Query 022269
Match_columns 300
No_of_seqs 126 out of 1166
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:41:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022269hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.9E-63 6.4E-68 463.6 30.8 283 4-291 31-317 (490)
2 4f3x_A Putative aldehyde dehyd 100.0 7.6E-62 2.6E-66 454.4 32.0 284 4-291 49-334 (498)
3 3ros_A NAD-dependent aldehyde 100.0 1.3E-61 4.4E-66 451.4 33.4 281 4-291 13-296 (484)
4 3ifg_A Succinate-semialdehyde 100.0 8.6E-62 3E-66 452.9 31.5 283 4-291 37-322 (484)
5 3iwj_A Putative aminoaldehyde 100.0 1.4E-61 4.7E-66 453.8 32.8 286 4-291 32-325 (503)
6 3lns_A Benzaldehyde dehydrogen 100.0 2.1E-61 7.2E-66 448.2 33.4 285 3-288 14-298 (457)
7 3rh9_A Succinate-semialdehyde 100.0 1.6E-61 5.3E-66 452.7 32.2 282 4-291 36-321 (506)
8 3ek1_A Aldehyde dehydrogenase; 100.0 1.2E-61 4.2E-66 453.2 30.2 283 4-291 57-342 (504)
9 2o2p_A Formyltetrahydrofolate 100.0 1.5E-61 5.2E-66 453.9 30.5 287 4-291 61-353 (517)
10 1a4s_A ALDH, betaine aldehyde 100.0 4.1E-61 1.4E-65 450.3 33.0 282 4-291 45-328 (503)
11 3ed6_A Betaine aldehyde dehydr 100.0 3.2E-61 1.1E-65 451.9 32.3 283 4-291 57-344 (520)
12 1wnd_A Putative betaine aldehy 100.0 3.5E-61 1.2E-65 449.6 31.7 284 4-291 47-332 (495)
13 3qan_A 1-pyrroline-5-carboxyla 100.0 8.3E-61 2.8E-65 450.9 34.4 282 5-291 62-352 (538)
14 1bxs_A Aldehyde dehydrogenase; 100.0 4.2E-61 1.4E-65 449.7 31.6 283 4-291 45-334 (501)
15 3k2w_A Betaine-aldehyde dehydr 100.0 3.2E-61 1.1E-65 450.7 30.6 283 4-291 37-322 (497)
16 1uzb_A 1-pyrroline-5-carboxyla 100.0 5E-61 1.7E-65 451.3 32.0 285 4-292 61-354 (516)
17 3i44_A Aldehyde dehydrogenase; 100.0 6.2E-61 2.1E-65 448.1 32.2 281 4-291 50-334 (497)
18 1o04_A Aldehyde dehydrogenase, 100.0 2.8E-61 9.7E-66 450.7 28.8 283 4-291 44-333 (500)
19 4e4g_A Methylmalonate-semialde 100.0 5.6E-61 1.9E-65 450.5 30.7 283 4-291 51-336 (521)
20 3u4j_A NAD-dependent aldehyde 100.0 1E-60 3.5E-65 449.3 31.3 282 5-291 49-335 (528)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 6.9E-61 2.3E-65 450.0 29.9 283 4-291 51-336 (515)
22 3b4w_A Aldehyde dehydrogenase; 100.0 6.3E-61 2.2E-65 448.2 29.4 283 4-291 33-319 (495)
23 2imp_A Lactaldehyde dehydrogen 100.0 9.8E-61 3.3E-65 446.2 30.5 284 4-292 31-317 (479)
24 3prl_A NADP-dependent glyceral 100.0 1.4E-60 5E-65 446.4 31.6 285 4-292 36-325 (505)
25 3etf_A Putative succinate-semi 100.0 1.9E-60 6.5E-65 442.9 31.6 282 4-291 16-299 (462)
26 2w8n_A Succinate-semialdehyde 100.0 1.4E-60 4.8E-65 445.4 29.0 283 4-291 35-324 (487)
27 3r31_A BADH, betaine aldehyde 100.0 1.1E-60 3.9E-65 447.9 28.4 279 4-291 39-323 (517)
28 3pqa_A Lactaldehyde dehydrogen 100.0 3.3E-60 1.1E-64 442.1 30.9 279 4-291 21-306 (486)
29 3jz4_A Succinate-semialdehyde 100.0 3E-60 1E-64 443.1 30.5 283 4-291 34-319 (481)
30 3sza_A Aldehyde dehydrogenase, 100.0 4.3E-60 1.5E-64 439.8 31.3 277 11-288 12-288 (469)
31 2j6l_A Aldehyde dehydrogenase 100.0 1.1E-59 3.7E-64 440.7 33.0 283 4-291 46-334 (500)
32 3ju8_A Succinylglutamic semial 100.0 1.7E-59 5.7E-64 438.7 32.7 282 4-291 29-314 (490)
33 2ve5_A BADH, betaine aldehyde 100.0 9.3E-60 3.2E-64 441.0 31.0 283 4-291 31-317 (490)
34 1euh_A NADP dependent non phos 100.0 9.8E-60 3.3E-64 439.0 30.0 281 4-291 27-315 (475)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.1E-59 3.6E-64 440.5 29.6 283 4-291 41-328 (501)
36 3ty7_A Putative aldehyde dehyd 100.0 8.1E-60 2.8E-64 440.1 27.7 279 4-291 32-313 (478)
37 3r64_A NAD dependent benzaldeh 100.0 1.9E-59 6.4E-64 439.8 30.0 283 4-291 37-325 (508)
38 4dng_A Uncharacterized aldehyd 100.0 1.6E-59 5.4E-64 438.9 29.2 284 4-291 31-318 (485)
39 1t90_A MMSDH, probable methylm 100.0 1.7E-59 5.8E-64 438.2 29.4 282 4-291 30-314 (486)
40 4h7n_A Aldehyde dehydrogenase; 100.0 5.5E-59 1.9E-63 433.8 29.0 282 4-291 15-297 (474)
41 4e3x_A Delta-1-pyrroline-5-car 100.0 5.2E-59 1.8E-63 439.6 28.5 289 5-298 88-388 (563)
42 1ez0_A ALDH, aldehyde dehydrog 100.0 3E-58 1E-62 432.2 30.2 285 4-290 16-320 (510)
43 3v4c_A Aldehyde dehydrogenase 100.0 1.7E-57 5.7E-62 428.8 32.0 285 4-290 49-354 (528)
44 4f9i_A Proline dehydrogenase/d 100.0 1.2E-57 4.1E-62 452.4 30.7 283 4-291 555-846 (1026)
45 3haz_A Proline dehydrogenase; 100.0 5.8E-56 2E-60 439.5 33.0 277 11-291 544-825 (1001)
46 2y53_A Aldehyde dehydrogenase 100.0 1.3E-55 4.3E-60 416.5 25.6 282 4-291 31-330 (534)
47 3my7_A Alcohol dehydrogenase/a 100.0 7.8E-53 2.7E-57 390.2 28.3 261 11-283 1-269 (452)
48 2h5g_A Delta 1-pyrroline-5-car 100.0 1.2E-53 4.3E-58 395.6 18.2 275 3-285 15-306 (463)
49 3k9d_A LMO1179 protein, aldehy 100.0 3.2E-52 1.1E-56 387.3 24.9 266 8-285 3-276 (464)
50 4ghk_A Gamma-glutamyl phosphat 100.0 3.6E-52 1.2E-56 384.7 24.6 265 16-289 25-308 (444)
51 1vlu_A Gamma-glutamyl phosphat 100.0 1.2E-52 4.3E-57 389.4 21.0 264 17-289 14-298 (468)
52 1o20_A Gamma-glutamyl phosphat 100.0 2.9E-51 9.8E-56 376.9 22.4 267 14-289 11-296 (427)
53 4gic_A HDH, histidinol dehydro 92.3 5.9 0.0002 35.3 22.1 243 32-289 26-300 (423)
54 1kae_A HDH, histidinol dehydro 72.3 54 0.0018 29.3 19.6 237 39-289 30-294 (434)
55 3v4g_A Arginine repressor; vib 63.2 24 0.00083 27.5 6.9 37 145-184 115-152 (180)
56 3v42_A Folliculin; tumor suppr 60.0 16 0.00056 29.7 5.6 45 137-183 21-65 (226)
57 3lap_A Arginine repressor; arg 44.1 88 0.003 24.0 7.3 34 40-74 17-54 (170)
58 1use_A VAsp, vasodilator-stimu 38.9 22 0.00075 20.8 2.3 28 41-68 13-40 (45)
59 2ioj_A Hypothetical protein AF 34.2 28 0.00097 25.5 3.0 46 176-221 53-100 (139)
60 1b93_A Protein (methylglyoxal 33.8 76 0.0026 23.9 5.3 112 121-257 12-135 (152)
61 3fgh_A Transcription factor A, 30.7 79 0.0027 19.6 4.4 36 24-59 28-63 (67)
62 1vmd_A MGS, methylglyoxal synt 29.8 1.1E+02 0.0039 23.6 5.8 113 120-257 27-151 (178)
63 1xxa_A ARGR, arginine represso 27.4 89 0.003 20.5 4.2 36 146-184 14-50 (78)
64 2ikd_A Prophenoloxidase activa 25.5 68 0.0023 20.2 3.2 44 256-299 9-64 (66)
65 2eqz_A High mobility group pro 23.5 1.1E+02 0.0039 20.0 4.3 36 24-59 47-82 (86)
66 2yvq_A Carbamoyl-phosphate syn 23.5 1.1E+02 0.0036 22.6 4.5 61 166-226 60-132 (143)
67 1v63_A Nucleolar transcription 22.6 1.5E+02 0.0051 20.3 4.9 39 25-63 37-75 (101)
68 2zfz_A Arginine repressor; DNA 21.7 1.7E+02 0.0059 19.0 5.1 34 146-183 20-54 (79)
69 3l2b_A Probable manganase-depe 20.5 2.8E+02 0.0096 21.8 7.0 44 173-217 118-162 (245)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.9e-63 Score=463.65 Aligned_cols=283 Identities=23% Similarity=0.283 Sum_probs=265.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.|+++|++||+.|+.+|+.+|.++|+++++.|++++++|+++++.|+|||..+++..|+..++
T Consensus 31 tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~ 110 (490)
T 2wme_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999765799999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+.+.+.... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 111 ~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~ 186 (490)
T 2wme_A 111 DVLEYYAGLVPAIEGEQIP----LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEEEE----EETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHhccccccCcccc----ccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHH
Confidence 9999999888776543321 124567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHH-HHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMA-AAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~-~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
.+++++.++ +|+|++|+++| +.+.++.|+.|+ ++.|.||||+.+|+.+.+ .+.+++||+++|+|||||+||++|||
T Consensus 187 ~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAd 266 (490)
T 2wme_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCcc
Confidence 999999999 99999999999 578999999997 999999999999998876 55667899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|++++|+|||++++|+|+++|+++++++++|+
T Consensus 267 l~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGd 317 (490)
T 2wme_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999 99999999999999999999999999999999999976
No 2
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=7.6e-62 Score=454.39 Aligned_cols=284 Identities=22% Similarity=0.289 Sum_probs=267.6
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++...|+..++
T Consensus 49 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~ 128 (498)
T 4f3x_A 49 TGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAII 128 (498)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999446999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+.+.+..... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 129 ~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~ 205 (498)
T 4f3x_A 129 DCWRFFAGAVRNLHAPAAGE---YLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTAL 205 (498)
T ss_dssp HHHHHHHHHTTCCEEECBEE---EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccccC---CcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHH
Confidence 99999999887765432211 124567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+++++.+++|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 206 ~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~ 285 (498)
T 4f3x_A 206 KLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLE 285 (498)
T ss_dssp HHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHH
Confidence 99999999999999999999 567899999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 286 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (498)
T 4f3x_A 286 AVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNL 334 (498)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999 99999999999999999999999999999999999876
No 3
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.3e-61 Score=451.40 Aligned_cols=281 Identities=19% Similarity=0.233 Sum_probs=267.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++..+.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 13 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 91 (484)
T 3ros_A 13 TNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCV 91 (484)
T ss_dssp TTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+...... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 92 ~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 167 (484)
T 3ros_A 92 SICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167 (484)
T ss_dssp HHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999999998876543322 4567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCCh-hhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~-~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++|+. +.+. |+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 168 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl 246 (484)
T 3ros_A 168 LTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADP 246 (484)
T ss_dssp HHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCH
Confidence 999999999 9999999999964 4566 99996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 247 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 296 (484)
T 3ros_A 247 QVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGD 296 (484)
T ss_dssp HHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=8.6e-62 Score=452.88 Aligned_cols=283 Identities=24% Similarity=0.320 Sum_probs=266.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 115 (484)
T 3ifg_A 37 TGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAA 115 (484)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...++..+.... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 116 ~~l~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 192 (484)
T 3ifg_A 116 SFIEWFAEEGKRVAGDTLP---TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192 (484)
T ss_dssp HHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHhhcCcccc---ccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999998877765433221 1123567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++| +.+.++.|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 193 ~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl 272 (484)
T 3ifg_A 193 AMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADL 272 (484)
T ss_dssp HHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCH
Confidence 999999999 99999999998 467899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 322 (484)
T 3ifg_A 273 DAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGR 322 (484)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 5
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.4e-61 Score=453.81 Aligned_cols=286 Identities=26% Similarity=0.367 Sum_probs=268.4
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh-----hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA-----SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYE 78 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~-----~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~e 78 (300)
++|++++++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++. |
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-e 110 (503)
T 3iwj_A 32 TQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-D 110 (503)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-H
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-H
Confidence 5689999999999999999999999999 999999999999999999999999999999999999999999965 9
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCC
Q 022269 79 VALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (300)
Q Consensus 79 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~ 158 (300)
+..+++.++|++...+.+.+...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 111 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~t 190 (503)
T 3iwj_A 111 IDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcc
Confidence 99999999999999888765442222211235678999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEc
Q 022269 159 PASSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (300)
Q Consensus 159 ~~~~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~ 235 (300)
|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 191 p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~ 270 (503)
T 3iwj_A 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVF 270 (503)
T ss_dssp CHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEc
Confidence 99999999999999 99999999999 457889999996 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+|||++.|++.+++++| .|+||.|+++++||||++++|+|+++|+++++++++|+
T Consensus 271 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 271 EDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp SSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999 99999999999999999999999999999999999876
No 6
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=2.1e-61 Score=448.17 Aligned_cols=285 Identities=32% Similarity=0.549 Sum_probs=261.4
Q ss_pred CcccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 3 ~~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
.+.|++++++..+.+|++.++++|++||+.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..+++..|+..+
T Consensus 14 ~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~ 93 (457)
T 3lns_A 14 HIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAV 93 (457)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHH
T ss_pred CCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999975699999
Q ss_pred HHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH
Q 022269 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (300)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~ 162 (300)
++.++++++..+++.++..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 94 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~ 173 (457)
T 3lns_A 94 LHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETS 173 (457)
T ss_dssp HHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHH
T ss_pred HHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHH
Confidence 99999999999988765443333223456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCcEEEEeCChhhHHHHHhCCCCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHH
Q 022269 163 SLLAKLVGEYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (300)
Q Consensus 163 ~~l~~~l~~a~p~~~i~~~~~~~~~~~~l~~~~v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~ 242 (300)
..+.+++.+++|+|++|+++|+.+.+..|+.+++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.
