Query 022271
Match_columns 300
No_of_seqs 264 out of 1778
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 16:42:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022271.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022271hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bo9_A Putative nitroalkan dio 100.0 1.1E-46 3.6E-51 350.3 26.7 269 3-295 19-319 (326)
2 2gjl_A Hypothetical protein PA 100.0 5.7E-46 2E-50 345.6 25.1 275 3-297 8-321 (328)
3 2z6i_A Trans-2-enoyl-ACP reduc 100.0 2.6E-45 8.9E-50 341.8 26.2 275 3-297 5-314 (332)
4 3bw2_A 2-nitropropane dioxygen 100.0 1.2E-43 4.2E-48 335.0 29.4 267 3-296 5-351 (369)
5 2uva_G Fatty acid synthase bet 100.0 1.7E-38 5.9E-43 347.5 20.9 270 3-289 576-924 (2060)
6 2uv8_G Fatty acid synthase sub 100.0 3.2E-37 1.1E-41 335.7 16.9 211 3-219 583-869 (2051)
7 3zen_D Fatty acid synthase; tr 100.0 1.3E-32 4.3E-37 308.5 12.2 207 3-213 421-704 (3089)
8 3ffs_A Inosine-5-monophosphate 100.0 1.9E-28 6.4E-33 231.9 18.4 172 3-177 35-289 (400)
9 4fo4_A Inosine 5'-monophosphat 99.9 5.5E-25 1.9E-29 206.3 19.7 170 3-178 39-255 (366)
10 3khj_A Inosine-5-monophosphate 99.9 5.1E-24 1.8E-28 199.8 17.5 169 3-176 38-249 (361)
11 1eep_A Inosine 5'-monophosphat 99.9 1.3E-22 4.5E-27 193.3 18.9 239 4-294 36-368 (404)
12 2c6q_A GMP reductase 2; TIM ba 99.9 1.5E-21 5E-26 182.6 16.3 170 5-178 52-267 (351)
13 3r2g_A Inosine 5'-monophosphat 99.8 8.8E-21 3E-25 177.0 14.6 160 9-176 41-241 (361)
14 1ypf_A GMP reductase; GUAC, pu 99.8 2.3E-20 7.8E-25 173.7 14.2 164 8-179 44-255 (336)
15 4fxs_A Inosine-5'-monophosphat 99.7 3.6E-17 1.2E-21 159.4 17.7 173 3-178 36-378 (496)
16 3usb_A Inosine-5'-monophosphat 99.7 1.7E-16 5.7E-21 155.2 19.0 170 3-175 60-400 (511)
17 2qr6_A IMP dehydrogenase/GMP r 99.7 2.5E-16 8.4E-21 149.4 19.5 167 8-176 65-319 (393)
18 2cu0_A Inosine-5'-monophosphat 99.7 8.1E-17 2.8E-21 156.7 15.4 56 3-61 40-95 (486)
19 4avf_A Inosine-5'-monophosphat 99.7 3E-16 1E-20 152.7 19.0 172 3-177 35-375 (490)
20 1vrd_A Inosine-5'-monophosphat 99.7 9.5E-16 3.3E-20 149.4 14.5 107 77-183 239-389 (494)
21 1zfj_A Inosine monophosphate d 99.6 1.8E-15 6.2E-20 147.3 15.9 56 3-61 37-92 (491)
22 4af0_A Inosine-5'-monophosphat 99.6 5E-15 1.7E-19 142.8 16.8 57 119-175 369-425 (556)
23 3b0p_A TRNA-dihydrouridine syn 99.6 9.9E-15 3.4E-19 136.3 14.1 158 9-171 2-233 (350)
24 1jcn_A Inosine monophosphate d 99.6 6.1E-14 2.1E-18 137.3 19.1 101 77-180 257-404 (514)
25 1ofd_A Ferredoxin-dependent gl 99.6 1.1E-14 3.9E-19 154.2 12.8 167 6-173 863-1138(1520)
26 1ea0_A Glutamate synthase [NAD 99.5 1.6E-14 5.4E-19 152.9 12.1 166 7-173 847-1103(1479)
27 3q58_A N-acetylmannosamine-6-p 99.5 1.7E-13 5.9E-18 120.6 13.9 134 24-169 38-216 (229)
28 1me8_A Inosine-5'-monophosphat 99.5 3.3E-13 1.1E-17 131.8 16.1 61 118-178 330-396 (503)
29 3igs_A N-acetylmannosamine-6-p 99.5 3.2E-13 1.1E-17 119.1 14.1 145 24-182 38-227 (232)
30 1vhn_A Putative flavin oxidore 99.5 3E-13 1E-17 124.6 12.1 155 8-171 2-221 (318)
31 1ep3_A Dihydroorotate dehydrog 99.5 6.8E-14 2.3E-18 128.0 7.7 153 12-171 49-278 (311)
32 2nli_A Lactate oxidase; flavoe 99.5 9E-13 3.1E-17 123.8 15.4 159 5-170 73-320 (368)
33 3sr7_A Isopentenyl-diphosphate 99.4 7.6E-13 2.6E-17 123.8 11.6 56 119-176 265-320 (365)
34 2nzl_A Hydroxyacid oxidase 1; 99.4 1.8E-12 6.2E-17 122.6 14.3 54 118-172 292-345 (392)
35 3sgz_A Hydroxyacid oxidase 2; 99.4 5.4E-12 1.9E-16 117.2 13.7 52 118-170 257-308 (352)
36 3vkj_A Isopentenyl-diphosphate 99.4 1.5E-11 5.2E-16 115.3 15.9 50 119-170 254-303 (368)
37 1kbi_A Cytochrome B2, L-LCR; f 99.3 1.3E-11 4.6E-16 120.4 15.5 62 119-180 384-449 (511)
38 1p0k_A Isopentenyl-diphosphate 99.3 1.3E-11 4.4E-16 115.1 14.7 165 5-173 48-290 (349)
39 1gox_A (S)-2-hydroxy-acid oxid 99.3 4.6E-11 1.6E-15 112.2 14.7 51 118-169 265-315 (370)
40 1y0e_A Putative N-acetylmannos 99.3 3.8E-11 1.3E-15 104.6 12.9 142 15-168 16-209 (223)
41 1p4c_A L(+)-mandelate dehydrog 99.2 4.4E-10 1.5E-14 105.9 15.5 86 79-169 216-313 (380)
42 1vcf_A Isopentenyl-diphosphate 99.2 1.6E-10 5.4E-15 107.0 11.4 116 52-170 171-292 (332)
43 1jub_A Dihydroorotate dehydrog 99.1 9.8E-10 3.3E-14 100.6 15.2 157 9-168 11-276 (311)
44 1gte_A Dihydropyrimidine dehyd 99.1 9.4E-10 3.2E-14 115.8 15.5 160 5-168 536-821 (1025)
45 2e6f_A Dihydroorotate dehydrog 99.1 6.9E-10 2.4E-14 101.7 12.5 156 9-168 13-278 (314)
46 1yxy_A Putative N-acetylmannos 99.0 8.2E-09 2.8E-13 90.5 16.4 133 23-168 37-220 (234)
47 3vnd_A TSA, tryptophan synthas 99.0 4.1E-09 1.4E-13 94.6 12.8 122 46-171 77-243 (267)
48 3nav_A Tryptophan synthase alp 99.0 3.8E-09 1.3E-13 94.9 12.0 121 47-171 80-245 (271)
49 1wv2_A Thiazole moeity, thiazo 98.9 1.4E-08 4.7E-13 89.7 13.9 132 46-184 84-238 (265)
50 1f76_A Dihydroorotate dehydrog 98.9 4.7E-09 1.6E-13 97.1 11.2 121 47-168 186-323 (336)
51 3i65_A Dihydroorotate dehydrog 98.9 1.8E-09 6.3E-14 102.2 7.5 123 46-169 231-380 (415)
52 1rd5_A Tryptophan synthase alp 98.9 6E-09 2.1E-13 93.1 9.6 122 47-172 78-239 (262)
53 3f4w_A Putative hexulose 6 pho 98.9 2.7E-08 9.2E-13 85.6 12.5 115 53-170 42-194 (211)
54 1ujp_A Tryptophan synthase alp 98.8 1.4E-08 4.8E-13 91.3 10.7 120 46-171 74-237 (271)
55 3zwt_A Dihydroorotate dehydrog 98.8 1.1E-08 3.9E-13 95.7 10.4 121 47-168 197-332 (367)
56 1tv5_A Dhodehase, dihydroorota 98.8 5.5E-09 1.9E-13 100.0 8.0 106 62-168 295-407 (443)
57 3oix_A Putative dihydroorotate 98.8 6.2E-09 2.1E-13 96.7 7.0 157 9-168 127-309 (345)
58 1wa3_A 2-keto-3-deoxy-6-phosph 98.8 8.6E-09 2.9E-13 88.4 7.4 154 1-168 1-183 (205)
59 1yad_A Regulatory protein TENI 98.8 2.3E-08 7.9E-13 86.9 9.6 138 35-183 41-213 (221)
60 1qop_A Tryptophan synthase alp 98.8 7E-08 2.4E-12 86.6 13.0 118 50-171 80-242 (268)
61 4ef8_A Dihydroorotate dehydrog 98.8 1.3E-08 4.6E-13 94.7 8.4 121 47-169 177-312 (354)
62 3tjx_A Dihydroorotate dehydrog 98.8 5E-08 1.7E-12 90.9 12.1 45 122-168 267-311 (354)
63 2zbt_A Pyridoxal biosynthesis 98.8 1.2E-08 4E-13 92.8 7.6 142 21-169 27-244 (297)
64 2ekc_A AQ_1548, tryptophan syn 98.7 1.4E-07 4.7E-12 84.4 12.6 118 49-171 79-242 (262)
65 1geq_A Tryptophan synthase alp 98.7 1.1E-07 3.7E-12 83.9 11.7 121 47-171 64-228 (248)
66 3tha_A Tryptophan synthase alp 98.7 3.2E-08 1.1E-12 87.8 8.0 130 46-182 73-246 (252)
67 2htm_A Thiazole biosynthesis p 98.7 1.2E-07 4E-12 83.9 11.3 100 79-184 116-229 (268)
68 2nv1_A Pyridoxal biosynthesis 98.7 7.7E-08 2.6E-12 87.8 10.6 178 21-210 27-284 (305)
69 3qja_A IGPS, indole-3-glycerol 98.6 9.1E-07 3.1E-11 79.5 16.1 140 25-170 75-249 (272)
70 1xi3_A Thiamine phosphate pyro 98.6 1.2E-07 4.1E-12 81.4 9.9 137 24-170 28-197 (215)
71 2yw3_A 4-hydroxy-2-oxoglutarat 98.6 3.8E-07 1.3E-11 78.7 13.0 134 23-168 26-184 (207)
72 3kts_A Glycerol uptake operon 98.6 7.3E-07 2.5E-11 75.7 13.9 154 1-170 1-186 (192)
73 4adt_A Pyridoxine biosynthetic 98.6 5.6E-08 1.9E-12 88.3 7.3 157 22-187 28-263 (297)
74 1xm3_A Thiazole biosynthesis p 98.6 1.2E-07 4.2E-12 84.8 9.3 156 9-183 64-228 (264)
75 3tsm_A IGPS, indole-3-glycerol 98.6 8.6E-07 2.9E-11 79.5 14.5 141 24-171 81-257 (272)
76 1tqj_A Ribulose-phosphate 3-ep 98.6 2.9E-07 1E-11 80.7 10.7 116 53-170 52-208 (230)
77 1vzw_A Phosphoribosyl isomeras 98.6 3.1E-07 1.1E-11 80.7 10.3 139 24-170 34-229 (244)
78 2y88_A Phosphoribosyl isomeras 98.5 3.7E-07 1.3E-11 80.2 9.7 141 24-171 33-233 (244)
79 1rpx_A Protein (ribulose-phosp 98.4 2.4E-06 8.1E-11 74.5 12.9 116 53-170 58-214 (230)
80 3gr7_A NADPH dehydrogenase; fl 98.4 1.8E-06 6E-11 80.0 12.6 110 50-171 196-315 (340)
81 2v82_A 2-dehydro-3-deoxy-6-pho 98.4 1.9E-06 6.6E-11 74.0 12.1 136 26-169 23-182 (212)
82 1thf_D HISF protein; thermophI 98.4 4.5E-06 1.6E-10 73.5 14.7 142 24-170 32-231 (253)
83 3o07_A Pyridoxine biosynthesis 98.4 8.4E-07 2.9E-11 78.9 9.5 156 22-187 18-254 (291)
84 1h5y_A HISF; histidine biosynt 98.4 9.2E-06 3.1E-10 70.9 16.3 153 24-183 35-245 (253)
85 2qjg_A Putative aldolase MJ040 98.4 9.4E-07 3.2E-11 79.0 9.8 150 8-170 31-244 (273)
86 1ka9_F Imidazole glycerol phos 98.4 6.9E-06 2.4E-10 72.3 14.3 142 24-170 33-232 (252)
87 3ovp_A Ribulose-phosphate 3-ep 98.4 3.4E-06 1.2E-10 73.8 11.8 112 54-169 53-203 (228)
88 1h1y_A D-ribulose-5-phosphate 98.3 3.4E-06 1.2E-10 73.6 11.4 114 53-170 54-208 (228)
89 1z41_A YQJM, probable NADH-dep 98.3 4.9E-06 1.7E-10 76.9 13.0 110 49-170 195-314 (338)
90 2fli_A Ribulose-phosphate 3-ep 98.3 2.7E-06 9.1E-11 73.4 10.5 145 23-169 17-204 (220)
91 1viz_A PCRB protein homolog; s 98.3 2E-05 6.7E-10 69.4 16.0 165 1-171 1-218 (240)
92 1mzh_A Deoxyribose-phosphate a 98.3 4.4E-06 1.5E-10 72.9 11.5 100 47-164 100-205 (225)
93 2w6r_A Imidazole glycerol phos 98.3 2.9E-06 9.9E-11 75.4 10.4 48 120-170 189-236 (266)
94 3inp_A D-ribulose-phosphate 3- 98.3 6.8E-06 2.3E-10 72.6 12.1 115 53-169 75-229 (246)
95 1qo2_A Molecule: N-((5-phospho 98.3 3.5E-06 1.2E-10 73.9 9.6 140 9-170 72-230 (241)
96 3hgj_A Chromate reductase; TIM 98.2 1.5E-05 5E-10 74.1 13.6 111 50-171 204-326 (349)
97 3ctl_A D-allulose-6-phosphate 98.2 1.2E-05 4E-10 70.5 12.0 115 53-169 47-202 (231)
98 3o63_A Probable thiamine-phosp 98.2 4.1E-06 1.4E-10 73.9 9.1 49 120-170 178-226 (243)
99 2yzr_A Pyridoxal biosynthesis 98.2 2.9E-05 9.8E-10 70.9 14.7 66 119-187 228-296 (330)
100 4e38_A Keto-hydroxyglutarate-a 98.2 1.6E-05 5.6E-10 69.5 12.4 133 25-168 49-207 (232)
101 1vkf_A Glycerol uptake operon 98.2 2.1E-05 7.1E-10 66.3 12.5 114 49-170 43-184 (188)
102 3vzx_A Heptaprenylglyceryl pho 98.2 1.8E-05 6.3E-10 68.9 12.6 154 10-170 8-215 (228)
103 2f6u_A GGGPS, (S)-3-O-geranylg 98.2 2.1E-05 7.3E-10 68.9 12.8 151 14-170 14-225 (234)
104 3w01_A Heptaprenylglyceryl pho 98.1 7.8E-05 2.7E-09 65.2 15.1 154 9-169 12-220 (235)
105 4ab4_A Xenobiotic reductase B; 98.1 2.3E-05 7.7E-10 73.1 11.7 98 50-171 205-316 (362)
106 3l5l_A Xenobiotic reductase A; 98.1 1.2E-05 4.2E-10 75.0 9.8 110 50-170 210-332 (363)
107 3gka_A N-ethylmaleimide reduct 98.1 2.2E-05 7.4E-10 73.3 11.2 98 50-171 213-324 (361)
108 3vk5_A MOEO5; TIM barrel, tran 98.1 0.0001 3.4E-09 66.0 14.9 141 27-169 58-262 (286)
109 3kru_A NADH:flavin oxidoreduct 98.1 2.8E-05 9.4E-10 72.1 11.5 110 49-171 194-315 (343)
110 2gou_A Oxidoreductase, FMN-bin 98.0 2.8E-05 9.5E-10 72.6 11.6 103 50-170 213-329 (365)
111 3ceu_A Thiamine phosphate pyro 98.0 1.5E-05 5.2E-10 68.6 9.0 146 25-183 16-192 (210)
112 2tps_A Protein (thiamin phosph 98.0 9.6E-06 3.3E-10 70.1 7.6 46 120-169 160-206 (227)
113 3jr2_A Hexulose-6-phosphate sy 98.0 2.4E-05 8.3E-10 67.6 10.0 115 53-169 48-200 (218)
114 2r14_A Morphinone reductase; H 98.0 4.1E-05 1.4E-09 71.8 12.1 104 50-170 218-335 (377)
115 1vc4_A Indole-3-glycerol phosp 98.0 2.3E-05 7.9E-10 69.6 9.5 140 24-170 67-243 (254)
116 3tdn_A FLR symmetric alpha-bet 98.0 2.6E-06 9E-11 75.0 3.1 48 120-170 189-236 (247)
117 3tdn_A FLR symmetric alpha-bet 98.0 9.1E-06 3.1E-10 71.5 6.1 50 119-171 67-116 (247)
118 1i4n_A Indole-3-glycerol phosp 98.0 7E-05 2.4E-09 66.3 11.7 140 24-171 63-238 (251)
119 1icp_A OPR1, 12-oxophytodienoa 97.9 3.6E-05 1.2E-09 72.1 10.0 105 50-170 219-337 (376)
120 1vyr_A Pentaerythritol tetrani 97.9 5.6E-05 1.9E-09 70.5 10.6 103 50-170 213-330 (364)
121 3lab_A Putative KDPG (2-keto-3 97.9 0.00015 5.2E-09 62.6 12.0 132 25-167 28-191 (217)
122 1pii_A N-(5'phosphoribosyl)ant 97.8 0.00012 4.1E-09 70.0 11.6 124 53-182 98-253 (452)
123 2hsa_B 12-oxophytodienoate red 97.8 0.00012 3.9E-09 69.3 11.2 113 49-170 222-355 (402)
124 3ajx_A 3-hexulose-6-phosphate 97.8 0.00027 9.3E-09 60.1 12.6 116 53-170 42-193 (207)
125 4a29_A Engineered retro-aldol 97.7 0.0003 1E-08 62.0 12.1 116 53-171 94-241 (258)
126 3aty_A Tcoye, prostaglandin F2 97.7 0.00014 4.8E-09 68.2 10.7 101 50-170 229-343 (379)
127 1jvn_A Glutamine, bifunctional 97.7 5.9E-05 2E-09 74.2 7.8 80 100-184 455-545 (555)
128 1tqx_A D-ribulose-5-phosphate 97.7 0.00015 5.1E-09 63.2 9.2 111 53-169 53-207 (227)
129 3cu2_A Ribulose-5-phosphate 3- 97.6 0.00019 6.6E-09 62.9 9.4 113 53-169 61-223 (237)
130 3l5a_A NADH/flavin oxidoreduct 97.6 0.00028 9.6E-09 67.0 10.5 124 50-187 223-364 (419)
131 1o94_A Tmadh, trimethylamine d 97.6 0.00011 3.8E-09 74.5 7.5 113 50-171 201-329 (729)
132 1ps9_A 2,4-dienoyl-COA reducta 97.6 0.00027 9.3E-09 70.8 10.3 113 49-170 192-317 (671)
133 1ka9_F Imidazole glycerol phos 97.5 5.7E-05 1.9E-09 66.3 4.5 78 77-170 34-111 (252)
134 1v5x_A PRA isomerase, phosphor 97.5 0.004 1.4E-07 53.2 15.9 139 21-169 7-180 (203)
135 2h6r_A Triosephosphate isomera 97.5 0.00038 1.3E-08 60.2 9.3 116 55-170 45-206 (219)
136 1qo2_A Molecule: N-((5-phospho 97.5 0.00011 3.8E-09 64.2 6.0 77 77-170 33-109 (241)
137 1vhc_A Putative KHG/KDPG aldol 97.5 0.0012 4.2E-08 57.2 12.4 134 25-170 32-192 (224)
138 2p10_A MLL9387 protein; putati 97.4 0.0011 3.9E-08 59.0 11.2 148 10-170 94-266 (286)
139 3k30_A Histamine dehydrogenase 97.4 0.00016 5.4E-09 72.8 6.4 148 50-214 209-374 (690)
140 1wbh_A KHG/KDPG aldolase; lyas 97.4 0.0017 5.7E-08 56.0 12.0 134 25-170 31-191 (214)
141 1thf_D HISF protein; thermophI 97.4 0.0002 6.8E-09 62.8 6.2 48 120-170 63-110 (253)
142 2agk_A 1-(5-phosphoribosyl)-5- 97.4 0.0002 6.8E-09 63.7 6.2 48 119-166 189-239 (260)
143 1nsj_A PRAI, phosphoribosyl an 97.4 0.0044 1.5E-07 53.0 13.9 139 21-169 8-186 (205)
144 2w6r_A Imidazole glycerol phos 97.3 0.00025 8.7E-09 62.7 6.0 89 77-184 33-122 (266)
145 2y88_A Phosphoribosyl isomeras 97.3 0.00048 1.6E-08 60.0 6.9 47 121-170 64-110 (244)
146 3oa3_A Aldolase; structural ge 97.2 0.002 6.9E-08 57.8 10.8 99 47-160 156-260 (288)
147 1mxs_A KDPG aldolase; 2-keto-3 97.2 0.0033 1.1E-07 54.6 11.7 134 25-170 41-201 (225)
148 4gj1_A 1-(5-phosphoribosyl)-5- 97.2 0.0028 9.6E-08 55.6 11.2 47 119-168 183-229 (243)
149 2qr6_A IMP dehydrogenase/GMP r 97.2 0.00084 2.9E-08 63.0 8.3 82 79-164 147-240 (393)
150 1vzw_A Phosphoribosyl isomeras 97.2 0.00062 2.1E-08 59.4 6.9 46 121-169 65-110 (244)
151 1w8s_A FBP aldolase, fructose- 97.1 0.0032 1.1E-07 55.9 10.9 101 46-170 118-238 (263)
152 1ub3_A Aldolase protein; schif 97.1 0.0027 9.2E-08 55.0 10.0 101 47-165 101-209 (220)
153 1q6o_A Humps, 3-keto-L-gulonat 97.1 0.0045 1.5E-07 53.0 11.3 114 54-169 46-197 (216)
154 2czd_A Orotidine 5'-phosphate 97.0 0.0024 8.2E-08 54.5 9.0 111 55-169 43-191 (208)
155 3cwo_X Beta/alpha-barrel prote 97.0 0.0012 4E-08 56.3 6.8 61 120-185 163-223 (237)
156 4gj1_A 1-(5-phosphoribosyl)-5- 97.0 0.0014 4.9E-08 57.5 7.1 69 99-170 33-111 (243)
157 3ngj_A Deoxyribose-phosphate a 96.9 0.0041 1.4E-07 54.4 9.5 96 47-160 125-226 (239)
158 3nl6_A Thiamine biosynthetic b 96.9 0.008 2.7E-07 58.8 12.6 50 120-170 156-216 (540)
159 1h5y_A HISF; histidine biosynt 96.9 0.0009 3.1E-08 58.0 5.4 77 77-169 36-112 (253)
160 1vcv_A Probable deoxyribose-ph 96.8 0.0093 3.2E-07 51.7 10.3 107 47-158 96-211 (226)
161 3r12_A Deoxyribose-phosphate a 96.7 0.012 4.3E-07 51.9 11.1 95 47-159 141-241 (260)
162 4aaj_A N-(5'-phosphoribosyl)an 96.7 0.058 2E-06 46.7 15.0 133 21-166 27-205 (228)
163 3exr_A RMPD (hexulose-6-phosph 96.6 0.0097 3.3E-07 51.4 9.6 114 54-169 48-202 (221)
164 3tjl_A NADPH dehydrogenase; OL 96.6 0.0051 1.7E-07 58.0 8.3 108 50-170 220-353 (407)
165 3glc_A Aldolase LSRF; TIM barr 96.4 0.016 5.3E-07 52.3 9.8 47 121-170 213-264 (295)
166 1zfj_A Inosine monophosphate d 96.4 0.0087 3E-07 57.6 8.4 74 119-195 261-342 (491)
167 3ndo_A Deoxyribose-phosphate a 96.3 0.022 7.6E-07 49.5 10.0 96 47-159 110-215 (231)
168 1vc4_A Indole-3-glycerol phosp 96.3 0.0084 2.9E-07 52.9 7.3 67 99-168 67-140 (254)
169 1pii_A N-(5'phosphoribosyl)ant 96.1 0.12 4.3E-06 49.1 14.6 134 21-167 261-431 (452)
170 1vcf_A Isopentenyl-diphosphate 96.0 0.01 3.5E-07 54.2 6.8 141 5-163 51-212 (332)
171 3tsm_A IGPS, indole-3-glycerol 95.8 0.023 7.8E-07 50.7 7.5 66 99-167 81-153 (272)
172 1to3_A Putative aldolase YIHT; 95.7 0.072 2.5E-06 48.2 10.6 35 134-169 221-260 (304)
173 1qap_A Quinolinic acid phospho 95.7 0.068 2.3E-06 48.2 10.3 87 51-165 195-282 (296)
174 3qja_A IGPS, indole-3-glycerol 95.6 0.024 8.3E-07 50.5 7.2 67 99-168 74-147 (272)
175 4a3u_A NCR, NADH\:flavin oxido 95.5 0.034 1.2E-06 51.4 8.0 106 50-171 204-323 (358)
176 2agk_A 1-(5-phosphoribosyl)-5- 95.3 0.012 4.2E-07 52.0 4.0 67 98-169 39-109 (260)
177 2b7n_A Probable nicotinate-nuc 95.2 0.053 1.8E-06 48.3 7.9 91 52-167 169-261 (273)
178 1jvn_A Glutamine, bifunctional 95.0 0.017 5.7E-07 56.7 4.5 67 99-168 282-372 (555)
179 1x1o_A Nicotinate-nucleotide p 94.9 0.23 8E-06 44.4 11.3 89 52-168 183-273 (286)
180 1n7k_A Deoxyribose-phosphate a 94.7 0.15 5.1E-06 44.3 9.2 94 50-163 117-223 (234)
181 1eix_A Orotidine 5'-monophosph 94.7 0.21 7E-06 43.5 10.1 112 54-169 57-227 (245)
182 2jbm_A Nicotinate-nucleotide p 94.3 0.052 1.8E-06 49.0 5.6 90 52-166 184-275 (299)
183 4e38_A Keto-hydroxyglutarate-a 94.3 0.66 2.3E-05 40.1 12.3 156 7-185 13-171 (232)
184 3c2e_A Nicotinate-nucleotide p 94.1 0.089 3E-06 47.3 6.6 89 51-166 185-280 (294)
185 2a4a_A Deoxyribose-phosphate a 94.1 0.086 2.9E-06 47.1 6.4 95 50-158 142-249 (281)
186 4ef8_A Dihydroorotate dehydrog 94.0 0.17 6E-06 46.6 8.5 146 5-163 40-228 (354)
187 3khj_A Inosine-5-monophosphate 93.6 0.18 6.2E-06 46.6 7.9 66 94-163 101-173 (361)
188 3r2g_A Inosine 5'-monophosphat 93.5 0.27 9.2E-06 45.5 8.8 84 76-163 77-169 (361)
189 1w0m_A TIM, triosephosphate is 93.5 0.61 2.1E-05 40.2 10.5 37 134-170 173-209 (226)
190 1hg3_A Triosephosphate isomera 92.9 0.65 2.2E-05 40.0 9.8 37 134-170 176-212 (225)
191 1p1x_A Deoxyribose-phosphate a 92.9 0.11 3.9E-06 45.8 5.0 95 47-158 115-222 (260)
192 3fs2_A 2-dehydro-3-deoxyphosph 92.4 2.8 9.6E-05 37.5 13.5 46 119-168 203-265 (298)
193 3tqv_A Nicotinate-nucleotide p 92.3 1.2 4E-05 39.8 10.9 87 51-165 185-272 (287)
194 2yyu_A Orotidine 5'-phosphate 92.2 0.76 2.6E-05 39.8 9.5 35 135-169 177-221 (246)
195 4eiv_A Deoxyribose-phosphate a 91.9 0.35 1.2E-05 43.2 6.9 116 48-167 134-262 (297)
196 3paj_A Nicotinate-nucleotide p 91.9 1.4 4.8E-05 39.9 11.0 87 51-165 218-305 (320)
197 1vhc_A Putative KHG/KDPG aldol 91.6 5.9 0.0002 33.8 14.5 148 22-186 5-155 (224)
198 3lab_A Putative KDPG (2-keto-3 91.6 0.43 1.5E-05 40.9 6.9 63 78-162 29-91 (217)
199 1f76_A Dihydroorotate dehydrog 91.5 0.53 1.8E-05 42.7 8.0 150 6-166 49-248 (336)
200 1qpo_A Quinolinate acid phosph 91.4 1.3 4.5E-05 39.4 10.3 92 51-167 181-273 (284)
201 3oix_A Putative dihydroorotate 91.2 0.69 2.3E-05 42.4 8.4 144 5-161 41-222 (345)
202 3gnn_A Nicotinate-nucleotide p 91.1 0.72 2.5E-05 41.4 8.2 87 51-165 196-283 (298)
203 2yxb_A Coenzyme B12-dependent 91.1 0.62 2.1E-05 37.8 7.2 80 82-162 41-127 (161)
204 1o4u_A Type II quinolic acid p 91.1 0.42 1.4E-05 42.7 6.6 92 51-167 179-272 (285)
205 4fo4_A Inosine 5'-monophosphat 91.0 0.59 2E-05 43.2 7.8 61 100-163 110-177 (366)
206 3nvt_A 3-deoxy-D-arabino-heptu 90.8 2.4 8.4E-05 39.3 11.8 151 11-167 143-350 (385)
207 4gbu_A NADPH dehydrogenase 1; 90.7 0.15 5.3E-06 47.7 3.6 50 126-184 313-363 (400)
208 3l0g_A Nicotinate-nucleotide p 90.4 1.3 4.5E-05 39.7 9.2 88 51-166 194-282 (300)
209 2xij_A Methylmalonyl-COA mutas 90.3 2.2 7.4E-05 43.1 11.7 115 49-164 588-716 (762)
210 1ccw_A Protein (glutamate muta 89.9 0.35 1.2E-05 38.1 4.6 77 85-161 29-117 (137)
211 2v82_A 2-dehydro-3-deoxy-6-pho 89.8 0.59 2E-05 39.2 6.3 65 78-164 23-88 (212)
212 1req_A Methylmalonyl-COA mutas 89.5 2.3 7.8E-05 42.8 11.0 116 48-164 579-708 (727)
213 4fxs_A Inosine-5'-monophosphat 88.8 0.74 2.5E-05 44.3 6.8 61 100-163 233-300 (496)
214 4avf_A Inosine-5'-monophosphat 88.8 0.94 3.2E-05 43.5 7.5 61 100-163 231-298 (490)
215 3ffs_A Inosine-5-monophosphate 88.7 0.43 1.5E-05 44.7 4.9 60 100-163 146-212 (400)
216 2i2x_B MTAC, methyltransferase 88.2 1.6 5.6E-05 38.0 8.2 77 81-160 145-227 (258)
217 3nav_A Tryptophan synthase alp 88.2 3.3 0.00011 36.5 10.1 107 50-163 6-132 (271)
218 3vnd_A TSA, tryptophan synthas 88.0 2.3 7.9E-05 37.4 9.0 107 50-163 4-130 (267)
219 3m5v_A DHDPS, dihydrodipicolin 87.9 14 0.00048 32.7 14.6 164 1-171 4-220 (301)
220 1dbt_A Orotidine 5'-phosphate 87.8 6.6 0.00023 33.6 11.7 59 107-169 152-220 (239)
221 2yw3_A 4-hydroxy-2-oxoglutarat 87.1 7.6 0.00026 32.5 11.4 56 101-162 74-130 (207)
222 3sr7_A Isopentenyl-diphosphate 87.0 3.3 0.00011 38.1 9.8 146 5-163 79-237 (365)
223 3usb_A Inosine-5'-monophosphat 86.6 1.2 4.2E-05 42.9 6.9 61 100-163 258-325 (511)
224 3iv3_A Tagatose 1,6-diphosphat 86.1 3.6 0.00012 37.4 9.3 44 122-169 236-286 (332)
225 3m47_A Orotidine 5'-phosphate 86.0 7.9 0.00027 33.0 11.1 112 55-169 56-208 (228)
226 3to5_A CHEY homolog; alpha(5)b 85.6 5.2 0.00018 31.0 9.0 69 77-162 47-115 (134)
227 3igs_A N-acetylmannosamine-6-p 85.3 1.9 6.6E-05 37.0 6.8 63 104-170 43-115 (232)
228 1z41_A YQJM, probable NADH-dep 84.8 12 0.00041 33.7 12.3 84 78-166 148-252 (338)
229 3flu_A DHDPS, dihydrodipicolin 84.3 21 0.00073 31.5 15.7 159 7-171 9-219 (297)
230 3si9_A DHDPS, dihydrodipicolin 84.2 23 0.00078 31.7 15.8 156 11-171 27-235 (315)
231 3i65_A Dihydroorotate dehydrog 84.1 7.4 0.00025 36.5 10.7 111 48-167 159-307 (415)
232 1zco_A 2-dehydro-3-deoxyphosph 84.0 21 0.00071 31.1 15.4 170 8-184 21-254 (262)
233 1ypf_A GMP reductase; GUAC, pu 84.0 0.82 2.8E-05 41.6 4.1 83 77-163 84-177 (336)
234 3iwp_A Copper homeostasis prot 84.0 11 0.00039 33.4 11.3 41 120-162 196-237 (287)
235 3na8_A Putative dihydrodipicol 83.6 24 0.00082 31.5 15.3 159 7-171 26-237 (315)
236 1y80_A Predicted cobalamin bin 83.5 3.2 0.00011 34.7 7.4 77 81-160 110-194 (210)
237 2pgw_A Muconate cycloisomerase 83.4 2.6 8.9E-05 38.8 7.3 65 102-169 209-277 (384)
238 2ekc_A AQ_1548, tryptophan syn 83.3 8.1 0.00028 33.6 10.1 107 51-163 4-129 (262)
239 3gl9_A Response regulator; bet 83.2 5.4 0.00018 29.3 7.9 70 76-162 35-104 (122)
240 1wa3_A 2-keto-3-deoxy-6-phosph 83.2 17 0.00057 29.8 11.7 121 31-162 7-130 (205)
241 1gvf_A Tagatose-bisphosphate a 83.1 24 0.00083 31.2 13.7 59 119-184 190-249 (286)
242 3fok_A Uncharacterized protein 83.1 5 0.00017 36.0 8.7 44 122-168 228-278 (307)
243 4dwd_A Mandelate racemase/muco 83.1 11 0.00039 34.7 11.6 117 46-167 138-275 (393)
244 3mwc_A Mandelate racemase/muco 83.1 14 0.00048 34.2 12.2 117 48-168 164-290 (400)
245 4af0_A Inosine-5'-monophosphat 83.0 1.6 5.5E-05 42.3 5.7 55 3-60 85-139 (556)
246 3ezx_A MMCP 1, monomethylamine 82.8 2 7E-05 36.4 5.8 77 81-160 114-200 (215)
247 3eb2_A Putative dihydrodipicol 82.7 3.9 0.00013 36.4 8.0 124 77-217 28-156 (300)
248 3kp1_A D-ornithine aminomutase 82.4 2.4 8.2E-05 41.9 6.7 76 83-161 630-716 (763)
249 3sz8_A 2-dehydro-3-deoxyphosph 82.3 12 0.0004 33.2 10.8 88 77-167 124-245 (285)
250 3eb2_A Putative dihydrodipicol 82.2 26 0.0009 30.9 13.3 160 6-171 5-216 (300)
251 1qop_A Tryptophan synthase alp 82.2 5.7 0.00019 34.6 8.7 106 51-163 4-129 (268)
252 3i4k_A Muconate lactonizing en 81.8 30 0.001 31.6 13.9 119 46-168 147-280 (383)
253 2r8w_A AGR_C_1641P; APC7498, d 81.8 29 0.00099 31.2 14.1 141 26-171 59-250 (332)
254 1wbh_A KHG/KDPG aldolase; lyas 81.8 22 0.00076 29.8 14.3 144 27-186 9-154 (214)
255 1y0e_A Putative N-acetylmannos 81.6 2.8 9.5E-05 35.2 6.3 63 101-167 27-99 (223)
256 1vrd_A Inosine-5'-monophosphat 81.3 2.3 7.8E-05 40.6 6.2 56 3-61 42-97 (494)
257 3flu_A DHDPS, dihydrodipicolin 81.0 5 0.00017 35.6 8.0 123 77-216 31-158 (297)
258 3l21_A DHDPS, dihydrodipicolin 81.0 5.2 0.00018 35.7 8.1 124 77-216 39-166 (304)
259 1jcn_A Inosine monophosphate d 80.8 1.9 6.7E-05 41.4 5.6 55 3-60 55-109 (514)
260 1mdl_A Mandelate racemase; iso 80.7 11 0.00039 34.0 10.5 64 102-168 208-275 (359)
261 2vc6_A MOSA, dihydrodipicolina 80.3 30 0.001 30.4 15.5 141 26-171 25-213 (292)
262 4adt_A Pyridoxine biosynthetic 80.2 3.4 0.00012 37.0 6.6 75 76-160 30-104 (297)
263 1xrs_B D-lysine 5,6-aminomutas 80.1 3.2 0.00011 36.4 6.3 77 83-162 152-240 (262)
264 3f6p_A Transcriptional regulat 79.6 6.3 0.00021 28.8 7.1 67 76-162 35-101 (120)
265 3cz5_A Two-component response 79.6 17 0.00058 27.5 9.9 67 77-162 41-107 (153)
266 1p4c_A L(+)-mandelate dehydrog 79.6 1.9 6.5E-05 39.9 4.9 148 5-164 65-254 (380)
267 1mxs_A KDPG aldolase; 2-keto-3 79.6 2.9 9.8E-05 35.8 5.7 65 77-163 41-105 (225)
268 3daq_A DHDPS, dihydrodipicolin 79.6 32 0.0011 30.2 15.0 142 26-171 27-215 (292)
269 2c6q_A GMP reductase 2; TIM ba 79.4 1.7 5.7E-05 39.9 4.4 41 120-163 149-189 (351)
270 3na8_A Putative dihydrodipicol 79.2 5 0.00017 36.1 7.4 122 77-215 48-174 (315)
271 1xky_A Dihydrodipicolinate syn 79.0 34 0.0012 30.2 14.7 159 7-171 14-224 (301)
272 1xky_A Dihydrodipicolinate syn 79.0 7.5 0.00026 34.6 8.5 122 77-216 36-163 (301)
273 3vav_A 3-methyl-2-oxobutanoate 78.8 34 0.0011 30.1 13.6 101 10-114 28-146 (275)
274 3daq_A DHDPS, dihydrodipicolin 78.8 4.5 0.00015 35.9 6.9 124 77-217 26-154 (292)
275 3t6k_A Response regulator rece 78.7 9.5 0.00033 28.5 8.0 70 76-162 37-106 (136)
276 2zay_A Response regulator rece 78.7 9.6 0.00033 28.6 8.1 70 76-162 41-110 (147)
277 3o63_A Probable thiamine-phosp 78.6 14 0.00048 31.8 9.9 28 141-168 140-167 (243)
278 2qkf_A 3-deoxy-D-manno-octulos 78.6 26 0.00088 30.8 11.7 88 77-167 119-240 (280)
279 3vcn_A Mannonate dehydratase; 78.5 26 0.00089 32.6 12.4 88 77-167 214-312 (425)
280 3r8r_A Transaldolase; pentose 78.4 24 0.0008 29.8 10.9 44 120-163 142-186 (212)
281 3qze_A DHDPS, dihydrodipicolin 78.3 5.5 0.00019 35.7 7.4 123 77-216 47-174 (314)
282 2ovl_A Putative racemase; stru 78.1 3.8 0.00013 37.4 6.5 66 101-169 209-278 (371)
283 1rd5_A Tryptophan synthase alp 78.0 3.2 0.00011 35.9 5.7 106 51-163 5-125 (262)
284 3eul_A Possible nitrate/nitrit 77.9 13 0.00045 28.1 8.8 42 119-162 76-117 (152)
285 3tak_A DHDPS, dihydrodipicolin 77.9 35 0.0012 29.9 15.2 141 26-171 26-213 (291)
286 3vkj_A Isopentenyl-diphosphate 77.9 2.4 8.1E-05 39.2 4.9 149 5-163 52-218 (368)
287 3l21_A DHDPS, dihydrodipicolin 77.8 37 0.0013 30.0 13.8 157 7-171 17-225 (304)
288 2ojp_A DHDPS, dihydrodipicolin 77.8 7.5 0.00026 34.4 8.1 123 77-216 25-152 (292)
289 3cpr_A Dihydrodipicolinate syn 77.8 7.4 0.00025 34.7 8.1 122 77-216 40-167 (304)
290 3hv2_A Response regulator/HD d 77.6 15 0.0005 27.9 9.0 69 75-162 46-115 (153)
291 3zwt_A Dihydroorotate dehydrog 77.3 5.9 0.0002 36.4 7.4 97 63-167 146-258 (367)
292 4e7p_A Response regulator; DNA 77.2 15 0.00051 27.8 8.9 42 119-162 81-122 (150)
293 3crn_A Response regulator rece 77.1 14 0.00047 27.3 8.5 67 77-162 37-103 (132)
294 2zbt_A Pyridoxal biosynthesis 77.1 3.7 0.00013 36.3 5.8 87 63-164 21-107 (297)
295 2pl1_A Transcriptional regulat 77.0 17 0.00058 26.0 8.8 68 76-162 33-100 (121)
296 3si9_A DHDPS, dihydrodipicolin 76.9 6.1 0.00021 35.5 7.3 123 77-216 46-173 (315)
297 1vs1_A 3-deoxy-7-phosphoheptul 76.8 18 0.00062 31.8 10.2 173 8-184 35-269 (276)
298 1ps9_A 2,4-dienoyl-COA reducta 76.6 24 0.00081 34.8 12.2 85 79-166 146-251 (671)
299 2fli_A Ribulose-phosphate 3-ep 76.6 4.8 0.00017 33.5 6.2 58 120-185 50-108 (220)
300 3tak_A DHDPS, dihydrodipicolin 76.4 5.9 0.0002 35.0 7.0 123 77-216 25-152 (291)
301 3hzh_A Chemotaxis response reg 76.2 12 0.00041 28.7 8.1 42 119-162 98-139 (157)
302 3eez_A Putative mandelate race 76.2 19 0.00064 33.0 10.6 62 104-169 210-273 (378)
303 3eod_A Protein HNR; response r 76.2 8.9 0.0003 28.1 7.1 68 76-162 40-107 (130)
304 3b2n_A Uncharacterized protein 76.2 17 0.00058 26.8 8.8 67 77-162 39-105 (133)
305 3q94_A Fructose-bisphosphate a 76.1 41 0.0014 29.7 14.3 58 119-183 194-252 (288)
306 3gt7_A Sensor protein; structu 76.0 10 0.00036 29.0 7.7 70 76-162 40-109 (154)
307 3lua_A Response regulator rece 75.8 9 0.00031 28.6 7.1 75 69-162 31-109 (140)
308 3hdg_A Uncharacterized protein 75.7 13 0.00046 27.4 8.1 67 76-161 40-106 (137)
309 2rdx_A Mandelate racemase/muco 75.7 4.2 0.00014 37.3 6.0 62 104-169 210-273 (379)
310 3q58_A N-acetylmannosamine-6-p 75.6 6.3 0.00021 33.7 6.7 49 119-170 57-115 (229)
311 4e5t_A Mandelate racemase / mu 75.6 14 0.00048 34.2 9.7 64 101-167 226-293 (404)
312 1nu5_A Chloromuconate cycloiso 75.4 6.5 0.00022 35.8 7.2 63 103-168 208-274 (370)
313 2v9d_A YAGE; dihydrodipicolini 75.4 47 0.0016 30.0 14.1 159 8-171 34-247 (343)
314 1rvk_A Isomerase/lactonizing e 75.4 7.1 0.00024 35.7 7.5 66 101-169 218-288 (382)
315 2qgy_A Enolase from the enviro 75.4 5.3 0.00018 36.8 6.6 64 102-168 213-280 (391)
316 2rfg_A Dihydrodipicolinate syn 75.3 6.9 0.00024 34.7 7.1 123 77-216 24-151 (297)
317 2ojp_A DHDPS, dihydrodipicolin 75.3 42 0.0014 29.4 12.6 141 26-171 26-213 (292)
318 3jva_A Dipeptide epimerase; en 75.1 23 0.0008 31.9 10.9 119 46-169 138-270 (354)
319 2rfg_A Dihydrodipicolinate syn 75.0 43 0.0015 29.4 14.5 142 25-171 24-212 (297)
320 3ozy_A Putative mandelate race 75.0 15 0.00051 33.8 9.6 63 102-167 214-281 (389)
321 1gox_A (S)-2-hydroxy-acid oxid 74.8 3.6 0.00012 37.8 5.3 148 5-165 64-255 (370)
322 3r0j_A Possible two component 74.7 12 0.00039 31.5 8.2 68 76-162 56-123 (250)
323 3qze_A DHDPS, dihydrodipicolin 74.6 46 0.0016 29.5 14.6 156 11-171 28-235 (314)
324 2nql_A AGR_PAT_674P, isomerase 74.5 3.6 0.00012 37.9 5.2 62 102-166 227-292 (388)
325 3jte_A Response regulator rece 74.5 17 0.00059 27.0 8.5 42 119-162 64-105 (143)
326 2qr3_A Two-component system re 74.5 22 0.00075 26.1 9.0 80 69-162 29-108 (140)
327 1o94_A Tmadh, trimethylamine d 74.3 29 0.001 34.5 12.3 83 79-164 154-258 (729)
328 3s1x_A Probable transaldolase; 74.3 40 0.0014 28.7 11.3 45 119-163 143-188 (223)
329 1me8_A Inosine-5'-monophosphat 74.3 2.8 9.5E-05 40.3 4.5 53 6-61 47-99 (503)
330 3cpr_A Dihydrodipicolinate syn 73.9 47 0.0016 29.3 15.7 154 11-171 21-226 (304)
331 3ff4_A Uncharacterized protein 73.8 4.4 0.00015 31.1 4.8 39 77-115 72-110 (122)
332 2og9_A Mandelate racemase/muco 73.8 5 0.00017 37.0 6.1 63 102-167 226-292 (393)
333 3ih1_A Methylisocitrate lyase; 73.8 48 0.0017 29.5 12.3 160 3-169 21-249 (305)
334 3toy_A Mandelate racemase/muco 73.7 32 0.0011 31.5 11.5 119 45-167 165-298 (383)
335 3dg3_A Muconate cycloisomerase 73.5 42 0.0014 30.4 12.2 119 45-167 137-270 (367)
336 3cfy_A Putative LUXO repressor 73.4 18 0.00061 26.9 8.3 68 76-162 37-104 (137)
337 3hdv_A Response regulator; PSI 73.2 13 0.00043 27.5 7.3 43 119-162 67-109 (136)
338 1dbw_A Transcriptional regulat 73.1 15 0.0005 26.7 7.6 41 120-162 63-103 (126)
339 3iwp_A Copper homeostasis prot 73.1 14 0.00047 32.8 8.4 89 76-184 48-149 (287)
340 1vr6_A Phospho-2-dehydro-3-deo 73.0 22 0.00076 32.4 10.0 154 8-167 103-314 (350)
341 2r8w_A AGR_C_1641P; APC7498, d 73.0 7 0.00024 35.3 6.7 122 77-216 58-185 (332)
342 3a5f_A Dihydrodipicolinate syn 72.6 49 0.0017 28.9 14.5 156 11-171 7-213 (291)
343 1nvm_A HOA, 4-hydroxy-2-oxoval 72.5 31 0.0011 31.0 11.0 102 26-130 153-267 (345)
344 1i4n_A Indole-3-glycerol phosp 72.2 6.9 0.00024 34.0 6.2 55 108-165 74-132 (251)
345 3cnb_A DNA-binding response re 72.1 25 0.00087 25.8 8.9 44 119-162 69-112 (143)
346 1r0m_A N-acylamino acid racema 71.6 49 0.0017 29.9 12.2 117 46-166 147-272 (375)
347 1o5k_A DHDPS, dihydrodipicolin 71.5 15 0.00051 32.7 8.4 123 77-216 36-163 (306)
348 3rqi_A Response regulator prot 71.4 8.1 0.00028 30.8 6.1 67 77-162 41-107 (184)
349 1geq_A Tryptophan synthase alp 71.3 2.3 7.9E-05 36.4 2.9 93 65-164 6-116 (248)
350 3f6c_A Positive transcription 71.1 13 0.00044 27.3 6.9 81 77-184 36-116 (134)
351 2ehh_A DHDPS, dihydrodipicolin 71.0 14 0.00047 32.7 8.0 123 77-216 24-151 (294)
352 3h5d_A DHDPS, dihydrodipicolin 70.9 12 0.00042 33.4 7.7 124 77-217 31-160 (311)
353 3kht_A Response regulator; PSI 70.7 30 0.001 25.7 9.7 69 77-162 41-109 (144)
354 3ugv_A Enolase; enzyme functio 70.7 40 0.0014 30.9 11.5 119 46-167 170-304 (390)
355 1eep_A Inosine 5'-monophosphat 70.6 3.6 0.00012 38.1 4.3 60 101-163 156-222 (404)
356 1zgz_A Torcad operon transcrip 70.6 20 0.00069 25.6 7.8 66 77-162 36-101 (122)
357 1dxe_A 2-dehydro-3-deoxy-galac 70.6 29 0.001 29.8 9.9 132 24-165 80-239 (256)
358 3tj4_A Mandelate racemase; eno 70.5 51 0.0017 29.9 12.1 117 47-167 151-282 (372)
359 1jbe_A Chemotaxis protein CHEY 70.3 24 0.00082 25.4 8.3 69 77-162 39-107 (128)
360 2zc8_A N-acylamino acid racema 70.3 34 0.0012 30.8 10.8 117 47-167 141-266 (369)
361 1srr_A SPO0F, sporulation resp 70.0 18 0.00061 26.1 7.4 67 77-162 37-103 (124)
362 1xhf_A DYE resistance, aerobic 70.0 23 0.0008 25.3 8.1 66 77-162 37-102 (123)
363 2ehh_A DHDPS, dihydrodipicolin 70.0 56 0.0019 28.6 15.7 141 26-171 25-213 (294)
364 3qfe_A Putative dihydrodipicol 69.9 24 0.00082 31.5 9.5 123 77-216 35-165 (318)
365 3d0c_A Dihydrodipicolinate syn 69.8 13 0.00045 33.2 7.7 119 77-216 36-158 (314)
366 1o5k_A DHDPS, dihydrodipicolin 69.8 59 0.002 28.7 13.7 142 26-171 37-228 (306)
367 3q45_A Mandelate racemase/muco 69.8 48 0.0017 30.0 11.7 118 46-168 139-270 (368)
368 3s5o_A 4-hydroxy-2-oxoglutarat 69.4 60 0.002 28.7 13.8 160 7-171 16-229 (307)
369 2nv1_A Pyridoxal biosynthesis 69.4 12 0.00043 33.0 7.4 89 62-167 20-110 (305)
370 2yxg_A DHDPS, dihydrodipicolin 69.4 13 0.00046 32.7 7.6 123 77-216 24-151 (289)
371 3ve9_A Orotidine-5'-phosphate 69.3 6.3 0.00022 33.4 5.1 46 122-170 141-187 (215)
372 3fkr_A L-2-keto-3-deoxyarabona 69.2 11 0.00039 33.5 7.1 122 77-216 32-161 (309)
373 2zad_A Muconate cycloisomerase 69.2 12 0.00041 33.6 7.4 112 46-162 138-264 (345)
374 3rr1_A GALD, putative D-galact 69.2 24 0.00081 32.7 9.6 117 45-166 123-262 (405)
375 2qxy_A Response regulator; reg 69.1 14 0.0005 27.4 6.9 68 75-162 36-103 (142)
376 4a29_A Engineered retro-aldol 68.9 12 0.0004 32.8 6.8 48 117-167 90-137 (258)
377 1tmy_A CHEY protein, TMY; chem 68.9 28 0.00097 24.7 8.6 67 77-162 37-103 (120)
378 2qzj_A Two-component response 68.9 15 0.0005 27.4 6.8 66 77-162 38-103 (136)
379 3b4u_A Dihydrodipicolinate syn 68.7 11 0.00036 33.4 6.8 81 77-169 27-111 (294)
380 1o60_A 2-dehydro-3-deoxyphosph 68.7 47 0.0016 29.3 11.0 88 77-167 122-243 (292)
381 2ftp_A Hydroxymethylglutaryl-C 68.5 37 0.0013 29.9 10.3 124 26-154 34-195 (302)
382 2pp0_A L-talarate/galactarate 68.4 7.8 0.00027 35.8 6.0 63 102-167 239-305 (398)
383 1jub_A Dihydroorotate dehydrog 68.4 8.1 0.00028 34.2 5.9 48 47-94 142-192 (311)
384 3m5v_A DHDPS, dihydrodipicolin 68.1 19 0.00064 31.9 8.3 124 77-216 31-159 (301)
385 3ro6_B Putative chloromuconate 68.0 16 0.00053 33.2 7.9 118 46-168 139-271 (356)
386 3e96_A Dihydrodipicolinate syn 67.9 15 0.00051 32.9 7.6 80 77-169 36-119 (316)
387 2a9o_A Response regulator; ess 67.9 26 0.00088 24.8 7.9 66 77-162 35-100 (120)
388 2gl5_A Putative dehydratase pr 67.9 9.7 0.00033 35.2 6.6 64 101-167 236-303 (410)
389 2hzg_A Mandelate racemase/muco 67.8 7.1 0.00024 36.1 5.6 65 102-169 214-283 (401)
390 2p8b_A Mandelate racemase/muco 67.7 5.6 0.00019 36.2 4.8 61 106-169 209-273 (369)
391 1ujp_A Tryptophan synthase alp 67.6 19 0.00064 31.5 8.0 105 54-166 6-129 (271)
392 3q9s_A DNA-binding response re 67.6 20 0.00067 30.2 8.1 67 76-162 70-136 (249)
393 3a5f_A Dihydrodipicolinate syn 67.5 24 0.00082 31.0 8.8 81 77-169 25-109 (291)
394 3h5d_A DHDPS, dihydrodipicolin 67.5 67 0.0023 28.5 13.2 142 25-171 31-219 (311)
395 2vc6_A MOSA, dihydrodipicolina 67.4 16 0.00054 32.2 7.6 81 77-169 24-108 (292)
396 1tkk_A Similar to chloromucona 67.4 13 0.00045 33.6 7.3 118 46-168 139-273 (366)
397 3stp_A Galactonate dehydratase 67.3 9.8 0.00033 35.4 6.5 64 102-168 249-316 (412)
398 3r4e_A Mandelate racemase/muco 67.1 8 0.00027 36.1 5.8 64 101-167 238-305 (418)
399 2rjn_A Response regulator rece 67.1 20 0.0007 27.0 7.5 67 77-162 41-108 (154)
400 2ox4_A Putative mandelate race 67.1 8.2 0.00028 35.6 5.9 65 101-168 227-295 (403)
401 2qde_A Mandelate racemase/muco 66.7 8.5 0.00029 35.5 5.9 63 102-167 208-274 (397)
402 2yci_X 5-methyltetrahydrofolat 66.6 64 0.0022 28.1 11.3 63 48-115 63-130 (271)
403 2v9d_A YAGE; dihydrodipicolini 66.6 15 0.00053 33.2 7.5 123 77-216 55-182 (343)
404 2xz9_A Phosphoenolpyruvate-pro 66.4 32 0.0011 30.9 9.5 130 32-167 132-281 (324)
405 1yxy_A Putative N-acetylmannos 66.4 11 0.00037 31.7 6.2 65 100-168 39-113 (234)
406 1qwg_A PSL synthase;, (2R)-pho 66.4 51 0.0017 28.5 10.3 126 46-188 52-199 (251)
407 1a04_A Nitrate/nitrite respons 66.3 28 0.00096 28.1 8.6 67 77-162 41-107 (215)
408 3v3w_A Starvation sensing prot 66.3 9.1 0.00031 35.8 6.1 64 101-167 244-311 (424)
409 1tv5_A Dhodehase, dihydroorota 66.2 19 0.00065 33.9 8.3 50 49-98 158-220 (443)
410 4dad_A Putative pilus assembly 66.0 16 0.00056 27.2 6.7 41 120-162 83-123 (146)
411 1qkk_A DCTD, C4-dicarboxylate 65.9 13 0.00043 28.3 6.0 41 120-162 63-103 (155)
412 3sgz_A Hydroxyacid oxidase 2; 65.8 6.9 0.00024 35.8 5.0 40 52-94 206-245 (352)
413 2ps2_A Putative mandelate race 65.7 9.3 0.00032 34.8 5.9 58 107-168 215-274 (371)
414 3rcy_A Mandelate racemase/muco 65.7 12 0.00039 35.2 6.7 60 102-164 222-285 (433)
415 2gkg_A Response regulator homo 65.6 17 0.00058 26.0 6.5 71 75-162 37-107 (127)
416 3lte_A Response regulator; str 65.5 30 0.001 25.0 8.0 69 76-162 39-107 (132)
417 2poz_A Putative dehydratase; o 65.4 8.6 0.0003 35.3 5.7 63 102-167 218-284 (392)
418 1f6k_A N-acetylneuraminate lya 65.4 23 0.0008 31.1 8.3 81 77-169 27-112 (293)
419 2p10_A MLL9387 protein; putati 65.1 42 0.0014 29.6 9.7 141 7-162 24-189 (286)
420 2nx9_A Oxaloacetate decarboxyl 64.8 74 0.0025 30.0 12.1 87 26-112 162-259 (464)
421 1tzz_A Hypothetical protein L1 64.8 7.6 0.00026 35.7 5.2 118 47-169 165-301 (392)
422 3s5o_A 4-hydroxy-2-oxoglutarat 64.8 13 0.00046 33.0 6.7 123 77-216 38-167 (307)
423 3qfe_A Putative dihydrodipicol 64.5 77 0.0026 28.1 13.0 49 119-171 180-228 (318)
424 3h1g_A Chemotaxis protein CHEY 64.5 38 0.0013 24.6 8.5 44 119-162 66-109 (129)
425 2wkj_A N-acetylneuraminate lya 64.5 24 0.00082 31.2 8.3 123 77-216 35-163 (303)
426 3mkc_A Racemase; metabolic pro 64.4 7.3 0.00025 36.0 5.0 63 102-167 225-291 (394)
427 3sbf_A Mandelate racemase / mu 64.4 11 0.00036 35.0 6.1 64 102-168 220-287 (401)
428 1kbi_A Cytochrome B2, L-LCR; f 64.2 6.2 0.00021 38.0 4.5 151 4-163 181-371 (511)
429 3mqt_A Mandelate racemase/muco 64.0 6 0.0002 36.6 4.3 65 101-168 219-287 (394)
430 2bdq_A Copper homeostasis prot 64.0 23 0.0008 30.1 7.6 66 100-168 136-211 (224)
431 1twd_A Copper homeostasis prot 63.9 24 0.0008 30.8 7.8 69 117-191 37-119 (256)
432 3m6m_D Sensory/regulatory prot 63.7 43 0.0015 24.9 9.7 69 77-162 48-118 (143)
433 3cg0_A Response regulator rece 63.6 40 0.0014 24.6 8.7 68 76-162 43-110 (140)
434 2bdq_A Copper homeostasis prot 63.5 26 0.0009 29.8 7.8 39 148-189 81-120 (224)
435 3kcn_A Adenylate cyclase homol 63.5 44 0.0015 25.0 9.2 42 119-162 63-105 (151)
436 3luf_A Two-component system re 63.3 68 0.0023 27.0 14.2 142 10-162 74-227 (259)
437 2o56_A Putative mandelate race 63.2 9.4 0.00032 35.2 5.5 63 102-167 234-300 (407)
438 3ngj_A Deoxyribose-phosphate a 63.2 24 0.00081 30.4 7.6 119 45-167 39-181 (239)
439 3qtg_A Pyruvate kinase, PK; TI 63.1 50 0.0017 31.2 10.4 97 66-163 165-322 (461)
440 3tji_A Mandelate racemase/muco 63.1 12 0.00041 35.0 6.2 64 102-168 241-308 (422)
441 3ddm_A Putative mandelate race 62.9 26 0.00091 32.1 8.5 61 103-166 219-284 (392)
442 2yxg_A DHDPS, dihydrodipicolin 62.7 78 0.0027 27.6 15.2 139 26-171 25-211 (289)
443 3bul_A Methionine synthase; tr 62.6 20 0.00068 35.0 7.8 84 78-161 116-209 (579)
444 1p0k_A Isopentenyl-diphosphate 62.5 8.9 0.00031 34.6 5.1 41 120-163 167-209 (349)
445 2pcq_A Putative dihydrodipicol 62.5 25 0.00087 30.7 8.0 47 119-171 157-203 (283)
446 4dxk_A Mandelate racemase / mu 62.5 14 0.00047 34.2 6.5 62 103-167 230-295 (400)
447 3go2_A Putative L-alanine-DL-g 62.5 11 0.00038 34.9 5.9 60 102-164 232-293 (409)
448 2nzl_A Hydroxyacid oxidase 1; 62.3 5.6 0.00019 36.9 3.7 149 4-164 86-281 (392)
449 1mb3_A Cell division response 62.3 23 0.00079 25.3 6.7 69 77-162 35-103 (124)
450 4e4u_A Mandalate racemase/muco 62.2 11 0.00039 35.0 5.8 63 102-167 220-286 (412)
451 1k68_A Phytochrome response re 62.0 34 0.0012 24.8 7.7 43 120-162 71-113 (140)
452 3hv8_A Protein FIMX; EAL phosp 62.0 12 0.0004 32.2 5.6 38 123-161 211-248 (268)
453 2qq6_A Mandelate racemase/muco 61.9 13 0.00045 34.3 6.3 60 102-164 229-292 (410)
454 2nli_A Lactate oxidase; flavoe 61.9 8.1 0.00028 35.5 4.7 38 123-164 221-258 (368)
455 3nhm_A Response regulator; pro 61.7 30 0.001 25.1 7.3 70 75-162 35-104 (133)
456 4drs_A Pyruvate kinase; glycol 61.7 25 0.00086 33.9 8.2 30 134-163 321-362 (526)
457 1kgs_A DRRD, DNA binding respo 61.5 16 0.00056 29.6 6.3 68 76-162 35-102 (225)
458 1sjd_A N-acylamino acid racema 61.4 12 0.00042 33.9 5.9 115 47-166 141-266 (368)
459 1chr_A Chloromuconate cycloiso 61.4 16 0.00056 33.2 6.7 62 104-168 209-274 (370)
460 2e6f_A Dihydroorotate dehydrog 61.2 12 0.00041 33.1 5.7 48 47-94 144-195 (314)
461 3dz1_A Dihydrodipicolinate syn 60.7 19 0.00063 32.2 6.8 122 77-216 32-159 (313)
462 1a3w_A Pyruvate kinase; allost 60.7 35 0.0012 32.7 9.0 97 66-163 177-332 (500)
463 2ftp_A Hydroxymethylglutaryl-C 60.6 87 0.003 27.4 11.5 98 15-113 149-268 (302)
464 3grc_A Sensor protein, kinase; 60.5 14 0.00049 27.3 5.3 70 76-162 39-109 (140)
465 3oa3_A Aldolase; structural ge 60.2 66 0.0023 28.4 10.1 47 121-167 162-212 (288)
466 3qvq_A Phosphodiesterase OLEI0 60.0 58 0.002 27.6 9.7 82 76-163 152-238 (252)
467 3i6e_A Muconate cycloisomerase 59.9 95 0.0033 28.2 11.7 118 46-168 147-278 (385)
468 1yad_A Regulatory protein TENI 59.8 14 0.00047 30.8 5.5 60 103-166 81-140 (221)
469 2gdq_A YITF; mandelate racemas 59.7 11 0.00037 34.6 5.2 61 103-166 204-269 (382)
470 2h9a_B CO dehydrogenase/acetyl 59.6 56 0.0019 29.1 9.7 98 46-144 105-211 (310)
471 1mvo_A PHOP response regulator 59.4 32 0.0011 25.1 7.1 67 77-162 37-103 (136)
472 2wkj_A N-acetylneuraminate lya 59.4 92 0.0032 27.3 13.1 159 6-171 12-223 (303)
473 3ble_A Citramalate synthase fr 59.4 98 0.0034 27.6 13.0 88 26-113 173-273 (337)
474 3r0u_A Enzyme of enolase super 59.2 1E+02 0.0036 27.9 13.0 119 45-168 140-274 (379)
475 3mm4_A Histidine kinase homolo 59.1 36 0.0012 27.6 7.9 44 119-162 134-180 (206)
476 3g8r_A Probable spore coat pol 59.1 44 0.0015 30.4 9.0 78 77-162 81-166 (350)
477 2ayx_A Sensor kinase protein R 59.0 40 0.0014 28.4 8.5 74 84-162 150-229 (254)
478 4dbe_A Orotidine 5'-phosphate 58.9 31 0.0011 29.1 7.6 68 101-171 126-195 (222)
479 1xi3_A Thiamine phosphate pyro 58.8 38 0.0013 27.6 8.1 65 77-164 29-94 (215)
480 2hxt_A L-fuconate dehydratase; 58.8 63 0.0022 30.0 10.5 60 106-167 265-328 (441)
481 3n53_A Response regulator rece 58.6 27 0.00091 25.8 6.6 71 75-162 34-104 (140)
482 3fv9_G Mandelate racemase/muco 58.4 90 0.0031 28.4 11.3 117 45-167 143-277 (386)
483 1dz3_A Stage 0 sporulation pro 58.1 50 0.0017 23.8 8.2 68 77-162 38-105 (130)
484 3t6c_A RSPA, putative MAND fam 58.0 18 0.00062 33.9 6.5 63 103-168 260-326 (440)
485 1f6k_A N-acetylneuraminate lya 57.8 96 0.0033 27.0 14.1 157 8-171 6-215 (293)
486 4dpp_A DHDPS 2, dihydrodipicol 57.6 44 0.0015 30.5 8.8 80 77-169 83-167 (360)
487 1aj0_A DHPS, dihydropteroate s 57.6 55 0.0019 28.7 9.2 63 49-115 73-138 (282)
488 3my9_A Muconate cycloisomerase 57.6 18 0.0006 33.1 6.2 65 101-168 209-277 (377)
489 3tml_A 2-dehydro-3-deoxyphosph 57.5 62 0.0021 28.6 9.5 86 77-167 121-246 (288)
490 2tps_A Protein (thiamin phosph 57.5 17 0.00057 30.2 5.7 67 77-165 34-103 (227)
491 2gwr_A DNA-binding response re 57.3 17 0.00059 30.1 5.8 66 77-162 39-104 (238)
492 2d59_A Hypothetical protein PH 57.1 20 0.0007 27.8 5.8 39 77-115 91-129 (144)
493 3t05_A Pyruvate kinase, PK; te 57.0 52 0.0018 32.3 9.6 86 77-163 196-332 (606)
494 1k66_A Phytochrome response re 56.8 43 0.0015 24.6 7.6 43 120-162 78-120 (149)
495 2oz8_A MLL7089 protein; struct 56.7 30 0.001 31.6 7.7 112 47-163 145-273 (389)
496 3bre_A Probable two-component 56.6 49 0.0017 29.0 9.0 71 75-162 51-121 (358)
497 2r25_B Osmosensing histidine p 56.6 55 0.0019 23.9 9.3 42 120-162 68-109 (133)
498 1p6q_A CHEY2; chemotaxis, sign 56.4 40 0.0014 24.2 7.2 68 77-161 41-108 (129)
499 3hqn_D Pyruvate kinase, PK; TI 56.2 60 0.002 31.0 9.7 86 77-163 195-331 (499)
500 3tfx_A Orotidine 5'-phosphate 56.1 1E+02 0.0034 26.7 12.7 36 135-170 178-223 (259)
No 1
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.1e-46 Score=350.31 Aligned_cols=269 Identities=33% Similarity=0.530 Sum_probs=228.3
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCC-cHHHHH
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP-HNENIK 81 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~-~~~~~~ 81 (300)
|+++|+++||||||||+ |+|+++|+.+|+++|++|++... +.++++++++++++|+.+++||+||++...+ ..+.++
T Consensus 19 ~~~~l~~~~Pii~apM~-gvs~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~ 96 (326)
T 3bo9_A 19 VTDLLEIEHPILMGGMA-WAGTPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVK 96 (326)
T ss_dssp HHHHHTCSSSEEECCCT-TTSCHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHH
T ss_pred hHHhcCCCCCEEECCCC-CCCCHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHH
Confidence 67889999999999999 89999999999999999999874 6799999999999999999999999998554 467899
Q ss_pred HHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec-------------------------------cChhchHHHHHHhh
Q 022271 82 AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-------------------------------DGLISLLPMVVDLI 130 (300)
Q Consensus 82 ~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-------------------------------~~~~~ll~~v~~~~ 130 (300)
.+++.++++|.+++|.| .++++.+++.|++++.. ...+.+++++++.+
T Consensus 97 ~~~~~g~d~V~l~~g~p-~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~ 175 (326)
T 3bo9_A 97 VCIEEKVPVVTFGAGNP-TKYIRELKENGTKVIPVVASDSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV 175 (326)
T ss_dssp HHHHTTCSEEEEESSCC-HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC
T ss_pred HHHHCCCCEEEECCCCc-HHHHHHHHHcCCcEEEEcCCHHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc
Confidence 99999999999999985 78899999999888763 12567899999887
Q ss_pred CCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecCh
Q 022271 131 GDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTP 210 (300)
Q Consensus 131 ~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~ 210 (300)
++|||++|||.|++++.+++++||++|++||+|+.+.||.+++.||++++++.++++....+ ..|+|+|+|+|+
T Consensus 176 ---~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~---~~G~p~R~l~n~ 249 (326)
T 3bo9_A 176 ---NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASVESDVHPVYKEKIVKASIRDTVVTGA---KLGHPARVLRTP 249 (326)
T ss_dssp ---SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBSSCCSCHHHHHHHHHCCTTCEEEECT---TTTCCEEEECCH
T ss_pred ---CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCccccccHHHHHHHHhcccccEEEecc---cCCCceEEEecH
Confidence 79999999999999999999999999999999999999999999999999987766444443 359999999999
Q ss_pred hhHhhhcCCCCcccCCCcccccccccchHHHHHHhhcccccccccCCcccceeeccccccccCCCCCHHHHHHHHHHHHH
Q 022271 211 FFSNWKNIPAHENEVNQPIIGRSTIHGIEKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVKQLVEGAQ 290 (300)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gd~~~~~~~aGq~~~~i~~i~~a~eiv~~l~~e~~ 290 (300)
|+++|.+... ..++ ..++ +. ...++++..+||.|.+.+|+||++++|+++.|++|||++|++|++
T Consensus 250 ~~~~~~~~~~----~~~~-----~~~~----~~--~~~~~~~~~~g~~~~~~~~aGq~~~~i~~i~~~~eiv~~l~~e~~ 314 (326)
T 3bo9_A 250 FARKIQEMEF----ENPM-----QAEE----ML--VGSLRRAVVEGDLERGSFMVGQSAGLIDEIKPVKQIIEDILKEFK 314 (326)
T ss_dssp HHHHHHHHHH----HCHH-----HHHH----HH--TTHHHHHHTTCCTTTCCCBCCGGGGGCCSCBCHHHHHHHHHHHHH
T ss_pred HHHHhhhccC----CCHH-----HHHH----Hc--cchHHHHHHcCCcccceEEcccChhhcCCCCcHHHHHHHHHHHHH
Confidence 9999874310 0111 1111 10 111234567899999999999999999999999999999999999
Q ss_pred HHHHh
Q 022271 291 LLVHT 295 (300)
Q Consensus 291 ~~l~~ 295 (300)
+++++
T Consensus 315 ~~~~~ 319 (326)
T 3bo9_A 315 ETVEK 319 (326)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 2
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=100.00 E-value=5.7e-46 Score=345.65 Aligned_cols=275 Identities=32% Similarity=0.428 Sum_probs=227.2
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecC----CC-cH
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLA----FP-HN 77 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~----~~-~~ 77 (300)
|+++|+++|||||+||+ |+|+++|+.+|+++|++|++..+++.++++++++++++|+.+++||+||++.+ .+ ..
