BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022269
(300 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 230 bits (587), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 164/258 (63%), Gaps = 1/258 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F SGKT+S +R+ QL++L +M+NE I AL DL K E S EVA +
Sbjct: 7 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 66
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
+ + +KEL W E + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 67 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 126
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
A+AAGNA++LKPSEV+ + LLA L+ +YMD + VV+G V ET+ LL +++D I YT
Sbjct: 127 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 186
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +IVMAAAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 187 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQTCVA 245
Query: 263 PDHIITTKDYAPKLVRLL 280
PD+I+ ++V L
Sbjct: 246 PDYILCDPSIQNQIVEKL 263
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 165/258 (63%), Gaps = 1/258 (0%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82
VK R F+SG+T+ +R+ QL++L +++ E+E ++V AL DL K E + EV +
Sbjct: 24 VKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYV 83
Query: 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVG 142
I+ +++L W E + + T I EP GVVL+I WNYPF L++ P+VG
Sbjct: 84 LEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVG 143
Query: 143 AIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYT 202
AIAAGNA+VLKPSE++ +SLLA ++ +Y+D V+ G V ET+ LL +++D I YT
Sbjct: 144 AIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKERFDHILYT 203
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G++ V +I+M AAAKHLTPV LELGGKSP D +L VACRR+ GK+ N+GQ C++
Sbjct: 204 GSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF-MNSGQTCVA 262
Query: 263 PDHIITTKDYAPKLVRLL 280
PD+I+ ++V L
Sbjct: 263 PDYILCDPSIQNQIVEKL 280
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 149/263 (56%), Gaps = 2/263 (0%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 183
II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 184 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 244 CRRMIMGKWGCNNGQACISPDHI 266
+++ GK+ N+GQ CI+PD++
Sbjct: 255 VNQLMFGKF-INSGQTCIAPDYL 276
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 148/263 (56%), Gaps = 2/263 (0%)
Query: 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63
+++ K N + A+ SLF + + FA+ T G+R L+ L + + + + AL
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQ-KAYFATRATADVGFRKQSLERLKEAVINNKEALYSAL 74
Query: 64 RQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVV 123
+DL KP+ + E+ + I AL L W+ P + PS +V EP+GV
Sbjct: 75 AEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 183
II P+NYP L+L P++GAI GN ++KPSE P +S+++ K++ E + V++G
Sbjct: 135 YIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAVIQG 194
Query: 184 AVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
E S LL +D I +TG+ V ++VM AAAKHLTPV+LELGGK P++ +L
Sbjct: 195 GRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 244 CRRMIMGKWGCNNGQACISPDHI 266
+++ GK+ N+GQ I+PD++
Sbjct: 255 VNQLMFGKF-INSGQTXIAPDYL 276
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 25/251 (9%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHW--MT 98
R++ L+ + + R + +AL D + L ++ E I S L + W +
Sbjct: 52 RITTLQQWKQAILSRREQLTEALVNDTGR--LSITVLE-------IDSFLASIDRWCGLA 102
Query: 99 PEKAKTSI--TTFPSSA---EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
PE +TS T+ P A +VP P +V +ISPWN+P LS + A+ AG A+V+K
Sbjct: 103 PELLQTSAKNTSIPFIALQQSLVPYP--LVGVISPWNFPLTLSXIDTIPALLAGCAVVVK 160
Query: 154 PSEVAPASSSLLAKLVGEYMDLSSIRV-VEGAVAETSALLDQKWDKICYTGNSRVARIVM 212
PSE+AP + L + +L + + VEG ET A L D +C+TG+ R V
Sbjct: 161 PSEIAPRFVAPLLXALNTVPELRDVLIFVEGG-GETGANLINYVDFVCFTGSVATGREVA 219
Query: 213 AAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGC--NNGQACISPDHIITTK 270
AA+ P LELGGK P + NL++A ++ WG N GQ+C+S + I +
Sbjct: 220 ETAARRFIPAYLELGGKDPAIVLESANLELATSAIL---WGAVVNTGQSCLSIERIYVAE 276
Query: 271 DYAPKLVRLLI 281
+ LI
Sbjct: 277 SKFEEFYHQLI 287
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 5/244 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+++ + E++ V D KP + ++ ++ + + + + + +
Sbjct: 71 RATYLRAIAAKITEKKDHFVKLETIDSGKP-FDEAVLDIDDVASCFEYFAGQAEALDGKQ 129
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
KA ++ + ++ +P GVV +ISPWNYP L++ + A+AAG VLKPSE+A
Sbjct: 130 KAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASV 189
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAK 217
+ ++ E + + ++ G + A L DKI +TG+S VMA+AA+
Sbjct: 190 TCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQ 249
Query: 218 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ PV LELGGKSP+V +++ I G + NGQ C + ++ + A + V
Sbjct: 250 LVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCF-WTNGQICSATSRLLVHESIAAEFV 308
Query: 278 RLLI 281
L+
Sbjct: 309 DKLV 312
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 5/244 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L+++ + ER+P++ D KP E++ +++ + + + + +
Sbjct: 91 RAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAA-WDMDDVAGCFEYFADQAEALDKRQ 149
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
+ S+ + EP GVV +I+PWNYP L++ + A+AAG VLKPSE+A
Sbjct: 150 NSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASV 209
Query: 161 SSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK 217
+ LA + E S + +V G + A L DK+ +TG+ + +MA+AA
Sbjct: 210 TCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMASAAP 269
Query: 218 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ PV LELGGKSP+V +++ A + G + NGQ C + ++ A K
Sbjct: 270 MVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCF-WTNGQICSATSRLLIHTKIAKKFN 328
Query: 278 RLLI 281
++
Sbjct: 329 ERMV 332
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 5/273 (1%)
Query: 12 EVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE 71
E D A+ R A T S R L+++ + E++P++ D KP
Sbjct: 45 EDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKP- 103
