
T ss_dssp TCCCCSCEEGGGG----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHH
T ss_pred ccCCCCcEecCCC----CCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCCHHHH
Confidence 3479999999998 889999999999999999999999999999999999999999999986334689999999999
Q ss_pred HHHHH-HcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCE
Q 022267 175 WRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPV 252 (300)
Q Consensus 175 ~~~~~-~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV 252 (300)
|+|+. +.|+++|++|||.+.. ..|..... ...+++.+|. ++.++++||++|+++|||
T Consensus 170 ~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV 228 (316)
T 1cs8_A 170 FQYVQDNGGLDSEESYPYEATE-----------------ESCKYNPK----YSVANDAGFVDIPKQEKALMKAVATVGPI 228 (316)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCCEEECCSCHHHHHHHHHHHCCE
T ss_pred HHHHHHhCCcCchhccCCCCCC-----------------CCcCCCCc----cceeEeccEEEeCCCHHHHHHHHHhcCCE
Confidence 99997 6799999999996541 13332211 2345677887 666899999999999999
Q ss_pred EEEEEec-cccccCCCCeEeccCC-CCCCCcEEEEEEec---CCCCCcCceec
Q 022267 253 EVSFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWG---TSDDGEDYWVC 300 (300)
Q Consensus 253 ~v~i~~~-~~f~~Y~~Giy~~~~~-~~~~~Hav~iVGyg---~~~~g~~YWiv 300 (300)
+|+|+++ ++|++|++|||.++.| ...++|||+||||| ++++|++||||
T Consensus 229 ~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWiv 281 (316)
T 1cs8_A 229 SVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV 281 (316)
T ss_dssp EEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEE
T ss_pred EEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEE
Confidence 9999997 5899999999998744 44689999999999 55579999997
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.6e-60 Score=430.59 Aligned_cols=251 Identities=25% Similarity=0.437 Sum_probs=199.0
Q ss_pred hccccc-chhhhccccccChHH--HHHHHHcCC---CCceEEecCCCCCCCCHHHHHH-hhCCCCCCCCCCCCCCccccC
Q 022267 21 QTFAEG-VVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLLGVPVKTHD 93 (300)
Q Consensus 21 ~~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~---~~~~~~~~n~~fsd~t~~Ef~~-~~~~~~~~~~~~~~~~~~~~~ 93 (300)
.+.+.+ +..|...|+.||.++ +|++||++. +.+|++++| +|+|||.+||++ ++|..+...............
T Consensus 17 ~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~~~~~~~~~~~ 95 (314)
T 1by8_A 17 THRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMN-HLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPE 95 (314)
T ss_dssp HTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCC-TTSSSCHHHHHHHSCCCCCCSCCCCSSSSSBCCC
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEccc-ccccCCHHHHHHHhccCCCCcccccCCccccccc
Confidence 345555 457888899999985 699999753 478999999 999999999976 555543222111101111111
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHH
Q 022267 94 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPIS 173 (300)
Q Consensus 94 ~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~ 173 (300)
....||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..
T Consensus 96 ~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~~gC~GG~~~~ 169 (314)
T 1by8_A 96 WEGRAPDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTN 169 (314)
T ss_dssp CSSCCCSCCBSTTT----TCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--TSCGGGCCCSHH
T ss_pred cccCCCCeEeCCCC----CCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCcCCCHHH
Confidence 11239999999998 889999999999999999999999999999999999999999999986 468999999999
Q ss_pred HHHHHH-HcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcC
Q 022267 174 AWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNG 250 (300)
Q Consensus 174 a~~~~~-~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~G 250 (300)
||+|++ +.|+++|++|||.+.. ..|..... ...+++.+|. ++ .++++||++|+++|
T Consensus 170 a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~al~~~G 228 (314)
T 1by8_A 170 AFQYVQKNRGIDSEDAYPYVGQE-----------------ESCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVG 228 (314)
T ss_dssp HHHHHHHTTCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSCEEECCSSCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCcCcHhhCCCCCCC-----------------CCcCCCCc----cceeEECcEEEecCCCHHHHHHHHHHcC
Confidence 999998 4699999999996542 12322111 1234567776 65 58999999999999
Q ss_pred CEEEEEEec-cccccCCCCeEeccCC-CCCCCcEEEEEEecCCCCCcCceec
Q 022267 251 PVEVSFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 251 PV~v~i~~~-~~f~~Y~~Giy~~~~~-~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
||+|+|+++ ++|++|++|||.++.| ...++|||+||||| +++|++||||
T Consensus 229 PV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWiv 279 (314)
T 1by8_A 229 PVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-IQKGNKHWII 279 (314)
T ss_dssp CEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEE-EETTEEEEEE
T ss_pred CEEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEe-ccCCceEEEE
Confidence 999999997 6899999999998744 44689999999999 7789999997
No 7
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.7e-60 Score=430.63 Aligned_cols=250 Identities=23% Similarity=0.439 Sum_probs=199.3
Q ss_pred ccccc-chhhhccccccChHH--HHHHHHcCC---CCceEEecCCCCCCCCHHHHHH-hhCCCCCCCCCCCCCCccccCC
Q 022267 22 TFAEG-VVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLLGVPVKTHDK 94 (300)
Q Consensus 22 ~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~---~~~~~~~~n~~fsd~t~~Ef~~-~~~~~~~~~~~~~~~~~~~~~~ 94 (300)
+.+.+ +..|...|+.||.++ +|++||++. +.+|++++| +|+|||.+||++ ++|..+..... ...... .+.
T Consensus 19 ~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~-~~~~~~-~~~ 95 (315)
T 2c0y_A 19 YGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMN-HLGDMTSEEVMSLMSSLRVPSQWQ-RNITYK-SNP 95 (315)
T ss_dssp HTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCC-GGGGCCHHHHHHHTTSBCCCCGGG-SCBCC-----
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccC-ccccCCHHHHHHHhcCCCCCcccc-CCcccc-Ccc
Confidence 34555 457888899999985 699999752 478999999 999999999976 55544322111 111111 112
Q ss_pred CCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhc-CCCCCCCCCCCChHH
Q 022267 95 SLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACC-GFLCGDGCDGGYPIS 173 (300)
Q Consensus 95 ~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~-~~~~~~gC~GG~~~~ 173 (300)
..+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+ ...++.||+||++..
T Consensus 96 ~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~~~~ 171 (315)
T 2c0y_A 96 NRILPDSVDWREK----GCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTT 171 (315)
T ss_dssp --CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBCHHH
T ss_pred cCCCCCeEecCCC----CCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCCCCHHH
Confidence 3469999999998 88999999999999999999999999999999999999999999998 423478999999999
Q ss_pred HHHHHHH-cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcC
Q 022267 174 AWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNG 250 (300)
Q Consensus 174 a~~~~~~-~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~G 250 (300)
||+|+++ .|+++|++|||.+.. ..|..... ...+++.+|. ++ .++++||++|+++|
T Consensus 172 a~~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~al~~~G 230 (315)
T 2c0y_A 172 AFQYIIDNKGIDSDASYPYKAMD-----------------QKCQYDSK----YRAATCSKYTELPYGREDVLKEAVANKG 230 (315)
T ss_dssp HHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTC
T ss_pred HHHHHHHhCCcCchhcCCCccCC-----------------CCcccCCc----ccccccCCeEEeCCCCHHHHHHHHHHcC
Confidence 9999985 699999999996542 13332211 2345677877 65 58999999999999
Q ss_pred CEEEEEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 251 PVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 251 PV~v~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
||+|+|+++ ++|++|++|||..+.|...++|||+||||| +++|++||||
T Consensus 231 PV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg-~~~g~~yWiv 280 (315)
T 2c0y_A 231 PVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYG-DLNGKEYWLV 280 (315)
T ss_dssp CEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEE-EETTEEEEEE
T ss_pred CEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEe-ecCCCcEEEE
Confidence 999999997 689999999999874544789999999999 7789999997
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=1.6e-60 Score=429.86 Aligned_cols=249 Identities=26% Similarity=0.484 Sum_probs=197.3
Q ss_pred ccccc-chhhhccccccChHH--HHHHHHcCC---CCceEEecCCCCCCCCHHHHHH-hhC-CCCCCCCCCCCCCccccC
Q 022267 22 TFAEG-VVSKLKLDSHILQDS--IIKEVNENP---KAGWKAARNPQFSNYTVGQFKH-LLG-VKPTPKGLLLGVPVKTHD 93 (300)
Q Consensus 22 ~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~---~~~~~~~~n~~fsd~t~~Ef~~-~~~-~~~~~~~~~~~~~~~~~~ 93 (300)
+.+.+ +..|...| .||.++ +|++||++. +.+|++++| +|+|||.+||++ ++| ................ .
T Consensus 12 ~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N-~F~Dlt~eEf~~~~~g~~~~~~~~~~~~~~~~~-~ 88 (310)
T 2o6x_A 12 YNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLN-QFTDMTFEEFKAKYLTEMSRASDILSHGVPYEA-N 88 (310)
T ss_dssp HTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCC-TTTTSCHHHHHHHHCCCCCCGGGGSCSSEECCC--
T ss_pred hCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEecc-ccCCCCHHHHHHHhcCCCCCcccccccCCcccc-c
Confidence 34555 44567778 999985 699999752 578999999 999999999997 555 3321111001001111 1
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHH
Q 022267 94 KSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPIS 173 (300)
Q Consensus 94 ~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~ 173 (300)
..+||++||||++ |+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+....+.||+||++..
T Consensus 89 -~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 163 (310)
T 2o6x_A 89 -NRAVPDKIDWRES----GYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMEN 163 (310)
T ss_dssp ----CCSCEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCHHH
T ss_pred -cCCCCCeEecCcC----CCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCHHH
Confidence 1269999999998 88999999999999999999999999999999999999999999998532368999999999
Q ss_pred HHHHHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCC
Q 022267 174 AWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGP 251 (300)
Q Consensus 174 a~~~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GP 251 (300)
||+|+++.|+++|++|||.+.. ..|..... ...+++.+|. ++ .++++||++|+++||
T Consensus 164 a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~~l~~~GP 222 (310)
T 2o6x_A 164 AYQYLKQFGLETESSYPYTAVE-----------------GQCRYNKQ----LGVAKVTGFYTVHSGSEVELKNLVGAEGP 222 (310)
T ss_dssp HHHHHTTSCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCEEEEEEEEECSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHCCcCchhcCCCCCCC-----------------CCccCCCC----CCceEeCeEEEeCCCCHHHHHHHHHhcCC
Confidence 9999998899999999996541 12332211 2345778887 75 589999999999999
Q ss_pred EEEEEEeccccccCCCCeEeccCC-CCCCCcEEEEEEecCCCCCcCceec
Q 022267 252 VEVSFTVYEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 252 V~v~i~~~~~f~~Y~~Giy~~~~~-~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+|+|+++++|++|++|||.++.| ...++|||+||||| +++|++||||
T Consensus 223 V~v~i~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg-~~~g~~yWiv 271 (310)
T 2o6x_A 223 AAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYG-TQGGTDYWIV 271 (310)
T ss_dssp EEEEECCCHHHHTEEEEEECCSSCCTTCCCEEEEEEEEE-EETTEEEEEE
T ss_pred eEEEEecchhhhhCCCceecCCCCCCCCCCEEEEEEEEe-ccCCceEEEE
Confidence 999999988999999999987644 34689999999999 7789999997
No 9
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=7.7e-60 Score=427.22 Aligned_cols=249 Identities=24% Similarity=0.407 Sum_probs=198.3
Q ss_pred hccccc-chhhhccccccChHH--HHHHHHcCCCCceEEecCCCCCCCCHHHHHHhh-CCCCCCCCCCCCCCccccCCCC
Q 022267 21 QTFAEG-VVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKHLL-GVKPTPKGLLLGVPVKTHDKSL 96 (300)
Q Consensus 21 ~~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~~~-~~~~~~~~~~~~~~~~~~~~~~ 96 (300)
.+.+.+ +..|...|+.||.++ +|++||++ +.+|++++| +|+|||.+||++++ |.....................