T Consensus 174 ~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~ 253 (457)
T 3lns_A 174 AVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQ 253 (457)
T ss_dssp HHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHH
Confidence 99999999999999999999988888999986699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCC
Q 022269 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNP 288 (300)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~ 288 (300)
|++.+++++| .|+||.|++++++|||++++++|+++|++++++++
T Consensus 254 Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 298 (457)
T 3lns_A 254 TVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL 298 (457)
T ss_dssp HHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 9999999999 99999999999999999999999999999999886
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.6e-61 Score=452.72 Aligned_cols=282 Identities=21% Similarity=0.272 Sum_probs=267.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 36 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 114 (506)
T 3rh9_A 36 TGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAA 114 (506)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEe-ecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVP-EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~ 162 (300)
+.++|++...+++.+.... . ..+...++.+ +|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 115 ~~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 190 (506)
T 3rh9_A 115 GFFDYCAKHISALDSHTIP-E---KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTM 190 (506)
T ss_dssp HHHHHHHHHGGGGCCEECS-C---CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCcccc-c---CCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHH
Confidence 9999999999888654321 1 1356678889 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 163 ~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
..+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 191 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dAD 270 (506)
T 3rh9_A 191 IAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDAD 270 (506)
T ss_dssp HHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCC
Confidence 9999999999 99999999999 567889999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|++++++|||++++|+|+++|+++++++++|+
T Consensus 271 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 321 (506)
T 3rh9_A 271 LEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGD 321 (506)
T ss_dssp HHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999 99999999999999999999999999999999999876
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.2e-61 Score=453.20 Aligned_cols=283 Identities=20% Similarity=0.316 Sum_probs=266.2
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~ 135 (504)
T 3ek1_A 57 DGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAA 135 (504)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+...+.... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 136 ~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~ 212 (504)
T 3ek1_A 136 SFIEWFAEEAKRVYGDTIP---APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212 (504)
T ss_dssp HHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc---cccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 9999998877765433221 1123567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++| +.+.++.|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 213 ~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl 292 (504)
T 3ek1_A 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADL 292 (504)
T ss_dssp HHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCH
Confidence 999999999 99999999998 467899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 293 ~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 342 (504)
T 3ek1_A 293 DAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGN 342 (504)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCC
Confidence 999999999999 99999999999999999999999999999999999876
No 9
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.5e-61 Score=453.87 Aligned_cols=287 Identities=19% Similarity=0.256 Sum_probs=266.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~ 81 (300)
++|++++++.++.+|++.++++|++||+ .|+.+|..+|.++|++++++|+++.++|+++++.|+|||..+++..|+..
T Consensus 61 tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 140 (517)
T 2o2p_A 61 DGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGM 140 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999996459999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHH
Q 022269 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (300)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~ 161 (300)
+++.++|++...+++.+...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 141 ~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~t 220 (517)
T 2o2p_A 141 SIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT 220 (517)
T ss_dssp HHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHH
Confidence 99999999998887765432111000122357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-ccCCceEEeCCCCCcEEEcCC
Q 022269 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDSG 237 (300)
Q Consensus 162 ~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~-~~~~~~~~e~gg~~~~iv~~d 237 (300)
+..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|
T Consensus 221 a~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~d 300 (517)
T 2o2p_A 221 ALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFAD 300 (517)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCC
Confidence 99999999999 99999999999 567889999996 999999999999999999999 899999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
||++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 301 ADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGd 353 (517)
T 2o2p_A 301 CDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGN 353 (517)
T ss_dssp SCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred CCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999 99999999999999999999999999999999999976
No 10
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.1e-61 Score=450.28 Aligned_cols=282 Identities=23% Similarity=0.309 Sum_probs=266.0
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 45 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 123 (503)
T 1a4s_A 45 TGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAW 123 (503)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 4999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+... ... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 124 ~~~~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 199 (503)
T 1a4s_A 124 QCIEYYAGLAPTLSGQHI-QLP---GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199 (503)
T ss_dssp HHHHHHHHHGGGCCEEEE-ECG---GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCCcc-cCC---CCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 999999998888765322 111 2446789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 200 ~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~ 279 (503)
T 1a4s_A 200 ILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELE 279 (503)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHH
Confidence 999999999 99999999998338889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 280 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 328 (503)
T 1a4s_A 280 NAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGD 328 (503)
T ss_dssp HHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999 99999999999999999999999999999999999875
No 11
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.2e-61 Score=451.95 Aligned_cols=283 Identities=22% Similarity=0.301 Sum_probs=267.5
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~--~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~ 81 (300)
++|++++++..+.+|++.++++|++|| +.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++. |+..
T Consensus 57 tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~ 135 (520)
T 3ed6_A 57 NQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDD 135 (520)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHH
Confidence 578999999999999999999999999 8999999999999999999999999999999999999999999975 9999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHH
Q 022269 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (300)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~ 161 (300)
+++.++|++...+.+.+... .. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 136 ~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t 212 (520)
T 3ed6_A 136 IHNVFMYFAGLADKDGGEMI-DS--PIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLT 212 (520)
T ss_dssp HHHHHHHHHHHTTSCCEEEE-CC--SSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcCeec-cc--CCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHH
Confidence 99999999998877654332 11 1135678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCC
Q 022269 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (300)
Q Consensus 162 ~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~da 238 (300)
+..+++++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+||+||+||++||
T Consensus 213 ~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dA 292 (520)
T 3ed6_A 213 TIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDA 292 (520)
T ss_dssp HHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCC
Confidence 99999999999 99999999999 578999999997 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 293 Dl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~ 344 (520)
T 3ed6_A 293 DFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGN 344 (520)
T ss_dssp CHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCC
T ss_pred CHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999 99999999999999999999999999999999999876
No 12
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3.5e-61 Score=449.60 Aligned_cols=284 Identities=21% Similarity=0.265 Sum_probs=266.8
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++..|+..++
T Consensus 47 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~ 126 (495)
T 1wnd_A 47 TGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIV 126 (495)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999644999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+... +.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 127 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~ 203 (495)
T 1wnd_A 127 DVFRFFAGAARCLNGLAA-GEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 203 (495)
T ss_dssp HHHHHHHHHTTCCEEECB-EEE--ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cCC--CCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHH
Confidence 999999998887754322 111 12446789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEYMDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 204 ~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~ 283 (495)
T 1wnd_A 204 KLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIE 283 (495)
T ss_dssp HHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHH
T ss_pred HHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHH
Confidence 99999999999999999999 677899999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 284 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 332 (495)
T 1wnd_A 284 AVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGA 332 (495)
T ss_dssp HHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCC
T ss_pred HHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCC
Confidence 99999999999 99999999999999999999999999999999999875
No 13
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=8.3e-61 Score=450.87 Aligned_cols=282 Identities=19% Similarity=0.285 Sum_probs=266.3
Q ss_pred ccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHHH
Q 022269 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKT 84 (300)
Q Consensus 5 ~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~ 84 (300)
+|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++. |+..+++
T Consensus 62 ~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~ 140 (538)
T 3qan_A 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAID 140 (538)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHH
T ss_pred CcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999976 9999999
Q ss_pred HHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHH
Q 022269 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (300)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~ 164 (300)
.++|++..+..+........ ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 141 ~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~ 217 (538)
T 3qan_A 141 FLEYYARQMIELNRGKEILS---RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAK 217 (538)
T ss_dssp HHHHHHHHHHHHHTCBCCCC---CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHH
T ss_pred HHHHHHHHHHHhcCCeeecc---cCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHH
Confidence 99999988555544333221 135678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc------CCceEEeCCCCCcEEEc
Q 022269 165 LAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH------LTPVLLELGGKSPVVFD 235 (300)
Q Consensus 165 l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~------~~~~~~e~gg~~~~iv~ 235 (300)
+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++ ++|+++|+|||||+||+
T Consensus 218 l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~ 297 (538)
T 3qan_A 218 FVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVD 297 (538)
T ss_dssp HHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEEC
Confidence 99999999 99999999999 667899999996 99999999999999999999988 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+|||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 298 ~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 352 (538)
T 3qan_A 298 RDADLDLAAESILVSAF-GFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGD 352 (538)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSC
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999 99999999999999999999999999999999999876
No 14
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=4.2e-61 Score=449.66 Aligned_cols=283 Identities=23% Similarity=0.281 Sum_probs=267.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~---~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~ 80 (300)
++|++++++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|++++++|+++++.|+|||..++...|+.