Query: 72 LESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNY 131
L+ + +++ + + + +KA S+ + ++ EP GVV +I+PWNY
Sbjct: 104 LDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163
Query: 132 PFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSA 190
P L++ V A+AAG A +LKPSE+A + L ++ E + + ++ G E A
Sbjct: 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGA 223
Query: 191 LL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMI 248
L DK+ +TG+S +M AAA+ + PV LELGGKSP+V ++L A I
Sbjct: 224 PLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAI 283
Query: 249 MGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
G + NGQ C + +I + A + + ++
Sbjct: 284 FGCF-WTNGQICSATSRLILHESIATEFLNRIV 315
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV I WNYPF+++ A+A GNA+V KPS + P + +LA++ E + +
Sbjct: 154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVG 213
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ VV+G AET +LL + K+ +TG+ + VM +AK + V LELGGKSP++
Sbjct: 214 LVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLI 272
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILET 284
L+ A R +M + GQ C + + ++ P+ + ++ T
Sbjct: 273 FKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 5/244 (2%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R L+++ + E++ ++ D KP LE ++ ++ + + + + +
Sbjct: 74 RARYLRAIAAKIKEKKDELGKLESIDCGKP-LEEALADLDDVVACFEYYAGLAEELDSKQ 132
Query: 101 KAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160
KA S+ + I+ EP GVV +I+PWNYPFL++ + A+AAG A +LKPSE+A
Sbjct: 133 KAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASV 192
Query: 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAK 217
+ L ++ E + + +V G E A L DKI +TG+S +M AA+
Sbjct: 193 TCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMTTAAQ 252
Query: 218 HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ PV LELGGKSP+V ++L + G + NGQ C + +I + A + V
Sbjct: 253 LVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCF-FTNGQICSATSRLIVHESIAVEFV 311
Query: 278 RLLI 281
L+
Sbjct: 312 DKLV 315
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 111 SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
+ ++IV EP GVV I+PWNYP L + + A+A G +LV+KPSE+ P ++ + +L+
Sbjct: 162 TESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELME 221
Query: 171 EY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELG 227
E +I ++ GA +E ++ ++ D + +TG + +M AA ++T + LELG
Sbjct: 222 EVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELG 281
Query: 228 GKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
GK+P ++FD + ++A + + G + + GQ C + I+ K + LI
Sbjct: 282 GKNPNIIFDDA-DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALI 334
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 174 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ ++ G E L DKI +TG+ +M AAA+ + PV LELGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLELGGKSP 279
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
VVFD NL +A + G + N GQ C + +I ++ A + L+
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIF-ANTGQVCSATSRLIVQENIASAFMDRLL 329
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV +I+PWNYP L+++ V A+AAG A +LKPSE+A + L ++ E +
Sbjct: 160 VLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGL 219
Query: 174 DLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
++ ++ G E L DKI +TG+ +M AAA+ + PV L LGGKSP
Sbjct: 220 PSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMTAAAQLVKPVSLALGGKSP 279
Query: 232 -VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
VVFD NL +A + G + N GQ C + +I ++ A + L+
Sbjct: 280 IVVFDDIDNLDIAAEWTLFGIF-ANTGQVCSATSRLIVQENIASAFMDRLL 329
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMT 98
GWR+ K +L R D+V A DL +A K I A ++ W
Sbjct: 65 GWRMKTAKERAAILR-RWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIE-WFA 122
Query: 99 PEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
E + + T P+ +V EP GV I+PWN+P + V A+AAG +V+K
Sbjct: 123 EEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVK 182
Query: 154 PSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARI 210
P+E P S+ + LA+ G + S+ + + T + K+ +TG++ V R+
Sbjct: 183 PAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 211 VMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
+MA +A + + LELGG +P +VFD +L A I K+ NNGQ C+ +
Sbjct: 243 LMAQSAPTVKKLTLELGGNAPFIVFDDA-DLDAAVEGAIASKY-RNNGQTCVCTNRFF 298
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 21/283 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELES 74
DA+ A + + F + KT S R+ ++ ++++ +R D+ + ++ P +
Sbjct: 64 DADKA---INAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMA 120
Query: 75 SIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFL 134
+ A + I++ +K K + E ++ A + + GVV +I+PWN+P
Sbjct: 121 LNAQTATGSSHIRNFIKAYKEFSFQE----ALIEGNEQAILHYDAIGVVGLITPWNWPMN 176
Query: 135 LSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI-RVVEGAVAETSALLD 193
V+ A+ AG +VLKPSE+AP S+ L A+++ E S + ++ G A + L
Sbjct: 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLS 236
Query: 194 QKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGK-SPVVF-DSGIN-LKVACRRMI 248
D I +TG++R + + A+ L V LELGGK + ++F D+ I+ L+ R
Sbjct: 237 AHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHCF 296
Query: 249 MGKWGCNNGQACISPDHIITTK---DYAPKLVRLLILETSLNP 288
N+GQ+C +P ++ + D A K + + +T + P
Sbjct: 297 Y-----NSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 259
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 276
+L A +M + ++GQ C + + + +
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARF 301
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 276
+L A +M + ++GQ C + + + +
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARF 302
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 28/254 (11%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R + L ++ K + E++ ++ L D KP E+E SI L +K E +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVK----EHR 113
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
+ P + T EP G+V I+P+N+P LS + AIA GN +V P
Sbjct: 114 DEVIPSDDRLIFTR--------REPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHP 165