T Consensus 28 ~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N-~FaDlt~eEf~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (322)
T 1pci_A 28 NHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLN-EFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIV 105 (322)
T ss_dssp TTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSC-TTTTSCHHHHHHHHCCCBCCCSSCCCCSEECCCCCCC
T ss_pred HcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecC-ccccCCHHHHHHHhcCCCCcccccccccccccccccc
Confidence 445556 567778899999984 69999985 679999999 99999999999854 4433221111111101112234
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHH
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~ 176 (300)
+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+
T Consensus 106 ~lP~~~DwR~~----g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~~ 179 (322)
T 1pci_A 106 NLPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALE 179 (322)
T ss_dssp CSCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGGGCBCHHHHHH
T ss_pred CCCCeEecccC----CCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHH
Confidence 79999999998 889999999999999999999999999999999999999999999985 468999999999999
Q ss_pred HHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEE
Q 022267 177 YFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 177 ~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v 254 (300)
|++++|+++|++|||.+.. ..|..... ....+++.+|. ++ .++++||++|++ |||+|
T Consensus 180 yi~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~---~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v 238 (322)
T 1pci_A 180 YVAKNGIHLRSKYPYKAKQ-----------------GTCRAKQV---GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSV 238 (322)
T ss_dssp HHHHHCBCBTTTSCCCSSC-----------------CCCTTTTC---CSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEE
T ss_pred HHHHhCCCchhhCCCCCCC-----------------CCCCCCCC---CCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEE
Confidence 9999999999999996542 12322110 01234577776 65 478899999986 99999
Q ss_pred EEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 255 SFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|+++ ++|++|++|||+++|+. .++|||+||||| +++|++||||
T Consensus 239 ~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~~~g~~yWiv 283 (322)
T 1pci_A 239 VVESKGRPFQLYKGGIFEGPCGT-KVDGAVTAVGYG-KSGGKGYILI 283 (322)
T ss_dssp EECTTCHHHHTEEEEEECCSCCS-CCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEecccccccccCCeEeCCCCCC-CCCEEEEEEEEe-ccCCccEEEE
Confidence 99996 78999999999876654 469999999999 7789999997
No 10
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.5e-58 Score=422.44 Aligned_cols=245 Identities=24% Similarity=0.397 Sum_probs=189.7
Q ss_pred hccccc-chhhhccccccChHH--HHHHHHcCCCCceEEecCCCCCCCCHHHHHHh-hCCCCCCCCCCC-CCCccccCCC
Q 022267 21 QTFAEG-VVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKHL-LGVKPTPKGLLL-GVPVKTHDKS 95 (300)
Q Consensus 21 ~~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~~-~~~~~~~~~~~~-~~~~~~~~~~ 95 (300)
.+.+.| +..|...|+.||.++ +|++||+ .+.+|++|+| +|+|||.+||+++ ++..+....... ..........
T Consensus 72 ~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~-~~~sy~~g~N-~FaDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (363)
T 3tnx_A 72 KHNKIYKNIDEKIYRFEIFKDNLKYIDETNK-KNNSYWLGLN-VFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGD 149 (363)
T ss_dssp HTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT-SCCSEEECSC-TTTTSCHHHHHHHHSCSSCSCCCCSSSSSSCCCCCSC
T ss_pred HcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEecc-ccccCCHHHHHHHhcccccccccccccccccccCccc
Confidence 445555 556777899999995 6999998 4689999999 9999999999984 444332222111 1111112334
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||
T Consensus 150 ~~lP~s~DWR~~----g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~--~~~GC~GG~~~~a~ 223 (363)
T 3tnx_A 150 VNIPEYVDWRQK----GAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSAL 223 (363)
T ss_dssp CCCCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHH
T ss_pred CCCCcceecccC----CCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC--CCCCCCCCChHHHH
Confidence 579999999998 889999999999999999999999999999999999999999999987 46899999999999
Q ss_pred HHHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEE
Q 022267 176 RYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 176 ~~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~ 253 (300)
+|++++|+++|++|||.+.++ .|...+.. .....+.+|. +. .++..++.+| .+|||+
T Consensus 224 ~yi~~~Gi~~e~~yPY~~~~~-------------~c~~~~~~-------~~~~~~~~~~~~~~~~e~~l~~~v-~~gPvs 282 (363)
T 3tnx_A 224 QLVAQYGIHYRNTYPYEGVQR-------------YCRSREKG-------PYAAKTDGVRQVQPYNEGALLYSI-ANQPVS 282 (363)
T ss_dssp HHHHHTCBCBTTTSCCCSSCC-------------CCCGGGGC-------SCSBCCCEEEEECSSCHHHHHHHH-TTSCEE
T ss_pred hHHHhcCccccccCCCcCcCC-------------CcccCCCC-------CceeeccceEEcchhhHHHHHHHH-HcCCcE
Confidence 999999999999999965421 11111111 1123344555 43 5666666666 579999
Q ss_pred EEEEe-ccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 254 VSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 254 v~i~~-~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+|++ .++|++|++|||.++++.. .||||+||||| + +||||
T Consensus 283 vai~a~~~~F~~Y~sGVy~~~~~~~-lnHaV~iVGyG-~----~YWIV 324 (363)
T 3tnx_A 283 VVLEAAGKDFQLYRGGIFVGPCGNK-VDHAVAAVGYG-P----NYILI 324 (363)
T ss_dssp EEECCCSHHHHTEEEEEECCCCCSC-CCEEEEEEEEE-T----TEEEE
T ss_pred EEEEecchhhhCCCCCEECCCCCCC-CCeEEEEEEcC-C----CcEEE
Confidence 99996 4789999999999887654 69999999999 3 59997
No 11
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.9e-57 Score=425.20 Aligned_cols=246 Identities=29% Similarity=0.577 Sum_probs=146.9
Q ss_pred hhhccccccChHH--HHHHHHcCCCCceEEe-cCCCCCCCCHHHHHHhhCCC-CCCCCCC-CCCCccccCCCCCCCCccc
Q 022267 29 SKLKLDSHILQDS--IIKEVNENPKAGWKAA-RNPQFSNYTVGQFKHLLGVK-PTPKGLL-LGVPVKTHDKSLKLPKSFD 103 (300)
Q Consensus 29 ~~~~~~~~i~~~~--~i~~~N~~~~~~~~~~-~n~~fsd~t~~Ef~~~~~~~-~~~~~~~-~~~~~~~~~~~~~lP~~~D 103 (300)
.+...|+.||.++ +|++||++ +.+|+++ +| +|+|||.+||+++++.. ....... ............+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n-~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYM-EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeeccc-ccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEE
Confidence 3456789999884 79999985 5789998 78 99999999999866532 2111100 0000011123457999999
Q ss_pred cCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCC--cccCHHHHHHhcCCCCCCCCCCCChHHH-HHHHHH
Q 022267 104 ARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMN--LSLSVNDLLACCGFLCGDGCDGGYPISA-WRYFVH 180 (300)
Q Consensus 104 ~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~--~~lS~q~l~dC~~~~~~~gC~GG~~~~a-~~~~~~ 180 (300)
||+.+ ++++|+||||||.||||||||++++||++++|+++.. +.||+|+|+||+. .+.||+||++..+ ++|+++
T Consensus 213 wR~~~-g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~~ 289 (441)
T 3pdf_A 213 WRNVH-GINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQD 289 (441)
T ss_dssp TTCBT-TBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHHH
T ss_pred CCcCC-CCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHHh
Confidence 99962 3457999999999999999999999999999999865 4599999999986 4689999999987 899999
Q ss_pred cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-e-----CCCHHHHHHHHHHcCCEEE
Q 022267 181 HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-I-----NSDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 181 ~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~-----~~~~~~ik~~l~~~GPV~v 254 (300)
+|+++|++|||.+..+ .|..... ...+.+.+|. + ..++++||++|+++|||+|
T Consensus 290 ~Gi~tE~~yPY~~~~~-----------------~C~~~~~----~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsv 348 (441)
T 3pdf_A 290 FGLVEEACFPYTGTDS-----------------PCKMKED----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAV 348 (441)
T ss_dssp TCBCBGGGSCCCSSCC-----------------CSCCCSS----CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEE
T ss_pred cCCCcHHHeeecccCC-----------------CCCCccc----cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEE
Confidence 9999999999976421 2221110 1112344554 3 2588999999999999999
Q ss_pred EEEeccccccCCCCeEeccCCC------CCCCcEEEEEEecCC-CCCcCceec
Q 022267 255 SFTVYEDFAHYKSGVYKHITGD------VMGGHAVKLIGWGTS-DDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~~~f~~Y~~Giy~~~~~~------~~~~Hav~iVGyg~~-~~g~~YWiv 300 (300)
+|+++++|++|++|||.++++. ..++|||+|||||++ ++|++||||
T Consensus 349 ai~a~~~F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIV 401 (441)
T 3pdf_A 349 AFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIV 401 (441)
T ss_dssp EECCCGGGGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEE
T ss_pred EEEecccccccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEE
Confidence 9999989999999999877543 247999999999943 479999997
No 12
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=2.7e-57 Score=408.26 Aligned_cols=240 Identities=24% Similarity=0.435 Sum_probs=189.5
Q ss_pred hccccc-chhhhccccccChHH--HHHHHHcCCCCceEEecCCCCCCCCHHHHHH-hhCCCCCCCCCCCCCCcccc----
Q 022267 21 QTFAEG-VVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKH-LLGVKPTPKGLLLGVPVKTH---- 92 (300)
Q Consensus 21 ~~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~-~~~~~~~~~~~~~~~~~~~~---- 92 (300)
.+.+.+ +..|...|+.||.++ +|++ |+ + ++| +|+|||.+||++ +++............+....
T Consensus 14 ~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~---g~N-~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 1xkg_A 14 AFNKSYATFEDEEAARKNFLESVKYVQS-NG----G---AIN-HLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNAC 84 (312)
T ss_dssp HTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C---CCC-TTTTSCHHHHHHHHSBCHHHHHHHHHHHC-----CBC
T ss_pred HcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C---CCC-cccCCCHHHHHHHhcCCCCccccccCCcccccccccc
Confidence 334555 457888899999986 4676 54 2 999 999999999998 66632111000000000000
Q ss_pred CCCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChH
Q 022267 93 DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPI 172 (300)
Q Consensus 93 ~~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~ 172 (300)
....+||++||||++ |+|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. ..||+||++.