T Consensus 45 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~ 124 (501)
T 1bxs_A 45 TEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLG 124 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987656999
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChH
Q 022269 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (300)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~ 160 (300)
.+++.++|++...+++.++.... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 125 ~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 200 (501)
T 1bxs_A 125 GCIKTLRYCAGWADKIQGRTIPM----DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200 (501)
T ss_dssp HHHHHHHHHHHHGGGCCEEEECC----SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHhhCCeeec----cCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHH
Confidence 99999999999998886643211 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-ccCCceEEeCCCCCcEEEcC
Q 022269 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (300)
Q Consensus 161 ~~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~-~~~~~~~~e~gg~~~~iv~~ 236 (300)
++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++
T Consensus 201 t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~ 280 (501)
T 1bxs_A 201 TALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFA 280 (501)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECC
Confidence 999999999999 99999999999 677899999997 999999999999999999999 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 281 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 281 DADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp TSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999 99999999999999999999999999999999999875
No 15
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=3.2e-61 Score=450.72 Aligned_cols=283 Identities=19% Similarity=0.243 Sum_probs=268.3
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 37 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~ 115 (497)
T 3k2w_A 37 TGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTA 115 (497)
T ss_dssp SCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+++.+..... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 116 ~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (497)
T 3k2w_A 116 TFIDYGCDNALTIEGDILPS---DNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192 (497)
T ss_dssp HHHHHHHHTTTTCCEEEEEC---SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCccccc---CCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99999999888876543221 134567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+++++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 193 ~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl 272 (497)
T 3k2w_A 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADL 272 (497)
T ss_dssp HHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCH
Confidence 999999999 99999999999 668899999997 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 273 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~ 322 (497)
T 3k2w_A 273 DKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGD 322 (497)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 16
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=5e-61 Score=451.34 Aligned_cols=285 Identities=18% Similarity=0.257 Sum_probs=268.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 61 t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 139 (516)
T 1uzb_A 61 PSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAI 139 (516)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.++.... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~ 217 (516)
T 1uzb_A 140 DFIEYYARAALRYRYPAVEV--VPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGA 217 (516)
T ss_dssp HHHHHHHHHHGGGCSSCCCC--CCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc--cCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHH
Confidence 99999999998887643210 1123456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------ccCCceEEeCCCCCcEEE
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~------~~~~~~~~e~gg~~~~iv 234 (300)
.+++++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||
T Consensus 218 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV 297 (516)
T 1uzb_A 218 KVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297 (516)
T ss_dssp HHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeE
Confidence 999999999 99999999999 677899999997 999999999999999999998 789999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCCC
Q 022269 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIYS 292 (300)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~~ 292 (300)
++|||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+.
T Consensus 298 ~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 354 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354 (516)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999 999999999999999999999999999999999998764
No 17
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=6.2e-61 Score=448.11 Aligned_cols=281 Identities=23% Similarity=0.325 Sum_probs=264.4
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++..+.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++..|+..++
T Consensus 50 tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~ 129 (497)
T 3i44_A 50 TEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGS 129 (497)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999756999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEE-eecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIV-PEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~ 162 (300)
+.++++++....+...... ..+...++. ++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 130 ~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (497)
T 3i44_A 130 SHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204 (497)
T ss_dssp HHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHH
T ss_pred HHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHH
Confidence 9999999887765432211 024456777 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 163 ~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD 284 (497)
T 3i44_A 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD 284 (497)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh
Confidence 9999999999 99999999999 668999999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++|+|||+++||+|+++|.++++++++|+
T Consensus 285 -~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 285 -IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp -TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred -HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 18
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.8e-61 Score=450.72 Aligned_cols=283 Identities=22% Similarity=0.290 Sum_probs=267.4
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh---hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA---SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVA 80 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~---~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~ 80 (300)
++|++++++.++.+|++.++++|++||+ .|+.++..+|.++|+++++.|++++++|+++++.|+|||..++...|+.
T Consensus 44 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~ 123 (500)
T 1o04_A 44 TGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLD 123 (500)
T ss_dssp TTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5789999999999999999999999999 8999999999999999999999999999999999999999987656999
Q ss_pred HHHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChH
Q 022269 81 LLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (300)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~ 160 (300)
.+++.++|+++..+++.++.... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 124 ~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 199 (500)
T 1o04_A 124 MVLKCLRYYAGWADKYHGKTIPI----DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199 (500)
T ss_dssp HHHHHHHHHHHHTTTCCEEEECC----SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHHHhhCcceec----CCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChH
Confidence 99999999999888876543211 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHh-ccCCceEEeCCCCCcEEEcC
Q 022269 161 SSSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA-KHLTPVLLELGGKSPVVFDS 236 (300)
Q Consensus 161 ~~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~-~~~~~~~~e~gg~~~~iv~~ 236 (300)
++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++
T Consensus 200 t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~ 279 (500)
T 1o04_A 200 TALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMS 279 (500)
T ss_dssp HHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECC
Confidence 999999999999 99999999999 677899999997 999999999999999999999 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 280 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 333 (500)
T 1o04_A 280 DADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGN 333 (500)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred CCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999 99999999999999999999999999999999999875
No 19
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-61 Score=450.45 Aligned_cols=283 Identities=18% Similarity=0.208 Sum_probs=264.9
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~ 129 (521)
T 4e4g_A 51 TGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGL 129 (521)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 4999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+...+... . ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 130 ~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~ 206 (521)
T 4e4g_A 130 EVCEFVIGIPHLQKSEFT-E--GAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206 (521)
T ss_dssp HHHHHHHTHHHHTCEEEE-E--EEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHH
T ss_pred HHHHHHHHHHHHhcCccc-c--cCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999998876554433221 1 1123556889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~ 286 (521)
T 4e4g_A 207 RLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLD 286 (521)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHH
Confidence 999999999 99999999999888889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCC-chHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|++++++|||++ ++|+|+++|.++++++++|+
T Consensus 287 ~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~ 336 (521)
T 4e4g_A 287 QAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGP 336 (521)
T ss_dssp HHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCC
Confidence 99999999999 999999999999999999 99999999999999999876
No 20
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-60 Score=449.33 Aligned_cols=282 Identities=24% Similarity=0.307 Sum_probs=266.9
Q ss_pred ccccccccCCCHHHHHHHHHHHHHhh--hhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 5 EETKKKNEVFDAEAASLFVKELRGTF--ASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 5 ~e~~~~~~~~~~~~~~~a~~~A~~a~--~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
+|++++++.++.+|++.++++|++|| ..|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++ ..|+..+
T Consensus 49 g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~ 127 (528)
T 3u4j_A 49 GEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFC 127 (528)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHH
Confidence 78999999999999999999999999 78999999999999999999999999999999999999999999 4699999
Q ss_pred HHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH
Q 022269 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (300)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~ 162 (300)
++.++|+++..+.+.+.... . ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~ 204 (528)
T 3u4j_A 128 ADLWSYAAGQARALEGQTHN-N--IGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTS 204 (528)
T ss_dssp HHHHHHHHHHHTTCCEEEEC-C--SCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCeeec-c--CCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHH
Confidence 99999999998887643321 1 11356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 163 ~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
..+++++.++ +|+|++|+++| +.+.++.|+.|+ ||.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 205 ~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dAD 284 (528)
T 3u4j_A 205 IRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADAD 284 (528)
T ss_dssp HHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSC
T ss_pred HHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCC
Confidence 9999999999 99999999999 678999999997 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 285 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 285 LDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999 99999999999999999999999999999999999865
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6.9e-61 Score=449.96 Aligned_cols=283 Identities=22% Similarity=0.245 Sum_probs=266.3
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 51 tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 129 (515)
T 2d4e_A 51 TNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAA 129 (515)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+... +.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 130 ~~l~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 206 (515)
T 2d4e_A 130 ENFAFYAEYAEHAMEDRT-FPV--DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206 (515)
T ss_dssp HHHHHHHTTGGGTTCEEE-CCB--TTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHH
Confidence 999999988877654321 111 23456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.++++++++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 207 ~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl 286 (515)
T 2d4e_A 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADL 286 (515)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCH
Confidence 999999999 99999999999 467899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 287 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 336 (515)
T 2d4e_A 287 ERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGH 336 (515)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCC
Confidence 999999999999 99999999999999999999999999999999999875
No 22
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-61 Score=448.20 Aligned_cols=283 Identities=25% Similarity=0.313 Sum_probs=266.6
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh--hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA--SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVAL 81 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~ 81 (300)
++|++++++.++.+|++.++++|++||+ .|+.+|..+|.++|+++++.|++++++|+++++.|+|||..+++..|+..
T Consensus 33 tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~ 112 (495)
T 3b4w_A 33 TGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG 112 (495)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999996459999
Q ss_pred HHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHH
Q 022269 82 LKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (300)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~ 161 (300)
+++.++|++...+++.+... +. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 113 ~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t 188 (495)
T 3b4w_A 113 SMGAMNYFAGAADKVTWTET-RT---GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188 (495)
T ss_dssp HHHHHHHHHTCGGGSCSEEE-EE---ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHH
T ss_pred HHHHHHHHHHHHHHhcCCcc-cC---CCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHH
Confidence 99999999988887765431 11 123467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 162 SSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 162 ~~~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
+..+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||
T Consensus 189 ~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dAD 268 (495)
T 3b4w_A 189 ANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVD 268 (495)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCC
T ss_pred HHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCC
Confidence 99999999999 99999999999777899999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 269 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 319 (495)
T 3b4w_A 269 LAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGP 319 (495)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCC
T ss_pred HHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999 99999999999999999999999999999999999875
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=9.8e-61 Score=446.15 Aligned_cols=284 Identities=23% Similarity=0.282 Sum_probs=266.6
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
+.|++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 109 (479)
T 2imp_A 31 TEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTA 109 (479)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+.... . ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 110 ~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 186 (479)
T 2imp_A 110 DYIDYMAEWARRYEGEIIQ-S--DRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186 (479)
T ss_dssp HHHHHHHTTTTTCCCEEEC-C--SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhCCccc-c--CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 9999999887776554321 1 123456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~-~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+||+||+||++|||+
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 266 (479)
T 2imp_A 187 AFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADL 266 (479)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCH
Confidence 999999999 999999999994 56889999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIYS 292 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~~ 292 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+.
T Consensus 267 ~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 317 (479)
T 2imp_A 267 ELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNP 317 (479)
T ss_dssp HHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCc
Confidence 999999999999 999999999999999999999999999999999998764
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.4e-60 Score=446.44 Aligned_cols=285 Identities=22% Similarity=0.309 Sum_probs=265.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 36 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~ 114 (505)
T 3prl_A 36 SGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTA 114 (505)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCcc--CCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPAS 161 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~ 161 (300)
+.++|+++..+++.+......... ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.+
T Consensus 115 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t 194 (505)
T 3prl_A 115 DIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLS 194 (505)
T ss_dssp HHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHH
T ss_pred HHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 999999999988765432211100 003457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCC
Q 022269 162 SSLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (300)
Q Consensus 162 ~~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~da 238 (300)
+..+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.++ ++|+++|+|||||+||++||
T Consensus 195 a~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 272 (505)
T 3prl_A 195 GIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDA 272 (505)
T ss_dssp HHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTC
T ss_pred HHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCC
Confidence 99999999999 99999999999 567889999996 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCCC
Q 022269 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIYS 292 (300)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~~ 292 (300)
|++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+.
T Consensus 273 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 325 (505)
T 3prl_A 273 DLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP 325 (505)
T ss_dssp CHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred CHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCC
Confidence 99999999999999 999999999999999999999999999999999998764
No 25
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.9e-60 Score=442.86 Aligned_cols=282 Identities=20% Similarity=0.300 Sum_probs=267.9
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 16 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 94 (462)
T 3etf_A 16 TGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSA 94 (462)
T ss_dssp TCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++++++....+.++.. ....+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.