Query: 155 SEVAPASSSLLAKLVGEYMD-----LSSIRVVEGA--VAETSALLDQKWDKICYTGNSRV 207
S AP LAK++ + L ++ GA V ++++K + I +TG+S+V
Sbjct: 166 SSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKV 225
Query: 208 ARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
++ A + LELGG +P + +L A +I G + GQ CIS I+
Sbjct: 226 GELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMIL 282
Query: 268 TTKDYAPKLVRLLI 281
+ A K + + +
Sbjct: 283 VDESIADKFIEMFV 296
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + + + +KML ER+ L + +P + E HWM
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQP-----------------PTIIETMHWM--- 111
Query: 101 KAKTSITTFPSSAEIVP----------------EPFGVVLIISPWNYPFLLSLDPVVGAI 144
+ ++ F +A+ V EP GVV I WN P L+++ + A+
Sbjct: 112 GSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPAL 171
Query: 145 AAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-DQKWDKICYT 202
AG +VLKP+ P +++ LA++ E + + VV G + AL + D +T
Sbjct: 172 LAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFT 231
Query: 203 GNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
G+S V R V AA+ L P LELGGKS + ++L A M+ N GQ C++
Sbjct: 232 GSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVN 290
Query: 263 PDHIITTKDYAPKLV 277
I+ + ++V
Sbjct: 291 QTRILAPRSRYDEIV 305
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 110 PSSAEIVP--------EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161
P++ E +P +P G+V I+PWNYP + AI GN +V KPSE P +
Sbjct: 144 PAAGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLT 203
Query: 162 SSLLAKLVGEYMDLSSIRVVEGAVAET--SALLDQ-KWDKICYTGNSRVARIVMAAAAKH 218
+ LA+L+ + + + V+ G ET +AL++ K + TG+ + V+AAAAK
Sbjct: 204 ALKLARLIADILPEGVVNVITGR-GETVGNALINHPKVGXVSITGDIATGKKVLAAAAKT 262
Query: 219 LTPVLLELGGKSPVVFDSGINLKVACRRM-IMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ LELGGK+PV+ +L+ + G + N GQ C + I KLV
Sbjct: 263 VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYY--NAGQDCTAACRIYAEAGIYEKLV 320
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 39/305 (12%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALR------QDLD 68
D E VK R F G WR ++LN + D+++ R + ++
Sbjct: 56 DKEDVDKAVKAARQAFQIGSP----WRTMDASERGRLLN-KLADLIERDRLLLATMEAMN 110
Query: 69 KPELESSIYEVALLKTSIKSALKELKHWMTPEKAKT-----SITTFPSSAEIVPEPFGVV 123
+L S+ Y + L IK+ L+ W + +T + T+ S EP GV
Sbjct: 111 GGKLFSNAY-LMDLGGCIKT-LRYCAGWADKIQGRTIPMDGNFFTYTRS-----EPVGVC 163
Query: 124 LIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVE 182
I PWN+P L+ L + A++ GN +V+KP+E P ++ + L+ E + +V
Sbjct: 164 GQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVP 223
Query: 183 G----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSG 237
G A A S+ +D DK+ +TG++ V +++ AA K +L V LELGGKSP + +
Sbjct: 224 GYGPTAGAAISSHMDV--DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFAD 281
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRL-------LILETSLNPCI 290
+L A G + + GQ CI+ + + + VR +L L P +
Sbjct: 282 ADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340
Query: 291 YSPPK 295
P+
Sbjct: 341 SQGPQ 345
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-M 173
++ EP GVV II+PWN+PF+++ + V AI +G +VLKPSE +S LA+L E +
Sbjct: 157 VLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216
Query: 174 DLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSP 231
VV G +L D D + +TG+ RV + AA+ + V LELGGK P
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGP 276
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
+ + +L A + G + N GQ CIS ++ + L L+
Sbjct: 277 QIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALXERLL 325
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVXLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
+L++A + ++ + N+GQ C + + K + V L
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRL 305
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM---D 174
EP GV I PWN+P L+ + A+ GN +V+KP+E P S+ + L+ E
Sbjct: 156 EPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPG 215
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVV 233
+ +I G A + DKI +TG++ V +++ AA + +L V LELGGKSP +
Sbjct: 216 VVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNI 275
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIYSP 293
+ +L A + G + N GQ C + I + + V+ + E + + SP
Sbjct: 276 IFADADLDYAVEQAHQGVF-FNQGQCCTAGSRIFVEESIYEEFVKRSV-ERAKRRIVGSP 333
Query: 294 PKP 296
P
Sbjct: 334 FDP 336
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
+L++A + ++ + N+GQ C + + K + V L
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRL 305
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 49 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 104
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 105 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 160
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 161 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 220
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 221 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 280
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ C + +D + V
Sbjct: 281 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFV 313
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ C + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFV 319
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 140 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 199
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V + LGGKSP++
Sbjct: 200 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMALGGKSPLI 259
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 276
+L A +M + ++GQ C + + + +
Sbjct: 260 IFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARF 301
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 120 FGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MDLS 176
GV I PWN+PF L + A+ GN +V+KPSE P ++ AK+V E +
Sbjct: 143 LGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVF 202
Query: 177 SIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
++ + G + K + TG+ +MA AAK++T V LELGGK+P +