T Consensus 85 ~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~GC~GG~~~ 157 (312)
T 1xkg_A 85 SINGNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGCHGDTIP 157 (312)
T ss_dssp CCCSCCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHH
T ss_pred cccccCCCccccccC----CCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCCCCCCCHH
Confidence 012379999999998 789999999999999999999999999999999999999999999983 3899999999
Q ss_pred HHHHHHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHH-c
Q 022267 173 SAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYK-N 249 (300)
Q Consensus 173 ~a~~~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~-~ 249 (300)
.||+|+++.|+++|++|||.+.. ..|. ... ...+++.+|. ++ .++++||++|++ +
T Consensus 158 ~a~~yi~~~Gi~~e~~yPY~~~~-----------------~~C~-~~~----~~~~~i~~y~~v~~~~~~~ik~al~~~~ 215 (312)
T 1xkg_A 158 RGIEYIQHNGVVQESYYRYVARE-----------------QSCR-RPN----AQRFGISNYCQIYPPNANKIREALAQTH 215 (312)
T ss_dssp HHHHHHHHHCEEBGGGSCCCSSC-----------------CCCC-CCS----SCEECCSEEEECCSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCccccCCccCCC-----------------CCCC-CCC----CceEEEeeEEEeCCCCHHHHHHHHHhcC
Confidence 99999999999999999996541 1333 110 2346778887 65 589999999999 9
Q ss_pred CCEEEEEEecc--ccccCCCCeEeccCCC--CCCCcEEEEEEecCCCCCcCceec
Q 022267 250 GPVEVSFTVYE--DFAHYKSGVYKHITGD--VMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 250 GPV~v~i~~~~--~f~~Y~~Giy~~~~~~--~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|||+|+|++++ +|++|++|||..+.|. .. +|||+||||| +++|++||||
T Consensus 216 GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg-~~~g~~yWiv 268 (312)
T 1xkg_A 216 SAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYS-NAQGVDYWIV 268 (312)
T ss_dssp CCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEE-EETTEEEEEE
T ss_pred CCEEEEEEecccccccccCCcEEcCCCCCCCcC-ceEEEEEEEe-ccCCceEEEE
Confidence 99999999987 8999999999987554 36 9999999999 7889999997
No 13
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.8e-53 Score=377.06 Aligned_cols=203 Identities=54% Similarity=1.161 Sum_probs=167.4
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhC--CCcccCHHHHHHhcCCCCCCCCCCCChHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPIS 173 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~~~~~gC~GG~~~~ 173 (300)
.+||++||||++|++++.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+....+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 4799999999999999999999999999999999999999999999876 57999999999998522358999999999
Q ss_pred HHHHHHHcCccC-------CCCcCCCCCCCCC------CCCCCCCCCCcccccccccccc-ccccceeeEeeeEEeCCCH
Q 022267 174 AWRYFVHHGVVT-------EECDPYFDSTGCS------HPGCEPAYPTPKCVRKCVKKNQ-LWRNSKHYSISAYRINSDP 239 (300)
Q Consensus 174 a~~~~~~~G~~~-------e~~yPY~~~~~c~------~~~~~~~~~~~~c~~~C~~~~~-~~~~~~~~~i~~~~~~~~~ 239 (300)
||+|++++|+++ |++|||... .|. ...|.....++.|...|..... .+...+.+.+..|.++.++
T Consensus 85 a~~y~~~~Gi~~~~~Y~~~e~~~PY~~~-~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~ 163 (266)
T 3cbj_A 85 AWNFWTRKGLVSGGLYESHVGCRPYSIP-PCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSE 163 (266)
T ss_dssp HHHHHHHTCBCBCCSTTCCCSSSCCCSC-CCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCH
T ss_pred HHHHHHHhCcCcCccccccccccCcccc-cccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCH
Confidence 999999999999 999999632 121 2344433345667777754221 1222333445556677789
Q ss_pred HHHHHHHHHcCCEEEEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 240 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 240 ~~ik~~l~~~GPV~v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++||++|+++|||+|+|+++++|++|++|||.++++...++|||+||||| +++|++||||
T Consensus 164 ~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg-~~~g~~yWiv 223 (266)
T 3cbj_A 164 KDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWG-VENGTPYWLV 223 (266)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEE-EETTEEEEEE
T ss_pred HHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEec-ccCCceEEEE
Confidence 99999999999999999998899999999999877666679999999999 7889999997
No 14
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.5e-52 Score=368.92 Aligned_cols=201 Identities=51% Similarity=1.070 Sum_probs=165.8
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhC--CCcccCHHHHHHhcCCCCCCCCCCCChHHH
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPISA 174 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a 174 (300)
+||++||||++|++|+.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. ..+.||+||++..|
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~-~~~~GC~GG~~~~a 80 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCE-SCGLGCEGGILGPA 80 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCT-TSBCTTBCBCHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhc-CCCCCCCCCCHHHH
Confidence 699999999999999999999999999999999999999999999987 789999999999986 34689999999999
Q ss_pred HHHHHHcCccCCCCc-------CCCCCCCCC------CCCCCCC-CCCccccccccccccc-cccceeeEeeeEEeCCCH
Q 022267 175 WRYFVHHGVVTEECD-------PYFDSTGCS------HPGCEPA-YPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDP 239 (300)
Q Consensus 175 ~~~~~~~G~~~e~~y-------PY~~~~~c~------~~~~~~~-~~~~~c~~~C~~~~~~-~~~~~~~~i~~~~~~~~~ 239 (300)
|+|++++|+++|++| ||... .|. ...|... ..++.|...|...... +...+.+....|.+..++
T Consensus 81 ~~yi~~~Gi~~e~~y~~~~~c~PY~~~-~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (254)
T 3qsd_A 81 WDYWVKEGIVTGSSKENHAGCEPYPFP-KCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDE 159 (254)
T ss_dssp HHHHHHTCBCBCCCTTTCCSSSCCSSC-CCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCH
T ss_pred HHHHHHcCCCcccccccCcCcCCcccc-cccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcH
Confidence 999999999998888 99521 111 1223211 1245666777654221 222333444456677799
Q ss_pred HHHHHHHHHcCCEEEEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 240 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 240 ~~ik~~l~~~GPV~v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++||++|+++|||+|+|+++++|++|++|||.++++...++|||+||||| +++|++||||
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg-~~~g~~ywiv 219 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWG-VENKAPYWLI 219 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEE-EETTEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEe-ecCCeeEEEE
Confidence 99999999999999999998899999999999887766679999999999 7889999997
No 15
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.4e-50 Score=349.07 Aligned_cols=178 Identities=30% Similarity=0.579 Sum_probs=152.3
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++++++..++||+|+|+||+....+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y 76 (220)
T 2xu3_A 1 APRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQY 76 (220)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHH
Confidence 7999999998 789999999999999999999999999999999999999999999986334689999999999999
Q ss_pred HH-HcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEE
Q 022267 178 FV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~-~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~ 255 (300)
++ +.|+++|++|||.+.. ..|+.... ...+++.+|. ++.++++||++|+++|||+|+
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~ 135 (220)
T 2xu3_A 77 VQDNGGLDSEESYPYEATE-----------------ESCKYNPK----YSVANDTGFVDIPKQEKALMKAVATVGPISVA 135 (220)
T ss_dssp HHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCSEEEECCSCHHHHHHHHHHTCCEEEE
T ss_pred HHHhCCcccccccCCcccC-----------------cCccCCCC----CcceeeeeEEEeCCCHHHHHHHHHhcCCEEEE
Confidence 96 6899999999996541 13332211 2345677777 666899999999999999999
Q ss_pred EEec-cccccCCCCeEeccCC-CCCCCcEEEEEEecC---CCCCcCceec
Q 022267 256 FTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGT---SDDGEDYWVC 300 (300)
Q Consensus 256 i~~~-~~f~~Y~~Giy~~~~~-~~~~~Hav~iVGyg~---~~~g~~YWiv 300 (300)
|+++ ++|++|++|||+.+.| ...++|||+|||||. +++|++||||
T Consensus 136 ~~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWiv 185 (220)
T 2xu3_A 136 IDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV 185 (220)
T ss_dssp ECCCSHHHHTCCSSEECCTTCCSSCCCEEEEEEEEEECCCSSSCCEEEEE
T ss_pred EeecCcccccccceEEcCCCCCCCCCCeEEEEEEcCCccccCCCCcEEEE
Confidence 9997 5899999999988744 446899999999993 4578999997
No 16
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.4e-50 Score=348.01 Aligned_cols=175 Identities=31% Similarity=0.635 Sum_probs=152.6
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|
T Consensus 1 lP~~~Dwr~~----~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~ 74 (215)
T 3kwz_A 1 APDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQY 74 (215)
T ss_dssp CTTCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCCCccCcC----CCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999998 789999999999999999999999999999999999999999999986 4689999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v 254 (300)
++++ |+++|++|||.+.. ..|..... ....++.+|. ++ .++++||++|+++|||++
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v 133 (215)
T 3kwz_A 75 VQKNRGIDSEDAYPYVGQE-----------------ESCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVGPVSV 133 (215)
T ss_dssp HHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCCEEECCTTCHHHHHHHHHHTCCEEE
T ss_pred HHHhCCccccccCCCccCC-----------------CccccCCC----CceeEecceEEeCCCCHHHHHHHHHHCCCEEE
Confidence 9888 99999999996541 23332221 2345677777 55 488999999999999999
Q ss_pred EEEec-cccccCCCCeEeccCC-CCCCCcEEEEEEecCCCCCcCceec
Q 022267 255 SFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~-~~f~~Y~~Giy~~~~~-~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|+++ ++|++|++|||..+.+ ...++|||+||||| +++|++||||
T Consensus 134 ~~~~~~~~f~~y~~Giy~~~~~~~~~~~HaV~iVGyg-~~~g~~yWiv 180 (215)
T 3kwz_A 134 AIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-IQKGNKHWII 180 (215)
T ss_dssp EECCCSHHHHTCCSSEECCTTCCTTCCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEeechhhhhcccCCeECCCCCCCChhhCEEEEEEEe-ccCCceEEEE
Confidence 99997 6899999999988765 45689999999999 7889999997
No 17
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=4.1e-50 Score=344.87 Aligned_cols=176 Identities=28% Similarity=0.547 Sum_probs=149.4
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~Dwr~~----g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (215)
T 3i06_A 1 APAAVDWRAR----GAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEW 74 (215)
T ss_dssp CCSEEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHH
T ss_pred CCCcccCCcC----CCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHH
Confidence 7999999998 889999999999999999999999999999999999999999999986 4689999999999999
Q ss_pred HHHc---CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEE
Q 022267 178 FVHH---GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 178 ~~~~---G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~ 253 (300)
++++ |+++|++|||.+..+ ..+ .|..... ...+++.+|. ++.++++||++|+++|||+
T Consensus 75 ~~~~~~gGi~~e~~yPY~~~~~----------~~~----~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~ 136 (215)
T 3i06_A 75 IVQENNGAVYTEDSYPYASGEG----------ISP----PCTTSGH----TVGATITGHVELPQDEAQIAAWLAVNGPVA 136 (215)
T ss_dssp HHHHSTTEEEC-CCSCCCCTTS----------CCC----CCCCSSC----CEEEEEEEEEECCSCHHHHHHHHHHHCCEE
T ss_pred HHHhccccccccCccCCcCCCC----------CCC----ccccCCc----ccceEecceEEeCChHHHHHHHHHHCCCEE
Confidence 9986 799999999965411 112 2332221 2345677777 7789999999999999999
Q ss_pred EEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 254 VSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 254 v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|++ ++|++|++|||+.. ....++|||+||||| +++|++||||
T Consensus 137 v~~~~-~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg-~~~g~~yWiv 180 (215)
T 3i06_A 137 VAVDA-SSWMTYTGGVMTSC-VSEQLDHGVLLVGYN-DSAAVPYWII 180 (215)
T ss_dssp EEECC-TTGGGCCSSEECSC-CCSCCCEEEEEEEEE-SSSSSCEEEE
T ss_pred EEEEc-hHHhcCCCCcccCC-CCCccCcEEEEEEEe-ccCCcEEEEE
Confidence 99999 68999999999753 334469999999999 8889999997
No 18
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.8e-50 Score=346.96 Aligned_cols=174 Identities=27% Similarity=0.568 Sum_probs=148.4
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (214)
T 1m6d_A 1 APPEWDWRSK----GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSA 74 (214)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999998 889999999999999999999999999999999999999999999986 3579999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~ 255 (300)