T Consensus 95 ~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~ 170 (462)
T 3etf_A 95 ALCDWYAEHGPAMLNPEP----TLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQ 170 (462)
T ss_dssp HHHHHHHHHHHHHTSCEE----CSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHhHHHhcCCcc----cCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHH
Confidence 999999998888765441 1123556889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++
T Consensus 171 ~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~ 250 (462)
T 3etf_A 171 MIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLE 250 (462)
T ss_dssp HHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHH
Confidence 999999999 99999999999888889999996 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 251 ~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 299 (462)
T 3etf_A 251 LAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGD 299 (462)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999 99999999999999999999999999999999999876
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.4e-60 Score=445.37 Aligned_cols=283 Identities=22% Similarity=0.292 Sum_probs=265.9
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++. |+..++
T Consensus 35 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~ 113 (487)
T 2w8n_A 35 SGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSA 113 (487)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..++..+... ... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 114 ~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 190 (487)
T 2w8n_A 114 FFLEWFSEEARRVYGDII-HTP--AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190 (487)
T ss_dssp HHHHHHHHHGGGCCCEEE-CCS--CTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988876543321 111 23567789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEe---C-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCC
Q 022269 164 LLAKLVGEY-MDLSSIRVVE---G-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~---~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~d 237 (300)
.+.+++.++ +|+|++|+++ | +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 191 ~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~d 270 (487)
T 2w8n_A 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDS 270 (487)
T ss_dssp HHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCC
Confidence 999999999 9999999999 7 567889999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhc-CCCCC
Q 022269 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSL-NPCIY 291 (300)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~-l~~~~ 291 (300)
||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.+++++ +++|+
T Consensus 271 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~ 324 (487)
T 2w8n_A 271 ANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGN 324 (487)
T ss_dssp SCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSC
T ss_pred CCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCC
Confidence 999999999999999 999999999999999999999999999999999 98876
No 27
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.1e-60 Score=447.94 Aligned_cols=279 Identities=24% Similarity=0.238 Sum_probs=263.6
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++ |+..++
T Consensus 39 tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~ 115 (517)
T 3r31_A 39 TGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPT 115 (517)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHh----hcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCCh
Q 022269 84 TSIKSALKELKH----WMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAP 159 (300)
Q Consensus 84 ~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~ 159 (300)
+.+++++...+. ..+.. ... ..+. .++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 116 ~~~~~~a~~~~~~~~~~~g~~-~~~---~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 190 (517)
T 3r31_A 116 SGADAFEFFGGIAPSALNGDY-IPL---GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTP 190 (517)
T ss_dssp HHHHHHHHHHHHHHHHTCCCE-EEC---SSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHHHHHHHHhhhccccccCcc-ccc---CCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccH
Confidence 999999988876 32222 111 1344 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCC
Q 022269 160 ASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (300)
Q Consensus 160 ~~~~~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~d 237 (300)
.++..+.+++.++ +|+|++|+++|+.+.+..|+.|+ ||.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 191 ~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~d 270 (517)
T 3r31_A 191 LGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDD 270 (517)
T ss_dssp SHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecC
Confidence 9999999999999 99999999999888999999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 271 ADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 271 ADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp SCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred CCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999 99999999999999999999999999999999999876
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.3e-60 Score=442.09 Aligned_cols=279 Identities=24% Similarity=0.320 Sum_probs=264.0
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 21 tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~ 99 (486)
T 3pqa_A 21 SLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSI 99 (486)
T ss_dssp TCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999974 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+++.+..... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 100 ~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 174 (486)
T 3pqa_A 100 GTFKLAAFYVKEHRDEVIPS-----DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCI 174 (486)
T ss_dssp HHHHHHHHHHHHCCEEEECC-----TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCceecC-----CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHH
Confidence 99999999998876543211 2567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-----cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcC
Q 022269 164 LLAKLVGEY-----MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (300)
Q Consensus 164 ~l~~~l~~a-----~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~ 236 (300)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++|+++|+|||||+||++
T Consensus 175 ~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~ 252 (486)
T 3pqa_A 175 ELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FKKIALELGGVNPNIVLK 252 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SSEEEEECCCCEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CCceeeccCCcCcEEEcC
Confidence 999999987 99999999999 456789999996 999999999999999999887 799999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 253 dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 306 (486)
T 3pqa_A 253 DADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGN 306 (486)
T ss_dssp TSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999 99999999999999999999999999999999999876
No 29
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=3e-60 Score=443.09 Aligned_cols=283 Identities=22% Similarity=0.302 Sum_probs=265.6
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 34 t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~ 112 (481)
T 3jz4_A 34 NGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAA 112 (481)
T ss_dssp TCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++....+..+.... ....+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++.
T Consensus 113 ~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 189 (481)
T 3jz4_A 113 SFIEWFAEEGKRIYGDTIP---GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189 (481)
T ss_dssp HHHHHHHHHGGGCCEEEEC---CSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCcccc---ccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 9999988876655432211 1123567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||+
T Consensus 190 ~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 269 (481)
T 3jz4_A 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADL 269 (481)
T ss_dssp HHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCH
T ss_pred HHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCH
Confidence 999999999 99999999999 678899999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 270 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 319 (481)
T 3jz4_A 270 DKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGD 319 (481)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSC
T ss_pred HHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 30
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=4.3e-60 Score=439.82 Aligned_cols=277 Identities=41% Similarity=0.672 Sum_probs=254.8
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHH
Q 022269 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (300)
Q Consensus 11 ~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (300)
.+..+.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++..|+..+++.+++++
T Consensus 12 ~~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 12 PRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ------CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999999999999999999999999999999999997679999999999999
Q ss_pred HHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHh
Q 022269 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (300)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~ 170 (300)
+.++.|..+..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 99988876544332222335678999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcEEEEeCChhhHHHHHhCCCCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHHHHHHHHHH
Q 022269 171 EYMDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMG 250 (300)
Q Consensus 171 ~a~p~~~i~~~~~~~~~~~~l~~~~v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~aa~~i~~~ 250 (300)
+++|+|++|+++|+.+....|+.|++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 172 ~alP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 172 QYLDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp HHSCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred HhCCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 99999999999997777788888889999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCC
Q 022269 251 KWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNP 288 (300)
Q Consensus 251 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~ 288 (300)
+| .|+||.|++++++|||++++|+|+++|.++++++.
T Consensus 252 ~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 288 (469)
T 3sza_A 252 KF-MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY 288 (469)
T ss_dssp HH-GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH
T ss_pred HH-hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc
Confidence 99 99999999999999999999999999999998873
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.1e-59 Score=440.67 Aligned_cols=283 Identities=16% Similarity=0.135 Sum_probs=262.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 46 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 124 (500)
T 2j6l_A 46 NNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYV 124 (500)
T ss_dssp TTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999995 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+++.+... . ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 125 ~~~~~~a~~~~~~~g~~~-~--~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 201 (500)
T 2j6l_A 125 DICDYAVGLSRMIGGPIL-P--SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISV 201 (500)
T ss_dssp HHHHHHHHHTTTCCCBEE-C--CSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCccc-c--ccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHH
Confidence 999999887776543321 1 1112344678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----h-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCC
Q 022269 164 LLAKLVGE----Y-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSG 237 (300)
Q Consensus 164 ~l~~~l~~----a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~d 237 (300)
.+.+++.+ + +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 202 ~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~d 281 (500)
T 2j6l_A 202 AVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFED 281 (500)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTT
T ss_pred HHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCC
Confidence 99888764 5 99999999999777899999996 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
||++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 282 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 282 ADLSLVVPSALFAAV-GTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp CCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999999999999999 99999999999999999999999999999999999876
No 32
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.7e-59 Score=438.72 Aligned_cols=282 Identities=21% Similarity=0.337 Sum_probs=265.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 29 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 107 (490)
T 3ju8_A 29 GQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMV 107 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999999999999999997 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+.+.+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (490)
T 3ju8_A 108 NKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183 (490)
T ss_dssp HHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHH
Confidence 99999998887775543221 12345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCce-EEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPV-LLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~-~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++|+.+.++.|+.|+ +|.|.||||+.+|+.|.+.++++++|+ ++|+|||||+||++|||+
T Consensus 184 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl 263 (490)
T 3ju8_A 184 LTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADL 263 (490)
T ss_dssp HHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCH
T ss_pred HHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCH
Confidence 999999999 99999999999888999999996 999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCc-hHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDY-APKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||+++ +|+|+++|.++++++++|+
T Consensus 264 ~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~ 314 (490)
T 3ju8_A 264 DAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGR 314 (490)
T ss_dssp HHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCC
Confidence 999999999999 9999999999999999996 9999999999999999876
No 33
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9.3e-60 Score=440.97 Aligned_cols=283 Identities=23% Similarity=0.282 Sum_probs=267.1
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|.+++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++..|+..++
T Consensus 31 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 110 (490)
T 2ve5_A 31 NGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGA 110 (490)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999755999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|+++..+.+.+... +. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 111 ~~~~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~ 186 (490)
T 2ve5_A 111 DVLEYYAGLVPAIEGEQI-PL---RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186 (490)
T ss_dssp HHHHHHHHHGGGCCEEEE-EE---ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhcCccc-cC---CCCceeeEeeccccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence 999999988877643322 11 24567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHH-hccCCceEEeCCCCCcEEEcCCCC
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAA-AKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~-~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.+ +++++|+++|+|||||+||++|||
T Consensus 187 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dAD 266 (490)
T 2ve5_A 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDAD 266 (490)
T ss_dssp HHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSC
T ss_pred HHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhccccceEEEcCCCceeEECCCCC
Confidence 999999999 99999999999 678999999997 99999999999999999999 889999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 267 l~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 317 (490)
T 2ve5_A 267 LDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGD 317 (490)
T ss_dssp HHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999 99999999999999999999999999999999999876
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=9.8e-60 Score=438.97 Aligned_cols=281 Identities=21% Similarity=0.295 Sum_probs=263.5
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++..+.+|++.++++|++||+.|+.+|.++|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..++
T Consensus 27 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~ 105 (475)
T 1euh_A 27 SGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTA 105 (475)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCC----Cce-EEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCC
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFP----SSA-EIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVA 158 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~ 158 (300)
+.++|+++..+++.+.... .. ..+ ... ++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 106 ~~~~~~a~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~t 182 (475)
T 1euh_A 106 EIINYAAEEGLRMEGEVLE-GG--SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQG 182 (475)
T ss_dssp HHHHHHHHHHTTCCEEEEE-GG--GTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTT
T ss_pred HHHHHHHHHHHHhcCCccc-CC--CCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcC
Confidence 9999999988877654321 11 123 456 899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCcEEEEeCC-hhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEc
Q 022269 159 PASSSLLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (300)
Q Consensus 159 ~~~~~~l~~~l~~a-~p~~~i~~~~~~-~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~ 235 (300)
|.++..+.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+++.|.+.++ ++|+++|+|||||+||+
T Consensus 183 p~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~ 260 (475)
T 1euh_A 183 SISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVL 260 (475)
T ss_dssp HHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT--TSCEEEECCCCEEEEEC
T ss_pred hHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC--CCcEEEEcCCcCeEEEC
Confidence 99999999999999 999999999995 56889999996 999999999999999999887 79999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+|||++.|++.+++++| .|+||.|++++++|||++++++|+++|.++++++++|+
T Consensus 261 ~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 261 EDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp TTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred CCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999 99999999999999999999999999999999999876
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.1e-59 Score=440.52 Aligned_cols=283 Identities=20% Similarity=0.239 Sum_probs=262.9
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhh-hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFA-SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~-~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
++|++++++..+.+|++.++++|++||+ .|+.+|..+|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 41 tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~ 119 (501)
T 1uxt_A 41 DLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAA 119 (501)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 5789999999999999999999999999 99999999999999999999999999999999999999999997 599999
Q ss_pred HHHHHHHHHHHHhhcccccccCCccCC--CCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChH
Q 022269 83 KTSIKSALKELKHWMTPEKAKTSITTF--PSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPA 160 (300)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~ 160 (300)
++.++|++...+++.+... ....... +...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 120 ~~~l~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~ 198 (501)
T 1uxt_A 120 VDRLRLAELDLKKIGGDYI-PGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPL 198 (501)
T ss_dssp HHHHHTGGGGGGGTCCEEE-ESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCH
T ss_pred HHHHHHHHHHHHHhcCccc-cccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchH
Confidence 9999999888877644321 1110011 236789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCC
Q 022269 161 SSSLLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI 238 (300)
Q Consensus 161 ~~~~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~da 238 (300)
++..+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++|+++|+|||||+||++||
T Consensus 199 t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dA 276 (501)
T 1uxt_A 199 PAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG--VKQYVMELGGGDPAIVLEDA 276 (501)
T ss_dssp HHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCC
Confidence 999999999999 99999999999557889999996 999999999999999999887 89999999999999999999
Q ss_pred CHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 239 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 239 d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|++.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 277 Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 328 (501)
T 1uxt_A 277 DLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGD 328 (501)
T ss_dssp CHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred CHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCC
Confidence 99999999999999 99999999999999999999999999999999999875
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=8.1e-60 Score=440.10 Aligned_cols=279 Identities=24% Similarity=0.309 Sum_probs=264.0
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++..+.+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++..|+..++
T Consensus 32 tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~ 111 (478)
T 3ty7_A 32 TEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGL 111 (478)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999556999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++++++..+.+.... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 112 ~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 183 (478)
T 3ty7_A 112 NHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAV 183 (478)
T ss_dssp HHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHhhccc--------CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHH
Confidence 99999999888775432 1346788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINL 240 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~ 240 (300)
.+.+++.++ +|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|+.|.+.++++++|+++|+||+||+||++|||+
T Consensus 184 ~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl 263 (478)
T 3ty7_A 184 ILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDI 263 (478)
T ss_dssp HHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCH
T ss_pred HHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCH
Confidence 999999999 99999999999 668999999996 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 241 KVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 241 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
+.|++.+++++| .|+||.|++++++|||++++|+|+++|.++++++++|+
T Consensus 264 ~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 313 (478)
T 3ty7_A 264 KEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGN 313 (478)
T ss_dssp HHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999 99999999999999999999999999999999999876
No 37
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-59 Score=439.84 Aligned_cols=283 Identities=22% Similarity=0.308 Sum_probs=264.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 37 tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~ 115 (508)
T 3r64_A 37 DDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAG 115 (508)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999976 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH-
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~- 162 (300)
+.+++++...+...+ . .+.. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 116 ~~~~~~a~~~~~~~~-~-~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 192 (508)
T 3r64_A 116 NITKESASFPGRVHG-R-ISPS-NTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192 (508)
T ss_dssp HHHHHHTTSTTTCCE-E-EECC-SSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHT
T ss_pred HHHHHHHHHhhhhcC-c-cccc-CCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHH
Confidence 999988876665433 1 1111 12356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhc--cCCceEEeCCCCCcEEEcCC
Q 022269 163 SLLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAK--HLTPVLLELGGKSPVVFDSG 237 (300)
Q Consensus 163 ~~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~--~~~~~~~e~gg~~~~iv~~d 237 (300)
..+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.||||+.+++.|.+.+++ +++|+++|+||+||+||++|
T Consensus 193 ~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~d 272 (508)
T 3r64_A 193 VIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLAD 272 (508)
T ss_dssp HHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCC
Confidence 9999999999 99999999999 478999999996 9999999999999999999998 89999999999999999999
Q ss_pred CCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 238 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 238 ad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
||++.|++.+++++| .|+||.|+++++||||++++|+|+++|.++++++++|+
T Consensus 273 ADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 273 ADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp SCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999 99999999999999999999999999999999999876
No 38
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.6e-59 Score=438.89 Aligned_cols=284 Identities=21% Similarity=0.273 Sum_probs=261.7
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
+.|++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. |+..++
T Consensus 31 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~ 109 (485)
T 4dng_A 31 DQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTI 109 (485)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999976 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH-
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS- 162 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~- 162 (300)
+.+++++...+...+... .. ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 110 ~~~~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 187 (485)
T 4dng_A 110 AILDEAMTYTGELGGVKE-VP-SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187 (485)
T ss_dssp HHHHHHHHHGGGCSCEEC-CC-CSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHT
T ss_pred HHHHHHHHHHHHhCCeec-cc-cCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHH
Confidence 999999988775433221 11 112356789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh-cCCCcEEEEeCCh-hhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCC
Q 022269 163 SLLAKLVGEY-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGIN 239 (300)
Q Consensus 163 ~~l~~~l~~a-~p~~~i~~~~~~~-~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad 239 (300)
..+.+++.++ +|+|++|+++|+. +.+..|+.|+ ++.|.||||+.+++.|.+.++++++|+++|+||+||+||++|||
T Consensus 188 ~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dAD 267 (485)
T 4dng_A 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDAD 267 (485)
T ss_dssp HHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSC
T ss_pred HHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCC
Confidence 9999999999 9999999999954 5889999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++.|++.+++++| .|+||.|+++++||||++++|+|+++|.++++++++|+
T Consensus 268 l~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 318 (485)
T 4dng_A 268 VDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318 (485)
T ss_dssp HHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999 99999999999999999999999999999999999876
No 39
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-59 Score=438.23 Aligned_cols=282 Identities=19% Similarity=0.206 Sum_probs=262.5
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
++|++++++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++ .|+..++
T Consensus 30 t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~ 108 (486)
T 1t90_A 30 TKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGI 108 (486)
T ss_dssp TCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.+++++...+...+.. ... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.