Sbjct: 203 NLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD 262
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
+L++A + ++ + N+GQ C + + K + V L
Sbjct: 263 DADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRL 305
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ C + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFV 319
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ C + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFV 319
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 27/252 (10%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
H TP K + ++ ++ +P GV +I+PWN+P + V A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 155 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 207
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 208 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ C+ +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTCVCSNQF 298
Query: 267 ITTKDYAPKLVR 278
+ + V+
Sbjct: 299 LVQRGIHDAFVK 310
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP-ELESSIYEVALLKTSIKSALKELKHWMTP 99
R + L ++K R+ DIV A+ +L P L ++ L + +A L ++
Sbjct: 69 RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFV-AARDALDNYEFE 127
Query: 100 EKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159
E+ + +V E GV +I+PWN+P + + A AAG+ +VLKPSE P
Sbjct: 128 ERRGDDL--------VVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETP 179
Query: 160 ASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA 216
++ +LA++ + + +V G A L + K +TG+ + AA
Sbjct: 180 FAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA 239
Query: 217 KHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHII 267
K V LELGGKSP + +++K A + GK N GQ C + ++
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAA-KATTGKVVNNTGQVCTAGTRVL 289
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 276
+L A +M + ++GQ + + + +
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVATNGTRVFIHRSQQARF 302
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V L+LGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ+C + +D + V
Sbjct: 287 VEQAHFALF-FNQGQSCSAGSRTFVQEDIYDEFV 319
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 5/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS 177
EP GVV I WNYP ++L A+AAGNA++ KPSEV P ++ LA++ E
Sbjct: 141 EPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDG 200
Query: 178 I-RVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVV 233
+ V+ G+ E L + +KI +TG + + VMA A++ L V +ELGGKSP++
Sbjct: 201 VFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLI 260
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKL 276
+L A +M + ++GQ + + + +
Sbjct: 261 IFPDADLDRAADIAVMANF-FSSGQVXTNGTRVFIHRSQQARF 302
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 156 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 212
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 213 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRL 294
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV + I WNYP ++ A+ AGNA+V KPSE P + +A+++ E +
Sbjct: 150 PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGL 209
Query: 178 IRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
V++G +T LL D K+ TG+ R V AAAA HL V +ELGGKSP++
Sbjct: 210 FNVIQGD-RDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVF 268
Query: 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
+++ A ++G + ++GQ C + + K
Sbjct: 269 DDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQK 302
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L++ ++ E + D+ + + KP L + E++ + I+ W E
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKP-LAEAKGEISYAASFIE--------WFAEE 121
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ T P ++ +P GV I+PWN+P + A+AAG +VLKP+
Sbjct: 122 GKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPA 181
Query: 156 EVAPASSSLLAKL-VGEYMDLSSIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVM 212
P S+ LA+L + + VV G+ L K+ +TG++ + R +M
Sbjct: 182 SQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM 241
Query: 213 AAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
AK + V LELGG +P +VFD +L A + K+ N GQ C+ + +
Sbjct: 242 EQCAKDIKKVSLELGGNAPFIVFDDA-DLDKAVEGALASKF-RNAGQTCVCANRL 294
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ + G++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ C + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCCCAGSRTFVQEDIYDEFV 319
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 20/266 (7%)
Query: 23 VKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DLDKPELESS 75
VK R F G WR ++LN ER+ + AL D KP + S
Sbjct: 62 VKAARAAFQLGSP----WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISY 117
Query: 76 IYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLL 135
+ ++ + + L+ W KT + EP GV I PWN+P L+
Sbjct: 118 LVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLM 173
Query: 136 SLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL-- 192
+ A+A GN +V+K +E P ++ +A L+ E + V+ G A +
Sbjct: 174 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIAS 233
Query: 193 DQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSPVVFDSGINLKVACRRMIMGK 251
+ DK+ +TG++ V ++ AA K +L V LE+GGKSP + S ++ A +
Sbjct: 234 HEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFAL 293
Query: 252 WGCNNGQACISPDHIITTKDYAPKLV 277
+ N GQ C + +D + V
Sbjct: 294 F-FNQGQCCCAGSRTFVQEDIYAEFV 318
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ CI+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP GV +I PWN P +L + A+ GN +++KP+E P ++ +A L+ E
Sbjct: 158 EPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPG 217
Query: 177 SIRVVEG----AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK-HLTPVLLELGGKSP 231
+ +V G A A S+ +D DK+ +TG++ V +++ AAAK +L V LELG K+P
Sbjct: 218 VVNIVPGYGPTAGAAISSHMDV--DKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNP 275
Query: 232 VVFDSGINLKVACRRMIMGKWGCNNGQACIS 262
+ + +L A G + N GQ+CI+
Sbjct: 276 CIVFADADLDSAVEFAHQGVF-TNQGQSCIA 305
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL--S 176
P G V II+PWN P +LS + A+A GN +VLKP+E +P +++ LA+++ E DL