T Consensus 8 ~~~~l~~~~Pii~apM~-gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~ 86 (328)
T 2gjl_A 8 FTETFGVEHPIMQGGMQ-WVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYA 86 (328)
T ss_dssp HHHHHTCSSSEEECCCT-TTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHH
T ss_pred HHHHhCCCCCEEECCCC-CCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHH
Confidence 78999999999999998 89999999999999999999875445599999999999999999999999997 33 36
Q ss_pred HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----------------------------c-----ChhchHH
Q 022271 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----------------------------D-----GLISLLP 124 (300)
Q Consensus 78 ~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----------------------------~-----~~~~ll~ 124 (300)
+.++.+.+.++++|.+++|.| .++++.+++.|++++.. . ..+.+++
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p-~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~ 165 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDP-GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLP 165 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCC-HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCCCc-HHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHH
Confidence 889999999999999999875 78899999999888763 0 2456788
Q ss_pred HHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCC
Q 022271 125 MVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPH 204 (300)
Q Consensus 125 ~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~ 204 (300)
++++.+ ++|||++|||.+++++.+++++|||+|++||+|+.+.||.+++.||++++++.++++..... ..|.|.
T Consensus 166 ~v~~~~---~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~---~~g~~~ 239 (328)
T 2gjl_A 166 AAANRL---RVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMR---SLRNTA 239 (328)
T ss_dssp HHHTTC---CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSSSSCSCHHHHHHHHHCCTTCEEEECG---GGTCCE
T ss_pred HHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCccccccHHHHHHHHhcccccEEEeec---cCCCce
Confidence 888776 79999999999999999999999999999999999999999999999999986665333332 248999
Q ss_pred ceecChhhHhhhcCCCCcccCCCcccccccccch-HHHHHHhhcccccccccCCcccceeeccccccccCCCCCHHHHHH
Q 022271 205 RVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGI-EKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVK 283 (300)
Q Consensus 205 R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~gd~~~~~~~aGq~~~~i~~i~~a~eiv~ 283 (300)
|+++|+|+++|.+.+.... ..++.. .+.. ...+ +++..+||.|.+.+|+||++++|+++.|++|||+
T Consensus 240 r~~~n~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~-------~~a~~~g~~~~~~~~aG~~~~~~~~~~~~~ei~~ 307 (328)
T 2gjl_A 240 RVARNAISQEVLAIEARGG-AGYADI----AALVSGQRG-------RQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLR 307 (328)
T ss_dssp EEECSHHHHHHHHHHHTSC-CCGGGT----HHHHCHHHH-------HHHHHHCCTTSSCCBCCGGGGGCCCCCCHHHHHH
T ss_pred EEEcCHHHHHHHhhhhccC-CChHHH----HHHHhhHHH-------HHHHHcCCccceEEEcccchhhcCCCCCHHHHHH
Confidence 9999999999875322111 012210 0000 1112 2355789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 022271 284 QLVEGAQLLVHTKF 297 (300)
Q Consensus 284 ~l~~e~~~~l~~~~ 297 (300)
+|++|+++++++++
T Consensus 308 ~l~~e~~~~~~~~~ 321 (328)
T 2gjl_A 308 DIVEQARQLVRQRL 321 (328)
T ss_dssp HHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987344
No 3
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=100.00 E-value=2.6e-45 Score=341.81 Aligned_cols=275 Identities=29% Similarity=0.484 Sum_probs=228.4
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHH
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIK 81 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~ 81 (300)
|+++||++||||++||+ |+|+++|+.+++++|++|++..+ +.++++++++++++|+++++||+||++.+.+. .+.++
T Consensus 5 ~~~~l~~~~Pii~apM~-g~s~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~ 82 (332)
T 2z6i_A 5 ITELLKIDYPIFQGGMA-WVADGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVD 82 (332)
T ss_dssp HHHHHTCSSSEEECCCT-TTCCHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHH
T ss_pred hhHHhCCCCCEEeCCCC-CCCcHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHH
Confidence 78999999999999998 89999999999999999999875 67999999999999999999999999985444 77899
Q ss_pred HHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec-------------------------------cChhchHHHHHHhh
Q 022271 82 AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-------------------------------DGLISLLPMVVDLI 130 (300)
Q Consensus 82 ~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-------------------------------~~~~~ll~~v~~~~ 130 (300)
.+.+.++++|.+++|.| .++++.+++.|+.++.. ...+.+++++++.+
T Consensus 83 ~a~~~g~d~V~~~~g~p-~~~i~~l~~~g~~v~~~v~~~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~ 161 (332)
T 2z6i_A 83 LVIEEGVKVVTTGAGNP-SKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAI 161 (332)
T ss_dssp HHHHTTCSEEEECSSCG-GGTHHHHHHTTCEEEEEESSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC
T ss_pred HHHHCCCCEEEECCCCh-HHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhc
Confidence 99999999999999874 67888888888887753 12467889999887
Q ss_pred CCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecCh
Q 022271 131 GDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTP 210 (300)
Q Consensus 131 ~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~ 210 (300)
++|||++|||.|++++.+++++|||+|+|||+|+.++||.+++.||+++++++++++..... ..|+|.|+++|+
T Consensus 162 ---~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~~e~~~~~~~k~~~~~~~~~d~~~~~~---~~g~~~r~l~n~ 235 (332)
T 2z6i_A 162 ---SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQ---HFGHAVRAIKNQ 235 (332)
T ss_dssp ---SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTBTTCCSCHHHHHHHHHCCTTCEEEESG---GGTCCEEEECSH
T ss_pred ---CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcCccccccHHHHHHHHhCCCcCEEEECC---cCCCcEEEEeCH
Confidence 79999999999999999999999999999999999999999999999999987666433222 248999999999
Q ss_pred hhHhhhcCCCC---cccCCCcccccccccchHHHHHHhhcccccccccCCcccceeeccccccccCCCCCHHHHHHHHHH
Q 022271 211 FFSNWKNIPAH---ENEVNQPIIGRSTIHGIEKKIHRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVKQLVE 287 (300)
Q Consensus 211 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gd~~~~~~~aGq~~~~i~~i~~a~eiv~~l~~ 287 (300)
|+++|.+.+.. .....++ .+++ +. ...++++..+||.|++.+|+||++++++++.|++||+++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~--~~~~~~a~~~g~~~~~~~~aG~~~~~~~~~~~~~ei~~~l~~ 304 (332)
T 2z6i_A 236 LTRDFELAEKDAFKQEDPDLE-----IFEQ----MG--AGALAKAVVHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYY 304 (332)
T ss_dssp HHHHHHHHHHHHHTC---CCH-----HHHH----HH--TTHHHHHHTTCCTTTSCCBCCGGGGGCCCCBCHHHHHHHHHH
T ss_pred HHHHHHhhccccccccCCCHH-----HHHH----Hc--cchHHHHHHcCCcccceEecCcChhhcCCCCCHHHHHHHHHH
Confidence 99998753200 0000111 1111 10 111224557899999999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 022271 288 GAQLLVHTKF 297 (300)
Q Consensus 288 e~~~~l~~~~ 297 (300)
|+++++++++
T Consensus 305 e~~~~~~~~~ 314 (332)
T 2z6i_A 305 GAAKKIQEEA 314 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998755
No 4
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=100.00 E-value=1.2e-43 Score=334.95 Aligned_cols=267 Identities=33% Similarity=0.540 Sum_probs=222.1
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCC-------
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP------- 75 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~------- 75 (300)
|+++| +||||||||++|+|+++|+++|+++|++|+++. ++.++++++++|+++++++++|||||++.+.+
T Consensus 5 ~~~~~--~~Pii~apMaggvs~~~la~av~~aGglG~i~~-~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~ 81 (369)
T 3bw2_A 5 LTDLF--PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAA-GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGA 81 (369)
T ss_dssp TTTSS--SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEEC-TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CH
T ss_pred hhhhC--cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHH
Confidence 56777 999999999845999999999999999999987 47899999999999999999999999998654
Q ss_pred -----------------------------cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----------
Q 022271 76 -----------------------------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ---------- 116 (300)
Q Consensus 76 -----------------------------~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~---------- 116 (300)
..+.++.+.+.++++|.+++|.|+.++++.+++.|+.++..
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~~g~~v~~~v~t~~~a~~a 161 (369)
T 3bw2_A 82 VEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDREVIARLRRAGTLTLVTATTPEEARAV 161 (369)
T ss_dssp HHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHHCCCeEEEECCCHHHHHHH
Confidence 25678889999999999999988788999999888877642
Q ss_pred ---------c---------C--------------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 117 ---------D---------G--------------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 117 ---------~---------~--------------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
. + ++.+++++++.+ ++|||++|||.|++++.+++++|||+|+|||
T Consensus 162 ~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~---~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs 238 (369)
T 3bw2_A 162 EAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV---DIPVVAAGGIMRGGQIAAVLAAGADAAQLGT 238 (369)
T ss_dssp HHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc---CceEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 0 1 156678888776 7999999999999999999999999999999
Q ss_pred ccccCcccCCCHHHHHHHHcCCC--cceEEEecccCCCCCCCceecChhhHhhhcCCCCcccCCCcccccccccchHHHH
Q 022271 165 RFVASEESYAHPEYKRKLVEMDK--TEYTDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGIEKKI 242 (300)
Q Consensus 165 ~fl~t~Es~~~~~~k~~i~~a~~--t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (300)
+|+.++|+..++.||+.|+++.. +.++.. ..|+|.|+++|+|+++|..... ..+| .++.+...+
T Consensus 239 ~~~~~~e~~~~~~~k~~i~~~~~~~~~~~~~-----~~g~~~r~~~n~~~~~~~~~~~----~~~~-----~~~~~~~~~ 304 (369)
T 3bw2_A 239 AFLATDESGAPGPHKRALTDPLFARTRLTRA-----FTGRPARSLVNRFLREHGPYAP----AAYP-----DVHHLTSPL 304 (369)
T ss_dssp HHHTSTTCCCCHHHHHHTTCGGGCCEEEEST-----TTSSCEEEECCHHHHHHGGGCC----SCTT-----HHHHHHHHH
T ss_pred HHhCCcccCccHHHHHHHHhCcCCCEEEEec-----cCCCcEEEEeCHHHHHhhccCC----CChH-----HHHHHHHHH
Confidence 99999999999999999999754 333322 3489999999999999875421 1222 222223333
Q ss_pred HHhhcccccccccCCcccceeeccccccccCCCCCHHHHHHHHHHHHHHHHHhh
Q 022271 243 HRLAGTVPNVTTTGDIDSMVMFAGEGVGLIREILPAGEVVKQLVEGAQLLVHTK 296 (300)
Q Consensus 243 ~~~~~~~~~a~~~gd~~~~~~~aGq~~~~i~~i~~a~eiv~~l~~e~~~~l~~~ 296 (300)
++ .+...||.|++.+|+||+++++++ .|++|||++|++|+++++++.
T Consensus 305 ~~------~~~~~g~~~~~~~~aGq~~~~~~~-~~~~eiv~~l~~e~~~~~~~~ 351 (369)
T 3bw2_A 305 RK------AAAKAGDAQGMALWAGQGHRMARE-LPAGRLVEVLAAELAEARTAL 351 (369)
T ss_dssp HH------HHHHHTCGGGSCCBCCTTGGGCCC-SCHHHHHHHHHHHHHHHHHHT
T ss_pred HH------HHHhcCChhhEeEEcccccCcCCC-CcHHHHHHHHHHHHHHHHHHH
Confidence 32 234679999999999999999998 899999999999999988653
No 5
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=100.00 E-value=1.7e-38 Score=347.48 Aligned_cols=270 Identities=19% Similarity=0.203 Sum_probs=208.4
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc----
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH---- 76 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~---- 76 (300)
|++++| ++|||||||++++++++||+||+|+||+|+|+.+++++++.++++|+++|+.+ ++||+||++...+.
T Consensus 576 ~t~~lg-~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~ 654 (2060)
T 2uva_G 576 MSRLLG-VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGW 654 (2060)
T ss_dssp HHHHHT-SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHH
T ss_pred hhhccc-cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCcccchh
Confidence 788999 99999999986799999999999999999994335789999999999999998 79999999987665
Q ss_pred -HHHHHHHHHcCCcE--EEEcCCCCcH-HHHHHHHHCCCeEeec-----------------------------------c
Q 022271 77 -NENIKAILSEKVAV--LQVSWGEYSE-ELVLEAHSAGVKVVPQ-----------------------------------D 117 (300)
Q Consensus 77 -~~~~~~~~e~g~~~--i~~~~G~~~~-~~v~~~~~~G~~v~~~-----------------------------------~ 117 (300)
.+.++.++++|+++ |++++|.|.. ++++.+++.|+.+++. .
T Consensus 655 ~~~~~~~~~~~gv~i~gv~~~~G~p~~e~~~~~l~~~gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~ 734 (2060)
T 2uva_G 655 QIPLLGRLRADGVPIEGLTIGAGVPSIEVANEYIQTLGIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHH 734 (2060)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESSCCCHHHHHHHHHHSCCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSC
T ss_pred HHHHHHHHHHcCCCcceEeecCCCCCHHHHHHHHHHcCCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCC
Confidence 36789999999999 9999998764 5778888888776653 1
Q ss_pred -------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH-----------HCCCcEEEeccccccCcccCCCHHHH
Q 022271 118 -------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYAHPEYK 179 (300)
Q Consensus 118 -------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal-----------~lGAdgV~~GT~fl~t~Es~~~~~~k 179 (300)
+++.++|+|++.+ ++|||++|||+|+++++++| +||||||||||+|++|+||++|+.||
T Consensus 735 g~~d~~~~~l~lv~~i~~~~---~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~K 811 (2060)
T 2uva_G 735 SFEDFHQPILLMYSRIRKCS---NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQAK 811 (2060)
T ss_dssp CSCCSHHHHHHHHHHHHTST---TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHHH
T ss_pred CcccccchHHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHHH
Confidence 1466899999987 89999999999999999999 99999999999999999999999999
Q ss_pred HHHHcCCCcce-------------EEEecccCCCCCCCceecChhhHhhhcCCCCcccCCCcccccccccchHHHHHHhh
Q 022271 180 RKLVEMDKTEY-------------TDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPIIGRSTIHGIEKKIHRLA 246 (300)
Q Consensus 180 ~~i~~a~~t~~-------------t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (300)
++|++++++|. ...+. .+.|.|+|+|+|+|++.|.+++... ..+|.. .+.++... +++..
T Consensus 812 ~~lv~a~~~dt~~w~~~~~~~~ggv~t~~--s~~G~p~R~l~n~~~~~~~~~~~~~--~~~~~~--~~~~~l~~-~~~~~ 884 (2060)
T 2uva_G 812 QAIVDAPGVDDDQWENTYKRPTGGVITVL--SEMGEPIHKLATRGVLFWKELDDKI--FSLDRS--KRVAELKK-RRDYI 884 (2060)
T ss_dssp HHHHTSCCCCSTTSGGGGTSCCTTEEEEE--CSSSCEEEEECCHHHHHHHHHHHHT--TTSCHH--HHHHHHHH-SHHHH
T ss_pred HHHHhCCcccccchhccccCCCceEEEec--ccCCCCeEEEeCHHHHHHHhhhhcc--cCCChH--HHHHHHHH-HHHHH
Confidence 99999876553 22211 1359999999999999987542210 111200 00111111 11110
Q ss_pred cccccccccCCcccce---eeccccccccCCCCCHHHHHHHHHHHH
Q 022271 247 GTVPNVTTTGDIDSMV---MFAGEGVGLIREILPAGEVVKQLVEGA 289 (300)
Q Consensus 247 ~~~~~a~~~gd~~~~~---~~aGq~~~~i~~i~~a~eiv~~l~~e~ 289 (300)
.....||.+.+. +++||++++ ++.|++||+++|++++
T Consensus 885 ----~~~~~~d~~~~~~G~~~~G~~~~~--~~~~~~eiv~~l~~~~ 924 (2060)
T 2uva_G 885 ----IKKLNDDFQKVWFGRNSAGEPVDL--EDMTYAEVVHRMVELM 924 (2060)
T ss_dssp ----HHHHHHHSSSEETTBCTTSCBCCG--GGCBHHHHHHHHHHHH
T ss_pred ----HHhcCCchhhhhhheeecccccCC--CCCcHHHHHHHHHHHh
Confidence 000234444333 456666677 7899999999999875
No 6
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=100.00 E-value=3.2e-37 Score=335.67 Aligned_cols=211 Identities=19% Similarity=0.246 Sum_probs=177.3
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcC--CcEEeeeecCCCc----
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE--RPFGVGVVLAFPH---- 76 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~--~P~gvnl~~~~~~---- 76 (300)
|+++|| +||||||||++++++++||+|||||||+|+|+++++.+++.++++|+++|++|+ +|||||++...+.
T Consensus 583 ~t~llg-~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~ 661 (2051)
T 2uv8_G 583 FSKLIG-RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQW 661 (2051)
T ss_dssp HHHHHS-SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHHH
T ss_pred HHHhhC-ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhhh
Confidence 789999 699999999865679999999999999999966568899999999999999986 7999999987654
Q ss_pred -HHHHHHHHHcCCcE--EEEcCCCCc-HHHHHHHHHCCCeEeec-----------------------------------c
Q 022271 77 -NENIKAILSEKVAV--LQVSWGEYS-EELVLEAHSAGVKVVPQ-----------------------------------D 117 (300)
Q Consensus 77 -~~~~~~~~e~g~~~--i~~~~G~~~-~~~v~~~~~~G~~v~~~-----------------------------------~ 117 (300)
.+.++.++++|+++ |.+++|.|. +..++.++..|+++++. .
T Consensus 662 ~~~~~~~~~~~gv~i~~v~~~ag~p~~~~~~~~i~~lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~ 741 (2051)
T 2uv8_G 662 GIPLIKELRSKGYPIQFLTIGAGVPSLEVASEYIETLGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHH 741 (2051)
T ss_dssp HHHHHHHHHHTTCSEEEEEEESSCCCHHHHHHHHHHSCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEEC
T ss_pred hHHHHHHHHHcCCCcceEEecCCCCchhhHHHHHHHcCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCC
Confidence 36789999999999 999999875 33444455557776652 1
Q ss_pred C-------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH-----------HCCCcEEEeccccccCcccCCCHHHH
Q 022271 118 G-------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYAHPEYK 179 (300)
Q Consensus 118 ~-------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal-----------~lGAdgV~~GT~fl~t~Es~~~~~~k 179 (300)
| ++.++|+|++++ +|||||+|||+||++++++| +||||||+|||||++|+||.+|++||
T Consensus 742 g~~d~~~~~l~l~~~v~~~~---~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K 818 (2051)
T 2uv8_G 742 SFEDAHTPMLQMYSKIRRHP---NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAK 818 (2051)
T ss_dssp CSCCSSHHHHHHHHHHTTCT---TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHH
T ss_pred CcccccccHHHHHHHHHhcC---CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCcccccCHHHH
Confidence 1 455799999998 89999999999999999999 89999999999999999999999999
Q ss_pred HHHHcCCCcce-------------EEEecccCCCCCCCceecChhhHhhhcCC
Q 022271 180 RKLVEMDKTEY-------------TDVFGRARWPGAPHRVLQTPFFSNWKNIP 219 (300)
Q Consensus 180 ~~i~~a~~t~~-------------t~~~~~~~~~g~~~R~l~n~~~~~~~~~~ 219 (300)
++|+++++++. ...... --|.|.|.|+|++++.|.+++
T Consensus 819 ~~iv~a~~~d~~~w~~~~~~~~gG~~~~~s--~~g~~~r~l~~~~~~~~~~~~ 869 (2051)
T 2uv8_G 819 KCIAACTGVPDDKWEQTYKKPTGGIVTVRS--EMGEPIHKIATRGVMLWKEFD 869 (2051)
T ss_dssp HHHHTCCCCCGGGGGGGGTSCCSSEEEEEC--TTSCEEEEECCHHHHHHHHHH
T ss_pred HHHHhCCCCcccchhhccccCcCcEEEEec--cCCCcHHHhccHHHHHHHHhH
Confidence 99999876552 111110 137899999999999998764
No 7
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.97 E-value=1.3e-32 Score=308.50 Aligned_cols=207 Identities=23% Similarity=0.245 Sum_probs=171.0
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCcH---
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPHN--- 77 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~~--- 77 (300)
|+++|| +||||||||++++|+++||+|||||||+|+|+++++.+++.++++|+++|+++ ++||+||++...+..
T Consensus 421 ~~~~lg-~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~ 499 (3089)
T 3zen_D 421 FTRLTG-RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWKL 499 (3089)
T ss_dssp HHHHHS-SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHHH
T ss_pred hhhhcC-CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcChhhhhh
Confidence 789999 99999999996678999999999999999997767779999999999999998 789999999876643
Q ss_pred -----HHHHHHHHcCCc--EEEEcCCCCc----HHHHHHHHHCCCeEee-c-----------------------------
Q 022271 78 -----ENIKAILSEKVA--VLQVSWGEYS----EELVLEAHSAGVKVVP-Q----------------------------- 116 (300)
Q Consensus 78 -----~~~~~~~e~g~~--~i~~~~G~~~----~~~v~~~~~~G~~v~~-~----------------------------- 116 (300)
+.++.++++|++ .|++++|.|+ .++++.+|++|+++++ .
T Consensus 500 ~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~ee~~~~i~~l~~~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~ 579 (3089)
T 3zen_D 500 QVGGKRLVQRARQSGAPIDGLVVSAGIPDLEEAVDIIDELNEVGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGG 579 (3089)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEESSCCCHHHHHHHHTSTTHHHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCS
T ss_pred ccCHHHHHHHHHHcCCCceEEEEeCCCCchhHhHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCC
Confidence 678999999955 5888889975 6788888888887766 2
Q ss_pred --------cChhchHHHHHHhhCC-CCCcEEEccCCCChHHHHHHH-----------HCCCcEEEeccccccCcccCCCH
Q 022271 117 --------DGLISLLPMVVDLIGD-RDIPIIAAGGIVDARGYVAAL-----------SLGAQGICLGTRFVASEESYAHP 176 (300)
Q Consensus 117 --------~~~~~ll~~v~~~~~~-~~iPViaaGGI~~g~~v~aal-----------~lGAdgV~~GT~fl~t~Es~~~~ 176 (300)
..+..+++++.+.++. .++|||++|||+|+++++++| ++|||||||||+|++|.||.+|+
T Consensus 580 eaGGH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea~~s~ 659 (3089)
T 3zen_D 580 RAGGHHSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEATTSP 659 (3089)
T ss_dssp SSSEECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTSCBCH
T ss_pred CcCCCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCcccCCCH
Confidence 1255677444443321 389999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHcCCCc-----------ceEEEecccCCCCCCCceecChhhH
Q 022271 177 EYKRKLVEMDKT-----------EYTDVFGRARWPGAPHRVLQTPFFS 213 (300)
Q Consensus 177 ~~k~~i~~a~~t-----------~~t~~~~~~~~~g~~~R~l~n~~~~ 213 (300)
.||++|++++++ ++....+. .|.|.|.++|++++
T Consensus 660 ~~K~~l~~a~~~~~~~~~g~~a~g~~~~~s~---~g~~~~~~~n~~~~ 704 (3089)
T 3zen_D 660 QVKQLLVETKGTEAWVGAGKAANGMASGRSQ---LGADIHEIDNAASR 704 (3089)
T ss_dssp HHHHHHHHCCCCSSCCCSSSCBTTEEEEECT---TSCEEEEETTTCCH
T ss_pred HHHHHHHhCCCcccccccCCccCCEEEeeec---cCCchHhhhhhhHH
Confidence 999999998773 22333332 36788888886544
No 8
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.96 E-value=1.9e-28 Score=231.86 Aligned_cols=172 Identities=18% Similarity=0.268 Sum_probs=136.2
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcC----CcEE--eeeecC---
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE----RPFG--VGVVLA--- 73 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~----~P~g--vnl~~~--- 73 (300)
|++.+++++|||||||+ ++|+++||+|||++||||+|+. ++++++++++|+++|+.++ +||+ +||+..
T Consensus 35 lt~~l~l~~PIi~a~M~-~Vs~~~lA~Ava~aGGlGvi~~--~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~ 111 (400)
T 3ffs_A 35 LTKNVSLKIPLISSAMD-TVTEHLMAVGMARLGGIGIIHK--NMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTD 111 (400)
T ss_dssp SSSSCEESSSEEECSCT-TTCSSHHHHHHHTTTCEEEECS--SSCHHHHHHHHHHHHCCC--------------------
T ss_pred hhcccCCCCCEEeCCCC-CcCcHHHHHHHHHCCCEEEeCC--CCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCC
Confidence 67889999999999999 8999999999999999999996 5799999999999999876 7998 888611
Q ss_pred ------------CC-------------------cHHHHHHHHHcCCcEEEE--cCCCCc--HHHHHHHHHC-CCeEee-c
Q 022271 74 ------------FP-------------------HNENIKAILSEKVAVLQV--SWGEYS--EELVLEAHSA-GVKVVP-Q 116 (300)
Q Consensus 74 ------------~~-------------------~~~~~~~~~e~g~~~i~~--~~G~~~--~~~v~~~~~~-G~~v~~-~ 116 (300)
.| ..+.++.++++|+++|++ ++|.+. .+.++++++. ++.++. .
T Consensus 112 ~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~ 191 (400)
T 3ffs_A 112 GKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGN 191 (400)
T ss_dssp -----------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEee
Confidence 00 147899999999999987 667643 3566777765 877763 1
Q ss_pred -------------------c------------------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcE
Q 022271 117 -------------------D------------------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQG 159 (300)
Q Consensus 117 -------------------~------------------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdg 159 (300)
. +.+.++++++++++..++|||++|||.+++|++++|++|||+
T Consensus 192 V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~ 271 (400)
T 3ffs_A 192 VVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASS 271 (400)
T ss_dssp ECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSE
T ss_pred cCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCE
Confidence 1 245678888887644479999999999999999999999999
Q ss_pred EEeccccccCcccCCCHH
Q 022271 160 ICLGTRFVASEESYAHPE 177 (300)
Q Consensus 160 V~~GT~fl~t~Es~~~~~ 177 (300)
|+|||+|+.|+||+++..
T Consensus 272 V~vGt~f~~t~Es~~~~~ 289 (400)
T 3ffs_A 272 VMIGSILAGTEESPGEKE 289 (400)
T ss_dssp EEECGGGTTBTTSSCCEE
T ss_pred EEEChHHhcCCCCCchhh
Confidence 999999999999999854
No 9
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.93 E-value=5.5e-25 Score=206.32 Aligned_cols=170 Identities=22% Similarity=0.364 Sum_probs=136.2
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeec--CCCcHHHH
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVL--AFPHNENI 80 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~--~~~~~~~~ 80 (300)
|++.+++++|||++||+ ++|+++||.+++++||+|++.. + ++++++.++++++|+.. ++.||+.. .....+.+
T Consensus 39 lt~~~~l~~Pii~apM~-~vs~~~lA~avA~aGGlg~i~~-~-~s~e~~~~~i~~vk~~~--~l~vga~vg~~~~~~~~~ 113 (366)
T 4fo4_A 39 LTKNIALNIPMVSASMD-TVTEARLAIALAQEGGIGFIHK-N-MSIEQQAAQVHQVKISG--GLRVGAAVGAAPGNEERV 113 (366)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECS-S-SCHHHHHHHHHHHHTTT--SCCCEEECCSCTTCHHHH
T ss_pred cccccccCCCEEeCCCC-CCChHHHHHHHHHcCCceEeec-C-CCHHHHHHHHHHHHhcC--ceeEEEEeccChhHHHHH
Confidence 56788999999999999 8999999999999999999986 3 69999999999999864 44455443 33458899
Q ss_pred HHHHHcCCcEEEE--cCCCCcHHH---HHHHHHC--CCeEeec--------------------c----------------
Q 022271 81 KAILSEKVAVLQV--SWGEYSEEL---VLEAHSA--GVKVVPQ--------------------D---------------- 117 (300)
Q Consensus 81 ~~~~e~g~~~i~~--~~G~~~~~~---v~~~~~~--G~~v~~~--------------------~---------------- 117 (300)
+.++++|+++|++ +.|. ++.+ ++++++. ++.++.. .
T Consensus 114 ~~lieaGvd~I~idta~G~-~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~ 192 (366)
T 4fo4_A 114 KALVEAGVDVLLIDSSHGH-SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGV 192 (366)
T ss_dssp HHHHHTTCSEEEEECSCTT-SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCC
T ss_pred HHHHhCCCCEEEEeCCCCC-CHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCc
Confidence 9999999999987 4454 3433 4456554 6665431 1
Q ss_pred --ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHH
Q 022271 118 --GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEY 178 (300)
Q Consensus 118 --~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~ 178 (300)
+.+.++++++++.+..++|||++|||.++++++++|++|||+|+|||+|+.|+||+.+..+
T Consensus 193 g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~ 255 (366)
T 4fo4_A 193 GVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVIL 255 (366)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEE
T ss_pred ccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhh
Confidence 2345677777654333799999999999999999999999999999999999999998654
No 10
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.91 E-value=5.1e-24 Score=199.80 Aligned_cols=169 Identities=18% Similarity=0.268 Sum_probs=137.7
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHH
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKA 82 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~ 82 (300)
|++.+++++||+++||+ ++++++||.+++++||+|++.. .++++++.++++++|+.++.|+++|+.... .+.++.
T Consensus 38 l~~~~~l~~Pii~apM~-~vt~~~lA~avA~~GGlgii~~--~~s~e~~~~~I~~vk~~~~~pvga~ig~~~--~e~a~~ 112 (361)
T 3khj_A 38 LTKNVSLKIPLISSAMD-TVTEHLMAVGMARLGGIGIIHK--NMDMESQVNEVLKVKNSGGLRVGAAIGVNE--IERAKL 112 (361)
T ss_dssp SSSSCEESSSEEECSST-TTCSHHHHHHHHHTTCEEEECS--SSCHHHHHHHHHHHHHTTCCCCEEEECTTC--HHHHHH
T ss_pred cccccccCCCEEeecCC-CCCcHHHHHHHHHcCCCeEEec--CCCHHHHHHHHHHHHhccCceEEEEeCCCH--HHHHHH
Confidence 56778899999999999 8999999999999999999986 479999999999999988999999997754 788999
Q ss_pred HHHcCCcEEEE--cCCCCc--HHHHHHHHHC-CCeEee-c-------------------------------------cCh
Q 022271 83 ILSEKVAVLQV--SWGEYS--EELVLEAHSA-GVKVVP-Q-------------------------------------DGL 119 (300)
Q Consensus 83 ~~e~g~~~i~~--~~G~~~--~~~v~~~~~~-G~~v~~-~-------------------------------------~~~ 119 (300)
++++++++|.+ +.|.+. .+.++++++. ++.++. . .+.
T Consensus 113 l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~ 192 (361)
T 3khj_A 113 LVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQ 192 (361)
T ss_dssp HHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCH
T ss_pred HHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCc
Confidence 99999999986 345431 1344544443 777664 1 123
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCH
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHP 176 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~ 176 (300)
+..++++.++.+..++|||++|||.+++|+.+++++|||+|++||+|+.++||+.+.
T Consensus 193 ~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~ 249 (361)
T 3khj_A 193 ITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEK 249 (361)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEE
T ss_pred HHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcch
Confidence 445666655432127999999999999999999999999999999999999999764
No 11
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.90 E-value=1.3e-22 Score=193.33 Aligned_cols=239 Identities=17% Similarity=0.254 Sum_probs=159.1
Q ss_pred ccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc---------------------
Q 022271 4 RGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--------------------- 62 (300)
Q Consensus 4 ~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~--------------------- 62 (300)
.+.+++++||+++||+ ++++++|+.+++++|++|+++. +.+++++..++.++++.+
T Consensus 36 ~~g~~l~~Pii~Apm~-~~~~~ela~a~a~aGglg~i~~--~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~ 112 (404)
T 1eep_A 36 TKNISLNIPFLSSAMD-TVTESQMAIAIAKEGGIGIIHK--NMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTA 112 (404)
T ss_dssp SSSCEESSSEEECCCT-TTCSHHHHHHHHHHTSEEEECS--SSCHHHHHHHHHHHHTCC---------------------
T ss_pred cCCcccCCCEEeCCCC-CCCCHHHHHHHHHCCCEEEECC--CCCHHHHHHHHHHHHhhccCCCceecccccccccccccc
Confidence 3345689999999999 7999999999999999999984 479999988888776532
Q ss_pred -----------------CCc-----------EEeeeecCCCcHHHHHHHHHcCCcEEEE--cCCCCc--HHHHHHHHHC-
Q 022271 63 -----------------ERP-----------FGVGVVLAFPHNENIKAILSEKVAVLQV--SWGEYS--EELVLEAHSA- 109 (300)
Q Consensus 63 -----------------~~P-----------~gvnl~~~~~~~~~~~~~~e~g~~~i~~--~~G~~~--~~~v~~~~~~- 109 (300)
+.| +++|+.......+.++.+++.|+++|.+ +.|.|. .++++.+++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~ 192 (404)
T 1eep_A 113 KQHLEKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKY 192 (404)
T ss_dssp -----------------CCTTCCBCTTSCBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHC
Confidence 234 5788765444567788889999999987 456541 3455666665
Q ss_pred -CCeEee-c-------------------c------------------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHH
Q 022271 110 -GVKVVP-Q-------------------D------------------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 150 (300)
Q Consensus 110 -G~~v~~-~-------------------~------------------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~ 150 (300)
++.++. . . +.+..++++.+.++..++|||++|||.+++|+.
T Consensus 193 ~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~ 272 (404)
T 1eep_A 193 PNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVV 272 (404)
T ss_dssp TTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHH
T ss_pred CCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHH
Confidence 767663 1 1 123456677765543479999999999999999
Q ss_pred HHHHCCCcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhhcCCCCcccCCCccc
Q 022271 151 AALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKNIPAHENEVNQPII 230 (300)
Q Consensus 151 aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~~~~~~~~~~~~~~ 230 (300)
+++++|||+|++||+|+.++||+.+..||+- .....+ | |.-.....+ .
T Consensus 273 ~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g-------~~~k~~----~-g~~~~g~~~-------~------------- 320 (404)
T 1eep_A 273 KAIAAGADSVMIGNLFAGTKESPSEEIIYNG-------KKFKSY----V-GMGSISAMK-------R------------- 320 (404)
T ss_dssp HHHHHTCSEEEECHHHHTBTTSSSCEEEETT-------EEEEC-------------------------------------
T ss_pred HHHHcCCCHHhhCHHHhcCCCCCcchhhhCC-------eEEeec----C-CCCCHHHHh-------h-------------
Confidence 9999999999999999999999999988871 101111 0 111000000 0
Q ss_pred ccccccchHHHHHHhhcccccccccCCc-ccceeeccccccccCCCCCHHHHHHHHHHHHHHHHH
Q 022271 231 GRSTIHGIEKKIHRLAGTVPNVTTTGDI-DSMVMFAGEGVGLIREILPAGEVVKQLVEGAQLLVH 294 (300)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~a~~~gd~-~~~~~~aGq~~~~i~~i~~a~eiv~~l~~e~~~~l~ 294 (300)
+ .. ..+..||. +...+..++..++|..+.+++++++.|.+|.+..+.
T Consensus 321 g---------~~--------~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~ 368 (404)
T 1eep_A 321 G---------SK--------SRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMG 368 (404)
T ss_dssp -----------------------------------------CEECCBCHHHHHHHHHHHHHHHHH
T ss_pred c---------cc--------cchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHH
Confidence 0 00 01122332 334456778888999999999999999999888753
No 12
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.87 E-value=1.5e-21 Score=182.58 Aligned_cols=170 Identities=14% Similarity=0.076 Sum_probs=125.4
Q ss_pred cccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHH
Q 022271 5 GMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAIL 84 (300)
Q Consensus 5 ~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~ 84 (300)
+.+++++||+++||+ +.++++||+|++++|++|+++. + .++++..+.+++-.... .++++++-......+.++.++
T Consensus 52 ~~~~l~~PIi~ApM~-~~~~~~lA~Ava~~Gglg~i~~-~-~s~e~~~~~i~~~p~~l-~~v~~~~g~~~~~~~~~~~l~ 127 (351)
T 2c6q_A 52 KQTYSGVPIIAANMD-TVGTFEMAKVLCKFSLFTAVHK-H-YSLVQWQEFAGQNPDCL-EHLAASSGTGSSDFEQLEQIL 127 (351)
T ss_dssp CCEEEECCEEECSST-TTSCHHHHHHHHHTTCEEECCT-T-CCHHHHHHHHHHCGGGC-TTEEEEECSSHHHHHHHHHHH
T ss_pred cCccccCCEEECCCC-CCCcHHHHHHHHHCCCEEEEcC-C-CCHHHHHHHHhhCchhh-heeEeecCCChHHHHHHHHHH
Confidence 467899999999999 7999999999999999999987 4 57877777665422221 356666533222345677777
Q ss_pred Hc--CCcEEEEc--CCCCc--HHHHHHHHHC--CCeEeec--------------------------------------cC
Q 022271 85 SE--KVAVLQVS--WGEYS--EELVLEAHSA--GVKVVPQ--------------------------------------DG 118 (300)
Q Consensus 85 e~--g~~~i~~~--~G~~~--~~~v~~~~~~--G~~v~~~--------------------------------------~~ 118 (300)
+. ++++++++ +|.+. .+.++++++. ++.++.. .+
T Consensus 128 ~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p 207 (351)
T 2c6q_A 128 EAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYP 207 (351)
T ss_dssp HHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCC
T ss_pred hccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCcc
Confidence 77 89988764 45432 2355666554 6665421 01
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHH
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEY 178 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~ 178 (300)
++..++++.++++..++|||++|||.++.|++++|++|||+|+|||+|+.+.||+++..+
T Consensus 208 ~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~ 267 (351)
T 2c6q_A 208 QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIE 267 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEE
T ss_pred HHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhh
Confidence 345667777665323799999999999999999999999999999999999999988743
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.85 E-value=8.8e-21 Score=177.03 Aligned_cols=160 Identities=16% Similarity=0.230 Sum_probs=121.0
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCC
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~ 88 (300)
+++||++|||. ++++++||.|++++|++|+++. +.+++++.+++++.+. ++++++-......+.++.++++|+
T Consensus 41 l~~Pii~ApM~-~vte~~lA~A~a~~Gg~gvi~~--~~s~ee~~~~i~~~~~----~~~~~~g~~~~~~e~~~~a~~aGv 113 (361)
T 3r2g_A 41 LNLPVISANMD-TITESNMANFMHSKGAMGALHR--FMTIEENIQEFKKCKG----PVFVSVGCTENELQRAEALRDAGA 113 (361)
T ss_dssp ESSCEEECCST-TTCSHHHHHHHHHTTCEEBCCS--CSCHHHHHHHHHTCCS----CCBEEECSSHHHHHHHHHHHHTTC
T ss_pred cCCCEEECCCC-CchHHHHHHHHHHcCCCEEEeC--CCCHHHHHHHHhhcce----EEEEEcCCCHHHHHHHHHHHHcCC
Confidence 68999999998 8999999999999999999986 3799988887776543 455554333334678999999999
Q ss_pred cEEEEc--CCCCc--HHHHHHHHHC--CCeEeec------------------------cCh-----------hchHHHHH
Q 022271 89 AVLQVS--WGEYS--EELVLEAHSA--GVKVVPQ------------------------DGL-----------ISLLPMVV 127 (300)
Q Consensus 89 ~~i~~~--~G~~~--~~~v~~~~~~--G~~v~~~------------------------~~~-----------~~ll~~v~ 127 (300)
++|.+. .|.+. .+.++.+++. ++.++.. .+. ...+..+.
T Consensus 114 dvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~ 193 (361)
T 3r2g_A 114 DFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQ 193 (361)
T ss_dssp CEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHH
T ss_pred CEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHH
Confidence 999884 45432 2567777764 6776651 010 11333444
Q ss_pred HhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCH
Q 022271 128 DLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHP 176 (300)
Q Consensus 128 ~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~ 176 (300)
+..+..+ |||++|||.+++|+.++|++|||+|+|||+|+.++||+.+-
T Consensus 194 ~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~ 241 (361)
T 3r2g_A 194 DCSRADR-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEV 241 (361)
T ss_dssp HHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCE
T ss_pred HHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCcee
Confidence 4432112 99999999999999999999999999999999999999873
No 14
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.83 E-value=2.3e-20 Score=173.72 Aligned_cols=164 Identities=19% Similarity=0.243 Sum_probs=126.2
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcC
Q 022271 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g 87 (300)
.+++||+++||+ ++|+++|+++++++|++|++... +++.+++.++++++. +.|+++|+-......+.++.+.+.+
T Consensus 44 ~l~~Pi~~a~ma-g~s~~~la~a~~~~gg~g~~~~~---~~~~~~~~i~~~~~~-g~~v~v~~g~~~~~~~~a~~~~~~g 118 (336)
T 1ypf_A 44 KFKLPVVPANMQ-TIIDERIATYLAENNYFYIMHRF---QPEKRISFIRDMQSR-GLIASISVGVKEDEYEFVQQLAAEH 118 (336)
T ss_dssp EESSSEEECSST-TTCCHHHHHHHHHTTCCCCCCCS---SGGGHHHHHHHHHHT-TCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred EecCcEEECCCC-CCChHHHHHHHHhCCCEEEecCC---CCHHHHHHHHHHHhc-CCeEEEeCCCCHHHHHHHHHHHhcC
Confidence 378999999999 89999999999999999998752 556677778887753 5589999532211235577788888
Q ss_pred --CcEEEEcC--CCCc--HHHHHHHHHC--CCeEeec--------------------c------------------C--h
Q 022271 88 --VAVLQVSW--GEYS--EELVLEAHSA--GVKVVPQ--------------------D------------------G--L 119 (300)
Q Consensus 88 --~~~i~~~~--G~~~--~~~v~~~~~~--G~~v~~~--------------------~------------------~--~ 119 (300)
++++.++. |.+. .+.++++++. +..++.. . + +
T Consensus 119 ~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~ 198 (336)
T 1ypf_A 119 LTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQ 198 (336)
T ss_dssp CCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhH
Confidence 88887643 4432 3556666553 4544421 0 1 5
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHH
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYK 179 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k 179 (300)
+.+++++++++ ++|||++|||.++.|+.++|++|||+|++||+|+.|.||+++..+|
T Consensus 199 ~~~l~~v~~~~---~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~ 255 (336)
T 1ypf_A 199 LAALRWCAKAA---SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEK 255 (336)
T ss_dssp HHHHHHHHHTC---SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC--
T ss_pred HHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeee
Confidence 77888998887 7999999999999999999999999999999999999999998776
No 15
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.74 E-value=3.6e-17 Score=159.38 Aligned_cols=173 Identities=20% Similarity=0.331 Sum_probs=127.0
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc--------------------
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-------------------- 62 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~-------------------- 62 (300)
|++.+++++||+++||. .+|..+|+.++++.||+|+|+. + +++++..+++++++...
T Consensus 36 lt~~i~l~iPivsa~Md-tVTe~~ma~a~a~~GGiGvI~~-n-~s~e~qa~~V~~Vk~~~~~m~~d~v~v~~~~tv~ea~ 112 (496)
T 4fxs_A 36 LTKNIALNIPMVSASMD-TVTEARLAIALAQEGGIGFIHK-N-MSIEQQAAQVHQVKIFEAGVVTHPVTVRPEQTIADVM 112 (496)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHHTCEEEECS-S-SCHHHHHHHHHHHHHCCC--CBCCCCBCSSSBHHHHH
T ss_pred eccccccCCCceecCcc-hhhHHHHHHHHHHcCCcceecC-C-CCHHHHHHHHHhccccccccccCceEECCCCCHHHHH
Confidence 67788899999999998 8999999999999999999986 4 68888888888775421
Q ss_pred -----------------CCcEEe------------------------eee------------------------------
Q 022271 63 -----------------ERPFGV------------------------GVV------------------------------ 71 (300)
Q Consensus 63 -----------------~~P~gv------------------------nl~------------------------------ 71 (300)
++++|+ +++
T Consensus 113 ~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G 192 (496)
T 4fxs_A 113 ELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEF 192 (496)
T ss_dssp HHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTS
T ss_pred HHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 011111 000
Q ss_pred ------c-----------------------------CCCcHHHHHHHHHcCCcEEEEcCCCC-cH---HHHHHHHHC--C
Q 022271 72 ------L-----------------------------AFPHNENIKAILSEKVAVLQVSWGEY-SE---ELVLEAHSA--G 110 (300)
Q Consensus 72 ------~-----------------------------~~~~~~~~~~~~e~g~~~i~~~~G~~-~~---~~v~~~~~~--G 110 (300)
. .....+.++.+++.|+++|.+....+ ++ +.++++++. +
T Consensus 193 ~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~ 272 (496)
T 4fxs_A 193 QLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPH 272 (496)
T ss_dssp BCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTT
T ss_pred CEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCC
Confidence 0 00125678889999999998865432 12 444444442 3
Q ss_pred CeEeec--------------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHH
Q 022271 111 VKVVPQ--------------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 152 (300)
Q Consensus 111 ~~v~~~--------------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aa 152 (300)
+.++.. .+.+.++++++++++..++|||++|||.+++|++++
T Consensus 273 ~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~ka 352 (496)
T 4fxs_A 273 LEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKA 352 (496)
T ss_dssp CCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred ceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHH
Confidence 333221 134567888888764347999999999999999999
Q ss_pred HHCCCcEEEeccccccCcccCCCHHH
Q 022271 153 LSLGAQGICLGTRFVASEESYAHPEY 178 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~Es~~~~~~ 178 (300)
+++|||+|++||+|+.|.||+.+..+
T Consensus 353 la~GAd~V~iGs~f~~t~Espg~~~~ 378 (496)
T 4fxs_A 353 IAAGASCVMVGSMFAGTEEAPGEVIL 378 (496)
T ss_dssp HHTTCSEEEESTTTTTBTTSSSCCEE
T ss_pred HHcCCCeEEecHHHhcCCCCCcceee
Confidence 99999999999999999999887433
No 16
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.72 E-value=1.7e-16 Score=155.21 Aligned_cols=170 Identities=19% Similarity=0.309 Sum_probs=122.1
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh---------------------
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL--------------------- 61 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~--------------------- 61 (300)
|++.+++++||+++||. .++..+|+.+++++||+|+|.. + ++.++..+++++++..
T Consensus 60 lt~~i~l~iPivsa~Md-tvTe~~lAia~a~~GgiGvIh~-~-~~~~~q~~~V~~V~~~~~~m~~d~v~l~~~~tv~ea~ 136 (511)
T 3usb_A 60 LSESLQLNIPLISAGMD-TVTEADMAIAMARQGGLGIIHK-N-MSIEQQAEQVDKVKRSESGVISDPFFLTPEHQVYDAE 136 (511)
T ss_dssp EETTEEESSSEEECSCT-TTCSHHHHHHHHHHTCEEEECS-S-SCHHHHHHHHHHHHTSSSCSSSSCCCBCTTSBHHHHH
T ss_pred eecccccCCCccccCch-hhcHHHHHHHHHhcCCceeecc-c-CCHHHHHHHHHHhhccccccccCCEEECCCCCHHHHH
Confidence 67889999999999998 8999999999999999999986 3 5666666666666542
Q ss_pred ------------------cCCcEEe-----------------------eeec----------------------------
Q 022271 62 ------------------TERPFGV-----------------------GVVL---------------------------- 72 (300)
Q Consensus 62 ------------------~~~P~gv-----------------------nl~~---------------------------- 72 (300)
.++++|+ +++.
T Consensus 137 ~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~ 216 (511)
T 3usb_A 137 HLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNN 216 (511)
T ss_dssp HHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTT
T ss_pred HHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCC
Confidence 1122222 1000
Q ss_pred -------------------------------------CCCcHHHHHHHHHcCCcEEEEcCCCC-c---HHHHHHHHHC--
Q 022271 73 -------------------------------------AFPHNENIKAILSEKVAVLQVSWGEY-S---EELVLEAHSA-- 109 (300)
Q Consensus 73 -------------------------------------~~~~~~~~~~~~e~g~~~i~~~~G~~-~---~~~v~~~~~~-- 109 (300)
.....+.++.++++|+++|++....+ + .+.++++++.
T Consensus 217 g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~ 296 (511)
T 3usb_A 217 GVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYP 296 (511)
T ss_dssp SBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT
T ss_pred CCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCC
Confidence 00013557778889999998854322 1 2344444432
Q ss_pred CCeEeec--------------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHH
Q 022271 110 GVKVVPQ--------------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVA 151 (300)
Q Consensus 110 G~~v~~~--------------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~a 151 (300)
+..++.. .+.+..+++++++++..++|||++|||.++.|+++
T Consensus 297 ~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k 376 (511)
T 3usb_A 297 SLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVK 376 (511)
T ss_dssp TSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH
T ss_pred CceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHH
Confidence 3343321 23466777877766444799999999999999999
Q ss_pred HHHCCCcEEEeccccccCcccCCC
Q 022271 152 ALSLGAQGICLGTRFVASEESYAH 175 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t~Es~~~ 175 (300)
++++|||+|++||+|+.+.||+..
T Consensus 377 ala~GA~~V~vGs~~~~~~es~g~ 400 (511)
T 3usb_A 377 ALAAGAHVVMLGSMFAGVAESPGE 400 (511)
T ss_dssp HHHTTCSEEEESTTTTTBTTSSSC
T ss_pred HHHhCchhheecHHHhcCccCchh
Confidence 999999999999999999999877
No 17
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.72 E-value=2.5e-16 Score=149.39 Aligned_cols=167 Identities=20% Similarity=0.263 Sum_probs=112.9
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCC----CCCHHHHHHHHHHHHhhc---------------------
Q 022271 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD----WEAPDYLRDLIRKTRSLT--------------------- 62 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~----~~~~~~l~~~i~~~r~~~--------------------- 62 (300)
.+++||+++||+ +++.++++.+++++|++|+++..+ +..++...+++.++++.+
T Consensus 65 ~l~~Pii~Apm~-g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~ 143 (393)
T 2qr6_A 65 KFDLPFMNHPSD-ALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTEL 143 (393)
T ss_dssp EESSSEEECCCT-TTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred ccCCCeEeCCCC-CcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHH
Confidence 378999999999 899999999999999999998621 224444444444443321
Q ss_pred -----------CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC-------CCC---cHH--------------------
Q 022271 63 -----------ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-------GEY---SEE-------------------- 101 (300)
Q Consensus 63 -----------~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~-------G~~---~~~-------------------- 101 (300)
+.|+.+++... ...+..+.+.+.+++++.++. +.+ ..+
T Consensus 144 ~~~~i~~~~~~g~~v~~~v~~~-~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~t~ 222 (393)
T 2qr6_A 144 LSERIAQVRDSGEIVAVRVSPQ-NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIAGGVNDY 222 (393)
T ss_dssp HHHHHHHHHHTTSCCEEEECTT-THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEEECCCSH
T ss_pred HHHHHHHHhhcCCeEEEEeCCc-cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEECCcCCH
Confidence 33454544332 234556666778888887641 111 111
Q ss_pred -HHHHHHHCCCeEeec--------------cChhchHHHHHHh-------hCCCCCcEEEccCCCChHHHHHHHHCCCcE
Q 022271 102 -LVLEAHSAGVKVVPQ--------------DGLISLLPMVVDL-------IGDRDIPIIAAGGIVDARGYVAALSLGAQG 159 (300)
Q Consensus 102 -~v~~~~~~G~~v~~~--------------~~~~~ll~~v~~~-------~~~~~iPViaaGGI~~g~~v~aal~lGAdg 159 (300)
.+..+.+.|+..+.. .+++..+++++++ +...++|||++|||.++.|+.++|++|||+
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~ 302 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADA 302 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCE
Confidence 122222333332211 2456778888877 521129999999999999999999999999
Q ss_pred EEeccccccCcccCCCH
Q 022271 160 ICLGTRFVASEESYAHP 176 (300)
Q Consensus 160 V~~GT~fl~t~Es~~~~ 176 (300)
|++||+|+.+.||+.+.
T Consensus 303 V~iG~~~l~~~es~~~~ 319 (393)
T 2qr6_A 303 VVLGSPLARAEEAAGKG 319 (393)
T ss_dssp EEECGGGGGSTTCTTTT
T ss_pred EEECHHHHcCCCCCCce
Confidence 99999999999998874
No 18
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.71 E-value=8.1e-17 Score=156.72 Aligned_cols=56 Identities=16% Similarity=0.317 Sum_probs=49.6
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL 61 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~ 61 (300)
|++.+++++||+++||. +++.++|+.+++++|++|++.. + +++++.+++|+++++.
T Consensus 40 lt~~l~l~~PIi~a~m~-~vt~~ela~ava~~GglG~i~~-~-~~~e~~~~~I~~v~~~ 95 (486)
T 2cu0_A 40 ITPNVKLNIPILSAAMD-TVTEWEMAVAMAREGGLGVIHR-N-MGIEEQVEQVKRVKRA 95 (486)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECS-S-SCHHHHHHHHHHHHTC
T ss_pred ecCCcccccceEEccce-eecHHHHHHHHHhcCCceeecC-C-CCHHHHHHHHHhhcch
Confidence 57889999999999998 8999999999999999999986 3 6888888888887653
No 19
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.71 E-value=3e-16 Score=152.73 Aligned_cols=172 Identities=23% Similarity=0.341 Sum_probs=125.5
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcC----Cc-------------
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTE----RP------------- 65 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~----~P------------- 65 (300)
|++.+++++|++++||. .++..+|+.++++.||+|+|.. + +++++..+++++++...+ .|
T Consensus 35 lt~~i~l~iPivsa~M~-tVTe~~lA~ala~~GGiGvI~~-~-~~~e~~a~~v~~vk~~~~~m~~~~v~v~~~~tv~ea~ 111 (490)
T 4avf_A 35 LTRGIELNIPLVSAAMD-TVTEARLAIAMAQEGGIGIIHK-N-MGIEQQAAEVRKVKKHETAIVRDPVTVTPSTKIIELL 111 (490)
T ss_dssp EETTEEESSSEEECSCT-TTCSHHHHHHHHHHTSEEEECC-S-SCHHHHHHHHHHHHHCCC-------------------
T ss_pred cccCcccCCCccccchh-hhCHHHHHHHHHHcCCCccccC-C-CCHHHHHHHhhhhcccccCcccCceEeCCCCcHHHHH
Confidence 67778899999999998 8999999999999999999986 3 688888888877754211 00
Q ss_pred -------------------EEe------------------------eeec------------------------------
Q 022271 66 -------------------FGV------------------------GVVL------------------------------ 72 (300)
Q Consensus 66 -------------------~gv------------------------nl~~------------------------------ 72 (300)
+|+ |++.
T Consensus 112 ~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~ 191 (490)
T 4avf_A 112 QMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFY 191 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCc
Confidence 000 0000
Q ss_pred -----------------------------------CCCcHHHHHHHHHcCCcEEEEcCCCC-cH---HHHHHHHHC--CC
Q 022271 73 -----------------------------------AFPHNENIKAILSEKVAVLQVSWGEY-SE---ELVLEAHSA--GV 111 (300)
Q Consensus 73 -----------------------------------~~~~~~~~~~~~e~g~~~i~~~~G~~-~~---~~v~~~~~~--G~ 111 (300)
.....+.++.+++.|+++|.+....+ +. +.++++++. ++
T Consensus 192 lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~ 271 (490)
T 4avf_A 192 LRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDV 271 (490)
T ss_dssp ---------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTS
T ss_pred EEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCc
Confidence 00014667888899999998754322 22 445555442 44
Q ss_pred eEeec--------------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH
Q 022271 112 KVVPQ--------------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 153 (300)
Q Consensus 112 ~v~~~--------------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal 153 (300)
.++.. .+.+.++++++++++..++|||++|||.+++|+++++
T Consensus 272 ~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal 351 (490)
T 4avf_A 272 QVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAM 351 (490)
T ss_dssp EEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH
T ss_pred eEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHH
Confidence 44321 1255678888887754579999999999999999999
Q ss_pred HCCCcEEEeccccccCcccCCCHH
Q 022271 154 SLGAQGICLGTRFVASEESYAHPE 177 (300)
Q Consensus 154 ~lGAdgV~~GT~fl~t~Es~~~~~ 177 (300)
++|||+|++||+|+.+.||+.+..
T Consensus 352 ~~GAd~V~vGs~~~~~~Esp~~~~ 375 (490)
T 4avf_A 352 VAGAYCVMMGSMFAGTEEAPGEIE 375 (490)
T ss_dssp HHTCSEEEECTTTTTBTTSSSCEE
T ss_pred HcCCCeeeecHHHhcCCCCCCceE
Confidence 999999999999999999998743
No 20
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.65 E-value=9.5e-16 Score=149.42 Aligned_cols=107 Identities=22% Similarity=0.306 Sum_probs=80.2
Q ss_pred HHHHHHHHHcCCcEEEEc--CCCC--cHHHHHHHHHC--CCeEeec----------------------------------
Q 022271 77 NENIKAILSEKVAVLQVS--WGEY--SEELVLEAHSA--GVKVVPQ---------------------------------- 116 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~--~G~~--~~~~v~~~~~~--G~~v~~~---------------------------------- 116 (300)
.+.++.+++.|+++|.++ .|.+ ..+.++++++. +..++..
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~ 318 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVV 318 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCcccccccc
Confidence 356778888999999874 3543 23445555543 4444311
Q ss_pred ----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHH
Q 022271 117 ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 183 (300)
Q Consensus 117 ----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~ 183 (300)
.+.+..++++.+.++..++|||++|||.++.|+.+++++|||+|++||+|+.++||+.+..||+.+.