T Consensus 109 ~~~~~~a~~~~~~~g~~-~~~--~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 185 (486)
T 1t90_A 109 ENVEFAAGAPSLMMGDS-LAS--IATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185 (486)
T ss_dssp HHHHHHTTHHHHHCEEE-EEE--EETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHH
T ss_pred HHHHHHHHHHHHhcCcc-ccc--CCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence 99998876554433322 111 123456789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLK 241 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~ 241 (300)
.+.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+.+++.|.+.++++++|+++|+||+||+||++|||++
T Consensus 186 ~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~ 265 (486)
T 1t90_A 186 KLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLE 265 (486)
T ss_dssp HHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHH
T ss_pred HHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHH
Confidence 999999999 99999999999778899999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCE-EEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDH-IITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.|++.+++++| .|+||.|+++++ +|||++ +|+|+++|.++++++++|+
T Consensus 266 ~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~ 314 (486)
T 1t90_A 266 DTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGN 314 (486)
T ss_dssp HHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSC
T ss_pred HHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCC
Confidence 99999999999 999999999999 999999 9999999999999999876
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=5.5e-59 Score=433.81 Aligned_cols=282 Identities=24% Similarity=0.318 Sum_probs=263.0
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
+.|++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.... .|+...+
T Consensus 15 tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~--~ev~~~~ 92 (474)
T 4h7n_A 15 TGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV--LEIDSFL 92 (474)
T ss_dssp TCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH--HHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999985443 4999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.+++++.....+......... ..+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~ 170 (474)
T 4h7n_A 93 ASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVA 170 (474)
T ss_dssp HHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHH
T ss_pred HHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHH
Confidence 9999998888777654433222 23455678889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCChhhHHHHHhCCCCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHH
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGAVAETSALLDQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~~~~~~~l~~~~v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~ 242 (300)
.+.+++.++ +|+|++++++|+.+.+..|+.| ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.
T Consensus 171 ~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~ 249 (474)
T 4h7n_A 171 PLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLEL 249 (474)
T ss_dssp HHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHH
T ss_pred HHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHH
Confidence 999999999 9999999999988899999876 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|++.+++++| .|+||.|++++|+|||++++++|+++|.++++++++|+
T Consensus 250 aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 297 (474)
T 4h7n_A 250 ATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAY 297 (474)
T ss_dssp HHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCC
Confidence 9999999999 99999999999999999999999999999999999876
No 41
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=5.2e-59 Score=439.64 Aligned_cols=289 Identities=17% Similarity=0.133 Sum_probs=265.1
Q ss_pred ccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 5 EETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNER-EPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 5 ~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
+|++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+++ +++|+.+++.|+||+..+++..++..++
T Consensus 88 ~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~ 167 (563)
T 4e3x_A 88 AHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELI 167 (563)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHH
T ss_pred CcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999 9999999999999999999763499999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+++.+...... ..+...+.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.
T Consensus 168 ~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~ 243 (563)
T 4e3x_A 168 DFFRFNAKFAVELEGEQPISV---PPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASY 243 (563)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC---TTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhhCCCccCC---CCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHH
Confidence 999999999988866443221 1133456777888999999999999999999999999 599999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeCC-hhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCc------eEEeCCCCCcEEE
Q 022269 164 LLAKLVGEY-MDLSSIRVVEGA-VAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTP------VLLELGGKSPVVF 234 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~~-~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~------~~~e~gg~~~~iv 234 (300)
.+++++.++ +|+|++|+++|+ .+.++.|+.|+ ++.|.||||+.+|+.|.+.++++++| +++|+|||||+||
T Consensus 244 ~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV 323 (563)
T 4e3x_A 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFV 323 (563)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceee
Confidence 999999999 999999999994 56789999996 99999999999999999999998885 9999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCCC--CCCCCC
Q 022269 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIYS--PPKPFF 298 (300)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~~--~~~~~~ 298 (300)
++|||++.|++.+++++| .|+||.|++++|+|||+++||+|+++|.++++++++|+. ++.+++
T Consensus 324 ~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~ 388 (563)
T 4e3x_A 324 HSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFF 388 (563)
T ss_dssp CTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSB
T ss_pred CCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCcc
Confidence 999999999999999999 999999999999999999999999999999999999873 444443
No 42
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=3e-58 Score=432.22 Aligned_cols=285 Identities=15% Similarity=0.184 Sum_probs=259.2
Q ss_pred ccccc-ccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 4 EEETK-KKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 4 ~~e~~-~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
++|++ ++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 16 tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~ 94 (510)
T 1ez0_A 16 TGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT-GEIART 94 (510)
T ss_dssp TSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 56889 7999999999999999999999999999999999999999999999999999999999999998885 499999
Q ss_pred HHHHHHHHHHHHh--hcccccccC-CccCC-C-CceEEEeecCcEEEEEccCCcchhhhh--hHHHHHHHhCCEEEEeCC
Q 022269 83 KTSIKSALKELKH--WMTPEKAKT-SITTF-P-SSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (300)
Q Consensus 83 ~~~l~~~~~~~~~--~~~~~~~~~-~~~~~-~-~~~~~~~~p~Gvv~~i~p~n~P~~~~~--~~i~~ALaaGn~vvlkp~ 155 (300)
++.++|+++..++ +.+...... +.... + ...++.++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 95 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps 174 (510)
T 1ez0_A 95 ANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGH 174 (510)
T ss_dssp HHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECC
Confidence 9999999998876 544321110 10101 1 246889999999999999999999854 999999999999999999
Q ss_pred CCChHHHHHHHHHH----hhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccC--CceEEeC
Q 022269 156 EVAPASSSLLAKLV----GEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (300)
Q Consensus 156 ~~~~~~~~~l~~~l----~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~--~~~~~e~ 226 (300)
+.+|+++..+++++ .++ +|+|++|+++| +.+.+..|+.|+ ||.|.||||+.+|+.|.+.+++++ +|+++|+
T Consensus 175 ~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lEL 254 (510)
T 1ez0_A 175 TAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGEL 254 (510)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCCCccEEEEC
Confidence 99999999999998 456 89999999999 678899999997 999999999999999999999886 9999999
Q ss_pred CCCCcEEEcCCCCHH--HHHHHHHHHhcccCCCCeecCCCEEEEcCC-chHHHHHHHHHHHhcCCCC
Q 022269 227 GGKSPVVFDSGINLK--VACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLVRLLILETSLNPCI 290 (300)
Q Consensus 227 gg~~~~iv~~dad~~--~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~l~~l~~~ 290 (300)
|||||+||++|||++ .|++.+++++| .|+||.|++++++|||++ ++|+|+++|.++++++++|
T Consensus 255 GGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~g 320 (510)
T 1ez0_A 255 GAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPS 320 (510)
T ss_dssp CCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCCB
T ss_pred CCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCCC
Confidence 999999999999999 99999999999 999999999999999999 9999999999999999865
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-57 Score=428.77 Aligned_cols=285 Identities=16% Similarity=0.194 Sum_probs=259.3
Q ss_pred cccccc-cccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 4 EEETKK-KNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 4 ~~e~~~-~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
++|+++ +++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+
T Consensus 49 tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~ 127 (528)
T 3v4c_A 49 PAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRT 127 (528)
T ss_dssp CSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHH
T ss_pred CCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHH
Confidence 568888 999999999999999999999999999999999999999999999999999999999999999997 499999
Q ss_pred HHHHHHHHHHHHh--hccccccc---CCccCCCCceEEEeecCcEEEEEccCCcchhhhh--hHHHHHHHhCCEEEEeCC
Q 022269 83 KTSIKSALKELKH--WMTPEKAK---TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSL--DPVVGAIAAGNALVLKPS 155 (300)
Q Consensus 83 ~~~l~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~--~~i~~ALaaGn~vvlkp~ 155 (300)
++.++|+++..+. +.+..... ......+...++.++|+|||++|+|||||+...+ +++++||++||+||+|||
T Consensus 128 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps 207 (528)
T 3v4c_A 128 TGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207 (528)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECC
Confidence 9999999998887 43332211 0001123457899999999999999999999865 899999999999999999
Q ss_pred CCChHHHHHHHHHHh----hh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccC--CceEEeC
Q 022269 156 EVAPASSSLLAKLVG----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHL--TPVLLEL 226 (300)
Q Consensus 156 ~~~~~~~~~l~~~l~----~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~--~~~~~e~ 226 (300)
+.+|.++..+++++. ++ +|+|++|+++| +.+.+..|+.|+ ||.|.||||+.+|+.|.+.+++++ +|+++|+
T Consensus 208 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lEl 287 (528)
T 3v4c_A 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGEL 287 (528)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEec
Confidence 999999999998765 56 99999999999 568899999997 999999999999999999999998 9999999
Q ss_pred CCCCcEEEcCCC---CHHHHHHHHHHHhcccCCCCeecCCCEEEEcCC-chHHHHHHHHHHHhcCCCC
Q 022269 227 GGKSPVVFDSGI---NLKVACRRMIMGKWGCNNGQACISPDHIITTKD-YAPKLVRLLILETSLNPCI 290 (300)
Q Consensus 227 gg~~~~iv~~da---d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~l~~l~~~ 290 (300)
|||||+||++|| |++.|++.+++++| .|+||.|++++++|||++ ++|+|+++|++++++++.+
T Consensus 288 GGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~ 354 (528)
T 3v4c_A 288 GSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ 354 (528)
T ss_dssp CCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcccC
Confidence 999999999999 88999999999999 999999999999999998 9999999999999998753
No 44
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1.2e-57 Score=452.44 Aligned_cols=283 Identities=18% Similarity=0.249 Sum_probs=267.2
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLK 83 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~ 83 (300)
.++++++++.++.+|++.++++|++||+.|+.+|..+|.++|++++++|++++++|+.+++.|+|||..++.. |+..++
T Consensus 555 ~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai 633 (1026)
T 4f9i_A 555 PSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAI 633 (1026)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHH
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHH
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999975 999999
Q ss_pred HHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHH
Q 022269 84 TSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSS 163 (300)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~ 163 (300)
+.++|++...+.+.+...... ..+..+++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 634 d~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~ 710 (1026)
T 4f9i_A 634 DFLEYYAREMIRLGQPQRVGH---APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGW 710 (1026)
T ss_dssp HHHHHHHHHHHHHTSCEEECC---CTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccC---CCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHH
Confidence 999999999988765443221 24667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHh------ccCCceEEeCCCCCcEEE
Q 022269 164 LLAKLVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAA------KHLTPVLLELGGKSPVVF 234 (300)
Q Consensus 164 ~l~~~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~------~~~~~~~~e~gg~~~~iv 234 (300)
