BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022270
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8M5|ABIL1_ARATH Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1
Length = 298
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/307 (69%), Positives = 241/307 (78%), Gaps = 16/307 (5%)
Query: 1 MEVELPRLGNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMV 60
ME E+ + N AMT DEVSMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQKQMV
Sbjct: 1 METEISGMDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMV 60
Query: 61 LDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNK 120
LDNLKDY V+ALVNAVDHLGTVA KLTDL + Q SD+STME+R SC++Q+LLTC+TY +K
Sbjct: 61 LDNLKDYTVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDK 120
Query: 121 EGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPRVPTDARQNHFS--SRLQPTGIPASKT 178
EGLRQQQLLA IP HHKHYILPNSVNK+VHFSP TD RQNH+ SRLQP+ PASK+
Sbjct: 121 EGLRQQQLLAVIPLHHKHYILPNSVNKRVHFSPLRRTDTRQNHYQAISRLQPSDAPASKS 180
Query: 179 LSWHLASETKSTSKGTQQALTSSED----RKTSGVFHLLDNEENKLTKSSAVSAQLSSGG 234
LSWHL SETKST KGT SS+D KTSGVFHLL ++EN K +Q+ SG
Sbjct: 181 LSWHLGSETKSTLKGTSTVAPSSKDSKAFSKTSGVFHLLGDDENIANKKPLAGSQV-SGV 239
Query: 235 PASSALVQSFGVARRDAMEGNKTLAPFRSFD-NPRREIVRAPVRSKSVLSAFFVKQKTSK 293
PA+S A +D +E K L RS D NPRREI++APVR+KSVLSAFFVKQKT K
Sbjct: 240 PAAS-------TAHKD-LEVPKLLTAHRSLDNNPRREIIQAPVRTKSVLSAFFVKQKTPK 291
Query: 294 LKAGYVS 300
LKAGYVS
Sbjct: 292 LKAGYVS 298
>sp|Q9AXA6|ABIL1_ORYSJ Probable protein ABIL1 OS=Oryza sativa subsp. japonica
GN=Os01g0622700 PE=2 SV=1
Length = 306
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 202/283 (71%), Gaps = 14/283 (4%)
Query: 14 TFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALV 73
T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVLDNLKDYAVRALV
Sbjct: 32 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALV 91
Query: 74 NAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIP 133
NAVDHLGTVAYKLTDL EQQ S+VST+EL+V+C+NQ++LTCQTY++KEG+RQQQ+
Sbjct: 92 NAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKEGIRQQQMTGTAT 151
Query: 134 RHHKHYILPNSVNKKVHFSPRVPTDARQNHFSSRLQPTGIPASKTLSWHLASETKSTSKG 193
RHHKHYI+P NK++ + TDA SR +P P++KTL WHLASE S + G
Sbjct: 152 RHHKHYIVPTLANKRMQAFSEMQTDA---DIDSRPRP--YPSAKTLFWHLASEKNSKTNG 206
Query: 194 TQQALTSSEDRKTSGVFHLLDNEENKLTKSSAVSAQLSSGGPASSALVQSFGVARRDAME 253
+Q+ E+ K + K +S + L + +S + + G+ +
Sbjct: 207 ARQSEFVLEETKATK-----PASRGKEPSTSPLPKHLQTNLASSDFAMHNVGMKDQ---P 258
Query: 254 GNKTLAPFRSFDNPR-REIVRAPVRSKSVLSAFFVKQKTSKLK 295
G + L+ F SFDNPR R+I +AP+R+KS+L+AFFVK K+ K+K
Sbjct: 259 GVRHLSSFSSFDNPRGRQIQKAPLRTKSMLAAFFVKHKSGKMK 301
>sp|Q6I588|ABIL4_ORYSJ Probable protein ABIL4 OS=Oryza sativa subsp. japonica
GN=Os05g0585400 PE=2 SV=1
Length = 302
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/292 (50%), Positives = 198/292 (67%), Gaps = 19/292 (6%)
Query: 14 TFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALV 73
T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVL+NLKDYAVRA+V
Sbjct: 23 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVV 82
Query: 74 NAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIP 133
NAVDHLGTVAYKLTDL EQQ S+VST+EL+V+ +NQ++LTCQ ++++ GLRQQ++