Sbjct: 162 PAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKE-ADLPPG 220
Query: 177 SIRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+V+G E A L + TG + +IVM AA HL + ELGGKSP +
Sbjct: 221 VFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALV 280
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITT----KDYAPKLVRL---------LI 281
+ +L+ A ++ + NG+ C + ++ +D+ K+V L
Sbjct: 281 FADADLERALDAVVFQIFSF-NGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLD 339
Query: 282 LETSLNPCIY 291
ET + P I+
Sbjct: 340 PETEVGPLIH 349
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L+LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ CI+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY- 172
+ V P GV ++I PWN+ F + V I GN +VLKP+ AP ++ +++ E
Sbjct: 167 QYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESG 226
Query: 173 MDLSSIRVVEGAVAETS-ALLDQ-KWDKICYTGNSRVARIVMAAAAK------HLTPVLL 224
+ + V G+ AE L+D K I +TG+ V + AAK HL V+
Sbjct: 227 LPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIA 286
Query: 225 ELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLVRLLILE 283
E+GGK VV D ++++A + + +G GQ C + ++ K Y L R++ +
Sbjct: 287 EMGGKDTVVVDEDCDIELAAQSIFTSAFGF-AGQKCSAGSRAVVHEKVYDEVLKRVIEIT 345
Query: 284 TS 285
S
Sbjct: 346 ES 347
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFV 319
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P +++ L ++ E +
Sbjct: 148 PRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 178 IRVVEGAVAETSALLDQK--WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235
+ V+ G + L + I TG++ + + +A+++TPV+LELGGK+P+V
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVM 267
Query: 236 SGINLKVACRRMIMGKWGCNNGQAC 260
+L A + G++ N GQ C
Sbjct: 268 DDADLDKAAEDALWGRF-ANCGQVC 291
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFV 319
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 15 DAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLN------EREPDIVDALRQ-DL 67
D E VK R F G WR ++LN ER+ + AL D
Sbjct: 55 DKEDVDKAVKAARAAFQLGSP----WRRMDASHRGRLLNRLADLIERDRTYLAALETLDN 110
Query: 68 DKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIIS 127
KP + S + ++ + + L+ W KT + EP GV I
Sbjct: 111 GKPYVISYLVDLDM----VLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQII 166
Query: 128 PWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVA 186
PWN+P L+ + A+A GN +V+K +E P ++ +A L+ E + +V G
Sbjct: 167 PWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226
Query: 187 ETSALL--DQKWDKICYTGNSRVARIV-MAAAAKHLTPVLLELGGKSPVVFDSGINLKVA 243
A + + DK+ +TG++ + R++ +AA + +L V LELGGKSP + S ++ A
Sbjct: 227 TAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWA 286
Query: 244 CRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ + N GQ + +D + V
Sbjct: 287 VEQAHFALF-FNQGQCXCAGSRTFVQEDIYDEFV 319
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 27/252 (10%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP------ELESSIYEVALLKTSIKSALKELK 94
R S L+ ++ + + D+ + + KP E+ S + + + ++
Sbjct: 72 RSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDII 131
Query: 95 HWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKP 154
H TP K + ++ ++ +P GV +I+PWN+P + V A+AAG +V+KP
Sbjct: 132 H--TPAKDRRAL--------VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 155 SEVAPASSSLLAKLV-------GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRV 207
+E P S+ LA+L G Y + R V E + D KI +TG++
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGE-AICTDPLVSKISFTGSTTT 240
Query: 208 ARIVMAAAAKHLTPVLLELGGKSP-VVFDSGINLKVACRRMIMGKWGCNNGQACISPDHI 266
+I++ AA + V +ELGG +P +VFDS N+ A + K+ N GQ + +
Sbjct: 241 GKILLHHAANSVKRVSMELGGLAPFIVFDSA-NVDQAVAGAMASKFR-NTGQTAVCSNQF 298
Query: 267 ITTKDYAPKLVR 278
+ + V+
Sbjct: 299 LVQRGIHDAFVK 310
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ CI+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 95 HWMTPEKAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNA 149
W E + T P+ ++ +P GV I+PWN+P + A+AAG
Sbjct: 139 EWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCT 198
Query: 150 LVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGN 204
++++P+++ P ++ +LA+ G + +++V G E A L + K+ +TG+
Sbjct: 199 MIVRPADLTPLTALALGVLAEKAG--IPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256
Query: 205 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 264
+ V R++MA A + + LELGG +P + +L A ++ K+ N GQ C+ +
Sbjct: 257 TEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCAN 315
Query: 265 HIITTKDYAPKLVRLL 280
I + K L
Sbjct: 316 RIYVQRGVYDKFAEKL 331
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GV + ISPWN+ + + V I GN +VLKP+ P ++ +++ + +
Sbjct: 172 PMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGV 231
Query: 178 IRVVEGAVAETSA-LLDQ-KWDKICYTGNSRVA-RIVMAAAA-----KHLTPVLLELGGK 229
I V G+ AE L+D K I +TG+ V R+ AA HL V++E+GGK
Sbjct: 232 INYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGK 291
Query: 230 SPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD 271
VV D +L +A +++ +G +GQ C + + KD
Sbjct: 292 DTVVVDRDADLDLAAESILVSAFGF-SGQKCSAGSRAVIHKD 332
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ I+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V LELGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ I+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 115 IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMD 174
I +P GVV I+PWNYP +++ + A+AAGN +VLKPSE+ P ++ LA+L +
Sbjct: 155 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 214
Query: 175 LSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
+ ++ G L K + TG+ +++ A + +ELGGK+PV
Sbjct: 215 AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 274
Query: 233 -VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
VFD V G + N GQ C + I K LV L
Sbjct: 275 IVFDDADIEAVVEGVRTFGYY--NAGQDCTAACRIYAQKGIYDTLVEKL 321
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+L++ + +I G +G +GQ C + ++ + A +LV
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELV 301
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I ++G++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+L++ + +I G +G +GQ C + ++ + A +LV