.+.++++++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|.+.++ ++++|+++|+||+||+||
T Consensus 711 ~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV 790 (1026)
T 4f9i_A 711 HLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIII 790 (1026)
T ss_dssp HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEE
T ss_pred HHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEE
Confidence 999999999 99999999999 567899999997 999999999999999999988 478999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
++|||++.|++.+++++| .|+||.|++++++|||++++++|+++|.+.++++++|+
T Consensus 791 ~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~ 846 (1026)
T 4f9i_A 791 DDDADLDEAVPHVLYSAF-GFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGP 846 (1026)
T ss_dssp CTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred CCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999 99999999999999999999999999999999999876
No 45
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.8e-56 Score=439.50 Aligned_cols=277 Identities=21% Similarity=0.282 Sum_probs=259.0
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHH
Q 022269 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (300)
Q Consensus 11 ~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (300)
++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+|||..++. .|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999996 49999999999999
Q ss_pred HHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHh
Q 022269 91 KELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVG 170 (300)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~ 170 (300)
...+.+.+..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 623 ~~a~~~~g~~~~~--~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAM--PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEEC--CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCccccc--cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9888775432111 11246678999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhcc---CCceEEeCCCCCcEEEcCCCCHHHHHH
Q 022269 171 EY-MDLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKH---LTPVLLELGGKSPVVFDSGINLKVACR 245 (300)
Q Consensus 171 ~a-~p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~---~~~~~~e~gg~~~~iv~~dad~~~aa~ 245 (300)
++ +|+|++|+++|+.+.+..|+.|+ |+.|.||||+.+|+.|.+.++++ ++|+++|+||+||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 99 99999999999654599999997 99999999999999999998864 899999999999999999999999999
Q ss_pred HHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 246 RMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 246 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
.+++++| .|+||.|++++++|||++++|+|+++|++.++++++|+
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGd 825 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGD 825 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999 99999999999999999999999999999999999876
No 46
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.3e-55 Score=416.51 Aligned_cols=282 Identities=15% Similarity=0.169 Sum_probs=251.8
Q ss_pred cccccccccCCCHHHHHHHHHHHHHh-hhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHH
Q 022269 4 EEETKKKNEVFDAEAASLFVKELRGT-FASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALL 82 (300)
Q Consensus 4 ~~e~~~~~~~~~~~~~~~a~~~A~~a-~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~ 82 (300)
++|++++++..+ +|++.++++|++| |+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++. |+..+
T Consensus 31 tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~ 108 (534)
T 2y53_A 31 TGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGG 108 (534)
T ss_dssp TCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHH
T ss_pred CCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHH
Confidence 578999999987 8999999999999 59999999999999999999999999999999999999999999975 99999
Q ss_pred HHHHHHHHHHHHhhcccccc---c-CCccCCCC-ceEEEeecC-cEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCC
Q 022269 83 KTSIKSALKELKHWMTPEKA---K-TSITTFPS-SAEIVPEPF-GVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSE 156 (300)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~ 156 (300)
++.+++++...+.+...... . .+....+. ..+..++|+ |||++|+|||||++..++++++||++||+||+|||+
T Consensus 109 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~ 188 (534)
T 2y53_A 109 IFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPAT 188 (534)
T ss_dssp HHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999998877665321110 0 01111122 457889997 999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh--cCCCcEEEEeCChhhHHHHHhC--CCCeEEEeCChHHHHHHHHHHh--ccCCceEEeCCCCC
Q 022269 157 VAPASSSLLAKLVGEY--MDLSSIRVVEGAVAETSALLDQ--KWDKICYTGNSRVARIVMAAAA--KHLTPVLLELGGKS 230 (300)
Q Consensus 157 ~~~~~~~~l~~~l~~a--~p~~~i~~~~~~~~~~~~l~~~--~v~~i~f~Gs~~~~~~i~~~~~--~~~~~~~~e~gg~~ 230 (300)
.+|+++..+.+++.++ +|+|++|+++|+.. .+..+ .+|.|.||||+.+|+.|.+.++ ++++|+++|+||||
T Consensus 189 ~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~ 265 (534)
T 2y53_A 189 ATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265 (534)
T ss_dssp GGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCE
T ss_pred cchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCC
Confidence 9999999999999997 59999999998432 14443 4999999999999999998875 78999999999999
Q ss_pred cEEEcCCC-----CHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCCCC
Q 022269 231 PVVFDSGI-----NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPCIY 291 (300)
Q Consensus 231 ~~iv~~da-----d~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~~~ 291 (300)
|+||++|| |++.|++.+++++| .|+||.|++++|+|||++++|+|+++|.++++++++|+
T Consensus 266 p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 330 (534)
T 2y53_A 266 SAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGN 330 (534)
T ss_dssp EEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBBC
T ss_pred eEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhccCCC
Confidence 99999999 99999999999999 99999999999999999999999999999999999875
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=7.8e-53 Score=390.21 Aligned_cols=261 Identities=17% Similarity=0.162 Sum_probs=225.1
Q ss_pred ccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHH
Q 022269 11 NEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSAL 90 (300)
Q Consensus 11 ~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~ 90 (300)
++.++.+|++.++++|++||+.|+.+|.++|.++|+++++.+++++++|++++++|+||+..+++..|+..+.+.+...
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~- 79 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNK- 79 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999755666666554211
Q ss_pred HHHHhhccccccc-CCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHH
Q 022269 91 KELKHWMTPEKAK-TSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLV 169 (300)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l 169 (300)
+ ...... ......+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++
T Consensus 80 --~----~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~ 153 (452)
T 3my7_A 80 --Y----KDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLV 153 (452)
T ss_dssp --H----TTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH
T ss_pred --h----hhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHH
Confidence 1 111111 111123455788999999999999999999999999999999999999999999999999888887
Q ss_pred h----hh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHH
Q 022269 170 G----EY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKV 242 (300)
Q Consensus 170 ~----~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~ 242 (300)
+ ++ +|+|++|++++ +.+.++.|+.|+ ++.|.||||+..+ +.++++++|+++|+||++|+||++|||++.
T Consensus 154 ~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 154 LDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 6 67 99999999999 678999999996 9999999999854 456677899999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHH
Q 022269 243 ACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILE 283 (300)
Q Consensus 243 aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 283 (300)
|++.+++++| +|+||.|++++++|||+++||+|+++|+++
T Consensus 230 Aa~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 230 AVASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 9999999999 999999999999999999999999998764
No 48
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=395.58 Aligned_cols=275 Identities=21% Similarity=0.161 Sum_probs=227.2
Q ss_pred CcccccccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhc-------CCCch---
Q 022269 3 SEEETKKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDL-------DKPEL--- 72 (300)
Q Consensus 3 ~~~e~~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~-------Gk~~~--- 72 (300)
.+.+.+++++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+ |||..
T Consensus 15 ~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl 94 (463)
T 2h5g_A 15 TENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRL 94 (463)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhh
Confidence 36789999999999999999999999999999999999999999999999999999999999999 79987
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEE
Q 022269 73 -ESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALV 151 (300)
Q Consensus 73 -~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vv 151 (300)
++. .|+..+++.++|++...+++.++.... .....+...++.++|+|||++|+||| |.... +++++||++||+||
T Consensus 95 ~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VV 170 (463)
T 2h5g_A 95 SLST-SKLNSLAIGLRQIAASSQDSVGRVLRR-TRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLL 170 (463)
T ss_dssp CCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEE-EEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEE
T ss_pred hhhH-HHHHHHHHHHHHHHHhhHhhcCccccc-ccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEE
Confidence 454 599999999999998887776543211 10013446789999999999999887 77766 89999999999999
Q ss_pred EeCCCCChHHHHHHHHHHhhhc----CCCcEEEEeCChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeC
Q 022269 152 LKPSEVAPASSSLLAKLVGEYM----DLSSIRVVEGAVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL 226 (300)
Q Consensus 152 lkp~~~~~~~~~~l~~~l~~a~----p~~~i~~~~~~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~ 226 (300)
+|||+.+|.++..+++++.+++ |+|++|+++|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++|+++|+
T Consensus 171 lKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv~lEl 248 (463)
T 2h5g_A 171 LKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPVMGHS 248 (463)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCBCSCS
T ss_pred EECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCEEEec
Confidence 9999999999999999999985 6999999999667889999997 999999999999999999887 89999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchH-HHHHHHHHHHh
Q 022269 227 GGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAP-KLVRLLILETS 285 (300)
Q Consensus 227 gg~~~~iv~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~-~f~~~l~~~l~ 285 (300)
|||||+||++|||++.|++.+++++| .| ||.|++++++|||++++| .+++++.+.+.
T Consensus 249 GGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~~ 306 (463)
T 2h5g_A 249 EGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLRTPLFDQIIDMLR 306 (463)
T ss_dssp CCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHHH
T ss_pred CCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccchHHHHHHHHHHH
Confidence 99999999999999999999999999 88 999999999999999997 46666655553
No 49
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.2e-52 Score=387.28 Aligned_cols=266 Identities=15% Similarity=0.166 Sum_probs=229.8
Q ss_pred cccccCCCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCchhhhHHHHHHHHHHHH
Q 022269 8 KKKNEVFDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIK 87 (300)
Q Consensus 8 ~~~~~~~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 87 (300)
+.+.+..+.+|++.++++|++||+.|+.++.++|.++|+++++.++++.++|++++++|+||+..+++..+...+++.+.
T Consensus 3 ~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 45566778899999999999999999999999999999999999999999999999999999998886544444444333
Q ss_pred HHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHH
Q 022269 88 SALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAK 167 (300)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~ 167 (300)
+. ++.. ..........+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~---~~~~---~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ 156 (464)
T 3k9d_A 83 NY---IKDM---KTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVR 156 (464)
T ss_dssp HH---HTTC---CCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHH
T ss_pred Hh---hhcc---cccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHH
Confidence 22 2211 10000111246678999999999999999999999999999999999999999999999999998665
Q ss_pred ----HHhhh-cCCCcEEEEeC-ChhhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCC-CCCcEEEcCCCC
Q 022269 168 ----LVGEY-MDLSSIRVVEG-AVAETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELG-GKSPVVFDSGIN 239 (300)
Q Consensus 168 ----~l~~a-~p~~~i~~~~~-~~~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~g-g~~~~iv~~dad 239 (300)
++.++ +|+|++|++++ +.+.+..|+.|+ +|.|.||||+.+ .+.++++++|+ +|+| ||+|+||++|||
T Consensus 157 ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dAD 231 (464)
T 3k9d_A 157 IISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSAN 231 (464)
T ss_dssp HHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSC
T ss_pred HHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCC
Confidence 45778 99999999999 678999999997 999999999984 55667788999 7888 999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHh
Q 022269 240 LKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETS 285 (300)
Q Consensus 240 ~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~ 285 (300)
++.|++.+++++| +|+||.|++++++|||+++||+|+++|+++..