Sbjct: 83 NAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDRAGLRQQKIGGTTF 142
Query: 134 RHHKHYILPNSVNKKVHFSPRVPTDARQNHFSSRLQPTGIPASKTLSWHLASETKSTSKG 193
+HHKHYILP++ +K+ + R+ TD Q+ +P P++KTLSWHL+SE ++ G
Sbjct: 143 KHHKHYILPSTGHKRTQ-AARLQTDNGQDS-----KPKPYPSAKTLSWHLSSENSISTTG 196
Query: 194 TQQ-----ALTSSEDRKTSGVFHLLDNEENKLTKSSAVSAQLSSGGPASSALVQSFGVAR 248
Q+ T S ++G +LL K +S + L G +++ V
Sbjct: 197 AQKYTFTLGDTISSKPASNGSMYLL----GKDIPASPMHKPLQPNG--NTSFDAKKNVGS 250
Query: 249 RDAMEGNKTLAPFRSFDNPR-REIVRAPVRSKSVLSAFFVKQKTSKLKAGYV 299
+D G ++ F + D PR REI + PV +KS+L+ F+K K++K + V
Sbjct: 251 KD-QPGFMHMSTFNALDKPRGREIQKVPVSTKSMLATLFIKHKSAKTRKASV 301
>sp|Q9M3A3|ABIL2_ARATH Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1
Length = 312
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 95/131 (72%)
Query: 12 AMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRA 71
A +DEVSM++S F LQ+LKNLR QLYSAAEY E SY ++KQ+V++ LKDYAV+A
Sbjct: 7 ASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKA 66
Query: 72 LVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAF 131
LVN VDHLG+V YK+ D ++++ +VS ELRVSC+ Q+L CQ Y + EG QQ L+
Sbjct: 67 LVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHEGRSQQSLVID 126
Query: 132 IPRHHKHYILP 142
P+ HK YILP
Sbjct: 127 TPKFHKRYILP 137
>sp|Q6NMC6|ABIL3_ARATH Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1
Length = 321
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 5 LPRLGNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNL 64
+PR A +DE+SM++S F +L++LKNLR QLYSAAEY E SY + EQKQ+V++ L
Sbjct: 9 MPR---EASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETL 65
Query: 65 KDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLR 124
KDYA++ALVN VDHLG+V YK+ D ++++ +V+ ELRVSC+ Q+L CQ Y + EG
Sbjct: 66 KDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHEGRS 125
Query: 125 QQQLLAFIPRHHKHYILPNSVNKK 148
QQ L+ P+ HK Y LP+ K+
Sbjct: 126 QQSLVIDTPKFHKRYFLPSGEIKR 149
>sp|Q5JKN2|ABIL2_ORYSJ Putative protein ABIL2 OS=Oryza sativa subsp. japonica
GN=Os01g0551800 PE=3 SV=1
Length = 323
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 93/134 (69%)
Query: 9 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYA 68
G + T +EV M+ + F +++LK L+ QLYSAAEY E +Y + KQ V++NLK+Y+
Sbjct: 17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYS 76
Query: 69 VRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQL 128
V+ALVN VDHLG++++K++ L++Q+ +V LRVSC++Q+ Q +KEGL QQ L
Sbjct: 77 VKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKEGLSQQSL 136
Query: 129 LAFIPRHHKHYILP 142
+ P++HK YILP
Sbjct: 137 VITAPKYHKRYILP 150
>sp|Q9FHY1|ABIL4_ARATH Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=2 SV=1
Length = 279
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 82/127 (64%)
Query: 16 DEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNA 75
DE+ M+++ F + L++LKNLR QLYSAAEY E SY +E K+ V++ LK+YA +A+VN
Sbjct: 18 DELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNT 77
Query: 76 VDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRH 135
VDHLG+V+ K L ++ ST LR+S + Q++ C+ Y K G Q LL PRH
Sbjct: 78 VDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGKSGTHQHLLLFQYPRH 137
Query: 136 HKHYILP 142
HK Y P
Sbjct: 138 HKRYFFP 144