T Consensus 319 ~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~ 389 (494)
T 1vrd_A 319 AGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRK 389 (494)
T ss_dssp HCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEE
T ss_pred CCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEE
Confidence 1345567777776543379999999999999999999999999999999999999999998887553
No 21
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.65 E-value=1.8e-15 Score=147.27 Aligned_cols=56 Identities=23% Similarity=0.430 Sum_probs=50.2
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL 61 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~ 61 (300)
|++.|++++||+++||. ++|.++|+.+++++|++|++.. + +++++.+++|+++++.
T Consensus 37 lt~~l~~~~Piv~a~M~-~vt~~eLa~av~~~Gg~G~i~~-~-~~~e~~~~~i~~v~~~ 92 (491)
T 1zfj_A 37 LADNLTLNIPIITAAMD-TVTGSKMAIAIARAGGLGVIHK-N-MSITEQAEEVRKVKRS 92 (491)
T ss_dssp EETTEEESSSEEECCCT-TTCSHHHHHHHHHTTCEEEECC-S-SCHHHHHHHHHHHHHH
T ss_pred hhhcceecCceEecCch-hccHHHHHHHHHHcCCceEEeC-C-CCHHHHHHHHHHHhhH
Confidence 67889999999999999 8999999999999999999976 3 6999999999888653
No 22
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.63 E-value=5e-15 Score=142.80 Aligned_cols=57 Identities=28% Similarity=0.365 Sum_probs=50.0
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCC
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 175 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~ 175 (300)
.++.+-++.++.++.++||||.|||.+..|+++||++|||.||||+.|..|.||+..
T Consensus 369 Q~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe 425 (556)
T 4af0_A 369 QGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGE 425 (556)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSC
T ss_pred HHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCc
Confidence 456666677666545799999999999999999999999999999999999999864
No 23
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.59 E-value=9.9e-15 Score=136.35 Aligned_cols=158 Identities=14% Similarity=0.080 Sum_probs=115.5
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHH-HHHHHH--hhcCCcEEeeeecCCCc--HHHHHHH
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRD-LIRKTR--SLTERPFGVGVVLAFPH--NENIKAI 83 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~-~i~~~r--~~~~~P~gvnl~~~~~~--~~~~~~~ 83 (300)
+++||++|||+ |+|+..++..+.+.|++|++.++ +.+++.+.. .-+++. ...+.|+++||....+. .+.++.+
T Consensus 2 l~nriv~APM~-g~td~~~r~~~r~~Gg~gli~te-~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a 79 (350)
T 3b0p_A 2 LDPRLSVAPMV-DRTDRHFRFLVRQVSLGVRLYTE-MTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIG 79 (350)
T ss_dssp CCCSEEECCCT-TTSSHHHHHHHHHHCSSSBEECC-CEEHHHHHHSCHHHHHCCCGGGCSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEECCCC-CCCHHHHHHHHHHcCCCCEEEeC-CEEechhhcCCHHHHhccCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 57999999998 89999999999999999999874 566665422 111222 23568999999976542 4556777
Q ss_pred HHcCCcEEEEcCCCCcH-------------------HHHHHHHH-CCCeEee----------------------------
Q 022271 84 LSEKVAVLQVSWGEYSE-------------------ELVLEAHS-AGVKVVP---------------------------- 115 (300)
Q Consensus 84 ~e~g~~~i~~~~G~~~~-------------------~~v~~~~~-~G~~v~~---------------------------- 115 (300)
.+.|++.|.+++|+|.. ++++.+++ .++.|..
T Consensus 80 ~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d 159 (350)
T 3b0p_A 80 EAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVK 159 (350)
T ss_dssp HHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCC
T ss_pred HHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCC
Confidence 78899999998887632 22333332 2444332
Q ss_pred ---cc------------------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 116 ---QD------------------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 116 ---~~------------------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.. ..+.++.++++.+. ++|||++|||.|++++.+++. |||+|++|+.|+..++
T Consensus 160 ~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~--~iPVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~ 233 (350)
T 3b0p_A 160 VFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP--QLTFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPF 233 (350)
T ss_dssp EEEEECSCBC----------CCCCCHHHHHHHHHHCT--TSEEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGG
T ss_pred EEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC--CCeEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcH
Confidence 10 02456777777652 699999999999999999998 9999999999998765
No 24
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.58 E-value=6.1e-14 Score=137.30 Aligned_cols=101 Identities=23% Similarity=0.303 Sum_probs=75.4
Q ss_pred HHHHHHHHHcCCcEEEE--cCCCCc--HHHHHHHHHC--CCeEeec--------------------c----C--------
Q 022271 77 NENIKAILSEKVAVLQV--SWGEYS--EELVLEAHSA--GVKVVPQ--------------------D----G-------- 118 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~--~~G~~~--~~~v~~~~~~--G~~v~~~--------------------~----~-------- 118 (300)
.+.++.+++.|+++|.+ ++|.+. .++++.+++. ++.++.. . +
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~ 336 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEV 336 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCC
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccc
Confidence 45667888999999997 456542 3667777765 7776531 0 1
Q ss_pred ---------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHH
Q 022271 119 ---------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 180 (300)
Q Consensus 119 ---------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~ 180 (300)
.+.+++++++.+ ++|||++|||.++.|+.+++++|||+|+|||+|+.++|++.+..||+
T Consensus 337 ~~~g~~~~~~~~~~~~~~~~~---~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~ 404 (514)
T 1jcn_A 337 MACGRPQGTAVYKVAEYARRF---GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSD 404 (514)
T ss_dssp CSCCCCHHHHHHHHHHHHGGG---TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC-----
T ss_pred cCCCccchhHHHHHHHHHhhC---CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeEC
Confidence 134556666655 79999999999999999999999999999999999999999999986
No 25
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.56 E-value=1.1e-14 Score=154.23 Aligned_cols=167 Identities=13% Similarity=0.062 Sum_probs=117.3
Q ss_pred ccCCccceecCCCCCCCCc----HHHHHHHHhCCceEEecCCCCCCHHHHHH------------------------HHHH
Q 022271 6 MLGFEYGIVQAPLGPDISG----PELVAAVANAGGLGLLRAPDWEAPDYLRD------------------------LIRK 57 (300)
Q Consensus 6 ~lg~~~Pii~apM~~g~s~----~~la~avs~aGglG~i~~~~~~~~~~l~~------------------------~i~~ 57 (300)
.++|++||+++||++|..+ ..||.+++++|+++.++.+ ..+|+.++. .+..
T Consensus 863 ~~~I~~Pfii~aMS~GslS~ea~~aLA~Aas~aGg~~~tGeG-g~~pe~~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~ 941 (1520)
T 1ofd_A 863 VESIVKRFCTGGMSLGALSREAHETLAIAMNRLGAKSNSGEG-GEDVVRYLTLDDVDSEGNSPTLPHLHGLQNGDTANSA 941 (1520)
T ss_dssp HHHHHTTEECCCBCTTTSCHHHHHHHHHHHHHHTCBCEECTT-CCCGGGGSCCCCCCTTSCCTTSTTCCSCCTTCCCCCS
T ss_pred cccccCceEecCcCcccccHHHHHHHHHHHHHcCCceEeCCC-CCCHHHHHhhhccccccccccccccccccCcchHHHH
Confidence 3578999999999976444 3999999999999999985 568877642 2234
Q ss_pred HHhhcCCcEEeeee----------------------------------------------cCCCc------H---HHHHH
Q 022271 58 TRSLTERPFGVGVV----------------------------------------------LAFPH------N---ENIKA 82 (300)
Q Consensus 58 ~r~~~~~P~gvnl~----------------------------------------------~~~~~------~---~~~~~ 82 (300)
+++++++|||||+. .+.++ + +.++.
T Consensus 942 I~Ql~sg~FGVn~~~l~~ad~IeIKi~QGAKpG~GG~Lp~~kV~~~iA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~ 1021 (1520)
T 1ofd_A 942 IKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYD 1021 (1520)
T ss_dssp EEEECTTCTTCCHHHHHHCSEEEEECCCTTSTTSCCEECGGGCCHHHHHHHTSCTTCCEECCSSCTTCSSHHHHHHHHHH
T ss_pred HHHhcCCCCccChhhccchHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHcCCCCCCCeeCCCCCcCcCCHHHHHHHHHH
Confidence 56667778887632 11111 1 33444
Q ss_pred HHHc--CCcEEEEcCC-CCcHHHHHHHHHCCCeEeec-------------------cChhchHHHHHHhhCC----CCCc
Q 022271 83 ILSE--KVAVLQVSWG-EYSEELVLEAHSAGVKVVPQ-------------------DGLISLLPMVVDLIGD----RDIP 136 (300)
Q Consensus 83 ~~e~--g~~~i~~~~G-~~~~~~v~~~~~~G~~v~~~-------------------~~~~~ll~~v~~~~~~----~~iP 136 (300)
+.+. +++++..-.+ .........+.++|+..+.. .+++.+|+++.+++.. .++|
T Consensus 1022 Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~Ip 1101 (1520)
T 1ofd_A 1022 LHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVL 1101 (1520)
T ss_dssp HHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCE
T ss_pred HHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCce
Confidence 5554 4565543221 11233445566777776543 2467788999887621 2699
Q ss_pred EEEccCCCChHHHHHHHHCCCcEEEeccccccCcccC
Q 022271 137 IIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESY 173 (300)
Q Consensus 137 ViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~ 173 (300)
||++|||.|++|+++++++||++|++||+|+.+.+|.
T Consensus 1102 VIAdGGIrtG~DVakALaLGAdaV~iGTafL~algc~ 1138 (1520)
T 1ofd_A 1102 LRADGGLKTGWDVVMAALMGAEEYGFGSIAMIAEGCI 1138 (1520)
T ss_dssp EEEESSCCSHHHHHHHHHTTCSEEECSHHHHHHTTCC
T ss_pred EEEECCCCCHHHHHHHHHcCCCeeEEcHHHHHHHHHH
Confidence 9999999999999999999999999999999988764
No 26
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.55 E-value=1.6e-14 Score=152.86 Aligned_cols=166 Identities=16% Similarity=0.153 Sum_probs=114.0
Q ss_pred cCCccceecCCCCCCCCcH----HHHHHHHhCCceEEecCCCCCCHHHHH------HHHHHHHhhcCCcEEeee------
Q 022271 7 LGFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAPDWEAPDYLR------DLIRKTRSLTERPFGVGV------ 70 (300)
Q Consensus 7 lg~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~~~~~~~~l~------~~i~~~r~~~~~P~gvnl------ 70 (300)
.+|++|++++||++|..++ .||.+++++|+++.++.+ ..+++.++ +.+..+|+.+++|||||+
T Consensus 847 ~~I~~Pf~isaMS~GalS~ea~~aLA~Aa~~aGg~~~tGeG-g~~pe~~~~~~~g~~~~~~IrQ~asg~FGVn~~~l~~a 925 (1479)
T 1ea0_A 847 TAIRKRFITPGMSMGALSPEAHGTLNVAMNRIGAKSDSGEG-GEDPARFRPDKNGDNWNSAIKQVASGRFGVTAEYLNQC 925 (1479)
T ss_dssp HHHHTTEEEEECCBTTBCHHHHHHHHHHHHHTTCEEECCTT-CCCGGGSSBCTTSCBCCCSEEEECSSCTTCCHHHHTSC
T ss_pred ccccCCeEecCccccccCHHHHHHHHHHHHHcCCeeEcCCC-ccCHHHhhhccccchhhhhhhhhcCCCCCcChHHcccc
Confidence 3678999999999774444 999999999999999875 46776553 133345555555666553
Q ss_pred ----------------------------------------ecCCCc------H---HHHHHHHHc--CCcEEEEcCC-CC
Q 022271 71 ----------------------------------------VLAFPH------N---ENIKAILSE--KVAVLQVSWG-EY 98 (300)
Q Consensus 71 ----------------------------------------~~~~~~------~---~~~~~~~e~--g~~~i~~~~G-~~ 98 (300)
+.+.++ + +.++.+.+. +++++..-.+ ..
T Consensus 926 ~~ieIKigQGAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~g 1005 (1479)
T 1ea0_A 926 RELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSG 1005 (1479)
T ss_dssp SEEEEECCCTTSTTTCCEECGGGCCHHHHHHHTCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTT
T ss_pred chHHHHHhccCCCCcCCCCCHHHHHHHHHHHcCCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCC
Confidence 222111 2 234444444 4555543221 11
Q ss_pred cHHHHHHHHHCCCeEeec-------------------cChhchHHHHHHhhCC----CCCcEEEccCCCChHHHHHHHHC
Q 022271 99 SEELVLEAHSAGVKVVPQ-------------------DGLISLLPMVVDLIGD----RDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~-------------------~~~~~ll~~v~~~~~~----~~iPViaaGGI~~g~~v~aal~l 155 (300)
.......+.++|+..+.. .+++.+|+++.+++.. .++|||++|||.|++|+++++++
T Consensus 1006 i~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaL 1085 (1479)
T 1ea0_A 1006 IGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAML 1085 (1479)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHc
Confidence 233445566777766543 2466789999987631 26999999999999999999999
Q ss_pred CCcEEEeccccccCcccC
Q 022271 156 GAQGICLGTRFVASEESY 173 (300)
Q Consensus 156 GAdgV~~GT~fl~t~Es~ 173 (300)
||++|++||+|+.+.+|.
T Consensus 1086 GAdaV~iGTafL~a~gc~ 1103 (1479)
T 1ea0_A 1086 GAEEFGIGTASLIAMGCI 1103 (1479)
T ss_dssp TCSEEECCHHHHHHHTCC
T ss_pred CCCeeeEcHHHHHHHHHH
Confidence 999999999999988764
No 27
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.51 E-value=1.7e-13 Score=120.59 Aligned_cols=134 Identities=14% Similarity=0.198 Sum_probs=104.4
Q ss_pred cHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCc-EEeeee-------cCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERP-FGVGVV-------LAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P-~gvnl~-------~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
-.+||.+++++|+.|+... ++ +.|+++|+.++.| ||++.- .-.++.+.++.+.+.|+++|.+..
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~----~~----~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~ 109 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRIE----GI----ENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDA 109 (229)
T ss_dssp HHHHHHHHHHTTCSEEEEE----SH----HHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHCCCcEEEEC----CH----HHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECc
Confidence 3699999999999997652 33 4789999999999 666642 223456778899999999998754
Q ss_pred C---CC--cHHHHHHHHHCCCeEeec--------------------------------cChhchHHHHHHhhCCCCCcEE
Q 022271 96 G---EY--SEELVLEAHSAGVKVVPQ--------------------------------DGLISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 96 G---~~--~~~~v~~~~~~G~~v~~~--------------------------------~~~~~ll~~v~~~~~~~~iPVi 138 (300)
. .| ..++++.+++.|..++.. ...+.+++++++. ++|||
T Consensus 110 ~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~----~ipvI 185 (229)
T 3q58_A 110 SFRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA----GCRVI 185 (229)
T ss_dssp CSSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT----TCCEE
T ss_pred cccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc----CCCEE
Confidence 3 22 367888888888887754 0134566666653 69999
Q ss_pred EccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+.|||.|++++.+++.+|||||++||+|+.+
T Consensus 186 A~GGI~t~~d~~~~~~~GadgV~VGsai~~p 216 (229)
T 3q58_A 186 AEGRYNTPALAANAIEHGAWAVTVGSAITRI 216 (229)
T ss_dssp EESSCCSHHHHHHHHHTTCSEEEECHHHHCH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEchHhcCh
Confidence 9999999999999999999999999999863
No 28
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.50 E-value=3.3e-13 Score=131.80 Aligned_cols=61 Identities=33% Similarity=0.324 Sum_probs=51.9
Q ss_pred ChhchHHHHHHhhCCC------CCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHH
Q 022271 118 GLISLLPMVVDLIGDR------DIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEY 178 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~------~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~ 178 (300)
+++..++++.+++++. ++|||++|||.++.|+++||++|||+|+|||+|+.+.||+.+..+
T Consensus 330 p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~ 396 (503)
T 1me8_A 330 GQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVT 396 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEE
T ss_pred chHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEE
Confidence 3556778887765321 599999999999999999999999999999999999999977643
No 29
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.49 E-value=3.2e-13 Score=119.11 Aligned_cols=145 Identities=21% Similarity=0.251 Sum_probs=108.4
Q ss_pred cHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCc-EEeeee-------cCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERP-FGVGVV-------LAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P-~gvnl~-------~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
..++|.++.++|+.|+... ++ +.|+++|+.++.| +|+|.. .-.++.+.++.+.+.|+++|.+..
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~----~~----~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~ 109 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRIE----GI----DNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDG 109 (232)
T ss_dssp HHHHHHHHHHTTCSEEEEE----SH----HHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEC----CH----HHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECc
Confidence 3699999999999997642 33 5789999999999 555432 122456778899999999998754
Q ss_pred C---CC--cHHHHHHHHHCCCeEeec--------------------------------cChhchHHHHHHhhCCCCCcEE
Q 022271 96 G---EY--SEELVLEAHSAGVKVVPQ--------------------------------DGLISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 96 G---~~--~~~~v~~~~~~G~~v~~~--------------------------------~~~~~ll~~v~~~~~~~~iPVi 138 (300)
. .| ..++++.+++.|..++.. ...+.+++++++. ++|||
T Consensus 110 ~~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~----~ipvI 185 (232)
T 3igs_A 110 TARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA----GCRVI 185 (232)
T ss_dssp CSSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT----TCCEE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc----CCcEE
Confidence 3 22 357888888888777654 0134567777664 69999
Q ss_pred EccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHH
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKL 182 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i 182 (300)
+.|||.|++++.+++.+|||||++||+|+...+ ....|++.+
T Consensus 186 A~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~--~~~~~~~~i 227 (232)
T 3igs_A 186 AEGRYNSPALAAEAIRYGAWAVTVGSAITRLEH--ICGWYNDAL 227 (232)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEECHHHHCHHH--HHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEehHhcCHHH--HHHHHHHHH
Confidence 999999999999999999999999999986322 334455444
No 30
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.46 E-value=3e-13 Score=124.63 Aligned_cols=155 Identities=14% Similarity=0.144 Sum_probs=106.2
Q ss_pred CCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHH----HHHHHHHhhcCCcEEeeeecCCCc--HHHHH
Q 022271 8 GFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLR----DLIRKTRSLTERPFGVGVVLAFPH--NENIK 81 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~----~~i~~~r~~~~~P~gvnl~~~~~~--~~~~~ 81 (300)
.++.||++|||+ ++|+..+...+++.|+ |++.++ +.+++.+. +.++.+....+.|+++||....+. .+.++
T Consensus 2 ~l~nri~~APM~-~~t~~~~r~~~~~~G~-gli~te-~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~g~~~~~~~~aa~ 78 (318)
T 1vhn_A 2 SLEVKVGLAPMA-GYTDSAFRTLAFEWGA-DFAFSE-MVSAKGFLMNSQKTEELLPQPHERNVAVQIFGSEPNELSEAAR 78 (318)
T ss_dssp ---CEEEECCCT-TTCSHHHHHHHHTTTC-CCEECS-CEEHHHHHTTCHHHHHHSCCTTCTTEEEEEECSCHHHHHHHHH
T ss_pred ccCCCEEECCCC-CCCcHHHHHHHHHHCc-CEEEeC-CEEEcccccCCHhHHHhhhCcCCCeEEEEeCCCCHHHHHHHHH
Confidence 468999999999 8999999999888875 888764 45554332 123333334578999999965442 34566
Q ss_pred HHHHcCCcEEEEcCCCCcH-------------------HHHHHHHH-CCCeEeec-------------------------
Q 022271 82 AILSEKVAVLQVSWGEYSE-------------------ELVLEAHS-AGVKVVPQ------------------------- 116 (300)
Q Consensus 82 ~~~e~g~~~i~~~~G~~~~-------------------~~v~~~~~-~G~~v~~~------------------------- 116 (300)
.+.+. .+.|.+++|+|.. ++++.+++ .+..|...
T Consensus 79 ~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i 157 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEV 157 (318)
T ss_dssp HHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEE
T ss_pred HHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEE
Confidence 66677 9999998887632 23444443 34444322
Q ss_pred -------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH-CCCcEEEeccccccCcc
Q 022271 117 -------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 -------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~-lGAdgV~~GT~fl~t~E 171 (300)
...+.+++++ +. ++|||++|||.|++|+.+++. .|||+|++|+.|+..++
T Consensus 158 ~v~g~~~~~~~~~~~~~~~i~~i----~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~ 221 (318)
T 1vhn_A 158 FIHTRTVVQSFTGRAEWKALSVL----EK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPW 221 (318)
T ss_dssp EEESSCTTTTTSSCCCGGGGGGS----CC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTT
T ss_pred EEcCCCccccCCCCcCHHHHHHH----Hc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcc
Confidence 0112222222 22 699999999999999999999 79999999999998754
No 31
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.46 E-value=6.8e-14 Score=128.04 Aligned_cols=153 Identities=18% Similarity=0.184 Sum_probs=98.4
Q ss_pred ceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHH-HHHHHHh-hcCCcEEeeeecCCCc--HHHHHHHHH-c
Q 022271 12 GIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRD-LIRKTRS-LTERPFGVGVVLAFPH--NENIKAILS-E 86 (300)
Q Consensus 12 Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~-~i~~~r~-~~~~P~gvnl~~~~~~--~~~~~~~~e-~ 86 (300)
++.++||+ |.+.|+|+ ++++|+++.++.. ..+++.+.+ .++++|+ .++.|+++|+....+. .+.++.+.+ .
T Consensus 49 si~~~p~~-g~~~p~l~--~~~~g~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~ 124 (311)
T 1ep3_A 49 ATTLHPRF-GNPTPRVA--ETASGMLNAIGLQ-NPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAA 124 (311)
T ss_dssp EECSSCBC-CCCSCCEE--EETTEEEECCCCC-BCCHHHHHHTHHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHTTST
T ss_pred eeccCccC-CCCCCeEE--ECCcccccccCCC-CcCHHHHHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHhccC
Confidence 33444443 34444443 2344444444442 356676644 4667776 5589999999876432 344555555 7
Q ss_pred CCcEEEEcCCCCc---------------HHHHHHHHHC-CCeEeec-------------------------cC-------
Q 022271 87 KVAVLQVSWGEYS---------------EELVLEAHSA-GVKVVPQ-------------------------DG------- 118 (300)
Q Consensus 87 g~~~i~~~~G~~~---------------~~~v~~~~~~-G~~v~~~-------------------------~~------- 118 (300)
+++.|.+++++|. .++++.+++. +..++.. .+
T Consensus 125 g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i 204 (311)
T 1ep3_A 125 NVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRF 204 (311)
T ss_dssp TEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCB
T ss_pred CCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCccccc
Confidence 8999988766431 3455555544 5544321 00
Q ss_pred ---h---------------------hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 ---L---------------------ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ---~---------------------~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
+ +.++.++++.+ ++|||++|||.|++++.+++.+|||+|++||+|+..++
T Consensus 205 ~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~---~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~ 278 (311)
T 1ep3_A 205 DLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV---DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFADPF 278 (311)
T ss_dssp CTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC---SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHHHCTT
T ss_pred CcccCCccccCCCCcccCccchHHHHHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHHcCcH
Confidence 0 24455666555 79999999999999999999999999999999999655
No 32
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.46 E-value=9e-13 Score=123.76 Aligned_cols=159 Identities=17% Similarity=0.242 Sum_probs=106.5
Q ss_pred cccC--CccceecCCCCC-CCC----cHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-
Q 022271 5 GMLG--FEYGIVQAPLGP-DIS----GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH- 76 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~-g~s----~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~- 76 (300)
+++| ++.||+.+||+. |.+ ...++.++.++|...+++.....+.++ +.+.. .+.|+.++|+.+...
T Consensus 73 ~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~----v~~~~--~~~~~~~QLy~~~d~~ 146 (368)
T 2nli_A 73 EILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEE----ISEGL--NGGPRWFQIYMAKDDQ 146 (368)
T ss_dssp EETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHH----HHHHH--TTCCEEEEECCBSSHH
T ss_pred EECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHH----HHHhC--CCCCEEEEEeccCCHH
Confidence 4566 578999999971 234 358999999999877777532123332 22211 356888888764322
Q ss_pred --HHHHHHHHHcCCcEEEEcCCCCc----------------------------------------------HHHHHHHHH
Q 022271 77 --NENIKAILSEKVAVLQVSWGEYS----------------------------------------------EELVLEAHS 108 (300)
Q Consensus 77 --~~~~~~~~e~g~~~i~~~~G~~~----------------------------------------------~~~v~~~~~ 108 (300)
.+.++.+.+.|++++.++.++|. .+.++.+++
T Consensus 147 ~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~ 226 (368)
T 2nli_A 147 QNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAG 226 (368)
T ss_dssp HHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHH
Confidence 35566666777777766555431 112233332
Q ss_pred -CCCeEeec--------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 109 -AGVKVVPQ--------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 109 -~G~~v~~~--------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
.++.++.. .+++.+++++++++.+ ++|||++|||.++.|+.++|++
T Consensus 227 ~~~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~-~ipVia~GGI~~g~D~~kalal 305 (368)
T 2nli_A 227 HSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNK-RVPIVFDSGVRRGEHVAKALAS 305 (368)
T ss_dssp HSSSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHHHT
T ss_pred HcCCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHc
Confidence 23333211 2467889999998842 6999999999999999999999
Q ss_pred CCcEEEeccccccCc
Q 022271 156 GAQGICLGTRFVASE 170 (300)
Q Consensus 156 GAdgV~~GT~fl~t~ 170 (300)
|||+|++|++|+...
T Consensus 306 GAd~V~iGr~~l~~~ 320 (368)
T 2nli_A 306 GADVVALGRPVLFGL 320 (368)
T ss_dssp TCSEEEECHHHHHHH
T ss_pred CCCEEEECHHHHHHH
Confidence 999999999999874
No 33
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.42 E-value=7.6e-13 Score=123.82 Aligned_cols=56 Identities=23% Similarity=0.299 Sum_probs=45.2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCH
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHP 176 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~ 176 (300)
+...++++.. +. .++|||++|||.++.|++++|++|||+|++||+|+....+...+
T Consensus 265 t~~~L~~v~~-~~-~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~ 320 (365)
T 3sr7_A 265 TAQVLLNAQP-LM-DKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVH 320 (365)
T ss_dssp HHHHHHHHGG-GT-TTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHH
T ss_pred HHHHHHHHHH-hc-CCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChH
Confidence 4456676643 32 26999999999999999999999999999999999876554443
No 34
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.42 E-value=1.8e-12 Score=122.61 Aligned_cols=54 Identities=24% Similarity=0.460 Sum_probs=48.0
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCccc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEES 172 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es 172 (300)
+++..++++++++.. ++|||++|||.++.|+.++|++|||+|++|++|+....+
T Consensus 292 ~~~~~l~~v~~av~~-~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~ 345 (392)
T 2nzl_A 292 ATIDVLPEIVEAVEG-KVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF 345 (392)
T ss_dssp CHHHHHHHHHHHHTT-SSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-CCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh
Confidence 367889999998842 599999999999999999999999999999999987543
No 35
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.37 E-value=5.4e-12 Score=117.24 Aligned_cols=52 Identities=29% Similarity=0.387 Sum_probs=46.9
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++.+++++++++.. ++|||++|||.++.|+.++|++|||+|++||+|+...
T Consensus 257 ~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l 308 (352)
T 3sgz_A 257 ASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGL 308 (352)
T ss_dssp CHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHH
T ss_pred cHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHH
Confidence 467899999998853 6999999999999999999999999999999999753
No 36
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.35 E-value=1.5e-11 Score=115.28 Aligned_cols=50 Identities=20% Similarity=0.197 Sum_probs=43.8
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+...++++++++. ++|||++|||.++.|+.++|++|||+|++||+|+.+.
T Consensus 254 t~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~~ 303 (368)
T 3vkj_A 254 TAASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKSA 303 (368)
T ss_dssp HHHHHHHHHHHST--TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcC--CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHH
Confidence 3356778888773 5999999999999999999999999999999999754
No 37
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.34 E-value=1.3e-11 Score=120.37 Aligned_cols=62 Identities=23% Similarity=0.489 Sum_probs=50.8
Q ss_pred hhchHHHHHHhhCC----CCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHH
Q 022271 119 LISLLPMVVDLIGD----RDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 180 (300)
Q Consensus 119 ~~~ll~~v~~~~~~----~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~ 180 (300)
.+.+++++++++.. .++|||++|||.++.|+.++|++|||+|++|++|+....+...+..++
T Consensus 384 ~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~ 449 (511)
T 1kbi_A 384 PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEK 449 (511)
T ss_dssp HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHH
Confidence 56789999988731 269999999999999999999999999999999999765443333333
No 38
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.34 E-value=1.3e-11 Score=115.10 Aligned_cols=165 Identities=16% Similarity=0.091 Sum_probs=102.4
Q ss_pred cccC--CccceecCCCCCCCC-------cHHHHHHHHhCCceEEecCCC--CCCHHHHHHHHHHHHh-hcCCcEEeeeec
Q 022271 5 GMLG--FEYGIVQAPLGPDIS-------GPELVAAVANAGGLGLLRAPD--WEAPDYLRDLIRKTRS-LTERPFGVGVVL 72 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s-------~~~la~avs~aGglG~i~~~~--~~~~~~l~~~i~~~r~-~~~~P~gvnl~~ 72 (300)
+++| ++.|++.|||+ |.+ +..++.++.++|..-.++... ..+++. ....+.+++ ..+.|+.+|+..
T Consensus 48 ~i~g~~~~~P~~iApm~-g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~pv~~~i~~ 125 (349)
T 1p0k_A 48 KIGELSSSSPIFINAMT-GGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSE-RLSYEIVRKENPNGLIFANLGS 125 (349)
T ss_dssp EETTEEESCSEEEECCC-CSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTTTTCHHH-HHHHHHHHHHCSSSCEEEEEET
T ss_pred EECCcccCCceEEcCcc-ccchhhhhHHHHHHHHHHHHcCCcEEeccchhcccCccc-ccceehhhhhCCCceeEEeecC
Confidence 4456 56899999998 788 668899988888433343311 112221 222233333 247899888874
Q ss_pred CCCcHHHHHHHHHcCCcEEEEcCCCCc--------------HHHHHHHHH-CCCeEeec---------------------
Q 022271 73 AFPHNENIKAILSEKVAVLQVSWGEYS--------------EELVLEAHS-AGVKVVPQ--------------------- 116 (300)
Q Consensus 73 ~~~~~~~~~~~~e~g~~~i~~~~G~~~--------------~~~v~~~~~-~G~~v~~~--------------------- 116 (300)
....+...+.+.+.+++.|.++.++|. .+.++++++ .++.++..
T Consensus 126 ~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~ 205 (349)
T 1p0k_A 126 EATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAA 205 (349)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSE
T ss_pred CCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCE
Confidence 333333334444556777665544321 133444432 23333210
Q ss_pred ---c---------------------------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 117 ---D---------------------------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 117 ---~---------------------------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
. ++...++++++.+ .++|||+.|||.+++|+.+++++|||+|++||+|
T Consensus 206 I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~ 283 (349)
T 1p0k_A 206 VDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF--PASTMIASGGLQDALDVAKAIALGASCTGMAGHF 283 (349)
T ss_dssp EEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc--CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHH
Confidence 0 1122466666655 2799999999999999999999999999999999
Q ss_pred ccCcccC
Q 022271 167 VASEESY 173 (300)
Q Consensus 167 l~t~Es~ 173 (300)
+...++.
T Consensus 284 l~~~~~~ 290 (349)
T 1p0k_A 284 LKALTDS 290 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 9987643
No 39
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.28 E-value=4.6e-11 Score=112.23 Aligned_cols=51 Identities=33% Similarity=0.487 Sum_probs=45.2
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+++..++++++.+.+ ++|||+.|||.++.|+.+++++|||+|++|++|+..
T Consensus 265 ~~~~~l~~v~~~~~~-~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 265 ATIMALEEVVKAAQG-RIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFS 315 (370)
T ss_dssp CHHHHHHHHHHHTTT-SSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred cHHHHHHHHHHHhCC-CCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHH
Confidence 356678899888742 699999999999999999999999999999999975
No 40
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.27 E-value=3.8e-11 Score=104.57 Aligned_cols=142 Identities=17% Similarity=0.302 Sum_probs=105.0
Q ss_pred cCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecC---------CCcHHHHHHHHH
Q 022271 15 QAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLA---------FPHNENIKAILS 85 (300)
Q Consensus 15 ~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~---------~~~~~~~~~~~e 85 (300)
..||....+..+++.++.++|+.++... ++ +.++++|+.++.|+ ++++.. .++.+.++.+.+
T Consensus 16 ~~p~~~~~~~~~~a~~~~~~Ga~~i~~~----~~----~~i~~i~~~~~~pv-~~~~~~~~~~~~~~i~~~~~~i~~~~~ 86 (223)
T 1y0e_A 16 DEPLHSSFIMSKMALAAYEGGAVGIRAN----TK----EDILAIKETVDLPV-IGIVKRDYDHSDVFITATSKEVDELIE 86 (223)
T ss_dssp TSTTCCHHHHHHHHHHHHHHTCSEEEEE----SH----HHHHHHHHHCCSCE-EEECBCCCTTCCCCBSCSHHHHHHHHH
T ss_pred CCCCCCCccHHHHHHHHHHCCCeeeccC----CH----HHHHHHHHhcCCCE-EeeeccCCCccccccCCcHHHHHHHHh
Confidence 3588733567899999999999887542 44 45788888899998 433221 134678889999
Q ss_pred cCCcEEEEcCCC---C---cHHHHHHHHHC--CCeEeec----------------------c-----------C--hhch
Q 022271 86 EKVAVLQVSWGE---Y---SEELVLEAHSA--GVKVVPQ----------------------D-----------G--LISL 122 (300)
Q Consensus 86 ~g~~~i~~~~G~---~---~~~~v~~~~~~--G~~v~~~----------------------~-----------~--~~~l 122 (300)
.|++.|.++... | ..++++.+++. |..++.. . . .+.+
T Consensus 87 ~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~ 166 (223)
T 1y0e_A 87 SQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQF 166 (223)
T ss_dssp HTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHH
T ss_pred CCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHH
Confidence 999999876532 2 24677777776 6666432 0 0 1235
Q ss_pred HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 123 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 123 l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
++++++.+ ++||++.|||.|++++.+++.+|||+|++||+|+.
T Consensus 167 ~~~~~~~~---~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~ 209 (223)
T 1y0e_A 167 LKDVLQSV---DAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITR 209 (223)
T ss_dssp HHHHHHHC---CSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HHHHHhhC---CCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcC
Confidence 66777665 79999999999999999999999999999999775
No 41
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.17 E-value=4.4e-10 Score=105.93 Aligned_cols=86 Identities=20% Similarity=0.198 Sum_probs=62.5
Q ss_pred HHHHHHH-cCCcEEEEcCCCCcHHHHHHHHHCCCeEeec-----------cChhchHHHHHHhhCCCCCcEEEccCCCCh
Q 022271 79 NIKAILS-EKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-----------DGLISLLPMVVDLIGDRDIPIIAAGGIVDA 146 (300)
Q Consensus 79 ~~~~~~e-~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-----------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g 146 (300)
.++.+.+ .+.+++.... ...+.+..+.++|+..+.. .+++.+++++++.+ ++|||++|||.++
T Consensus 216 ~i~~i~~~~~~Pv~vkgv--~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~---~~pVia~GGI~~~ 290 (380)
T 1p4c_A 216 ALRWLRDLWPHKLLVKGL--LSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT---GKPVLIDSGFRRG 290 (380)
T ss_dssp HHHHHHHHCCSEEEEEEE--CCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH---CSCEEECSSCCSH
T ss_pred HHHHHHHhcCCCEEEEec--CcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc---CCeEEEECCCCCH
Confidence 3444433 2455554322 2344566666666655432 23578999999998 6799999999999
Q ss_pred HHHHHHHHCCCcEEEeccccccC
Q 022271 147 RGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.|+.++|++|||+|++|++|+..
T Consensus 291 ~dv~kal~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 291 SDIVKALALGAEAVLLGRATLYG 313 (380)
T ss_dssp HHHHHHHHTTCSCEEESHHHHHH
T ss_pred HHHHHHHHhCCcHhhehHHHHHH
Confidence 99999999999999999999864
No 42
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.16 E-value=1.6e-10 Score=107.02 Aligned_cols=116 Identities=18% Similarity=0.114 Sum_probs=81.7
Q ss_pred HHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC-CCCcHHHHHHHHHC---CCeEe--eccChhchHHH
Q 022271 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW-GEYSEELVLEAHSA---GVKVV--PQDGLISLLPM 125 (300)
Q Consensus 52 ~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~-G~~~~~~v~~~~~~---G~~v~--~~~~~~~ll~~ 125 (300)
.+.++++|+ ++.|+.++.+.+....+.++.+.+.|++.|.++. |......++..+.. +-..+ ...+++..+++
T Consensus 171 ~~~i~~vr~-~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~ 249 (332)
T 1vcf_A 171 VERLAELLP-LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILE 249 (332)
T ss_dssp HHHHHHHCS-CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHH
T ss_pred HHHHHHHHc-CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHH
Confidence 456777788 8889999865443456678888899999998853 21111112211110 00000 11457788899
Q ss_pred HHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 126 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 126 v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++++. ++|||++|||.++.|+.++|++|||+|++||+|+.+.
T Consensus 250 v~~~~~--~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~l~~~ 292 (332)
T 1vcf_A 250 VREVLP--HLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHCS--SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred HHHhcC--CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHHHHHH
Confidence 998874 6999999999999999999999999999999999765
No 43
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.13 E-value=9.8e-10 Score=100.55 Aligned_cols=157 Identities=17% Similarity=0.165 Sum_probs=103.6
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEecCCC--------CC--------------------CHHHHHHHHHHHHh
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD--------WE--------------------APDYLRDLIRKTRS 60 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~--------~~--------------------~~~~l~~~i~~~r~ 60 (300)
++.||+.|+.. .-.+.++...+.+.| +|++-... .. ..+.+.+.+++.++
T Consensus 11 l~npv~~Aag~-~~~~~~~~~~~~~~G-~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 88 (311)
T 1jub_A 11 FANPFMNASGV-HCMTIEDLEELKASQ-AGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQK 88 (311)
T ss_dssp ESSSEEECTTS-SCSSHHHHHHHHHSS-CSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHH
T ss_pred cCCCcEECCCC-CCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHH
Confidence 57899999632 123788888877765 56653211 00 13555566666554
Q ss_pred hc--CCcEEeeeecCCC--cHHHHHHHHHcCCc-EEEEcCCCCc--------------HHHHHHHHHC-CCeEeec----
Q 022271 61 LT--ERPFGVGVVLAFP--HNENIKAILSEKVA-VLQVSWGEYS--------------EELVLEAHSA-GVKVVPQ---- 116 (300)
Q Consensus 61 ~~--~~P~gvnl~~~~~--~~~~~~~~~e~g~~-~i~~~~G~~~--------------~~~v~~~~~~-G~~v~~~---- 116 (300)
.. +.|+++|+....+ +.+.++.+.+.+++ +|.+++++|. .++++.+++. +..++..
T Consensus 89 ~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 89 ENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp HTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred hcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 45 7899999986543 24567778888999 9998876431 2344444432 3333211
Q ss_pred -----------------------c----------------------------C------hhchHHHHHHhhCCCCCcEEE
Q 022271 117 -----------------------D----------------------------G------LISLLPMVVDLIGDRDIPIIA 139 (300)
Q Consensus 117 -----------------------~----------------------------~------~~~ll~~v~~~~~~~~iPVia 139 (300)
. + .+.+++++++.+. .++|||+
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~-~~ipvi~ 247 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLK-PEIQIIG 247 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSC-TTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcC-CCCCEEE
Confidence 0 0 1234555555542 1699999
Q ss_pred ccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 140 AGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 140 aGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
.|||.|++|+.+++.+|||+|++||+|+.
T Consensus 248 ~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 99999999999999999999999999998
No 44
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.10 E-value=9.4e-10 Score=115.75 Aligned_cols=160 Identities=13% Similarity=0.183 Sum_probs=110.5
Q ss_pred cccCC--ccceecCCCCCCCCcHHHHHHHHhCCceEEecC----------CCC---------------------------
Q 022271 5 GMLGF--EYGIVQAPLGPDISGPELVAAVANAGGLGLLRA----------PDW--------------------------- 45 (300)
Q Consensus 5 ~~lg~--~~Pii~apM~~g~s~~~la~avs~aGglG~i~~----------~~~--------------------------- 45 (300)
+++|+ +.||+.|||. +..+.+++....++| +|++.. ++.
T Consensus 536 ~~~G~~~~nPv~lAa~~-~~~~~~~~~~~~~~g-~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~ 613 (1025)
T 1gte_A 536 EMAGLKFINPFGLASAA-PTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELI 613 (1025)
T ss_dssp EETTEEESSSEEECSSG-GGSSHHHHHHHHHHT-CSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCS
T ss_pred eeccccccCcccccCCC-CCCCHHHHHHHHHCC-cCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccc
Confidence 34554 5899999998 577788888877765 444321 000
Q ss_pred --CCHHHHHHHHHHHHhhc-CCcEEeeeecCCC---cHHHHHHHHHcCCcEEEEcCCCCc------------------HH
Q 022271 46 --EAPDYLRDLIRKTRSLT-ERPFGVGVVLAFP---HNENIKAILSEKVAVLQVSWGEYS------------------EE 101 (300)
Q Consensus 46 --~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~---~~~~~~~~~e~g~~~i~~~~G~~~------------------~~ 101 (300)
...+.+.+.++++++.. +.|+++|++.... +.+.++.+.+.++++|.+++++|. .+
T Consensus 614 ~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~ 693 (1025)
T 1gte_A 614 SEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRN 693 (1025)
T ss_dssp CSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHH
T ss_pred cchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHH
Confidence 12345556677777755 7899999975432 245667777889999999887652 13
Q ss_pred HHHHHHHC-CCeEeec------------------------c--------------------------------C--h---
Q 022271 102 LVLEAHSA-GVKVVPQ------------------------D--------------------------------G--L--- 119 (300)
Q Consensus 102 ~v~~~~~~-G~~v~~~------------------------~--------------------------------~--~--- 119 (300)
+++.+++. ++.++.. . + .
T Consensus 694 iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~ 773 (1025)
T 1gte_A 694 ICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPI 773 (1025)
T ss_dssp HHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHH
T ss_pred HHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhH
Confidence 44444432 3333321 0 0 0
Q ss_pred -hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 120 -ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 120 -~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
+.+++++++.+. ++|||+.|||.|++|+.++|++|||+|++||+|+.
T Consensus 774 ~~~~v~~v~~~~~--~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 774 ALRAVTTIARALP--GFPILATGGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp HHHHHHHHHHHST--TCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHHHcC--CCCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 245777777762 69999999999999999999999999999999997
No 45
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.09 E-value=6.9e-10 Score=101.70 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=100.7
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEecCC--------------------------CCC--CHHHHHHHHHHHHh
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP--------------------------DWE--APDYLRDLIRKTRS 60 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~--------------------------~~~--~~~~l~~~i~~~r~ 60 (300)
++.||+.+++. .-.+.++.....+.| +|++..+ ++. ..+.+.+.+++.+.
T Consensus 13 l~nPi~~Aag~-~~~~~~~~~~~~~~G-~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 90 (314)
T 2e6f_A 13 FANPFMNAAGV-LCSTEEDLRCMTASS-SGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHD 90 (314)
T ss_dssp ESSSEEECTTS-SCSSHHHHHHHHHSS-CSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCC
T ss_pred cCCCcEECCCC-CCCCHHHHHHHHHCC-CCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhh
Confidence 68899999864 123577777766655 5654221 111 13444444444333
Q ss_pred hcCCcEEeeeecCCC--cHHHHHHHHHcCCc---EEEEcCCCCc--------------HHHH------------------
Q 022271 61 LTERPFGVGVVLAFP--HNENIKAILSEKVA---VLQVSWGEYS--------------EELV------------------ 103 (300)
Q Consensus 61 ~~~~P~gvnl~~~~~--~~~~~~~~~e~g~~---~i~~~~G~~~--------------~~~v------------------ 103 (300)
..+.|+++|+....+ +.+.++.+.+.+++ +|.+++++|. .+++
T Consensus 91 ~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 91 YSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred cCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 357899999986443 24456667777788 7877765431 1222
Q ss_pred ----------HHHHHCC-CeEeecc----------------------------C------hhchHHHHHHhhCCCCCcEE
Q 022271 104 ----------LEAHSAG-VKVVPQD----------------------------G------LISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 104 ----------~~~~~~G-~~v~~~~----------------------------~------~~~ll~~v~~~~~~~~iPVi 138 (300)
+.+.++| +..+... + .+.++.++++.+ .++|||
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~--~~ipvi 248 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC--PDKLVF 248 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC--TTSEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc--CCCCEE
Confidence 2334456 4433210 0 135666777765 279999
Q ss_pred EccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
+.|||.|++|+.+++.+|||+|++||+|+.
T Consensus 249 ~~GGI~~~~da~~~l~~GAd~V~ig~~~l~ 278 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHILAGASMVQVGTALQE 278 (314)
T ss_dssp EESSCCSHHHHHHHHHHTCSSEEECHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEchhhHh
Confidence 999999999999999999999999999997
No 46
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.03 E-value=8.2e-09 Score=90.45 Aligned_cols=133 Identities=17% Similarity=0.286 Sum_probs=95.0
Q ss_pred CcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeec---------CCCcHHHHHHHHHcCCcEEEE
Q 022271 23 SGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVL---------AFPHNENIKAILSEKVAVLQV 93 (300)
Q Consensus 23 s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~---------~~~~~~~~~~~~e~g~~~i~~ 93 (300)
...+++.++.++|+.++... ++ +.++++|+.++.|+ +++.. -.+..+.++.+.+.|++.|.+
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~----~~----~~i~~i~~~~~~p~-i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l 107 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRAN----SV----RDIKEIQAITDLPI-IGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAM 107 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEE----SH----HHHHHHHTTCCSCE-EEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEE
T ss_pred hHHHHHHHHHHCCCcEeecC----CH----HHHHHHHHhCCCCE-EeeEcCCCCccccccCChHHHHHHHHHcCCCEEEE
Confidence 34789999999998876432 44 35888899999998 32221 113467899999999999987
Q ss_pred cCCC---C----cHHHHHHHHHC--CCeEeec-----------------c---------C-------hhchHHHHHHhhC
Q 022271 94 SWGE---Y----SEELVLEAHSA--GVKVVPQ-----------------D---------G-------LISLLPMVVDLIG 131 (300)
Q Consensus 94 ~~G~---~----~~~~v~~~~~~--G~~v~~~-----------------~---------~-------~~~ll~~v~~~~~ 131 (300)
+... | ..++++.+++. +..++.. . + .+.++.++++.
T Consensus 108 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-- 185 (234)
T 1yxy_A 108 DCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-- 185 (234)
T ss_dssp ECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT--
T ss_pred cccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC--
Confidence 5421 1 24667666654 5554422 1 0 12345555443
Q ss_pred CCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 132 DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 132 ~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
++||++.|||.|.+++.+++.+|||+|++||+|+.
T Consensus 186 --~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 186 --GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp --TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred --CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 69999999999999999999999999999999876
No 47
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.99 E-value=4.1e-09 Score=94.55 Aligned_cols=122 Identities=18% Similarity=0.195 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHhh-cCCcEEeeeecC----CCcHHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCCCeEeec-
Q 022271 46 EAPDYLRDLIRKTRSL-TERPFGVGVVLA----FPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQ- 116 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~-~~~P~gvnl~~~----~~~~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G~~v~~~- 116 (300)
.+.+.+.+.++++|+. ++.|+.+-...+ ...+..++.+.+.|++.+.+. ..|+ .++++.++++|+..+..
T Consensus 77 ~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~-Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIA-DVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeC-CCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 3556677889999987 788976522211 234778999999999998886 4443 46777888889876532
Q ss_pred ----------------------------c--------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEE
Q 022271 117 ----------------------------D--------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 160 (300)
Q Consensus 117 ----------------------------~--------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV 160 (300)
. ....++.++++.. ++||++.|||++++++.+++..|||||
T Consensus 156 aP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~---~~pv~vGfGI~~~e~~~~~~~~gADgv 232 (267)
T 3vnd_A 156 PPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN---APPPLLGFGIAEPEQVRAAIKAGAAGA 232 (267)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT---CCCEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 0 1234566666655 799999999999999999999999999
Q ss_pred EeccccccCcc
Q 022271 161 CLGTRFVASEE 171 (300)
Q Consensus 161 ~~GT~fl~t~E 171 (300)
++||+|+-.-|
T Consensus 233 VVGSaiv~~i~ 243 (267)
T 3vnd_A 233 ISGSAVVKIIE 243 (267)
T ss_dssp EECHHHHHHHH
T ss_pred EECHHHHHHHH
Confidence 99999987654
No 48
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.97 E-value=3.8e-09 Score=94.94 Aligned_cols=121 Identities=22% Similarity=0.289 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHhh-cCCcEEe----eeecCCCcHHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCCCeEeec--
Q 022271 47 APDYLRDLIRKTRSL-TERPFGV----GVVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQ-- 116 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~-~~~P~gv----nl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G~~v~~~-- 116 (300)
+.+.+.+.++++|+. .+.|+.+ |.+.....+..++.+.+.|++.+.+. ..|+ .++.+.++++|+..+..
T Consensus 80 ~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-Dlp~ee~~~~~~~~~~~gl~~I~lva 158 (271)
T 3nav_A 80 TPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA-DVPTNESQPFVAAAEKFGIQPIFIAP 158 (271)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHHcCCeEEEEEC
Confidence 455677789999986 7889876 22223345778999999999998875 4553 46777778888875532
Q ss_pred ---------------------------cC--------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEE
Q 022271 117 ---------------------------DG--------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 161 (300)
Q Consensus 117 ---------------------------~~--------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~ 161 (300)
.| ...++.++++.. ++||++.+||++++++.+++..|||||+
T Consensus 159 p~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~~~~~~~~gADgvI 235 (271)
T 3nav_A 159 PTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD---APPALLGFGISEPAQVKQAIEAGAAGAI 235 (271)
T ss_dssp TTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT---CCCEEECSSCCSHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 01 234667777665 7999999999999999999999999999
Q ss_pred eccccccCcc
Q 022271 162 LGTRFVASEE 171 (300)
Q Consensus 162 ~GT~fl~t~E 171 (300)
+||+|+-.-|
T Consensus 236 VGSAiv~~i~ 245 (271)
T 3nav_A 236 SGSAVVKIIE 245 (271)
T ss_dssp ESHHHHHHHH
T ss_pred ECHHHHHHHH
Confidence 9999987654
No 49
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.94 E-value=1.4e-08 Score=89.65 Aligned_cols=132 Identities=14% Similarity=0.155 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHh-hcCCcEEeeeecCC------Cc----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEe
Q 022271 46 EAPDYLRDLIRKTRS-LTERPFGVGVVLAF------PH----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVV 114 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~-~~~~P~gvnl~~~~------~~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~ 114 (300)
.+.++--..-+-.|+ +.+.. .|+|-... |+ .+..+.+.+.|..++-.-.. .....+++.+.|...+
T Consensus 84 ~ta~eAv~~a~lare~~~~~~-~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d--d~~~akrl~~~G~~aV 160 (265)
T 1wv2_A 84 YDAVEAVRTCRLARELLDGHN-LVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD--DPIIARQLAEIGCIAV 160 (265)
T ss_dssp CSHHHHHHHHHHHHTTTTSCC-EEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS--CHHHHHHHHHSCCSEE
T ss_pred CCHHHHHHHHHHHHHHcCCCC-eEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC--CHHHHHHHHHhCCCEE
Confidence 455544444445566 33332 46664431 11 23455666668887743222 3456777777777655
Q ss_pred ec----------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCC--CHHHHHHH
Q 022271 115 PQ----------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA--HPEYKRKL 182 (300)
Q Consensus 115 ~~----------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~--~~~~k~~i 182 (300)
-. ..++.+++++++.. ++|||++|||.+++|++.++.+|||||++||++..+ |++. ...|++++
T Consensus 161 mPlg~pIGsG~Gi~~~~lI~~I~e~~---~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~~a-~dP~~ma~af~~Av 236 (265)
T 1wv2_A 161 MPLAGLIGSGLGICNPYNLRIILEEA---KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHA-KDPVMMAEAMKHAI 236 (265)
T ss_dssp EECSSSTTCCCCCSCHHHHHHHHHHC---SSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHHTS-SSHHHHHHHHHHHH
T ss_pred EeCCccCCCCCCcCCHHHHHHHHhcC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHhCC-CCHHHHHHHHHHHH
Confidence 32 23577899999876 899999999999999999999999999999999843 4443 56677776
Q ss_pred Hc
Q 022271 183 VE 184 (300)
Q Consensus 183 ~~ 184 (300)
..
T Consensus 237 ~a 238 (265)
T 1wv2_A 237 VA 238 (265)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 50
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.93 E-value=4.7e-09 Score=97.13 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHhhc---------CCcEEeeeecCCCc---HHHHHHHHHcCCcEEEEcCCCCcHHHHHH---HHHCCC
Q 022271 47 APDYLRDLIRKTRSLT---------ERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYSEELVLE---AHSAGV 111 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~---------~~P~gvnl~~~~~~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~---~~~~G~ 111 (300)
+++.+.+.++++|+.+ +.|+.|++...... .+.++.+.+.|++.|.++.+....+.... ..+.|.
T Consensus 186 ~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 186 YGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred CHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 4677788899998876 89999998754332 34578888999999998743211100000 011222
Q ss_pred eEeec--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 112 KVVPQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 112 ~v~~~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
..... ...+.+++++++.+.+ ++|||+.|||.|++|+.+++++|||+|++||+|+.
T Consensus 266 ~~g~~~~~~~~~~i~~i~~~~~~-~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 266 LSGRPLQLKSTEIIRRLSLELNG-RLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHTT-SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cCCchhHHHHHHHHHHHHHHhCC-CCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 22210 1135678888888742 69999999999999999999999999999999998
No 51
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.90 E-value=1.8e-09 Score=102.15 Aligned_cols=123 Identities=17% Similarity=0.199 Sum_probs=88.3
Q ss_pred CCHHHHHHHHHHHHhh--------------------cCCc-EEeeeecCCCc---HHHHHHHHHcCCcEEEEcCCCCcHH
Q 022271 46 EAPDYLRDLIRKTRSL--------------------TERP-FGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYSEE 101 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~--------------------~~~P-~gvnl~~~~~~---~~~~~~~~e~g~~~i~~~~G~~~~~ 101 (300)
.+++.+.+.++.+++. .++| +.|++.+.... .+.++.+.+.|++.|+++.....+.
T Consensus 231 q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~ 310 (415)
T 3i65_A 231 QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIN 310 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCC
T ss_pred cCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccc
Confidence 4678888888888764 2689 89999876653 4567888899999998873221110
Q ss_pred HHHHH-HHCCCeEeec--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 102 LVLEA-HSAGVKVVPQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 102 ~v~~~-~~~G~~v~~~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.++.. .+.|...... ...+.+++++++++.. ++|||+.|||.|++|+.+++.+|||+||+||+|+.-
T Consensus 311 dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~-~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~ 380 (415)
T 3i65_A 311 DIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN 380 (415)
T ss_dssp CCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT-CSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH
T ss_pred cccccccccCCcCCccchHHHHHHHHHHHHHhCC-CCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc
Confidence 01111 1234433321 1245788999988742 699999999999999999999999999999999864
No 52
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.88 E-value=6e-09 Score=93.05 Aligned_cols=122 Identities=18% Similarity=0.186 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeec-------
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ------- 116 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~------- 116 (300)
+++...+.++++|+.++.|+.++...+......++.+.+.|++.|.+. ..+ ..+++..+++.|+..+..
T Consensus 78 ~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~-d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~ 156 (262)
T 1rd5_A 78 TMDAVLEMLREVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVP-DLPYVAAHSLWSEAKNNNLELVLLTTPAIPE 156 (262)
T ss_dssp CHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECT-TCBTTTHHHHHHHHHHTTCEECEEECTTSCH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEc-CCChhhHHHHHHHHHHcCCceEEEECCCCCH
Confidence 567778899999998899987753211000011334778888877765 222 245566666666553321
Q ss_pred ----------------------cC--------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 117 ----------------------DG--------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 117 ----------------------~~--------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
.+ .+.++.++++.. ++||++.|||.|++++.+++.+|||+|++||+|
T Consensus 157 e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~---~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 157 DRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT---NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp HHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc---CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 01 234677777765 799999999999999999999999999999999
Q ss_pred ccCccc
Q 022271 167 VASEES 172 (300)
Q Consensus 167 l~t~Es 172 (300)
....|.
T Consensus 234 ~~~~~~ 239 (262)
T 1rd5_A 234 VRQLGE 239 (262)
T ss_dssp HHHHHS
T ss_pred HhHHHh
Confidence 988763
No 53
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.85 E-value=2.7e-08 Score=85.64 Aligned_cols=115 Identities=15% Similarity=0.129 Sum_probs=88.7
Q ss_pred HHHHHHHhh-cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeec------------
Q 022271 53 DLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ------------ 116 (300)
Q Consensus 53 ~~i~~~r~~-~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~------------ 116 (300)
+.++++|+. ++.|+.+|++...+.+..++.+.+.|++.|.++.-.. ..++++.+++.|.+++..
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~ 121 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVR 121 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence 568888887 6899999999887666669999999999999874321 156777778888877631
Q ss_pred -------------c---------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 -------------D---------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 -------------~---------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
. ..+..+.++++.+. ++||++.|||. ++++.+++.+|||+|.+||+++...
T Consensus 122 ~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~--~~~i~~~gGI~-~~~~~~~~~~Gad~vvvGsai~~~~ 194 (211)
T 3f4w_A 122 LLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRR--KARIAVAGGIS-SQTVKDYALLGPDVVIVGSAITHAA 194 (211)
T ss_dssp HHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCS--SCEEEEESSCC-TTTHHHHHTTCCSEEEECHHHHTCS
T ss_pred HHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcC--CCcEEEECCCC-HHHHHHHHHcCCCEEEECHHHcCCC
Confidence 0 12345566666542 69999999995 9999999999999999999988653
No 54
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.84 E-value=1.4e-08 Score=91.32 Aligned_cols=120 Identities=20% Similarity=0.235 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEe----eeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeec--
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGV----GVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ-- 116 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gv----nl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~-- 116 (300)
.+.+.+.+.++++|+..+.|+.+ |.+.....+..++.+.+.|++.+.+. ..| ..++++.+++.|...+..
T Consensus 74 ~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~-Dl~~ee~~~~~~~~~~~gl~~i~lia 152 (271)
T 1ujp_A 74 MSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILP-DLPPDEDPGLVRLAQEIGLETVFLLA 152 (271)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECT-TCCGGGCHHHHHHHHHHTCEEECEEC
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEec-CCCHHHHHHHHHHHHHcCCceEEEeC
Confidence 35567778899999888899877 32222234678888999999976654 333 246677777777654331
Q ss_pred -----------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEE
Q 022271 117 -----------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 161 (300)
Q Consensus 117 -----------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~ 161 (300)
.....++.++++.. ++||++.|||++++++.++ .|||||+
T Consensus 153 p~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGI~t~e~a~~~--~~ADgVI 227 (271)
T 1ujp_A 153 PTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART---ALPVAVGFGVSGKATAAQA--AVADGVV 227 (271)
T ss_dssp TTCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC---CSCEEEESCCCSHHHHHHH--TTSSEEE
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc---CCCEEEEcCCCCHHHHHHh--cCCCEEE
Confidence 01235667777665 7999999999999999996 9999999
Q ss_pred eccccccCcc
Q 022271 162 LGTRFVASEE 171 (300)
Q Consensus 162 ~GT~fl~t~E 171 (300)
+||+|.-..|
T Consensus 228 VGSAi~~~~~ 237 (271)
T 1ujp_A 228 VGSALVRALE 237 (271)
T ss_dssp ECHHHHHHHH
T ss_pred EChHHhcccc
Confidence 9999997754
No 55
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.83 E-value=1.1e-08 Score=95.69 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHhh-------cCCcEEeeeecCCCc---HHHHHHHHHcCCcEEEEcCCCCcH-HHHH-HH-HHCCCeE
Q 022271 47 APDYLRDLIRKTRSL-------TERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYSE-ELVL-EA-HSAGVKV 113 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~-------~~~P~gvnl~~~~~~---~~~~~~~~e~g~~~i~~~~G~~~~-~~v~-~~-~~~G~~v 113 (300)
+++.+.+.++.+++. ++.|+.|++.+.... .+.++.+.+.|++.|+++...... .... .. ...|...
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlS 276 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLS 276 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEE
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcC
Confidence 577888888877653 689999999876543 346788889999999876322110 0000 00 1233333
Q ss_pred eec--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 114 VPQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 114 ~~~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
... .-.+.++.++++.+.. ++|||+.|||.|++|+.+++.+|||+||+||.|+.
T Consensus 277 G~~i~p~a~~~v~~i~~~v~~-~ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 277 GKPLRDLSTQTIREMYALTQG-RVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTF 332 (367)
T ss_dssp EGGGHHHHHHHHHHHHHHTTT-CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CcccchhHHHHHHHHHHHcCC-CceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHh
Confidence 221 1135788888888742 69999999999999999999999999999999985
No 56
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.83 E-value=5.5e-09 Score=100.00 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=74.8
Q ss_pred cCCc-EEeeeecCCCc---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHH-HHCCCeEeec--cChhchHHHHHHhhCCCC
Q 022271 62 TERP-FGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYSEELVLEA-HSAGVKVVPQ--DGLISLLPMVVDLIGDRD 134 (300)
Q Consensus 62 ~~~P-~gvnl~~~~~~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~-~~~G~~v~~~--~~~~~ll~~v~~~~~~~~ 134 (300)
++.| +.|++.+.... .+.++.+.+.|++.|+++.+.....-++.+ .+.|...... ...+.+++++++++.. +
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~-~ 373 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-Q 373 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT-C
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCC-C
Confidence 3678 89998765442 345788889999999887543211001011 1233333221 1145788889888742 6
Q ss_pred CcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 135 IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 135 iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
+|||+.|||.|++|+.+++.+|||+||+||+|+.
T Consensus 374 iPVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~ 407 (443)
T 1tv5_A 374 IPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF 407 (443)
T ss_dssp SCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHh
Confidence 9999999999999999999999999999999997
No 57
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.80 E-value=6.2e-09 Score=96.70 Aligned_cols=157 Identities=15% Similarity=0.137 Sum_probs=98.8
Q ss_pred CccceecCCCCCCCCcHHHHHHH---HhCCceEE----ecCCCC-------CCHHHHHHHHHHHHhhcCCcEEeeeecCC
Q 022271 9 FEYGIVQAPLGPDISGPELVAAV---ANAGGLGL----LRAPDW-------EAPDYLRDLIRKTRSLTERPFGVGVVLAF 74 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~av---s~aGglG~----i~~~~~-------~~~~~l~~~i~~~r~~~~~P~gvnl~~~~ 74 (300)
.+.||+. -.+ |.+..+++.++ .++|.-.. ++|++. .+++.+.+.++.+|+.+++|+.|++.+..
T Consensus 127 ~~~pviv-sI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~ 204 (345)
T 3oix_A 127 DSKNHFL-SLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYF 204 (345)
T ss_dssp TCCCCEE-EEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCC
T ss_pred CCCCEEE-Eec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCC
Confidence 4567764 343 45555555444 44564312 244321 37899999999999999999999999875
Q ss_pred CcHHHHHHHHHcCC---cEEEEc--CCC---Cc--HHHHHHHHHCCCeEeec--cChhchHHHHHHhhCCCCCcEEEccC
Q 022271 75 PHNENIKAILSEKV---AVLQVS--WGE---YS--EELVLEAHSAGVKVVPQ--DGLISLLPMVVDLIGDRDIPIIAAGG 142 (300)
Q Consensus 75 ~~~~~~~~~~e~g~---~~i~~~--~G~---~~--~~~v~~~~~~G~~v~~~--~~~~~ll~~v~~~~~~~~iPViaaGG 142 (300)
...+..+.+.+.++ ++|... .|. .. ...+..-...|...... .-.+.++.++++++.. ++|||+.||
T Consensus 205 ~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~-~ipIIg~GG 283 (345)
T 3oix_A 205 DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNP-SIQIIGTGG 283 (345)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCT-TSEEEEESS
T ss_pred CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCC-CCcEEEECC
Confidence 44555666666555 444322 010 00 00000001122222211 0125678888887632 699999999
Q ss_pred CCChHHHHHHHHCCCcEEEecccccc
Q 022271 143 IVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 143 I~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
|.|++|+.+++.+|||+||+||.|+.