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELV 301
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 20/247 (8%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R + L+ L+E DI+ + ++ ++S+I ++ + L MT
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI--------ELEQTIAILDEAMTYT 119
Query: 101 KAKTSITTFPSSAE-----IVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPS 155
+ PS E I P GV+ ISP+N+P LS+ + AIA GN++V KP
Sbjct: 120 GELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 156 -EVAPASSSLLAKLVGEYMDLSS--IRVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARI 210
+ A + +++AK E+ L + + V+ V E +L + I +TG++ V R
Sbjct: 180 IQTAISGGTIIAKAF-EHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRH 238
Query: 211 VMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
+ A + + LELGG +P S ++ A I GK+ + GQ C+ + II +
Sbjct: 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQ 297
Query: 271 DYAPKLV 277
D + V
Sbjct: 298 DVYDEFV 304
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKL-VGEYMDLS 176
EP GV I+ PWNYP ++ +AAGN +V+KP++V P ++ A+L + +
Sbjct: 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKG 236
Query: 177 SIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVV 233
+ ++ G+ + L D KI +TG++ V + +M + A ++ V L LGGKSP++
Sbjct: 237 VVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLI 296
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283
+ +L A +M M N G+ I+ + + + V+ ++ E
Sbjct: 297 IFADCDLNKAV-QMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEE 345
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 18/266 (6%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPE 100
R+ L+ L R ++ + ++ KP ES+ T + S + ++ +
Sbjct: 66 RIELLERFAATLKSRADELARVIGEETGKPLWESA--------TEVTSXVNKVAISVQAF 117
Query: 101 KAKTSITTFP---SSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEV 157
+ +T + P ++A + +P GVV + P+N+P L +V A+ AGN +V KPSE+
Sbjct: 118 RERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSEL 177
Query: 158 APASSSL-LAKLVGEYMDLSSIRVVEGAVAETSALLDQKW-DKICYTGNSRVARIVMAAA 215
P + L L + + + +V+G AL + D + +TG+SR ++ +
Sbjct: 178 TPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQF 237
Query: 216 AKHLTPVL-LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP 274
+L LE GG +P+V + +L A +I + + GQ C ++ +
Sbjct: 238 GGQPQKILALEXGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWG 296
Query: 275 K--LVRLLILETSLNPCIYS-PPKPF 297
L RL+ + +L + P PF
Sbjct: 297 DALLARLVAVSATLRVGRFDEQPAPF 322
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++L LGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLALGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+L++ + +I G +G +GQ C + ++ + A +LV
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRCTAVKRVLVMESVADELV 301
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLS 176
EP G+VL ISP+NYP L+ + A+ AGN + KP S LLA+ E +
Sbjct: 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAG 201
Query: 177 SIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234
+ G +E + Q + I +TG++ + + A + P++LELGGK +
Sbjct: 202 VFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIV 259
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+L++ + +I G +G +GQ + ++ + A +LV
Sbjct: 260 LEDADLELTAKNIIAGAFGY-SGQRSTAVKRVLVMESVADELV 301
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 17/253 (6%)
Query: 34 KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKEL 93
K + RV L + +L ER+ I + + ++ KP+ +S+I EV+ I+ E
Sbjct: 66 KIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-KSAIGEVSRTADIIRHTADEA 124
Query: 94 KHWMTPEKAKTSITTFPSSAEIV---PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNAL 150
+ E K SS +I EP GVVL ISP+NYP L+ + A+ GN +
Sbjct: 125 LR-LNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 151 VLKPSEVAPASSSLLAKLVGEYMDLSS----IRVV--EGAVAETSALLDQKWDKICYTGN 204
V KP+ S K+V D + I+VV G+V + D I +TG
Sbjct: 184 VFKPATQGSLSG---IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGG 240
Query: 205 SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPD 264
+ + A + PV+LELGGK P + +LK+ +++ G + +GQ C +
Sbjct: 241 TTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIK 297
Query: 265 HIITTKDYAPKLV 277
+ A +LV
Sbjct: 298 RVFVQDSVADQLV 310
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLVRLL 280
K+ ++ D + +A +++ +G GQ C + +I T+ Y P L R+L
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGF-QGQKCSAASRLILTQGAYEPVLERVL 343
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLVRLL 280
K ++ D + +A +++ +G GQ C + +I T+ Y P L R+L
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGF-QGQKCSAASRLILTQGAYEPVLERVL 343
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS--I 178
GVV +ISPWN+P LS+ V A+A GNA+V+KP+ P + ++ + E + + I
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 179 RVVEGAVAETS-ALLDQKWDK-ICYTGNSRVARIV--MAAAAKHLTPVLLELGGKSPVV 233
V GA +E + K I +TG++ V R V +A + V LELGG +P V
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFV 268
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P G ++I+PWN+P + +VG +A GN ++ KP+E A + + ++ E
Sbjct: 173 PLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 178 IRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTP-------VLLELGG 228
+ + G E A L + + I +TG+ V + AA + L P +E GG
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR-LAPGQTWFKRAYVETGG 291
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
K ++ D + +A +++ +G + + I+T Y P L R+L
Sbjct: 292 KDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVL 343
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P GV+L I PWN+P L V + AGN+ +LK + + +A+++ E + +
Sbjct: 126 PLGVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGV 185
Query: 179 RVVEGAVAE--TSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
A E + + D + + TG+ R + A A L +LELGG P + +
Sbjct: 186 YGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
+L++A + + G++ N GQ C + I + A +
Sbjct: 246 DADLELAVKAAVAGRYQ-NTGQVCAAAKRFIVEEGIAQAFTDRFV 289
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 108 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 168 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 223