T Consensus 232 l~~Aa~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~ 276 (464)
T 3k9d_A 232 IPRAVKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGA 276 (464)
T ss_dssp HHHHHHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhh
Confidence 9999999999999 99999999999999999999999999998763
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=3.6e-52 Score=384.69 Aligned_cols=265 Identities=17% Similarity=0.176 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCc----hhhhH-------HHHHHHHH
Q 022269 16 AEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALLKT 84 (300)
Q Consensus 16 ~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~~~ 84 (300)
.+|++.++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+||+. .+++. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999984 35543 26777778
Q ss_pred HHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHH
Q 022269 85 SIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSL 164 (300)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~ 164 (300)
.+++++...+.. + ...+......+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 105 ~l~~~a~~~~~~-g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDPI-G-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCCT-T-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhcccc-C-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 777765543211 1 1111111123567899999999999999998 8 6888999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCcEEEEeC-Chh-hHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEcC
Q 022269 165 LAKLV----GEY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDS 236 (300)
Q Consensus 165 l~~~l----~~a-~p~~~i~~~~~-~~~-~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~ 236 (300)
+.+++ .++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 677 99999999998 554 566666776 99999999999999998876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCC
Q 022269 237 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPC 289 (300)
Q Consensus 237 dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~ 289 (300)
|||++.|++.+++++| .|+| .|++++++|||++++|+|+++|.++++++++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 308 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGV 308 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999 9999 9999999999999999999999999999987
No 51
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=1.2e-52 Score=389.38 Aligned_cols=264 Identities=20% Similarity=0.197 Sum_probs=235.0
Q ss_pred HHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCc----hhhhHHHHHH-HHHHHHHHHH
Q 022269 17 EAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSIYEVAL-LKTSIKSALK 91 (300)
Q Consensus 17 ~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~~ 91 (300)
..++.++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||. .++...|+.. +++.++++++
T Consensus 14 ~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~ 93 (468)
T 1vlu_A 14 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQ 93 (468)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHH
Confidence 4588999999999999999999999999999999999999999999999999998 7875469988 9999999999
Q ss_pred HHHhhcccccc--cC-Ccc--CCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHH
Q 022269 92 ELKHWMTPEKA--KT-SIT--TFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLA 166 (300)
Q Consensus 92 ~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~ 166 (300)
..+.+...... .. +.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++
T Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~ 171 (468)
T 1vlu_A 94 GIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMA 171 (468)
T ss_dssp HHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHH
Confidence 88887632210 00 100 12445789999999999999999 9 999999999999999999999999999999999
Q ss_pred HHHh----h----h-cCCCcEEEEeCCh-hhHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEEc
Q 022269 167 KLVG----E----Y-MDLSSIRVVEGAV-AETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFD 235 (300)
Q Consensus 167 ~~l~----~----a-~p~~~i~~~~~~~-~~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~ 235 (300)
+++. + + +|+|++|+++ +. +.+..|..|+ +|.|.||||+.+++.|.+.+ ++|+++|+|||||+||+
T Consensus 172 ~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~ 247 (468)
T 1vlu_A 172 KIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD 247 (468)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC
T ss_pred HHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEEC
Confidence 9995 8 8 9999999999 55 6788899997 99999999999999999876 69999999999999999
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCC
Q 022269 236 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPC 289 (300)
Q Consensus 236 ~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~ 289 (300)
+|||++.|++.+++++| .|+| .|++++++|||+++ |+|+++|.++++++++
T Consensus 248 ~dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v 298 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGV 298 (468)
T ss_dssp TTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCC
Confidence 99999999999999999 9999 99999999999999 9999999999999987
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.9e-51 Score=376.92 Aligned_cols=267 Identities=17% Similarity=0.204 Sum_probs=230.8
Q ss_pred CCHHHHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCc----hhhhH-------HHHHHH
Q 022269 14 FDAEAASLFVKELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPE----LESSI-------YEVALL 82 (300)
Q Consensus 14 ~~~~~~~~a~~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~ 82 (300)
.-.++++.++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+||+. .++.. .|+..+
T Consensus 11 ~~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 11 HHMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 3446799999999999999999999999999999999999999999999999999885 55532 488888
Q ss_pred HHHHHHHHHHHHhhcccccccCCccCCCCceEEEeecCcEEEEEccCCcchhhhhhHHHHHHHhCCEEEEeCCCCChHHH
Q 022269 83 KTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS 162 (300)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~ 162 (300)
++.+++++...+. .+.. ........+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|.++
T Consensus 91 ~~~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 8888887654432 1111 11000012445788999999999999875 578899999999999999999999999999
Q ss_pred HHHHHHHh----hh-cCCCcEEEEeC-Chh-hHHHHHhCC-CCeEEEeCChHHHHHHHHHHhccCCceEEeCCCCCcEEE
Q 022269 163 SLLAKLVG----EY-MDLSSIRVVEG-AVA-ETSALLDQK-WDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVF 234 (300)
Q Consensus 163 ~~l~~~l~----~a-~p~~~i~~~~~-~~~-~~~~l~~~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv 234 (300)
..+.+++. ++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEE
Confidence 99999998 66 89999999998 544 566677776 99999999999999999887 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCCCeecCCCEEEEcCCchHHHHHHHHHHHhcCCC
Q 022269 235 DSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLVRLLILETSLNPC 289 (300)
Q Consensus 235 ~~dad~~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~l~~l~~ 289 (300)
++|||++.|++.+++++| .|+| .|++++++|||++++|+|+++|.++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 999999999999999999 9999 9999999999999999999999999999886
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=92.30 E-value=5.9 Score=35.34 Aligned_cols=243 Identities=13% Similarity=0.039 Sum_probs=132.1
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHh-cCCC------chhhhHHHHHH--------HHHHHHHHHHHHHhh
Q 022269 32 SGKTKSYGWRVSQLKSLMKMLNEREPDIVDALRQD-LDKP------ELESSIYEVAL--------LKTSIKSALKELKHW 96 (300)
Q Consensus 32 ~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~e-~Gk~------~~~a~~~ev~~--------~~~~l~~~~~~~~~~ 96 (300)
.|...+.++-.+....+.+.++++.|+-..-.++. -|.. +... ..|+.. ..+.++.+.++.+.+
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs-~~ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELP-RDVLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEEC-HHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecC-HHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 34555555566666677777777665544433332 1211 1111 124432 234566677777777
Q ss_pred cccccccCC--ccCCCCceEEEeecCcEEEEEccCC-cch-hhhhhHHHHHHHhCCEEE-E-eCCCCChHHHHHHHHHHh
Q 022269 97 MTPEKAKTS--ITTFPSSAEIVPEPFGVVLIISPWN-YPF-LLSLDPVVGAIAAGNALV-L-KPSEVAPASSSLLAKLVG 170 (300)
Q Consensus 97 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n-~P~-~~~~~~i~~ALaaGn~vv-l-kp~~~~~~~~~~l~~~l~ 170 (300)
...+..... ...+|......+.|+.-|+++.|.- +|+ .+++..++||-.+|+.=| + -|++........|.. .+
T Consensus 105 h~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~A-A~ 183 (423)
T 4gic_A 105 AERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAA-AY 183 (423)
T ss_dssp HHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHH-HH
T ss_pred HHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHH-HH
Confidence 655544322 1235667788999999999999953 333 344456899999999743 3 343322111222222 11
Q ss_pred hhcCCCcEEEEe-CChhhHHHHHh----CC-CCeEEEeCChHHHHHHHHHHhccCCceEEeC-CCCCcEEE--cCCCCHH
Q 022269 171 EYMDLSSIRVVE-GAVAETSALLD----QK-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLK 241 (300)
Q Consensus 171 ~a~p~~~i~~~~-~~~~~~~~l~~----~~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~-gg~~~~iv--~~dad~~ 241 (300)
.+ |+=.+.. |+.+...+|.- -+ ||.|+=.|+.-+...=+.-.+ .|-..+ .|.+=++| ++++|.+
T Consensus 184 l~---Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g----~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 184 IS---GVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG----QVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HH---TCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT----TBEECCCCCCCEEEEEECSCSCHH
T ss_pred hc---CCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC----CcCcccccccceEEEEeCCCCCHH
Confidence 12 2222332 24445555542 23 999998888876433222221 222222 35554444 5568999
Q ss_pred HHHHHHHHHhcccCCCCeecCCCEEEEcCC--chHHHHHHHHHHHhcCCC
Q 022269 242 VACRRMIMGKWGCNNGQACISPDHIITTKD--YAPKLVRLLILETSLNPC 289 (300)
Q Consensus 242 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~--~~~~f~~~l~~~l~~l~~ 289 (300)
.++.+++-.+= +.. ..+.++|..+ ..+++.+.+.+.++.++.
T Consensus 257 ~vAaDLlsQAE-Hd~-----~a~~iLvT~s~~la~~V~~~i~~~l~~l~r 300 (423)
T 4gic_A 257 WIAMDLFSQAE-HDE-----DAQAILISPDAAHLEAVQASIERLLPGMER 300 (423)
T ss_dssp HHHHHHHHHHT-TCT-----TCEEEEEESCHHHHHHHHHHHHHHGGGCTT
T ss_pred HHHHHHHHhhc-cCC-----CCeEEEEeCcHHHHHHHHHHHHHHHhhCcc
Confidence 99999998886 433 3455666555 346666667777766654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=72.31 E-value=54 Score=29.32 Aligned_cols=237 Identities=19% Similarity=0.164 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHhcCC----CchhhhHHHHH--------HHHHHHHHHHHHHHhhcccccccC-C
Q 022269 39 GWRVSQLKSLMKMLNEREPDIVDALRQDLDK----PELESSIYEVA--------LLKTSIKSALKELKHWMTPEKAKT-S 105 (300)
Q Consensus 39 ~~R~~~l~~~~~~l~~~~~~l~~~~~~e~Gk----~~~~a~~~ev~--------~~~~~l~~~~~~~~~~~~~~~~~~-~ 105 (300)
.+-.+..+.+.+.++++.|+-..-.++.--+ .+... ..|+. ...+.++.+.++++.+...+.... .
T Consensus 30 ~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs-~~ei~~A~~~~~~~~~~ai~~A~~nI~~fH~~Q~~~~~~ 108 (434)
T 1kae_A 30 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVS-AEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVD 108 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCC-HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccC-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 3444556666666666666544444332211 11222 12443 334566667777777776654432 1
Q ss_pred -ccCCCCceEEEeecCcEEEEEccC---CcchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEE
Q 022269 106 -ITTFPSSAEIVPEPFGVVLIISPW---NYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVV 181 (300)
Q Consensus 106 -~~~~~~~~~~~~~p~Gvv~~i~p~---n~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~~a~p~~~i~~~ 181 (300)
....|......+.|+.-|+++.|. -|| .+++..++||-.+|+.=|+-.+|-.. ....|.. .+.+ |+=.+.
T Consensus 109 ~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i-~p~iL~A-A~l~---Gv~eIy 182 (434)
T 1kae_A 109 VETQPGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPI-ADEILYA-AQLC---GVQDVF 182 (434)
T ss_dssp EEEETTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSC-CHHHHHH-HHHT---TCCEEE
T ss_pred EEecCCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCC-CHHHHHH-HHHc---CCCEEe
Confidence 123456677889999999999996 344 34455689999999976655433211 1111111 1112 222222
Q ss_pred e-CChhhHHHHHh---C-C-CCeEEEeCChHHHHHHHHHHhccCCceEEeC-CCCCcEEE--cCCCCHHHHHHHHHHHhc
Q 022269 182 E-GAVAETSALLD---Q-K-WDKICYTGNSRVARIVMAAAAKHLTPVLLEL-GGKSPVVF--DSGINLKVACRRMIMGKW 252 (300)
Q Consensus 182 ~-~~~~~~~~l~~---~-~-v~~i~f~Gs~~~~~~i~~~~~~~~~~~~~e~-gg~~~~iv--~~dad~~~aa~~i~~~~~ 252 (300)
. |+.+...+|.- . + ||.|+=.|..-+...=+.-... ...|-..+ .|.+=++| ++++|.+.++.+++-.+=
T Consensus 183 ~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~-~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 183 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp ECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC-TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh-cCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 2 34445555542 2 3 9999988887653221111000 12222222 35554444 566899999999998886
Q ss_pred ccCCCCeecCCCEEEEcCC--chHHHHHHHHHHHhcCCC
Q 022269 253 GCNNGQACISPDHIITTKD--YAPKLVRLLILETSLNPC 289 (300)
Q Consensus 253 ~~~~Gq~C~~~~~v~V~~~--~~~~f~~~l~~~l~~l~~ 289 (300)
++. ..+.++|-.+ ..++..+.+.+.+..++.