T Consensus 284 I~s~~da~~~l~aGAd~V~igra~~~ 309 (345)
T 3oix_A 284 VXTGRDAFEHILCGASMVQIGTALHQ 309 (345)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred CCChHHHHHHHHhCCCEEEEChHHHh
Confidence 99999999999999999999999765
No 58
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.79 E-value=8.6e-09 Score=88.44 Aligned_cols=154 Identities=19% Similarity=0.243 Sum_probs=100.3
Q ss_pred CccccccCCccceecCCCCCCCCc---HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc--CCcEEeeeecCCC
Q 022271 1 MGWRGMLGFEYGIVQAPLGPDISG---PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFP 75 (300)
Q Consensus 1 ~~~~~~lg~~~Pii~apM~~g~s~---~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~ 75 (300)
|++.+.|. +.|+|-- +. +.+. .+++.++.++ |+..+.. ++..++ ..+.++++|+.+ +.++|++...
T Consensus 1 ~~~~~~~~-~~~~i~~-~~-~~~~~~~~~~~~~~~~~-G~~~iev-~~~~~~-~~~~i~~ir~~~~~~~~ig~~~v~--- 71 (205)
T 1wa3_A 1 MKMEELFK-KHKIVAV-LR-ANSVEEAKEKALAVFEG-GVHLIEI-TFTVPD-ADTVIKELSFLKEKGAIIGAGTVT--- 71 (205)
T ss_dssp -CHHHHHH-HHCEEEE-EC-CSSHHHHHHHHHHHHHT-TCCEEEE-ETTSTT-HHHHHHHTHHHHHTTCEEEEESCC---
T ss_pred CcHHHHHh-hCCEEEE-Ee-cCCHHHHHHHHHHHHHC-CCCEEEE-eCCChh-HHHHHHHHHHHCCCCcEEEecccC---
Confidence 45555554 4566631 11 2332 2566665554 4666532 122332 234578888764 5677876432
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccC------------------------hhchHHHHHHhhC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDG------------------------LISLLPMVVDLIG 131 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~------------------------~~~ll~~v~~~~~ 131 (300)
+.+.++.+.+.|+++| ++.+. +.++++.+++.|+.+++... ...++.++++.+.
T Consensus 72 ~~~~~~~a~~~Gad~i-v~~~~-~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~~~~ 149 (205)
T 1wa3_A 72 SVEQCRKAVESGAEFI-VSPHL-DEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFP 149 (205)
T ss_dssp SHHHHHHHHHHTCSEE-ECSSC-CHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHTTCT
T ss_pred CHHHHHHHHHcCCCEE-EcCCC-CHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHhCC
Confidence 4567888899999999 76565 46788888888888776310 1233444444331
Q ss_pred CCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 132 DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 132 ~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
++||++.|||. .+++.+++.+|||+|.+||.++.
T Consensus 150 --~~pvia~GGI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 150 --NVKFVPTGGVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp --TCEEEEBSSCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred --CCcEEEcCCCC-HHHHHHHHHCCCCEEEECccccC
Confidence 69999999996 78999999999999999999987
No 59
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.78 E-value=2.3e-08 Score=86.87 Aligned_cols=138 Identities=20% Similarity=0.230 Sum_probs=90.2
Q ss_pred CceEEecC-CCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeE
Q 022271 35 GGLGLLRA-PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKV 113 (300)
Q Consensus 35 GglG~i~~-~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v 113 (300)
+|+.++.. .-..+++++.+.++++++.+. ++. .++.+ +.++.+.+.|++.|.++....+.+.+++... |..+
T Consensus 41 ~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~-~~~-~l~v~----~~~~~a~~~gad~v~l~~~~~~~~~~~~~~~-~~~i 113 (221)
T 1yad_A 41 NEVDFIHIRERSKSAADILKLLDLIFEGGI-DKR-KLVMN----GRVDIALFSTIHRVQLPSGSFSPKQIRARFP-HLHI 113 (221)
T ss_dssp GGCSEEEECCTTSCHHHHHHHHHHHHHTTC-CGG-GEEEE----SCHHHHHTTTCCEEEECTTSCCHHHHHHHCT-TCEE
T ss_pred CCCCEEEEccCCCCHHHHHHHHHHHHHhcC-cCC-eEEEe----ChHHHHHHcCCCEEEeCCCccCHHHHHHHCC-CCEE
Confidence 44555532 112578888888999887643 443 55543 2456777888888887755333444444332 4333
Q ss_pred eec-----------------------c----------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEE
Q 022271 114 VPQ-----------------------D----------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 160 (300)
Q Consensus 114 ~~~-----------------------~----------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV 160 (300)
... . ..+.+++++++.+ ++||+++||| +.+++.+++..||++|
T Consensus 114 g~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~---~~pvia~GGI-~~~nv~~~~~~Ga~gv 189 (221)
T 1yad_A 114 GRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI---SIPVIAIGGM-TPDRLRDVKQAGADGI 189 (221)
T ss_dssp EEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC---CSCEEEESSC-CGGGHHHHHHTTCSEE
T ss_pred EEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC---CCCEEEECCC-CHHHHHHHHHcCCCEE
Confidence 221 0 0234566666655 7999999999 9999999999999999
Q ss_pred EeccccccCcc-cCCCHHHHHHHH
Q 022271 161 CLGTRFVASEE-SYAHPEYKRKLV 183 (300)
Q Consensus 161 ~~GT~fl~t~E-s~~~~~~k~~i~ 183 (300)
.+||.|+.+++ ......+++.+.
T Consensus 190 ~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 190 AVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp EESHHHHTSSSHHHHHHHHHHHHH
T ss_pred EEhHHhhCCCCHHHHHHHHHHHHH
Confidence 99999998765 334455555554
No 60
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.77 E-value=7e-08 Score=86.58 Aligned_cols=118 Identities=19% Similarity=0.157 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhh-cCCcEEee----eecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeec-----
Q 022271 50 YLRDLIRKTRSL-TERPFGVG----VVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ----- 116 (300)
Q Consensus 50 ~l~~~i~~~r~~-~~~P~gvn----l~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~----- 116 (300)
...+.++++|+. ++.|+.+- -+...+.+..++.+.+.|++.+.+. ..+ ...+++.++++|...+..
T Consensus 80 ~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~-d~~~e~~~~~~~~~~~~g~~~i~l~~p~t 158 (268)
T 1qop_A 80 QCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA-DVPVEESAPFRQAALRHNIAPIFICPPNA 158 (268)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET-TCCGGGCHHHHHHHHHTTCEEECEECTTC
T ss_pred HHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEECCCC
Confidence 344778999988 78997652 1112234678999999999988775 333 356777888888764431
Q ss_pred ------------------------cC--------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 117 ------------------------DG--------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 117 ------------------------~~--------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
.| ...++.++++.. ++||++.|||.+++++.+++..|||+|++||
T Consensus 159 ~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~---~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 159 DDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH---AAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT---CCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc---CCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 00 245677777765 7999999999999999999999999999999
Q ss_pred ccccCcc
Q 022271 165 RFVASEE 171 (300)
Q Consensus 165 ~fl~t~E 171 (300)
++.-..|
T Consensus 236 ai~~~~~ 242 (268)
T 1qop_A 236 AIVKIIE 242 (268)
T ss_dssp HHHHHHH
T ss_pred HHhhhHh
Confidence 9988754
No 61
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.77 E-value=1.3e-08 Score=94.70 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHH---HHHHHHHcC-CcEEEEcCCC----Cc----HH-HHHHHHHCCCeE
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNE---NIKAILSEK-VAVLQVSWGE----YS----EE-LVLEAHSAGVKV 113 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~---~~~~~~e~g-~~~i~~~~G~----~~----~~-~v~~~~~~G~~v 113 (300)
+++.+.+.++.+|+.+++|+.|++.+.....+ .++.+.+.+ ++.|++.-.. .. +. .+..-...|..-
T Consensus 177 ~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlS 256 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLG 256 (354)
T ss_dssp SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEE
T ss_pred CHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCC
Confidence 78999999999999999999999998654333 344445777 9988753110 00 00 000001112222
Q ss_pred eec--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 114 VPQ--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 114 ~~~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
... .-.+.++.++++... ++|||+.|||.+++|+.+++.+|||+||+||.++..
T Consensus 257 G~~i~p~a~~~i~~v~~~~~--~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 257 GRYVLPTALANINAFYRRCP--GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEE 312 (354)
T ss_dssp GGGGHHHHHHHHHHHHHHCT--TSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHH
T ss_pred CCCCchHHHHHHHHHHHhCC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHh
Confidence 111 124677888888742 699999999999999999999999999999999974
No 62
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.76 E-value=5e-08 Score=90.94 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=38.4
Q ss_pred hHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 122 LLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 122 ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
++.++++.+. ++|||+.|||.|++|+.+++.+|||+||+||+|+.
T Consensus 267 ~v~~~~~~~~--~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv~Ta~~y 311 (354)
T 3tjx_A 267 NINAFYRRCP--GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQE 311 (354)
T ss_dssp HHHHHHHHCT--TSEEEEESSCCSHHHHHHHHHHTEEEEEECHHHHH
T ss_pred HHHHHHHhcC--CCcEEEeCCcCCHHHHHHHHHcCCCEEEEChhhhh
Confidence 3445555442 79999999999999999999999999999999886
No 63
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.76 E-value=1.2e-08 Score=92.85 Aligned_cols=142 Identities=20% Similarity=0.280 Sum_probs=96.0
Q ss_pred CCCcHHHHHHHHhCCceEEecCCCCCCHHH----------HHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcE
Q 022271 21 DISGPELVAAVANAGGLGLLRAPDWEAPDY----------LRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAV 90 (300)
Q Consensus 21 g~s~~~la~avs~aGglG~i~~~~~~~~~~----------l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~ 90 (300)
.++..+++.++.++|.-++.... ..+.+. ..+.|+++++.++.|+-++.-.. +.+.++.+.+.|++.
T Consensus 27 ~~~~~~~a~~~~~~Ga~~i~~~e-~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~--~~~~~~~~~~aGad~ 103 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMALE-RVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIG--HFVEAMILEAIGVDF 103 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECS-SCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETT--CHHHHHHHHHTTCSE
T ss_pred eechHHHHHHHHHCCCcEEEecc-ccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccC--CHHHHHHHHHCCCCE
Confidence 46678999999999987763211 111110 12467788888889987766443 478889999999998
Q ss_pred EEEcCCCC-----------------------cHHHHHHHHHCCCeEeecc------------------------------
Q 022271 91 LQVSWGEY-----------------------SEELVLEAHSAGVKVVPQD------------------------------ 117 (300)
Q Consensus 91 i~~~~G~~-----------------------~~~~v~~~~~~G~~v~~~~------------------------------ 117 (300)
|..++... +.+. ....+.|...+...
T Consensus 104 v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~-~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~ 182 (297)
T 2zbt_A 104 IDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEA-LRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLRE 182 (297)
T ss_dssp EEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHH-HHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCG
T ss_pred EeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHH-HHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCC
Confidence 84432110 1222 22345555444110
Q ss_pred -----------ChhchHHHHHHhhCCCCCcEE--EccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 118 -----------GLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 118 -----------~~~~ll~~v~~~~~~~~iPVi--aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
..+.++.++++.. ++||+ +.|||.+.+++.+++.+|||+|++||+++.+
T Consensus 183 ~~~~~~~~~~~~~~~~i~~l~~~~---~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~ 244 (297)
T 2zbt_A 183 DELMAYAKEIGAPFELVKWVHDHG---RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS 244 (297)
T ss_dssp GGHHHHHHHHTCCHHHHHHHHHHS---SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS
T ss_pred CCchhhhhcchhhHHHHHHHHHhc---CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC
Confidence 1234566677665 78998 9999999999999999999999999999865
No 64
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.70 E-value=1.4e-07 Score=84.41 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhhc-CCcEEe----eeecCCCcHHHHHHHHHcCCcEEEEcCCCCcH---HHHHHHHHCCCeEeec----
Q 022271 49 DYLRDLIRKTRSLT-ERPFGV----GVVLAFPHNENIKAILSEKVAVLQVSWGEYSE---ELVLEAHSAGVKVVPQ---- 116 (300)
Q Consensus 49 ~~l~~~i~~~r~~~-~~P~gv----nl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~---~~v~~~~~~G~~v~~~---- 116 (300)
+.+.+.++++|+.. +.|+.+ |.+.....+..++.+.+.|++.+.+. ..|++ ++++.++++|..++..
T Consensus 79 ~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~-dl~~ee~~~~~~~~~~~gl~~i~l~~p~ 157 (262)
T 2ekc_A 79 EDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP-DLPPEEAEELKAVMKKYVLSFVPLGAPT 157 (262)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT-TCCHHHHHHHHHHHHHTTCEECCEECTT
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC-CCCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 45557788998887 889877 21111123577888999999988775 44433 4556667788765431
Q ss_pred -------------------------cC---------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 117 -------------------------DG---------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 117 -------------------------~~---------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.| ...++.++++.. ++||++.|||++++++.+ +..|||+|++
T Consensus 158 t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~---~~pv~vG~GI~t~e~~~~-~~~gADgvIV 233 (262)
T 2ekc_A 158 STRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC---DKPVVVGFGVSKKEHARE-IGSFADGVVV 233 (262)
T ss_dssp CCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHC---CSCEEEESSCCSHHHHHH-HHTTSSEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc---CCCEEEeCCCCCHHHHHH-HHcCCCEEEE
Confidence 00 124566666655 799999999999999999 8899999999
Q ss_pred ccccccCcc
Q 022271 163 GTRFVASEE 171 (300)
Q Consensus 163 GT~fl~t~E 171 (300)
||+|.-..+
T Consensus 234 GSai~~~~~ 242 (262)
T 2ekc_A 234 GSALVKLAG 242 (262)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHhhhh
Confidence 999998754
No 65
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.70 E-value=1.1e-07 Score=83.88 Aligned_cols=121 Identities=17% Similarity=0.109 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCC----CcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeec---
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAF----PHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQ--- 116 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~----~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~--- 116 (300)
+.+...+.++++|+.++.|+.+-...+. ...+.++.+.+.|++.|.+.. .+ +..+++.+++.|..++..
T Consensus 64 ~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~~ 142 (248)
T 1geq_A 64 KLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD-LPVFHAKEFTEIAREEGIKTVFLAAP 142 (248)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT-CCGGGHHHHHHHHHHHTCEEEEEECT
T ss_pred CHHHHHHHHHHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC-CChhhHHHHHHHHHHhCCCeEEEECC
Confidence 4455678899999988888654321111 125788999999999998862 22 235555556666554321
Q ss_pred -----------------------c---C--------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 117 -----------------------D---G--------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 117 -----------------------~---~--------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
. + .+.++.++++.+ ++||++.|||.+++++.+++.+|||+|++
T Consensus 143 ~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~---~~pi~~~GGI~~~e~i~~~~~~Gad~viv 219 (248)
T 1geq_A 143 NTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC---RNKVAVGFGVSKREHVVSLLKEGANGVVV 219 (248)
T ss_dssp TCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc---CCCEEEEeecCCHHHHHHHHHcCCCEEEE
Confidence 0 0 133566666665 79999999999999999999999999999
Q ss_pred ccccccCcc
Q 022271 163 GTRFVASEE 171 (300)
Q Consensus 163 GT~fl~t~E 171 (300)
||++....|
T Consensus 220 Gsai~~~~~ 228 (248)
T 1geq_A 220 GSALVKIIG 228 (248)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHhhHh
Confidence 999987653
No 66
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.69 E-value=3.2e-08 Score=87.75 Aligned_cols=130 Identities=14% Similarity=0.211 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEe----eeecCCCcHHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCCCeEeec--
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGV----GVVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVPQ-- 116 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gv----nl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G~~v~~~-- 116 (300)
.+.+.+.+.++++|+. .|+.+ |.+.....+..++.+.+.|++.+.+. ..|+ .++.+.++++|+..+..
T Consensus 73 ~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~Iip-DLP~eE~~~~~~~~~~~Gl~~I~lva 149 (252)
T 3tha_A 73 VDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVP-ELSFEESDDLIKECERYNIALITLVS 149 (252)
T ss_dssp CCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECT-TCCGGGCHHHHHHHHHTTCEECEEEE
T ss_pred CCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeC-CCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 3556777777777753 46543 22222234677888888888888776 4553 45666677788776542
Q ss_pred ---------------------------cC--------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEE
Q 022271 117 ---------------------------DG--------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 161 (300)
Q Consensus 117 ---------------------------~~--------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~ 161 (300)
.| ...++.++++.. ++||++.+||++++++.++.. +||||+
T Consensus 150 P~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~a~~~~~-~ADGVI 225 (252)
T 3tha_A 150 VTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT---NLPIFVGFGIQNNQDVKRMRK-VADGVI 225 (252)
T ss_dssp TTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHTT-TSSEEE
T ss_pred CCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc---CCcEEEEcCcCCHHHHHHHHh-cCCEEE
Confidence 11 123555666554 799999999999999988766 699999
Q ss_pred eccccccCcccCCCHHHHHHH
Q 022271 162 LGTRFVASEESYAHPEYKRKL 182 (300)
Q Consensus 162 ~GT~fl~t~Es~~~~~~k~~i 182 (300)
+||+|+-.-|....+...+.+
T Consensus 226 VGSAiVk~i~~~~~~~~~~~~ 246 (252)
T 3tha_A 226 VGTSIVKCFKQGNLDIIMKDI 246 (252)
T ss_dssp ECHHHHHHTTSSCHHHHHHHH
T ss_pred ECHHHHHHHHhcCHHHHHHHH
Confidence 999999877655444444443
No 67
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.69 E-value=1.2e-07 Score=83.93 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=67.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----------cChhchHHHHHH-hhCCCC-CcEEEccCCCCh
Q 022271 79 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----------DGLISLLPMVVD-LIGDRD-IPIIAAGGIVDA 146 (300)
Q Consensus 79 ~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----------~~~~~ll~~v~~-~~~~~~-iPViaaGGI~~g 146 (300)
..+.+++.|..++-... +...+.+++.+.|...+-. ..+..+++++++ .. + +|||++|||+++
T Consensus 116 aa~~L~k~Gf~Vlpy~~--~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~---~~vPVI~~GGI~tp 190 (268)
T 2htm_A 116 AAERLIEEDFLVLPYMG--PDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKA---SLPPVVVDAGLGLP 190 (268)
T ss_dssp HHHHHHHTTCEECCEEC--SCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTT---TSSCBEEESCCCSH
T ss_pred HHHHHHHCCCEEeeccC--CCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcC---CCCeEEEeCCCCCH
Confidence 34445555666552221 2235556665555544321 124567888887 44 7 999999999999
Q ss_pred HHHHHHHHCCCcEEEeccccccCcccCC--CHHHHHHHHc
Q 022271 147 RGYVAALSLGAQGICLGTRFVASEESYA--HPEYKRKLVE 184 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~GT~fl~t~Es~~--~~~~k~~i~~ 184 (300)
+|++.++.+|||||++||++..+ +++. ..+|++++..
T Consensus 191 sDAa~AmeLGAdgVlVgSAI~~a-~dP~~ma~af~~Av~a 229 (268)
T 2htm_A 191 SHAAEVMELGLDAVLVNTAIAEA-QDPPAMAEAFRLAVEA 229 (268)
T ss_dssp HHHHHHHHTTCCEEEESHHHHTS-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhCC-CCHHHHHHHHHHHHHH
Confidence 99999999999999999999843 4343 5667776654
No 68
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.68 E-value=7.7e-08 Score=87.83 Aligned_cols=178 Identities=14% Similarity=0.201 Sum_probs=106.4
Q ss_pred CCCcHHHHHHHHhCCceEE-ecC---------CC---CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcC
Q 022271 21 DISGPELVAAVANAGGLGL-LRA---------PD---WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEK 87 (300)
Q Consensus 21 g~s~~~la~avs~aGglG~-i~~---------~~---~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g 87 (300)
+++..+++.++.++|.-.+ .-+ .+ +.+++ .++++++.++.|+-+|.... +.+.++.+.+.|
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~----~i~~I~~~~~iPv~~k~r~g--~~~~~~~~~a~G 100 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPT----IVEEVMNAVSIPVMAKARIG--HIVEARVLEAMG 100 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHH----HHHHHHHHCSSCEEEEECTT--CHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHH----HHHHHHHhCCCCEEeccccc--chHHHHHHHHCC
Confidence 3567899999999987766 221 01 12343 45556666788988777642 256677778888
Q ss_pred CcEEEEcC----------------CCC-------cHHHHHHHHHCCCeEeec----------------------------
Q 022271 88 VAVLQVSW----------------GEY-------SEELVLEAHSAGVKVVPQ---------------------------- 116 (300)
Q Consensus 88 ~~~i~~~~----------------G~~-------~~~~v~~~~~~G~~v~~~---------------------------- 116 (300)
++.|..+. |.+ +.+..... +.|...+..
T Consensus 101 Ad~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~-~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~g 179 (305)
T 2nv1_A 101 VDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRI-AEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVA 179 (305)
T ss_dssp CSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHH-HTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHH-HCCCCEEEeccccCccchHHHHhhhhhhhccchhhcc
Confidence 88886321 110 12223222 456544321
Q ss_pred -------------cChhchHHHHHHhhCCCCCcEE--EccCCCChHHHHHHHHCCCcEEEeccccccCccc-CCCHHHHH
Q 022271 117 -------------DGLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKR 180 (300)
Q Consensus 117 -------------~~~~~ll~~v~~~~~~~~iPVi--aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es-~~~~~~k~ 180 (300)
...+.+++++++.. ++||+ +.|||.+++++.+++.+|||+|++||+|+.+.+. .....+++
T Consensus 180 i~~~~~~~~~~~~~~~~~~i~~i~~~~---~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 180 MSEDELMTEAKNLGAPYELLLQIKKDG---KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp SCGGGHHHHHHHHTCCHHHHHHHHHHT---SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred ccchhhhcccccccccHHHHHHHHHhc---CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 12345677777765 79999 9999999999999999999999999999987542 24566777
Q ss_pred HHHcCCCcceEEEecccCCCCCCCceecCh
Q 022271 181 KLVEMDKTEYTDVFGRARWPGAPHRVLQTP 210 (300)
Q Consensus 181 ~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~ 210 (300)
.+.+..+.+....++ ...|.+.|++...
T Consensus 257 ~~~~~~~~~~~~~~~--~~~g~~~~~~~~~ 284 (305)
T 2nv1_A 257 ATTHFTDYKLIAELS--KELGTAMKGIEIS 284 (305)
T ss_dssp HHHTTTCHHHHHHHT--SCC----------
T ss_pred HHHHhcChhhHHHHH--HHhhhhhcCCChh
Confidence 776655443111111 2246777777533
No 69
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.64 E-value=9.1e-07 Score=79.46 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=95.5
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHH---HHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC-CCc-
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPD---YLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG-EYS- 99 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~---~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G-~~~- 99 (300)
.++|.+..++|.-+ |+.. .++. .-.+.++++|+.++.|+-.+=+. -+..+++.+.+.|++.|.+... .++
T Consensus 75 ~~~A~~y~~~GA~~-isvl--td~~~f~Gs~~~l~~ir~~v~lPvl~kdfi--id~~qv~~A~~~GAD~VlLi~a~l~~~ 149 (272)
T 3qja_A 75 AKLAQAYQDGGARI-VSVV--TEQRRFQGSLDDLDAVRASVSIPVLRKDFV--VQPYQIHEARAHGADMLLLIVAALEQS 149 (272)
T ss_dssp HHHHHHHHHTTCSE-EEEE--CCGGGHHHHHHHHHHHHHHCSSCEEEESCC--CSHHHHHHHHHTTCSEEEEEGGGSCHH
T ss_pred HHHHHHHHHcCCCE-EEEe--cChhhcCCCHHHHHHHHHhCCCCEEECccc--cCHHHHHHHHHcCCCEEEEecccCCHH
Confidence 47888777766544 3321 1222 22346788888888898544221 2355688899999999987322 222
Q ss_pred --HHHHHHHHHCCCeEeec----------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHH
Q 022271 100 --EELVLEAHSAGVKVVPQ----------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGY 149 (300)
Q Consensus 100 --~~~v~~~~~~G~~v~~~----------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v 149 (300)
.++++.+++.|..++.. ...+..+.++++.+.. ++|||+.|||.+++++
T Consensus 150 ~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~-~~pvVaegGI~t~edv 228 (272)
T 3qja_A 150 VLVSMLDRTESLGMTALVEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPS-SVIRIAESGVRGTADL 228 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCT-TSEEEEESCCCSHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcc-cCEEEEECCCCCHHHH
Confidence 24556667788876543 0123455666665521 6999999999999999
Q ss_pred HHHHHCCCcEEEeccccccCc
Q 022271 150 VAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 150 ~aal~lGAdgV~~GT~fl~t~ 170 (300)
..++.+||+||.+|++|+.+.
T Consensus 229 ~~l~~~GadgvlVGsal~~a~ 249 (272)
T 3qja_A 229 LAYAGAGADAVLVGEGLVTSG 249 (272)
T ss_dssp HHHHHTTCSEEEECHHHHTCS
T ss_pred HHHHHcCCCEEEEcHHHhCCC
Confidence 999999999999999999875
No 70
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.64 E-value=1.2e-07 Score=81.44 Aligned_cols=137 Identities=18% Similarity=0.235 Sum_probs=87.7
Q ss_pred cHHHHHHHHhCCceEEecCC-CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHH
Q 022271 24 GPELVAAVANAGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEEL 102 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~-~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~ 102 (300)
..+.+.++.++| +..+... ...+++.+.+.++++++.+. +++++++.+ +.++.+.+.|++.|.+..+..+.+.
T Consensus 28 ~~~~~~~~~~~G-~~~i~l~~~~~~~~~~~~~~~~l~~~~~-~~~v~v~v~----~~~~~a~~~gad~v~l~~~~~~~~~ 101 (215)
T 1xi3_A 28 EVESVREALEGG-ATAIQMRIKNAPTREMYEIGKTLRQLTR-EYDALFFVD----DRVDVALAVDADGVQLGPEDMPIEV 101 (215)
T ss_dssp HHHHHHHHHHTT-CSEEEECCCSCCHHHHHHHHHHHHHHHH-HTTCEEEEE----SCHHHHHHHTCSEEEECTTSCCHHH
T ss_pred HHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHHH-HcCCeEEEc----ChHHHHHHcCCCEEEECCccCCHHH
Confidence 346777777766 4444221 12467777777777776543 245555553 3456777888888877544333333
Q ss_pred HHHHH-------------------HCCCeEeec----c---------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHH
Q 022271 103 VLEAH-------------------SAGVKVVPQ----D---------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 150 (300)
Q Consensus 103 v~~~~-------------------~~G~~v~~~----~---------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~ 150 (300)
+++++ +.|+..+.. . ..+..+.++++.+ ++||+++|||. .+++.
T Consensus 102 ~~~~~~~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~pvia~GGI~-~~nv~ 177 (215)
T 1xi3_A 102 AKEIAPNLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV---KIPVVAIGGIN-KDNAR 177 (215)
T ss_dssp HHHHCTTSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC---SSCEEEESSCC-TTTHH
T ss_pred HHHhCCCCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC---CCCEEEECCcC-HHHHH
Confidence 33332 223322210 0 1345666776665 79999999999 99999
Q ss_pred HHHHCCCcEEEeccccccCc
Q 022271 151 AALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 151 aal~lGAdgV~~GT~fl~t~ 170 (300)
+++.+||++|.+||.+..++
T Consensus 178 ~~~~~Ga~gv~vgs~i~~~~ 197 (215)
T 1xi3_A 178 EVLKTGVDGIAVISAVMGAE 197 (215)
T ss_dssp HHHTTTCSEEEESHHHHTSS
T ss_pred HHHHcCCCEEEEhHHHhCCC
Confidence 99999999999999998765
No 71
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.64 E-value=3.8e-07 Score=78.68 Aligned_cols=134 Identities=19% Similarity=0.244 Sum_probs=97.1
Q ss_pred CcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHH
Q 022271 23 SGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEEL 102 (300)
Q Consensus 23 s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~ 102 (300)
...+++.++.+ ||+.++-. .+.+++.. +.++++++ .+..++.+.+. ..+.++.+++.|++++... +. ..++
T Consensus 26 ~~~~~~~~l~~-gGv~~iel-~~k~~~~~-~~i~~~~~-~~~~~gag~vl---~~d~~~~A~~~GAd~v~~~-~~-d~~v 96 (207)
T 2yw3_A 26 DLLGLARVLEE-EGVGALEI-TLRTEKGL-EALKALRK-SGLLLGAGTVR---SPKEAEAALEAGAAFLVSP-GL-LEEV 96 (207)
T ss_dssp CHHHHHHHHHH-TTCCEEEE-ECSSTHHH-HHHHHHTT-SSCEEEEESCC---SHHHHHHHHHHTCSEEEES-SC-CHHH
T ss_pred HHHHHHHHHHH-cCCCEEEE-eCCChHHH-HHHHHHhC-CCCEEEeCeEe---eHHHHHHHHHcCCCEEEcC-CC-CHHH
Confidence 34567777655 55887754 24556554 77888888 77788888754 4688999999999999765 33 4566
Q ss_pred HHHHHHCCCeEeec--------------------c-----ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCC
Q 022271 103 VLEAHSAGVKVVPQ--------------------D-----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 157 (300)
Q Consensus 103 v~~~~~~G~~v~~~--------------------~-----~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGA 157 (300)
++..++.|..++.. . +-...+.+++..+. ++|+++.|||. .+.+.+++.+||
T Consensus 97 ~~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~fpa~~~gG~~~lk~l~~~~~--~ipvvaiGGI~-~~n~~~~l~aGa 173 (207)
T 2yw3_A 97 AALAQARGVPYLPGVLTPTEVERALALGLSALKFFPAEPFQGVRVLRAYAEVFP--EVRFLPTGGIK-EEHLPHYAALPN 173 (207)
T ss_dssp HHHHHHHTCCEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHHHCT--TCEEEEBSSCC-GGGHHHHHTCSS
T ss_pred HHHHHHhCCCEEecCCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHHhhCC--CCcEEEeCCCC-HHHHHHHHhCCC
Confidence 66666666655432 1 12355666666552 79999999997 699999999999
Q ss_pred cEEEecccccc
Q 022271 158 QGICLGTRFVA 168 (300)
Q Consensus 158 dgV~~GT~fl~ 168 (300)
++|.+||.++.
T Consensus 174 ~~vavgSai~~ 184 (207)
T 2yw3_A 174 LLAVGGSWLLQ 184 (207)
T ss_dssp BSCEEESGGGS
T ss_pred cEEEEehhhhC
Confidence 99999999876
No 72
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=98.62 E-value=7.3e-07 Score=75.70 Aligned_cols=154 Identities=12% Similarity=0.141 Sum_probs=105.1
Q ss_pred CccccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeec---CCCcH
Q 022271 1 MGWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVL---AFPHN 77 (300)
Q Consensus 1 ~~~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~---~~~~~ 77 (300)
|++...|. +.|||-|= -...+|-.++..-=-..|+..+ +...+.+.++++++..+.+| |++=. -.+++
T Consensus 1 ~~~~~~~~-~~piI~Av----r~~~~l~~al~s~~~~ifll~g---~i~~l~~~v~~lk~~~K~v~-Vh~Dli~Gls~d~ 71 (192)
T 3kts_A 1 MSLELPFS-NQSIIPAA----HNQKDMEKILELDLTYMVMLET---HVAQLKALVKYAQAGGKKVL-LHADLVNGLKNDD 71 (192)
T ss_dssp --CCCSCT-TCCEEEEE----SSSHHHHHHTTSSCCEEEECSE---ETTTHHHHHHHHHHTTCEEE-EEGGGEETCCCSH
T ss_pred Cchhhhhh-cCCEEEEe----cCHHHHHHHHcCCCCEEEEecC---cHHHHHHHHHHHHHcCCeEE-EecCchhccCCcH
Confidence 55444443 68998521 2445666655433345555443 44667788888888765554 44221 23457
Q ss_pred HHHHHHHHc-CCcEEEEcCCCCcHHHHHHHHHCCCeEeec---------------------------cCh-hchHHHHHH
Q 022271 78 ENIKAILSE-KVAVLQVSWGEYSEELVLEAHSAGVKVVPQ---------------------------DGL-ISLLPMVVD 128 (300)
Q Consensus 78 ~~~~~~~e~-g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~---------------------------~~~-~~ll~~v~~ 128 (300)
..++.+.+. +|+.|... ....+..+++.|...+.. .+. -..+.++++
T Consensus 72 ~ai~fL~~~~~pdGIIsT----k~~~i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~ 147 (192)
T 3kts_A 72 YAIDFLCTEICPDGIIST----RGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQ 147 (192)
T ss_dssp HHHHHHHHTTCCSEEEES----CHHHHHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEeC----cHHHHHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHH
Confidence 777877774 89988775 246788889999988764 111 134555666
Q ss_pred hhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 129 LIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 129 ~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
.+ ++|||++|+|.|.+++.+++..||++|..|++.|+--
T Consensus 148 ~~---~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 148 KL---HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp HH---CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGTT
T ss_pred hc---CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhCc
Confidence 65 8999999999999999999999999999999999863
No 73
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.61 E-value=5.6e-08 Score=88.33 Aligned_cols=157 Identities=19% Similarity=0.259 Sum_probs=100.4
Q ss_pred CCcHHHHHHHHhCCceE--Eec--------CCC---CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCC
Q 022271 22 ISGPELVAAVANAGGLG--LLR--------APD---WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (300)
Q Consensus 22 ~s~~~la~avs~aGglG--~i~--------~~~---~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~ 88 (300)
+.++++|..-.++|.-. +|- .++ ..++ +.|+++|+..+.|+-.+.-.. +.+.++.+.+.|+
T Consensus 28 ~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~----~~i~~i~~~v~iPvl~k~~i~--~ide~qil~aaGA 101 (297)
T 4adt_A 28 VKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDP----LKIEEIRKCISINVLAKVRIG--HFVEAQILEELKV 101 (297)
T ss_dssp ESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCH----HHHHHHHTTCCSEEEEEEETT--CHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCH----HHHHHHHHhcCCCEEEeccCC--cHHHHHHHHHcCC
Confidence 56789988877777643 341 111 0134 467788888889997664332 2667888889999
Q ss_pred cEEEEcCCCCcHHHHHHHHH----------------------CCCeEeecc-----------------------------
Q 022271 89 AVLQVSWGEYSEELVLEAHS----------------------AGVKVVPQD----------------------------- 117 (300)
Q Consensus 89 ~~i~~~~G~~~~~~v~~~~~----------------------~G~~v~~~~----------------------------- 117 (300)
++|..+.+..+.++++.+++ .|..++...
T Consensus 102 D~Id~s~~~~~~~li~~i~~~~~g~~vvv~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~ 181 (297)
T 4adt_A 102 DMLDESEVLTMADEYNHINKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLD 181 (297)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CEEEcCCCCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhcccc
Confidence 99955443222233333322 233222111
Q ss_pred ------------ChhchHHHHHHhhCCCCCcEE--EccCCCChHHHHHHHHCCCcEEEeccccccCccc-CCCHHHHHHH
Q 022271 118 ------------GLISLLPMVVDLIGDRDIPII--AAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKRKL 182 (300)
Q Consensus 118 ------------~~~~ll~~v~~~~~~~~iPVi--aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es-~~~~~~k~~i 182 (300)
..+.+++++++.+ ++||+ +.|||.+++++..++.+|||+|++||.|+.+..- .....+++.+
T Consensus 182 ~d~L~t~~~~~~~~~~ll~~i~~~~---~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai 258 (297)
T 4adt_A 182 ESEVYNFAKKLRAPIDLILLTRKLK---RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAV 258 (297)
T ss_dssp TTTHHHHHHHHTCCHHHHHHHHHHT---SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHhc---CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHH
Confidence 1235677777776 67876 9999999999999999999999999999976421 1234455555
Q ss_pred HcCCC
Q 022271 183 VEMDK 187 (300)
Q Consensus 183 ~~a~~ 187 (300)
.+..+
T Consensus 259 ~~~~~ 263 (297)
T 4adt_A 259 SNFNN 263 (297)
T ss_dssp HTTTC
T ss_pred HhhCC
Confidence 55443
No 74
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.61 E-value=1.2e-07 Score=84.82 Aligned_cols=156 Identities=15% Similarity=0.136 Sum_probs=88.8
Q ss_pred CccceecCCCCCCCCcHH----HHHHHHhCCceEEecC---CC-CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHH
Q 022271 9 FEYGIVQAPLGPDISGPE----LVAAVANAGGLGLLRA---PD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENI 80 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~----la~avs~aGglG~i~~---~~-~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~ 80 (300)
++.|++-.+. +..+.+ ++..+.++|+-+++.. +. ....++..+.++.+|++.+..+-+-. ...++.+.+
T Consensus 64 ~~~~~~pn~~--~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~-~~~~~~~~a 140 (264)
T 1xm3_A 64 SKYTLLPNTA--GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLP-YTSDDVVLA 140 (264)
T ss_dssp GGSEEEEECT--TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEE-EECSCHHHH
T ss_pred cCCeEcCCcc--ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEE-EcCCCHHHH
Confidence 3555544342 344443 5666666776665311 10 11124455666666665322221110 112334567
Q ss_pred HHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEE
Q 022271 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 160 (300)
Q Consensus 81 ~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV 160 (300)
+.+.+.++++|.. .|.... ...| .....++.++++.. ++||++.|||.+++++.+++.+|||||
T Consensus 141 ~~~~~~gad~v~~-~~~~~G------t~~~------~~~~~~l~~i~~~~---~iPviv~gGI~t~eda~~~~~~GAdgV 204 (264)
T 1xm3_A 141 RKLEELGVHAIMP-GASPIG------SGQG------ILNPLNLSFIIEQA---KVPVIVDAGIGSPKDAAYAMELGADGV 204 (264)
T ss_dssp HHHHHHTCSCBEE-CSSSTT------CCCC------CSCHHHHHHHHHHC---SSCBEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHhCCCEEEE-CCcccC------CCCC------CCCHHHHHHHHhcC---CCCEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 7777778877733 221100 0001 11355778888765 899999999999999999999999999
Q ss_pred EeccccccCccc-CCCHHHHHHHH
Q 022271 161 CLGTRFVASEES-YAHPEYKRKLV 183 (300)
Q Consensus 161 ~~GT~fl~t~Es-~~~~~~k~~i~ 183 (300)
++||+|+.+... .....+++.+.
T Consensus 205 iVGSAi~~a~dp~~~~~~l~~~v~ 228 (264)
T 1xm3_A 205 LLNTAVSGADDPVKMARAMKLAVE 228 (264)
T ss_dssp EESHHHHTSSSHHHHHHHHHHHHH
T ss_pred EEcHHHhCCCCHHHHHHHHHHHHH
Confidence 999999876431 12334444444
No 75
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.60 E-value=8.6e-07 Score=79.51 Aligned_cols=141 Identities=15% Similarity=0.171 Sum_probs=98.4
Q ss_pred cHHHHHHHHhCCceEE--ecCCCCC--CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc
Q 022271 24 GPELVAAVANAGGLGL--LRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS 99 (300)
Q Consensus 24 ~~~la~avs~aGglG~--i~~~~~~--~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~ 99 (300)
..++|.+..++|.-++ +....+. +++ .++++|+.++.|+-.+=+.. +..++..+.+.|++.|.+.....+
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~~----~L~~ir~~v~lPVl~Kdfi~--d~~qi~ea~~~GAD~VlLi~a~L~ 154 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAPE----FLTAARQACSLPALRKDFLF--DPYQVYEARSWGADCILIIMASVD 154 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCHH----HHHHHHHTSSSCEEEESCCC--STHHHHHHHHTTCSEEEEETTTSC
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCHH----HHHHHHHhcCCCEEECCccC--CHHHHHHHHHcCCCEEEEcccccC
Confidence 3588888888775443 3222221 443 56778888889986554433 344678888999999887643332
Q ss_pred ----HHHHHHHHHCCCeEeec----------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChH
Q 022271 100 ----EELVLEAHSAGVKVVPQ----------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDAR 147 (300)
Q Consensus 100 ----~~~v~~~~~~G~~v~~~----------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~ 147 (300)
.++++.+++.|..++.. ...+....++++.+.. ++|||+.|||.+++
T Consensus 155 ~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~-~~~vIaesGI~t~e 233 (272)
T 3tsm_A 155 DDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPS-DRLLVGESGIFTHE 233 (272)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCT-TSEEEEESSCCSHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCC-CCcEEEECCCCCHH
Confidence 25566677888876643 0123445556655532 69999999999999
Q ss_pred HHHHHHHCCCcEEEeccccccCcc
Q 022271 148 GYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 148 ~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
|+..+..+|||||.+|++|+.++.
T Consensus 234 dv~~l~~~Ga~gvLVG~almr~~d 257 (272)
T 3tsm_A 234 DCLRLEKSGIGTFLIGESLMRQHD 257 (272)
T ss_dssp HHHHHHTTTCCEEEECHHHHTSSC
T ss_pred HHHHHHHcCCCEEEEcHHHcCCcC
Confidence 999999999999999999998864
No 76
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.58 E-value=2.9e-07 Score=80.66 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=91.3
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC----CCcHHHHHHHHHCCCeEeec------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG----EYSEELVLEAHSAGVKVVPQ------------ 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G----~~~~~~v~~~~~~G~~v~~~------------ 116 (300)
+.++++|+.++.|+.+-|+..+| +.+++.+.+.|++.|.++.. ..+.+.++.+++.|..++..
T Consensus 52 ~~v~~lr~~~~~~~~vhlmv~dp-~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~ 130 (230)
T 1tqj_A 52 LIVDAIRPLTKKTLDVHLMIVEP-EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEY 130 (230)
T ss_dssp HHHHHHGGGCCSEEEEEEESSSG-GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTT
T ss_pred HHHHHHHhhcCCcEEEEEEccCH-HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHH
Confidence 67888999888899999999765 45789999999999999866 33567888888898887643
Q ss_pred -----------------------cChhchHHHHHHhhC--CCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 -----------------------DGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 -----------------------~~~~~ll~~v~~~~~--~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
...+..+.++++... +.++||.+.|||.. +.+..+...|||++.+||+++..+
T Consensus 131 ~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~a~ 208 (230)
T 1tqj_A 131 VLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFNAP 208 (230)
T ss_dssp TGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHTSS
T ss_pred HHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCC
Confidence 012345566665541 12699999999997 889999999999999999988753
No 77
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.55 E-value=3.1e-07 Score=80.72 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=91.5
Q ss_pred cHHHHHHHHhCCceEEecCCC----C-CCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC--
Q 022271 24 GPELVAAVANAGGLGLLRAPD----W-EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG-- 96 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~----~-~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G-- 96 (300)
..+++.+..++|. -.+.... + ..+ .. +.++++++.++.|+-+|..... .+.++.+++.|++.|.++..
T Consensus 34 ~~~~a~~~~~~Ga-d~i~v~~~d~~~~~~~-~~-~~i~~i~~~~~ipv~v~ggI~~--~~~~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 34 PLEAALAWQRSGA-EWLHLVDLDAAFGTGD-NR-ALIAEVAQAMDIKVELSGGIRD--DDTLAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp HHHHHHHHHHTTC-SEEEEEEHHHHHTSCC-CH-HHHHHHHHHCSSEEEEESSCCS--HHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHcCC-CEEEEecCchhhcCCC-hH-HHHHHHHHhcCCcEEEECCcCC--HHHHHHHHHcCCCEEEECchHh
Confidence 3477777777763 3332100 0 011 12 6788888888899988876643 44577777778877765321
Q ss_pred -C------------------------------------CcHHHHHHHHHCCCeEe--ec-------c-ChhchHHHHHHh
Q 022271 97 -E------------------------------------YSEELVLEAHSAGVKVV--PQ-------D-GLISLLPMVVDL 129 (300)
Q Consensus 97 -~------------------------------------~~~~~v~~~~~~G~~v~--~~-------~-~~~~ll~~v~~~ 129 (300)
. .+.+.++.+.+.|+..+ +. . ..+.++.++++.
T Consensus 109 ~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~ 188 (244)
T 1vzw_A 109 ETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAA 188 (244)
T ss_dssp HCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHT
T ss_pred hCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHh
Confidence 0 11233344444444311 11 0 135678888877
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHC---CCcEEEeccccccCc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSL---GAQGICLGTRFVASE 170 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~l---GAdgV~~GT~fl~t~ 170 (300)
+ ++|||+.|||.+.+++.+++.+ |||+|++||+|+..+
T Consensus 189 ~---~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~ 229 (244)
T 1vzw_A 189 T---DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKA 229 (244)
T ss_dssp C---SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTS
T ss_pred c---CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCC
Confidence 6 7999999999999999999999 999999999999764
No 78
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.51 E-value=3.7e-07 Score=80.15 Aligned_cols=141 Identities=18% Similarity=0.218 Sum_probs=91.6
Q ss_pred cHHHHHHHHhCCceEEecCC----CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC--
Q 022271 24 GPELVAAVANAGGLGLLRAP----DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-- 97 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~----~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~-- 97 (300)
..+++.+..++| ...+.-. .+...... +.++++++.++.|+-+|..... .+.++.+++.|++.|.+....
T Consensus 33 ~~~~a~~~~~~G-ad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~--~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 33 AVDAALGWQRDG-AEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRD--DESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHHTT-CSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCS--HHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHHcC-CCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHcCCCEEEECchHhh
Confidence 347777777776 3333210 01011122 6788888888899988877643 456777777888877664311
Q ss_pred -C----------------------------------------cHHHHHHHHHCCCeEe--ec---c-----ChhchHHHH
Q 022271 98 -Y----------------------------------------SEELVLEAHSAGVKVV--PQ---D-----GLISLLPMV 126 (300)
Q Consensus 98 -~----------------------------------------~~~~v~~~~~~G~~v~--~~---~-----~~~~ll~~v 126 (300)
| +.+.++.+.+.|+..+ +. . ..+.++.++
T Consensus 109 ~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l 188 (244)
T 2y88_A 109 NPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGV 188 (244)
T ss_dssp CHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHH
Confidence 0 1233333444443321 11 0 134577777
Q ss_pred HHhhCCCCCcEEEccCCCChHHHHHHHHC---CCcEEEeccccccCcc
Q 022271 127 VDLIGDRDIPIIAAGGIVDARGYVAALSL---GAQGICLGTRFVASEE 171 (300)
Q Consensus 127 ~~~~~~~~iPViaaGGI~~g~~v~aal~l---GAdgV~~GT~fl~t~E 171 (300)
++.+ ++|||+.|||.+.+++.+++.+ |||+|++||+|+..+.
T Consensus 189 ~~~~---~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~ 233 (244)
T 2y88_A 189 ADRT---DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRF 233 (244)
T ss_dssp HTTC---SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSS
T ss_pred HHhC---CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCc
Confidence 7665 7999999999999999999999 9999999999998654
No 79
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.44 E-value=2.4e-06 Score=74.45 Aligned_cols=116 Identities=13% Similarity=0.223 Sum_probs=85.3
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC--C--CcHHHHHHHHHCCCeEeec------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG--E--YSEELVLEAHSAGVKVVPQ------------ 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G--~--~~~~~v~~~~~~G~~v~~~------------ 116 (300)
+.++++|+.++.|+.+.++.+. ..+.++.+.+.|++.|.++.. . .+.++++.+++.|..++..
T Consensus 58 ~~i~~l~~~~~~~~~v~l~vnd-~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~ 136 (230)
T 1rpx_A 58 LVVDSLRPITDLPLDVHLMIVE-PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEY 136 (230)
T ss_dssp HHHHHHGGGCCSCEEEEEESSS-HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTT
T ss_pred HHHHHHHhccCCcEEEEEEecC-HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 5677788887789999998875 346888899999999998854 2 1356788888887665432
Q ss_pred --------------c---C------hhchHHHHHHhhC--CCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 --------------D---G------LISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 --------------~---~------~~~ll~~v~~~~~--~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
. + .+..+.++++.+. ..++|+++.|||. .+.+..++..|||+|.+||.+..++
T Consensus 137 ~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~a~ 214 (230)
T 1rpx_A 137 VLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFGAP 214 (230)
T ss_dssp TTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHTSS
T ss_pred HHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhCCC
Confidence 0 0 1123344454431 1158999999998 7899899999999999999988653
No 80
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.44 E-value=1.8e-06 Score=80.05 Aligned_cols=110 Identities=21% Similarity=0.218 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhhcCCcEEeeeecCCC---------cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 50 YLRDLIRKTRSLTERPFGVGVVLAFP---------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 50 ~l~~~i~~~r~~~~~P~gvnl~~~~~---------~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
-+.+.++.+|+..+.|++|.+..... ..+.++.+.+.|++.|.++.|.... ...... ....+
T Consensus 196 ~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~--------~~~~~~-~~~~~ 266 (340)
T 3gr7_A 196 FLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP--------ARMNVY-PGYQV 266 (340)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC--------CCCCCC-TTTTH
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC--------CCCCCC-ccccH
Confidence 46677888898889999999987521 1466788888999999998654211 000000 01145
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
.++.++++.+ ++|||+.|||.|++++.++|..| ||+|++|+.|+..++
T Consensus 267 ~~~~~ik~~~---~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPd 315 (340)
T 3gr7_A 267 PFAELIRREA---DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPY 315 (340)
T ss_dssp HHHHHHHHHT---TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTT
T ss_pred HHHHHHHHHc---CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCch
Confidence 6778888887 79999999999999999999999 999999999998743
No 81
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.44 E-value=1.9e-06 Score=74.03 Aligned_cols=136 Identities=18% Similarity=0.271 Sum_probs=88.5
Q ss_pred HHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHH
Q 022271 26 ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLE 105 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~ 105 (300)
+.+.+..++| +..+... ..+++.+ +.++++++..+.|+-|+.-.. .+.+.++.+.+.|++.|.+ |....++++.
T Consensus 23 ~~~~~~~~~G-~~~i~l~-~~~~~~~-~~i~~i~~~~~~~l~vg~g~~-~~~~~i~~a~~~Gad~V~~--~~~~~~~~~~ 96 (212)
T 2v82_A 23 AHVGAVIDAG-FDAVEIP-LNSPQWE-QSIPAIVDAYGDKALIGAGTV-LKPEQVDALARMGCQLIVT--PNIHSEVIRR 96 (212)
T ss_dssp HHHHHHHHHT-CCEEEEE-TTSTTHH-HHHHHHHHHHTTTSEEEEECC-CSHHHHHHHHHTTCCEEEC--SSCCHHHHHH
T ss_pred HHHHHHHHCC-CCEEEEe-CCChhHH-HHHHHHHHhCCCCeEEEeccc-cCHHHHHHHHHcCCCEEEe--CCCCHHHHHH
Confidence 4555555544 5555432 2344443 456666655566655533221 2457899999999999964 4445667777
Q ss_pred HHHCCCeEeec--------------------cC----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEE
Q 022271 106 AHSAGVKVVPQ--------------------DG----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 161 (300)
Q Consensus 106 ~~~~G~~v~~~--------------------~~----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~ 161 (300)
.++.|..++.. .+ .+..+.++++.+. .++||++.|||. .+++.+++.+||++|.
T Consensus 97 ~~~~g~~~~~g~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~-~~ipvia~GGI~-~~~i~~~~~~Ga~gv~ 174 (212)
T 2v82_A 97 AVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLP-SDIAVFAVGGVT-PENLAQWIDAGCAGAG 174 (212)
T ss_dssp HHHTTCEEECEECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSC-TTCEEEEESSCC-TTTHHHHHHHTCSEEE
T ss_pred HHHcCCCEEeecCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhcc-CCCeEEEeCCCC-HHHHHHHHHcCCCEEE
Confidence 77777664421 10 1244555555441 149999999997 9999999999999999
Q ss_pred eccccccC
Q 022271 162 LGTRFVAS 169 (300)
Q Consensus 162 ~GT~fl~t 169 (300)
+||.|+.+
T Consensus 175 vGsai~~~ 182 (212)
T 2v82_A 175 LGSDLYRA 182 (212)
T ss_dssp ECTTTCCT
T ss_pred EChHHhCC
Confidence 99999876
No 82
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.44 E-value=4.5e-06 Score=73.49 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=90.8
Q ss_pred cHHHHHHHHhCCceE--EecCC-CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC---C
Q 022271 24 GPELVAAVANAGGLG--LLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG---E 97 (300)
Q Consensus 24 ~~~la~avs~aGglG--~i~~~-~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G---~ 97 (300)
..+++.+..++|.=. +.... .+.......+.++++++.++.|+-+|.... +.+.++.+++.|++.|.+... .
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~--~~~~~~~~~~~Gad~V~lg~~~l~~ 109 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIH--DFETASELILRGADKVSINTAAVEN 109 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCC--SHHHHHHHHHTTCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCC--CHHHHHHHHHcCCCEEEEChHHHhC
Confidence 358888888887522 22111 111223345667888887888988876553 234466666666666554210 0
Q ss_pred ------------------------------------------CcHHHHHHHHHCCCe-Ee-ec---c-----ChhchHHH
Q 022271 98 ------------------------------------------YSEELVLEAHSAGVK-VV-PQ---D-----GLISLLPM 125 (300)
Q Consensus 98 ------------------------------------------~~~~~v~~~~~~G~~-v~-~~---~-----~~~~ll~~ 125 (300)
.+.+.++.+.+.|+. ++ +. . ..+.++.+
T Consensus 110 p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~ 189 (253)
T 1thf_D 110 PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRF 189 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHH
T ss_pred hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHH
Confidence 122344444455533 22 11 1 13567777
Q ss_pred HHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 126 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 126 v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++.+ ++|||+.|||.+.+++.+++..|||+|++||+|+..+
T Consensus 190 l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~~~ 231 (253)
T 1thf_D 190 VRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 231 (253)
T ss_dssp HGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTC
T ss_pred HHHhc---CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHcCC
Confidence 77765 7999999999999999999999999999999999753
No 83
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.42 E-value=8.4e-07 Score=78.90 Aligned_cols=156 Identities=18% Similarity=0.252 Sum_probs=100.0
Q ss_pred CCcHHHHHHHHhCCceEEecCCC-------------CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCC
Q 022271 22 ISGPELVAAVANAGGLGLLRAPD-------------WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKV 88 (300)
Q Consensus 22 ~s~~~la~avs~aGglG~i~~~~-------------~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~ 88 (300)
+.+++.|...-+||...+....+ +.+|+ .|+++++..+.|+--.... .+...++.+.+.|+
T Consensus 18 v~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~----~I~~I~~aVsIPVm~k~ri--gh~~EAqilea~Ga 91 (291)
T 3o07_A 18 VVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPK----MIKDIMNSVSIPVMAKVRI--GHFVEAQIIEALEV 91 (291)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHH----HHHHHHTTCSSCEEEEEET--TCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHH----HHHHHHHhCCCCeEEEEec--CcHHHHHHHHHcCC
Confidence 67889999888899888765421 22453 6778888888887333222 22455667777788
Q ss_pred cEEEEcCC----------------CC-------cHHHHHHHHHCCCeEeec-----------------------------
Q 022271 89 AVLQVSWG----------------EY-------SEELVLEAHSAGVKVVPQ----------------------------- 116 (300)
Q Consensus 89 ~~i~~~~G----------------~~-------~~~~v~~~~~~G~~v~~~----------------------------- 116 (300)
|+|.-+-. .| ..+...++ +.|..++-+
T Consensus 92 D~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri-~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~ 170 (291)
T 3o07_A 92 DYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRI-NEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQL 170 (291)
T ss_dssp SEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHH-HCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 87743211 11 11222222 234444332
Q ss_pred -------------cChhchHHHHHHhhCCCCCcE--EEccCCCChHHHHHHHHCCCcEEEeccccccCcccC-CCHHHHH
Q 022271 117 -------------DGLISLLPMVVDLIGDRDIPI--IAAGGIVDARGYVAALSLGAQGICLGTRFVASEESY-AHPEYKR 180 (300)
Q Consensus 117 -------------~~~~~ll~~v~~~~~~~~iPV--iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~-~~~~~k~ 180 (300)
...+.++.++++.. ++|| |++|||.|++++..++.+|||||++|+..+.+..-. ....|++
T Consensus 171 ~t~~el~~~a~~~~ad~elI~~Ike~~---~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~ 247 (291)
T 3o07_A 171 KSEDDIAKVAEEMRVPVSLLKDVLEKG---KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVE 247 (291)
T ss_dssp CCHHHHHHHHHHHTSCHHHHHHHHHHT---SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred CCHHHhhhcccccCCCHHHHHHHHHcc---CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 12356788888776 7898 569999999999999999999999999999864311 2344555
Q ss_pred HHHcCCC
Q 022271 181 KLVEMDK 187 (300)
Q Consensus 181 ~i~~a~~ 187 (300)
++...++
T Consensus 248 Av~~~~~ 254 (291)
T 3o07_A 248 ATTHFDN 254 (291)
T ss_dssp HHHTTTC
T ss_pred HHHhccC
Confidence 5555444
No 84
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.42 E-value=9.2e-06 Score=70.94 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=94.8
Q ss_pred cHHHHHHHHhCCceEEe--cC-CCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC---C
Q 022271 24 GPELVAAVANAGGLGLL--RA-PDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG---E 97 (300)
Q Consensus 24 ~~~la~avs~aGglG~i--~~-~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G---~ 97 (300)
..+++.++.++|.=.+. .. ..........+.++++++.++.|+-++.... ..+.++.+++.|++.|.+... .
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~--~~~~~~~~~~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVR--SLEDATTLFRAGADKVSVNTAAVRN 112 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCC--SHHHHHHHHHHTCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCC--CHHHHHHHHHcCCCEEEEChHHhhC
Confidence 35788888887743221 11 0112333445678888887888987766543 344556666777777765321 0
Q ss_pred C------------------------------------------cHHHHHHHHHCCCeEeec-----c-----ChhchHHH
Q 022271 98 Y------------------------------------------SEELVLEAHSAGVKVVPQ-----D-----GLISLLPM 125 (300)
Q Consensus 98 ~------------------------------------------~~~~v~~~~~~G~~v~~~-----~-----~~~~ll~~ 125 (300)
| +.+.++.+.+.|+..+.. . ..+.++.+
T Consensus 113 ~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~ 192 (253)
T 1h5y_A 113 PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRR 192 (253)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHH
Confidence 0 122333333333332211 0 12456777
Q ss_pred HHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHH
Q 022271 126 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 183 (300)
Q Consensus 126 v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~ 183 (300)
+++.+ ++||++.|||.+.+++.+++.+|||+|++||.|+.... ..+..++.+.
T Consensus 193 l~~~~---~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~~~~--~~~~~~~~l~ 245 (253)
T 1h5y_A 193 VADSV---RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHFRVL--SIAQVKRYLK 245 (253)
T ss_dssp HHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSS--CHHHHHHHHH
T ss_pred HHHhc---CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 77775 79999999999999999999999999999999987542 2344555543
No 85
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.41 E-value=9.4e-07 Score=78.99 Aligned_cols=150 Identities=17% Similarity=0.282 Sum_probs=96.6
Q ss_pred CCccceecCCCCCCCCcH-HHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHh-h-cCCcEEeeeecCC-----C-c--
Q 022271 8 GFEYGIVQAPLGPDISGP-ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRS-L-TERPFGVGVVLAF-----P-H-- 76 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~-~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~-~-~~~P~gvnl~~~~-----~-~-- 76 (300)
-+++|++++||. +..++ +++.+..+.|.-+++.. +. .++.+++ . .+.|+.+++.... + .
T Consensus 31 ~id~~~~l~p~~-~~~~~~~~~~~~~~~g~~~i~~~-----~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~ 100 (273)
T 2qjg_A 31 PMDHGVSNGPIK-GLIDIRKTVNDVAEGGANAVLLH-----KG----IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKV 100 (273)
T ss_dssp ECCHHHHHCSCT-TSSSHHHHHHHHHHHTCSEEEEC-----HH----HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCE
T ss_pred EcccccccCCCc-chhhHHHHHHHHHhcCCCEEEeC-----HH----HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccch
Confidence 378999999998 78776 68888888887666532 21 2222222 1 2457777765432 1 1
Q ss_pred -HHHHHHHHHcCCcEE--EEcCCCCcH--------HHHHHHHHCCCeEee------------------------------
Q 022271 77 -NENIKAILSEKVAVL--QVSWGEYSE--------ELVLEAHSAGVKVVP------------------------------ 115 (300)
Q Consensus 77 -~~~~~~~~e~g~~~i--~~~~G~~~~--------~~v~~~~~~G~~v~~------------------------------ 115 (300)
.+.++.+++.|++.| .+..|.++. ++++.+++.|+.++.
T Consensus 101 ~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Ga 180 (273)
T 2qjg_A 101 IVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGA 180 (273)
T ss_dssp ECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCC
Confidence 345667777777777 444444321 234444555655442
Q ss_pred ----c--cChhchHHHHHHhhCCCCCcEEEccCCCC--hHH----HHHHHHCCCcEEEeccccccCc
Q 022271 116 ----Q--DGLISLLPMVVDLIGDRDIPIIAAGGIVD--ARG----YVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 116 ----~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~--g~~----v~aal~lGAdgV~~GT~fl~t~ 170 (300)
. ...+.++.++++.+ ++||++.|||.+ .++ +.+++..||+||.+||.++..+
T Consensus 181 d~i~~~~~~~~~~l~~i~~~~---~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~ 244 (273)
T 2qjg_A 181 DIVKTSYTGDIDSFRDVVKGC---PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHD 244 (273)
T ss_dssp SEEEECCCSSHHHHHHHHHHC---SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSS
T ss_pred CEEEECCCCCHHHHHHHHHhC---CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCC
Confidence 1 12345666777665 799999999995 667 6667789999999999998764
No 86
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.37 E-value=6.9e-06 Score=72.26 Aligned_cols=142 Identities=22% Similarity=0.292 Sum_probs=89.7
Q ss_pred cHHHHHHHHhCCceE--EecCC-CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCC---C
Q 022271 24 GPELVAAVANAGGLG--LLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWG---E 97 (300)
Q Consensus 24 ~~~la~avs~aGglG--~i~~~-~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G---~ 97 (300)
..+++.+..++|.=. +.... .........+.++++++.++.|+-++-... +.+.++.+++.|++.|.+... .
T Consensus 33 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~--~~~~~~~~~~~Gad~V~lg~~~l~~ 110 (252)
T 1ka9_F 33 PVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVR--SLEDARKLLLSGADKVSVNSAAVRR 110 (252)
T ss_dssp HHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCC--SHHHHHHHHHHTCSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcC--CHHHHHHHHHcCCCEEEEChHHHhC
Confidence 347888877777422 22110 112333445678888887888887643332 345555566666665544210 0
Q ss_pred ------------------------------------------CcHHHHHHHHHCCCeEe--ec---cC-----hhchHHH
Q 022271 98 ------------------------------------------YSEELVLEAHSAGVKVV--PQ---DG-----LISLLPM 125 (300)
Q Consensus 98 ------------------------------------------~~~~~v~~~~~~G~~v~--~~---~~-----~~~ll~~ 125 (300)
.+.+.++++.+.|+..+ +. .+ .+.++.+
T Consensus 111 p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~ 190 (252)
T 1ka9_F 111 PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRM 190 (252)
T ss_dssp THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHH
T ss_pred cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHH
Confidence 01233444444444321 11 11 3668888
Q ss_pred HHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 126 VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 126 v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++.+ ++|||+.|||.+.+++.+++..|||||++|++|+..+
T Consensus 191 l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~ 232 (252)
T 1ka9_F 191 VAEAV---GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGE 232 (252)
T ss_dssp HHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTS
T ss_pred HHHHc---CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCC
Confidence 88887 7999999999999999999999999999999998764
No 87
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.36 E-value=3.4e-06 Score=73.76 Aligned_cols=112 Identities=14% Similarity=0.220 Sum_probs=85.0
Q ss_pred HHHHHHhh--cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC--CcHHHHHHHHHCCCeEeec-------------
Q 022271 54 LIRKTRSL--TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSAGVKVVPQ------------- 116 (300)
Q Consensus 54 ~i~~~r~~--~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~--~~~~~v~~~~~~G~~v~~~------------- 116 (300)
.++++|+. ++.|+-+.|+...|. .+++.+.+.|++.|.++.-. -....++.+++.|.++...
T Consensus 53 ~v~~ir~~~~~~~~~dvhLmv~~p~-~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~ 131 (228)
T 3ovp_A 53 VVESLRKQLGQDPFFDMHMMVSKPE-QWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPW 131 (228)
T ss_dssp HHHHHHHHHCSSSCEEEEEECSCGG-GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGG
T ss_pred HHHHHHHhhCCCCcEEEEEEeCCHH-HHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH
Confidence 56777777 588999999987664 57888999999999998521 2457888899999887643
Q ss_pred -------------c---------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 -------------D---------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 -------------~---------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
. ..+.-+.++++.. .+.|+.++||| +.+.+..+..+|||.+++||.+..+
T Consensus 132 l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~--~~~~I~VdGGI-~~~t~~~~~~aGAd~~VvGsaIf~a 203 (228)
T 3ovp_A 132 ANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV-GPDTVHKCAEAGANMIVSGSAIMRS 203 (228)
T ss_dssp GGGCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHC--TTCEEEEESSC-STTTHHHHHHHTCCEEEESHHHHTC
T ss_pred hccCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhc--CCCCEEEeCCc-CHHHHHHHHHcCCCEEEEeHHHhCC
Confidence 0 0222344555543 26899999999 5899999999999999999987754
No 88
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.34 E-value=3.4e-06 Score=73.57 Aligned_cols=114 Identities=14% Similarity=0.211 Sum_probs=85.0
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC--c-HHHHHHHHHCCCeEeec-------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY--S-EELVLEAHSAGVKVVPQ------------- 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~--~-~~~v~~~~~~G~~v~~~------------- 116 (300)
+.++++|+.++.|+.+.|+.+.+ .+.++.+.+.|++.|.++.+.. + .+.++.+++.|..++..