>sp|Q5NB83|ABIL3_ORYSJ Probable protein ABIL3 OS=Oryza sativa subsp. japonica
GN=Os01g0236400 PE=2 SV=1
Length = 317
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 16/242 (6%)
Query: 16 DEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNA 75
D S++ F +L++L+NLR QLYSAAEY E Y ++ QK V+ +LKDY V ALV+
Sbjct: 26 DMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVST 85
Query: 76 VDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQQQLLAFIPRH 135
VDHLG V+YK+ +L+++++ +V+ E RVS + Q++ CQ ++EG QQ LL P++
Sbjct: 86 VDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQEGRSQQSLLIRAPKY 145
Query: 136 HKHYILPNS--VNKKVHFSPRVPTDARQNHFSSRL---QPTGIPASKTLSWHLASETKST 190
H+ YILP + V +H P +RQ H S ++ Q P + + A +
Sbjct: 146 HRRYILPGTDIVESAIHPVSEPPRYSRQ-HMSRKMHKSQSISTPVGRQSTMRSARSPSPS 204
Query: 191 SKGTQ---QALTSSEDRKTSGVFHLLDNEENKLTKSSAVSAQLSSGGPASSALVQSFGVA 247
++GT ++L+ S + + + + K T++ S P S+ L +S VA
Sbjct: 205 ARGTHHRSRSLSPSRKARAKSPSPQIISTQTKETRA-------GSPIPNSNPLARSATVA 257
Query: 248 RR 249
RR
Sbjct: 258 RR 259
>sp|Q5JMF2|ABIL5_ORYSJ Probable protein ABIL5 OS=Oryza sativa subsp. japonica
GN=Os01g0760900 PE=2 SV=1
Length = 254
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Query: 19 SMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDH 78
S+ + F AL+ELK+LR QL+ A+ CEK++L +E+K+++L++ K Y A+V +DH
Sbjct: 31 SLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVIDH 90
Query: 79 LGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYS 118
LGTV+ KL L Q+ +++ E +++ + Q+LLTC+ Y+
Sbjct: 91 LGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYA 129
>sp|Q9NYB9|ABI2_HUMAN Abl interactor 2 OS=Homo sapiens GN=ABI2 PE=1 SV=1
Length = 513
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 44 AEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELR 103
A+YCE +Y+ S KQ L+ K Y ++L + + T+A + +L+ Q S + ME
Sbjct: 30 ADYCENNYIQSADKQRALEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMESS 89
Query: 104 VSCMNQKLLTCQTYSNKEGLRQQQLLAF---IPRHHKHYILPNSVNKKVHFSPRVPTD 158
++ ++Q T + K R+ +L R HK I P ++ + V + R P D
Sbjct: 90 INHISQ---TVDIHKEKVARREIGILTTNKNTSRTHK-IIAPANLERPVRYI-RKPID 142
>sp|Q55FT9|ABIA_DICDI Abl interactor homolog OS=Dictyostelium discoideum GN=abiA PE=1
SV=1
Length = 332
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 17 EVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAV 76
++++ + A+ EL + ++ + YC+ Y + + Q + + YA AL+N
Sbjct: 6 DINVYSQTTIPNAMAELMDNHNKMEQISAYCKSLYANGDAAQ-AYEQTQGYAKNALLNVA 64
Query: 77 DHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKL 111
H+ TV +T LL+ QT+++ + + + + Q++
Sbjct: 65 YHIQTVGTHITSLLQLQTNEMEKLNIEIQTLTQRV 99
>sp|P62484|ABI2_MOUSE Abl interactor 2 OS=Mus musculus GN=Abi2 PE=1 SV=1
Length = 446
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 43 AAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMEL 102
A+YCE +Y+ S KQ L+ K Y ++L + + T+A + +L+ Q S + ME
Sbjct: 29 VADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMES 88
Query: 103 RVSCMNQKLLTCQTYSNKEGLRQQQLLAF---IPRHHKHYILPNSVNKKVHFSPRVPTD 158
++ ++Q T + K R+ +L R HK I P ++ + V + R P D
Sbjct: 89 SINHISQ---TVDIHKEKVARREIGILTTNKNTSRTHK-IIAPANLERPVRYI-RKPID 142
>sp|Q8CBW3|ABI1_MOUSE Abl interactor 1 OS=Mus musculus GN=Abi1 PE=1 SV=3
Length = 481