++++ |+++|++|||.+.. ..|..... ...+.+.++. ++.++++||++|+++|||+|+
T Consensus 75 i~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~ 133 (214)
T 1m6d_A 75 IKNLGGLETEDDYSYQGHM-----------------QSCQFSAE----KAKVYIQDSVELSQNEQKLAAWLAKRGPISVA 133 (214)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCCCGG----GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEE
T ss_pred HHHhcCcccccCcCcCCCC-----------------CcCCCCcc----cceEEecCEEEeChHHHHHHHHHHhCCCEEEE
Confidence 9986 89999999996541 12332211 1123456665 677899999999999999999
Q ss_pred EEeccccccCCCCeEecc---CCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 256 FTVYEDFAHYKSGVYKHI---TGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 256 i~~~~~f~~Y~~Giy~~~---~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|++. +|++|++|||+.+ +....++|||+||||| +++|++||||
T Consensus 134 i~~~-~f~~Y~~Giy~~~~~~c~~~~~~HaV~iVGyg-~~~g~~yWiv 179 (214)
T 1m6d_A 134 INAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYG-QRSDVPFWAI 179 (214)
T ss_dssp ECTH-HHHHCCSSEECCCGGGSCTTCCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEec-hhhhcCCceecCCCCcCCCCcCCEEEEEEEEe-ecCCcEEEEE
Confidence 9996 5999999999863 3344589999999999 7889999997
No 19
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=3.3e-50 Score=346.40 Aligned_cols=177 Identities=30% Similarity=0.629 Sum_probs=153.3
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhc-CCCCCCCCCCCChHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACC-GFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~-~~~~~~gC~GG~~~~a~~ 176 (300)
||++||||++ |+|+||||||.||||||||++++||++++++++..++||+|+|+||+ ....+.||+||++..|++
T Consensus 2 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~ 77 (218)
T 3ovx_A 2 LPDSVDWREK----GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQ 77 (218)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHH
T ss_pred CCCCCCcccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHH
Confidence 8999999998 88999999999999999999999999999999999999999999998 322468999999999999
Q ss_pred HHHH-cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEE
Q 022267 177 YFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 177 ~~~~-~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~ 253 (300)
|+.+ .|+++|++|||.+. ...|..... ...+++..|. ++ .++++||++|+++|||+
T Consensus 78 ~~~~~~Gi~~e~~yPY~~~-----------------~~~C~~~~~----~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~ 136 (218)
T 3ovx_A 78 YIIDNKGIDSDASYPYKAM-----------------DQKCQYDSK----YRAATCSKYTELPYGREDVLKEAVANKGPVS 136 (218)
T ss_dssp HHHHHTCEEBTTTSCCCSS-----------------CCCCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred HHHHhCCcCcccccCccCC-----------------CCcccCCCc----cceeeeccEEEeCCCCHHHHHHHHHhcCCEE
Confidence 9976 69999999999654 123433221 3345677777 54 58899999999999999
Q ss_pred EEEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 254 VSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 254 v~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|++. ++|++|++|||..+.+...++|||+||||| +++|++||||
T Consensus 137 v~~~~~~~~f~~y~~Giy~~~~~~~~~~HaV~iVGyg-~~~g~~ywiv 183 (218)
T 3ovx_A 137 VGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYG-DLNGKEYWLV 183 (218)
T ss_dssp EEECCCSHHHHHCCSSEECCTTCCSCCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEEEecchhhhcccCceecCCCCCcccCcEEEEEEEe-ccCCceEEEE
Confidence 999996 589999999999887766789999999999 7889999997
No 20
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=4.4e-50 Score=344.82 Aligned_cols=174 Identities=30% Similarity=0.565 Sum_probs=149.5
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (216)
T 1ppo_A 1 LPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEY 74 (216)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v~ 255 (300)
++++|+++|++|||.+.. + .|+.... ....+++.+|. ++ .++++||++|++ |||+|+
T Consensus 75 i~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~ 133 (216)
T 1ppo_A 75 VAKNGIHLRSKYPYKAKQ-------------G----TCRAKQV---GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVV 133 (216)
T ss_dssp HHHHCBCBTTTSCCCSSC-------------C----CCCGGGC---CSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEE
T ss_pred HHHhCcCccccCCccCCC-------------C----CcCCCCC---CCceEEeccEEEECCCCHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 1 2322110 02345677887 65 488999999986 999999
Q ss_pred EEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 256 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 256 i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+++ ++|++|++|||++++... .+|||+||||| +++|++||||
T Consensus 134 ~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~ywiv 177 (216)
T 1ppo_A 134 VESKGRPFQLYKGGIFEGPCGTK-VDHAVTAVGYG-KSGGKGYILI 177 (216)
T ss_dssp ECCCSHHHHHCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEE
T ss_pred EecCChhhhhcCCceECCCCCCC-CCEEEEEEEee-ccCCccEEEE
Confidence 9996 799999999998766554 69999999999 7789999997
No 21
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=6.8e-50 Score=349.79 Aligned_cols=175 Identities=31% Similarity=0.611 Sum_probs=149.4
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHH
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~ 176 (300)
+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 ~lP~~~DwR~~----g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~ 74 (246)
T 2b1m_A 1 DAPESWDWSKK----GVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFE 74 (246)
T ss_dssp -CCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHH
T ss_pred CCCCcCCCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHH
Confidence 48999999998 789999999999999999999999999999999999999999999985 468999999999999
Q ss_pred HHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeE---E-eC-CCHHHHHHHHHH--
Q 022267 177 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAY---R-IN-SDPEDIMAEIYK-- 248 (300)
Q Consensus 177 ~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~---~-~~-~~~~~ik~~l~~-- 248 (300)
|++++ |+++|++|||.+.. ..|..... ...+++.+| . ++ .++++||++|++
T Consensus 75 y~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~ 133 (246)
T 2b1m_A 75 WVVKHGGIASEADYPYKARD-----------------GKCKANEI----QDKVTIDNYGVQILSNESTESEAESSLQSFV 133 (246)
T ss_dssp HHHHTTCBCBTTTSCCCSSC-----------------CCCCGGGC----CCCBCCSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHhCCcCccccccccCCC-----------------CcCcCCCC----CCceeEcCcceeeecCCChHHHHHHHHHhhc
Confidence 99998 99999999996541 12332211 223456677 5 55 588899999998
Q ss_pred -cCCEEEEEEeccccccCCCCeEeccCC-CCC-CCcEEEEEEecCCCCCcCceec
Q 022267 249 -NGPVEVSFTVYEDFAHYKSGVYKHITG-DVM-GGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 249 -~GPV~v~i~~~~~f~~Y~~Giy~~~~~-~~~-~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|||+|+|++ ++|++|++|||+.+.| ... ++|||+||||| +++|++||||
T Consensus 134 ~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg-~~~g~~yWiv 186 (246)
T 2b1m_A 134 LEQPISVSIDA-KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYG-SEDGVDYWIA 186 (246)
T ss_dssp HHSCEEEEECC-TTGGGCCSSEECCTTCCSSCCCCEEEEEEEEE-EETTEEEEEE
T ss_pred cCCCEEEEEEc-chhhcccceeecCCCCCCCCcCceEEEEEEEe-ccCCceEEEE
Confidence 6999999999 8999999999988544 433 79999999999 7789999997
No 22
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=4.6e-50 Score=345.91 Aligned_cols=174 Identities=30% Similarity=0.639 Sum_probs=149.2
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHH
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~ 176 (300)
+||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+
T Consensus 2 ~lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~ 75 (221)
T 1cqd_A 2 DLPDSIDWREN----GAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT--ANHGCRGGWMNPAFQ 75 (221)
T ss_dssp -CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHH
T ss_pred CCCCcCcCCCC----CCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCC--CCCCCCCCCHHHHHH
Confidence 58999999998 789999999999999999999999999999999999999999999986 268999999999999
Q ss_pred HHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEE
Q 022267 177 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 177 ~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~ 253 (300)
|++++ |+++|++|||.+.. ..|..... ...+++..|. ++ .++++||++|++ |||+
T Consensus 76 y~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~ 133 (221)
T 1cqd_A 76 FIVNNGGINSEETYPYRGQD-----------------GICNSTVN----APVVSIDSYENVPSHNEQSLQKAVAN-QPVS 133 (221)
T ss_dssp HHHHHTSBCBTTTSCCCSSC-----------------CCCCSSSC----CCSBCCSEEEECCSSCHHHHHHHHTT-SCEE
T ss_pred HHHHhCCccccccCCccCCC-----------------CCcCCCCC----CceEEeccEEEeCCchHHHHHHHHHh-CCEE
Confidence 99987 99999999996541 12332211 2345677887 65 478899999975 9999
Q ss_pred EEEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 254 VSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 254 v~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+|+++ ++|++|++|||+.++.. .++|||+||||| +++|++||||
T Consensus 134 v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg-~~~g~~yWiv 179 (221)
T 1cqd_A 134 VTMDAAGRDFQLYRSGIFTGSCNI-SANHALTVVGYG-TENDKDFWIV 179 (221)
T ss_dssp EEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEEeccCcccccccCccccCCCCC-cCCeEEEEEEEc-ccCCCcEEEE
Confidence 999997 68999999999886554 489999999999 7789999997
No 23
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.2e-50 Score=346.97 Aligned_cols=177 Identities=31% Similarity=0.614 Sum_probs=152.9
Q ss_pred CCCccccCCCCCCCC-CCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHH
Q 022267 98 LPKSFDARSAWPQCS-TISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 98 lP~~~D~R~~w~~~~-~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~ 176 (300)
||++||||++ | +|+||||||.||||||||++++||++++++++..++||+|+|+||+....+.||+||++..|++
T Consensus 1 lP~~~DwR~~----~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~ 76 (220)
T 8pch_A 1 YPPSMDWRKK----GNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFE 76 (220)
T ss_dssp CCSCEEHHHH----SSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHH
T ss_pred CCCCEecCcC----CCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHH
Confidence 7999999998 5 7999999999999999999999999999999999999999999998633468999999999999
Q ss_pred HHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEE
Q 022267 177 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 177 ~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~ 253 (300)
|++++ |+++|++|||.+. ...|..... ...+.+.+|. +. .++++||++|+++|||+
T Consensus 77 ~~~~~~Gi~~e~~yPY~~~-----------------~~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~ 135 (220)
T 8pch_A 77 YIRYNKGIMGEDTYPYKGQ-----------------DDHCKFQPD----KAIAFVKDVANITMNDEEAMVEAVALYNPVS 135 (220)
T ss_dssp HHHHHTCEEBTTTSCCCSS-----------------CCCCCCCGG----GEEECEEEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred HHHHcCCcCcccccCccCC-----------------CCCCCCCCC----cceEEeCCEEEeCCCCHHHHHHHHHhcCCEE
Confidence 99988 9999999999654 123332221 2345677776 54 58899999999999999
Q ss_pred EEEEeccccccCCCCeEeccCCCC---CCCcEEEEEEecCCCCCcCceec
Q 022267 254 VSFTVYEDFAHYKSGVYKHITGDV---MGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 254 v~i~~~~~f~~Y~~Giy~~~~~~~---~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|+++++|++|++|||..+.+.. .++|||+||||| +++|++||||
T Consensus 136 ~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGyg-~~~g~~yWiv 184 (220)
T 8pch_A 136 FAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYG-EENGIPYWIV 184 (220)
T ss_dssp EEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEEEeccchhhcCCCcccCCcCCCCCCcCCcEEEEEEEE-ccCCeeEEEE
Confidence 999998899999999998875532 589999999999 8889999997
No 24
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=7.6e-50 Score=343.02 Aligned_cols=172 Identities=31% Similarity=0.657 Sum_probs=148.6
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (215)
T 1iwd_A 1 LPSFVDWRSK----GAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT--ASHGCNGGWMNNAFQY 74 (215)
T ss_dssp CCSCEEGGGG----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC--CCCCCCCCCHHHHHHH
Confidence 7999999998 889999999999999999999999999999999999999999999986 2689999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v 254 (300)
++++ |+++|++|||.+.. ..|.... ...+++.+|. +. .++++||++|++ |||+|
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v 131 (215)