T Consensus 54 ~~~~~lr~~~~~~~~v~lmv~d~-~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~ 132 (228)
T 1h1y_A 54 PVIQSLRKHTKAYLDCHLMVTNP-SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPL 132 (228)
T ss_dssp HHHHHHHTTCCSEEEEEEESSCG-GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHH
T ss_pred HHHHHHHhhcCCcEEEEEEecCH-HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 56777888887899999999765 4468888999999999986532 3 55678888888766532
Q ss_pred -c---C---------------------hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 -D---G---------------------LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 -~---~---------------------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
. + .+..+.++++... ++||+++|||.. +.+..++..|||++.+||.++..+
T Consensus 133 ~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~--~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~~ 208 (228)
T 1h1y_A 133 VEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP--SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGAA 208 (228)
T ss_dssp HHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT--TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTSS
T ss_pred HhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC--CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCCC
Confidence 0 1 1122334444331 689999999987 789899999999999999998753
No 89
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.34 E-value=4.9e-06 Score=76.94 Aligned_cols=110 Identities=21% Similarity=0.212 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhhcCCcEEeeeecCCC------c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccCh
Q 022271 49 DYLRDLIRKTRSLTERPFGVGVVLAFP------H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGL 119 (300)
Q Consensus 49 ~~l~~~i~~~r~~~~~P~gvnl~~~~~------~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~ 119 (300)
..+.+.++.+|+..+.|++|.+..... . .+.++.+.+.|++.|.++.|... ...... ...-.
T Consensus 195 r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~--------~~~~~~-~~~~~ 265 (338)
T 1z41_A 195 RFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALV--------HADINV-FPGYQ 265 (338)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSS--------CCCCCC-CTTTT
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccc--------cCCCCC-Cccch
Confidence 346777888888779999999877421 1 35677778899999999865421 000000 00113
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
+.++.++++.+ ++||++.|||.|++++.+++..| ||+|++|+.|+..+
T Consensus 266 ~~~~~~ir~~~---~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nP 314 (338)
T 1z41_A 266 VSFAEKIREQA---DMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDP 314 (338)
T ss_dssp HHHHHHHHHHH---CCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCT
T ss_pred HHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCc
Confidence 56778888888 79999999999999999999999 99999999999864
No 90
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.33 E-value=2.7e-06 Score=73.40 Aligned_cols=145 Identities=12% Similarity=0.172 Sum_probs=95.5
Q ss_pred CcHHHHHHHHhCCc--eEEec-CCCC-CCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC-
Q 022271 23 SGPELVAAVANAGG--LGLLR-APDW-EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE- 97 (300)
Q Consensus 23 s~~~la~avs~aGg--lG~i~-~~~~-~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~- 97 (300)
+..+.+..+.++|. +++.- .+.+ .....-.+.++++|+.++.|+.+.++.+.+. +.++.+.+.|++.|.++.+.
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~-~~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPE-RYVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGG-GGHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHH-HHHHHHHHcCCCEEEEccCcc
Confidence 44566667777774 33321 1111 1101112567778887888999999887653 35699999999999997532
Q ss_pred -CcHHHHHHHHHCCCeEeec-----------------------------cC------hhchHHHHHHhhC--CCCCcEEE
Q 022271 98 -YSEELVLEAHSAGVKVVPQ-----------------------------DG------LISLLPMVVDLIG--DRDIPIIA 139 (300)
Q Consensus 98 -~~~~~v~~~~~~G~~v~~~-----------------------------~~------~~~ll~~v~~~~~--~~~iPVia 139 (300)
.+...++.+++.|.+++.. .+ .+..+.++++... ..++||++
T Consensus 96 ~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v 175 (220)
T 2fli_A 96 RHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV 175 (220)
T ss_dssp SCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE
T ss_pred ccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 2456677788778765532 00 1122444544431 11589999
Q ss_pred ccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 140 AGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 140 aGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+|||. .+.+.+++.+|||+|.+||++...
T Consensus 176 ~GGI~-~~~~~~~~~~Gad~vvvGsai~~~ 204 (220)
T 2fli_A 176 DGGVD-NKTIRACYEAGANVFVAGSYLFKA 204 (220)
T ss_dssp ESSCC-TTTHHHHHHHTCCEEEESHHHHTS
T ss_pred ECcCC-HHHHHHHHHcCCCEEEEChHHhCC
Confidence 99999 789999999999999999999876
No 91
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.33 E-value=2e-05 Score=69.40 Aligned_cols=165 Identities=13% Similarity=0.112 Sum_probs=103.2
Q ss_pred CccccccCCccceecCCCCCCCCcHHHHHHHHhCCc-eEEecCCCCCCHHHHHHHHHHHHhhcCCcEEe-----eeecCC
Q 022271 1 MGWRGMLGFEYGIVQAPLGPDISGPELVAAVANAGG-LGLLRAPDWEAPDYLRDLIRKTRSLTERPFGV-----GVVLAF 74 (300)
Q Consensus 1 ~~~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGg-lG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gv-----nl~~~~ 74 (300)
|++.+.-.-+|=....|=- -.+.+++.++.++|. +=.++.....+.+.+.+.++++|+ ++.|+.+ |.+...
T Consensus 1 ~~~~~~~~~~~i~~gDP~~--~~t~~~~~~l~~~GaD~ielG~S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G 77 (240)
T 1viz_A 1 MSLYDVTEWKHVFKLDPNK--DLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPG 77 (240)
T ss_dssp -CCSCGGGCCEEEEECTTS--CCCHHHHHHHHTSCCSEEEECC----CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSC
T ss_pred CCccccCcceEEEeeCCCc--cccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCC
Confidence 5554444455655666742 356777888888885 111221223688989999999999 7888754 333211
Q ss_pred ---------Cc---HH-----HHHHHHHcC-----CcEEE----Ec-C---------CC--CcHHHHHHHHHCC----Ce
Q 022271 75 ---------PH---NE-----NIKAILSEK-----VAVLQ----VS-W---------GE--YSEELVLEAHSAG----VK 112 (300)
Q Consensus 75 ---------~~---~~-----~~~~~~e~g-----~~~i~----~~-~---------G~--~~~~~v~~~~~~G----~~ 112 (300)
++ .+ +.+.+.+++ .+.|. +- - +. ..++.+....+.| ..
T Consensus 78 ~dg~iiPdLp~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~ 157 (240)
T 1viz_A 78 FDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLP 157 (240)
T ss_dssp CSEEEEEEETTBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCS
T ss_pred CCEEEEcccCcccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCC
Confidence 11 22 256777777 77665 31 1 10 0123444444333 23
Q ss_pred Eeec-----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 113 VVPQ-----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 113 v~~~-----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
++.. .+...++.++++.+. ++||++.|||+|++++.+++. |||+|++||+++-..|
T Consensus 158 ~VYl~s~G~~~~~~~i~~i~~~~~--~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~~~ 218 (240)
T 1viz_A 158 IFYLEYSGVLGDIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYEDFD 218 (240)
T ss_dssp EEEEECTTSCCCHHHHHHHHHTCS--SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHCHH
T ss_pred EEEEeCCCccChHHHHHHHHHhcC--CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhCHH
Confidence 3322 234678888887652 699999999999999999999 9999999999997644
No 92
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=98.32 E-value=4.4e-06 Score=72.86 Aligned_cols=100 Identities=15% Similarity=0.209 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC---c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP---H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~---~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++++++++..+ |+.++++...+ . .+..+.+.+.|+++|-++.|.. .| -.++
T Consensus 100 ~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~----------~g------ga~~ 162 (225)
T 1mzh_A 100 KYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFA----------PR------GTTL 162 (225)
T ss_dssp CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCS----------SS------CCCH
T ss_pred ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCC----------CC------CCCH
Confidence 56777788999998877 88888854322 1 3456788889999997776531 11 1256
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
..+.++++.+.. ++||+++|||.|++++.+++.+|||.|.+++
T Consensus 163 ~~i~~v~~~v~~-~ipVia~GGI~t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 163 EEVRLIKSSAKG-RIKVKASGGIRDLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp HHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHHhCC-CCcEEEECCCCCHHHHHHHHHhCchHHHHcc
Confidence 677778877632 6999999999999999999999999665543
No 93
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.31 E-value=2.9e-06 Score=75.38 Aligned_cols=48 Identities=27% Similarity=0.423 Sum_probs=41.7
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+.++.++++.+ ++|||+.|||.+++++.+++..|||||++||+|+..+
T Consensus 189 ~~~i~~l~~~~---~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~~ 236 (266)
T 2w6r_A 189 TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFRE 236 (266)
T ss_dssp HHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC---
T ss_pred HHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcCC
Confidence 67788888776 8999999999999999999999999999999998764
No 94
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.29 E-value=6.8e-06 Score=72.63 Aligned_cols=115 Identities=13% Similarity=0.157 Sum_probs=87.4
Q ss_pred HHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC--CcHHHHHHHHHCCCeEeec-------------
Q 022271 53 DLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE--YSEELVLEAHSAGVKVVPQ------------- 116 (300)
Q Consensus 53 ~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~--~~~~~v~~~~~~G~~v~~~------------- 116 (300)
..++.+|+.+ ++|+-+.|+...| ..+++.+.+.|++.|+++.-. -+...++.+++.|+++...
T Consensus 75 ~~v~~lr~~~p~~~ldvHLmv~~p-~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~ 153 (246)
T 3inp_A 75 MVLKALRDYGITAGMDVHLMVKPV-DALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYV 153 (246)
T ss_dssp HHHHHHHHHTCCSCEEEEEECSSC-HHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTT
T ss_pred HHHHHHHHhCCCCeEEEEEeeCCH-HHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence 3677778888 8999999998776 457899999999999997522 2467889999999887643
Q ss_pred ----------------------cChhchHHHHHHhhC--CCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 ----------------------DGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 ----------------------~~~~~ll~~v~~~~~--~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
...+.-+.++++... +.+++|.+.|||. .+.+..+..+|||.+++||.+..+
T Consensus 154 l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a 229 (246)
T 3inp_A 154 ESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS 229 (246)
T ss_dssp GGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS
T ss_pred HhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC
Confidence 012333445554432 1358999999998 678999999999999999987655
No 95
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.25 E-value=3.5e-06 Score=73.88 Aligned_cols=140 Identities=18% Similarity=0.226 Sum_probs=87.8
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEecCC-CCCCHHHHHHHHHHHHhhcCCcEEeeee-------cCC-----C
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVV-------LAF-----P 75 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~-~~~~~~~l~~~i~~~r~~~~~P~gvnl~-------~~~-----~ 75 (300)
...|++. ++ |+.+.+-+..+-++|.=+++-.. .+.+|+.+.+. ++..+ ...+++..- .+. .
T Consensus 72 ~~ipvi~--~G-gi~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~-~~~g~--~i~~~~d~~~~~v~~~g~~~~~~~~ 145 (241)
T 1qo2_A 72 FAEHIQI--GG-GIRSLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL-REIDV--EPVFSLDTRGGRVAFKGWLAEEEID 145 (241)
T ss_dssp GGGGEEE--ES-SCCSHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH-HTTTC--EEEEEEEEETTEECCTTCSSCSCCC
T ss_pred cCCcEEE--EC-CCCCHHHHHHHHHCCCCEEEECchHhhChHHHHHH-HHcCC--cEEEEEEecCCEEEECCceecCCCC
Confidence 3568885 34 67887777777777866654221 11234333333 22210 112334331 011 2
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+.|+..|.++ +. .++ ....| ..+.++.++++.+ ++|||+.|||.+.+++.+++.+
T Consensus 146 ~~e~~~~~~~~G~~~i~~t-~~-~~~----g~~~g-------~~~~~i~~l~~~~---~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 146 PVSLLKRLKEYGLEEIVHT-EI-EKD----GTLQE-------HDFSLTKKIAIEA---EVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp HHHHHHHHHTTTCCEEEEE-ET-THH----HHTCC-------CCHHHHHHHHHHH---TCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEE-ee-ccc----ccCCc-------CCHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHhc
Confidence 2455677778888877664 22 111 11122 2478889999888 7999999999999999999998
Q ss_pred -----C-CcEEEeccccccCc
Q 022271 156 -----G-AQGICLGTRFVASE 170 (300)
Q Consensus 156 -----G-AdgV~~GT~fl~t~ 170 (300)
| ||||++||+|+..+
T Consensus 210 ~~~~~G~adgv~vgsal~~~~ 230 (241)
T 1qo2_A 210 HTETNGLLKGVIVGRAFLEGI 230 (241)
T ss_dssp HHHTTTSEEEEEECHHHHTTS
T ss_pred ccccCCeEeEEEeeHHHHcCC
Confidence 9 99999999998763
No 96
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.23 E-value=1.5e-05 Score=74.06 Aligned_cols=111 Identities=16% Similarity=0.118 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhc--CCcEEeeeecCC------Cc---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccC
Q 022271 50 YLRDLIRKTRSLT--ERPFGVGVVLAF------PH---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDG 118 (300)
Q Consensus 50 ~l~~~i~~~r~~~--~~P~gvnl~~~~------~~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~ 118 (300)
.+.+.++.+|+.. +.|++|.+-... .. .+.++.+.+.|++.|.++.|..... ..... ...-
T Consensus 204 ~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~-------~~~~~-~~~~ 275 (349)
T 3hgj_A 204 FPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLR-------VRIPL-APGF 275 (349)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSS-------SCCCC-CTTT
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcc-------cccCC-Cccc
Confidence 4567788888876 689999988642 11 3456777889999999885432110 00000 0011
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
.+.++.++++.+ ++||++.|||.|++++.+++..| ||.|++|+.|+..++
T Consensus 276 ~~~~~~~ir~~~---~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPd 326 (349)
T 3hgj_A 276 QVPFADAVRKRV---GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPY 326 (349)
T ss_dssp THHHHHHHHHHH---CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTT
T ss_pred cHHHHHHHHHHc---CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCch
Confidence 456778888887 79999999999999999999999 999999999998643
No 97
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=98.22 E-value=1.2e-05 Score=70.51 Aligned_cols=115 Identities=13% Similarity=0.187 Sum_probs=87.8
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC---CcHHHHHHHHHCCCeEeec-------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE---YSEELVLEAHSAGVKVVPQ------------- 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~---~~~~~v~~~~~~G~~v~~~------------- 116 (300)
..++.+|+.+++|+-+-|+...| ..+++.+.+.|++.|+++.-. .+...++.+++.|.++...
T Consensus 47 ~~v~~lr~~~~~~~dvhLmv~dp-~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~ 125 (231)
T 3ctl_A 47 FFVSQVKKLATKPLDCHLMVTRP-QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYY 125 (231)
T ss_dssp HHHHHHHTTCCSCEEEEEESSCG-GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTT
T ss_pred HHHHHHHhccCCcEEEEEEecCH-HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHH
Confidence 47888899899999999999875 446799999999999988644 2467888899999887643
Q ss_pred ----------------------cChhchHHHHHHhhC--CCCCcEEEccCCCChHHHHHHHHCCCcEEEec-cccccC
Q 022271 117 ----------------------DGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYVAALSLGAQGICLG-TRFVAS 169 (300)
Q Consensus 117 ----------------------~~~~~ll~~v~~~~~--~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G-T~fl~t 169 (300)
...+.-+.++++..+ +.+++|.+.|||. .+.+..+...|||.+++| |.+...
T Consensus 126 l~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~ 202 (231)
T 3ctl_A 126 IHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH 202 (231)
T ss_dssp GGGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG
T ss_pred HhcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC
Confidence 012334455555542 1268999999997 568889999999999999 666543
No 98
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.22 E-value=4.1e-06 Score=73.94 Aligned_cols=49 Identities=31% Similarity=0.496 Sum_probs=39.4
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+..+.++++... .++||++.||| +.+++..++..||+||.+|+.|+.++
T Consensus 178 l~~l~~~~~~~~-~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~sai~~a~ 226 (243)
T 3o63_A 178 LGLVRVAAELGG-DDKPWFAIGGI-NAQRLPAVLDAGARRIVVVRAITSAD 226 (243)
T ss_dssp HHHHHHHHTC----CCCEEEESSC-CTTTHHHHHHTTCCCEEESHHHHTCS
T ss_pred HHHHHHHHHhcc-CCCCEEEecCC-CHHHHHHHHHcCCCEEEEeHHHhCCC
Confidence 345666655410 27999999999 99999999999999999999999764
No 99
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.21 E-value=2.9e-05 Score=70.86 Aligned_cols=66 Identities=26% Similarity=0.395 Sum_probs=50.3
Q ss_pred hhchHHHHHHhhCCCCCcE--EEccCCCChHHHHHHHHCCCcEEEeccccccCccc-CCCHHHHHHHHcCCC
Q 022271 119 LISLLPMVVDLIGDRDIPI--IAAGGIVDARGYVAALSLGAQGICLGTRFVASEES-YAHPEYKRKLVEMDK 187 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPV--iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es-~~~~~~k~~i~~a~~ 187 (300)
.+.+++++.+.. ++|| |+.|||.+++++..++.+|||||++|+.++.+..- .....+++++...++
T Consensus 228 ~lell~~i~~~~---~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~~~ 296 (330)
T 2yzr_A 228 LYEVLLEVKKLG---RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNYDK 296 (330)
T ss_dssp HHHHHHHHHHHT---SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHhC---CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhcCC
Confidence 347888888766 7898 69999999999999999999999999999975321 123445555554444
No 100
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.20 E-value=1.6e-05 Score=69.52 Aligned_cols=133 Identities=23% Similarity=0.281 Sum_probs=93.3
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHH
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v 103 (300)
.+++.++.++| +..+-. .+.+++.+ +.|+++++.. +.-+|.+-+ .+.++++.+++.|+++|... +. ..+++
T Consensus 49 ~~~a~al~~gG-i~~iEv-t~~t~~a~-e~I~~l~~~~~~~~iGaGTV---lt~~~a~~Ai~AGA~fIvsP-~~-~~~vi 120 (232)
T 4e38_A 49 IPLGKVLAENG-LPAAEI-TFRSDAAV-EAIRLLRQAQPEMLIGAGTI---LNGEQALAAKEAGATFVVSP-GF-NPNTV 120 (232)
T ss_dssp HHHHHHHHHTT-CCEEEE-ETTSTTHH-HHHHHHHHHCTTCEEEEECC---CSHHHHHHHHHHTCSEEECS-SC-CHHHH
T ss_pred HHHHHHHHHCC-CCEEEE-eCCCCCHH-HHHHHHHHhCCCCEEeECCc---CCHHHHHHHHHcCCCEEEeC-CC-CHHHH
Confidence 46777766654 555533 13455543 5677777653 344666544 35889999999999999765 33 56788
Q ss_pred HHHHHCCCeEeec--------------------cC-----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCc
Q 022271 104 LEAHSAGVKVVPQ--------------------DG-----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ 158 (300)
Q Consensus 104 ~~~~~~G~~v~~~--------------------~~-----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAd 158 (300)
+.+++.|+.+++. .+ -..++..++..+ .++|+++.|||. .+.+..+|++||.
T Consensus 121 ~~~~~~gi~~ipGv~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~--p~ip~~ptGGI~-~~n~~~~l~aGa~ 197 (232)
T 4e38_A 121 RACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPY--GDIRLMPTGGIT-PSNIDNYLAIPQV 197 (232)
T ss_dssp HHHHHHTCEEECEECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTC--TTCEEEEBSSCC-TTTHHHHHTSTTB
T ss_pred HHHHHcCCCEEcCCCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHh--cCCCeeeEcCCC-HHHHHHHHHCCCe
Confidence 8888888888764 11 134555555444 279999999995 8999999999999
Q ss_pred EEEecccccc
Q 022271 159 GICLGTRFVA 168 (300)
Q Consensus 159 gV~~GT~fl~ 168 (300)
++..||.+.-
T Consensus 198 ~~vgGs~l~~ 207 (232)
T 4e38_A 198 LACGGTWMVD 207 (232)
T ss_dssp CCEEECGGGC
T ss_pred EEEECchhcC
Confidence 9988887654
No 101
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=98.20 E-value=2.1e-05 Score=66.33 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHhhcCCcEEeeeec---CCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----c----
Q 022271 49 DYLRDLIRKTRSLTERPFGVGVVL---AFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----D---- 117 (300)
Q Consensus 49 ~~l~~~i~~~r~~~~~P~gvnl~~---~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~---- 117 (300)
..|.+.++++|+. ++|.-|+.=. -.+++..++.+...+++.|..+ ....+..+++.|...++. +
T Consensus 43 ~~L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIsT----k~~~i~~Akk~GL~tIqR~FliDs~al 117 (188)
T 1vkf_A 43 LNLKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIITI----KPKNYVVAKKNGIPAVLRFFALDSKAV 117 (188)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEES----CHHHHHHHHHTTCCEEEEEECCSHHHH
T ss_pred HHHHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEcC----cHHHHHHHHHcCCEEeeEEEEEEeHHH
Confidence 3588889999887 8887775422 2346777888866799988775 245788889999888764 0
Q ss_pred -----------C----hh-ch-HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 118 -----------G----LI-SL-LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 118 -----------~----~~-~l-l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+ .+ .. .|++.+.+ .++|||++|+|.|.+++.+ +..||++|..|++=|+..
T Consensus 118 ~~~~~~I~~~kPD~iEiLPg~v~p~~I~~v--~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 118 ERGIEQIETLGVDVVEVLPGAVAPKVARKI--PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWKM 184 (188)
T ss_dssp HHHHHHHHHHTCSEEEEESGGGHHHHHTTS--TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHTC
T ss_pred hhhhhhccccCCCeEeecCCCchHHHHHHh--cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhCC
Confidence 0 11 13 56777666 4899999999999999999 999999999999887754
No 102
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.19 E-value=1.8e-05 Score=68.94 Aligned_cols=154 Identities=15% Similarity=0.069 Sum_probs=97.5
Q ss_pred ccceecCCCCCCCCcHHHHHHHHhCCceEEecCCC-CCCHHHHHHHHHHHHhhcCCcEEeeeecCC--------------
Q 022271 10 EYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD-WEAPDYLRDLIRKTRSLTERPFGVGVVLAF-------------- 74 (300)
Q Consensus 10 ~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~-~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~-------------- 74 (300)
+|=....|=- ..+.+...+++++|.=.++-.+. ..+.+.+.+.++++|+ ++.|+-+ +..+.
T Consensus 8 ~h~~~iDPdk--~~~~~~~~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~-~~~Pvvl-fp~~~~~v~~gaD~~l~ps 83 (228)
T 3vzx_A 8 KHVFKLDPNK--DLPDEQLEILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR-FLVPCVL-EVSAIEAIVPGFDLYFIPS 83 (228)
T ss_dssp CEEEEECTTS--CCCTTHHHHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT-SSSCEEE-ECSCGGGCCSCCSEEEEEE
T ss_pred eEEEeECCCC--CCCHHHHHHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc-cCCCEEE-eCCCHHHccccCCEEEEee
Confidence 3444455632 23335566678888655443222 2578999999999998 8888743 11110
Q ss_pred ----Cc-----HHHHHHHHHcCC-----cEEE-----EcCCCC------------cHHHHHHHH---HCCCeEeec----
Q 022271 75 ----PH-----NENIKAILSEKV-----AVLQ-----VSWGEY------------SEELVLEAH---SAGVKVVPQ---- 116 (300)
Q Consensus 75 ----~~-----~~~~~~~~e~g~-----~~i~-----~~~G~~------------~~~~v~~~~---~~G~~v~~~---- 116 (300)
.+ ..+.+.+.+.|. .+|. ++-++. ++++..... -.|.+++..
T Consensus 84 lln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~VYld~sG 163 (228)
T 3vzx_A 84 VLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSG 163 (228)
T ss_dssp ETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTT
T ss_pred ecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEECCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 01 345577777775 6654 222221 122222222 234555433
Q ss_pred -cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 -DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 -~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
.+...++.++++.++ ++||++.|||+|++++.+++ .|||+|++||++.-.+
T Consensus 164 ~~~~~~~i~~i~~~~~--~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~~p 215 (228)
T 3vzx_A 164 VLGDIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYEDF 215 (228)
T ss_dssp SCCCHHHHHHHHHHCS--SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHHCH
T ss_pred CcCCHHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhcCH
Confidence 235778888888762 59999999999999999988 7999999999998753
No 103
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.18 E-value=2.1e-05 Score=68.89 Aligned_cols=151 Identities=17% Similarity=0.125 Sum_probs=95.6
Q ss_pred ecCCCCCCCCcHHHHHHHHhCCceE-EecCCCCCCHHHHHHHHHHHHhhcCCcEEe-----eeecCC---------Cc--
Q 022271 14 VQAPLGPDISGPELVAAVANAGGLG-LLRAPDWEAPDYLRDLIRKTRSLTERPFGV-----GVVLAF---------PH-- 76 (300)
Q Consensus 14 i~apM~~g~s~~~la~avs~aGglG-~i~~~~~~~~~~l~~~i~~~r~~~~~P~gv-----nl~~~~---------~~-- 76 (300)
...|=- -.+.+.+.++.++|.=- .++..+..+.+.+.+.++++|+ ++.|+.+ |.+... |+
T Consensus 14 ~gDP~~--~~t~~~~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i~~gvDg~iipdLp~ee 90 (234)
T 2f6u_A 14 KLDPDR--TNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNVVYDVDYLFVPTVLNSA 90 (234)
T ss_dssp EECTTS--CCCHHHHHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCCCCCSSEEEEEEETTBS
T ss_pred eeCCCc--cccHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-CCCCEEEecCCcchhhcCCCEEEEcccCCCC
Confidence 344532 35567788888888511 1221234689999999999998 7888643 222110 11
Q ss_pred ------HHHHHHH-------HHcC-----CcEEEE----c----------CCCC--cHHHHHHHHHCCC-----eEeec-
Q 022271 77 ------NENIKAI-------LSEK-----VAVLQV----S----------WGEY--SEELVLEAHSAGV-----KVVPQ- 116 (300)
Q Consensus 77 ------~~~~~~~-------~e~g-----~~~i~~----~----------~G~~--~~~~v~~~~~~G~-----~v~~~- 116 (300)
..+.+.+ .++| .+.|.. - -|.| +++.++...+.|. .++..
T Consensus 91 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl~ 170 (234)
T 2f6u_A 91 DGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIE 170 (234)
T ss_dssp BGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEEe
Confidence 1223444 5567 777763 1 1111 2244554444332 33322
Q ss_pred ----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 117 ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 117 ----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
.+...++.++++.+. ++||++.|||+|++++.+++. |||+|++||+++-..
T Consensus 171 ~~G~~~~~~~i~~i~~~~~--~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~~ 225 (234)
T 2f6u_A 171 YSGTYGNPELVAEVKKVLD--KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKG 225 (234)
T ss_dssp CTTSCCCHHHHHHHHHHCS--SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHHC
T ss_pred CCCCcchHHHHHHHHHhCC--CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhCH
Confidence 235678888888752 699999999999999999999 999999999998654
No 104
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.12 E-value=7.8e-05 Score=65.18 Aligned_cols=154 Identities=15% Similarity=0.119 Sum_probs=96.9
Q ss_pred CccceecCCCCCCCCcHHHHHHHHhCCceEEe-cCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCC-------------
Q 022271 9 FEYGIVQAPLGPDISGPELVAAVANAGGLGLL-RAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAF------------- 74 (300)
Q Consensus 9 ~~~Pii~apM~~g~s~~~la~avs~aGglG~i-~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~------------- 74 (300)
-+|=....|=- ..+.+...+++++|.=.++ +.....+.+.+.+.++++|+ ++.|+.+ +..+.
T Consensus 12 w~h~~~~DPdk--~~~~~~l~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~-~~~Piil-~p~~~~~~~~gaD~il~p 87 (235)
T 3w01_A 12 WRHIFKLDPAK--HISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR-YPLPLVL-EISNIESVMPGFDFYFVP 87 (235)
T ss_dssp CCEEEEECTTS--CCCHHHHHHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT-SCSCEEE-ECCCSTTCCTTCSEEEEE
T ss_pred ceEEEeECCCC--cCCHHHHHHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC-cCCCEEE-ecCCHHHhhcCCCEEEEc
Confidence 34545566742 3344555567888754443 22223589999999999999 8888744 21110
Q ss_pred --C--------cHHHHHHHHHcCC-----cEEEE-----cCCCC------------cHHHHHHHH----HCCCeEeec--
Q 022271 75 --P--------HNENIKAILSEKV-----AVLQV-----SWGEY------------SEELVLEAH----SAGVKVVPQ-- 116 (300)
Q Consensus 75 --~--------~~~~~~~~~e~g~-----~~i~~-----~~G~~------------~~~~v~~~~----~~G~~v~~~-- 116 (300)
+ ...+++.+.+.|. ++|.. +-++. ++.+..... -.|...+..
T Consensus 88 slln~~~~~~i~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~ 167 (235)
T 3w01_A 88 TVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEY 167 (235)
T ss_dssp EETTBSSGGGTTHHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred cccCCCCcchhhhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEec
Confidence 0 1345677888887 77652 22211 122222211 124344332
Q ss_pred ---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 ---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.+...++.++++.+. ++||+..|||++++++.++.. |||+|++||+|.-.
T Consensus 168 sG~~g~~~~v~~ir~~~~--~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~~ 220 (235)
T 3w01_A 168 SGIYGDVSKVQAVSEHLT--ETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYKD 220 (235)
T ss_dssp TTSCCCHHHHHHHHTTCS--SSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHHC
T ss_pred CCCcCCHHHHHHHHHhcC--CCCEEEECCcCCHHHHHHHHc-CCCEEEECCceecC
Confidence 335667777777642 689999999999999998887 99999999999974
No 105
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.09 E-value=2.3e-05 Score=73.13 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC-------c-----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP-------H-----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~-------~-----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
-+.+.++.+|+..+ .|++|.+..... . .+.++.+.+.|++.|.++.|.. |
T Consensus 205 f~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-----------~------ 267 (362)
T 4ab4_A 205 LLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREA-----------D------ 267 (362)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC-----------T------
T ss_pred HHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC-----------C------
Confidence 46677888888753 399999887531 1 2346777788999999886531 1
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
. .++.++++.+ ++|||++||| |++++.+++..| ||+|.+|+.|++.++
T Consensus 268 -~--~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPd 316 (362)
T 4ab4_A 268 -D--SIGPLIKEAF---GGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPD 316 (362)
T ss_dssp -T--CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred -H--HHHHHHHHHC---CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 0 4677888888 7999999999 999999999998 999999999998753
No 106
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.08 E-value=1.2e-05 Score=75.01 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhhc--CCcEEeeeecCCC----------cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeecc
Q 022271 50 YLRDLIRKTRSLT--ERPFGVGVVLAFP----------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQD 117 (300)
Q Consensus 50 ~l~~~i~~~r~~~--~~P~gvnl~~~~~----------~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~ 117 (300)
-+.+.++.+|+.. +.|++|.+-.... ..+.++.+.+.|++.|.++.|..... ..... ...
T Consensus 210 ~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~-------~~~~~-~~~ 281 (363)
T 3l5l_A 210 FLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPD-------TNIPW-GPA 281 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC-------CCCCC-CTT
T ss_pred HHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccc-------cccCC-Ccc
Confidence 4567788888876 5789998876321 13456777889999999886542100 00000 001
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
-...++.++++.+ ++|||+.|||.|++++.+++..| ||.|++|+.|+..+
T Consensus 282 ~~~~~~~~ir~~~---~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanP 332 (363)
T 3l5l_A 282 FMGPIAERVRREA---KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADP 332 (363)
T ss_dssp TTHHHHHHHHHHH---TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCT
T ss_pred hhHHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCc
Confidence 1356777888888 79999999999999999999999 99999999999864
No 107
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.07 E-value=2.2e-05 Score=73.25 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC---------c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP---------H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~---------~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
-+.+.++.+|+..+ .|++|.+-.... . .+.++.+.+.|++.|.++.|.. |
T Consensus 213 f~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-----------~------ 275 (361)
T 3gka_A 213 LLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG-----------G------ 275 (361)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS-----------T------
T ss_pred HHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC-----------C------
Confidence 46677888888753 299999887531 1 2356777788999999886531 1
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
+ .++.++++.+ ++|||+.||| |++++.+++..| ||+|.+|+.|++.++
T Consensus 276 -~--~~~~~ik~~~---~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPd 324 (361)
T 3gka_A 276 -D--AIGQQLKAAF---GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPD 324 (361)
T ss_dssp -T--CCHHHHHHHH---CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred -H--HHHHHHHHHc---CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcH
Confidence 0 4677888888 7999999999 999999999998 999999999998753
No 108
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.07 E-value=0.0001 Score=65.95 Aligned_cols=141 Identities=14% Similarity=0.052 Sum_probs=92.0
Q ss_pred HHHHHHhCCceEEecCCCCCC--HHHHHHHHHHHHhhcCCcEEeeee---cCC----C--------------c-----HH
Q 022271 27 LVAAVANAGGLGLLRAPDWEA--PDYLRDLIRKTRSLTERPFGVGVV---LAF----P--------------H-----NE 78 (300)
Q Consensus 27 la~avs~aGglG~i~~~~~~~--~~~l~~~i~~~r~~~~~P~gvnl~---~~~----~--------------~-----~~ 78 (300)
++.+++.+|.=.++-.....+ .+.+.+.++++|+.++.|+-+++. .+. + + ..
T Consensus 58 ~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~i~~~aDa~l~psvlNs~n~~~i~g~ 137 (286)
T 3vk5_A 58 KAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFPVVRGADALLLPALLGSGDDYFVWKS 137 (286)
T ss_dssp HHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSCCCTTCSEEEEEEETTBSSHHHHTHH
T ss_pred HHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccccccCCCEEEEEEEecCCCcccccCc
Confidence 678888888633332122257 788999999999988999877455 211 0 1 12
Q ss_pred --HHHH---H----HHcCCcEEEE-----cCC-------------CCc----HHHHHHHHHCCCeEeecc-----Chhch
Q 022271 79 --NIKA---I----LSEKVAVLQV-----SWG-------------EYS----EELVLEAHSAGVKVVPQD-----GLISL 122 (300)
Q Consensus 79 --~~~~---~----~e~g~~~i~~-----~~G-------------~~~----~~~v~~~~~~G~~v~~~~-----~~~~l 122 (300)
+... + .+.+ .+|.. .-| .|. ..+.......|.+++..+ ....+
T Consensus 138 ~~~~~aa~~v~~~~~~~g-e~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa~~gad~G~~lV~LD~~~~~v~~e~ 216 (286)
T 3vk5_A 138 FLETLAAFPGRIPREEWP-ELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYLHVARAFGFHMVYLYSRNEHVPPEV 216 (286)
T ss_dssp HHHHHHHCSTTSCGGGCC-EEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHHHHHHHTTCSEEEEECSSSCCCHHH
T ss_pred HHHHHHhHHHHHHHHHhC-CcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHHHHHHHcCCCEEEEcCCCCcCCHHH
Confidence 2211 2 3444 55432 222 221 123333455677776542 24567
Q ss_pred HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 123 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 123 l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+.++++.+. .++||++.|||+|.+++.+++.+|||+|++||+++-.
T Consensus 217 V~~I~~~~~-~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~d 262 (286)
T 3vk5_A 217 VRHFRKGLG-PDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQP 262 (286)
T ss_dssp HHHHHHHSC-TTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSST
T ss_pred HHHHHHhcC-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhcC
Confidence 778877752 1599999999999999999999999999999999755
No 109
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.05 E-value=2.8e-05 Score=72.05 Aligned_cols=110 Identities=21% Similarity=0.195 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhhc--CCcEEeeeecCCC------c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeecc
Q 022271 49 DYLRDLIRKTRSLT--ERPFGVGVVLAFP------H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQD 117 (300)
Q Consensus 49 ~~l~~~i~~~r~~~--~~P~gvnl~~~~~------~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~ 117 (300)
.-+.+.++.+|+.. +.|++|.+-.... . .+.++.+.+. ++.|.++.|.... ....... .
T Consensus 194 rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~--------~~~~~~~-~ 263 (343)
T 3kru_A 194 RFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLN--------VDINLYP-G 263 (343)
T ss_dssp HHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSC--------CCCCCCT-T
T ss_pred HHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEe--------eeecccC-c
Confidence 34677888899876 5799999887421 1 3456666677 9999987554211 0000000 1
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
..+.++.++++.+ ++|||+.|||.|++++.+++..| ||+|++|+.|++.++
T Consensus 264 ~~~~~~~~ir~~~---~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPd 315 (343)
T 3kru_A 264 YQVKYAETIKKRC---NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPY 315 (343)
T ss_dssp TTHHHHHHHHHHH---TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTT
T ss_pred eeehHHHHHHHhc---CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCe
Confidence 1456778888888 79999999999999999999998 999999999998753
No 110
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.05 E-value=2.8e-05 Score=72.63 Aligned_cols=103 Identities=16% Similarity=0.222 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhhcCC-cEEeeeecCCC--------c----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTER-PFGVGVVLAFP--------H----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~~-P~gvnl~~~~~--------~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
.+.+.++.+|+..+. |++|.+..... . .+.++.+.+.|++.|.++.+.... ..+
T Consensus 213 ~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-------~~~------ 279 (365)
T 2gou_A 213 FLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD-------APD------ 279 (365)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB-------CCC------
T ss_pred HHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC-------CCC------
Confidence 456678888887532 99998876421 1 244777888999999998653210 001
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
. ...++.++++.+ ++|||+.||| +++++.++|..| ||+|++|+.|+..+
T Consensus 280 ~-~~~~~~~i~~~~---~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~~P 329 (365)
T 2gou_A 280 T-PVSFKRALREAY---QGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIANP 329 (365)
T ss_dssp C-CHHHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHHCT
T ss_pred c-cHHHHHHHHHHC---CCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHhCc
Confidence 1 235677888887 7999999999 999999999998 99999999999864
No 111
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.05 E-value=1.5e-05 Score=68.56 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=87.4
Q ss_pred HHHHHHHHhCCceEEecCC-CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC-----
Q 022271 25 PELVAAVANAGGLGLLRAP-DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY----- 98 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~-~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~----- 98 (300)
.+.+.++..+| +..+..- .-.+.+++.+.++++.+ .++++++.+. .++.+.+.+++.|.+.....
T Consensus 16 ~~~~~~a~~~G-v~~v~lr~k~~~~~~~~~~i~~l~~----~~~~~livnd----~~~~A~~~gadgvhl~~~~~~~~~~ 86 (210)
T 3ceu_A 16 DKIITALFEEG-LDILHLRKPETPAMYSERLLTLIPE----KYHRRIVTHE----HFYLKEEFNLMGIHLNARNPSEPHD 86 (210)
T ss_dssp HHHHHHHHHTT-CCEEEECCSSCCHHHHHHHHHHSCG----GGGGGEEESS----CTTHHHHTTCSEEECCSSSCSCCTT
T ss_pred HHHHHHHHHCC-CCEEEEccCCCCHHHHHHHHHHHHH----HhCCeEEEeC----CHHHHHHcCCCEEEECccccccccc
Confidence 35555555655 4444321 11356666666544432 3566666643 34677788888775532110
Q ss_pred -----------cHHHHHHHHHCCCeEeec------c--------ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH
Q 022271 99 -----------SEELVLEAHSAGVKVVPQ------D--------GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 153 (300)
Q Consensus 99 -----------~~~~v~~~~~~G~~v~~~------~--------~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal 153 (300)
+.+ +.... .|...+.. . ..+..+.++.+.+. .++||++.|||. .+.+.+++
T Consensus 87 ~~~~ig~s~~t~~e-~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~-~~iPviaiGGI~-~~nv~~~~ 162 (210)
T 3ceu_A 87 YAGHVSCSCHSVEE-VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKI-IDSKVMALGGIN-EDNLLEIK 162 (210)
T ss_dssp CCSEEEEEECSHHH-HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTC-SSTTEEEESSCC-TTTHHHHH
T ss_pred cCCEEEEecCCHHH-HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcC-CCCCEEEECCCC-HHHHHHHH
Confidence 223 33333 56554421 0 12356667666520 179999999998 89999999
Q ss_pred HCCCcEEEeccccccCcccCCCHHHHHHHH
Q 022271 154 SLGAQGICLGTRFVASEESYAHPEYKRKLV 183 (300)
Q Consensus 154 ~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~ 183 (300)
..||+||.++|.+...++......|++.+.
T Consensus 163 ~~Ga~gVav~s~i~~~~d~~~~~~~~~~v~ 192 (210)
T 3ceu_A 163 DFGFGGAVVLGDLWNKFDACLDQNYLAVIE 192 (210)
T ss_dssp HTTCSEEEESHHHHTTCCTTTSSCCHHHHH
T ss_pred HhCCCEEEEhHHhHcCCCHHHHHHHHHHHH
Confidence 999999999999987665544445555443
No 112
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.04 E-value=9.6e-06 Score=70.13 Aligned_cols=46 Identities=26% Similarity=0.413 Sum_probs=40.6
Q ss_pred hchHHHHHHhhCCCC-CcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 120 ISLLPMVVDLIGDRD-IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~-iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+.++.++++.+ + +||+++|||. .+++.+++.+||+||.+||.+...
T Consensus 160 ~~~l~~~~~~~---~~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~i~~~ 206 (227)
T 2tps_A 160 VSLIEAVRRQG---ISIPIVGIGGIT-IDNAAPVIQAGADGVSMISAISQA 206 (227)
T ss_dssp THHHHHHHHTT---CCCCEEEESSCC-TTTSHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHHHHHhC---CCCCEEEEcCCC-HHHHHHHHHcCCCEEEEhHHhhcC
Confidence 45677777765 5 9999999999 999999999999999999999876
No 113
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.03 E-value=2.4e-05 Score=67.62 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=78.9
Q ss_pred HHHHHHHhh-cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCCCeEee------c------
Q 022271 53 DLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVP------Q------ 116 (300)
Q Consensus 53 ~~i~~~r~~-~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G~~v~~------~------ 116 (300)
+.|+++|+. ++.|+.+.+-........++.+.+.|++++.++.-.+. .++++.+++.|+..+. +
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~~~~~ 127 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQDAKA 127 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHHHHHH
Confidence 457778877 56677655544444456788999999999999853221 3456667778877642 1
Q ss_pred ------------c-------C---hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 ------------D-------G---LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 ------------~-------~---~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
. + ....+..+++... .++|+++.||| +.+.+..++..|||+|.+||++...
T Consensus 128 ~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~-~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 128 WVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSA-LGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp HHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHH-TTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred HHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhC-CCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC
Confidence 0 0 0112344444431 26999999999 6899999999999999999987754
No 114
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.02 E-value=4.1e-05 Score=71.82 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC------------cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP------------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~------------~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
.+.+.++.+|+..+ .|++|.+-.... ..+.++.+.+.|++.|.++.|... . . ..+
T Consensus 218 ~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~-~----~-~~~------ 285 (377)
T 2r14_A 218 FPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWI-G----G-DIT------ 285 (377)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------------C------
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc-C----C-CCc------
Confidence 45667888888764 299999866421 134577778899999999865421 1 0 011
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
..+.++.++++.+ ++|||+.||| +++++.+++..| ||+|++|+.|+..+
T Consensus 286 -~~~~~~~~ik~~~---~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~P 335 (377)
T 2r14_A 286 -YPEGFREQMRQRF---KGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIANP 335 (377)
T ss_dssp -CCTTHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred -chHHHHHHHHHHC---CCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhCc
Confidence 1356788888887 7999999999 799999999998 99999999999864
No 115
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.00 E-value=2.3e-05 Score=69.58 Aligned_cols=140 Identities=13% Similarity=0.076 Sum_probs=91.9
Q ss_pred cHHHHHHHHhCCceEE--ecCCCCC--CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCC--
Q 022271 24 GPELVAAVANAGGLGL--LRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGE-- 97 (300)
Q Consensus 24 ~~~la~avs~aGglG~--i~~~~~~--~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~-- 97 (300)
..++|.+..++|.-++ +....+. +++ .++.+|+.++.|+-.+-+. .+..+++.+.+.|++.|.+....
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f~G~~~----~l~~i~~~v~lPvl~kdfI--~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRFGGSLL----DLKRVREAVDLPLLRKDFV--VDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSSCCCHH----HHHHHHHHCCSCEEEESCC--CSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred HHHHHHHHHHcCCCEEEEecchhhhccCHH----HHHHHHHhcCCCEEECCcC--CCHHHHHHHHHcCCCEEEECccchH
Confidence 4688888888775443 2111111 343 5667777788897665443 23556788999999999874221
Q ss_pred -CcHHHHHHHHHCCCeEeec----------------------------cChhchHHHHHHhhCC--CCCcEEEccCCCCh
Q 022271 98 -YSEELVLEAHSAGVKVVPQ----------------------------DGLISLLPMVVDLIGD--RDIPIIAAGGIVDA 146 (300)
Q Consensus 98 -~~~~~v~~~~~~G~~v~~~----------------------------~~~~~ll~~v~~~~~~--~~iPViaaGGI~~g 146 (300)
..++++...++.|..+... ...+..+.++++.+.. .++|+|+.|||.++
T Consensus 141 ~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~ 220 (254)
T 1vc4_A 141 ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVAESGYSRK 220 (254)
T ss_dssp GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSH
T ss_pred HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCH
Confidence 1244555555677776422 0123344445544410 15899999999999
Q ss_pred HHHHHHHHCCCcEEEeccccccCc
Q 022271 147 RGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+|+.++.. ||+||.+|++++...
T Consensus 221 ~dv~~l~~-Ga~gvlVGsAl~~~~ 243 (254)
T 1vc4_A 221 EELKALEG-LFDAVLIGTSLMRAP 243 (254)
T ss_dssp HHHHTTTT-TCSEEEECHHHHTSS
T ss_pred HHHHHHHc-CCCEEEEeHHHcCCC
Confidence 99999999 999999999999764
No 116
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.99 E-value=2.6e-06 Score=75.04 Aligned_cols=48 Identities=27% Similarity=0.455 Sum_probs=0.0
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+.++.++++.+ ++|||+.|||.+.+++.+++.+|||+|++|++++..+
T Consensus 189 ~~~~~~i~~~~---~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~~p 236 (247)
T 3tdn_A 189 TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENP 236 (247)
T ss_dssp ---------------------------------------------------
T ss_pred HHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHcCc
Confidence 45667777666 7999999999999999999999999999999998654
No 117
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.96 E-value=9.1e-06 Score=71.54 Aligned_cols=50 Identities=26% Similarity=0.412 Sum_probs=44.4
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.++.++++.+ ++||++.|||.|.+++..++..|||+|.+||.++..++
T Consensus 67 ~~~~i~~i~~~~---~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~dp~ 116 (247)
T 3tdn_A 67 DTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVENPS 116 (247)
T ss_dssp CHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHCTH
T ss_pred cHHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhChH
Confidence 456778888776 89999999999999999999999999999999997644
No 118
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.95 E-value=7e-05 Score=66.27 Aligned_cols=140 Identities=18% Similarity=0.227 Sum_probs=91.0
Q ss_pred cHHHHHHHHh-CCceEEecCCCCC--CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc-
Q 022271 24 GPELVAAVAN-AGGLGLLRAPDWE--APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS- 99 (300)
Q Consensus 24 ~~~la~avs~-aGglG~i~~~~~~--~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~- 99 (300)
..++|.+..+ |-++-++.-..|. +. +.|+++|+.++.|+--+=+.-+++ ++..+.+.|+++|.+.....+
T Consensus 63 ~~~iA~~y~~~A~~IsVlTd~~~F~gs~----~dL~~ir~~v~lPvLrKDfi~~~~--qi~ea~~~GAD~ilLi~a~l~~ 136 (251)
T 1i4n_A 63 LEDFIRMYDELADAISILTEKHYFKGDP----AFVRAARNLTCRPILAKDFYIDTV--QVKLASSVGADAILIIARILTA 136 (251)
T ss_dssp HHHHHHHHHHHCSEEEEECCCSSSCCCT----HHHHHHHTTCCSCEEEECCCCSTH--HHHHHHHTTCSEEEEEGGGSCH
T ss_pred HHHHHHHHHHhCCceEEEecccccCCCH----HHHHHHHHhCCCCEEEeeCCCCHH--HHHHHHHcCCCEEEEecccCCH
Confidence 3567766555 4445444221111 33 467788888888875544443333 466688999999987543322
Q ss_pred ---HHHHHHHHHCCCeEeec------------c-C----------------hhchHHHHHHhhCCCCCcEEEccCCCChH
Q 022271 100 ---EELVLEAHSAGVKVVPQ------------D-G----------------LISLLPMVVDLIGDRDIPIIAAGGIVDAR 147 (300)
Q Consensus 100 ---~~~v~~~~~~G~~v~~~------------~-~----------------~~~ll~~v~~~~~~~~iPViaaGGI~~g~ 147 (300)
.++++.+++.|..++.. . + .+....++.+.+. .++++|+.|||.+++
T Consensus 137 ~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip-~~~~vIaEsGI~t~e 215 (251)
T 1i4n_A 137 EQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVP-DDTVVVAESGIKDPR 215 (251)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSC-TTSEEEEESCCCCGG
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCC-CCCEEEEeCCCCCHH
Confidence 34555566667666543 1 1 1234444544442 268999999999999
Q ss_pred HHHHHHHCCCcEEEeccccccCcc
Q 022271 148 GYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 148 ~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
|+..+..+ |++|.+|+.++.++.
T Consensus 216 dv~~~~~~-a~avLVG~aimr~~d 238 (251)
T 1i4n_A 216 ELKDLRGK-VNAVLVGTSIMKAEN 238 (251)
T ss_dssp GHHHHTTT-CSEEEECHHHHHCSS
T ss_pred HHHHHHHh-CCEEEEcHHHcCCcC
Confidence 99999999 999999999998754
No 119
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.93 E-value=3.6e-05 Score=72.12 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC-------c-----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP-------H-----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~-------~-----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
.+.+.++.+|+..+ .|++|.+-.... . .+.++.+.+.|++.|.++.+.... . . .+
T Consensus 219 ~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~-~-~----~~------ 286 (376)
T 1icp_A 219 FALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT-A-W----EK------ 286 (376)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC----------------
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccC-C-C----Cc------
Confidence 46677888888764 299999975421 1 345677778999999998653210 0 0 00
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
.....++.++++.+ ++|||+.||| +.+++.++|..| ||+|++|+.|++.+
T Consensus 287 ~~~~~~~~~vr~~~---~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~P 337 (376)
T 1icp_A 287 IECTESLVPMRKAY---KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISNP 337 (376)
T ss_dssp --CCCCSHHHHHHC---CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred cccHHHHHHHHHHc---CCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhCc
Confidence 01235567788887 7999999999 999999999998 99999999999864
No 120
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.89 E-value=5.6e-05 Score=70.51 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCC--------C-c----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEee
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAF--------P-H----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP 115 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~--------~-~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~ 115 (300)
.+.+.++.+|+..+ .|++|.+.... . . .+.++.+.+.|++.|.++.+... .+ .
T Consensus 213 ~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~---------~~----~ 279 (364)
T 1vyr_A 213 LVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLA---------GG----K 279 (364)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT---------BC----C
T ss_pred hHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCccc---------CC----C
Confidence 46667888888763 39999887642 1 1 23467778899999999864320 00 0
Q ss_pred ccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 116 QDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 116 ~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
.....++.++++.+ ++|||+.||| +++++.++|..| ||+|++|+.|+..+
T Consensus 280 -~~~~~~~~~v~~~~---~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P 330 (364)
T 1vyr_A 280 -PYSEAFRQKVRERF---HGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYIANP 330 (364)
T ss_dssp -CCCHHHHHHHHHHC---CSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred -cccHHHHHHHHHHC---CCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHHhCh
Confidence 01245677888887 7999999999 999999999998 99999999999864
No 121
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.87 E-value=0.00015 Score=62.60 Aligned_cols=132 Identities=20% Similarity=0.253 Sum_probs=92.9
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHH
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v 103 (300)
.+++.++.+ ||+-.+-. .+.+++.+ +.|+++++.. +..+|.+-+. +.++++.+++.|+++|..- +. .++++
T Consensus 28 ~~~a~al~~-gGi~~iEv-t~~t~~a~-~~I~~l~~~~p~~~IGAGTVl---t~~~a~~ai~AGA~fivsP-~~-~~evi 99 (217)
T 3lab_A 28 IPMAKALVA-GGVHLLEV-TLRTEAGL-AAISAIKKAVPEAIVGAGTVC---TADDFQKAIDAGAQFIVSP-GL-TPELI 99 (217)
T ss_dssp HHHHHHHHH-TTCCEEEE-ETTSTTHH-HHHHHHHHHCTTSEEEEECCC---SHHHHHHHHHHTCSEEEES-SC-CHHHH
T ss_pred HHHHHHHHH-cCCCEEEE-eCCCccHH-HHHHHHHHHCCCCeEeecccc---CHHHHHHHHHcCCCEEEeC-CC-cHHHH
Confidence 467777666 45666543 24555544 5677777654 4447777554 5889999999999999775 43 56889
Q ss_pred HHHHHCCC------eEeec--------------------cC-----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHH
Q 022271 104 LEAHSAGV------KVVPQ--------------------DG-----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 152 (300)
Q Consensus 104 ~~~~~~G~------~v~~~--------------------~~-----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aa 152 (300)
+.+++.|+ .+++. .+ -..++..++.-+ .++|+++.|||. .+.+..+
T Consensus 100 ~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~--p~i~~~ptGGI~-~~N~~~~ 176 (217)
T 3lab_A 100 EKAKQVKLDGQWQGVFLPGVATASEVMIAAQAGITQLKCFPASAIGGAKLLKAWSGPF--PDIQFCPTGGIS-KDNYKEY 176 (217)
T ss_dssp HHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTC--TTCEEEEBSSCC-TTTHHHH
T ss_pred HHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcCCCEEEECccccccCHHHHHHHHhhh--cCceEEEeCCCC-HHHHHHH
Confidence 88888888 77764 11 134555555444 279999999998 8899999
Q ss_pred HHCCCcEEEeccccc
Q 022271 153 LSLGAQGICLGTRFV 167 (300)
Q Consensus 153 l~lGAdgV~~GT~fl 167 (300)
+++|+..+..||.+.
T Consensus 177 l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 177 LGLPNVICAGGSWLT 191 (217)
T ss_dssp HHSTTBCCEEESGGG
T ss_pred HHCCCEEEEEChhhc
Confidence 999998887665443
No 122
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.82 E-value=0.00012 Score=69.99 Aligned_cols=124 Identities=15% Similarity=0.196 Sum_probs=87.3
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc----HHHHHHHHHCCCeEeec------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS----EELVLEAHSAGVKVVPQ------------ 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~----~~~v~~~~~~G~~v~~~------------ 116 (300)
+.|+++|+.++.|+--+=+. .+..++..+.+.|+++|.+.....+ .++++.+++.|..++..
T Consensus 98 ~dL~~vr~~v~lPvLrKDFI--~d~~Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~ 175 (452)
T 1pii_A 98 NFLPIVSQIAPQPILCKDFI--IDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIA 175 (452)
T ss_dssp THHHHHHHHCCSCEEEESCC--CSHHHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEecc--CCHHHHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence 35777788788887443333 2344567788999999987654433 45666677888888754
Q ss_pred ----------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHH
Q 022271 117 ----------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKR 180 (300)
Q Consensus 117 ----------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~ 180 (300)
...+....++++.+.. ++++|+.|||.+++|+..+..+ |++|.+|+.++.++. .....++
T Consensus 176 lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~-~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~d--~~~~~~~ 251 (452)
T 1pii_A 176 LGAKVVGINNRDLRDLSIDLNRTRELAPKLGH-NVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHDD--LHAAVRR 251 (452)
T ss_dssp TTCSEEEEESEETTTTEECTHHHHHHHHHHCT-TSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCSC--HHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCC-CCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCcC--HHHHHHH
Confidence 0123445555555532 6899999999999999999999 999999999998754 3444555
Q ss_pred HH
Q 022271 181 KL 182 (300)
Q Consensus 181 ~i 182 (300)
.+
T Consensus 252 l~ 253 (452)
T 1pii_A 252 VL 253 (452)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 123
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.81 E-value=0.00012 Score=69.30 Aligned_cols=113 Identities=16% Similarity=0.201 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHhhcC-CcEEeeeecCCC------------cHHHHHHHHHcC------CcEEEEcCCCCcHHHHHHHHHC
Q 022271 49 DYLRDLIRKTRSLTE-RPFGVGVVLAFP------------HNENIKAILSEK------VAVLQVSWGEYSEELVLEAHSA 109 (300)
Q Consensus 49 ~~l~~~i~~~r~~~~-~P~gvnl~~~~~------------~~~~~~~~~e~g------~~~i~~~~G~~~~~~v~~~~~~ 109 (300)
..+.+.++.+|+..+ .|++|.+-.... ..+.++.+.+.| ++.|.++.|....... ..
T Consensus 222 rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~----~~ 297 (402)
T 2hsa_B 222 KFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQ----TE 297 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTT----SS
T ss_pred HHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccC----Cc
Confidence 346677888888763 499999876421 134567777889 9999998653210000 00
Q ss_pred CCeEeec-cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 110 GVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 110 G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
...+.. .....++.++++.+ ++|||+.||| +++++.++|..| ||+|++|+.|++-+
T Consensus 298 -~~~~~~~~~~~~~~~~vk~~~---~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP 355 (402)
T 2hsa_B 298 -AGRLGSEEEEARLMRTLRNAY---QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNP 355 (402)
T ss_dssp -STTTTHHHHHHHHHHHHHHHC---SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred -cccccCCcchHHHHHHHHHHC---CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCc
Confidence 000000 01245667788887 7999999999 999999999998 99999999999874
No 124
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.80 E-value=0.00027 Score=60.06 Aligned_cols=116 Identities=13% Similarity=0.038 Sum_probs=77.3
Q ss_pred HHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEeecc-----------
Q 022271 53 DLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVVPQD----------- 117 (300)
Q Consensus 53 ~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~~~~----------- 117 (300)
+.++++|+.+ +.|+-+.+...+..+..++.+.+.|++.|.++.+.. ..++++.+++.|..+....
T Consensus 42 ~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~ 121 (207)
T 3ajx_A 42 SVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQ 121 (207)
T ss_dssp HHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEEEecCCChHHHHH
Confidence 3577777776 778888777654335568899999999998875432 1234455566566552210
Q ss_pred --------------------ChhchH-HHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 118 --------------------GLISLL-PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 118 --------------------~~~~ll-~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
...... ..+++.... ++|+++.|||. .+.+..++..|||+|.+||.+...+
T Consensus 122 ~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~~~ 193 (207)
T 3ajx_A 122 EVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA-RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYGAA 193 (207)
T ss_dssp HHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH-TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHhCCCEEEEEecccccccCCCchHHHHHHhhCC-CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccCCC
Confidence 000001 334433311 58999999998 7889999999999999999988754
No 125
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.75 E-value=0.0003 Score=61.98 Aligned_cols=116 Identities=15% Similarity=0.142 Sum_probs=77.7
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc----HHHHHHHHHCCCeEeec------------
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS----EELVLEAHSAGVKVVPQ------------ 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~----~~~v~~~~~~G~~v~~~------------ 116 (300)
+.++++|+.++.|+--+=|. -++.++......|+++|.+-....+ .++.+..++.|..++.-
T Consensus 94 ~~L~~vr~~v~lPvLrKDFi--id~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~ 171 (258)
T 4a29_A 94 ETLRKIASSVSIPILMSDFI--VKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALR 171 (258)
T ss_dssp HHHHHHHTTCSSCEEEESCC--CSHHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEeecccc--ccHHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhc
Confidence 35677888888887433222 2456777777889998876433322 24445555666555432
Q ss_pred ------------cCh----hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 ------------DGL----ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 ------------~~~----~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
..+ +....++.+.+. .++.+|+.+||.+++|+..+...|+|+|.+|+.|+.+++
T Consensus 172 ~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip-~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~~d 241 (258)
T 4a29_A 172 IGARFIGIMSRDFETGEINKENQRKLISMIP-SNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPE 241 (258)
T ss_dssp TTCSEEEECSBCTTTCCBCHHHHHHHHTTSC-TTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHCTT
T ss_pred CCCcEEEEeCCCccccccCHHHHHHHHhhCC-CCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCCCc
Confidence 011 223334444442 268899999999999999999999999999999998754
No 126
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.75 E-value=0.00014 Score=68.16 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC------------cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP------------HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~------------~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
.+.+.++.+|+..+ .|++|.+-.... ..+.++.+.+.|++.|.++.+.... .+
T Consensus 229 ~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--------~~------ 294 (379)
T 3aty_A 229 LIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--------QQ------ 294 (379)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--------CC------
T ss_pred HHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--------CC------
Confidence 45666788887654 489998776421 1345677778899999998654210 11
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
... . +.++++.+ ++|||+.||| +++++.++|..| ||+|++|+.|++.+
T Consensus 295 ~~~-~-~~~ir~~~---~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~~P 343 (379)
T 3aty_A 295 IGD-V-VAWVRGSY---SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIANP 343 (379)
T ss_dssp CCC-H-HHHHHTTC---CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCT
T ss_pred ccH-H-HHHHHHHC---CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHhCc
Confidence 111 4 66777776 7999999999 999999999998 99999999999864
No 127
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.71 E-value=5.9e-05 Score=74.20 Aligned_cols=80 Identities=24% Similarity=0.216 Sum_probs=61.0
Q ss_pred HHHHHHHHHCCCeEee--c---c-----ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH-CCCcEEEecccccc
Q 022271 100 EELVLEAHSAGVKVVP--Q---D-----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRFVA 168 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~--~---~-----~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~-lGAdgV~~GT~fl~ 168 (300)
.++.+++.+.|+..+. . . ..+.++.++++.+ ++|||++|||.+.+|+.+++. .||++|++|++|..
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~---~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAV---KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHC---SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhC---CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 4677778887765442 2 1 2567999999987 899999999999999999998 89999999999976
Q ss_pred CcccCCCHHHHHHHHc
Q 022271 169 SEESYAHPEYKRKLVE 184 (300)
Q Consensus 169 t~Es~~~~~~k~~i~~ 184 (300)
.+- .-...|+.+.+
T Consensus 532 ~~~--~~~e~~~~l~~ 545 (555)
T 1jvn_A 532 GEF--TVNDVKEYLLE 545 (555)
T ss_dssp TSC--CHHHHHHHHHH
T ss_pred CCC--CHHHHHHHHHH
Confidence 532 23445554443
No 128
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.68 E-value=0.00015 Score=63.23 Aligned_cols=111 Identities=15% Similarity=0.236 Sum_probs=78.9
Q ss_pred HHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHH---HHHHCCCeEeec---------
Q 022271 53 DLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVL---EAHSAGVKVVPQ--------- 116 (300)
Q Consensus 53 ~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~---~~~~~G~~v~~~--------- 116 (300)
..++.+|+.+ ++|+-+-|+..+|. .+++.+.+ ++.++++.... +...++ .+++.|.++...
T Consensus 53 ~~v~~lr~~~p~~~~dvhLmv~dp~-~~i~~~~~--Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp~~~ 129 (227)
T 1tqx_A 53 PVINNLKKYTKSIFFDVHLMVEYPE-KYVPLLKT--SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQK 129 (227)
T ss_dssp HHHHHHGGGCSSCEEEEEEESSCGG-GGGGGCTT--SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGG
T ss_pred HHHHHHHHhCCCCcEEEEEEEcCHH-HHHHHHHh--CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHH
Confidence 5788899998 89999999998754 23333334 77777765332 345666 677777665432
Q ss_pred ----------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 117 ----------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 117 ----------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
...+.-+.++++..+ +++|.+.|||. .+.+..+..+|||.+++||.+..
T Consensus 130 ~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~--~~~I~VdGGI~-~~ti~~~~~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 130 LVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK--NLNIQVDGGLN-IETTEISASHGANIIVAGTSIFN 206 (227)
T ss_dssp GHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT--TCEEEEESSCC-HHHHHHHHHHTCCEEEESHHHHT
T ss_pred HHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc--CCeEEEECCCC-HHHHHHHHHcCCCEEEEeHHHhC
Confidence 012334555665543 68999999997 67899999999999999999876
Q ss_pred C
Q 022271 169 S 169 (300)
Q Consensus 169 t 169 (300)
.
T Consensus 207 ~ 207 (227)
T 1tqx_A 207 A 207 (227)
T ss_dssp C
T ss_pred C
Confidence 4
No 129
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.65 E-value=0.00019 Score=62.94 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=83.8
Q ss_pred HHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC--cHHHHHHHHHC---------CCeEeec-----
Q 022271 53 DLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY--SEELVLEAHSA---------GVKVVPQ----- 116 (300)
Q Consensus 53 ~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~--~~~~v~~~~~~---------G~~v~~~----- 116 (300)
..++++|+.+++ -+.|+...| +.+++.+.+.|++.|+++.+.. +...++.+++. |.++...