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 40 LYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVST 99
L A+YCE +Y+ + K+ L+ K Y ++L + + +A + LL+ Q S +
Sbjct: 26 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 85
Query: 100 MELRVSCMNQKLLTCQTYSNKEGLRQQQLLAF---IPRHHKHYILPNSVNKKVHFSPRVP 156
ME ++ ++Q T + K R+ +L R HK I P ++ + V + R P
Sbjct: 86 MESSINHISQ---TVDIHKEKVARREIGILTTNKNTSRTHK-IIAPANMERPVRYI-RKP 140
Query: 157 TD 158
D
Sbjct: 141 ID 142
>sp|Q8IZP0|ABI1_HUMAN Abl interactor 1 OS=Homo sapiens GN=ABI1 PE=1 SV=4
Length = 508
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 40 LYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVST 99
L A+YCE +Y+ + K+ L+ K Y ++L + + +A + LL+ Q S +
Sbjct: 26 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 85
Query: 100 MELRVSCMNQKLLTCQTYSNKEGLRQQQLLAF---IPRHHKHYILPNSVNKKVHFSPRVP 156
ME ++ ++Q T + K R+ +L R HK I P ++ + V + R P
Sbjct: 86 MESSINHISQ---TVDIHKEKVARREIGILTTNKNTSRTHK-IIAPANMERPVRYI-RKP 140
Query: 157 TD 158
D
Sbjct: 141 ID 142
>sp|Q9QZM5|ABI1_RAT Abl interactor 1 OS=Rattus norvegicus GN=Abi1 PE=2 SV=3
Length = 476
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 40 LYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVST 99
L A+YCE +Y+ + K+ L+ K Y ++L + + +A + LL+ Q S +
Sbjct: 26 LTRVADYCENNYIQATDKRKALEETKAYTTQSLASVAYQINALANNVLQLLDIQASQLRR 85
Query: 100 MELRVSCMNQKLLTCQTYSNKEGLRQQQLLAF---IPRHHKHYILPNSVNKKVHFSPRVP 156
ME ++ ++Q T + K R+ +L R HK I P ++ + V + R P
Sbjct: 86 MESSINHISQ---TVDIHKEKVARREIGILTTNKNTSRTHK-IIAPANMERPVRYI-RKP 140
Query: 157 TD 158
D
Sbjct: 141 ID 142
>sp|Q9P2A4|ABI3_HUMAN ABI gene family member 3 OS=Homo sapiens GN=ABI3 PE=1 SV=2
Length = 366
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 40 LYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVST 99
L A+YCE +Y+ + K+ L+ + +AL + +G +A +L+ Q + +
Sbjct: 26 LLRVADYCEDNYVQATDKRKALEETMAFTTQALASVAYQVGNLAGHTLRMLDLQGAALRQ 85
Query: 100 MELRVSCMNQ 109
+E RVS + Q
Sbjct: 86 VEARVSTLGQ 95
>sp|Q5ZJM3|NGLY1_CHICK Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Gallus gallus GN=NGLY1 PE=2 SV=1
Length = 651
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 39 QLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVS 98
++YSA++ K +LH + + V D Y + KL+ ++ +V
Sbjct: 336 EVYSASQ---KRWLHCDPCENVCDKPLLYEI-----------GWGKKLSYVIAFSKDEVV 381
Query: 99 TMELRVSCMNQKLLTCQTYSNKEGLRQ---------QQLLAFIPRHHKHYILPNSVNKKV 149
+ R SC +Q++LT +T ++ LR+ QQ L+ + +L ++ +
Sbjct: 382 DVTWRYSCKHQEVLTRRTALSEAKLRETINAINKKKQQSLS---EGRRKELLERTIVELA 438
Query: 150 HF-SPRVPTDARQNHFSSRLQPTGIPASKTLSWHLASETKSTSKGTQQALTSSEDRKTSG 208
F SP+ P + F R S +++W +A + + + SE K S
Sbjct: 439 EFISPKTP---KPGEFGGR-------TSGSMAWRIARGETGSEERKEVIFIPSEKEKASK 488
Query: 209 VFHLLDN-EENKLTKSSAVSAQLSSGGPASSALVQSFGVARR 249
+FHL+ N E+ T+ S + Q++ G + + ++ +AR+
Sbjct: 489 LFHLMYNVVEDSYTRISNNNEQITGWG---TGIWKAESIARK 527
>sp|Q8BYZ1|ABI3_MOUSE ABI gene family member 3 OS=Mus musculus GN=Abi3 PE=2 SV=3
Length = 367
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%)
Query: 40 LYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVST 99
L A YCE +YL + K+ L+ + +AL + +G +A +L+ Q + +
Sbjct: 29 LLRVANYCEDNYLQATDKRKALEETMAFTTQALASVAYQVGNLAGHTLRMLDLQGAALRQ 88
Query: 100 MELRVSCMNQ 109
+E ++S + Q