T 1iwd_A 75 IITNGGIDTQQNYPYSAVQ-----------------GSCKPYR-----LRVVSINGFQRVTRNNESALQSAVAS-QPVSV 131 (215)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCTTC-----CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEE
T ss_pred HHHhCCcccccccCccCCC-----------------CCCCCCC-----CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEE
Confidence 9987 99999999996541 1233221 1235677777 54 578899999876 99999
Q ss_pred EEEecc-ccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 255 SFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~~-~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|++++ +|++|++|||++++.. .++|||+||||| +++|++||||
T Consensus 132 ~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~~~g~~yWiv 176 (215)
T 1iwd_A 132 TVEAAGAPFQHYSSGIFTGPCGT-AQNHGVVIVGYG-TQSGKNYWIV 176 (215)
T ss_dssp EECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEE-EETTEEEEEE
T ss_pred EEecCCcchhhcCCceECCCCCC-cCCEEEEEEEEe-ccCCccEEEE
Confidence 999976 7999999999886654 579999999999 7789999997
No 25
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=8.1e-50 Score=343.66 Aligned_cols=174 Identities=30% Similarity=0.597 Sum_probs=149.0
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (218)
T 1yal_A 1 YPQSIDWRAK----GAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQY 74 (218)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999984 4689999999999999
Q ss_pred HHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v~ 255 (300)
++++|+++|++|||.+.. + .|+.... ....+++.+|. ++ .++++||++|++ |||+++
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~ 133 (218)
T 1yal_A 75 VANNGVHTSKVYPYQAKQ-------------Y----KCRATDK---PGPKVKITGYKRVPSNCETSFLGALAN-QPLSVL 133 (218)
T ss_dssp HHHHCBCBTTTSCCCSSC-------------C----CCCGGGC---CSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEE
T ss_pred HHHcCCCccccccccCCC-------------C----CcccCcC---CCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 1 2322110 02345677887 65 478899999976 999999
Q ss_pred EEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 256 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 256 i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+++ ++|++|++|||++++... ++|||+||||| +++|++||||
T Consensus 134 i~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~yWiv 177 (218)
T 1yal_A 134 VEAGGKPFQLYKSGVFDGPCGTK-LDHAVTAVGYG-TSDGKNYIII 177 (218)
T ss_dssp ECCCSHHHHTCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEE
T ss_pred EeccchhccccCCceECCCCCCC-CCEEEEEEEee-ccCCccEEEE
Confidence 9996 799999999998766554 69999999999 7789999997
No 26
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=9.8e-50 Score=343.78 Aligned_cols=176 Identities=32% Similarity=0.635 Sum_probs=149.9
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++++++..++||+|+|+||+....+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 76 (220)
T 3p5u_A 1 LPDYVDWRSS----GAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQF 76 (220)
T ss_dssp CCSCEETTTT----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHH
T ss_pred CCCCCcCCcC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHH
Confidence 7999999998 889999999999999999999999999999999999999999999997433689999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v 254 (300)
++++ |+++|++|||.+.. ..|..... ....+++.+|. ++ .++++||++| .+|||+|
T Consensus 77 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~---~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v 135 (220)
T 3p5u_A 77 IINNGGINTEANYPYTAEE-----------------GQCNLDLQ---QEKYVSIDTYENVPYNNEWALQTAV-AYQPVSV 135 (220)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCHHHH---TCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEE
T ss_pred HHHhCCcCcccccccccCC-----------------CCcCcCCC---CCceEEEccEEEeCCCcHHHHHHHH-hcCCEEE
Confidence 9987 89999999996541 12332111 12235677777 64 5788888888 7899999
Q ss_pred EEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 255 SFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|+++ ++|++|++|||++++... .+|||+||||| +++|++||||
T Consensus 136 ~~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~iVGyg-~~~g~~yWiv 180 (220)
T 3p5u_A 136 ALEAAGYNFQHYSSGIFTGPCGTA-VDHAVTIVGYG-TEGGIDYWIV 180 (220)
T ss_dssp EECCCSHHHHTCCSSEECCCCCCS-CCEEEEEEEEE-EETTEEEEEE
T ss_pred EEecCchhhccccCceECCCCCCc-cceEEEEEEEe-cCCCceEEEE
Confidence 99996 689999999998765544 69999999999 8899999997
No 27
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2.3e-49 Score=348.55 Aligned_cols=180 Identities=32% Similarity=0.610 Sum_probs=150.7
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. ..+.||+||++..||
T Consensus 2 ~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~-~~~~GC~GG~~~~a~ 76 (262)
T 2fo5_A 2 SDLPPSVDWRQK----GAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDT-ADNDGCQGGLMDNAF 76 (262)
T ss_dssp -CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCGGGCBCHHHHH
T ss_pred CCCCCcccCCCC----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcC-CCCCCCCCCCHHHHH
Confidence 369999999997 789999999999999999999999999999999999999999999986 246899999999999
Q ss_pred HHHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccce-eeEeeeEE-eC-CCHHHHHHHHHHcCC
Q 022267 176 RYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSK-HYSISAYR-IN-SDPEDIMAEIYKNGP 251 (300)
Q Consensus 176 ~~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~-~~~i~~~~-~~-~~~~~ik~~l~~~GP 251 (300)
+|++++ |+++|++|||.+.. ..|..... ..... .+++.+|. ++ .++++||++|++ ||
T Consensus 77 ~yi~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~-~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GP 137 (262)
T 2fo5_A 77 EYIKNNGGLITEAAYPYRAAR-----------------GTCNVARA-AQNSPVVVHIDGHQDVPANSEEDLARAVAN-QP 137 (262)
T ss_dssp HHHHHTTCEEBTTTSCCCSSC-----------------CCCCHHHH-HHHCCCEECCCEEEECCTTCHHHHHHHHHH-SC
T ss_pred HHHHHcCCcCchhcCCCcCcc-----------------CccCCccc-ccCCceeEEeceEEEcCCchHHHHHHHHHh-CC
Confidence 999998 99999999996541 23332110 00123 56778887 65 578899999977 99
Q ss_pred EEEEEEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 252 VEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 252 V~v~i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+++|+++ ++|++|++|||+.++... .+|||+|||||++++|++||||
T Consensus 138 V~v~i~~~~~~f~~Y~sGVy~~~c~~~-~~HaV~IVGyg~~~~G~~YWiv 186 (262)
T 2fo5_A 138 VSVAVEASGKAFMFYSEGVFTGECGTE-LDHGVAVVGYGVAEDGKAYWTV 186 (262)
T ss_dssp EEEEECCCSHHHHTCCSSEECCCCCCC-CCEEEEEEEEEECTTSCEEEEE
T ss_pred EEEEEecChHHHhccCCceECCCCCCc-CCEEEEEEEEcccCCCceEEEE
Confidence 99999997 689999999998866554 6999999999943369999997
No 28
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=8.8e-50 Score=344.46 Aligned_cols=173 Identities=26% Similarity=0.554 Sum_probs=144.6
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ +.|+||||||.||||||||++++||++++++++..+.||+|+|+||+.. +.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~--~~gC~GG~~~~a~~~ 74 (222)
T 3u8e_A 1 APASIDWRKK----GAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX--XXXXXGGDADDAFRW 74 (222)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHH
T ss_pred CCCcCcCCcC----CCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc--ccccCCCCHHHHHHH
Confidence 7999999998 8899999999999999999999999999999999999999999999972 689999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~ 255 (300)
++++ |+++|++|||.+.. ..|..... ..+++.+|. ++.++++||++| .+|||+|+
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~-----~~~~i~~~~~v~~~~~~i~~~l-~~GPV~v~ 131 (222)
T 3u8e_A 75 VITNGGIASDANYPYTGVD-----------------GTCDLNKP-----IAARIDGYTNVPNSSSALLDAV-AKQPVSVN 131 (222)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCCCSC-----CCBCCCEEEECCSCHHHHHHHH-HHSCEEEE
T ss_pred HHHcCCccchhcCCCcccC-----------------CccccCCC-----CeEEEccEEEeCCcHHHHHHHH-hCCCEEEE
Confidence 9999 99999999996541 23332221 145677777 667889999999 56999999
Q ss_pred EEecc-ccccCCC-CeEeccCCCC---CCCcEEEEEEecCCCC-CcCceec
Q 022267 256 FTVYE-DFAHYKS-GVYKHITGDV---MGGHAVKLIGWGTSDD-GEDYWVC 300 (300)
Q Consensus 256 i~~~~-~f~~Y~~-Giy~~~~~~~---~~~Hav~iVGyg~~~~-g~~YWiv 300 (300)
|+++. +|++|++ |||+.+.+.. .++|||+||||| +++ |++||||
T Consensus 132 i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~HaV~iVGyg-~~~~g~~yWiv 181 (222)
T 3u8e_A 132 IYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYG-SNGTNADYWIV 181 (222)
T ss_dssp ECCCSHHHHTCCCSSCBCCTTCCCCGGGCCEEEEEEEEE-ESSTTCEEEEE
T ss_pred EEecChhhhcEeCCceECCCcccCCCCcCCEEEEEEEEe-ecCCCCcEEEE
Confidence 99974 8999999 9998854433 579999999999 666 9999997
No 29
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=3.1e-49 Score=342.37 Aligned_cols=176 Identities=30% Similarity=0.569 Sum_probs=149.1
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHH
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR 176 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~ 176 (300)
+||++||||++ |.|+||||||.||||||||++++||++++|+++..+.||+|+|+||+. ..+.||+||++..||+
T Consensus 1 ~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~~gC~GG~~~~a~~ 75 (229)
T 1s4v_A 1 TVPASVDWRKK----GAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT-DQNQGCNGGLMDYAFE 75 (229)
T ss_dssp CCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCTTBCBCHHHHHH
T ss_pred CCCCCEeCCCC----CCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCC-CCCCCCCCCCHHHHHH
Confidence 48999999997 789999999999999999999999999999999999999999999985 2468999999999999
Q ss_pred HHHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEE
Q 022267 177 YFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVE 253 (300)
Q Consensus 177 ~~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~ 253 (300)
|++++ |+++|++|||.+. ...|..... ....+++.+|. ++ .++++||++|++ |||+
T Consensus 76 y~~~~~Gi~~e~~yPY~~~-----------------~~~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~ 134 (229)
T 1s4v_A 76 FIKQRGGITTEANYPYEAY-----------------DGTCDVSKE---NAPAVSIDGHENVPENDENALLKAVAN-QPVS 134 (229)
T ss_dssp HHHHHTCBCBTTTSCCCSS-----------------CCCCCHHHH---TCCCBCCCEEEECCTTCHHHHHHHHHH-SCEE
T ss_pred HHHHhCCccccccCCccCC-----------------CCCCCCCCC---CCcEEEeeeEEEeCCccHHHHHHHHhc-CCEE
Confidence 99998 9999999999654 123332110 12345677887 65 478889999876 9999
Q ss_pred EEEEe-ccccccCCCCeEeccCCCCCCCcEEEEEEecCCCC-CcCceec
Q 022267 254 VSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDD-GEDYWVC 300 (300)
Q Consensus 254 v~i~~-~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~-g~~YWiv 300 (300)
|+|++ .++|++|++|||+.++.. .++|||+||||| +++ |++||||
T Consensus 135 v~i~~~~~~f~~Y~~Giy~~~c~~-~~~HaV~iVGyg-~~~~g~~yWiv 181 (229)
T 1s4v_A 135 VAIDAGGSDFQFYSEGVFTGSCGT-ELDHGVAIVGYG-TTIDGTKYWTV 181 (229)
T ss_dssp EEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEE-ECTTSCEEEEE
T ss_pred EEEEeCcHHHhhCCCcEECCCCCC-CCCeEEEEEEec-cccCCCCEEEE
Confidence 99999 578999999999876554 469999999999 555 9999997
No 30
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.4e-49 Score=341.86 Aligned_cols=175 Identities=28% Similarity=0.553 Sum_probs=151.9
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ |.|+||||||.||||||||++++||++++++++..++||+|+|+||+. +.||+||++..|+
T Consensus 8 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~ 80 (222)
T 3f5v_A 8 GNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGI 80 (222)
T ss_dssp CCCCSCEEHHHH----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHH
T ss_pred cCCCCCCCCccC----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHH
Confidence 579999999998 889999999999999999999999999999999999999999999986 6899999999999
Q ss_pred HHHHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-e-CCCHHHHHHHHHH-cCCE
Q 022267 176 RYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-I-NSDPEDIMAEIYK-NGPV 252 (300)
Q Consensus 176 ~~~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~-~~~~~~ik~~l~~-~GPV 252 (300)
+|++++|+++|++|||.+.. ..|.... ...+++.+|. + ..++++||++|++ +|||
T Consensus 81 ~~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV 138 (222)
T 3f5v_A 81 EYIQHNGVVQESYYRYVARE-----------------QSCRRPN-----AQRFGISNYCQIYPPNANKIREALAQTHSAI 138 (222)
T ss_dssp HHHHHHCEEBGGGSCCCSSC-----------------CCCCCCS-----SCEECCSEEEECCSCCHHHHHHHHHHHCCCE
T ss_pred HHHHHcCCCchhhCCCcccC-----------------CCccCCc-----CcceeeccEEEeCCCCHHHHHHHHHhcCCCE
Confidence 99999999999999996541 1333111 2345677777 5 5788999999999 8999
Q ss_pred EEEEEe--ccccccCCCCeEecc-CCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 253 EVSFTV--YEDFAHYKSGVYKHI-TGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 253 ~v~i~~--~~~f~~Y~~Giy~~~-~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|+|++ .++|++|++|||... ++...++|||+||||| +++|++||||