T Consensus 61 ~~v~~lr~~~~~--DvhLMv~~p-~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~T 137 (237)
T 3cu2_A 61 IGIKYFPTHCFK--DVHLMVRNQ-LEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPET 137 (237)
T ss_dssp HHHHTSCTTSEE--EEEEECSCH-HHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTS
T ss_pred HHHHHHhhhCCC--CeEEEEECH-HHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCC
Confidence 467777777654 788876644 6789999999999999987542 45778888888 8776543
Q ss_pred -----------------------cC-------hhchHHHHHHhhCC--CCCcEEEccCCCChHHHHHHHH--CCCcEEEe
Q 022271 117 -----------------------DG-------LISLLPMVVDLIGD--RDIPIIAAGGIVDARGYVAALS--LGAQGICL 162 (300)
Q Consensus 117 -----------------------~~-------~~~ll~~v~~~~~~--~~iPViaaGGI~~g~~v~aal~--lGAdgV~~ 162 (300)
.+ .+.-+.++++..++ .++||.+.|||. .+.+..+.. .|||++++
T Consensus 138 p~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~Vv 216 (237)
T 3cu2_A 138 PISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVS 216 (237)
T ss_dssp CGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEE
T ss_pred hHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEE
Confidence 00 23344555555421 258999999996 788999999 99999999
Q ss_pred ccccccC
Q 022271 163 GTRFVAS 169 (300)
Q Consensus 163 GT~fl~t 169 (300)
||++...
T Consensus 217 GSaIf~~ 223 (237)
T 3cu2_A 217 GSALFSG 223 (237)
T ss_dssp CGGGGSS
T ss_pred eeHHhCC
Confidence 9998864
No 130
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.61 E-value=0.00028 Score=66.99 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhhc------CCcEEeeeecCC--------Cc---HHHHHHHHH-cCCcEEEEcCCCCcHHHHHHHHHCCC
Q 022271 50 YLRDLIRKTRSLT------ERPFGVGVVLAF--------PH---NENIKAILS-EKVAVLQVSWGEYSEELVLEAHSAGV 111 (300)
Q Consensus 50 ~l~~~i~~~r~~~------~~P~gvnl~~~~--------~~---~~~~~~~~e-~g~~~i~~~~G~~~~~~v~~~~~~G~ 111 (300)
-+.+.++++|+.. +.|++|.+.... .. .+.++.+.+ .|++.|.++.|....... ..
T Consensus 223 f~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~-----~~- 296 (419)
T 3l5a_A 223 LCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQN-----TS- 296 (419)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGC-----BC-
T ss_pred HHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCcccccc-----cc-
Confidence 4556677777764 568888876531 11 345777788 899999998654210000 00
Q ss_pred eEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcCCC
Q 022271 112 KVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDK 187 (300)
Q Consensus 112 ~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~ 187 (300)
..........++..+++.++. ++|||+.|||.|++++.+++.. ||+|.+|+.|++.++ +-+++.+...
T Consensus 297 ~~~g~~~~~~~a~~Ik~~v~~-~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPd------lv~ki~~G~~ 364 (419)
T 3l5a_A 297 RTPGDHFGRPVNQIVYEHLAG-RIPLIASGGINSPESALDALQH-ADMVGMSSPFVTEPD------FVHKLAEQRP 364 (419)
T ss_dssp CCSSTTTTSBHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTT------HHHHHHTTCG
T ss_pred CCCCccccHHHHHHHHHHcCC-CCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcH------HHHHHHcCCc
Confidence 000001134577788887732 5999999999999999999999 999999999998643 4455555433
No 131
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.56 E-value=0.00011 Score=74.48 Aligned_cols=113 Identities=13% Similarity=0.194 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhc--CCcEEeeeecCCC--------c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEe-e
Q 022271 50 YLRDLIRKTRSLT--ERPFGVGVVLAFP--------H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVV-P 115 (300)
Q Consensus 50 ~l~~~i~~~r~~~--~~P~gvnl~~~~~--------~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~-~ 115 (300)
-+.+.++.+|+.. +.|+++.+..... . .+.++.+ +.+++.+.++.|.... + ......-. .
T Consensus 201 ~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l-~~~~d~~~v~~g~~~~-~----~~~~~~~~~~ 274 (729)
T 1o94_A 201 FWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMA-DSLVDMWDITIGDIAE-W----GEDAGPSRFY 274 (729)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHH-GGGCSEEEEEECCSTT-G----GGTSCCTTTC
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHH-HhhcCEEEEeeecccc-c----ccccCCcccc
Confidence 4677788888876 7899999875311 1 2334444 4479999888764210 0 00000000 0
Q ss_pred ccC-hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 116 QDG-LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 116 ~~~-~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
..+ ...+..++++.+ ++|||+.|||.|++++.++|..| ||+|++|+.|++.++
T Consensus 275 ~~~~~~~~~~~i~~~~---~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~ 329 (729)
T 1o94_A 275 QQGHTIPWVKLVKQVS---KKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPF 329 (729)
T ss_dssp CTTTTHHHHHHHHTTC---SSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTT
T ss_pred CccccHHHHHHHHHHC---CCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCch
Confidence 011 345667777776 89999999999999999999998 999999999998753
No 132
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.56 E-value=0.00027 Score=70.82 Aligned_cols=113 Identities=17% Similarity=0.213 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhc--CCcEEeeeecCCC------c---HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeecc
Q 022271 49 DYLRDLIRKTRSLT--ERPFGVGVVLAFP------H---NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQD 117 (300)
Q Consensus 49 ~~l~~~i~~~r~~~--~~P~gvnl~~~~~------~---~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~ 117 (300)
..+.+.++.+|+.. +.|+++.+-.... . .+.++.+.+.|++.|.++.|.. .......... .. .
T Consensus 192 r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~-~~~~~~~~~~----~~-~ 265 (671)
T 1ps9_A 192 RFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWH-EARIPTIATP----VP-R 265 (671)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBT-TCSSCSSSTT----SC-T
T ss_pred HHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcc-cccccccccc----CC-c
Confidence 34677788888876 7889888875421 1 3456777789999998875431 0000000000 00 1
Q ss_pred C-hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCc
Q 022271 118 G-LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASE 170 (300)
Q Consensus 118 ~-~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~ 170 (300)
+ .+.++.++++.+ ++||++.|||.|++++.+++..| ||+|++|+.|+..+
T Consensus 266 ~~~~~~~~~i~~~~---~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 266 GAFSWVTRKLKGHV---SLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADA 317 (671)
T ss_dssp TTTHHHHHHHTTSC---SSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCT
T ss_pred chHHHHHHHHHHhc---CceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCc
Confidence 1 235566666665 79999999999999999999998 99999999999864
No 133
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.54 E-value=5.7e-05 Score=66.33 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+.|++.|.++- +... +. .....+.++.++++.+ ++||++.|||.+.+++..++..|
T Consensus 34 ~~~a~~~~~~Gad~i~v~d--~~~~--------~~---~~~~~~~~i~~i~~~~---~iPvi~~Ggi~~~~~~~~~~~~G 97 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLD--ISAT--------HE---ERAILLDVVARVAERV---FIPLTVGGGVRSLEDARKLLLSG 97 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEE--CCSS--------TT---CHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEc--CCcc--------cc---CccccHHHHHHHHHhC---CCCEEEECCcCCHHHHHHHHHcC
Confidence 4556666777777766541 1000 00 0011345667777665 89999999999999999999999
Q ss_pred CcEEEeccccccCc
Q 022271 157 AQGICLGTRFVASE 170 (300)
Q Consensus 157 AdgV~~GT~fl~t~ 170 (300)
||+|.+|+.++..+
T Consensus 98 ad~V~lg~~~l~~p 111 (252)
T 1ka9_F 98 ADKVSVNSAAVRRP 111 (252)
T ss_dssp CSEEEECHHHHHCT
T ss_pred CCEEEEChHHHhCc
Confidence 99999999999654
No 134
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.54 E-value=0.004 Score=53.17 Aligned_cols=139 Identities=22% Similarity=0.233 Sum_probs=94.4
Q ss_pred CCCcHHHHHHHHhCC--ceEEecCC---CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 21 DISGPELVAAVANAG--GLGLLRAP---DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~~---~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
|+++++=+.++.++| .+|++... -+.++++.++..+.+ ...+.-|.++.+.+.++..+.+.+.+.++|-++
T Consensus 7 Git~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~---~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH- 82 (203)
T 1v5x_A 7 GITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEAL---GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH- 82 (203)
T ss_dssp CCCCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHS---CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC-
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhC---CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC-
Confidence 577777677777666 59998421 235677666554433 233556777888777778888888999999999
Q ss_pred CCCcHHHHHHHHHCCCeEeec----------------------c---C-----hhchHHHHHHhhCCCCCcEEEccCCCC
Q 022271 96 GEYSEELVLEAHSAGVKVVPQ----------------------D---G-----LISLLPMVVDLIGDRDIPIIAAGGIVD 145 (300)
Q Consensus 96 G~~~~~~v~~~~~~G~~v~~~----------------------~---~-----~~~ll~~v~~~~~~~~iPViaaGGI~~ 145 (300)
|..+.+.++.++. +..++.. . | .+.+++.+.. . +.|++.|||| +
T Consensus 83 G~e~~~~~~~l~~-~~~vika~~v~~~~~l~~~~~~~d~~LlD~~~gGtG~~fdW~~l~~~~~-~---~~p~~LAGGL-~ 156 (203)
T 1v5x_A 83 GEEPPEWAEAVGR-FYPVIKAFPLEGPARPEWADYPAQALLLDGKRPGSGEAYPRAWAKPLLA-T---GRRVILAGGI-A 156 (203)
T ss_dssp SCCCHHHHHHHTT-TSCEEEEEECSSSCCGGGGGSSCSEEEEECSSTTSCCCCCGGGGHHHHH-T---TSCEEECSSC-C
T ss_pred CCCCHHHHHHhcc-CCCEEEEEEcCChHhhhhhhcCCCEEEEcCCCCCCCCccCHHHHHhhhc-c---CCcEEEECCC-C
Confidence 5456677877732 4444421 0 0 2345555222 1 5799999999 7
Q ss_pred hHHHHHHHHCCCcEEEeccccccC
Q 022271 146 ARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 146 g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
++.+..++..++.||=+.|.+=.+
T Consensus 157 peNV~~ai~~~p~gVDvsSGvE~~ 180 (203)
T 1v5x_A 157 PENLEEVLALRPYALDLASGVEEA 180 (203)
T ss_dssp STTHHHHHHHCCSEEEESGGGEEE
T ss_pred HHHHHHHHhcCCCEEEeCCceecC
Confidence 778888887799999999887643
No 135
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.52 E-value=0.00038 Score=60.21 Aligned_cols=116 Identities=17% Similarity=0.215 Sum_probs=72.9
Q ss_pred HHHHHhhcCCcEEe-eeecCCC----cHHHHHHHHHcCCcEEEEcCC---CCc---HHHHHHHHHCCCeEeec-------
Q 022271 55 IRKTRSLTERPFGV-GVVLAFP----HNENIKAILSEKVAVLQVSWG---EYS---EELVLEAHSAGVKVVPQ------- 116 (300)
Q Consensus 55 i~~~r~~~~~P~gv-nl~~~~~----~~~~~~~~~e~g~~~i~~~~G---~~~---~~~v~~~~~~G~~v~~~------- 116 (300)
++.+|+.++.|++. |+....+ -+-.++.+.+.|++.|.+..- .|. .+.++.+++.|..++..
T Consensus 45 l~~v~~~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~ 124 (219)
T 2h6r_A 45 LRMIVENVNIPVYAQHIDNINPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNINTS 124 (219)
T ss_dssp HHHHHHHCCSCBEESCCCSCCSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSHHH
T ss_pred HHHHHHHcCCcEEEEECChhhcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCchHH
Confidence 45555555778876 5322111 012367888899999988432 222 34455556778766543
Q ss_pred -------------cChh---------ch----HHHHHHhhCC--CCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 117 -------------DGLI---------SL----LPMVVDLIGD--RDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 117 -------------~~~~---------~l----l~~v~~~~~~--~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
.+.. .. +.++.+.++. .++||++.|||.+++++..+...|+|||.+|++++-
T Consensus 125 ~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 125 KAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVK 204 (219)
T ss_dssp HHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHT
T ss_pred HHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhC
Confidence 0000 11 1222222111 269999999999999999999999999999999998
Q ss_pred Cc
Q 022271 169 SE 170 (300)
Q Consensus 169 t~ 170 (300)
.+
T Consensus 205 ~~ 206 (219)
T 2h6r_A 205 AK 206 (219)
T ss_dssp CS
T ss_pred cc
Confidence 64
No 136
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.52 E-value=0.00011 Score=64.16 Aligned_cols=77 Identities=13% Similarity=0.171 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+.|++.+.++ + + .. - .... ...+.++.+++ .+ ++||++.|||.+.+++..++..|
T Consensus 33 ~~~a~~~~~~Gad~i~v~-d-~-~~-~--~~~~-------~~~~~~i~~i~-~~---~ipvi~~Ggi~~~~~~~~~~~~G 95 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVV-D-L-SN-A--IENS-------GENLPVLEKLS-EF---AEHIQIGGGIRSLDYAEKLRKLG 95 (241)
T ss_dssp HHHHHHHHHTTCCCEEEE-E-H-HH-H--HHCC-------CTTHHHHHHGG-GG---GGGEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEe-c-c-cc-c--ccCC-------chhHHHHHHHH-hc---CCcEEEECCCCCHHHHHHHHHCC
Confidence 456777777888877765 1 1 10 0 0111 12456667766 55 79999999999999999999999
Q ss_pred CcEEEeccccccCc
Q 022271 157 AQGICLGTRFVASE 170 (300)
Q Consensus 157 AdgV~~GT~fl~t~ 170 (300)
||+|.+|+.++..+
T Consensus 96 ad~V~lg~~~l~~p 109 (241)
T 1qo2_A 96 YRRQIVSSKVLEDP 109 (241)
T ss_dssp CCEEEECHHHHHCT
T ss_pred CCEEEECchHhhCh
Confidence 99999999999764
No 137
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.50 E-value=0.0012 Score=57.24 Aligned_cols=134 Identities=18% Similarity=0.273 Sum_probs=87.6
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHH
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v 103 (300)
.+++.++.++| +.++--. +.+++. .+.|+++++.. +..++.+.+. ..+.++.+++.|+++|... + ...+++
T Consensus 32 ~~~~~al~~gG-v~~iel~-~k~~~~-~~~i~~l~~~~~~l~vgaGtvl---~~d~~~~A~~aGAd~v~~p-~-~d~~v~ 103 (224)
T 1vhc_A 32 LPLADTLAKNG-LSVAEIT-FRSEAA-ADAIRLLRANRPDFLIAAGTVL---TAEQVVLAKSSGADFVVTP-G-LNPKIV 103 (224)
T ss_dssp HHHHHHHHHTT-CCEEEEE-TTSTTH-HHHHHHHHHHCTTCEEEEESCC---SHHHHHHHHHHTCSEEECS-S-CCHHHH
T ss_pred HHHHHHHHHcC-CCEEEEe-ccCchH-HHHHHHHHHhCcCcEEeeCcEe---eHHHHHHHHHCCCCEEEEC-C-CCHHHH
Confidence 46677766644 6665331 334433 34666565543 4556666533 4688999999999999654 3 245667
Q ss_pred HHHHHCCCeEeec--------------------cC-----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC-CC
Q 022271 104 LEAHSAGVKVVPQ--------------------DG-----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL-GA 157 (300)
Q Consensus 104 ~~~~~~G~~v~~~--------------------~~-----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l-GA 157 (300)
+.+++.|..++.. .+ -...+.+++..+. ++|+++.||| +.+.+..++.+ |+
T Consensus 104 ~~ar~~g~~~i~Gv~t~~e~~~A~~~Gad~vk~Fpa~~~gG~~~lk~l~~~~~--~ipvvaiGGI-~~~N~~~~l~agga 180 (224)
T 1vhc_A 104 KLCQDLNFPITPGVNNPMAIEIALEMGISAVKFFPAEASGGVKMIKALLGPYA--QLQIMPTGGI-GLHNIRDYLAIPNI 180 (224)
T ss_dssp HHHHHTTCCEECEECSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTTT--TCEEEEBSSC-CTTTHHHHHTSTTB
T ss_pred HHHHHhCCCEEeccCCHHHHHHHHHCCCCEEEEeeCccccCHHHHHHHHhhCC--CCeEEEECCc-CHHHHHHHHhcCCC
Confidence 7777777665432 11 1344555555442 6999999999 56899999999 99
Q ss_pred cEEEeccccccCc
Q 022271 158 QGICLGTRFVASE 170 (300)
Q Consensus 158 dgV~~GT~fl~t~ 170 (300)
++|. ||.+....
T Consensus 181 ~~v~-gS~i~~~~ 192 (224)
T 1vhc_A 181 VACG-GSWFVEKK 192 (224)
T ss_dssp CCEE-ECGGGCHH
T ss_pred EEEE-EchhcCcc
Confidence 9999 98887653
No 138
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.42 E-value=0.0011 Score=59.03 Aligned_cols=148 Identities=15% Similarity=0.165 Sum_probs=93.3
Q ss_pred ccceecCCCC---CCCCcHHHHHHHHhCCceEEecCC---------------CCCCHHHHHHHHHHHHhh--cCCcEEee
Q 022271 10 EYGIVQAPLG---PDISGPELVAAVANAGGLGLLRAP---------------DWEAPDYLRDLIRKTRSL--TERPFGVG 69 (300)
Q Consensus 10 ~~Pii~apM~---~g~s~~~la~avs~aGglG~i~~~---------------~~~~~~~l~~~i~~~r~~--~~~P~gvn 69 (300)
+.|++.+ +. ++.....+..++.++|.-|++.-+ ..+..+...+.|++.|++ ..-|+.
T Consensus 94 ~iPV~Ag-v~~~DP~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v-- 170 (286)
T 2p10_A 94 HTPVLAG-VNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYV-- 170 (286)
T ss_dssp SSCEEEE-ECTTCTTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEE--
T ss_pred CCCEEEE-ECCcCCCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEec--
Confidence 5788865 53 122345777999999999996322 113556677777777775 123332
Q ss_pred eecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCC--CCCcEEEcc-CCCCh
Q 022271 70 VVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGD--RDIPIIAAG-GIVDA 146 (300)
Q Consensus 70 l~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~--~~iPViaaG-GI~~g 146 (300)
.+.+..+.+.+.|+|+|..+.|......+-. |..+-. ......+.++.++++. .++.|+..| ||.++
T Consensus 171 -----~~~eeA~amA~agpDiI~~h~glT~gglIG~----~~avs~-~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstp 240 (286)
T 2p10_A 171 -----FSPEDAVAMAKAGADILVCHMGLTTGGAIGA----RSGKSM-DDCVSLINECIEAARTIRDDIIILSHGGPIANP 240 (286)
T ss_dssp -----CSHHHHHHHHHHTCSEEEEECSCC-------------CCCH-HHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSH
T ss_pred -----CCHHHHHHHHHcCCCEEEECCCCCCCCcccC----CCcccH-HHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCH
Confidence 2467888899999999999876432222321 111000 0012355555554421 366666665 99999
Q ss_pred HHHHHHHHC--CCcEEEeccccccCc
Q 022271 147 RGYVAALSL--GAQGICLGTRFVASE 170 (300)
Q Consensus 147 ~~v~aal~l--GAdgV~~GT~fl~t~ 170 (300)
+|+..++.+ |++|+..+|.+...+
T Consensus 241 eDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 241 EDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred HHHHHHHhcCCCccEEEeehhhhcCC
Confidence 999999999 999999999987763
No 139
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.42 E-value=0.00016 Score=72.82 Aligned_cols=148 Identities=13% Similarity=0.189 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhhc--CCcEEeeeecCCCc------H---HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccC
Q 022271 50 YLRDLIRKTRSLT--ERPFGVGVVLAFPH------N---ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDG 118 (300)
Q Consensus 50 ~l~~~i~~~r~~~--~~P~gvnl~~~~~~------~---~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~ 118 (300)
-+.+.++.+|+.. +.|+++.+...... + +.++.+.+ +++.+.++.|.... .. .... ....+
T Consensus 209 ~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~----~~-~~~~--~~~~~ 280 (690)
T 3k30_A 209 LLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEG----DS-VTSR--FAPEG 280 (690)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHH----HT-CCTT--TCCTT
T ss_pred HHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccc----cC-CCCc--cCCcc
Confidence 5667788888876 56889888665321 2 23444444 79999998774111 00 0000 00011
Q ss_pred -hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecc
Q 022271 119 -LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGR 196 (300)
Q Consensus 119 -~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~ 196 (300)
...+..++++++ ++|||+.|||.+++++.+++..| ||+|.+|+.|++.++ +-+++.+.+..++..-.+.
T Consensus 281 ~~~~~~~~i~~~~---~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~------~~~~~~~g~~~~i~~c~~c 351 (690)
T 3k30_A 281 RQEEFVAGLKKLT---TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPF------LPNKIRDGRLNLIRECIGC 351 (690)
T ss_dssp TTHHHHTTSGGGC---SSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTT------HHHHHHTTCGGGCCCCCCC
T ss_pred ccHHHHHHHHHHc---CCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCcc------HHHHHHcCCccccccccch
Confidence 234555666666 79999999999999999999998 999999999998743 4444444332221111110
Q ss_pred c-----CCCCCCCceecChhhHh
Q 022271 197 A-----RWPGAPHRVLQTPFFSN 214 (300)
Q Consensus 197 ~-----~~~g~~~R~l~n~~~~~ 214 (300)
. ...+.+.++..|+.+.+
T Consensus 352 ~~C~~~~~~~~~~~C~vnp~~g~ 374 (690)
T 3k30_A 352 NICVSGDLTMSPIRCTQNPSMGE 374 (690)
T ss_dssp CHHHHHHHTTSCCCCSSCTTTTT
T ss_pred hhhhhcccCCCcccCCcCcccCc
Confidence 0 01245678888887654
No 140
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.42 E-value=0.0017 Score=56.00 Aligned_cols=134 Identities=19% Similarity=0.275 Sum_probs=86.9
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHH
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v 103 (300)
.+++.++.++| +.++--. ..++.. .+.|+++++.. +..++.+.+ -..+.++.+++.|+++|... +. ..+++
T Consensus 31 ~~~~~al~~gG-v~~iel~-~k~~~~-~~~i~~l~~~~~~~~vgagtv---i~~d~~~~A~~aGAd~v~~p-~~-d~~v~ 102 (214)
T 1wbh_A 31 VPMAKALVAGG-VRVLNVT-LRTECA-VDAIRAIAKEVPEAIVGAGTV---LNPQQLAEVTEAGAQFAISP-GL-TEPLL 102 (214)
T ss_dssp HHHHHHHHHTT-CCEEEEE-SCSTTH-HHHHHHHHHHCTTSEEEEESC---CSHHHHHHHHHHTCSCEEES-SC-CHHHH
T ss_pred HHHHHHHHHcC-CCEEEEe-CCChhH-HHHHHHHHHHCcCCEEeeCEE---EEHHHHHHHHHcCCCEEEcC-CC-CHHHH
Confidence 36777766654 6665331 334433 34566565443 444566543 24688999999999988765 33 45667
Q ss_pred HHHHHCCCeEeec--------------------cC-----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC-CC
Q 022271 104 LEAHSAGVKVVPQ--------------------DG-----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL-GA 157 (300)
Q Consensus 104 ~~~~~~G~~v~~~--------------------~~-----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l-GA 157 (300)
+..++.|..++.. .+ -...+.+++..+. ++|+++.||| +.+.+..++.+ |+
T Consensus 103 ~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~v~~Fpa~~~gG~~~lk~i~~~~~--~ipvvaiGGI-~~~n~~~~l~agg~ 179 (214)
T 1wbh_A 103 KAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFS--QVRFCPTGGI-SPANYRDYLALKSV 179 (214)
T ss_dssp HHHHHSSSCEEEEESSHHHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCT--TCEEEEBSSC-CTTTHHHHHTSTTB
T ss_pred HHHHHhCCCEEEecCCHHHHHHHHHCCCCEEEEecCccccCHHHHHHHhhhCC--CCeEEEECCC-CHHHHHHHHhcCCC
Confidence 7777777665531 11 1344455554442 7999999999 56899999999 99
Q ss_pred cEEEeccccccCc
Q 022271 158 QGICLGTRFVASE 170 (300)
Q Consensus 158 dgV~~GT~fl~t~ 170 (300)
++|. ||.+....
T Consensus 180 ~~v~-gS~i~~~~ 191 (214)
T 1wbh_A 180 LCIG-GSWLVPAD 191 (214)
T ss_dssp SCEE-EGGGSCHH
T ss_pred eEEE-eccccChh
Confidence 9999 98887553
No 141
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.41 E-value=0.0002 Score=62.82 Aligned_cols=48 Identities=29% Similarity=0.434 Sum_probs=41.2
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+.++.++++.+ ++||++.|||.+.+++..++..|||+|.+|+..+..+
T Consensus 63 ~~~i~~i~~~~---~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~~p 110 (253)
T 1thf_D 63 LELVEKVAEQI---DIPFTVGGGIHDFETASELILRGADKVSINTAAVENP 110 (253)
T ss_dssp HHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHCT
T ss_pred HHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHhCh
Confidence 45566666654 7999999999999999999999999999999988653
No 142
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.0002 Score=63.69 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=41.2
Q ss_pred hhchHHHHHHhhC-CCCCcEEEccCCCChHHHHHHHHC--CCcEEEecccc
Q 022271 119 LISLLPMVVDLIG-DRDIPIIAAGGIVDARGYVAALSL--GAQGICLGTRF 166 (300)
Q Consensus 119 ~~~ll~~v~~~~~-~~~iPViaaGGI~~g~~v~aal~l--GAdgV~~GT~f 166 (300)
.+.++.++.+.+. ..++|||++|||.+.+|+.+++.+ |+++|++|++|
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 4678888888761 004999999999999999999998 99999999998
No 143
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=97.36 E-value=0.0044 Score=53.00 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=92.4
Q ss_pred CCCcHHHHHHHHhCC--ceEEecCC---CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 21 DISGPELVAAVANAG--GLGLLRAP---DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~~---~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
|+++++=+.++.++| .+|++... -+.++++.++..+.+. ..+.-|.++.+.+.++..+.+.+.+.++|-++
T Consensus 8 Git~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~---~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH- 83 (205)
T 1nsj_A 8 GITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELP---PFVFRVGVFVNEEPEKILDVASYVQLNAVQLH- 83 (205)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSC---SSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCC---CCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC-
Confidence 577777677777666 59998421 2356776665544332 34556777888777777888888999999999
Q ss_pred CCCcHHHHHHHHHCCCeEeecc-----------------------------C-----hhchHHHHHHhhCCCCCcEEEcc
Q 022271 96 GEYSEELVLEAHSAGVKVVPQD-----------------------------G-----LISLLPMVVDLIGDRDIPIIAAG 141 (300)
Q Consensus 96 G~~~~~~v~~~~~~G~~v~~~~-----------------------------~-----~~~ll~~v~~~~~~~~iPViaaG 141 (300)
|..+.+.+..++. +..++... | .+++++.+. .. +.|++.||
T Consensus 84 G~e~~~~~~~l~~-~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~-~~---~~p~~LAG 158 (205)
T 1nsj_A 84 GEEPIELCRKIAE-RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYR-DR---FRYLVLSG 158 (205)
T ss_dssp SCCCHHHHHHHHT-TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGG-GG---SSCEEEES
T ss_pred CCCCHHHHHHHhc-CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhh-cC---CCcEEEEC
Confidence 5445677777642 34544320 0 122333221 11 57999999
Q ss_pred CCCChHHHHHHHH-CCCcEEEeccccccC
Q 022271 142 GIVDARGYVAALS-LGAQGICLGTRFVAS 169 (300)
Q Consensus 142 GI~~g~~v~aal~-lGAdgV~~GT~fl~t 169 (300)
|| +++.+..++. .++.||=+.|.+=.+
T Consensus 159 GL-~peNV~~ai~~~~p~gVDvsSGvE~~ 186 (205)
T 1nsj_A 159 GL-NPENVRSAIDVVRPFAVDVSSGVEAF 186 (205)
T ss_dssp SC-CTTTHHHHHHHHCCSEEEESGGGEEE
T ss_pred CC-CHHHHHHHHHhcCCCEEEECCceecC
Confidence 99 7778888876 699999999887643
No 144
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.33 E-value=0.00025 Score=62.66 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=57.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+.|++.|.++- +.. .|. .....+.++.++++.+ ++||++.|||.+.+++..++..|
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d--~~~--------~~~---~~g~~~~~i~~i~~~~---~iPvi~~ggi~~~~~i~~~~~~G 96 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTS--IDR--------DGT---KSGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAG 96 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEE--TTT--------SSC---SSCCCHHHHHHHGGGC---CSCEEEESCCCSTHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEe--cCc--------ccC---CCcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcC
Confidence 4556666667777666531 100 000 0012356777777765 89999999999999999999999
Q ss_pred CcEEEeccccc-cCcccCCCHHHHHHHHc
Q 022271 157 AQGICLGTRFV-ASEESYAHPEYKRKLVE 184 (300)
Q Consensus 157 AdgV~~GT~fl-~t~Es~~~~~~k~~i~~ 184 (300)
||+|.+|+.++ ...+ ++.+++.+..
T Consensus 97 ad~v~lg~~~~~~~~~---~~~~~~~~~~ 122 (266)
T 2w6r_A 97 ADKALAASVFHFREID---MRELKEYLKK 122 (266)
T ss_dssp CSEEECCCCC---------CHHHHHHCC-
T ss_pred CcHhhhhHHHHhCCCC---HHHHHHHHHH
Confidence 99999999998 3111 3556665433
No 145
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.26 E-value=0.00048 Score=60.01 Aligned_cols=47 Identities=32% Similarity=0.487 Sum_probs=41.7
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
..+.++++.+ ++||++.|||.+++++..++.+|||+|.+|+..+..+
T Consensus 64 ~~i~~i~~~~---~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~~p 110 (244)
T 2y88_A 64 ELLAEVVGKL---DVQVELSGGIRDDESLAAALATGCARVNVGTAALENP 110 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHCH
T ss_pred HHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhhCh
Confidence 6677777776 7999999999999999999999999999999987653
No 146
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.25 E-value=0.002 Score=57.79 Aligned_cols=99 Identities=19% Similarity=0.182 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC--cHH----HHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP--HNE----NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~--~~~----~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++|+++++..+.| .++++.... ..+ ..+.+.+.|+++|-++.|-.+ .|. +....
T Consensus 156 ~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~---------~GA----T~edv 221 (288)
T 3oa3_A 156 RYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNG---------PGA----SIENV 221 (288)
T ss_dssp CHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS---------CCC----CHHHH
T ss_pred cHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC---------CCC----CHHHH
Confidence 5678888999998876666 377776532 222 356677889999988766321 010 01134
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEE
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 160 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV 160 (300)
.++.++++... .++||.++|||.|.+++.+++.+||+-+
T Consensus 222 ~lmr~~v~~~g-~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 222 SLMSAVCDSLQ-SETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp HHHHHHHHHSS-SCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 55566664322 2799999999999999999999999943
No 147
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.22 E-value=0.0033 Score=54.57 Aligned_cols=134 Identities=17% Similarity=0.227 Sum_probs=86.5
Q ss_pred HHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh-cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHH
Q 022271 25 PELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELV 103 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~-~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v 103 (300)
.+++.++.++| +.++--. ..++..+ +.|+++++. .+..++.+.+. ..+.++.+++.|+++|... + ...+++
T Consensus 41 ~~~~~al~~gG-v~~iel~-~k~~~~~-~~i~~l~~~~~~~~igagtvl---~~d~~~~A~~aGAd~v~~p-~-~d~~v~ 112 (225)
T 1mxs_A 41 LPLADALAAGG-IRTLEVT-LRSQHGL-KAIQVLREQRPELCVGAGTVL---DRSMFAAVEAAGAQFVVTP-G-ITEDIL 112 (225)
T ss_dssp HHHHHHHHHTT-CCEEEEE-SSSTHHH-HHHHHHHHHCTTSEEEEECCC---SHHHHHHHHHHTCSSEECS-S-CCHHHH
T ss_pred HHHHHHHHHCC-CCEEEEe-cCCccHH-HHHHHHHHhCcccEEeeCeEe---eHHHHHHHHHCCCCEEEeC-C-CCHHHH
Confidence 46777766654 6665332 3444433 456655544 34556766542 4688899999999988654 3 245666
Q ss_pred HHHHHCCCeEeec--------------------cC-----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH-CCC
Q 022271 104 LEAHSAGVKVVPQ--------------------DG-----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGA 157 (300)
Q Consensus 104 ~~~~~~G~~v~~~--------------------~~-----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~-lGA 157 (300)
+..++.|...+.. .+ -...+.+++..+ .++|+++.||| +.+.+..++. .|+
T Consensus 113 ~~~~~~g~~~i~G~~t~~e~~~A~~~Gad~vk~FPa~~~~G~~~lk~i~~~~--~~ipvvaiGGI-~~~N~~~~l~~~Ga 189 (225)
T 1mxs_A 113 EAGVDSEIPLLPGISTPSEIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPF--GDIRFCPTGGV-NPANVRNYMALPNV 189 (225)
T ss_dssp HHHHHCSSCEECEECSHHHHHHHHTTTCCEEEETTHHHHTHHHHHHHHHTTT--TTCEEEEBSSC-CTTTHHHHHHSTTB
T ss_pred HHHHHhCCCEEEeeCCHHHHHHHHHCCCCEEEEccCccccCHHHHHHHHhhC--CCCeEEEECCC-CHHHHHHHHhccCC
Confidence 7667777665531 11 123344444433 27999999999 6779999999 699
Q ss_pred cEEEeccccccCc
Q 022271 158 QGICLGTRFVASE 170 (300)
Q Consensus 158 dgV~~GT~fl~t~ 170 (300)
++|. ||.+....
T Consensus 190 ~~v~-gSai~~~~ 201 (225)
T 1mxs_A 190 MCVG-TTWMLDSS 201 (225)
T ss_dssp CCEE-ECTTSCHH
T ss_pred EEEE-EchhcCch
Confidence 9999 98887643
No 148
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.20 E-value=0.0028 Score=55.59 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=39.3
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
.+.++.++.+.+. ++|||++||+++-+|+.+. ..+++||.+|++|..
T Consensus 183 d~~l~~~l~~~~~--~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~ 229 (243)
T 4gj1_A 183 NVRLYKLIHEIFP--NICIQASGGVASLKDLENL-KGICSGVIVGKALLD 229 (243)
T ss_dssp CHHHHHHHHHHCT--TSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHT
T ss_pred CHHHHHHHHHhcC--CCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHC
Confidence 4568888888752 6999999999999999875 567999999999854
No 149
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.20 E-value=0.00084 Score=63.04 Aligned_cols=82 Identities=23% Similarity=0.291 Sum_probs=53.9
Q ss_pred HHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeecc------------ChhchHHHHHHhhCCCCCcEEEccCCCCh
Q 022271 79 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQD------------GLISLLPMVVDLIGDRDIPIIAAGGIVDA 146 (300)
Q Consensus 79 ~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~------------~~~~ll~~v~~~~~~~~iPViaaGGI~~g 146 (300)
.++.+.+.+.+++..-.+....+..+.+.+.|...+... ..+.-+.++++.. ++||++ |||.+.
T Consensus 147 ~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~---~~pvi~-ggi~t~ 222 (393)
T 2qr6_A 147 RIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL---DVPVIA-GGVNDY 222 (393)
T ss_dssp HHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC---SSCEEE-ECCCSH
T ss_pred HHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc---CCCEEE-CCcCCH
Confidence 345555566666543222223455566666776554210 1334466777765 799999 999999
Q ss_pred HHHHHHHHCCCcEEEecc
Q 022271 147 RGYVAALSLGAQGICLGT 164 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~GT 164 (300)
+++..++.+|||+|.+|+
T Consensus 223 e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHHHHTTTCSEEEESC
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 999999999999999986
No 150
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.19 E-value=0.00062 Score=59.39 Aligned_cols=46 Identities=33% Similarity=0.494 Sum_probs=40.9
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.++.++++.+ ++||++.|||.|++++..++.+|||+|.+|+..+..
T Consensus 65 ~~i~~i~~~~---~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 65 ALIAEVAQAM---DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHHhc---CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhhC
Confidence 5677777766 799999999999999999999999999999988765
No 151
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.13 E-value=0.0032 Score=55.88 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHhhc---CCcEEeeeecCC-------CcH---HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCe
Q 022271 46 EAPDYLRDLIRKTRSLT---ERPFGVGVVLAF-------PHN---ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVK 112 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~---~~P~gvnl~~~~-------~~~---~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~ 112 (300)
.+.+...++++++++.. +.|+-+|..... +.+ ...+.+.+.|+++|-+++ |
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~--~-------------- 181 (263)
T 1w8s_A 118 GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY--T-------------- 181 (263)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC--C--------------
T ss_pred cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC--C--------------
Confidence 35566777777776643 567766643310 111 123556677888777764 1
Q ss_pred EeeccChhchHHHHHHhhCCCCC-cEEEccCCC--ChHHHHHHH----HCCCcEEEeccccccCc
Q 022271 113 VVPQDGLISLLPMVVDLIGDRDI-PIIAAGGIV--DARGYVAAL----SLGAQGICLGTRFVASE 170 (300)
Q Consensus 113 v~~~~~~~~ll~~v~~~~~~~~i-PViaaGGI~--~g~~v~aal----~lGAdgV~~GT~fl~t~ 170 (300)
+....+.++++.+ ++ ||+++|||. |.+++.+.+ ..||+|+.+|+..+..+
T Consensus 182 -----~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~ 238 (263)
T 1w8s_A 182 -----GDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR 238 (263)
T ss_dssp -----SSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTST
T ss_pred -----CCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCc
Confidence 1235566677666 45 999999999 888877666 89999999999988774
No 152
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.11 E-value=0.0027 Score=54.96 Aligned_cols=101 Identities=26% Similarity=0.275 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC--c----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP--H----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~--~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++|.++++..+.+ .++++.... . ....+.+.+.|+++|=++.|-.+. |. +....
T Consensus 101 ~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~---------ga----t~~dv 166 (220)
T 1ub3_A 101 DLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFGPR---------GA----SLEDV 166 (220)
T ss_dssp CHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSC---------CC----CHHHH
T ss_pred CHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCC---------CC----CHHHH
Confidence 5677788888888876554 677665422 1 234567778889998877553210 00 00122
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCc--EEEeccc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ--GICLGTR 165 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAd--gV~~GT~ 165 (300)
.++.++. . .++||.++|||.|.+++.+++.+||+ |+-.|..
T Consensus 167 ~~m~~~v---g-~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~~ 209 (220)
T 1ub3_A 167 ALLVRVA---Q-GRAQVKAAGGIRDRETALRMLKAGASRLGTSSGVA 209 (220)
T ss_dssp HHHHHHH---T-TSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHHH
T ss_pred HHHHHhh---C-CCCeEEEECCCCCHHHHHHHHHCCCcccchhHHHH
Confidence 3333333 1 37999999999999999999999999 6555544
No 153
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.10 E-value=0.0045 Score=53.04 Aligned_cols=114 Identities=10% Similarity=0.028 Sum_probs=73.0
Q ss_pred HHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCCeEe-----e---c-----
Q 022271 54 LIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGVKVV-----P---Q----- 116 (300)
Q Consensus 54 ~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~~v~-----~---~----- 116 (300)
.++.+|+.. +.++-..+-..+......+.+.+.|+++|.++.... ....++.+++.|..++ . .
T Consensus 46 ~i~~l~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l 125 (216)
T 1q6o_A 46 AVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQW 125 (216)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHH
Confidence 466666652 233333332223345566788899999999985322 2355666777777742 2 0
Q ss_pred ------------------cC---hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 ------------------DG---LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 ------------------~~---~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.| ...-+.++++... .++||++.|||. .+.+..++..|||++++||....+
T Consensus 126 ~~~~~~~~vl~~a~~~~~~G~~g~~~~i~~lr~~~~-~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~a 197 (216)
T 1q6o_A 126 RDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSD-MGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRDA 197 (216)
T ss_dssp HHTTCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHH-TTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHTS
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcC-CCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcCC
Confidence 01 1223344544442 258899999998 778889999999999999998765
No 154
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.04 E-value=0.0024 Score=54.49 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=71.1
Q ss_pred HHHHHhh--cCCcEEeeee--cCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHC-CCeEeeccC-----------
Q 022271 55 IRKTRSL--TERPFGVGVV--LAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSA-GVKVVPQDG----------- 118 (300)
Q Consensus 55 i~~~r~~--~~~P~gvnl~--~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~-G~~v~~~~~----------- 118 (300)
++++|+. +..++=++++ ...+ ...++.+.+.|+++|+++.-. ..+.++.+++. |+.+.+..+
T Consensus 43 i~~lr~~~~~~v~~D~kl~DI~~t~-~~~v~~~~~~Gad~vtvh~~~-g~~~i~~~~~~~gv~vl~~t~~~~~~~~~~~~ 120 (208)
T 2czd_A 43 IRRLKEETGVEIIADLKLADIPNTN-RLIARKVFGAGADYVIVHTFV-GRDSVMAVKELGEIIMVVEMSHPGALEFINPL 120 (208)
T ss_dssp HHHHHHHHCCEEEEEEEECSCHHHH-HHHHHHHHHTTCSEEEEESTT-CHHHHHHHHTTSEEEEECCCCSGGGGTTTGGG
T ss_pred HHHHHHcCCCEEEEEeeeCchHHHH-HHHHHHHHhcCCCEEEEeccC-CHHHHHHHHHhCCcEEEEecCCcchhhHHHHH
Confidence 5556665 3333444444 2222 557788889999999998643 35568888777 444443211
Q ss_pred ---------------------hhchHHHHHHhhCCCCCcEEEccCCCC-hHHHHHHHHCCCcEEEeccccccC
Q 022271 119 ---------------------LISLLPMVVDLIGDRDIPIIAAGGIVD-ARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 119 ---------------------~~~ll~~v~~~~~~~~iPViaaGGI~~-g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
...-+.++++... .-++++.|||.. +.++..++.+|||.+.+|+..+.+
T Consensus 121 v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~~~--~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a 191 (208)
T 2czd_A 121 TDRFIEVANEIEPFGVIAPGTRPERIGYIRDRLK--EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA 191 (208)
T ss_dssp HHHHHHHHHHHCCSEEECCCSSTHHHHHHHHHSC--TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS
T ss_pred HHHHHHHHHHhCCcEEEECCCChHHHHHHHHhCC--CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC
Confidence 0112334444431 236789999986 557889999999999999988865
No 155
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.02 E-value=0.0012 Score=56.27 Aligned_cols=61 Identities=26% Similarity=0.341 Sum_probs=48.0
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcC
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEM 185 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a 185 (300)
..++.++.... ++|||+.||+.+.+++.+++..||+||++|++|...+- .....++.+.+.
T Consensus 163 ~~~i~~~~~~~---~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~--~~~~~~~~l~~~ 223 (237)
T 3cwo_X 163 TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREI--DVRELKEYLKKH 223 (237)
T ss_dssp HHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSS--CHHHHHHHHHTT
T ss_pred HHHHHHHHHhc---CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCC--CHHHHHHHHHHC
Confidence 34666666654 79999999999999999999999999999999986542 345566665543
No 156
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.97 E-value=0.0014 Score=57.52 Aligned_cols=69 Identities=17% Similarity=0.265 Sum_probs=56.1
Q ss_pred cHHHHHHHHHCCCeEeec----------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 99 SEELVLEAHSAGVKVVPQ----------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~----------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
|-++.+...+.|+.-+|. ...+.++.++.+.. .+|+-..|||.+-+++..+|.+|||-|.+||..+.
T Consensus 33 P~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~---~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~ 109 (243)
T 4gj1_A 33 PLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEV---SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIK 109 (243)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHC---CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTT
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhc---CCCeEeccccccHHHHHHHHHcCCCEEEEcccccc
Confidence 566777777777766654 22456788888776 79999999999999999999999999999998876
Q ss_pred Cc
Q 022271 169 SE 170 (300)
Q Consensus 169 t~ 170 (300)
.+
T Consensus 110 ~p 111 (243)
T 4gj1_A 110 DA 111 (243)
T ss_dssp CH
T ss_pred CC
Confidence 53
No 157
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.94 E-value=0.0041 Score=54.39 Aligned_cols=96 Identities=19% Similarity=0.172 Sum_probs=60.5
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC--cH----HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP--HN----ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~--~~----~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++|+++++..+.. -++++.... .. ...+.+.+.|+++|-++.|-.+ .|.. ....
T Consensus 125 ~~~~v~~eI~~v~~a~~~~-~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~---------ggAt----~~dv 190 (239)
T 3ngj_A 125 KYDDVEKDVKAVVDASGKA-LTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGT---------HGAT----PEDV 190 (239)
T ss_dssp CHHHHHHHHHHHHHHHTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSS---------CCCC----HHHH
T ss_pred cHHHHHHHHHHHHHHhcCC-ceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCC---------CCCC----HHHH
Confidence 5577888888888775432 355555322 12 2345557889999987755311 0000 0112
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEE
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGI 160 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV 160 (300)
.++.++.. .+++|.++|||.|.+++.+++.+||+-+
T Consensus 191 ~lmr~~vg----~~v~VKasGGIrt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 191 KLMKDTVG----DKALVKAAGGIRTFDDAMKMINNGASRI 226 (239)
T ss_dssp HHHHHHHG----GGSEEEEESSCCSHHHHHHHHHTTEEEE
T ss_pred HHHHHhhC----CCceEEEeCCCCCHHHHHHHHHhcccce
Confidence 33333332 2799999999999999999999999954
No 158
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.93 E-value=0.008 Score=58.77 Aligned_cols=50 Identities=20% Similarity=0.255 Sum_probs=39.9
Q ss_pred hchHHHHHHhhC---CCCCcEEEccCCCChHHHHHHHH--------CCCcEEEeccccccCc
Q 022271 120 ISLLPMVVDLIG---DRDIPIIAAGGIVDARGYVAALS--------LGAQGICLGTRFVASE 170 (300)
Q Consensus 120 ~~ll~~v~~~~~---~~~iPViaaGGI~~g~~v~aal~--------lGAdgV~~GT~fl~t~ 170 (300)
+..+.++++.++ ..++||++-||| +.+.+..++. .|||||.+++.++.++
T Consensus 156 ~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 156 TAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCT
T ss_pred HHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhcCC
Confidence 445666666541 127999999999 8899999998 8999999999998764
No 159
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.93 E-value=0.0009 Score=58.03 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+.|++.+.++--..... + ....+.++.++++.+ ++||++.|||.+.+++..++.+|
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~--------~-----~~~~~~~i~~i~~~~---~ipvi~~g~i~~~~~~~~~~~~G 99 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPE--------G-----RATFIDSVKRVAEAV---SIPVLVGGGVRSLEDATTLFRAG 99 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTT--------T-----HHHHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccc--------C-----CcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcC
Confidence 4566777777887665541100000 0 011345677777776 79999999999999999999999
Q ss_pred CcEEEeccccccC
Q 022271 157 AQGICLGTRFVAS 169 (300)
Q Consensus 157 AdgV~~GT~fl~t 169 (300)
||+|.+|+.++..
T Consensus 100 ad~V~i~~~~~~~ 112 (253)
T 1h5y_A 100 ADKVSVNTAAVRN 112 (253)
T ss_dssp CSEEEESHHHHHC
T ss_pred CCEEEEChHHhhC
Confidence 9999999988754
No 160
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.76 E-value=0.0093 Score=51.73 Aligned_cols=107 Identities=14% Similarity=0.048 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC--c----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP--H----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~--~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++|+++++..+. ..++++.... . ....+.+.+.|+++|-++.|-.+.++-....+.|. .+....
T Consensus 96 ~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~g---At~~dv 171 (226)
T 1vcv_A 96 RWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVH---STPERA 171 (226)
T ss_dssp CHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSS---CCHHHH
T ss_pred CHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCC---CCHHHH
Confidence 568889999999987654 3677665432 2 23467778899999999866544444443322221 111133
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC---CCc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL---GAQ 158 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l---GAd 158 (300)
.++.++.+.+. .++||-++|||.+.+++.+++.+ ||+
T Consensus 172 ~lm~~~i~~~g-~~v~vKaaGGirt~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 172 AAIARYIKEKG-YRLGVKMAGGIRTREQAKAIVDAIGWGED 211 (226)
T ss_dssp HHHHHHHHHHT-CCCEEEEESSCCSHHHHHHHHHHHCSCSC
T ss_pred HHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHCCCC
Confidence 45555544453 26999999999999999999999 998
No 161
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=96.74 E-value=0.012 Score=51.90 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC---cH---HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP---HN---ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~---~~---~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
+.+.+.++|+.+++..+. .-++++.... ++ ...+.+.+.|+++|=++.|-.+ .| .++
T Consensus 141 ~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~---------~G-------AT~ 203 (260)
T 3r12_A 141 EWEYVYEDIRSVVESVKG-KVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGT---------GG-------ATA 203 (260)
T ss_dssp CHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS---------CC-------CCH
T ss_pred cHHHHHHHHHHHHHhcCC-CcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCC---------CC-------CCH
Confidence 567778888888876542 2345555432 12 2355666788888877765321 01 122
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcE
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQG 159 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdg 159 (300)
.-+..+++.+. .+++|-++|||.|.+++.+++.+||+-
T Consensus 204 edV~lm~~~vg-~~v~VKaAGGIrt~~~al~mi~aGA~R 241 (260)
T 3r12_A 204 EDVHLMKWIVG-DEMGVKASGGIRTFEDAVKMIMYGADR 241 (260)
T ss_dssp HHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHcCCce
Confidence 22222333333 379999999999999999999999994
No 162
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.69 E-value=0.058 Score=46.75 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=83.4
Q ss_pred CCCcHHHHHHHHhCC--ceEEecCC---CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 21 DISGPELVAAVANAG--GLGLLRAP---DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~~---~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
|+++++=+.+ .++| .+|++... -+.++++.++.++. ....++.|.++.. ..+..+.+.+.+.++|-++
T Consensus 27 Git~~ed~~a-~~~gaD~iGfIf~~~SpR~V~~~~A~~i~~~---~~~~~~~v~v~v~--~~ei~~~i~~~~ld~vQLH- 99 (228)
T 4aaj_A 27 GIKSLEELEI-VEKHADATGVVVNSNSKRRIPLEKAREIIEN---SAIPVFLVSTMVG--FSEWAMAIERTGAQYIQVH- 99 (228)
T ss_dssp CCCSHHHHHH-HHTTCSEEEEECSSSSTTBCCHHHHHHHHHH---CSSCEEEEECCCC--HHHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHH-HHcCCCEEEEEecCCCCCCCCHHHHHHHHHh---hCCCCEEEeccCc--hHHHHHHHHhccchheecc-
Confidence 5666654544 3555 48888532 13567766554432 2234555555543 3456667778899999999
Q ss_pred CCCcHHHHHHHHH-CCCeEeecc--C-------------------------------------hhchHHHHHHhhCCCCC
Q 022271 96 GEYSEELVLEAHS-AGVKVVPQD--G-------------------------------------LISLLPMVVDLIGDRDI 135 (300)
Q Consensus 96 G~~~~~~v~~~~~-~G~~v~~~~--~-------------------------------------~~~ll~~v~~~~~~~~i 135 (300)
|..+++.++.+++ .|+.++... . .+.+++.+.. +.
T Consensus 100 G~E~~~~~~~l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~~fDW~~~~~~~~-----~~ 174 (228)
T 4aaj_A 100 SNALPQTIDTLKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGKLHDLRVSSLVAR-----KI 174 (228)
T ss_dssp SCCCHHHHHHHHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-------CCCHHHHHHHH-----HS
T ss_pred cccCHHHHHHHhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcCcCChHHHHHhhh-----cC
Confidence 5556777887765 477665320 0 1223333322 47
Q ss_pred cEEEccCCCChHHHHHHHH-CCCcEEEecccc
Q 022271 136 PIIAAGGIVDARGYVAALS-LGAQGICLGTRF 166 (300)
Q Consensus 136 PViaaGGI~~g~~v~aal~-lGAdgV~~GT~f 166 (300)
|+|.|||| +++-+.+|+. .+..||=+-|.+
T Consensus 175 p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 175 PVIVAGGL-NAENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp CEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred CeEEECCC-CHHHHHHHHHHhCCCEEEeCCCC
Confidence 99999999 6788888887 688888887766
No 163
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.64 E-value=0.0097 Score=51.37 Aligned_cols=114 Identities=12% Similarity=0.036 Sum_probs=70.7
Q ss_pred HHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCC---CeEeec----------
Q 022271 54 LIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAG---VKVVPQ---------- 116 (300)
Q Consensus 54 ~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G---~~v~~~---------- 116 (300)
.++++|+.. +.++-..+-..+......+.+.+.|++++.++..... ...++.+++.| ..+..+
T Consensus 48 ~v~~l~~~~p~~~iflDlKl~Dip~t~~~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~ 127 (221)
T 3exr_A 48 LVEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQA 127 (221)
T ss_dssp HHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHH
T ss_pred HHHHHHHhCCCCcEEEEEEeeccHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHH
Confidence 366666653 5555555555444455566788899999998854322 23444455555 333322
Q ss_pred ---------------------cCh---hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 117 ---------------------DGL---ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 117 ---------------------~~~---~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.+. ..-+..+++... .+.+|.+.||| +.+++..+...|||.+++|+.+..+
T Consensus 128 ~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~-~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a 202 (221)
T 3exr_A 128 QQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIE-MGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITEA 202 (221)
T ss_dssp HHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHH-HTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHTS
T ss_pred HHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhc-CCceEEEECCC-CHHHHHHHHHCCCCEEEECchhhCC
Confidence 011 112334444431 25789999999 6677888899999999999876654
No 164
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=96.62 E-value=0.0051 Score=58.00 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhhcC-CcEEeeeecCCC--------c--------HHHHHHH---HHcC--CcEEEEcCCCCcHHHHHHHH
Q 022271 50 YLRDLIRKTRSLTE-RPFGVGVVLAFP--------H--------NENIKAI---LSEK--VAVLQVSWGEYSEELVLEAH 107 (300)
Q Consensus 50 ~l~~~i~~~r~~~~-~P~gvnl~~~~~--------~--------~~~~~~~---~e~g--~~~i~~~~G~~~~~~v~~~~ 107 (300)
-+.+.++.+|+..+ .|+++.+-.+.. + ...++.+ .+.| ++.|.++-+.....
T Consensus 220 ~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~------ 293 (407)
T 3tjl_A 220 LILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGN------ 293 (407)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETT------
T ss_pred HHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCC------
Confidence 45666778887654 388888876432 1 2345556 5667 88888874431100
Q ss_pred HCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC----CCcEEEeccccccCc
Q 022271 108 SAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL----GAQGICLGTRFVASE 170 (300)
Q Consensus 108 ~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l----GAdgV~~GT~fl~t~ 170 (300)
.-.........+..+++.+ ++|||++|||.+.+++.+++.. +||+|.+|+.|+..+
T Consensus 294 ----~~~~~~~~~~~~~~ir~~~---~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNP 353 (407)
T 3tjl_A 294 ----VDVSEEDQAGDNEFVSKIW---KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNP 353 (407)
T ss_dssp ----EECCGGGCCCCSHHHHHHC---CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCT
T ss_pred ----CcCCccchhHHHHHHHHHh---CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCc
Confidence 0000000123456677776 7899999999998877666654 599999999999874
No 165
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=96.41 E-value=0.016 Score=52.34 Aligned_cols=47 Identities=26% Similarity=0.351 Sum_probs=37.0
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChH-----HHHHHHHCCCcEEEeccccccCc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDAR-----GYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~-----~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
..+.++++.. ++||+++||+.... .+..++..||+|+.+|+..+-.+
T Consensus 213 e~~~~vv~~~---~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 213 KGFERIVAGC---PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp TTHHHHHHTC---SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHHHHhC---CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 3566777665 79999999998542 46677789999999999888764
No 166
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.36 E-value=0.0087 Score=57.59 Aligned_cols=74 Identities=19% Similarity=0.154 Sum_probs=56.0
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec--------cccccCcccCCCHHHHHHHHcCCCcce
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG--------TRFVASEESYAHPEYKRKLVEMDKTEY 190 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G--------T~fl~t~Es~~~~~~k~~i~~a~~t~~ 190 (300)
.+.+++++++.+. ++||+ +|+|.+.+++.+++.+|||+|.+| |+++...+++..+.+++....++..++
T Consensus 261 ~~~~i~~l~~~~p--~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~i 337 (491)
T 1zfj_A 261 VLRKIAEIRAHFP--NRTLI-AGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGK 337 (491)
T ss_dssp HHHHHHHHHHHCS--SSCEE-EEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCC--CCcEe-CCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCC
Confidence 4556777777652 69998 999999999999999999999888 888887777777778777654433333
Q ss_pred EEEec
Q 022271 191 TDVFG 195 (300)
Q Consensus 191 t~~~~ 195 (300)
..+.+
T Consensus 338 pvia~ 342 (491)
T 1zfj_A 338 TIIAD 342 (491)
T ss_dssp EEEEE
T ss_pred CEEee
Confidence 44443
No 167
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.33 E-value=0.022 Score=49.45 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCC-------CcH---HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAF-------PHN---ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~-------~~~---~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
+.+.+.++|+.+++..+. .-++++... ..+ ...+.+.+.|+++|-++.|-.+. .|
T Consensus 110 ~~~~v~~ei~~v~~a~~~-~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~--------~g------ 174 (231)
T 3ndo_A 110 DLDAVSADITAVRKAVRA-ATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPS--------GG------ 174 (231)
T ss_dssp CHHHHHHHHHHHHHHTTT-SEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTT--------CS------
T ss_pred cHHHHHHHHHHHHHHccC-CceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCC--------CC------
Confidence 567888889998887642 234655532 111 23456668899999887653210 01
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcE
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQG 159 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdg 159 (300)
.++.-+..+++.+. .+++|-++|||.|.+++.+++.+||+-
T Consensus 175 -At~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~R 215 (231)
T 3ndo_A 175 -ASVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATR 215 (231)
T ss_dssp -CCHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred -CCHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchh
Confidence 12222223333333 279999999999999999999999994
No 168
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.32 E-value=0.0084 Score=52.93 Aligned_cols=67 Identities=22% Similarity=0.273 Sum_probs=57.5
Q ss_pred cHHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 99 SEELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
|.++.+...+.|+..++. .+....+..+++.+ ++||+.-++|.|..++..++.+|||+|.+|+..+-
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v---~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV---DLPLLRKDFVVDPFMLEEARAFGASAALLIVALLG 140 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC---CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHHG
T ss_pred HHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc---CCCEEECCcCCCHHHHHHHHHcCCCEEEECccchH
Confidence 356777777888887765 25677888999887 89999999999999999999999999999999875
No 169
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.09 E-value=0.12 Score=49.14 Aligned_cols=134 Identities=18% Similarity=0.136 Sum_probs=91.7
Q ss_pred CCCcHHHHHHHHhCC--ceEEecCC---CCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcC
Q 022271 21 DISGPELVAAVANAG--GLGLLRAP---DWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 21 g~s~~~la~avs~aG--glG~i~~~---~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~ 95 (300)
|+++++=+.++.++| .+|++... -+.++++.++.++. ...--|+++.+.+.++..+.+.+.+.++|-++
T Consensus 261 Git~~eda~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~-----~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLH- 334 (452)
T 1pii_A 261 GLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAA-----APLQYVGVFRNHDIADVVDKAKVLSLAAVQLH- 334 (452)
T ss_dssp CCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHH-----CCCEEEEEESSCCHHHHHHHHHHHTCSEEEEC-
T ss_pred CCCcHHHHHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHHhc-----CCCCEEEEEeCCCHHHHHHHHHhcCCCEEEEC-
Confidence 577776666667666 59998432 24577777765554 13445888988877778888888999999999
Q ss_pred CCCcHHHHHHHHHC---CCeEeecc---C--------------------------hhchHHHHHHhhCCCCCcEEEccCC
Q 022271 96 GEYSEELVLEAHSA---GVKVVPQD---G--------------------------LISLLPMVVDLIGDRDIPIIAAGGI 143 (300)
Q Consensus 96 G~~~~~~v~~~~~~---G~~v~~~~---~--------------------------~~~ll~~v~~~~~~~~iPViaaGGI 143 (300)
|..+.++++.+++. ++.++... . .+++++. . .+.|++.|||+
T Consensus 335 G~E~~~~~~~l~~~~p~~~~iika~~v~~~~~~~~~~~~d~~LlD~~~GGtG~~fdW~~l~~---~---~~~p~iLAGGL 408 (452)
T 1pii_A 335 GNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNG---Q---SLGNVLLAGGL 408 (452)
T ss_dssp SCCCHHHHHHHHHHSCTTSEEEEEEECSSSCCCCCCTTCCEEEEESCSCCSSCCCCGGGGTT---S---CCTTEEEESSC
T ss_pred CCCCHHHHHHHHhhccCCCcEEEEEecCCccchhhhhcccEEEecCCCCCCCCccCHHHhhc---c---cCCcEEEEcCC
Confidence 55567888887652 55555320 0 1222221 1 15799999999
Q ss_pred CChHHHHHHHHCCCcEEEeccccc
Q 022271 144 VDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 144 ~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
+++-+..++..+..||=+-|.+=
T Consensus 409 -~p~NV~~ai~~~p~gvDvsSGVE 431 (452)
T 1pii_A 409 -GADNCVEAAQTGCAGLDFNSAVE 431 (452)
T ss_dssp -CTTTHHHHHTTCCSEEEECGGGE
T ss_pred -CHHHHHHHHhcCCCEEEeCCcee
Confidence 66778777888999888876654
No 170
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=96.05 E-value=0.01 Score=54.24 Aligned_cols=141 Identities=15% Similarity=0.165 Sum_probs=80.5
Q ss_pred cccC--CccceecCCCCCCCCc------HHHHHHHHhCCceEEecCCCCCCHHHHH-----HHHHHHHhh-cCCcEEeee
Q 022271 5 GMLG--FEYGIVQAPLGPDISG------PELVAAVANAGGLGLLRAPDWEAPDYLR-----DLIRKTRSL-TERPFGVGV 70 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~------~~la~avs~aGglG~i~~~~~~~~~~l~-----~~i~~~r~~-~~~P~gvnl 70 (300)
+++| ++.|++.+||+ +.+. ..|+.++.++|..-.++. +.+. ++ ...+ +|.. .+.|+..|+
T Consensus 51 ~i~g~~l~~P~~iapm~-g~~~~~~~~~~~la~~a~~~G~~~~~~~--~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~ 124 (332)
T 1vcf_A 51 PFLGKTLKAPFLIGAMT-GGEENGERINLALAEAAEALGVGMMLGS--GRIL--LERPEALRSFR-VRKVAPKALLIANL 124 (332)
T ss_dssp EETTEEESSSEEECCCC----CCHHHHHHHHHHHHHHHTCEEEEEE--CHHH--HHCTTTHHHHC-CTTTCSSSCEEEEE
T ss_pred EECCcccCCceEEeccc-cCCcchhHHHHHHHHHHHHcCCCEEeCC--chhc--ccCCCccceEE-eeccCCCceeeccc
Confidence 4566 67899999998 5553 388999999996544443 2111 21 1111 2332 477887776
Q ss_pred ecCC---C-cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC---
Q 022271 71 VLAF---P-HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI--- 143 (300)
Q Consensus 71 ~~~~---~-~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI--- 143 (300)
-... . .+...+.+...+++.+.++... ..+++ . .|-..+ ...+..+.++++ + ++||++=+ |
T Consensus 125 ~~~q~~~~~~~~~~~a~~~~~~~a~~i~~n~-~~~~~---~-~~~~~~--~~~~~~i~~vr~-~---~~Pv~vK~-v~~g 192 (332)
T 1vcf_A 125 GLAQLRRYGRDDLLRLVEMLEADALAFHVNP-LQEAV---Q-RGDTDF--RGLVERLAELLP-L---PFPVMVKE-VGHG 192 (332)
T ss_dssp EGGGGGTCCHHHHHHHHHHHTCSEEEEECCH-HHHHH---T-TSCCCC--TTHHHHHHHHCS-C---SSCEEEEC-SSSC
T ss_pred ChhhhhccChHHHHHHHhhcCCCceeeccch-HHHHh---c-CCCccH--HHHHHHHHHHHc-C---CCCEEEEe-cCCC
Confidence 5321 1 2333333334467777666432 22222 1 121111 123445555555 4 79999864 5
Q ss_pred CChHHHHHHHHCCCcEEEec
Q 022271 144 VDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 144 ~~g~~v~aal~lGAdgV~~G 163 (300)
.+.+++..+..+|+|+|.+.