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 224 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ELGG P + +L +A ++ G + GQ C + ++ + KLV
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLV 314
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 108 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 168 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 223
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 224 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ELGG P + +L +A ++ G + GQ C + ++ + KLV
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLV 314
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 108 TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167
T + + EP GVV I+P+NYP +++ + + GNA+V+KPS P +++ K
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 168 LV---GEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKHLTPVL 223
+ G D ++ + G AE + D + + +TG++ V R+V K +
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAE-KIVADDRVAAVSFTGSTEVGERVVKVGGVKQY---V 261
Query: 224 LELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLV 277
+ELGG P + +L +A ++ G + GQ C + ++ + KLV
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLV 314
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 13/239 (5%)
Query: 40 WRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL---KTSIKSALKELKHW 96
WR + S ++L+ DI +AL++ D+ ++ LL K ++ + ++
Sbjct: 42 WRHEEPASRAEILH----DIANALKEHEDELAKXXTLEXGKLLSESKEEVELCVSICNYY 97
Query: 97 MT--PEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
PE K T + + +A + + GV+ PWN+P + GN ++LK
Sbjct: 98 ADHGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLK 157
Query: 154 PSEVAPASSSLLAKLVGEYM--DLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIV 211
+ P S++L AK++ + S I + + D + + TG+ R V
Sbjct: 158 HAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAV 217
Query: 212 MAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK 270
AA K+L ELGG + + +V R ++ N+GQ C S II K
Sbjct: 218 AEAAGKNLKKSTXELGGNDAFIVLDDADPQV-LRNVLNDARTYNDGQVCTSSKRIIVEK 275
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 121 GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIR 179
GV + ISPWN+P + L V A+ AGN++V KP+E P + L+ E + S++
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 180 VVEGAVAETSALLDQKWD--KICYTGNSRVARIV---MAAAAKHLTPVLLELGGKSPVVF 234
+V G A L D + +TG++ VAR + +AA + P++ E GG + ++
Sbjct: 711 LVTGD-GRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIA 769
Query: 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
D+ + ++ + + GQ C + + +D A +++ ++
Sbjct: 770 DATALPEQVADDVVTSAFR-SAGQRCSALRLLFVQEDVADRMIEMV 814
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 99/239 (41%), Gaps = 14/239 (5%)
Query: 41 RVSQLKSLMKMLNEREPDIVDALRQDLDKP--ELESSIYEVALLKTSIKSALKELKHWMT 98
R L+ + L E +I L + KP E + + A + L
Sbjct: 73 RRKWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTI 132
Query: 99 PEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158
PEK K T + P GV +I PWN+P + A+AAG V+KP+
Sbjct: 133 PEKPKDCTWT------VHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASET 186
Query: 159 PASSSLLAKLVGEYMDL--SSIRVVEGAVAETSALLDQKWD--KICYTGNSRVARIVMAA 214
P + V + +DL + +V G + +L + D + +TG++ V R ++
Sbjct: 187 PLTXIAFFS-VXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVD 245
Query: 215 AAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYA 273
A+ + + LELGG +P + +L+ A +I K+ GQ C+ + I + A
Sbjct: 246 TAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVA 303
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G+V II+ +N+P + A+ GN + K + P +S + K+V E ++ +++
Sbjct: 155 PVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNL 214
Query: 179 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
GA T+ D++ D + +TG++ V ++V + LLELGG + +
Sbjct: 215 PGAICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAI 274
Query: 233 VF--DSGINLKV 242
+ D+ +NL V
Sbjct: 275 IVFEDADLNLVV 286
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MD 174
+ +P G+ I+P+N+P + AIA GNA +LKPSE P+ LA+L E +
Sbjct: 159 IRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLP 218
Query: 175 LSSIRVVEGAVAETSALLDQ-KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVV 233
+ VV G A+L + + G++ +AR V AA + G K+ +
Sbjct: 219 AGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQCFGGAKNHXI 278
Query: 234 FDSGINLKVACRRMIMGKWGCNNGQAC 260
+L A +I +G + G+ C
Sbjct: 279 IXPDADLDQAANALIGAGYG-SAGERC 304
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Query: 118 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY---MD 174
EP GV +I+PWN+P +S+ AI GN +V KPS + L +L E
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 175 LSSIRVVEGAVAETSALLDQKWDKICYTGNSRVA-RIVMAAAAKH-----LTPVLLELGG 228
+ + G+V + I +TG+ RI+ AA H + ++ E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 229 KSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLI 281
K+ ++ D +L A ++ +G GQ C + +I K + L+
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGF-QGQKCSACSRVIVLDAVYDKFIERLV 836
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSS 177
P GVV I+P+N+P ++ AIA GN +LKPSE P + L +L + +
Sbjct: 141 PIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGV 200
Query: 178 IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236
VV GA + +L+ K I + G+ V V +++L V G K+ + +
Sbjct: 201 FNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLN 260
Query: 237 GINLKVACRRMIMGKWGCNNGQACIS 262
NL+ ++ +G + G+ C++
Sbjct: 261 DANLEDTVTNIVGAAFG-SAGERCMA 285
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 QADS-LNSAILC 270
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 EADS-LNSAILC 270
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 35 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 92
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 93 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 149
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 150 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 206