T Consensus 139 ~v~~~~~~~~~f~~Y~~gi~~~~~~~~~~~~HaV~iVGyg-~~~g~~ywiv 188 (222)
T 3f5v_A 139 AVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYS-NAQGVDYWIV 188 (222)
T ss_dssp EEEEEESCHHHHHTCCSSSCBCCCCSSSCEEEEEEEEEEE-EETTEEEEEE
T ss_pred EEEEEeccchhhhccCCCceecCCCCCCccCcEEEEEEEe-ccCCCEEEEE
Confidence 999998 368999999987544 4455689999999999 8889999997
No 31
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.8e-48 Score=333.91 Aligned_cols=170 Identities=28% Similarity=0.528 Sum_probs=144.8
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (212)
T 2cio_A 1 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQL 74 (212)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcccCCCC----CCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHH
Confidence 7999999997 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v~ 255 (300)
++++|+++|++|||.+.. +.|...+.. ...+++.+|. ++ .++++||++|++ |||+|+
T Consensus 75 i~~~Gi~~e~~yPY~~~~-------------~~C~~~~~~-------~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~ 133 (212)
T 2cio_A 75 VAQYGIHYRNTYPYEGVQ-------------RYCRSREKG-------PYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVV 133 (212)
T ss_dssp HHHTCBCBTTTSCCCSSC-------------CCCCTTTTC-------SCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEE
T ss_pred HHHhCcCcccccCCcCCC-------------CCcCCCCCC-------CceEEEeeEEEeCCccHHHHHHHHHh-CCEEEE
Confidence 999999999999996541 122221110 2235677776 65 478899999976 999999
Q ss_pred EEecc-ccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 256 FTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 256 i~~~~-~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+++. +|++|++|||++++.. .++|||+||||| + +||||
T Consensus 134 i~~~~~~f~~Y~~Gvy~~~~~~-~~~HaV~iVGyg-~----~yWiv 173 (212)
T 2cio_A 134 LEAAGKDFQLYRGGIFVGPCGN-KVDHAVAAVGYG-P----NYILI 173 (212)
T ss_dssp ECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEEE-T----TEEEE
T ss_pred EeccCcchhhcCCceecCCCCC-CCCEEEEEEEec-C----CeEEE
Confidence 99974 8999999999886654 469999999999 4 89997
No 32
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=1.9e-48 Score=332.68 Aligned_cols=167 Identities=29% Similarity=0.607 Sum_probs=144.5
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (208)
T 1o0e_A 1 LPEQIDWRKK----GAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQY 74 (208)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHH
Confidence 7999999998 789999999999999999999999999999999999999999999985 4689999999999999
Q ss_pred HHHc-CccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEE
Q 022267 178 FVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEV 254 (300)
Q Consensus 178 ~~~~-G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v 254 (300)
++++ |+++|++|||.+.. ..|+. . ...+++.+|. ++ .++++||++|++ |||+|
T Consensus 75 ~~~~~Gi~~e~~yPY~~~~-----------------~~C~~-~-----~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v 130 (208)
T 1o0e_A 75 IINNGGIDTQANYPYKAVQ-----------------GPCQA-A-----SKVVSIDGYNGVPFCNEXALKQAVAV-QPSTV 130 (208)
T ss_dssp HHHHTCBCBTTTSCCCSSC-----------------CCCCC-C-----CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEE
T ss_pred HHHhCCcCcccccCccCCC-----------------CcCCC-C-----CceEEeCeEEEeCCCCHHHHHHHHHh-CCEEE
Confidence 9997 99999999996541 23332 1 2235677776 65 478899999976 99999
Q ss_pred EEEecc-ccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 255 SFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 255 ~i~~~~-~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|+++. +|++|++|||++++.. .++|||+||||| + +||||
T Consensus 131 ~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg-~----~yWiv 171 (208)
T 1o0e_A 131 AIDASSAQFQQYSSGIFSGPCGT-KLNHGVTIVGYQ-A----NYWIV 171 (208)
T ss_dssp EECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEEC-S----SEEEE
T ss_pred EEEccCcccccccCceECCCCCC-cCCEEEEEEEeC-C----CeEEE
Confidence 999975 8999999999886654 469999999999 4 89997
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=7.3e-49 Score=342.54 Aligned_cols=174 Identities=28% Similarity=0.594 Sum_probs=147.8
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..|+
T Consensus 16 ~~lP~~~DwR~~----~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~--~~~gC~GG~~~~a~ 89 (241)
T 2oul_A 16 NFDHAAYDWRLH----SGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF--KNYGCNGGLINNAF 89 (241)
T ss_dssp CCCSSCEEGGGT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT--TSCTTBCBCHHHHH
T ss_pred ccCCCccccCcC----CCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHH
Confidence 469999999998 789999999999999999999999999999999999999999999986 26899999999999
Q ss_pred HHHHH-cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCE
Q 022267 176 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPV 252 (300)
Q Consensus 176 ~~~~~-~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV 252 (300)
+|+++ .|+++|++|||.+.. +. .|+.... ...+++.+|. +. .++++||++| |||
T Consensus 90 ~yi~~~~Gi~~e~~yPY~~~~-------------~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV 146 (241)
T 2oul_A 90 EDMIELGGICPDGDYPYVSDA-------------PN---LCNIDRC----TEKYGIKNYLSVPDNKLKEALRFL---GPI 146 (241)
T ss_dssp HHHHHTTSBCBTTSSCCCTTS-------------CC---CCCTTSS----SCCBCCSEEEECCTTCHHHHHHHT---CCE
T ss_pred HHHHHhCCcCccccCCCcCCC-------------CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCE
Confidence 99998 699999999996541 11 1332111 2345677776 65 4788999999 999
Q ss_pred EEEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCC----------CcCceec
Q 022267 253 EVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDD----------GEDYWVC 300 (300)
Q Consensus 253 ~v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~----------g~~YWiv 300 (300)
+|+|+++++|++|++|||++.+... ++|||+||||| +++ |++||||
T Consensus 147 ~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg-~~~~~~~~~~~~~g~~yWiv 202 (241)
T 2oul_A 147 SISVAVSDDFAFYKEGIFDGECGDQ-LNHAVMLVGFG-MKEIVNPLTKKGEKHYYYII 202 (241)
T ss_dssp EEEECBCHHHHTCCSSBCCSCBCSS-CCEEEEEEEEE-EEEEECTTTCSEEEEEEEEE
T ss_pred EEEEecCcchhhcCCcEEcCcCCCC-CCEEEEEEEec-cccccccccccCCCCCEEEE
Confidence 9999998899999999998855444 79999999999 654 7899997
No 34
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.1e-48 Score=335.66 Aligned_cols=171 Identities=28% Similarity=0.543 Sum_probs=143.9
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~ 74 (213)
T 3ioq_A 1 IPTSIDWRQK----GAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQY 74 (213)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCCCCcccC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHH
Confidence 7999999998 889999999999999999999999999999999999999999999986 4689999999999999
Q ss_pred HHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEEE
Q 022267 178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSF 256 (300)
Q Consensus 178 ~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~i 256 (300)
++++|+++|++|||.+.. +.|...+.. ...+++.+|. ++.++++++++++.+|||+++|
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~~C~~~~~~-------~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i 134 (213)
T 3ioq_A 75 VANSGIHLRQYYPYEGVQ-------------RQCRASQAK-------GPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVV 134 (213)
T ss_dssp HHHHCEEBGGGSCCCSSC-------------CCCCGGGCC-------SCEECCCEEEECCSSCHHHHHHHHTTSCEEEEE
T ss_pred HHHcCCCchhccCcCCCC-------------CCCCCCccC-------CceEEeccEEEeCCchHHHHHHHHHhCCEEEEE
Confidence 999999999999996541 222222211 2345677887 6654455555666789999999
Q ss_pred Eec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 257 TVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 257 ~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
+++ ++|++|++|||..++ ...++|||+||||| + +||||
T Consensus 135 ~~~~~~f~~y~~Giy~~~~-~~~~~HaV~iVGyg-~----~yWiv 173 (213)
T 3ioq_A 135 EAKGRAFQNYRGGIFAGPC-GTSIDHAVAAVGYG-N----DYILI 173 (213)
T ss_dssp CCCSHHHHTCCSSEECCSC-CSCCCEEEEEEEEE-T----TEEEE
T ss_pred EechhhhhhccCCeEcCCC-CCccCceEEEEecC-C----CeEEE
Confidence 997 799999999998854 44579999999999 4 89997
No 35
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.5e-48 Score=333.34 Aligned_cols=170 Identities=33% Similarity=0.625 Sum_probs=145.6
Q ss_pred CCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 022267 98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY 177 (300)
Q Consensus 98 lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~ 177 (300)
||++||||++ |.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..||+|
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y 74 (214)
T 2bdz_A 1 YPESIDWREK----GAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQY 74 (214)
T ss_dssp CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred CCCcEeCCCC----CCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHH
Confidence 6999999998 789999999999999999999999999999999999999999999986 3689999999999999
Q ss_pred HHHcCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCEEEE
Q 022267 178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS 255 (300)
Q Consensus 178 ~~~~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV~v~ 255 (300)
++++|+++|++|||.+.. + .|..... ....+++.+|. ++ .++++||++|++ |||+|+
T Consensus 75 ~~~~Gi~~e~~yPY~~~~-------------~----~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~ 133 (214)
T 2bdz_A 75 VVDNGVHTEREYPYEKKQ-------------G----RCRAKDK---KGPKVYITGYKYVPANDEISLIQAIAN-QPVSVV 133 (214)
T ss_dssp HHHHCEEBTTTSCCCSSC-------------C----CCCTTTC---CSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEE
T ss_pred HHHhCCCccccCCCCCCC-------------C----CCCCCCC---CCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEE
Confidence 999999999999996542 1 2222110 02345677776 64 578899999987 999999
Q ss_pred EEec-cccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 256 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 256 i~~~-~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
|+++ ++|++|++|||+.++.. .++|||+||||| + +||||
T Consensus 134 i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg-~----~yWiv 173 (214)
T 2bdz_A 134 TDSRGRGFQFYKGGIYEGPCGT-NTDHAVTAVGYG-K----TYLLL 173 (214)
T ss_dssp ECCCSHHHHTCCSSEECCSCCS-CCCEEEEEEEEC-S----SEEEE
T ss_pred EeeChhHhhcccCceecCCCCC-CCCeEEEEEEcC-C----CeEEE
Confidence 9998 69999999999886654 479999999999 4 89997
No 36
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.1e-48 Score=341.77 Aligned_cols=174 Identities=29% Similarity=0.602 Sum_probs=147.9
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+||++..|+
T Consensus 18 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~ 91 (243)
T 3bwk_A 18 KLDRIAYDWRLH----GGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSV--KNNGCYGGYITNAF 91 (243)
T ss_dssp CCCCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT--TSCGGGCCCHHHHH
T ss_pred ccCCCceecCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHH
Confidence 469999999998 789999999999999999999999999999999999999999999986 26899999999999
Q ss_pred HHHHH-cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCE
Q 022267 176 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPV 252 (300)
Q Consensus 176 ~~~~~-~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV 252 (300)
+|+++ .|+++|++|||.+.. +. .|+.... ...+++.+|. ++ .++++||++| |||
T Consensus 92 ~y~~~~~Gi~~e~~yPY~~~~-------------~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV 148 (243)
T 3bwk_A 92 DDMIDLGGLCSQDDYPYVSNL-------------PE---TCNLKRC----NERYTIKSYVSIPDDKFKEALRYL---GPI 148 (243)
T ss_dssp HHHHHTTSBCBTTTSCCCTTS-------------CC---CCCGGGC----SSCBCCCEEEECCTTCHHHHHHHT---CCE
T ss_pred HHHHHhCCcccccccCCcCCC-------------CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCE
Confidence 99998 699999999996541 11 1332111 2345677776 65 4889999999 999
Q ss_pred EEEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCC----------CcCceec
Q 022267 253 EVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDD----------GEDYWVC 300 (300)
Q Consensus 253 ~v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~----------g~~YWiv 300 (300)
+|+|+++++|++|++|||+..+... ++|||+||||| +++ |++||||
T Consensus 149 ~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg-~~~~~~~~~~~~~g~~yWiv 204 (243)
T 3bwk_A 149 SISIAASDDFAFYRGGFYDGECGAA-PNHAVILVGYG-MKDIYNEDTGRMEKFYYYII 204 (243)
T ss_dssp EEEECCCHHHHTCCSSSCCCCCCSS-CCEEEEEEEEE-EEEEECTTTCSEEEEEEEEE
T ss_pred EEEEecChhHHhcCCceecCCCCCc-CCeEEEEEEec-CccccccccccCCCCCEEEE