T Consensus 193 ~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 193 LSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp CCHHHHHHHTTSCCSEEECC
T ss_pred CCHHHHHHHHHcCCCEEEeC
Confidence 78999998889999999993
No 171
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.76 E-value=0.023 Score=50.66 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=55.9
Q ss_pred cHHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 99 SEELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
|.++.....+.|...+.. .+.+..+.++++.+ ++||+.-..|.|..++..+..+|||+|.+++..+
T Consensus 81 p~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v---~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 81 PPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC---SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS---SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc---CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 466777777788766654 25677889999887 8999999999999999999999999999999877
No 172
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.67 E-value=0.072 Score=48.15 Aligned_cols=35 Identities=31% Similarity=0.583 Sum_probs=30.2
Q ss_pred CCc-EEEccCCCCh----HHHHHHHHCCCcEEEeccccccC
Q 022271 134 DIP-IIAAGGIVDA----RGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 134 ~iP-ViaaGGI~~g----~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.+| |+++||+ +. +.+..++..||+||.+|+.....
T Consensus 221 ~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 221 NMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp CSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred CCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 799 9999999 55 34888889999999999988765
No 173
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=95.66 E-value=0.068 Score=48.15 Aligned_cols=87 Identities=15% Similarity=0.209 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhcCC-cEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSLTER-PFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~~~~-P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+.... ++.|-. .+.+.++.+++.|+++|-++-.. + +.+ .++++.
T Consensus 195 i~~ai~~~r~~~~~~kI~vev----~tlee~~eA~~aGaD~I~ld~~~-~-e~l--------------------~~~v~~ 248 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEV----ENLDELDDALKAGADIIMLDNFN-T-DQM--------------------REAVKR 248 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEE----SSHHHHHHHHHTTCSEEEESSCC-H-HHH--------------------HHHHHT
T ss_pred HHHHHHHHHHhCCCCcEEEEe----CCHHHHHHHHHcCCCEEEECCCC-H-HHH--------------------HHHHHH
Confidence 45667777776432 333322 23355666678888888876432 2 222 233333
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
++. ++||.++||| |.+.+.+....|+|++-+|+.
T Consensus 249 ~~~-~~~I~ASGGI-t~~~i~~~a~~GvD~isvGsl 282 (296)
T 1qap_A 249 VNG-QARLEVSGNV-TAETLREFAETGVDFISVGAL 282 (296)
T ss_dssp TCT-TCCEEECCCS-CHHHHHHHHHTTCSEEECSHH
T ss_pred hCC-CCeEEEECCC-CHHHHHHHHHcCCCEEEEeHH
Confidence 322 6899999999 999999999999999999984
No 174
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.64 E-value=0.024 Score=50.45 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=54.8
Q ss_pred cHHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 99 SEELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
|.++.....+.|+..+.. .|.+..+.++++.+ ++||+.-+.|.|..++..+..+|||+|.+|...+-
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v---~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV---SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred HHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC---CCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 455666666777776654 24577888898887 89999999999999999999999999999988664
No 175
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=95.51 E-value=0.034 Score=51.45 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhhc-CCcEEeeeecCCC--------c----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec
Q 022271 50 YLRDLIRKTRSLT-ERPFGVGVVLAFP--------H----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 50 ~l~~~i~~~r~~~-~~P~gvnl~~~~~--------~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~ 116 (300)
-+.+.++++|+.. +.+++|.+..... . ...++.+.+.+++.+.++.|..+.. . ..
T Consensus 204 f~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-----------~~ 271 (358)
T 4a3u_A 204 LLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGT-F-----------GK 271 (358)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCS-S-----------SB
T ss_pred HHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCc-c-----------cc
Confidence 3556777888764 3457777655321 1 1234556677888888876643110 0 00
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccCcc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVASEE 171 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t~E 171 (300)
.....+.+++++.. .+||+ .||+.|++.+.++|.-| ||.|.||+.|++-++
T Consensus 272 ~~~~~~a~~ik~~~---~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPd 323 (358)
T 4a3u_A 272 TDQPKLSPEIRKVF---KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGNPD 323 (358)
T ss_dssp CSSCCCHHHHHHHC---CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHCTT
T ss_pred cccHHHHHHHHHhc---CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhChh
Confidence 11234667777775 56665 67888999999999998 999999999998754
No 176
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.28 E-value=0.012 Score=52.04 Aligned_cols=67 Identities=12% Similarity=-0.024 Sum_probs=52.5
Q ss_pred CcHHHHHHHHHCCCeEeec---c-ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 98 YSEELVLEAHSAGVKVVPQ---D-GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 98 ~~~~~v~~~~~~G~~v~~~---~-~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
.|.++.+..++.|..-++. . .....+.++.+.+ ++||...|||.+- ++.+++ +||+-|.+||..+-.
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~~n~~~i~~i~~~~---~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~~ 109 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGPNNDDAAREALQES---PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFTK 109 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESSSCHHHHHHHHHHS---TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBCT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCCCCHHHHHHHHhcC---CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHhh
Confidence 3677778887776554432 2 2456777887776 7999999999986 999999 999999999998865
No 177
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=95.20 E-value=0.053 Score=48.27 Aligned_cols=91 Identities=12% Similarity=0.072 Sum_probs=59.7
Q ss_pred HHHHHHHHhhcC--CcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 52 RDLIRKTRSLTE--RPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 52 ~~~i~~~r~~~~--~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
.+.++++|+... +++++-. .+.+.++.+++.|+++|-+.... + +.++++. ..+...
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev----~tlee~~~A~~aGaD~I~ld~~~-~-~~l~~~v----------------~~l~~~ 226 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC----ESFEEAKNAMNAGADIVMCDNLS-V-LETKEIA----------------AYRDAH 226 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE----SSHHHHHHHHHHTCSEEEEETCC-H-HHHHHHH----------------HHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEc----CCHHHHHHHHHcCCCEEEECCCC-H-HHHHHHH----------------HHhhcc
Confidence 566777777643 3455422 12355666677889998876432 2 2333211 112221
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
. .++||.++||| |.+.+.+++..|||++-+|+...
T Consensus 227 ~--~~~~i~AsGGI-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 227 Y--PFVLLEASGNI-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C--TTCEEEEESSC-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C--CCcEEEEECCC-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 1 25999999999 99999999999999999999744
No 178
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.04 E-value=0.017 Score=56.69 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=49.3
Q ss_pred cHHHHHHHHHCCCeEeec---cC----------hhchHHHHHHhhCCCCCcEEEccCCCChHH-----------HHHHHH
Q 022271 99 SEELVLEAHSAGVKVVPQ---DG----------LISLLPMVVDLIGDRDIPIIAAGGIVDARG-----------YVAALS 154 (300)
Q Consensus 99 ~~~~v~~~~~~G~~v~~~---~~----------~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-----------v~aal~ 154 (300)
|.++.+...+.|..-++. .+ .+.++.++++.+ ++||++.|||.+.+| +.+++.
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~---~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~ 358 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV---FVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 358 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC---CSCEEEESSCSCEECTTCCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC---CCcEEEeCccccchhcccccchHHHHHHHHHH
Confidence 456667777777654432 11 244555555554 899999999999855 999999
Q ss_pred CCCcEEEecccccc
Q 022271 155 LGAQGICLGTRFVA 168 (300)
Q Consensus 155 lGAdgV~~GT~fl~ 168 (300)
+|||.|.+||..+.
T Consensus 359 aGad~V~igt~~~~ 372 (555)
T 1jvn_A 359 SGADKVSIGTDAVY 372 (555)
T ss_dssp HTCSEEEECHHHHH
T ss_pred cCCCEEEECCHHhh
Confidence 99999999999864
No 179
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.92 E-value=0.23 Score=44.37 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=60.1
Q ss_pred HHHHHHHHhhc--CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 52 RDLIRKTRSLT--ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 52 ~~~i~~~r~~~--~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
.+.++++|+.. +++++|-. .+.+.++.+++.|+++|.+.- ...+.++ ++++.
T Consensus 183 ~~av~~ar~~~~~~~~IgVev----~t~eea~eA~~aGaD~I~ld~--~~~~~~k--------------------~av~~ 236 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEV----RSLEELEEALEAGADLILLDN--FPLEALR--------------------EAVRR 236 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEE----SSHHHHHHHHHHTCSEEEEES--CCHHHHH--------------------HHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEe----CCHHHHHHHHHcCCCEEEECC--CCHHHHH--------------------HHHHH
Confidence 44577777753 25677633 235667777788888888763 2222222 23333
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
++. ++|+.++||| +.+.+.+....|+|+|.+|+....
T Consensus 237 v~~-~ipi~AsGGI-t~eni~~~a~tGvD~IsVgs~~~~ 273 (286)
T 1x1o_A 237 VGG-RVPLEASGNM-TLERAKAAAEAGVDYVSVGALTHS 273 (286)
T ss_dssp HTT-SSCEEEESSC-CHHHHHHHHHHTCSEEECTHHHHS
T ss_pred hCC-CCeEEEEcCC-CHHHHHHHHHcCCCEEEEcHHHcC
Confidence 322 6899999999 589999999999999999875443
No 180
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=94.71 E-value=0.15 Score=44.32 Aligned_cols=94 Identities=17% Similarity=0.243 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhhc---CCcEEeeeecCC--Cc----HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChh
Q 022271 50 YLRDLIRKTRSLT---ERPFGVGVVLAF--PH----NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLI 120 (300)
Q Consensus 50 ~l~~~i~~~r~~~---~~P~gvnl~~~~--~~----~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~ 120 (300)
.+.++|.++++.. +.|+ +++... .. ....+.+.+.|+++|=++.|-.+. .| .+.
T Consensus 117 ~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~~~--------~g-------At~ 179 (234)
T 1n7k_A 117 AVYREVSGIVKLAKSYGAVV--KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVYTK--------GG-------DPV 179 (234)
T ss_dssp HHHHHHHHHHHHHHHTTCEE--EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSSCC--------CC-------SHH
T ss_pred HHHHHHHHHHHHHhhcCCeE--EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCC--------CC-------CCH
Confidence 6677777777653 2454 333321 12 224566677888888777542110 00 011
Q ss_pred chHHH--HHHhhCCCCCcEEEccCCCChHHHHHHHHCCCc--EEEec
Q 022271 121 SLLPM--VVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQ--GICLG 163 (300)
Q Consensus 121 ~ll~~--v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAd--gV~~G 163 (300)
.-+.. +++.+ ++||.++|||.+.+++.+++.+||+ |+-.|
T Consensus 180 ~dv~l~~m~~~v---~v~VKaaGGirt~~~al~~i~aGa~RiG~S~g 223 (234)
T 1n7k_A 180 TVFRLASLAKPL---GMGVKASGGIRSGIDAVLAVGAGADIIGTSSA 223 (234)
T ss_dssp HHHHHHHHHGGG---TCEEEEESSCCSHHHHHHHHHTTCSEEEETTH
T ss_pred HHHHHHHHHHHH---CCCEEEecCCCCHHHHHHHHHcCccccchHHH
Confidence 11112 44445 3899999999999999999999999 55443
No 181
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=94.68 E-value=0.21 Score=43.55 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=67.5
Q ss_pred HHHHHHhh-cCCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcCCCC---cHHHHHHHHHCCC---eEeec--------
Q 022271 54 LIRKTRSL-TERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSWGEY---SEELVLEAHSAGV---KVVPQ-------- 116 (300)
Q Consensus 54 ~i~~~r~~-~~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~G~~---~~~~v~~~~~~G~---~v~~~-------- 116 (300)
.++.+|+. +..++=++++ ..|+ ...++.+.+.|++.|+++.-.. ....++.+++.|. .++..
T Consensus 57 ~v~~lr~~~~~v~lD~kl~-Dip~t~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~ 135 (245)
T 1eix_A 57 FVRELQQRGFDIFLDLKFH-DIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEA 135 (245)
T ss_dssp HHHHHHHTTCCEEEEEEEC-SCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTCCH
T ss_pred HHHHHHHCCCcEEEEeecc-ccHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCH
Confidence 45666665 3445555555 2222 2467788889999999875221 1244445555554 22211
Q ss_pred --------------------------------cChhchHHHHHHhhCCCCCcEEEccCCCChH----------HHHHHHH
Q 022271 117 --------------------------------DGLISLLPMVVDLIGDRDIPIIAAGGIVDAR----------GYVAALS 154 (300)
Q Consensus 117 --------------------------------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~----------~v~aal~ 154 (300)
.+... +.++++... +.+++..|||.... .+..++.
T Consensus 136 ~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~~e-i~~lr~~~~--~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~ 212 (245)
T 1eix_A 136 SDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQE-AVRFKQVFG--QEFKLVTPGIRPQGSEAGDQRRIMTPEQALS 212 (245)
T ss_dssp HHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCGGG-HHHHHHHHC--SSSEEEECCBCCTTCCCTTCCSCBCHHHHHH
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCHHH-HHHHHHhcC--CCCEEEECCcCCCCCCccchhccCCHHHHHH
Confidence 01112 344444442 36899999998531 4778889
Q ss_pred CCCcEEEeccccccC
Q 022271 155 LGAQGICLGTRFVAS 169 (300)
Q Consensus 155 lGAdgV~~GT~fl~t 169 (300)
.|||.+++|+....+
T Consensus 213 aGad~iVvGr~I~~a 227 (245)
T 1eix_A 213 AGVDYMVIGRPVTQS 227 (245)
T ss_dssp TTCSEEEECHHHHTS
T ss_pred cCCCEEEECHHHcCC
Confidence 999999999887764
No 182
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=94.34 E-value=0.052 Score=48.99 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=58.0
Q ss_pred HHHHHHHHhhcC--CcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 52 RDLIRKTRSLTE--RPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 52 ~~~i~~~r~~~~--~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
.+.++++|+... +++.+..- +.+.++.+++.|+++|-++... + +.+.++ +..+...
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev~----tlee~~~A~~aGaD~I~ld~~~-~-~~l~~~----------------v~~l~~~ 241 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVECS----SLQEAVQAAEAGADLVLLDNFK-P-EELHPT----------------ATVLKAQ 241 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEES----SHHHHHHHHHTTCSEEEEESCC-H-HHHHHH----------------HHHHHHH
T ss_pred HHHHHHHHHhCCcCCeEEEecC----CHHHHHHHHHcCCCEEEECCCC-H-HHHHHH----------------HHHhhcc
Confidence 456777776543 34554332 2355666677889988876433 2 223221 1112111
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
. .++||.++||| |.+.+.+....|+|++.+|+..
T Consensus 242 ~--~~~~I~ASGGI-t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 242 F--PSVAVEASGGI-TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp C--TTSEEEEESSC-CTTTHHHHCCTTCCEEECTHHH
T ss_pred C--CCeeEEEECCC-CHHHHHHHHHCCCCEEEEChhh
Confidence 1 25899999999 9999999999999999999843
No 183
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.30 E-value=0.66 Score=40.14 Aligned_cols=156 Identities=18% Similarity=0.208 Sum_probs=82.9
Q ss_pred cCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHHHHHH
Q 022271 7 LGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIKAILS 85 (300)
Q Consensus 7 lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~~~~e 85 (300)
||.+.=++|.-|. ++...+.+.|.+.++-. .+++...+..+.+-+. +--.+-+....+. .+.++.+.+
T Consensus 13 ~~~~~~~~~~~m~------~~~~~l~~~~vv~Vir~---~~~~~a~~~a~al~~g--Gi~~iEvt~~t~~a~e~I~~l~~ 81 (232)
T 4e38_A 13 LGTENLYFQSMMS------TINNQLKALKVIPVIAI---DNAEDIIPLGKVLAEN--GLPAAEITFRSDAAVEAIRLLRQ 81 (232)
T ss_dssp -------CCCCHH------HHHHHHHHHCEEEEECC---SSGGGHHHHHHHHHHT--TCCEEEEETTSTTHHHHHHHHHH
T ss_pred cCchhhHHHHHHH------HHHHHHHhCCEEEEEEc---CCHHHHHHHHHHHHHC--CCCEEEEeCCCCCHHHHHHHHHH
Confidence 3444445554442 35555666677777754 3566555555554432 1123444443333 344555554
Q ss_pred cCCcEEEEcCCC-CcHHHHHHHHHCCCeEeeccCh-hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 86 EKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQDGL-ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 86 ~g~~~i~~~~G~-~~~~~v~~~~~~G~~v~~~~~~-~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.-++.+ +..|. ...+.++.+.++|...++..++ ..++....+. ++|++. |+.|+.++.+|+.+|||.|-+
T Consensus 82 ~~~~~~-iGaGTVlt~~~a~~Ai~AGA~fIvsP~~~~~vi~~~~~~----gi~~ip--Gv~TptEi~~A~~~Gad~vK~- 153 (232)
T 4e38_A 82 AQPEML-IGAGTILNGEQALAAKEAGATFVVSPGFNPNTVRACQEI----GIDIVP--GVNNPSTVEAALEMGLTTLKF- 153 (232)
T ss_dssp HCTTCE-EEEECCCSHHHHHHHHHHTCSEEECSSCCHHHHHHHHHH----TCEEEC--EECSHHHHHHHHHTTCCEEEE-
T ss_pred hCCCCE-EeECCcCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHc----CCCEEc--CCCCHHHHHHHHHcCCCEEEE-
Confidence 323322 22232 2345566666778777765332 2233333332 789888 699999999999999999976
Q ss_pred cccccCcccCCCHHHHHHHHcC
Q 022271 164 TRFVASEESYAHPEYKRKLVEM 185 (300)
Q Consensus 164 T~fl~t~Es~~~~~~k~~i~~a 185 (300)
|-+ +...-..|-+.+...
T Consensus 154 --FPa--~~~gG~~~lkal~~p 171 (232)
T 4e38_A 154 --FPA--EASGGISMVKSLVGP 171 (232)
T ss_dssp --CST--TTTTHHHHHHHHHTT
T ss_pred --CcC--ccccCHHHHHHHHHH
Confidence 443 222124555566553
No 184
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=94.11 E-value=0.089 Score=47.34 Aligned_cols=89 Identities=8% Similarity=0.131 Sum_probs=48.1
Q ss_pred HHHHHHHHHhhcC--CcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHH
Q 022271 51 LRDLIRKTRSLTE--RPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVD 128 (300)
Q Consensus 51 l~~~i~~~r~~~~--~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~ 128 (300)
+.+.++++|+... +++.+..- +.+.++.+++.|+++|-++...| +.+. ++++
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev~----tlee~~~A~~aGaD~I~ld~~~~--~~l~--------------------~~v~ 238 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVECL----SEDEATEAIEAGADVIMLDNFKG--DGLK--------------------MCAQ 238 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECS----SSHHHHHHHHHTCSEEECCC---------------------------------
T ss_pred HHHHHHHHHHhcCcCCeEEEecC----CHHHHHHHHHcCCCEEEECCCCH--HHHH--------------------HHHH
Confidence 4556777777643 34444221 12446666678888887754321 1122 1222
Q ss_pred hhCC-----CCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 129 LIGD-----RDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 129 ~~~~-----~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
.+++ .++||.++||| |.+.+.+....|+|++-+|+..
T Consensus 239 ~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 239 SLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp ----------CCEEEEECCC-CC------CCCSCSEEECGGGT
T ss_pred HhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCEEEEechh
Confidence 2211 14899999999 9999999999999999999984
No 185
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=94.09 E-value=0.086 Score=47.07 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhhcCCcEEeeeecCC---CcH----HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhch
Q 022271 50 YLRDLIRKTRSLTERPFGVGVVLAF---PHN----ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISL 122 (300)
Q Consensus 50 ~l~~~i~~~r~~~~~P~gvnl~~~~---~~~----~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~l 122 (300)
.+.++|+++++.... .-++++... .++ ...+.+.+.|+++|=++.|-.+. |. +.....+
T Consensus 142 ~v~~eI~~v~~a~~~-~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~---------gA----T~edv~l 207 (281)
T 2a4a_A 142 EATKLTQSVKKLLTN-KILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQI---------NA----TPSSVEY 207 (281)
T ss_dssp HHHHHHHHHHTTCTT-SEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSSC---------CC----CHHHHHH
T ss_pred HHHHHHHHHHHHhcC-CceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCC---------CC----CHHHHHH
Confidence 778888888887542 335555532 122 34577788999999887543210 00 0001222
Q ss_pred HHHHHHhh------CCCCCcEEEccCCCChHHHHHHHHCCCc
Q 022271 123 LPMVVDLI------GDRDIPIIAAGGIVDARGYVAALSLGAQ 158 (300)
Q Consensus 123 l~~v~~~~------~~~~iPViaaGGI~~g~~v~aal~lGAd 158 (300)
+.++++.. .+.+++|-++|||.|.+++.+++.+||+
T Consensus 208 m~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 208 IIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 33333211 0237999999999999999999998876
No 186
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=93.98 E-value=0.17 Score=46.61 Aligned_cols=146 Identities=16% Similarity=0.102 Sum_probs=85.5
Q ss_pred cccC--CccceecCCCCCCCCcHHHHHHHHhCCceEEecC---------CC-----------------C--CCHHHHHHH
Q 022271 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRA---------PD-----------------W--EAPDYLRDL 54 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~---------~~-----------------~--~~~~~l~~~ 54 (300)
+++| ++.||+.|.=. .-.+.+.......+| +|++-. ++ + ...+.+.+.
T Consensus 40 ~~~Gl~~~NPv~lAAG~-~~~~~e~~~~l~~~G-~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 117 (354)
T 4ef8_A 40 NLLNNTFANPFMNAAGV-MCTTTEELVAMTESA-SGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAY 117 (354)
T ss_dssp EETTEEESSSEEECTTS-SCSSHHHHHHHHHSS-CSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHH
T ss_pred EECCEECCCCCEeccCC-CCCCHHHHHHHHHcC-CCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHH
Confidence 3445 58899986632 235788888888877 555411 11 1 124555555
Q ss_pred HHHHHhhcCCcEEeeeecCCCc--HHHHHHHH---HcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec--cChhchHHHHH
Q 022271 55 IRKTRSLTERPFGVGVVLAFPH--NENIKAIL---SEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ--DGLISLLPMVV 127 (300)
Q Consensus 55 i~~~r~~~~~P~gvnl~~~~~~--~~~~~~~~---e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~--~~~~~ll~~v~ 127 (300)
+++.++..+.|+++|+....+. .+.++.+. +.+++.|.++++||-.+ |..-+.. ..+..++..++
T Consensus 118 l~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~--------gg~~l~~~~e~~~~il~av~ 189 (354)
T 4ef8_A 118 AAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP--------GKPQVAYDFDAMRQCLTAVS 189 (354)
T ss_dssp HHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST--------TSCCGGGSHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC--------CchhhccCHHHHHHHHHHHH
Confidence 5554444578999999875432 34455555 46899999999997431 2222211 12345666666
Q ss_pred HhhCCCCCcEEEccCCC-ChHHHHHHH----HCC-CcEEEec
Q 022271 128 DLIGDRDIPIIAAGGIV-DARGYVAAL----SLG-AQGICLG 163 (300)
Q Consensus 128 ~~~~~~~iPViaaGGI~-~g~~v~aal----~lG-AdgV~~G 163 (300)
+++ ++||++=-... |..++.++. ..| +|+|.+-
T Consensus 190 ~~~---~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 190 EVY---PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHC---CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred Hhh---CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEe
Confidence 665 68887643322 444443333 466 9999863
No 187
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.62 E-value=0.18 Score=46.60 Aligned_cols=66 Identities=27% Similarity=0.376 Sum_probs=49.7
Q ss_pred cCCCCcHHHHHHHHHCCCeEeec---cC----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 94 SWGEYSEELVLEAHSAGVKVVPQ---DG----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 94 ~~G~~~~~~v~~~~~~G~~v~~~---~~----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
+.|..+.+.++.+.++|+.+++. .+ .+..+.++++.+ ++||++ |.+.+.+.+..+..+|||+|.+|
T Consensus 101 ~ig~~~~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~---~~~Viv-g~v~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 101 AIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM---NIDVIV-GNVVTEEATKELIENGADGIKVG 173 (361)
T ss_dssp EECTTCHHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC---CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred EeCCCHHHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc---CCcEEE-ccCCCHHHHHHHHHcCcCEEEEe
Confidence 33443467788888999988763 11 234566666665 789887 77899999999999999999996
No 188
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=93.48 E-value=0.27 Score=45.47 Aligned_cols=84 Identities=26% Similarity=0.189 Sum_probs=56.1
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCc--HHHHHHHHHCCCeEeecc---C----hhchHHHHHHhhCCCCCcEEEccCCCCh
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYS--EELVLEAHSAGVKVVPQD---G----LISLLPMVVDLIGDRDIPIIAAGGIVDA 146 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~--~~~v~~~~~~G~~v~~~~---~----~~~ll~~v~~~~~~~~iPViaaGGI~~g 146 (300)
.++..+.+.+.+. .+....|.++ .+.++++.++|+.++... + ....+..+++... ++||++ |++.|.
T Consensus 77 ~ee~~~~i~~~~~-~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~--~~~Vi~-G~V~T~ 152 (361)
T 3r2g_A 77 IEENIQEFKKCKG-PVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLG--SRCIMA-GNVATY 152 (361)
T ss_dssp HHHHHHHHHTCCS-CCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHT--TCEEEE-EEECSH
T ss_pred HHHHHHHHhhcce-EEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcC--CCeEEE-cCcCCH
Confidence 3555555544432 2223335432 456777788998877541 1 2346666776652 688886 779999
Q ss_pred HHHHHHHHCCCcEEEec
Q 022271 147 RGYVAALSLGAQGICLG 163 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~G 163 (300)
+++..+..+|||+|.+|
T Consensus 153 e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 153 AGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999995
No 189
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=93.45 E-value=0.61 Score=40.21 Aligned_cols=37 Identities=30% Similarity=0.553 Sum_probs=34.9
Q ss_pred CCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 134 DIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 134 ~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++|+..|||.++.++..+...|+||+.+|++++-++
T Consensus 173 ~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~ 209 (226)
T 1w0m_A 173 EVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAK 209 (226)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCS
T ss_pred CCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCc
Confidence 6899999999999999999999999999999999764
No 190
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=92.88 E-value=0.65 Score=39.98 Aligned_cols=37 Identities=19% Similarity=0.454 Sum_probs=34.9
Q ss_pred CCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCc
Q 022271 134 DIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 134 ~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
+++|+..|||.++.++..+...|+||+.+|++++-++
T Consensus 176 ~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~ 212 (225)
T 1hg3_A 176 EVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAK 212 (225)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCS
T ss_pred CCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCc
Confidence 6899999999999999999999999999999999764
No 191
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=92.87 E-value=0.11 Score=45.78 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHhhcC-CcEEeeeecCC---CcH----HHHHHHHHcCCcEEEEcCCCC----cHHHHHHHHHCCCeEe
Q 022271 47 APDYLRDLIRKTRSLTE-RPFGVGVVLAF---PHN----ENIKAILSEKVAVLQVSWGEY----SEELVLEAHSAGVKVV 114 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~-~P~gvnl~~~~---~~~----~~~~~~~e~g~~~i~~~~G~~----~~~~v~~~~~~G~~v~ 114 (300)
+.+.+.++|+++++... .+.-++++... .++ ...+.+.+.|+++|=++.|-. ..+.+
T Consensus 115 ~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v----------- 183 (260)
T 1p1x_A 115 NEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESA----------- 183 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHH-----------
T ss_pred CHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHH-----------
Confidence 44677788888877642 12234555432 122 345677788888887774431 11212
Q ss_pred eccChhchHHHHHHhh-CCCCCcEEEccCCCChHHHHHHHHCCCc
Q 022271 115 PQDGLISLLPMVVDLI-GDRDIPIIAAGGIVDARGYVAALSLGAQ 158 (300)
Q Consensus 115 ~~~~~~~ll~~v~~~~-~~~~iPViaaGGI~~g~~v~aal~lGAd 158 (300)
.++.++.+.. .+.+++|-++|||.|.+++.+++.+||+
T Consensus 184 ------~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 184 ------RIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp ------HHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 1333332211 0237999999999999999999999876
No 192
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=92.40 E-value=2.8 Score=37.53 Aligned_cols=46 Identities=24% Similarity=0.377 Sum_probs=29.5
Q ss_pred hhchHHHHHHhhCCCCCcEEEc-----------cCCCCh------HHHHHHHHCCCcEEEecccccc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAA-----------GGIVDA------RGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaa-----------GGI~~g------~~v~aal~lGAdgV~~GT~fl~ 168 (300)
.+..+|.+++ + ++||+.. ||-+.| .-..+|.++||||+++=+.|--
T Consensus 203 dl~~i~~lk~-~---~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~tp 265 (298)
T 3fs2_A 203 DMRALPIMAG-L---GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHEDP 265 (298)
T ss_dssp CTTHHHHHHT-T---TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEESSG
T ss_pred CHHHHHHHHH-c---CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecCCh
Confidence 3667888877 5 7999882 333344 2245889999999999666543
No 193
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.28 E-value=1.2 Score=39.77 Aligned_cols=87 Identities=17% Similarity=0.262 Sum_probs=59.2
Q ss_pred HHHHHHHHHhh-cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSL-TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~-~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+. ..+|+.|-. .+.+.++.+++.|+++|-+.-. ++ +.+++ +++.
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv----~tl~ea~eAl~aGaD~I~LDn~-~~-~~l~~--------------------av~~ 238 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEV----TNLDELNQAIAAKADIVMLDNF-SG-EDIDI--------------------AVSI 238 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEE----SSHHHHHHHHHTTCSEEEEESC-CH-HHHHH--------------------HHHH
T ss_pred HHHHHHHHHhhCCCCcEEEEe----CCHHHHHHHHHcCCCEEEEcCC-CH-HHHHH--------------------HHHh
Confidence 55667777765 235555522 2456777788889999988632 22 22332 2233
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
++. ++++.++||| +.+.+.++...|+|.+-+|+-
T Consensus 239 ~~~-~v~ieaSGGI-t~~~i~~~a~tGVD~IsvGal 272 (287)
T 3tqv_A 239 ARG-KVALEVSGNI-DRNSIVAIAKTGVDFISVGAI 272 (287)
T ss_dssp HTT-TCEEEEESSC-CTTTHHHHHTTTCSEEECSHH
T ss_pred hcC-CceEEEECCC-CHHHHHHHHHcCCCEEEEChh
Confidence 322 6899999999 788899999999999999964
No 194
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=92.17 E-value=0.76 Score=39.85 Aligned_cols=35 Identities=23% Similarity=0.197 Sum_probs=28.1
Q ss_pred CcEEEccCCCCh-H---------HHHHHHHCCCcEEEeccccccC
Q 022271 135 IPIIAAGGIVDA-R---------GYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 135 iPViaaGGI~~g-~---------~v~aal~lGAdgV~~GT~fl~t 169 (300)
.+++..|||... . .+..++..|||.+++|+..+.+
T Consensus 177 ~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I~~a 221 (246)
T 2yyu_A 177 SFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSLTRA 221 (246)
T ss_dssp TSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHHHTS
T ss_pred CCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhhcCC
Confidence 459999999743 2 3778889999999999887765
No 195
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=91.88 E-value=0.35 Score=43.21 Aligned_cols=116 Identities=18% Similarity=0.051 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHhhcCCcEEeeeecCCC---cHH----HHHHHHHcCCcEEEEcCCCC----cHHHHHHHHHCCCeEeec
Q 022271 48 PDYLRDLIRKTRSLTERPFGVGVVLAFP---HNE----NIKAILSEKVAVLQVSWGEY----SEELVLEAHSAGVKVVPQ 116 (300)
Q Consensus 48 ~~~l~~~i~~~r~~~~~P~gvnl~~~~~---~~~----~~~~~~e~g~~~i~~~~G~~----~~~~v~~~~~~G~~v~~~ 116 (300)
.+.+.++|+++++... +.-++++.... +++ ..+.+.+.|+++|-+|.|-. ..+.+..+++.=-.....
T Consensus 134 ~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~ 212 (297)
T 4eiv_A 134 ESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVR 212 (297)
T ss_dssp HHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 4678888889988764 45678777542 233 45677789999998876632 112222211100000000
Q ss_pred cChhchHHHHHHh-hCCCCCcEEEc-cCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 117 DGLISLLPMVVDL-IGDRDIPIIAA-GGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 117 ~~~~~ll~~v~~~-~~~~~iPViaa-GGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
...-..+.-+... ..+.++-|=++ |||.|.+++.+++.+..+ +|..|+
T Consensus 213 ~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~~wl 262 (297)
T 4eiv_A 213 ENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGPRSI 262 (297)
T ss_dssp ------------------CCEEEEECTTCCHHHHHHHHHHHHHH---HCGGGC
T ss_pred ccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCcccc
Confidence 0000000000000 00136889999 999999999999996555 666555
No 196
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=91.87 E-value=1.4 Score=39.89 Aligned_cols=87 Identities=15% Similarity=0.233 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+.. .+|+.|-+ .+.+.++.+++.|+++|-+.-.. + +.++ ++++.
T Consensus 218 i~~Av~~ar~~~p~~kIeVEV----dtldea~eAl~aGaD~I~LDn~~-~-~~l~--------------------~av~~ 271 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVET----ETLAELEEAISAGADIIMLDNFS-L-EMMR--------------------EAVKI 271 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEE----SSHHHHHHHHHTTCSEEEEESCC-H-HHHH--------------------HHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEE----CCHHHHHHHHHcCCCEEEECCCC-H-HHHH--------------------HHHHH
Confidence 445666676653 34444422 23456777778888888886432 2 2233 23333
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
++. ++++.++||| |.+.+.+....|+|.+.+|+.
T Consensus 272 l~~-~v~ieaSGGI-t~~~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 272 NAG-RAALENSGNI-TLDNLKECAETGVDYISVGAL 305 (320)
T ss_dssp HTT-SSEEEEESSC-CHHHHHHHHTTTCSEEECTHH
T ss_pred hCC-CCeEEEECCC-CHHHHHHHHHcCCCEEEECce
Confidence 322 6999999999 688899999999999999983
No 197
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=91.58 E-value=5.9 Score=33.78 Aligned_cols=148 Identities=15% Similarity=0.218 Sum_probs=81.5
Q ss_pred CCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHHHHHHcCCcEEEEcCCCC-c
Q 022271 22 ISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIKAILSEKVAVLQVSWGEY-S 99 (300)
Q Consensus 22 ~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~G~~-~ 99 (300)
.+..++...+.+.+.+.++-. .+++.+.+.++++-+.. -+ .+.+....+. .+.++.+.+.-++++. ..|.+ .
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~---~~~~~~~~~~~al~~gG-v~-~iel~~k~~~~~~~i~~l~~~~~~l~v-gaGtvl~ 78 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIAL---DNADDILPLADTLAKNG-LS-VAEITFRSEAAADAIRLLRANRPDFLI-AAGTVLT 78 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECC---SSGGGHHHHHHHHHHTT-CC-EEEEETTSTTHHHHHHHHHHHCTTCEE-EEESCCS
T ss_pred cchHHHHHHHHHCCeEEEEeC---CCHHHHHHHHHHHHHcC-CC-EEEEeccCchHHHHHHHHHHhCcCcEE-eeCcEee
Confidence 455566666777777777653 35555555555543321 11 2333332222 3445544443334332 22332 2
Q ss_pred HHHHHHHHHCCCeEeeccC-hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHH
Q 022271 100 EELVLEAHSAGVKVVPQDG-LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEY 178 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~~~-~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~ 178 (300)
.+-++.+.++|...++..+ ...++...++ . ++|++. |+.|..++.+++.+|||.|.+ |- .+......+
T Consensus 79 ~d~~~~A~~aGAd~v~~p~~d~~v~~~ar~-~---g~~~i~--Gv~t~~e~~~A~~~Gad~vk~---Fp--a~~~gG~~~ 147 (224)
T 1vhc_A 79 AEQVVLAKSSGADFVVTPGLNPKIVKLCQD-L---NFPITP--GVNNPMAIEIALEMGISAVKF---FP--AEASGGVKM 147 (224)
T ss_dssp HHHHHHHHHHTCSEEECSSCCHHHHHHHHH-T---TCCEEC--EECSHHHHHHHHHTTCCEEEE---TT--TTTTTHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHH-h---CCCEEe--ccCCHHHHHHHHHCCCCEEEE---ee--CccccCHHH
Confidence 4556666677777766432 2233444444 3 677776 499999999999999999998 43 232223555
Q ss_pred HHHHHcCC
Q 022271 179 KRKLVEMD 186 (300)
Q Consensus 179 k~~i~~a~ 186 (300)
-+.+...-
T Consensus 148 lk~l~~~~ 155 (224)
T 1vhc_A 148 IKALLGPY 155 (224)
T ss_dssp HHHHHTTT
T ss_pred HHHHHhhC
Confidence 56666543
No 198
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.56 E-value=0.43 Score=40.88 Aligned_cols=63 Identities=22% Similarity=0.294 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCC
Q 022271 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 157 (300)
Q Consensus 78 ~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGA 157 (300)
+..+.+++.|++++.+.+-.| ..+..+.++++.+ +-++|.+|-+.|.+++.+++.+||
T Consensus 29 ~~a~al~~gGi~~iEvt~~t~-------------------~a~~~I~~l~~~~---p~~~IGAGTVlt~~~a~~ai~AGA 86 (217)
T 3lab_A 29 PMAKALVAGGVHLLEVTLRTE-------------------AGLAAISAIKKAV---PEAIVGAGTVCTADDFQKAIDAGA 86 (217)
T ss_dssp HHHHHHHHTTCCEEEEETTST-------------------THHHHHHHHHHHC---TTSEEEEECCCSHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEeCCCc-------------------cHHHHHHHHHHHC---CCCeEeeccccCHHHHHHHHHcCC
Confidence 445555666666666654332 2345566677776 347999999999999999999999
Q ss_pred cEEEe
Q 022271 158 QGICL 162 (300)
Q Consensus 158 dgV~~ 162 (300)
+.++.
T Consensus 87 ~fivs 91 (217)
T 3lab_A 87 QFIVS 91 (217)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 98865
No 199
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.46 E-value=0.53 Score=42.66 Aligned_cols=150 Identities=11% Similarity=0.137 Sum_probs=79.3
Q ss_pred ccC--CccceecCCCCCCCCcHHHHHHHHhCCceEEecCC---------CC------------------CCHHHHHHHHH
Q 022271 6 MLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAP---------DW------------------EAPDYLRDLIR 56 (300)
Q Consensus 6 ~lg--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~---------~~------------------~~~~~l~~~i~ 56 (300)
++| ++.||+.+++. ..+.++..+.++.| +|++..+ +. .+...+++.++
T Consensus 49 i~g~~l~npi~~aag~--~~~~~~~~~~a~~G-~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~ 125 (336)
T 1f76_A 49 CMGLTFKNPLGLAAGL--DKDGECIDALGAMG-FGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVE 125 (336)
T ss_dssp ETTEEESSSEEECTTS--STTCCCHHHHHHTT-CSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHH
T ss_pred ECCEEcCCCcEeCccc--CCcHHHHHHHHHcC-ccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHH
Confidence 445 56899998642 34456777777765 6654111 00 00011234444
Q ss_pred HHHhh-cCCcEEeeeecCCC------cHHHHHHHH--HcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec-cChhchHHHH
Q 022271 57 KTRSL-TERPFGVGVVLAFP------HNENIKAIL--SEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-DGLISLLPMV 126 (300)
Q Consensus 57 ~~r~~-~~~P~gvnl~~~~~------~~~~~~~~~--e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-~~~~~ll~~v 126 (300)
.+++. .+.|+++|+..+.. .++..+.+. +.+++.|.+++++|... |...... .-+..++..|
T Consensus 126 ~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~--------g~~~~~~~~~~~~il~~v 197 (336)
T 1f76_A 126 NVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP--------GLRTLQYGEALDDLLTAI 197 (336)
T ss_dssp HHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST--------TGGGGGSHHHHHHHHHHH
T ss_pred HHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC--------CcccccCHHHHHHHHHHH
Confidence 45443 35699999987641 123333222 24799999999886311 1110100 1133455666
Q ss_pred HHhhC------CCCCcEEEc--cCCC--ChHH-HHHHHHCCCcEEEecccc
Q 022271 127 VDLIG------DRDIPIIAA--GGIV--DARG-YVAALSLGAQGICLGTRF 166 (300)
Q Consensus 127 ~~~~~------~~~iPViaa--GGI~--~g~~-v~aal~lGAdgV~~GT~f 166 (300)
++.+. +.++||++= .++. +... +..+...|+|+|.+....
T Consensus 198 r~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 198 KNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred HHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCc
Confidence 65541 125888763 3332 1122 345556999999986543
No 200
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=91.43 E-value=1.3 Score=39.43 Aligned_cols=92 Identities=17% Similarity=0.169 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+.. ..++.|-+. ..+.++.+++.|+++|.+.-- .|. .+.+. +..+...
T Consensus 181 i~~av~~ar~~~~~~~I~Vev~----t~eea~eal~aGaD~I~LDn~-~~~-~~~~~----------------v~~l~~~ 238 (284)
T 1qpo_A 181 VVDALRAVRNAAPDLPCEVEVD----SLEQLDAVLPEKPELILLDNF-AVW-QTQTA----------------VQRRDSR 238 (284)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES----SHHHHHHHGGGCCSEEEEETC-CHH-HHHHH----------------HHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEeC----CHHHHHHHHHcCCCEEEECCC-CHH-HHHHH----------------HHHhhcc
Confidence 455677777653 225555333 357778888889999888742 232 23221 1122222
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
. .++++.++||| +.+.+.++...|+|.+.+|+..-
T Consensus 239 ~--~~v~ieaSGGI-t~~~i~~~a~tGVD~isvG~l~~ 273 (284)
T 1qpo_A 239 A--PTVMLESSGGL-SLQTAATYAETGVDYLAVGALTH 273 (284)
T ss_dssp C--TTCEEEEESSC-CTTTHHHHHHTTCSEEECGGGTS
T ss_pred C--CCeEEEEECCC-CHHHHHHHHhcCCCEEEECHHHc
Confidence 1 26899999999 78899999999999999998543
No 201
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=91.22 E-value=0.69 Score=42.43 Aligned_cols=144 Identities=10% Similarity=0.072 Sum_probs=83.9
Q ss_pred cccC--CccceecCCCCCCCCcHHHHHHHHhCCceEEecCCC--------------------------C--CCHHHHHHH
Q 022271 5 GMLG--FEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD--------------------------W--EAPDYLRDL 54 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~--------------------------~--~~~~~l~~~ 54 (300)
+++| ++.||+.|.= ..-.+.+....+...| +|++-... + ...+.+.+.
T Consensus 41 ~~~Gl~~~NPv~lAaG-~~~~~~e~~~~~~~~G-~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 118 (345)
T 3oix_A 41 TIGSFDFDNCLMNAAG-VYCMTREELAAIDHSE-AGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDY 118 (345)
T ss_dssp EETTEEESCSEEECTT-SSCSSHHHHHHHHTSS-CSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHH
T ss_pred EECCEECCCCCEEcCC-CCCCCHHHHHHHHHcC-CCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHH
Confidence 3445 5889998742 1124678888888877 66653211 1 123555555
Q ss_pred HHHH-HhhcCCcEEeeeecCCCc--HHHHHHHHHcCCc-EEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhh
Q 022271 55 IRKT-RSLTERPFGVGVVLAFPH--NENIKAILSEKVA-VLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLI 130 (300)
Q Consensus 55 i~~~-r~~~~~P~gvnl~~~~~~--~~~~~~~~e~g~~-~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~ 130 (300)
+++. ++..+.|+++|+....+. .+.++.+.+.+.+ .|.++++||-.+ |...+. .....+.++.+++
T Consensus 119 l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~--------G~~~l~--~~~e~l~~il~av 188 (345)
T 3oix_A 119 VTELQKQPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP--------GXPQIA--YDFETTDQILSEV 188 (345)
T ss_dssp HHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST--------TCCCGG--GCHHHHHHHHHHH
T ss_pred HHHHhhccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC--------Cchhhc--CCHHHHHHHHHHH
Confidence 5553 234678999999875432 3445666667877 999999997421 322111 1223445555544
Q ss_pred CC-CCCcEEE--ccCCCChHHHHHHHH-CCCcEEE
Q 022271 131 GD-RDIPIIA--AGGIVDARGYVAALS-LGAQGIC 161 (300)
Q Consensus 131 ~~-~~iPVia--aGGI~~g~~v~aal~-lGAdgV~ 161 (300)
++ .++||++ .-+ .+..++++++. +||+++.
T Consensus 189 ~~~~~~PV~vKi~p~-~~~~~~a~~~~~aga~~i~ 222 (345)
T 3oix_A 189 FTYFTKPLGIKLPPY-FDIVHFDQAAAIFNXYPLT 222 (345)
T ss_dssp TTTCCSCEEEEECCC-CCHHHHHHHHHHHTTSCCS
T ss_pred HHHhCCCeEEEECCC-CCHHHHHHHHHHhCCCceE
Confidence 32 2678764 333 36666665554 7888775
No 202
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.11 E-value=0.72 Score=41.40 Aligned_cols=87 Identities=13% Similarity=0.196 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+.. .+|+-|= ..+.+.++.+++.|+++|-+.-.. +.+ +++ +++.
T Consensus 196 i~~Av~~~r~~~p~~~ieVE----vdtlde~~eAl~aGaD~I~LDn~~-~~~-l~~--------------------av~~ 249 (298)
T 3gnn_A 196 VGEALDAAFALNAEVPVQIE----VETLDQLRTALAHGARSVLLDNFT-LDM-MRD--------------------AVRV 249 (298)
T ss_dssp HHHHHHHHHHHC--CCCEEE----ESSHHHHHHHHHTTCEEEEEESCC-HHH-HHH--------------------HHHH
T ss_pred HHHHHHHHHHhCCCCCEEEE----eCCHHHHHHHHHcCCCEEEECCCC-HHH-HHH--------------------HHHH
Confidence 445666666652 2333322 223456777778888888886443 222 322 2222
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
+. .++++.++||| |.+.+.++...|+|++-+|+.
T Consensus 250 i~-~~v~ieaSGGI-~~~~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 250 TE-GRAVLEVSGGV-NFDTVRAIAETGVDRISIGAL 283 (298)
T ss_dssp HT-TSEEEEEESSC-STTTHHHHHHTTCSEEECGGG
T ss_pred hC-CCCeEEEEcCC-CHHHHHHHHHcCCCEEEECCe
Confidence 22 26899999999 778889999999999999983
No 203
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=91.10 E-value=0.62 Score=37.78 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=54.5
Q ss_pred HHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhCC---CCCcEEEccCCCChHHHHHHHH
Q 022271 82 AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIGD---RDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 82 ~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~~---~~iPViaaGGI~~g~~v~aal~ 154 (300)
.+...|.+++.+....|++++++.+++.+..++.. ...+..++++.+.+++ .++||+++|-+. .++...+-.
T Consensus 41 ~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~-~~~~~~l~~ 119 (161)
T 2yxb_A 41 ALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIP-IPDLEPLRS 119 (161)
T ss_dssp HHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCC-HHHHHHHHH
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCc-hhcHHHHHH
Confidence 34457888887765567788888888887777653 2345556666655532 268888877654 456666678
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.|+|++.-
T Consensus 120 ~G~d~v~~ 127 (161)
T 2yxb_A 120 LGIREIFL 127 (161)
T ss_dssp TTCCEEEC
T ss_pred CCCcEEEC
Confidence 99998774
No 204
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=91.08 E-value=0.42 Score=42.69 Aligned_cols=92 Identities=12% Similarity=0.076 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhc--CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHH
Q 022271 51 LRDLIRKTRSLT--ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVD 128 (300)
Q Consensus 51 l~~~i~~~r~~~--~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~ 128 (300)
+.+.++++|+.. +++++|-. .+.+.++.+++.|+++|.+.-- .+ +.++++ +..+..
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV----~tleea~eA~~aGaD~I~LDn~-~~-e~l~~a----------------v~~l~~ 236 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEV----ENLEDALRAVEAGADIVMLDNL-SP-EEVKDI----------------SRRIKD 236 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEE----SSHHHHHHHHHTTCSEEEEESC-CH-HHHHHH----------------HHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEe----CCHHHHHHHHHcCCCEEEECCC-CH-HHHHHH----------------HHHhhc
Confidence 455677777763 25666632 2357777788889999888632 22 223321 111222
Q ss_pred hhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 129 LIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 129 ~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
.. .++|+.++||| +.+.+.++...|+|++.+|+...
T Consensus 237 ~~--~~v~ieASGGI-t~eni~~~a~tGVD~IsvGslt~ 272 (285)
T 1o4u_A 237 IN--PNVIVEVSGGI-TEENVSLYDFETVDVISSSRLTL 272 (285)
T ss_dssp HC--TTSEEEEEECC-CTTTGGGGCCTTCCEEEEGGGTS
T ss_pred cC--CCceEEEECCC-CHHHHHHHHHcCCCEEEEeHHHc
Confidence 11 26899999999 67889999999999999998544
No 205
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.99 E-value=0.59 Score=43.25 Aligned_cols=61 Identities=28% Similarity=0.389 Sum_probs=46.0
Q ss_pred HHHHHHHHHCCCeEeecc---C----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 100 EELVLEAHSAGVKVVPQD---G----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~~---~----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.+.++.+.++|+.+++.. + .+..+.++++... ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p--~v~Vi~-G~v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP--HLEIIG-GNVATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT--TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEe-eeeCCHHHHHHHHHcCCCEEEEe
Confidence 577888889999887631 1 2344556666542 678766 77999999999999999999995
No 206
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.78 E-value=2.4 Score=39.34 Aligned_cols=151 Identities=17% Similarity=0.100 Sum_probs=85.1
Q ss_pred cceecCCCCCCCCcH----HHHHHHHhCCceEEecCC--------CC--CCHHHHHHHHHHHHhhcCCcEEeeeecCC--
Q 022271 11 YGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAP--------DW--EAPDYLRDLIRKTRSLTERPFGVGVVLAF-- 74 (300)
Q Consensus 11 ~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~--------~~--~~~~~l~~~i~~~r~~~~~P~gvnl~~~~-- 74 (300)
.++|.||.+ +-+. +++.++.++|.--+.... .| ...+.+ +.+.++++..+.||..-.+-..
T Consensus 143 ~~~Iigpcs--ves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~Gl~~~te~~d~~~~ 219 (385)
T 3nvt_A 143 PVFVFGPCS--VESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEYGLGVISEIVTPADI 219 (385)
T ss_dssp CEEEEECSB--CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEEECCSGGGH
T ss_pred eEEEEEeCC--cCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHcCCEEEEecCCHHHH
Confidence 357777875 5554 666777888865443221 01 234444 4555666556667655443211
Q ss_pred -----------------CcHHHHHHHHHcCCcEEEEcCC-CCcHHH---HHHHHHCCC---eEeec-cC----------h
Q 022271 75 -----------------PHNENIKAILSEKVAVLQVSWG-EYSEEL---VLEAHSAGV---KVVPQ-DG----------L 119 (300)
Q Consensus 75 -----------------~~~~~~~~~~e~g~~~i~~~~G-~~~~~~---v~~~~~~G~---~v~~~-~~----------~ 119 (300)
.+.+.++.+.+.+.+++..... ..+.++ ++.+...|. .+.+. .+ .
T Consensus 220 ~~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ld 299 (385)
T 3nvt_A 220 EVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLD 299 (385)
T ss_dssp HHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCC
T ss_pred HHHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccC
Confidence 1246677777777777765522 223333 344455553 23331 11 2
Q ss_pred hchHHHHHHhhCCCCCcEEEc----cCCCCh--HHHHHHHHCCCcEEEeccccc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAA----GGIVDA--RGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaa----GGI~~g--~~v~aal~lGAdgV~~GT~fl 167 (300)
+..+|.+++.. ++||+.. +|-.+- .-..+|.++||+|+++=+.|-
T Consensus 300 l~~i~~lk~~~---~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~ 350 (385)
T 3nvt_A 300 ISAVPILKKET---HLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPD 350 (385)
T ss_dssp TTHHHHHHHHB---SSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSC
T ss_pred HHHHHHHHHhc---CCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 45588888776 7999765 221111 234578899999999976554
No 207
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=90.66 E-value=0.15 Score=47.70 Aligned_cols=50 Identities=20% Similarity=0.197 Sum_probs=38.5
Q ss_pred HHHhhCCCCCcEEEccCCCChHHHHHHHH-CCCcEEEeccccccCcccCCCHHHHHHHHc
Q 022271 126 VVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICLGTRFVASEESYAHPEYKRKLVE 184 (300)
Q Consensus 126 v~~~~~~~~iPViaaGGI~~g~~v~aal~-lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~ 184 (300)
+++.+ ++|||++|||.+..++++.+. -+||.|.||+.||+-++ +-+++.+
T Consensus 313 ir~~~---~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPd------l~~k~~~ 363 (400)
T 4gbu_A 313 VYSIW---KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPD------LVDRLEK 363 (400)
T ss_dssp HHHHC---CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTT------HHHHHHH
T ss_pred HHHHh---CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcH------HHHHHHc
Confidence 44444 799999999998888777665 47999999999998754 4455554
No 208
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=90.42 E-value=1.3 Score=39.68 Aligned_cols=88 Identities=14% Similarity=0.171 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhc-CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHh
Q 022271 51 LRDLIRKTRSLT-ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDL 129 (300)
Q Consensus 51 l~~~i~~~r~~~-~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~ 129 (300)
+.+.++++|+.. .+|+-| .....+.++.+++.|+++|-+.- ..| +.+++ +++.
T Consensus 194 i~~Av~~ar~~~p~~kIeV----Ev~tl~e~~eAl~aGaDiImLDn-~s~-~~l~~--------------------av~~ 247 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAI----ECDNISQVEESLSNNVDMILLDN-MSI-SEIKK--------------------AVDI 247 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEE----EESSHHHHHHHHHTTCSEEEEES-CCH-HHHHH--------------------HHHH
T ss_pred HHHHHHHHHHhCCCCCEEE----EECCHHHHHHHHHcCCCEEEECC-CCH-HHHHH--------------------HHHh
Confidence 456677777652 344433 22345778888888999998863 223 33332 2223
Q ss_pred hCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 130 IGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 130 ~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
+++ ++.+.++||| +.+.+.++...|+|.+.+|+-.
T Consensus 248 ~~~-~v~leaSGGI-t~~~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 248 VNG-KSVLEVSGCV-NIRNVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp HTT-SSEEEEESSC-CTTTHHHHHTTTCSEEECGGGT
T ss_pred hcC-ceEEEEECCC-CHHHHHHHHHcCCCEEEeCccc
Confidence 322 6899999999 7788999999999999999643
No 209
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=90.30 E-value=2.2 Score=43.15 Aligned_cols=115 Identities=20% Similarity=0.216 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhhc-CCcE-EeeeecCCCc---HHHHH-HHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cC
Q 022271 49 DYLRDLIRKTRSLT-ERPF-GVGVVLAFPH---NENIK-AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DG 118 (300)
Q Consensus 49 ~~l~~~i~~~r~~~-~~P~-gvnl~~~~~~---~~~~~-~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~ 118 (300)
+.+++.++...+.. .+|. -+..+..+.+ ...+. .+...|.+++....-.|++++++.+++.+..++.. ..
T Consensus 588 e~lr~~~~~~~~~~g~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~~~ 667 (762)
T 2xij_A 588 TSAIKRVHKFMEREGRRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHAVGVSTLAAG 667 (762)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEECSSC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHHHHHHHHHHcCCCEEEEeeecHH
Confidence 45555555543322 3443 2222222222 34444 33467999998765567899999999999888764 33
Q ss_pred hhchHHHHHHhhCC---CCCcEEEccCCCChHHHHHHHHCCCcEEEe-cc
Q 022271 119 LISLLPMVVDLIGD---RDIPIIAAGGIVDARGYVAALSLGAQGICL-GT 164 (300)
Q Consensus 119 ~~~ll~~v~~~~~~---~~iPViaaGGI~~g~~v~aal~lGAdgV~~-GT 164 (300)
...+++++.+.+++ .+++|++ ||+.-..+...+..+|+|++.- ||
T Consensus 668 ~~~~~~~vi~~Lr~~G~~dv~Viv-GG~~P~~d~~~l~~~GaD~~f~pgt 716 (762)
T 2xij_A 668 HKTLVPELIKELNSLGRPDILVMC-GGVIPPQDYEFLFEVGVSNVFGPGT 716 (762)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEEEE-EESCCGGGHHHHHHHTCCEEECTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEE-eCCCCcccHHHHHhCCCCEEeCCCC
Confidence 56678888877642 2566655 5544454777788899999876 55
No 210
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=89.90 E-value=0.35 Score=38.14 Aligned_cols=77 Identities=10% Similarity=-0.005 Sum_probs=39.2
Q ss_pred HcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhC--C-CCCcEEEccCCCC-hHH----HHHH
Q 022271 85 SEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIG--D-RDIPIIAAGGIVD-ARG----YVAA 152 (300)
Q Consensus 85 e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~--~-~~iPViaaGGI~~-g~~----v~aa 152 (300)
..|.+++.+....|++++++.+++.+..++.. ......++++.+.++ + .+++|+.+|.... ..+ ...+
T Consensus 29 ~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~ 108 (137)
T 1ccw_A 29 NAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRF 108 (137)
T ss_dssp HTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHH
T ss_pred HCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHH
Confidence 34555555443344555555555544444432 112222333333321 1 2688988887532 233 3347
Q ss_pred HHCCCcEEE
Q 022271 153 LSLGAQGIC 161 (300)
Q Consensus 153 l~lGAdgV~ 161 (300)
..+|+|++.
T Consensus 109 ~~~G~d~~~ 117 (137)
T 1ccw_A 109 KDMGYDRVY 117 (137)
T ss_dssp HHTTCSEEC
T ss_pred HHCCCCEEE
Confidence 789999886
No 211
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=89.83 E-value=0.59 Score=39.21 Aligned_cols=65 Identities=17% Similarity=0.259 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCc-EEEccCCCChHHHHHHHHCC
Q 022271 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIP-IIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 78 ~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iP-ViaaGGI~~g~~v~aal~lG 156 (300)
+.++.+.+.|++.|.+....+. .+..+.++.+.. ++| ++.+|++.+.+++..++.+|
T Consensus 23 ~~~~~~~~~G~~~i~l~~~~~~-------------------~~~~i~~i~~~~---~~~l~vg~g~~~~~~~i~~a~~~G 80 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPLNSPQ-------------------WEQSIPAIVDAY---GDKALIGAGTVLKPEQVDALARMG 80 (212)
T ss_dssp HHHHHHHHHTCCEEEEETTSTT-------------------HHHHHHHHHHHH---TTTSEEEEECCCSHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEeCCChh-------------------HHHHHHHHHHhC---CCCeEEEeccccCHHHHHHHHHcC
Confidence 4455666667777766543321 123445555554 455 45678999999999999999
Q ss_pred CcEEEecc
Q 022271 157 AQGICLGT 164 (300)
Q Consensus 157 AdgV~~GT 164 (300)
||+|.+|+
T Consensus 81 ad~V~~~~ 88 (212)
T 2v82_A 81 CQLIVTPN 88 (212)
T ss_dssp CCEEECSS
T ss_pred CCEEEeCC
Confidence 99998775
No 212
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=89.45 E-value=2.3 Score=42.79 Aligned_cols=116 Identities=23% Similarity=0.200 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHhhc-CCcE-EeeeecCCCc---HHHHHHH-HHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----c
Q 022271 48 PDYLRDLIRKTRSLT-ERPF-GVGVVLAFPH---NENIKAI-LSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----D 117 (300)
Q Consensus 48 ~~~l~~~i~~~r~~~-~~P~-gvnl~~~~~~---~~~~~~~-~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~ 117 (300)
.+.|+..++...+.. .+|. -+-.+..+.+ ...+..+ ...|.+++....-.|++++++.+++.+.+++.. .
T Consensus 579 fe~Lr~~~~~~~~~~g~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~adiVglSsl~~ 658 (727)
T 1req_A 579 VEEARELVEEFEQAEGRRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVSSLAG 658 (727)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTTBCHHHHHHHHHHTTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHHcCCCEEEEeeecH
Confidence 355665555554332 3443 2222222222 3444433 457999988765567899999999999888765 2
Q ss_pred ChhchHHHHHHhhCC---CCCcEEEccCCCChHHHHHHHHCCCcEEEe-cc
Q 022271 118 GLISLLPMVVDLIGD---RDIPIIAAGGIVDARGYVAALSLGAQGICL-GT 164 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~---~~iPViaaGGI~~g~~v~aal~lGAdgV~~-GT 164 (300)
..+.+++++.+.+++ .+++|++.|.+- ..+...+...|+|++.- ||
T Consensus 659 ~~~~~~~~vi~~L~~~G~~~i~VivGG~~p-~~d~~~l~~~GaD~~f~~gt 708 (727)
T 1req_A 659 GHLTLVPALRKELDKLGRPDILITVGGVIP-EQDFDELRKDGAVEIYTPGT 708 (727)
T ss_dssp CHHHHHHHHHHHHHHTTCTTSEEEEEESCC-GGGHHHHHHTTEEEEECTTC
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEcCCCc-cccHHHHHhCCCCEEEcCCc
Confidence 356677888777642 256766655444 44777788899999876 54
No 213
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.84 E-value=0.74 Score=44.29 Aligned_cols=61 Identities=26% Similarity=0.378 Sum_probs=48.0
Q ss_pred HHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 100 EELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.+.++.+.++|+.++.. ...+..+.++++... ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p--~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYP--HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT--TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCC--CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 46677777889887764 124567777777652 688887 88999999999999999999986
No 214
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=88.81 E-value=0.94 Score=43.48 Aligned_cols=61 Identities=31% Similarity=0.397 Sum_probs=46.5
Q ss_pred HHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 100 EELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.+.++.+.++|+.++.. ...+..+.++++... ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p--~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFP--DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCT--TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCC--CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 45666777888887753 124466777777652 688877 77999999999999999999985
No 215
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.71 E-value=0.43 Score=44.69 Aligned_cols=60 Identities=28% Similarity=0.371 Sum_probs=44.7
Q ss_pred HHHHHHHHHCCCeEeec---cCh----hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 100 EELVLEAHSAGVKVVPQ---DGL----ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~---~~~----~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.+.++.+.++|+.++.. .+. ...+.++++.. ++||++ |++.+.+.+..+..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~---~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM---NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC---CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC---CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 46777788889888753 221 33444444443 688886 78999999999999999999996
No 216
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=88.23 E-value=1.6 Score=38.00 Aligned_cols=77 Identities=14% Similarity=0.223 Sum_probs=54.6
Q ss_pred HHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhCC--CCCcEEEccCCCChHHHHHHHH
Q 022271 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIGD--RDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 81 ~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~~--~~iPViaaGGI~~g~~v~aal~ 154 (300)
..+...|.+++.+....|++++++.+++.+..++.. ..++..++++.+.+++ .++||++.|.+.+. +.++ .
T Consensus 145 ~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~~-~~~~--~ 221 (258)
T 2i2x_B 145 ALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVNQ-DFVS--Q 221 (258)
T ss_dssp HHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCCH-HHHH--T
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCCH-HHHH--H
Confidence 344568999998877788899999988877776653 3345566776666532 36999999988884 4433 6
Q ss_pred CCCcEE
Q 022271 155 LGAQGI 160 (300)
Q Consensus 155 lGAdgV 160 (300)
.|||+.
T Consensus 222 igad~~ 227 (258)
T 2i2x_B 222 FALGVY 227 (258)
T ss_dssp STTEEE
T ss_pred cCCeEE
Confidence 788754
No 217
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.19 E-value=3.3 Score=36.52 Aligned_cols=107 Identities=12% Similarity=0.138 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHHH----HHCCCeEeecc
Q 022271 50 YLRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLEA----HSAGVKVVPQD 117 (300)
Q Consensus 50 ~l~~~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~~----~~~G~~v~~~~ 117 (300)
.+.+..++.|+...+.|-.=++.-+|+ .+.++.+.+.|+|+|.+.. ..| ..++|++. -++|..+ .
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~---~ 82 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTP---D 82 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCH---H
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH---H
Confidence 455666666665455554344445564 4567888889999999853 222 12345443 2466332 2
Q ss_pred ChhchHHHHHHh-hCCCCCcEEEccCCCC-------hHHHHHHHHCCCcEEEec
Q 022271 118 GLISLLPMVVDL-IGDRDIPIIAAGGIVD-------ARGYVAALSLGAQGICLG 163 (300)
Q Consensus 118 ~~~~ll~~v~~~-~~~~~iPViaaGGI~~-------g~~v~aal~lGAdgV~~G 163 (300)
..+.++.++++. . ++||+.-+ ..+ .+=+..+...|+||+.+-
T Consensus 83 ~~~~~v~~~r~~~~---~~Pivlm~-Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 83 ICFELIAQIRARNP---ETPIGLLM-YANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp HHHHHHHHHHHHCT---TSCEEEEE-CHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHhcCC---CCCEEEEe-cCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 357788888876 4 79998864 222 223667778999999885
No 218
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=87.99 E-value=2.3 Score=37.45 Aligned_cols=107 Identities=14% Similarity=0.199 Sum_probs=68.0
Q ss_pred HHHHHHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHHHH----HCCCeEeecc
Q 022271 50 YLRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLEAH----SAGVKVVPQD 117 (300)
Q Consensus 50 ~l~~~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~~~----~~G~~v~~~~ 117 (300)
.+.+..++.|+...+.+.-=++..+|+ .+.++.+.+.|+|+|.+.. ..| ..++|+... +.|..+ .