T Consensus 262 -Hd~-----~a~aiLvT~s~~la~~V~~ev~~ql~~lpr 294 (434)
T 1kae_A 262 -HGP-----DSQVILLTPAADMARRVAEAVERQLAELPR 294 (434)
T ss_dssp -TCT-----TCEEEEEESCHHHHHHHHHHHHHHHTTCTT
T ss_pred -cCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCCh
Confidence 433 3455566444 456677777777777764
No 55
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=63.22 E-value=24 Score=27.54 Aligned_cols=37 Identities=19% Similarity=0.290 Sum_probs=29.5
Q ss_pred HhCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCC
Q 022269 145 AAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA 184 (300)
Q Consensus 145 aaGn~vvlkp~~~~~~~~~~l~~~l~~a-~p~~~i~~~~~~ 184 (300)
.+||-+|+|-.|.. +..++.++... +|++++-.+.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999977555 88888888887 888788777763
No 56
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=59.98 E-value=16 Score=29.67 Aligned_cols=45 Identities=9% Similarity=0.186 Sum_probs=34.7
Q ss_pred hhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHhhhcCCCcEEEEeC
Q 022269 137 LDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEG 183 (300)
Q Consensus 137 ~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~~a~p~~~i~~~~~ 183 (300)
+..++..+.+||-||++.+. +.....+..++...+|.+.+++++.
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~ 65 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPY 65 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEE
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhcccc
Confidence 45677889999999999654 3445556777888899999998854
No 57
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=44.12 E-value=88 Score=24.04 Aligned_cols=34 Identities=9% Similarity=0.196 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhC----HHHHHHHHHHhcCCCchhh
Q 022269 40 WRVSQLKSLMKMLNER----EPDIVDALRQDLDKPELES 74 (300)
Q Consensus 40 ~R~~~l~~~~~~l~~~----~~~l~~~~~~e~Gk~~~~a 74 (300)
.|.+...++.++|.++ +++|.+.+..+ |..+.+|
T Consensus 17 ~K~~R~~~I~~iI~~~~I~tQeEL~~~L~~~-Gi~vTQA 54 (170)
T 3lap_A 17 NRAGRQARIVAILSSAQVRSQNELAALLAAE-GIEVTQA 54 (170)
T ss_dssp CHHHHHHHHHHHHHHSCCCSHHHHHHHHHHT-TCCCCHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHHHHHHHHc-CCCcCch
Confidence 3555566777778765 99999998887 8888777
No 58
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=38.93 E-value=22 Score=20.76 Aligned_cols=28 Identities=25% Similarity=0.423 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHhcC
Q 022269 41 RVSQLKSLMKMLNEREPDIVDALRQDLD 68 (300)
Q Consensus 41 R~~~l~~~~~~l~~~~~~l~~~~~~e~G 68 (300)
..++|..+...|.+-+++|++++..+..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999988876643
No 59
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=34.15 E-value=28 Score=25.51 Aligned_cols=46 Identities=20% Similarity=0.217 Sum_probs=30.4
Q ss_pred CcEEEEeCCh-hhHHHHHh-CCCCeEEEeCChHHHHHHHHHHhccCCc
Q 022269 176 SSIRVVEGAV-AETSALLD-QKWDKICYTGNSRVARIVMAAAAKHLTP 221 (300)
Q Consensus 176 ~~i~~~~~~~-~~~~~l~~-~~v~~i~f~Gs~~~~~~i~~~~~~~~~~ 221 (300)
|.+.+++|+. +....++. .++.+++++|+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 5677777744 44444454 4588999999987777777776654344
No 60
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=33.76 E-value=76 Score=23.93 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=67.4
Q ss_pred cEEEEEccCC-cchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHhh-h-cCCCcEEEEeC-ChhhHHHHHhC-C
Q 022269 121 GVVLIISPWN-YPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-Y-MDLSSIRVVEG-AVAETSALLDQ-K 195 (300)
Q Consensus 121 Gvv~~i~p~n-~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~~-a-~p~~~i~~~~~-~~~~~~~l~~~-~ 195 (300)
|.++++..-+ =+-...+..-...++.|..++-- ..|+ +.+++ . ++-..++-++. +......++.. .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~ge 82 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALISEGK 82 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHCCC
Confidence 6555444433 34444455666677789988763 2334 44555 5 77544432222 22233444444 6
Q ss_pred CCeEEEeCC-------hHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHHHHHHHHHHhcccCCC
Q 022269 196 WDKICYTGN-------SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 257 (300)
Q Consensus 196 v~~i~f~Gs-------~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~aa~~i~~~~~~~~~G 257 (300)
|+.|+|+-+ ...+..|.+.+..+-.|+..-+ ..++.++.+.+ ++..
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 999999876 4577889998887767755333 55667788877 6554
No 61
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=30.73 E-value=79 Score=19.58 Aligned_cols=36 Identities=8% Similarity=-0.031 Sum_probs=26.1
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 022269 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDI 59 (300)
Q Consensus 24 ~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l 59 (300)
+.++...+.|..+|.++|..........-..+..++
T Consensus 28 ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~ 63 (67)
T 3fgh_A 28 EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEM 63 (67)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566788999999999988877766655554443
No 62
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=29.83 E-value=1.1e+02 Score=23.63 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=68.2
Q ss_pred CcEEEEEccCC-cchhhhhhHHHHHHHhCCEEEEeCCCCChHHHHHHHHHHhh-h-cCCCcEEEEeC-ChhhHHHHHhC-
Q 022269 120 FGVVLIISPWN-YPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGE-Y-MDLSSIRVVEG-AVAETSALLDQ- 194 (300)
Q Consensus 120 ~Gvv~~i~p~n-~P~~~~~~~i~~ALaaGn~vvlkp~~~~~~~~~~l~~~l~~-a-~p~~~i~~~~~-~~~~~~~l~~~- 194 (300)
.|.++++..-+ =+-...+..-...++.|..++- +.-| ++.|++ . ++-..++-++. +......++..
T Consensus 27 ~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gT----a~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~~g 97 (178)
T 1vmd_A 27 KKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTT----GALLQEKLGLKVHRLKSGPLGGDQQIGAMIAEG 97 (178)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHH----HHHHHHHHCCCCEECSCGGGTHHHHHHHHHHTT
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHH----HHHHHHHhCceeEEEeecCCCCCchHHHHHHCC
Confidence 37555554443 3444555566677888998876 2333 445555 4 77444432222 22233444555
Q ss_pred CCCeEEEeCC-------hHHHHHHHHHHhccCCceEEeCCCCCcEEEcCCCCHHHHHHHHHHHhcccCCC
Q 022269 195 KWDKICYTGN-------SRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNG 257 (300)
Q Consensus 195 ~v~~i~f~Gs-------~~~~~~i~~~~~~~~~~~~~e~gg~~~~iv~~dad~~~aa~~i~~~~~~~~~G 257 (300)
.|+.|+|+-. ...+..|.+.+..+-.|+..-+ ..|+.++.+.+ ++..
T Consensus 98 eIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail-~~~~ 151 (178)
T 1vmd_A 98 KIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPL-MNDV 151 (178)
T ss_dssp SCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGG-GGSC
T ss_pred CccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 6999999876 2456888988887767755333 56678888877 6554
No 63
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=27.44 E-value=89 Score=20.45 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=28.6
Q ss_pred hCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeCC
Q 022269 146 AGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGA 184 (300)
Q Consensus 146 aGn~vvlkp~~~~~~~~~~l~~~l~~a-~p~~~i~~~~~~ 184 (300)
.||-+|+|-.|.. +..++.++.+. .+++++-.+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999976544 88888988888 788788777764
No 64
>2ikd_A Prophenoloxidase activating proteinase-2; beta-sheet, double helix, hydrolase; NMR {Manduca sexta}
Probab=25.55 E-value=68 Score=20.25 Aligned_cols=44 Identities=18% Similarity=0.316 Sum_probs=27.0
Q ss_pred CCCeecCCCE---EEEcCCchHHHHHHHH---------HHHhcCCCCCCCCCCCCC
Q 022269 256 NGQACISPDH---IITTKDYAPKLVRLLI---------LETSLNPCIYSPPKPFFC 299 (300)
Q Consensus 256 ~Gq~C~~~~~---v~V~~~~~~~f~~~l~---------~~l~~l~~~~~~~~~~~~ 299 (300)
-||.|..++. .-|+-.--+.+++.|. ..|++...|..+..|++|
T Consensus 9 ~~~~C~tp~g~~G~CV~i~~C~~l~~il~~~~~t~~~~~fLr~s~CG~~~~~plVC 64 (66)
T 2ikd_A 9 MGQACTLPNNDKGTCKSLLQCDVASKIISKKPRTAQDEKFLRESACGFDGQTPKVC 64 (66)
T ss_dssp --CEECCTTCSCEEEECTTTCHHHHHHHHHSCCCHHHHHHHHHTCSCCCSSSCCEE
T ss_pred ccccCcCCCCCCEEEeeHHHCHHHHHHHhcCCCCHHHHHHHHHccCCCCCCceeee
Confidence 3899988643 3555554466655543 335556678878888887
No 65
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.54 E-value=1.1e+02 Score=20.04 Aligned_cols=36 Identities=8% Similarity=-0.212 Sum_probs=25.9
Q ss_pred HHHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 022269 24 KELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDI 59 (300)
Q Consensus 24 ~~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l 59 (300)
+.++...+.|..|+.++|..........-+.+..++
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 82 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREM 82 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 335556678999999999888877776666555444
No 66
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.48 E-value=1.1e+02 Score=22.60 Aligned_cols=61 Identities=10% Similarity=0.096 Sum_probs=38.8
Q ss_pred HHHHhhh-cCCCcEEEEeCC------hhhHHHHHhCCCCeEEEeCCh-----HHHHHHHHHHhccCCceEEeC
Q 022269 166 AKLVGEY-MDLSSIRVVEGA------VAETSALLDQKWDKICYTGNS-----RVARIVMAAAAKHLTPVLLEL 226 (300)
Q Consensus 166 ~~~l~~a-~p~~~i~~~~~~------~~~~~~l~~~~v~~i~f~Gs~-----~~~~~i~~~~~~~~~~~~~e~ 226 (300)
.+.+++. +|-..++-++.+ +...+.+....|+.|+++-+. ..+..|++.+..+..|++...
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 3445566 886555544432 334444444469999997655 367788888888777766443
No 67
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=22.63 E-value=1.5e+02 Score=20.28 Aligned_cols=39 Identities=5% Similarity=-0.199 Sum_probs=30.0
Q ss_pred HHHHhhhhcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 022269 25 ELRGTFASGKTKSYGWRVSQLKSLMKMLNEREPDIVDAL 63 (300)
Q Consensus 25 ~A~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~ 63 (300)
.++..-+.|..|+.+++..........-+.+..++..-.
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~ 75 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWV 75 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677899999999999988888777777766665543
No 68
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=21.67 E-value=1.7e+02 Score=18.98 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=25.6
Q ss_pred hCCEEEEeCCCCChHHHHHHHHHHhhh-cCCCcEEEEeC
Q 022269 146 AGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEG 183 (300)
Q Consensus 146 aGn~vvlkp~~~~~~~~~~l~~~l~~a-~p~~~i~~~~~ 183 (300)
++|-+|+|-.|.. +..++.++.+. +|+ ++-.+.|
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAG 54 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAG 54 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEEC
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEec
Confidence 6999999976555 88888888888 554 6666665
No 69
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=20.49 E-value=2.8e+02 Score=21.78 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=26.9
Q ss_pred cCCCcEEEEeC-ChhhHHHHHhCCCCeEEEeCChHHHHHHHHHHhc
Q 022269 173 MDLSSIRVVEG-AVAETSALLDQKWDKICYTGNSRVARIVMAAAAK 217 (300)
Q Consensus 173 ~p~~~i~~~~~-~~~~~~~l~~~~v~~i~f~Gs~~~~~~i~~~~~~ 217 (300)
+.++.+-++ | ..+....++...+..+..+|+......+...+.+
T Consensus 118 ~~~~~ivIv-gdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 118 ISEGDIAIA-GDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp CCTTCEEEE-CSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEE-CCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence 444555554 5 4555566666678888888876655555555443
Done!