Confidence 9999998899999999998855444 89999999999 654 7899997
No 37
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.1e-48 Score=338.27 Aligned_cols=177 Identities=28% Similarity=0.608 Sum_probs=149.7
Q ss_pred CCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHH
Q 022267 96 LKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAW 175 (300)
Q Consensus 96 ~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~ 175 (300)
.+||++||||++ +.|+||||||.||||||||++++||++++++++..++||+|+|+||+....+.||+||++..|+
T Consensus 5 ~~lP~~~Dwr~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~ 80 (224)
T 3f75_A 5 SELPAGVDWRSR----GCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAF 80 (224)
T ss_dssp GGSCSCEEHHHH----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHH
T ss_pred cCCCCceecccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHH
Confidence 469999999998 7899999999999999999999999999999999999999999999863346899999999999
Q ss_pred HHHHH-cCccCCCCcCCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eC-CCHHHHHHHHHHcCCE
Q 022267 176 RYFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPV 252 (300)
Q Consensus 176 ~~~~~-~G~~~e~~yPY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~GPV 252 (300)
+|+++ .|+++|++|||.+.. ..|..... ....++.+|. +. .++++||++|+ +|||
T Consensus 81 ~~~~~~~Gi~~e~~yPY~~~~-----------------~~C~~~~~----~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV 138 (224)
T 3f75_A 81 QYVLDSGGICSEDAYPYLARD-----------------EECRAQSC----EKVVKILGFKDVPRRSEAAMKAALA-KSPV 138 (224)
T ss_dssp HHHHHHTCBCBTTTSCCCSSC-----------------CCCCGGGS----CCCBCCSEEEECCSSCHHHHHHHHH-HSCE
T ss_pred HHHHHhCCccccccCCCcCCC-----------------CCCCcCCC----CceEEeccEEEeCCChHHHHHHHHc-CCCE
Confidence 99998 799999999996541 12332211 1224466776 54 57889999998 8999
Q ss_pred EEEEEecc-ccccCCCCeEeccCCCCCCCcEEEEEEecCCC--CCcCceec
Q 022267 253 EVSFTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSD--DGEDYWVC 300 (300)
Q Consensus 253 ~v~i~~~~-~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~--~g~~YWiv 300 (300)
+++|++.. +|++|++|||+ +.+...++|||+||||| ++ +|++||||
T Consensus 139 ~v~i~~~~~~f~~y~~Giy~-~~~~~~~~Hav~iVGyg-~~~~~g~~ywiv 187 (224)
T 3f75_A 139 SIAIEADQMPFQFYHEGVFD-ASCGTDLDHGVLLVGYG-TDKESKKDFWIM 187 (224)
T ss_dssp EEEECCCSHHHHTEEEEEEC-CCCCCCCCEEEEEEEEE-EETTTTEEEEEE
T ss_pred EEEEeccchhhhcCccceEC-CCCCCccCeEEEEEEEe-cccCCCCCEEEE
Confidence 99999974 89999999998 44455689999999999 55 88999997
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=4.9e-48 Score=343.53 Aligned_cols=190 Identities=33% Similarity=0.707 Sum_probs=154.6
Q ss_pred CCCCCCccccCCCCCCCCCCCcccCCC---CCccHHHHHHHHHHHHHHHHHhC-C--CcccCHHHHHHhcCCCCCCCCCC
Q 022267 95 SLKLPKSFDARSAWPQCSTISRILDQG---HCGSCWAFGAVEALSDRFCIHFG-M--NLSLSVNDLLACCGFLCGDGCDG 168 (300)
Q Consensus 95 ~~~lP~~~D~R~~w~~~~~v~~v~dQg---~CgsCwAfa~~~~le~~~~i~~~-~--~~~lS~q~l~dC~~~~~~~gC~G 168 (300)
..+||++||||+++ ..++|+|||||| .||||||||++++||++++|+++ . .+.||+|+|+||+. ..||+|
T Consensus 33 ~~~lP~~~DwR~~~-~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~G 108 (277)
T 1deu_A 33 PADLPKSWDWRNVD-GVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEG 108 (277)
T ss_dssp GGGSCSCEETTSBT-TBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBE
T ss_pred cccCCCceecccCC-CCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCC
Confidence 35799999999972 335699999999 99999999999999999999976 3 48999999999986 379999
Q ss_pred CChHHHHHHHHHcCccCCCCcCCCCCC-CCCC-CCCCCCCCCcccc--ccccccccccccceeeEeeeEE-eCCCHHHHH
Q 022267 169 GYPISAWRYFVHHGVVTEECDPYFDST-GCSH-PGCEPAYPTPKCV--RKCVKKNQLWRNSKHYSISAYR-INSDPEDIM 243 (300)
Q Consensus 169 G~~~~a~~~~~~~G~~~e~~yPY~~~~-~c~~-~~~~~~~~~~~c~--~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik 243 (300)
|++..||+|++++|+++|++|||.+.. .|.. ..| ..|. ..|.... ....+++..|. +. ++++||
T Consensus 109 G~~~~a~~yi~~~Gi~~e~~yPY~~~~~~C~~~~~~------~~~~~~~~c~~~~----~~~~~~i~~y~~v~-~~~~i~ 177 (277)
T 1deu_A 109 GNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFNQC------GTCNEFKECHAIR----NYTLWRVGDYGSLS-GREKMM 177 (277)
T ss_dssp ECHHHHHHHHHHTCBCBGGGSCCCSSCCCCCHHHHS------EEEEETTEEEECS----SCCCBCEEEEEEEC-SHHHHH
T ss_pred CCHHHHHHHHHHcCCCcCccCCCcCCCCCccccccc------cccccCccccccc----CcceEEeceeEecC-CHHHHH
Confidence 999999999999999999999997652 2431 111 0111 1232211 12345677777 54 688999
Q ss_pred HHHHHcCCEEEEEEeccccccCCCCeEeccCCCCCCCcEEEEEEecCCCCCcCceec
Q 022267 244 AEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 244 ~~l~~~GPV~v~i~~~~~f~~Y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~YWiv 300 (300)
++|+++|||+|+|+++++|++|++|||+.+++...++|||+||||| +++|++||||
T Consensus 178 ~~i~~~GPV~v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg-~~~g~~YWiv 233 (277)
T 1deu_A 178 AEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWG-ISDGTEYWIV 233 (277)
T ss_dssp HHHHHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEE-EETTEEEEEE
T ss_pred HHHHHcCCEEEEEecccccccCcCcEECCCCCCCcCCeEEEEEEec-ccCCccEEEE
Confidence 9999999999999998899999999999877766689999999999 7789999997
No 39
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=6.8e-46 Score=332.37 Aligned_cols=228 Identities=21% Similarity=0.224 Sum_probs=167.5
Q ss_pred ceEEecCCCCCCCCHHHHHHhhCCCCCCCCCCCCCCccccCCCCCCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHH
Q 022267 53 GWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAV 132 (300)
Q Consensus 53 ~~~~~~n~~fsd~t~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~ 132 (300)
+.....| ++.++..|.|+..+|..+.+................+||++||||++ + ||||||.||||||||++
T Consensus 13 ~~~~~~~-~~~~~~~~~~~~~lG~~p~~~d~rd~~~~~~~~~~~~lP~s~DwR~~----~---pVkdQG~CGSCWAFAa~ 84 (291)
T 3ois_A 13 GLVPRGS-HMQTVLKRRKKSGYGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPP----F---QVYDQGRIGSCTANALA 84 (291)
T ss_dssp -----------CCCCCCCCTTCCEECCCCCTTCCBCCCCHHHHHTCCSEEECCCS----S---CCCBCTTSSCHHHHHHH
T ss_pred Ccccchh-hHhHhhhccccccCCCCCCCCcccccccCCCccccccCCcceecccC----C---CcccCCCCccHHHHHHH
Confidence 3444556 89999999999988888766654432211111112479999999986 3 99999999999999999
Q ss_pred HHHHHHHHHHhCCCcccCHHHHH--HhcCC--CCCCCCCCCChHHHHHHHHHcCccCCCCcCCCCC----CCCCCCCCCC
Q 022267 133 EALSDRFCIHFGMNLSLSVNDLL--ACCGF--LCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDS----TGCSHPGCEP 204 (300)
Q Consensus 133 ~~le~~~~i~~~~~~~lS~q~l~--dC~~~--~~~~gC~GG~~~~a~~~~~~~G~~~e~~yPY~~~----~~c~~~~~~~ 204 (300)
++||++++ +++..+.||+|+|+ +|... .+..+|.||++..||+|++++|+++|++|||.+. +.|..+.+..
T Consensus 85 ~alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 85 AAIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhCCCCCCcccccccccccccc
Confidence 99999985 46777899999998 68641 2234688999999999999999999999999765 2465532211
Q ss_pred CCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEEEEeccccccCCC--CeEeccCCC--CCC
Q 022267 205 AYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKS--GVYKHITGD--VMG 279 (300)
Q Consensus 205 ~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~i~~~~~f~~Y~~--Giy~~~~~~--~~~ 279 (300)
. +..+...|... ...+++.+|. ++.++++||++|+++|||+++|+++++|+.|++ |||..+++. ..+
T Consensus 164 ~--~~~p~~~C~~~------~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~ 235 (291)
T 3ois_A 164 A--SKKPSDQCYKD------AQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEG 235 (291)
T ss_dssp G--GSCCCHHHHHH------HGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEE
T ss_pred c--cCCCCHHHHhh------cccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcC
Confidence 1 11123345432 2345677887 777999999999999999999999989999998 999887653 236
Q ss_pred CcEEEEEEecCCCCCcCceec
Q 022267 280 GHAVKLIGWGTSDDGEDYWVC 300 (300)
Q Consensus 280 ~Hav~iVGyg~~~~g~~YWiv 300 (300)
+|||+||||| +|++||||
T Consensus 236 ~Hav~iVGy~---~~~~ywiv 253 (291)
T 3ois_A 236 GHAVLCVGYD---DEIRHFRI 253 (291)
T ss_dssp EEEEEEEEEE---TTTTEEEE
T ss_pred CeEEEEEEEe---CCCCEEEE
Confidence 9999999999 46889997
No 40
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=1.7e-41 Score=300.30 Aligned_cols=194 Identities=22% Similarity=0.360 Sum_probs=133.7
Q ss_pred CccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCCCCCCCCCCCC-hHHHHHHH
Q 022267 100 KSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGY-PISAWRYF 178 (300)
Q Consensus 100 ~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~-~~~a~~~~ 178 (300)
.-.|||+. ++|-.++||||||.||||||||++++||++++++++..+.||+|+|+||+....+.||+||. +..++.|+
T Consensus 9 ~~~dWR~~-~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i 87 (265)
T 2wbf_X 9 YCNRLKDE-NNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQII 87 (265)
T ss_dssp CBCGGGCT-TSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHH
T ss_pred HHHhhccC-CCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHH
Confidence 34699985 44523349999999999999999999999999998899999999999998643468999996 45556888
Q ss_pred HHcC-ccCCCCcCCCCC---CCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCC-----C----HHHHHH
Q 022267 179 VHHG-VVTEECDPYFDS---TGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-----D----PEDIMA 244 (300)
Q Consensus 179 ~~~G-~~~e~~yPY~~~---~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~-----~----~~~ik~ 244 (300)
+++| +++|++|||... ..|......-. ....+...|.... ....+++.+|. +.. + +++||+
T Consensus 88 ~~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~ 162 (265)
T 2wbf_X 88 EDYGFLPAESNYPYNYVKVGEQCPKVEDHWM-NLWDNGKILHNKN----EPNSLDGKGYTAYESERFHDNMDAFVKIIKT 162 (265)
T ss_dssp HHHCCCCBTTTSCCCGGGTTSCCCCCCTTCC-CTTTTCEECCCCC----SSSTTCCSSEEEEEGGGGTTCHHHHHHHHHH
T ss_pred HHcCCCCCccccCCcCCCCCCCCCCcccccc-ccccccccccccC----CCceeecCCceEeeccccccchhhHHHHHHH
Confidence 8887 899999999642 33543211000 0000000010000 01112344554 322 3 378999
Q ss_pred HHHHcCCEEEEEEeccccccCC-CCeE-eccCCCCCCCcEEEEEEecCC--CCC--cCceec
Q 022267 245 EIYKNGPVEVSFTVYEDFAHYK-SGVY-KHITGDVMGGHAVKLIGWGTS--DDG--EDYWVC 300 (300)
Q Consensus 245 ~l~~~GPV~v~i~~~~~f~~Y~-~Giy-~~~~~~~~~~Hav~iVGyg~~--~~g--~~YWiv 300 (300)
+|+++|||+|+|++. +|+.|+ +|+| ...++...++|||+|||||++ ++| ++||||
T Consensus 163 ~i~~~GPV~v~i~~~-~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWiv 223 (265)
T 2wbf_X 163 EVMNKGSVIAYIKAE-NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIV 223 (265)
T ss_dssp HHHHHSCEEEEECGG-GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEE
T ss_pred HHHhcCCEEEEEEcc-cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEE
Confidence 999999999999984 687774 4443 234444468999999999942 466 689997
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.97 E-value=7.1e-32 Score=250.98 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=82.7
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHH-hCCCcccCH----------------HHHHHhcC
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIH-FGMNLSLSV----------------NDLLACCG 159 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~-~~~~~~lS~----------------q~l~dC~~ 159 (300)
..|..|+++.. ..++||+|||+||+|||||+++++|+.++++ ++..+.||+ |+|+||+.
T Consensus 47 ~~~~~F~~~~~----~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~ 122 (453)
T 2cb5_A 47 RAQHVFQHAVP----QEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQ 122 (453)
T ss_dssp HCCCCCSEECS----CCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceeeeec----cCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 45778888876 5599999999999999999999999999998 568999999 99999985
Q ss_pred C------------CCCCCCCCCChHHHHHHHHHcCccCCCCcCCCC
Q 022267 160 F------------LCGDGCDGGYPISAWRYFVHHGVVTEECDPYFD 193 (300)
Q Consensus 160 ~------------~~~~gC~GG~~~~a~~~~~~~G~~~e~~yPY~~ 193 (300)
. ..+.||+||....+++|+++.|++++++|||+.
T Consensus 123 ~~~~~d~R~v~~l~~~~gcdGG~~~~a~~~i~kyGl~p~~~yP~~~ 168 (453)
T 2cb5_A 123 RKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESY 168 (453)
T ss_dssp TTCCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGSCCCT
T ss_pred ccCCcchhhHHHhcCCCCCCCCChHHHHHHHHHcCccchhhccccc
Confidence 2 135799999999999999999999999999965
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=99.97 E-value=4.1e-31 Score=246.12 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=69.8
Q ss_pred CCCCccccCCCCCCCCCCCcccCCCCCccHHHHHHHHHHHHHHHHH-hCCCcccCH----------------HHHHHhcC
Q 022267 97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIH-FGMNLSLSV----------------NDLLACCG 159 (300)
Q Consensus 97 ~lP~~~D~R~~w~~~~~v~~v~dQg~CgsCwAfa~~~~le~~~~i~-~~~~~~lS~----------------q~l~dC~~ 159 (300)
..|..|+++.. +.++||||||+||+|||||+++++|+.++++ ++..++||+ |+|+||+.