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 207 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 257
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 258 EADS-LNSAILC 268
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIV------- 60
+ +E D A F +E G A+ + +Y R ++L ++K+L + D
Sbjct: 37 RVSSEGLDLARAFSFAREDGG--AALRALTYAQRAARLADIVKLLQAKRGDYYAIATANS 94
Query: 61 DALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPF 120
R D +++ I+ ++ + ++L E+ H + A++ SA+ V P
Sbjct: 95 GTTRND-SAVDIDGGIFTLSYY-AKLGASLGEV-HALRDGSAESLSKDRSFSAQHVLSPT 151
Query: 121 -GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL---- 175
GV L I+ +N+P + A+ +G +++KP A A++ L ++V + +D
Sbjct: 152 RGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKP---ATATAWLTQRMVADVVDAGILP 208
Query: 176 -SSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
++ ++ G+ ++ LLDQ +D + +TG++ A + A P ++ G + V
Sbjct: 209 PGALSIICGS---SAGLLDQIRSFDVVSFTGSADTAATLRA------HPAFVQRGARLNV 259
Query: 233 VFDSGINLKVAC 244
DS +N + C
Sbjct: 260 EADS-LNSAILC 270
>pdb|2H5G|A Chain A, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
pdb|2H5G|B Chain B, Crystal Structure Of Human Pyrroline-5-carboxylate
Synthetase
Length = 463
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 114 EIVPEPFGVVLII---SPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170
E V P GV+L+I P P + +L AIA+GN L+LK + A S+ +L L
Sbjct: 135 EQVTVPIGVLLVIFESRPDCLPQVAAL-----AIASGNGLLLKGGKEAAHSNRILHLLTQ 189
Query: 171 EYMDLSSIRVVEGAV-----AETSALLDQKWDKICYTGNSRVARIVMAAA 215
E + + ++ V E LD+ D I G+S++ R + AA
Sbjct: 190 EALSIHGVKEAVQLVNTREEVEDLCRLDKXIDLIIPRGSSQLVRDIQKAA 239
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 72/168 (42%), Gaps = 7/168 (4%)
Query: 119 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSI 178
P G+V II+ +N+P + A+ GN + K + S + K++ + ++ + +
Sbjct: 157 PVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 179 ------RVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPV 232
GA T+ D++ + + +TG+++V + V + LLELGG + +
Sbjct: 217 PGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAI 276
Query: 233 VFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLL 280
+ +L + + G GQ C + + + ++V L
Sbjct: 277 IAFEDADLSLVVPSALFAAVG-TAGQRCTTARRLFIHESIHDEVVNRL 323
>pdb|4GHK|A Chain A, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|B Chain B, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|C Chain C, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
pdb|4GHK|D Chain D, X-Ray Crystal Structure Of Gamma-Glutamyl Phosphate
Reductase From Burkholderia Thailandensis
Length = 444
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 49 MKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITT 108
+K N R D+ A + LD ++ LKT ++ L+++ P +++
Sbjct: 68 LKAANAR--DVARAKDKGLDAAFVDRLTLSDKALKTMVEG-LRQVATLPDPIGEMSNLKY 124
Query: 109 FPSSAEI--VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166
PS ++ + P GV+ II + +++D + +GNA +L+ A S++ LA
Sbjct: 125 RPSGIQVGQMRVPLGVIGII--YESRPNVTIDAAALCLKSGNATILRGGSEALESNTALA 182
Query: 167 KLVGE 171
KL+GE
Sbjct: 183 KLIGE 187
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 81/212 (38%), Gaps = 44/212 (20%)
Query: 116 VPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDL 175
+ EP G++ I P P ++ + ++ N ++ P A S++ AKLV +D
Sbjct: 100 IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV---LDA 156
Query: 176 SSIRVVEGAVAETSALLDQ----------KWDKICY---TGNSRVARIVMAAAAKHLTPV 222
+ V GA + +DQ K D I TG + AA P
Sbjct: 157 A---VAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK----AAYSSGKPA 209
Query: 223 LLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIIT-------------- 268
+ G PVV D ++K A ++ K +NG C S +I
Sbjct: 210 IGVGAGNVPVVIDETADIKRAVASVLXSKT-FDNGVVCASEQAVIVVDEVYDEVKERFAS 268
Query: 269 ------TKDYAPKLVRLLILETSLNPCIYSPP 294
+K A K+ ++L+++ +LN I P
Sbjct: 269 HKAHVLSKTDADKVRKVLLIDGALNAKIVGQP 300
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 183 GAVAETSALL---DQKWDKICYTGN-SRVARIVMAAAAKHLTPVLLELGGKSPVV-FDSG 237
G + TS L D D+I Y G+ + ARI++ H GG + F+
Sbjct: 364 GGIGHTSGLYTNQDVNADRIRYFGDKXKTARILINIPTTH--------GGIGDLYNFNVA 415
Query: 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPK 275
+L + C G WG N+ + P H+I K A +
Sbjct: 416 PSLTLGC-----GSWGGNSISENVGPKHLINKKTVAKR 448
>pdb|1V04|A Chain A, Serum Paraoxonase By Directed Evolution
pdb|3SRE|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5
pdb|3SRG|A Chain A, Serum Paraoxonase-1 By Directed Evolution At Ph 6.5 In
Complex With 2- Hydroxyquinoline
Length = 355
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 114 EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYM 173
EI+P G+ I S YP ++S DP +G L++ +E PA S L +++G +
Sbjct: 56 EILPN--GLAFISSGLKYPGIMSFDP----DKSGKILLMDLNEKEPAVSEL--EIIGNTL 107
Query: 174 DLSSIR 179
D+SS
Sbjct: 108 DISSFN 113
>pdb|1V75|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise (Geochelone Gigantea) At 2.0 A Resolution
pdb|1WMU|B Chain B, Crystal Structure Of Hemoglobin D From The Aldabra Giant
Tortoise, Geochelone Gigantea, At 1.65 A Resolution
pdb|2Z6N|B Chain B, Crystal Structure Of Carbonmonoxy Hemoglobin D From The
Aldabra Giant Tortoise, Geochelone Gigantea
Length = 146
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 95 HWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLK 153
HW + EK TS+ + E+ E +LI+ PW F S G +++ NA +L
Sbjct: 2 HWTSEEKQYITSLWAKVNVGEVGGEALARLLIVYPWTQRFFASF----GNLSSANA-ILH 56
Query: 154 PSEVAPASSSLLAKLVGEYMDLSSIR 179
++V +L +L +I+
Sbjct: 57 NAKVLAHGQKVLTSFGEAVKNLDNIK 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,413,175
Number of Sequences: 62578
Number of extensions: 321748
Number of successful extensions: 1048
Number of sequences better than 100.0: 94
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 874
Number of HSP's gapped (non-prelim): 96
length of query: 300
length of database: 14,973,337
effective HSP length: 98
effective length of query: 202
effective length of database: 8,840,693
effective search space: 1785819986
effective search space used: 1785819986
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)