Sbjct: 89 VEAKMSTLGQ 98
>sp|P15533|TR30A_MOUSE Tripartite motif-containing protein 30A OS=Mus musculus GN=Trim30a
PE=1 SV=2
Length = 496
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 15 FDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVL 61
+ EV + RS +++ L + K +PQL+S E K LHS+ KQ VL
Sbjct: 351 YWEVDISRSDAWLLGLNDGKCAQPQLHSKEEMGIKKNLHSQIKQNVL 397
>sp|F1NTD6|ASCC3_CHICK Activating signal cointegrator 1 complex subunit 3 OS=Gallus gallus
GN=ascc3 PE=3 SV=2
Length = 2211
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 73 VNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQ-TYSNKEGLRQQQLLAF 131
+ +D +G +A+K L + S V N+ +L C T + K + +L
Sbjct: 469 IKDLDEIGQLAFKGMKRLNRIQSIVFETAYNT---NENMLICAPTGAGKTNIAMLTVLHE 525
Query: 132 IPRHHKHYILPNSVNKKVHFSPRVPTDARQ-NHFSSRLQPTGI 173
I +H +H ++ K V+ +P A N+FS RL+P GI
Sbjct: 526 IRQHVQHGVIKKDEFKIVYVAPMKALAAEMTNYFSKRLEPLGI 568
>sp|Q65R92|NDPA_MANSM Nucleoid-associated protein MS1911 OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=MS1911 PE=3 SV=1
Length = 355
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 10 NRAMTF--DEVSMERSKSFVKALQELKNLRPQ------LYSAAEYCEKSYLHSEQKQMVL 61
NR +TF V + F+ L + L PQ L + ++YC+K L +EQ Q V
Sbjct: 184 NRYLTFIKGRVGRKIGDFFMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQAVK 243
Query: 62 DNLKDYAVRALVNAVDHLGTVAYKLTDLLE 91
+ DY + +NA D + +LT+L E
Sbjct: 244 KQVFDYC-KGQINAGDEI-----ELTELSE 267
>sp|Q7ZYM8|MSD3_XENLA Myb/SANT-like DNA-binding domain-containing protein 3 OS=Xenopus
laevis GN=msantd3 PE=2 SV=1
Length = 365
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 206 TSGVFHLLDNEENKLT-----KSSAVSAQLSSGGPASSALVQSFGVARRDAMEGNKTLAP 260
++G LL +E+ K+ K +Q G P+SS +SF V RD E ++A
Sbjct: 189 SNGDLELLIDEQGKIQAEPIRKVPVTDSQCIQGSPSSSLKTESFVVPERDVYEDQNSIAN 248
Query: 261 FRSFDNPRREIVRAPVRSKSVLSA 284
S ++ + P+ S LSA
Sbjct: 249 MHSSES---SVHSTPIFPSSKLSA 269
>sp|Q8MJS1|I12R2_PIG Interleukin-12 receptor subunit beta-2 OS=Sus scrofa GN=IL12RB2
PE=2 SV=1
Length = 861
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 71 ALVNAVDHLGTVA-----YKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQTYSNKEGLRQ 125
A V A++ LGT + + D++ + ++R+ C+N + TC EGL
Sbjct: 198 AQVTAINSLGTASSLPSTFTFLDVVR----PLPPWDIRIKCVNASVSTCTLQWRDEGLVL 253
Query: 126 QQLLAFIPRHHKHYILPNSVNKK 148
L + P + + + + N+ N K
Sbjct: 254 LNRLRYRPVYSRSWNMVNATNAK 276
>sp|Q8CQ62|PTAS_STAES Phosphate acetyltransferase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=pta PE=3 SV=1
Length = 329
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 162 NHFSSRLQPTGIPASKTLSWHLASETKSTSKGTQQAL-TSSEDRKTSGVFHLLDNEENKL 220
N+F + L TG ++ L A T T + Q + T +TSG+F ++ +E +
Sbjct: 106 NYFGTMLVYTG--KAEGLVSGAAHSTGDTVRPALQIIKTKPGVSRTSGIFFMIKGDEQYI 163
Query: 221 TKSSAVSAQLSSGGPASSAL-----VQSFGVARRDAM 252
A++ +L + G A A+ QSFG+ + AM
Sbjct: 164 FGDCAINPELDAQGLAEIAVESAKSAQSFGMDPKVAM 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.126 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,673,105
Number of Sequences: 539616
Number of extensions: 3608362
Number of successful extensions: 11574
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 11505
Number of HSP's gapped (non-prelim): 103
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)