T Consensus 52 ~~~~~F~~~~~----~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~ 127 (457)
T 2e01_A 52 QDNRVFNTVVS----TDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSAD 127 (457)
T ss_dssp HCCCCCSEECC----------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCceEEEec----CCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcC
Confidence 35667887765 5599999999999999999999999999998 778999999 78899975
Q ss_pred CC----------CCCCCCCCChHHHHHHHHHcCccCCCCcCC
Q 022267 160 FL----------CGDGCDGGYPISAWRYFVHHGVVTEECDPY 191 (300)
Q Consensus 160 ~~----------~~~gC~GG~~~~a~~~~~~~G~~~e~~yPY 191 (300)
.. .+.||+||....+++|++++|++++++|||
T Consensus 128 ~~~~~r~v~~l~~~~gcdGG~~~~a~~~i~kyGivpe~~yP~ 169 (457)
T 2e01_A 128 QDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLYGD 169 (457)
T ss_dssp SCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGSCS
T ss_pred CcccchhhhhhccCCCCCCCCHHHHHHHHHHcCccchhhcCC
Confidence 21 368999999999999999999999999999
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.93 E-value=3.8e-26 Score=208.33 Aligned_cols=77 Identities=19% Similarity=0.156 Sum_probs=71.8
Q ss_pred CCcccCCCCCccHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHhcCC----------CCCCCCCCCChHHHHHHHHHcCc
Q 022267 114 ISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGF----------LCGDGCDGGYPISAWRYFVHHGV 183 (300)
Q Consensus 114 v~~v~dQg~CgsCwAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~----------~~~~gC~GG~~~~a~~~~~~~G~ 183 (300)
++||||||+||+|||||+++++|+.++++++..+.||+|+|+||+.. ..+.||+||....|++|++++|+
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~Gi 101 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGL 101 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHTCC
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHcCc
Confidence 89999999999999999999999999999899999999999999741 12479999999999999999999
Q ss_pred cCCCCcC
Q 022267 184 VTEECDP 190 (300)
Q Consensus 184 ~~e~~yP 190 (300)
+++++||
T Consensus 102 vpe~~YP 108 (383)
T 3pw3_A 102 VPEEEMR 108 (383)
T ss_dssp CBGGGSC
T ss_pred CcHHhCC
Confidence 9999999
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=98.62 E-value=1.7e-08 Score=75.54 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=43.2
Q ss_pred ccccc-hhhhccccccChHH--HHHHHHcCCCCceEEecCCCCCCCCHHHHHH-hhCCC
Q 022267 23 FAEGV-VSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKH-LLGVK 77 (300)
Q Consensus 23 ~~~~~-~~~~~~~~~i~~~~--~i~~~N~~~~~~~~~~~n~~fsd~t~~Ef~~-~~~~~ 77 (300)
.+.|. ..|...|+.||.++ +|+++|+. +.+|++|+| +|+|||.+||++ ++|.+
T Consensus 33 ~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN-~FaDLT~eEF~~~~lg~~ 89 (106)
T 3f75_P 33 AKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMN-HFGDLSRDEFRRKYLGFK 89 (106)
T ss_dssp TCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCC-TTTTCCHHHHHHHSCCBC
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCc-ccccCCHHHHHHHHcCCC
Confidence 44444 46777899999996 59999986 789999999 999999999998 45544
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=98.50 E-value=4.4e-08 Score=69.78 Aligned_cols=55 Identities=24% Similarity=0.260 Sum_probs=41.9
Q ss_pred ccccc-chhhhccccccChHH--HHHHHHcC---CCCceEEecCCCCCCCCHHHHHHhhCCCC
Q 022267 22 TFAEG-VVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKHLLGVKP 78 (300)
Q Consensus 22 ~~~~~-~~~~~~~~~~i~~~~--~i~~~N~~---~~~~~~~~~n~~fsd~t~~Ef~~~~~~~~ 78 (300)
+.+.| +..|...| .||.++ .|++||++ +..+|++|+| +|+|||.+||..++|.++
T Consensus 17 ~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N-~FaDlT~eEf~~~~g~~~ 77 (80)
T 2l95_A 17 FDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGIN-HLADLTPEEFAQRSGKKV 77 (80)
T ss_dssp HTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCC-GGGTSSHHHHHHHHTSCC
T ss_pred hCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCc-ccccCCHHHHHHHhCCCC
Confidence 34555 44577778 999985 59999985 2578999999 999999999933666543
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.80 E-value=0.0089 Score=47.86 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=73.2
Q ss_pred CCCCCccHHHHHHHHHHHHHHHH--------HhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHHHHHcCccCCCCcC
Q 022267 119 DQGHCGSCWAFGAVEALSDRFCI--------HFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDP 190 (300)
Q Consensus 119 dQg~CgsCwAfa~~~~le~~~~i--------~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~G~~~e~~yP 190 (300)
.||+-+=|-+|+.++.|-+.... .+...+.+|+|+|.++ |..+...++|++..|....
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t----------~~~~~q~Iky~~s~G~~~~---- 91 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC----------ATFPNQMIEYGKSQGRDIH---- 91 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC----------CBCHHHHHHHHHHTTCCCE----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc----------CCCHHHHHHHHHHcCcChh----
Confidence 68888999999999887766421 1113466777777664 4578899999876553210
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEEEEe-ccccccCCCC
Q 022267 191 YFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSG 268 (300)
Q Consensus 191 Y~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~i~~-~~~f~~Y~~G 268 (300)
+. -..+.+++++.+-++-|+.+.-.- ++
T Consensus 92 ------------------------------------------~~nr~ls~neV~~~i~~Nk~I~v~~~~v~e-------- 121 (183)
T 1pxv_A 92 ------------------------------------------YQEGVPSYNQVDQLTKDNVGIMILAQSVSQ-------- 121 (183)
T ss_dssp ------------------------------------------EEESCCCHHHHHHHHHTTCCEEEEEECCCS--------
T ss_pred ------------------------------------------HhcCCCCHHHHHHHHhcCCcEEEEcccccc--------
Confidence 01 123558999999999999887762 22
Q ss_pred eEeccCCCCCCCcEEEEEEecCCCCCcCc
Q 022267 269 VYKHITGDVMGGHAVKLIGWGTSDDGEDY 297 (300)
Q Consensus 269 iy~~~~~~~~~~Hav~iVGyg~~~~g~~Y 297 (300)
..+. ...+||++||||- ..++.+|
T Consensus 122 ---~~~~-~~~gHA~av~Gya-~~~~~~~ 145 (183)
T 1pxv_A 122 ---NPND-PHLGHALAVVGNA-KINDQEK 145 (183)
T ss_dssp ---STTS-CCCEEEEEEEEEE-EETTEEE
T ss_pred ---CCCC-ccCceeEEEEeee-ecCCCeE
Confidence 1111 1358999999998 5446544
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.57 E-value=0.055 Score=43.17 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=75.6
Q ss_pred CCCCCccHHHHHHHHHHHHHHH--------HHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHHHHHcCccCCCCcC
Q 022267 119 DQGHCGSCWAFGAVEALSDRFC--------IHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDP 190 (300)
Q Consensus 119 dQg~CgsCwAfa~~~~le~~~~--------i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~G~~~e~~yP 190 (300)
.||.-+=|-+|+.++.|-+... +.+...+.+|+++|..+. ..+...++|++..|- .-
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~----------~t~~e~iky~~s~g~-~~---- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG----------LTPREMIYFGQTQGR-SP---- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC----------CCHHHHHHHHHHTTC-CC----
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC----------CCHHHHHHHHHHcCC-Ch----
Confidence 6888899999999998876642 112245789999999653 367889999877653 10
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEE-eCCCHHHHHHHHHHcCCEEEEEEeccccccCCCCe
Q 022267 191 YFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGV 269 (300)
Q Consensus 191 Y~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~GPV~v~i~~~~~f~~Y~~Gi 269 (300)
.+. -..+.+++++++.++-|+.+..+--+ ..
T Consensus 82 -----------------------------------------~~~n~~ls~~eV~~~~~~nk~i~i~~~~ve----~~--- 113 (174)
T 1cv8_A 82 -----------------------------------------QLLNRMTTYNEVDNLTKNNKGIAILGSRVE----SR--- 113 (174)
T ss_dssp -----------------------------------------EEESSCCCHHHHHHHHHTTCCEEEEEEESS----CB---
T ss_pred -----------------------------------------hhhcCCCCHHHHHHHHhcCCceEEEccccc----CC---
Confidence 000 12355889999999899988776421 11
Q ss_pred EeccCCCCCCCcEEEEEEecCCCCCcCce
Q 022267 270 YKHITGDVMGGHAVKLIGWGTSDDGEDYW 298 (300)
Q Consensus 270 y~~~~~~~~~~Hav~iVGyg~~~~g~~YW 298 (300)
+. ...+||++||||-...+|.+|.
T Consensus 114 ----~~-~~~gHAlav~Gy~~~~ng~~~y 137 (174)
T 1cv8_A 114 ----NG-MHAGHAMAVVGNAKLNNGQEVI 137 (174)
T ss_dssp ----TT-BCCEEEEEEEEEEEETTSCEEE
T ss_pred ----CC-CCCceeEEEEeeeeecCCceEE
Confidence 11 2358999999998445666643
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.46 E-value=0.026 Score=50.00 Aligned_cols=112 Identities=16% Similarity=0.124 Sum_probs=73.0
Q ss_pred cCCCCCccHHHHHHHHHHHHHHH--------HHhCCCcccCHHHHHHhcCCCCCCCCCCCChHHHHHHHHHcCccCCCCc
Q 022267 118 LDQGHCGSCWAFGAVEALSDRFC--------IHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD 189 (300)
Q Consensus 118 ~dQg~CgsCwAfa~~~~le~~~~--------i~~~~~~~lS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~G~~~e~~y 189 (300)
..||.-+=|-+|+.++.|-+... |.+...+.+|+++|.++ |..+...++|++..|..
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t----------s~~~~q~Iky~qsyG~~----- 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC----------ATFPNQMIEYGKSQGRD----- 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC----------CCCHHHHHHHHHHTTEE-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc----------CCCHHHHHHHHHHhCcc-----
Confidence 36899899999999988765531 11113456677777663 44688899998765531
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccccccccccceeeEeeeEEeCCCHHHHHHHHHHcCCEEEEEEec-cccccCCCC
Q 022267 190 PYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSG 268 (300)
Q Consensus 190 PY~~~~~c~~~~~~~~~~~~~c~~~C~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~GPV~v~i~~~-~~f~~Y~~G 268 (300)
+.-..-..+.+++++.+-++-|+.|.+.-. +. ..
T Consensus 266 ----------------------------------------~~~~n~~ls~deVk~~id~Nk~I~v~~~~v~~~----~n- 300 (367)
T 1x9y_A 266 ----------------------------------------IHYQEGVPSYNQVDQLTKDNVGIMILAQSVSQN----PN- 300 (367)
T ss_dssp ----------------------------------------EEEEESCCCHHHHHHHHHTTCCEEEEEEETTSC----SS-
T ss_pred ----------------------------------------hhhhcCCCCHHHHHHHHhcCCcEEEEccccccC----CC-
Confidence 010111245688999999999999988753 21 11
Q ss_pred eEeccCCCCCCCcEEEEEEecCCCCCcCc
Q 022267 269 VYKHITGDVMGGHAVKLIGWGTSDDGEDY 297 (300)
Q Consensus 269 iy~~~~~~~~~~Hav~iVGyg~~~~g~~Y 297 (300)
+ ...+||++||||- ..++.+|
T Consensus 301 ------~-~~~gHAlavvGyA-~~~~~~~ 321 (367)
T 1x9y_A 301 ------D-PHLGHALAVVGNA-KINDQEK 321 (367)
T ss_dssp ------S-CCCSEEEEEEEEE-EETTEEE
T ss_pred ------C-ccCceeEEEEecc-ccCCCcE
Confidence 1 1358999999997 4445554
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=83.06 E-value=1.3 Score=37.38 Aligned_cols=49 Identities=20% Similarity=0.384 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHcCCEEEEEEec-c-----ccccC--CCCeEeccCCCCCCCcEEEEEEec
Q 022267 237 SDPEDIMAEIYKNGPVEVSFTVY-E-----DFAHY--KSGVYKHITGDVMGGHAVKLIGWG 289 (300)
Q Consensus 237 ~~~~~ik~~l~~~GPV~v~i~~~-~-----~f~~Y--~~Giy~~~~~~~~~~Hav~iVGyg 289 (300)
.+.++|+++|.+.-||+|-.+.. . .|..+ .+|-..- ...+|+|+|+||+
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~----~~~~H~VVl~GYd 186 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI----TYNEHCVVLIGYD 186 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE----CTTEEEEEEEEEC
T ss_pred CCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee----ccCCeEEEEEEEe
Confidence 47899999999888999977652 1 12111 1232211 1247999999999
No 50
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=22.64 E-value=14 Score=27.89 Aligned_cols=10 Identities=40% Similarity=1.255 Sum_probs=8.5
Q ss_pred CCCCCccHHH
Q 022267 119 DQGHCGSCWA 128 (300)
Q Consensus 119 dQg~CgsCwA 128 (300)
|.-.||+||-
T Consensus 56 ns~~CGtC~~ 65 (127)
T 3suj_A 56 NSPNCGSCYQ 65 (127)
T ss_dssp TCTTTTCEEE
T ss_pred CCCCCCceEE
Confidence 7789999994
No 51
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=20.37 E-value=15 Score=27.35 Aligned_cols=18 Identities=22% Similarity=0.935 Sum_probs=12.1
Q ss_pred CCCCccc--CCCCCccHHHH
Q 022267 112 STISRIL--DQGHCGSCWAF 129 (300)
Q Consensus 112 ~~v~~v~--dQg~CgsCwAf 129 (300)
|-...|. |.-.||+||-.
T Consensus 47 Gg~~~i~gwns~~CGtC~~l 66 (120)
T 3m3g_A 47 GGAAAVAGWNSASCGTCWKL 66 (120)
T ss_dssp EEETTCCSTTCTTTTCEEEE
T ss_pred ccccccccCCCCCCCceEEE
Confidence 3344444 77899999943
No 52
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=20.22 E-value=37 Score=22.86 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=19.5
Q ss_pred CCcccCCCCCccHHHHHHHHHHHHHHHH
Q 022267 114 ISRILDQGHCGSCWAFGAVEALSDRFCI 141 (300)
Q Consensus 114 v~~v~dQg~CgsCwAfa~~~~le~~~~i 141 (300)
+--|+=||.|++| ......+|..++-
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 4578899999999 3444688887654
Done!