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~---~ 80 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTS---S 80 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCH---H
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCH---H
Confidence 455666666665555564455555664 4668888899999998852 222 124555443 456322 2
Q ss_pred ChhchHHHHHHh-hCCCCCcEEEccCCCCh-------HHHHHHHHCCCcEEEec
Q 022271 118 GLISLLPMVVDL-IGDRDIPIIAAGGIVDA-------RGYVAALSLGAQGICLG 163 (300)
Q Consensus 118 ~~~~ll~~v~~~-~~~~~iPViaaGGI~~g-------~~v~aal~lGAdgV~~G 163 (300)
..+.++.++++. . ++||+.-+ ..++ +=+..+...|+||+.+-
T Consensus 81 ~~~~~v~~ir~~~~---~~Pivlm~-Y~npv~~~g~e~f~~~~~~aGvdgvii~ 130 (267)
T 3vnd_A 81 DCFDIITKVRAQHP---DMPIGLLL-YANLVFANGIDEFYTKAQAAGVDSVLIA 130 (267)
T ss_dssp HHHHHHHHHHHHCT---TCCEEEEE-CHHHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHhcCC---CCCEEEEe-cCcHHHHhhHHHHHHHHHHcCCCEEEeC
Confidence 357788888776 4 79998863 4343 23566677999999985
No 219
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.90 E-value=14 Score=32.75 Aligned_cols=164 Identities=13% Similarity=0.041 Sum_probs=88.5
Q ss_pred CccccccCCccceecCCCCCC-CCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc---CCcEEe
Q 022271 1 MGWRGMLGFEYGIVQAPLGPD-ISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT---ERPFGV 68 (300)
Q Consensus 1 ~~~~~~lg~~~Pii~apM~~g-~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~---~~P~gv 68 (300)
|+.+++-|+ +|-+.-||.-| +.. .+++.-..++|.=|++.+|. .++.++-++.++.+.+.. +.|+-+
T Consensus 4 m~~~~~~Gv-~~a~vTPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 4 MDKNIIIGA-MTALITPFKNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp CCCCCCCEE-EEECCCCEETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CcCCcCCce-eEeeecCcCCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 555566666 44444576211 222 36666667788778776542 357788778888777654 347766
Q ss_pred eeecCCCc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEee-----------------------
Q 022271 69 GVVLAFPH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVP----------------------- 115 (300)
Q Consensus 69 nl~~~~~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~----------------------- 115 (300)
+.-..... .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..++.++.
T Consensus 83 Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~ 162 (301)
T 3m5v_A 83 GAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDC 162 (301)
T ss_dssp ECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcC
Confidence 55433211 3345555666776665421 1111 12222111 12333321
Q ss_pred ------c--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 116 ------Q--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 116 ------~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
. .+.+..+.++++.. .+..| ..|. ...+..++.+|++|++-|+..++.++
T Consensus 163 pnivgiKdssgd~~~~~~~~~~~--~~f~v-~~G~---d~~~~~~l~~G~~G~is~~~n~~P~~ 220 (301)
T 3m5v_A 163 ENIYGVKEASGNIDKCVDLLAHE--PRMML-ISGE---DAINYPILSNGGKGVISVTSNLLPDM 220 (301)
T ss_dssp TTEEEEEECSSCHHHHHHHHHHC--TTSEE-EECC---GGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred CCEEEEEeCCCCHHHHHHHHHhC--CCeEE-EEcc---HHHHHHHHHcCCCEEEehHHHhhHHH
Confidence 1 12334444555443 14444 3442 34577889999999999998887754
No 220
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=87.80 E-value=6.6 Score=33.59 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=39.9
Q ss_pred HHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH----------HHHHHHCCCcEEEeccccccC
Q 022271 107 HSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG----------YVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 107 ~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~----------v~aal~lGAdgV~~GT~fl~t 169 (300)
.+.|..-+. .+. .-+.++++... +.+++..|||.-... ...++..|||.+++|+..+.+
T Consensus 152 ~~~G~~g~v-~~~-~~i~~lr~~~~--~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I~~a 220 (239)
T 1dbt_A 152 EESGLDGVV-CSV-HEAKAIYQAVS--PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKA 220 (239)
T ss_dssp HHTTCSEEE-CCG-GGHHHHTTTSC--TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTS
T ss_pred HHhCCCEEE-ECH-HHHHHHHHhcC--CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhhcCC
Confidence 445544332 222 45566665542 468999999985433 377889999999999988765
No 221
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=87.05 E-value=7.6 Score=32.50 Aligned_cols=56 Identities=20% Similarity=0.313 Sum_probs=37.0
Q ss_pred HHHHHHHHCCCeEeeccC-hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 101 ELVLEAHSAGVKVVPQDG-LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~~-~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++.+.++|...++... ...++...++ . ++|++. |+.|..++.++..+|||.|.+
T Consensus 74 d~~~~A~~~GAd~v~~~~~d~~v~~~~~~-~---g~~~i~--G~~t~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGLLEEVAALAQA-R---GVPYLP--GVLTPTEVERALALGLSALKF 130 (207)
T ss_dssp HHHHHHHHHTCSEEEESSCCHHHHHHHHH-H---TCCEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEEEcCCCCHHHHHHHHH-h---CCCEEe--cCCCHHHHHHHHHCCCCEEEE
Confidence 445555566666665422 2223333332 3 678776 499999999999999999988
No 222
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.99 E-value=3.3 Score=38.14 Aligned_cols=146 Identities=17% Similarity=0.235 Sum_probs=85.4
Q ss_pred cccC--CccceecCCCCCCCCc------HHHHHHHHhCCceEEecCCC--CCCHHHHHHHHHHHHhhcCCcEEeeeecCC
Q 022271 5 GMLG--FEYGIVQAPLGPDISG------PELVAAVANAGGLGLLRAPD--WEAPDYLRDLIRKTRSLTERPFGVGVVLAF 74 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~------~~la~avs~aGglG~i~~~~--~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~ 74 (300)
+++| +++||+.+||+ |.+. ..|+.++.+.|..-.++... ..+|+. ....-.|...+.|+..|+-...
T Consensus 79 ~i~g~~l~~Pi~iapMt-gg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~--~~~~v~r~~P~~~~ianig~~~ 155 (365)
T 3sr7_A 79 HFAGQDFDFPFYINAMT-GGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDD--TSYQVKKSRPHLLLATNIGLDK 155 (365)
T ss_dssp EETTEEESSSEEEECC-----CCCHHHHHHHHHHHHHHTCCEEC-------------------------CCEEEEEETTS
T ss_pred EECCEEccCceEecccc-CCCcchhHHHHHHHHHHHHcCCCeecccccccccCccc--cceEehhhCCCCcEEEEeCCCC
Confidence 3455 57799999998 5554 35999989988766555421 113432 1111122235678878887665
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC---CChHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI---VDARGYVA 151 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI---~~g~~v~a 151 (300)
+.++..+.+.+.+++.+.++.. +..+.+ +..|-.-+ ...+..+.++++.+ ++||++-+ + .+.+++..
T Consensus 156 ~~e~~~~~ve~~~adal~ihln-~~qe~~---~p~Gd~~~--~~~~~~I~~l~~~~---~~PVivK~-vg~g~s~e~A~~ 225 (365)
T 3sr7_A 156 PYQAGLQAVRDLQPLFLQVHIN-LMQELL---MPEGEREF--RSWKKHLSDYAKKL---QLPFILKE-VGFGMDVKTIQT 225 (365)
T ss_dssp CHHHHHHHHHHHCCSCEEEEEC-HHHHHT---SSSSCCCC--HHHHHHHHHHHHHC---CSCEEEEE-CSSCCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecc-cccccc---CCCCCCcH--HHHHHHHHHHHHhh---CCCEEEEE-CCCCCCHHHHHH
Confidence 5556667777889999988754 222222 11221000 02336777888876 79999984 7 68899999
Q ss_pred HHHCCCcEEEec
Q 022271 152 ALSLGAQGICLG 163 (300)
Q Consensus 152 al~lGAdgV~~G 163 (300)
+..+|||+|.++
T Consensus 226 l~~aGad~I~V~ 237 (365)
T 3sr7_A 226 AIDLGVKTVDIS 237 (365)
T ss_dssp HHHHTCCEEECC
T ss_pred HHHcCCCEEEEe
Confidence 999999999994
No 223
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.57 E-value=1.2 Score=42.92 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=46.2
Q ss_pred HHHHHHHHHCCCeEeec-------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 100 EELVLEAHSAGVKVVPQ-------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~-------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
.+.++.+.++|+.++.. .+.+.++.++++... ++||+ +|+|.+.+++..+..+|||+|.+|
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~--~~~vi-~g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYP--SLNII-AGNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCT--TSEEE-EEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCC--CceEE-eeeeccHHHHHHHHHhCCCEEEEC
Confidence 34566677888887754 124567777777652 57777 588999999999999999999984
No 224
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=86.10 E-value=3.6 Score=37.39 Aligned_cols=44 Identities=27% Similarity=0.340 Sum_probs=31.4
Q ss_pred hHHHHHHhhCCCCCcEE-EccCCCChHHH----HHHHHCCC--cEEEeccccccC
Q 022271 122 LLPMVVDLIGDRDIPII-AAGGIVDARGY----VAALSLGA--QGICLGTRFVAS 169 (300)
Q Consensus 122 ll~~v~~~~~~~~iPVi-aaGGI~~g~~v----~aal~lGA--dgV~~GT~fl~t 169 (300)
.+.++.++. ++|+| .+||. +.++. ..|+..|| .||.+|+.....
T Consensus 236 ~f~~~~~a~---~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 236 AFREQEAST---DLPYIYLSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHHHHHHTC---SSCEEEECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred HHHHHHhcC---CCCEEEECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHh
Confidence 366666665 79965 79998 45454 45566899 999999876654
No 225
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=86.00 E-value=7.9 Score=32.99 Aligned_cols=112 Identities=15% Similarity=0.058 Sum_probs=57.4
Q ss_pred HHHHHhhcCCcEEeeeecCCCc---HHHHHHHHHcCCcEEEEcCCCCc---HHHHHHHHHCCCeEee--c---cC-----
Q 022271 55 IRKTRSLTERPFGVGVVLAFPH---NENIKAILSEKVAVLQVSWGEYS---EELVLEAHSAGVKVVP--Q---DG----- 118 (300)
Q Consensus 55 i~~~r~~~~~P~gvnl~~~~~~---~~~~~~~~e~g~~~i~~~~G~~~---~~~v~~~~~~G~~v~~--~---~~----- 118 (300)
++++|+..+.++-..+-..+-. ...++.+.+.|++.++++.-... ...++.+++.|..++. . .+
T Consensus 56 v~~l~~~~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~ 135 (228)
T 3m47_A 56 IAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFI 135 (228)
T ss_dssp HHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTH
T ss_pred HHHHHhcCCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHH
Confidence 4455553344444444433322 34778888899999988742211 2334444444544432 1 00
Q ss_pred -----------------------h-hchHHHHHHhhCCCCCcEEEccCCCCh-HHHHHHHHCCCcEEEeccccccC
Q 022271 119 -----------------------L-ISLLPMVVDLIGDRDIPIIAAGGIVDA-RGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 119 -----------------------~-~~ll~~v~~~~~~~~iPViaaGGI~~g-~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+ ..-+.++++... .+.+ +..+||+-. .+. .++..|||.+++|+....+
T Consensus 136 ~~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~~-~~~~-iv~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 136 QGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIG-QDSF-LISPGVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCSSCHHHHHHHHHHHC-SSSE-EEECC----------CGGGTCSEEEECHHHHTS
T ss_pred HHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhcC-CCCE-EEecCcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 0 112344555442 1244 477888643 246 8888999999999887654
No 226
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=85.62 E-value=5.2 Score=31.05 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+.+..|. ..-+.++.++++.-...++|||.--+-.+.++..+++.+|
T Consensus 47 ~~al~~~~~~~~DlillD~~MP~-----------------mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~G 109 (134)
T 3to5_A 47 LTALPMLKKGDFDFVVTDWNMPG-----------------MQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAG 109 (134)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSS-----------------SCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEcCCCCC-----------------CCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCC
Confidence 44455555555666666555431 2245677777753222379999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 110 a~~yl~ 115 (134)
T 3to5_A 110 VNGYIV 115 (134)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 998654
No 227
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=85.27 E-value=1.9 Score=37.01 Aligned_cols=63 Identities=25% Similarity=0.183 Sum_probs=41.3
Q ss_pred HHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEE-----ccC---CC--ChHHHHHHHHCCCcEEEeccccccCc
Q 022271 104 LEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIA-----AGG---IV--DARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 104 ~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPVia-----aGG---I~--~g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
....+.|+..+- .+....+.++++.+ ++||++ -|| +- +-+++.+++..|||.|.+++.....+
T Consensus 43 ~a~~~~Ga~~i~-~~~~~~i~~ir~~v---~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p 115 (232)
T 3igs_A 43 LAAEQAGAVAVR-IEGIDNLRMTRSLV---SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQRP 115 (232)
T ss_dssp HHHHHTTCSEEE-EESHHHHHHHHTTC---CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCS
T ss_pred HHHHHCCCeEEE-ECCHHHHHHHHHhc---CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccCCH
Confidence 333445554433 23456667788776 799975 144 33 34688999999999999998765443
No 228
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=84.75 E-value=12 Score=33.74 Aligned_cols=84 Identities=14% Similarity=0.088 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCcHHHHHHHH---------HCCCeEeec-cChhchHHHHHHhhCCCCCcEEEc-------
Q 022271 78 ENIKAILSEKVAVLQVSWGEYSEELVLEAH---------SAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAA------- 140 (300)
Q Consensus 78 ~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~---------~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaa------- 140 (300)
+.++.+.+.|.+.|.+++++. .++.++- +.|..+... .-.+.++..|++++ +.||..=
T Consensus 148 ~aA~~a~~aGfDgVeih~~~g--yLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v---~~pv~vris~~~~~ 222 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHG--YLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW---DGPLFVRVSASDYT 222 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTT--SHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC---CSCEEEEEECCCCS
T ss_pred HHHHHHHHcCCCEEEeccccc--hHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc---CCcEEEEecCcccC
Confidence 345666788999999987652 2333321 123221000 11345666777766 5676542
Q ss_pred -cCCCC--hHHHHHHH-HCCCcEEEecccc
Q 022271 141 -GGIVD--ARGYVAAL-SLGAQGICLGTRF 166 (300)
Q Consensus 141 -GGI~~--g~~v~aal-~lGAdgV~~GT~f 166 (300)
||+.. ...+++.+ ..|+|.+-+..+.
T Consensus 223 ~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 223 DKGLDIADHIGFAKWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 34432 22344444 4899999986553
No 229
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=84.27 E-value=21 Score=31.45 Aligned_cols=159 Identities=12% Similarity=0.057 Sum_probs=88.5
Q ss_pred cCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 7 LGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 7 lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
-|+ +|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-...
T Consensus 9 ~Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 87 (297)
T 3flu_A 9 QGS-LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANN 87 (297)
T ss_dssp CEE-EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred Cee-EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcC
Confidence 344 4444457741 1222 35666667788777775532 357788778888777654 357766654332
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEeec----------------------------
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVPQ---------------------------- 116 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~~---------------------------- 116 (300)
.. .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..++.++.-
T Consensus 88 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 167 (297)
T 3flu_A 88 TVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVK 167 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEE
Confidence 21 3455666677777765431 1121 22222221 234444321
Q ss_pred --cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 --DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 --~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++++... .+..| ..| +...+..++.+|++|++-++..++.++
T Consensus 168 dssgd~~~~~~~~~~~~-~~f~v-~~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 219 (297)
T 3flu_A 168 EASGNIGSNIELINRAP-EGFVV-LSG---DDHTALPFMLCGGHGVITVAANAAPKL 219 (297)
T ss_dssp ECSCCHHHHHHHHHHSC-TTCEE-EEC---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred eCCCCHHHHHHHHHhcC-CCeEE-EEC---cHHHHHHHHhCCCCEEEechHhhhHHH
Confidence 123444555555542 14444 444 345577899999999999999887654
No 230
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=84.16 E-value=23 Score=31.66 Aligned_cols=156 Identities=14% Similarity=0.035 Sum_probs=84.6
Q ss_pred cceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--
Q 022271 11 YGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH-- 76 (300)
Q Consensus 11 ~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~-- 76 (300)
+|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-.....
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~a 106 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEA 106 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHH
Confidence 3444457741 1222 35666667788778775542 357787777788776653 35765655433211
Q ss_pred HHHHHHHHHcCCcEEEEcC---CCC---------------------------------cHHHHHHHHH-CCCeEeec--c
Q 022271 77 NENIKAILSEKVAVLQVSW---GEY---------------------------------SEELVLEAHS-AGVKVVPQ--D 117 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~---G~~---------------------------------~~~~v~~~~~-~G~~v~~~--~ 117 (300)
.+..+.+.+.|++.+.+.. ..| +.+.+.++.+ ..-.+... .
T Consensus 107 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss 186 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDAT 186 (315)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCC
Confidence 2344555566666654321 111 2233333333 22112111 2
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
+.+.-+.++++... .+..|+ +| +...+..++.+|++|++-++..++.++
T Consensus 187 gd~~~~~~l~~~~~-~~f~v~-~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 235 (315)
T 3si9_A 187 GKIERASEQREKCG-KDFVQL-SG---DDCTALGFNAHGGVGCISVSSNVAPKL 235 (315)
T ss_dssp CCTHHHHHHHHHHC-SSSEEE-ES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred CCHHHHHHHHHHcC-CCeEEE-ec---CHHHHHHHHHcCCCEEEecHHHhhHHH
Confidence 33445555655542 144443 44 344577889999999999998887654
No 231
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=84.15 E-value=7.4 Score=36.46 Aligned_cols=111 Identities=13% Similarity=0.157 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhh-------cCCcEEeeeecCCCc----HHH---HHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeE
Q 022271 48 PDYLRDLIRKTRSL-------TERPFGVGVVLAFPH----NEN---IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKV 113 (300)
Q Consensus 48 ~~~l~~~i~~~r~~-------~~~P~gvnl~~~~~~----~~~---~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v 113 (300)
.+.+.+.+++.++. ...|+++|+..+... +++ ++.+.+. +++|.++.+||-.+ |...
T Consensus 159 ~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~--------Gl~~ 229 (415)
T 3i65_A 159 CDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTP--------GLRD 229 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------------
T ss_pred HHHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCC--------Cccc
Confidence 35555666554432 246899999876521 233 3333333 89999999997432 3332
Q ss_pred eec-cChhchHHHHHHhhC-----------------CCCCc-EEE--ccCCCC--hHHHHH-HHHCCCcEEEeccccc
Q 022271 114 VPQ-DGLISLLPMVVDLIG-----------------DRDIP-IIA--AGGIVD--ARGYVA-ALSLGAQGICLGTRFV 167 (300)
Q Consensus 114 ~~~-~~~~~ll~~v~~~~~-----------------~~~iP-Via--aGGI~~--g~~v~a-al~lGAdgV~~GT~fl 167 (300)
... ..+..++..|+++.+ ..++| |++ +-++.+ -.++++ +...|||||.+-.++.
T Consensus 230 lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 230 NQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred ccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 222 224456666666521 01577 543 445542 234444 4568999999876665
No 232
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=84.02 E-value=21 Score=31.09 Aligned_cols=170 Identities=20% Similarity=0.146 Sum_probs=91.0
Q ss_pred CCccceecCCCCCCCCcH----HHHHHHHhCCceEEecCCCCC---C--------HHHHHHHHHHHHhhcCCcEEeeeec
Q 022271 8 GFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAPDWE---A--------PDYLRDLIRKTRSLTERPFGVGVVL 72 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~~~~---~--------~~~l~~~i~~~r~~~~~P~gvnl~~ 72 (300)
|-+ |++-+++. -+-+. +++.++.++|.--+... .|. + .+.+ ++++++++..+.|+..-.+-
T Consensus 21 G~~-~~vIAgpc-~~~~~e~a~~~a~~l~~~Ga~~vk~~-~fkprts~~~~~g~~~egl-~~l~~~~~~~Gl~~~te~~d 96 (262)
T 1zco_A 21 GEG-FTIIAGPC-SIESREQIMKVAEFLAEVGIKVLRGG-AFKPRTSPYSFQGYGEKAL-RWMREAADEYGLVTVTEVMD 96 (262)
T ss_dssp TSS-CEEEEECS-BCCCHHHHHHHHHHHHHTTCCEEECB-SSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEEECCC
T ss_pred CCC-cEEEEeCC-CCCCHHHHHHHHHHHHHcCCCEEEEE-ecccCCCcccccCccHHHH-HHHHHHHHHcCCcEEEeeCC
Confidence 444 65555544 24443 77778888987544432 121 1 3333 34555555566777554442
Q ss_pred CC-------------------CcHHHHHHHHHcCCcEEEEcCCC-CcHHHHHH---HHHCC---CeEee----cc-----
Q 022271 73 AF-------------------PHNENIKAILSEKVAVLQVSWGE-YSEELVLE---AHSAG---VKVVP----QD----- 117 (300)
Q Consensus 73 ~~-------------------~~~~~~~~~~e~g~~~i~~~~G~-~~~~~v~~---~~~~G---~~v~~----~~----- 117 (300)
.. .+.+.++.+.+.+-+++...... .+.++... ++..| +.+++ ..
T Consensus 97 ~~~~~~l~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~ 176 (262)
T 1zco_A 97 TRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATR 176 (262)
T ss_dssp GGGHHHHHHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSS
T ss_pred HHhHHHHHhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcCh
Confidence 21 12345666666666766654221 23444433 34444 34444 11
Q ss_pred --ChhchHHHHHHhhCCCCCcEEEccCCCChH-----H-HHHHHHCCCcEEEeccccccC------cccCCCHHHHHHHH
Q 022271 118 --GLISLLPMVVDLIGDRDIPIIAAGGIVDAR-----G-YVAALSLGAQGICLGTRFVAS------EESYAHPEYKRKLV 183 (300)
Q Consensus 118 --~~~~ll~~v~~~~~~~~iPViaaGGI~~g~-----~-v~aal~lGAdgV~~GT~fl~t------~Es~~~~~~k~~i~ 183 (300)
-.+..++.+++.. ++||+..-.=++|. . ..++.++||+|+++=+.|-.. ..|-.++.+++.+.
T Consensus 177 ~~v~L~ai~~lk~~~---~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~ 253 (262)
T 1zco_A 177 FTLDISAVPVVKELS---HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLK 253 (262)
T ss_dssp SBCCTTHHHHHHHHB---SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHH
T ss_pred hhcCHHHHHHHHhhh---CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHH
Confidence 1345778887775 68987644333332 2 456788999999998886422 22233455666554
Q ss_pred c
Q 022271 184 E 184 (300)
Q Consensus 184 ~ 184 (300)
+
T Consensus 254 ~ 254 (262)
T 1zco_A 254 E 254 (262)
T ss_dssp H
T ss_pred H
Confidence 3
No 233
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=84.01 E-value=0.82 Score=41.59 Aligned_cols=83 Identities=14% Similarity=0.202 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcH--HHHHHHHHCC--CeEeec---c----ChhchHHHHHHhhCCCCCcEEEccCCCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSE--ELVLEAHSAG--VKVVPQ---D----GLISLLPMVVDLIGDRDIPIIAAGGIVD 145 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~--~~v~~~~~~G--~~v~~~---~----~~~~ll~~v~~~~~~~~iPViaaGGI~~ 145 (300)
.+.++.+.+.+..+. ...|..++ +.++.+.+.| ..++.. . ..+..+..+++.. +.|++..|.|.+
T Consensus 84 ~~~i~~~~~~g~~v~-v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~---~~~~vi~G~v~s 159 (336)
T 1ypf_A 84 ISFIRDMQSRGLIAS-ISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL---PESFVIAGNVGT 159 (336)
T ss_dssp HHHHHHHHHTTCCCE-EEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC---TTSEEEEEEECS
T ss_pred HHHHHHHHhcCCeEE-EeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC---CCCEEEECCcCC
Confidence 445565555665332 22454333 2334455677 555432 1 2345666777765 334555677999
Q ss_pred hHHHHHHHHCCCcEEEec
Q 022271 146 ARGYVAALSLGAQGICLG 163 (300)
Q Consensus 146 g~~v~aal~lGAdgV~~G 163 (300)
.+++.++..+|||+|.++
T Consensus 160 ~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 160 PEAVRELENAGADATKVG 177 (336)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999999994
No 234
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=83.99 E-value=11 Score=33.37 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=28.2
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH-CCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS-LGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~-lGAdgV~~ 162 (300)
+.+|.++.+..++ +++|++.|||. ..-+...+. .|++.+=+
T Consensus 196 l~~Lk~Lv~~a~~-rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~ 237 (287)
T 3iwp_A 196 LPLIKRLIEQAKG-RIVVMPGGGIT-DRNLQRILEGSGATEFHC 237 (287)
T ss_dssp HHHHHHHHHHHTT-SSEEEECTTCC-TTTHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHhCC-CCEEEECCCcC-HHHHHHHHHhhCCCEEeE
Confidence 4556666665432 69999999995 446666665 88887765
No 235
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=83.59 E-value=24 Score=31.49 Aligned_cols=159 Identities=15% Similarity=0.107 Sum_probs=86.3
Q ss_pred cCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 7 LGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 7 lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
-|+ +|.+.-||.- .+.. .+++.-..++|.=|++.++. .++.++-++.++.+.+.. +.|+-++.-...
T Consensus 26 ~Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~ 104 (315)
T 3na8_A 26 HGI-IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLT 104 (315)
T ss_dssp CEE-EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred Cce-EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 344 4445557741 1222 36666667788778776542 357788778888777653 356656544322
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---CCC---------------------------------cHHHHHHH-HHCCCeEee
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---GEY---------------------------------SEELVLEA-HSAGVKVVP 115 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G~~---------------------------------~~~~v~~~-~~~G~~v~~ 115 (300)
.. .+..+.+.+.|++.+.+.. ..| +.+.+.++ .+..-.+..
T Consensus 105 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgi 184 (315)
T 3na8_A 105 TAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMV 184 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEE
Confidence 11 2344555566666665421 011 22344444 332222211
Q ss_pred c--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 116 Q--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 116 ~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
. .+.+..+.++.+...+ +..|+. |. ...+..++.+|++|++-|+..++.++
T Consensus 185 Kdssgd~~~~~~~~~~~~~-~f~v~~-G~---D~~~l~~l~~G~~G~is~~an~~P~~ 237 (315)
T 3na8_A 185 KESTGDIQRMHKLRLLGEG-RVPFYN-GC---NPLALEAFVAGAKGWCSAAPNLIPTL 237 (315)
T ss_dssp EECSSCHHHHHHHHHHTTT-CSCEEE-CC---GGGHHHHHHHTCSEEEESGGGTCHHH
T ss_pred ECCCCCHHHHHHHHHHcCC-CEEEEe-Cc---hHHHHHHHHCCCCEEEechhhhCHHH
Confidence 1 1234445555555431 455554 32 34567889999999999998877654
No 236
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=83.52 E-value=3.2 Score=34.72 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=51.5
Q ss_pred HHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhCC----CCCcEEEccCCCChHHHHHH
Q 022271 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIGD----RDIPIIAAGGIVDARGYVAA 152 (300)
Q Consensus 81 ~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~~----~~iPViaaGGI~~g~~v~aa 152 (300)
..+...|.+++.+....|++++++.+++.+..++.. ...+..++++.+.+++ .++||+..|...+.+ .+
T Consensus 110 ~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~-~~-- 186 (210)
T 1y80_A 110 MMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQD-FA-- 186 (210)
T ss_dssp HHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHH-HH--
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHH-HH--
Confidence 344467999999887788889999888777666653 2233445555544421 249999999988853 33
Q ss_pred HHCCCcEE
Q 022271 153 LSLGAQGI 160 (300)
Q Consensus 153 l~lGAdgV 160 (300)
-..|||+.
T Consensus 187 ~~~gad~~ 194 (210)
T 1y80_A 187 DEIGADGY 194 (210)
T ss_dssp HHHTCSEE
T ss_pred HHcCCeEE
Confidence 44699864
No 237
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=83.41 E-value=2.6 Score=38.79 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=48.1
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+.+++..++..| +|.|++....+..
T Consensus 209 ~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~---~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG 277 (384)
T 2pgw_A 209 MCRKLEKYDIEFIEQPTVSWSIPAMAHVREKV---GIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGG 277 (384)
T ss_dssp HHHHHGGGCCSEEECCSCTTCHHHHHHHHHHC---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCEEeCCCChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCC
Confidence 334444556655543 12456677788776 79999999999999999999976 8999997666554
No 238
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=83.26 E-value=8.1 Score=33.57 Aligned_cols=107 Identities=13% Similarity=0.275 Sum_probs=62.2
Q ss_pred HHHHHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHHH----HHCCCeEeeccC
Q 022271 51 LRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLEA----HSAGVKVVPQDG 118 (300)
Q Consensus 51 l~~~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~~----~~~G~~v~~~~~ 118 (300)
+.+..++.|+...+.+-.=++.-+|+ .+.++.+.+.|+|+|.+.. ..| ..++++.. .+.|+.+ ..
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~---~~ 80 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRF---ED 80 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCH---HH
T ss_pred HHHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCH---HH
Confidence 34445555544333332223333454 3467788889999998843 111 11344433 3566322 23
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCC-------hHHHHHHHHCCCcEEEec
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVD-------ARGYVAALSLGAQGICLG 163 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~-------g~~v~aal~lGAdgV~~G 163 (300)
.+.++.++++.+. ++|++.- +..+ .+.+..+...|+||+.+.
T Consensus 81 ~~~~v~~ir~~~~--~~Pi~~m-~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 81 VLELSETLRKEFP--DIPFLLM-TYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHHCT--TSCEEEE-CCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHHHHhhcC--CCCEEEE-ecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 5677888877642 5899885 3333 355667888999999985
No 239
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=83.23 E-value=5.4 Score=29.30 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=47.6
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++.++++.-...++|||+-.+-.+......++..
T Consensus 35 ~~~al~~l~~~~~dlvllD~~~p~-----------------~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~ 97 (122)
T 3gl9_A 35 GQIALEKLSEFTPDLIVLXIMMPV-----------------MDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSL 97 (122)
T ss_dssp HHHHHHHHTTBCCSEEEECSCCSS-----------------SCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEEEeccCCC-----------------CcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhc
Confidence 355566666666777777655431 123456666654321136999999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 98 Ga~~~l~ 104 (122)
T 3gl9_A 98 GARKVMR 104 (122)
T ss_dssp TCSEEEE
T ss_pred Chhhhcc
Confidence 9998654
No 240
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.18 E-value=17 Score=29.80 Aligned_cols=121 Identities=13% Similarity=0.148 Sum_probs=67.0
Q ss_pred HHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHHHHHHc-CCc-EEEEcCCCCcHHHHHHHH
Q 022271 31 VANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIKAILSE-KVA-VLQVSWGEYSEELVLEAH 107 (300)
Q Consensus 31 vs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~~~~e~-g~~-~i~~~~G~~~~~~v~~~~ 107 (300)
+.+.+.+.++.. .+++...+.++.+.+..-.-+-+++- .+. .+.++.+.+. +.+ .|..+.- ...+.++.+.
T Consensus 7 ~~~~~~i~~~~~---~~~~~~~~~~~~~~~~G~~~iev~~~--~~~~~~~i~~ir~~~~~~~~ig~~~v-~~~~~~~~a~ 80 (205)
T 1wa3_A 7 FKKHKIVAVLRA---NSVEEAKEKALAVFEGGVHLIEITFT--VPDADTVIKELSFLKEKGAIIGAGTV-TSVEQCRKAV 80 (205)
T ss_dssp HHHHCEEEEECC---SSHHHHHHHHHHHHHTTCCEEEEETT--STTHHHHHHHTHHHHHTTCEEEEESC-CSHHHHHHHH
T ss_pred HhhCCEEEEEec---CCHHHHHHHHHHHHHCCCCEEEEeCC--ChhHHHHHHHHHHHCCCCcEEEeccc-CCHHHHHHHH
Confidence 455566777653 47787777777776532111222222 222 2334544443 212 2333211 1233456666
Q ss_pred HCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 108 SAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 108 ~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.|+..+.. +.+. +++.+..+..++|++. |+.|+.++..++.+|+|.|-+
T Consensus 81 ~~Gad~iv~-~~~~--~~~~~~~~~~g~~vi~--g~~t~~e~~~a~~~Gad~vk~ 130 (205)
T 1wa3_A 81 ESGAEFIVS-PHLD--EEISQFCKEKGVFYMP--GVMTPTELVKAMKLGHTILKL 130 (205)
T ss_dssp HHTCSEEEC-SSCC--HHHHHHHHHHTCEEEC--EECSHHHHHHHHHTTCCEEEE
T ss_pred HcCCCEEEc-CCCC--HHHHHHHHHcCCcEEC--CcCCHHHHHHHHHcCCCEEEE
Confidence 778777732 2222 2222222112799987 788999999999999999875
No 241
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=83.12 E-value=24 Score=31.19 Aligned_cols=59 Identities=15% Similarity=0.226 Sum_probs=45.7
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHH-HHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARG-YVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE 184 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~ 184 (300)
.+.+|.++.+.+ ++|++.=||=+.+.+ +.+++.+|..-|-++|-+... .....|+.+.+
T Consensus 190 d~~~L~~I~~~~---~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a----~~~~~r~~~~~ 249 (286)
T 1gvf_A 190 DFQRLAEIREVV---DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIA----FAGAVKAWFAE 249 (286)
T ss_dssp CHHHHHHHHHHC---CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHH----HHHHHHHHHHH
T ss_pred CHHHHHHHHHhc---CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHHHH----HHHHHHHHHHh
Confidence 356888998887 799999998876654 889999999999999987655 23455555543
No 242
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=83.12 E-value=5 Score=35.97 Aligned_cols=44 Identities=23% Similarity=0.447 Sum_probs=32.3
Q ss_pred hHHHHHHhhCCCCCcEEEccCCC--ChHH----HHHHHH-CCCcEEEecccccc
Q 022271 122 LLPMVVDLIGDRDIPIIAAGGIV--DARG----YVAALS-LGAQGICLGTRFVA 168 (300)
Q Consensus 122 ll~~v~~~~~~~~iPViaaGGI~--~g~~----v~aal~-lGAdgV~~GT~fl~ 168 (300)
-+.+|.+.. .+||+.+||=. |.++ +..++. .||.|+.+|.-.+-
T Consensus 228 ~f~~Vv~a~---~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 228 EMERVMEST---TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp THHHHGGGC---SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred HHHHHHHhC---CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 346666655 79999999977 4444 446677 69999999987776
No 243
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=83.10 E-value=11 Score=34.70 Aligned_cols=117 Identities=9% Similarity=0.010 Sum_probs=73.4
Q ss_pred CCHHHHHHHH-HHHHhhcCCcEEeeeecCC-------C---cHHHHHHHHHc-CCc--EE-EEcCCCCcH---HHHHHHH
Q 022271 46 EAPDYLRDLI-RKTRSLTERPFGVGVVLAF-------P---HNENIKAILSE-KVA--VL-QVSWGEYSE---ELVLEAH 107 (300)
Q Consensus 46 ~~~~~l~~~i-~~~r~~~~~P~gvnl~~~~-------~---~~~~~~~~~e~-g~~--~i-~~~~G~~~~---~~v~~~~ 107 (300)
.+++++.+.+ ++..+..=+ .+++-... . +.+.++.+.+. +++ +. ..+.+-.+. .+.+.+.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~--~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~ 215 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPA--AVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALE 215 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCS--EEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCC--EEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 5788887777 666553212 23332221 1 13345555553 443 32 233332223 3456677
Q ss_pred HCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 108 SAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 108 ~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
+.|+..+.+. ..+..+.++++.+ ++||.+...+.+..++..++..|+|.|++--..+
T Consensus 216 ~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~d~v~~k~~~~ 275 (393)
T 4dwd_A 216 DLGYSWFEEPVQHYHVGAMGEVAQRL---DITVSAGEQTYTLQALKDLILSGVRMVQPDIVKM 275 (393)
T ss_dssp HTTCSEEECCSCTTCHHHHHHHHHHC---SSEEEBCTTCCSHHHHHHHHHHTCCEECCCTTTT
T ss_pred hhCCCEEECCCCcccHHHHHHHHhhC---CCCEEecCCcCCHHHHHHHHHcCCCEEEeCcccc
Confidence 7888887651 2456677788776 7999999999999999999998899999865443
No 244
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=83.08 E-value=14 Score=34.18 Aligned_cols=117 Identities=12% Similarity=-0.008 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHc-CCc--EE-EEcCCCCc--HHHHHHHHHCCCeEeecc---C
Q 022271 48 PDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSE-KVA--VL-QVSWGEYS--EELVLEAHSAGVKVVPQD---G 118 (300)
Q Consensus 48 ~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~-g~~--~i-~~~~G~~~--~~~v~~~~~~G~~v~~~~---~ 118 (300)
++++.+..++..+..=+-|=+++ ....+.+.++.+.+. |++ +. ..+.+-.+ ..+++.+.+.|+..+.+. .
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv-~~~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iEqP~~~~ 242 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI-KPGWDVEPLQETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHEQPLHYE 242 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC-BTTBSHHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEESCSCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe-CcchHHHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEeCCCChh
Confidence 88888888777654222233444 222345666666653 343 32 23322222 345556667888877651 2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++--..+.
T Consensus 243 d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 290 (400)
T 3mwc_A 243 ALLDLKELGERI---ETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVG 290 (400)
T ss_dssp CHHHHHHHHHHS---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred hHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhC
Confidence 356677788776 79999999999999999999986 689988654443
No 245
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=83.04 E-value=1.6 Score=42.32 Aligned_cols=55 Identities=15% Similarity=0.354 Sum_probs=48.3
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHh
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRS 60 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~ 60 (300)
|++-+.++.||+.+||. .++.++||.++++.||+|+|+. | +++++-.++++++|+
T Consensus 85 lt~~i~L~iPlvSA~MD-TVTe~~MAIamAr~GGiGvIH~-n-~sie~Qa~~V~~VKr 139 (556)
T 4af0_A 85 ATKNIVLNTPFLSSPMD-TVTEDRMAIALALHGGLGIIHH-N-CSAEEQAAMVRRVKK 139 (556)
T ss_dssp EETTEEESSCEEECCCT-TTCSHHHHHHHHHTTCEEEECC-S-SCHHHHHHHHHHHHH
T ss_pred ccCCcEeCCCEEecCcc-cccCHHHHHHHHHCCCeEEEcC-C-CCHHHHHHHHHHHHh
Confidence 34556678899999999 8999999999999999999997 4 699988889998875
No 246
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=82.79 E-value=2 Score=36.41 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=52.1
Q ss_pred HHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec------cChhchHHHHHHhhCC--C--CCcEEEccCCCChHHHH
Q 022271 81 KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ------DGLISLLPMVVDLIGD--R--DIPIIAAGGIVDARGYV 150 (300)
Q Consensus 81 ~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~------~~~~~ll~~v~~~~~~--~--~iPViaaGGI~~g~~v~ 150 (300)
..+...|.+++.+....|++++++.+++.+..++.. ..++..++++.+.+++ . ++||+..|...+. +.+
T Consensus 114 ~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~-~~a 192 (215)
T 3ezx_A 114 TMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSD-KWI 192 (215)
T ss_dssp HHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCH-HHH
T ss_pred HHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCH-HHH
Confidence 344467999999887788899999998877665543 1233445555555432 2 6899999999885 444
Q ss_pred HHHHCCCcEE
Q 022271 151 AALSLGAQGI 160 (300)
Q Consensus 151 aal~lGAdgV 160 (300)
. ..|||+.
T Consensus 193 ~--~iGad~~ 200 (215)
T 3ezx_A 193 E--EIGADAT 200 (215)
T ss_dssp H--HHTCCBC
T ss_pred H--HhCCeEE
Confidence 3 4588853
No 247
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.66 E-value=3.9 Score=36.43 Aligned_cols=124 Identities=13% Similarity=0.129 Sum_probs=66.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC-CCChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG-I~~g~~v~---aa 152 (300)
..+++.+++.|++.+.+. |... +... +...--..++..+++.+++ ++|||+.=| .++.+.+. .+
T Consensus 28 ~~lv~~li~~Gv~gl~v~-GttG-E~~~---------Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 95 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPL-GSTG-EFAY---------LGTAQREAVVRATIEAAQR-RVPVVAGVASTSVADAVAQAKLY 95 (300)
T ss_dssp HHHHHHHHHTTCSCBBTT-SGGG-TGGG---------CCHHHHHHHHHHHHHHHTT-SSCBEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-Cccc---------cCHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 456777777788777554 3210 0000 0000012455556666543 689887544 34444333 44
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhhc
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 217 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 217 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+++.++.+
T Consensus 96 ~~~Gadavlv~~P~y~~~~~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 96 EKLGADGILAILEAYFPLKDAQIES-YFRAIADAVEIP-VVIYT---NPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp HHHTCSEEEEEECCSSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CTTTCSSCCCHHHHHHHHT
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHH-HHHHHHHHCCCC-EEEEE---CccccCCCCCHHHHHHHHc
Confidence 568999999999998752 111222 334444444433 23454 3666666777777766643
No 248
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=82.37 E-value=2.4 Score=41.94 Aligned_cols=76 Identities=17% Similarity=0.059 Sum_probs=53.2
Q ss_pred HHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cC---hhchHHHHHHhhCC----CCCcEEEccCCCChHHHHH
Q 022271 83 ILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DG---LISLLPMVVDLIGD----RDIPIIAAGGIVDARGYVA 151 (300)
Q Consensus 83 ~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~---~~~ll~~v~~~~~~----~~iPViaaGGI~~g~~v~a 151 (300)
+...|-+++.+....|++++++.+++.+..++.. .. .+..++++.+.+++ .++||++.|.+.+. +.+
T Consensus 630 LE~aGFEVIDLGvdVPpEeIVeAA~EedADVVGLSsLLTt~dihL~~MkevIelLrE~GlrDkIkVIVGGa~~tq-d~A- 707 (763)
T 3kp1_A 630 IEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTP-EVA- 707 (763)
T ss_dssp GGGGTCEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHTTCTTTSEEEEECTTCCH-HHH-
T ss_pred HHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCchhhHHHHHHHHHHHHhcCCCCCCEEEEECCCCCH-HHH-
Confidence 3456788887776677888888888888877764 12 35666777776532 24899998888875 433
Q ss_pred HHHCCCcEEE
Q 022271 152 ALSLGAQGIC 161 (300)
Q Consensus 152 al~lGAdgV~ 161 (300)
-.+|||++.
T Consensus 708 -keIGADa~f 716 (763)
T 3kp1_A 708 -VKQGVDAGF 716 (763)
T ss_dssp -HTTTCSEEE
T ss_pred -HHcCCcEEE
Confidence 378999873
No 249
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=82.31 E-value=12 Score=33.23 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCC--Cc---HHHHHHHHHCCC---eEeec---------cChhchHHHHHHhhCCCCCcEEE
Q 022271 77 NENIKAILSEKVAVLQVSWGE--YS---EELVLEAHSAGV---KVVPQ---------DGLISLLPMVVDLIGDRDIPIIA 139 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~--~~---~~~v~~~~~~G~---~v~~~---------~~~~~ll~~v~~~~~~~~iPVia 139 (300)
.+.++.+...+-+++... |. .+ ...++.+.+.|- .+.+. .-.+..+|.+++... ++||+.
T Consensus 124 ~~LLr~va~~gkPVilK~-G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~--~~pV~~ 200 (285)
T 3sz8_A 124 TDLVVAIAKAGKPVNVKK-PQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTG--GCPVIF 200 (285)
T ss_dssp HHHHHHHHHTSSCEEEEC-CTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTT--SCCEEE
T ss_pred HHHHHHHHccCCcEEEeC-CCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCC--CCCEEE
Confidence 445666666666766554 32 12 345556666653 22221 124667888888751 389988
Q ss_pred c-----------cCCCCh------HHHHHHHHCCCcEEEeccccc
Q 022271 140 A-----------GGIVDA------RGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 140 a-----------GGI~~g------~~v~aal~lGAdgV~~GT~fl 167 (300)
. ||.+.| .-..+|.++||||+++=+.|-
T Consensus 201 D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 201 DVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPD 245 (285)
T ss_dssp ETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESC
T ss_pred eCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccC
Confidence 3 333344 234588899999999966654
No 250
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.17 E-value=26 Score=30.94 Aligned_cols=160 Identities=14% Similarity=0.142 Sum_probs=84.6
Q ss_pred ccCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecC
Q 022271 6 MLGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLA 73 (300)
Q Consensus 6 ~lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~ 73 (300)
+-|+ +|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..
T Consensus 5 ~~Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 83 (300)
T 3eb2_A 5 FHGV-FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST 83 (300)
T ss_dssp CCEE-EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEES
T ss_pred CCee-EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 3455 4444457741 1222 35666667788777765532 367888878888777653 35766665443
Q ss_pred CCc--HHHHHHHHHcCCcEEEEcC---CCC---------------------------------cHHHHHHHHHCCCeEee
Q 022271 74 FPH--NENIKAILSEKVAVLQVSW---GEY---------------------------------SEELVLEAHSAGVKVVP 115 (300)
Q Consensus 74 ~~~--~~~~~~~~e~g~~~i~~~~---G~~---------------------------------~~~~v~~~~~~G~~v~~ 115 (300)
... .+..+.+.+.|++.+.+.. ..| +.+.+.++.+..-.+..
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 163 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYI 163 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEE
Confidence 221 2344555566666654321 111 12333333222111111
Q ss_pred c--cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 116 Q--DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 116 ~--~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
. .+.+..+.++++...+ +..|+. |. ...+..++.+|++|++-|+..++.++
T Consensus 164 Kdssgd~~~~~~~~~~~~~-~f~v~~-G~---d~~~~~~l~~G~~G~is~~an~~P~~ 216 (300)
T 3eb2_A 164 KDASTNTGRLLSIINRCGD-ALQVFS-AS---AHIPAAVMLIGGVGWMAGPACIAPRQ 216 (300)
T ss_dssp EECSSBHHHHHHHHHHHGG-GSEEEE-CT---TSCHHHHHHTTCCEEEEGGGGTCHHH
T ss_pred EcCCCCHHHHHHHHHHcCC-CeEEEe-Cc---HHHHHHHHhCCCCEEEeChhhhhHHH
Confidence 1 1234445555554421 344443 32 23467889999999999998877654
No 251
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=82.15 E-value=5.7 Score=34.64 Aligned_cols=106 Identities=17% Similarity=0.211 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHH----HHHCCCeEeeccC
Q 022271 51 LRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLE----AHSAGVKVVPQDG 118 (300)
Q Consensus 51 l~~~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~----~~~~G~~v~~~~~ 118 (300)
+.+..++.|+...+.+..=++..+|+ .+.++.+.+.|+++|.+.. ..| ..++++. ..+.|+.+ ..
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~---~~ 80 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTP---AQ 80 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCH---HH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCH---HH
Confidence 44445555544344443344444553 3467788889999998753 222 1123432 33456321 12
Q ss_pred hhchHHHHHHh-hCCCCCcEEEccCCCC-------hHHHHHHHHCCCcEEEec
Q 022271 119 LISLLPMVVDL-IGDRDIPIIAAGGIVD-------ARGYVAALSLGAQGICLG 163 (300)
Q Consensus 119 ~~~ll~~v~~~-~~~~~iPViaaGGI~~-------g~~v~aal~lGAdgV~~G 163 (300)
.+.++.++++. + ++||+.-+ ..+ .+.+..+...||||+.+-
T Consensus 81 ~~~~v~~ir~~~~---~~Pv~lm~-y~n~v~~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 81 CFEMLAIIREKHP---TIPIGLLM-YANLVFNNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp HHHHHHHHHHHCS---SSCEEEEE-CHHHHHTTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHhcCC---CCCEEEEE-cccHHHHhhHHHHHHHHHHcCCCEEEEc
Confidence 45677788777 5 78988742 122 356777888999999985
No 252
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=81.84 E-value=30 Score=31.59 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCC-C---cHHHHHHHHHc-CCcE-E--EEcCCCCcH---HHHHHHHHCCCeEe
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAF-P---HNENIKAILSE-KVAV-L--QVSWGEYSE---ELVLEAHSAGVKVV 114 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~-~---~~~~~~~~~e~-g~~~-i--~~~~G~~~~---~~v~~~~~~G~~v~ 114 (300)
.+++++.++.++..+..+ --.+++-... . +.+.++.+.+. +.++ + ..+.+-.+. .+.+.+.+.|+..+
T Consensus 147 ~~~~~~~~~a~~~~~~~G-~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 225 (383)
T 3i4k_A 147 LPLDVAVAEIEERIEEFG-NRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELF 225 (383)
T ss_dssp CCHHHHHHHHHHHHHHHC-CSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHhcC-CcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 467777666665543311 1233433222 1 13445555554 4432 2 233232222 34566777888887
Q ss_pred ecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 115 PQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 115 ~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 226 EqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~G 280 (383)
T 3i4k_A 226 EQPTPADDLETLREITRRT---NVSVMADESVWTPAEALAVVKAQAADVIALKTTKHG 280 (383)
T ss_dssp ESCSCTTCHHHHHHHHHHH---CCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTT
T ss_pred ECCCChhhHHHHHHHHhhC---CCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccC
Confidence 651 2355677888877 79999999999999999999976 789999754443
No 253
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=81.83 E-value=29 Score=31.20 Aligned_cols=141 Identities=12% Similarity=0.004 Sum_probs=76.1
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-...+|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5565566778777765432 367888888888877654 35766665443221 2345555666777665421
Q ss_pred --CCCc-HHHHHHH----HHCCCeEeec------------------------------cCh----hchHHHHHHhhCCCC
Q 022271 96 --GEYS-EELVLEA----HSAGVKVVPQ------------------------------DGL----ISLLPMVVDLIGDRD 134 (300)
Q Consensus 96 --G~~~-~~~v~~~----~~~G~~v~~~------------------------------~~~----~~ll~~v~~~~~~~~ 134 (300)
..|+ +.+++.. ...++.++.- .+. +..+.++++... .+
T Consensus 139 ~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdssgd~~~~~~~~~~l~~~~~-~~ 217 (332)
T 2r8w_A 139 SYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLPADADYAGELARLRPKLS-DD 217 (332)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECCCTTCCHHHHHHHHTTTSC-TT
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCCCCchhHHHHHHHHHHhcC-CC
Confidence 1111 2222221 1233333311 122 333334433321 12
Q ss_pred CcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 135 IPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 135 iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.. +..| +...+..++.+|++|++-|+..+++++
T Consensus 218 f~-v~~G---~D~~~l~~l~~G~~G~is~~anv~P~~ 250 (332)
T 2r8w_A 218 FA-IGYS---GDWGCTDATLAGGDTWYSVVAGLLPVP 250 (332)
T ss_dssp CE-EEEC---CHHHHHHHHHTTCSEEEESGGGTCHHH
T ss_pred EE-EEeC---chHHHHHHHHCCCCEEEeCHHHhCHHH
Confidence 33 3444 345678889999999999999887654
No 254
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=81.80 E-value=22 Score=29.82 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=77.0
Q ss_pred HHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHHHHHHcCCcEEEEcCCC-CcHHHHH
Q 022271 27 LVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIKAILSEKVAVLQVSWGE-YSEELVL 104 (300)
Q Consensus 27 la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~G~-~~~~~v~ 104 (300)
+...+.+.+-+.++-. .+++++.+.++++-+.. -. .+.+....+. .+.++.+.+.-++.+. ..|. ...+-++
T Consensus 9 ~~~~l~~~~~i~v~r~---~~~~~~~~~~~al~~gG-v~-~iel~~k~~~~~~~i~~l~~~~~~~~v-gagtvi~~d~~~ 82 (214)
T 1wbh_A 9 AESILTTGPVVPVIVV---KKLEHAVPMAKALVAGG-VR-VLNVTLRTECAVDAIRAIAKEVPEAIV-GAGTVLNPQQLA 82 (214)
T ss_dssp HHHHHHSCSEEEEECC---SSGGGHHHHHHHHHHTT-CC-EEEEESCSTTHHHHHHHHHHHCTTSEE-EEESCCSHHHHH
T ss_pred HHHHHHHCCEEEEEEC---CCHHHHHHHHHHHHHcC-CC-EEEEeCCChhHHHHHHHHHHHCcCCEE-eeCEEEEHHHHH
Confidence 4455667777777753 35665555555554321 11 2333332222 4455544333233222 1122 2345566
Q ss_pred HHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHc
Q 022271 105 EAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE 184 (300)
Q Consensus 105 ~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~ 184 (300)
.+.++|...++..++-.-+.+.+... ++|++. |+.|..++.+++.+|||.|.+ |- .+......+-+.+..
T Consensus 83 ~A~~aGAd~v~~p~~d~~v~~~~~~~---g~~~i~--G~~t~~e~~~A~~~Gad~v~~---Fp--a~~~gG~~~lk~i~~ 152 (214)
T 1wbh_A 83 EVTEAGAQFAISPGLTEPLLKAATEG---TIPLIP--GISTVSELMLGMDYGLKEFKF---FP--AEANGGVKALQAIAG 152 (214)
T ss_dssp HHHHHTCSCEEESSCCHHHHHHHHHS---SSCEEE--EESSHHHHHHHHHTTCCEEEE---TT--TTTTTHHHHHHHHHT
T ss_pred HHHHcCCCEEEcCCCCHHHHHHHHHh---CCCEEE--ecCCHHHHHHHHHCCCCEEEE---ec--CccccCHHHHHHHhh
Confidence 66667766665433222222333333 688877 499999999999999999998 43 233223455556665
Q ss_pred CC
Q 022271 185 MD 186 (300)
Q Consensus 185 a~ 186 (300)
.-
T Consensus 153 ~~ 154 (214)
T 1wbh_A 153 PF 154 (214)
T ss_dssp TC
T ss_pred hC
Confidence 43
No 255
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=81.61 E-value=2.8 Score=35.18 Aligned_cols=63 Identities=13% Similarity=0.231 Sum_probs=43.2
Q ss_pred HHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEE-------ccCC---CChHHHHHHHHCCCcEEEeccccc
Q 022271 101 ELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIA-------AGGI---VDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPVia-------aGGI---~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
++++.+.++|+..++. .....+.++++.+ ++|++. .+++ .+.+++..++..|||.|.+++...
T Consensus 27 ~~a~~~~~~Ga~~i~~-~~~~~i~~i~~~~---~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~ 99 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRA-NTKEDILAIKETV---DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ 99 (223)
T ss_dssp HHHHHHHHHTCSEEEE-ESHHHHHHHHHHC---CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS
T ss_pred HHHHHHHHCCCeeecc-CCHHHHHHHHHhc---CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc
Confidence 4455555666666553 2345566777766 788863 4556 456788899999999999998654
No 256
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=81.26 E-value=2.3 Score=40.59 Aligned_cols=56 Identities=18% Similarity=0.367 Sum_probs=48.3
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL 61 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~ 61 (300)
|++.+++.+|+++++|. .+++.+|+.++++.|++|++.. + .++++.++.+++++..
T Consensus 42 Lt~~~~l~iP~is~~m~-~v~~~~lA~al~~~GglG~i~~-~-~~~e~~~~~v~~v~~~ 97 (494)
T 1vrd_A 42 LTRQIRINIPLVSAAMD-TVTEAALAKALAREGGIGIIHK-N-LTPDEQARQVSIVKKT 97 (494)
T ss_dssp SSSSCEESSSEEECCCT-TTCSHHHHHHHHTTTCEEEECS-S-SCHHHHHHHHHHHHTC
T ss_pred hhCCCccCceeEecchH-HHhHHHHHHHHHHcCCceEEec-C-CChHHHHHHHHhhhhH
Confidence 46778899999999998 7999999999999999999975 3 6888888888777654
No 257
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=81.04 E-value=5 Score=35.65 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=65.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH-HH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG-YV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v~---aa 152 (300)
..+++.+++.|++.+... |...+ .... ...--..++..+++.+++ ++|||+.=|=.+-++ +. .+
T Consensus 31 ~~lv~~li~~Gv~gl~~~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 98 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAV-GTTGE-SATL---------SVEEHTAVIEAVVKHVAK-RVPVIAGTGANNTVEAIALSQAA 98 (297)
T ss_dssp HHHHHHHHHTTCCEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-ccccC-cccC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 467788888899988765 33110 0000 000012455556666643 699988655434444 32 44
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 99 ~~~Gadavlv~~P~y~~~~~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 99 EKAGADYTLSVVPYYNKPSQEGIYQ-HFKTIAEATSIP-MIIYN---VPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHCCSC-EEEEE---CHHHHSSCCCHHHHHHHT
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHhCCCC-EEEEE---CCchhccCCCHHHHHHHH
Confidence 569999999999998743 111222 333444444433 23443 244434455555555543
No 258
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=81.02 E-value=5.2 Score=35.72 Aligned_cols=124 Identities=18% Similarity=0.231 Sum_probs=65.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+.+. |...+ .... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 39 ~~lv~~li~~Gv~gi~v~-GttGE-~~~L---------t~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 106 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVS-GTTGE-SPTT---------TDGEKIELLRAVLEAVGD-RARVIAGAGTYDTAHSIRLAKAC 106 (304)
T ss_dssp HHHHHHHHHTTCSEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-ccccc-hhhC---------CHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHHH
Confidence 567888889999988775 33110 0000 000012455556666543 68999865544444433 44
Q ss_pred HHCCCcEEEeccccccCcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||+|++-++|....--..--.|=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 107 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 107 AAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELP-MLLYD---IPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSC-EEEEE---CHHHHSSCCCHHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCC-EEEEe---CccccCCCCCHHHHHHHh
Confidence 4589999999999987531111112233444444433 23443 244334455555555544
No 259
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=80.76 E-value=1.9 Score=41.36 Aligned_cols=55 Identities=16% Similarity=0.495 Sum_probs=47.3
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHh
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRS 60 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~ 60 (300)
+++.+++.+|+|++||. .++..+|+.++++.|++|++.. + .+++++.+.+++++.
T Consensus 55 Lt~~~~~~iP~vsa~md-~~t~~~la~~ia~~gg~gii~~-~-~t~e~~~~~v~~v~~ 109 (514)
T 1jcn_A 55 LTRKITLKTPLISSPMD-TVTEADMAIAMALMGGIGFIHH-N-CTPEFQANEVRKVKN 109 (514)
T ss_dssp SSSSCEESSCEEECCCT-TTCSHHHHHHHHHTTCEEEECC-S-SCHHHHHHHHHHHHT
T ss_pred ccCCeeEeceEEEEehh-hhhhhhHHHHHHhcCCeeEEec-C-CCHHHHHHHHHhhhh
Confidence 45678889999999998 7999999999999999999975 2 589988888877764
No 260
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=80.65 E-value=11 Score=33.98 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=47.5
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+.+++..++..| +|.|++....+.
T Consensus 208 ~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~G 275 (359)
T 1mdl_A 208 RSQALQQEGVTWIEEPTLQHDYEGHQRIQSKL---NVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIG 275 (359)
T ss_dssp HHHHHHHHTCSCEECCSCTTCHHHHHHHHHTC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTT
T ss_pred HHHHHHHhCCCeEECCCChhhHHHHHHHHHhC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhC
Confidence 4445556677666541 2455667777766 79999999999999999999986 799999755544
No 261
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=80.33 E-value=30 Score=30.39 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=76.0
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 5666666778777775532 367777777777776653 35665554432211 2334445555666554321
Q ss_pred ----------------------------------CC-CcHHHHHHHHH-CCCeEeec--cChhchHHHHHHhhCCCCCcE
Q 022271 96 ----------------------------------GE-YSEELVLEAHS-AGVKVVPQ--DGLISLLPMVVDLIGDRDIPI 137 (300)
Q Consensus 96 ----------------------------------G~-~~~~~v~~~~~-~G~~v~~~--~~~~~ll~~v~~~~~~~~iPV 137 (300)
|. .+.+.+.++.+ ..-.+... .+.+..+.++++... .+..|
T Consensus 105 ~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~gd~~~~~~~~~~~~-~~f~v 183 (292)
T 2vc6_A 105 YYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPSLERMACG-EDFNL 183 (292)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHHSC-TTSEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCCCCHHHHHHHHHHcC-CCEEE
Confidence 11 12233333322 21111111 123344455555432 14555
Q ss_pred EEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 138 IAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 138 iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
+ .| +...+..++.+|++|++-|+..++.++
T Consensus 184 ~-~G---~d~~~~~~l~~G~~G~is~~~n~~P~~ 213 (292)
T 2vc6_A 184 L-TG---EDGTALGYMAHGGHGCISVTANVAPAL 213 (292)
T ss_dssp E-ES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred E-EC---chHHHHHHHHcCCCEEEecHHHhCHHH
Confidence 4 44 345678899999999999999887654
No 262
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=80.23 E-value=3.4 Score=36.98 Aligned_cols=75 Identities=11% Similarity=-0.091 Sum_probs=53.0
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
+.+.++...+.|++.|++--.. |.+ +.. .|.... ...+..+.++++.+ ++||++-++|..-..+..+.++
T Consensus 30 ~~e~A~~ye~~GA~~lsvLe~~-~~D-i~~---~~g~~R--~~~~~~i~~i~~~v---~iPvl~k~~i~~ide~qil~aa 99 (297)
T 4adt_A 30 NVEQAKIAEKAGAIGVMILENI-PSE-LRN---TDGVAR--SVDPLKIEEIRKCI---SINVLAKVRIGHFVEAQILEEL 99 (297)
T ss_dssp SHHHHHHHHHHTCSEEEECCCC-C---------CCCCCC--CCCHHHHHHHHTTC---CSEEEEEEETTCHHHHHHHHHT
T ss_pred cHHHHHHHHHcCCCEEEEecCC-CCc-chh---cCCccc--CCCHHHHHHHHHhc---CCCEEEeccCCcHHHHHHHHHc
Confidence 4577888889999998765322 211 111 111000 23678889999887 8999999999888888888899
Q ss_pred CCcEE
Q 022271 156 GAQGI 160 (300)
Q Consensus 156 GAdgV 160 (300)
|||.|
T Consensus 100 GAD~I 104 (297)
T 4adt_A 100 KVDML 104 (297)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 99999
No 263
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=80.13 E-value=3.2 Score=36.41 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=52.9
Q ss_pred HHHc-CCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cC---hhchHHHHHHhhCC----CCCcEEEccCCCChHHHH
Q 022271 83 ILSE-KVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DG---LISLLPMVVDLIGD----RDIPIIAAGGIVDARGYV 150 (300)
Q Consensus 83 ~~e~-g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~---~~~ll~~v~~~~~~----~~iPViaaGGI~~g~~v~ 150 (300)
+... |.+++.+....|++++++.+++.+..++.. .. .+..++++.+.+++ .++||++.|...|.+-
T Consensus 152 L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~~~-- 229 (262)
T 1xrs_B 152 LERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINNEI-- 229 (262)
T ss_dssp GGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCHHH--
T ss_pred HHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCHHH--
Confidence 3456 888888877778889999998888777754 22 45556666665532 1388988888776533
Q ss_pred HHHHCCCcEEEe
Q 022271 151 AALSLGAQGICL 162 (300)
Q Consensus 151 aal~lGAdgV~~ 162 (300)
+..+|||++.-
T Consensus 230 -a~~iGad~~~~ 240 (262)
T 1xrs_B 230 -AKELGYDAGFG 240 (262)
T ss_dssp -HHTTTCSEEEC
T ss_pred -HHHcCCeEEEC
Confidence 55679997653
No 264
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=79.64 E-value=6.3 Score=28.76 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=47.9
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|.. .-+.++.++++.. ++|||+-.+-.+......++..
T Consensus 35 ~~~al~~~~~~~~dlii~D~~~p~~-----------------~g~~~~~~lr~~~---~~~ii~~t~~~~~~~~~~~~~~ 94 (120)
T 3f6p_A 35 GNEAVEMVEELQPDLILLDIMLPNK-----------------DGVEVCREVRKKY---DMPIIMLTAKDSEIDKVIGLEI 94 (120)
T ss_dssp HHHHHHHHHTTCCSEEEEETTSTTT-----------------HHHHHHHHHHTTC---CSCEEEEEESSCHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCCEEEEeCCCCCC-----------------CHHHHHHHHHhcC---CCCEEEEECCCChHHHHHHHhC
Confidence 3556666667777888777655421 1245566666532 6899999998999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 95 ga~~~l~ 101 (120)
T 3f6p_A 95 GADDYVT 101 (120)
T ss_dssp TCCEEEE
T ss_pred CcceeEc
Confidence 9998764
No 265
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=79.59 E-value=17 Score=27.49 Aligned_cols=67 Identities=12% Similarity=0.006 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....+. ...+.++.++++.. .++|||+-.+-.+......++..|
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~g 101 (153)
T 3cz5_A 41 GEAYRLYRETTPDIVVMDLTLPG-----------------PGGIEATRHIRQWD--GAARILIFTMHQGSAFALKAFEAG 101 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSCCSS-----------------SCHHHHHHHHHHHC--TTCCEEEEESCCSHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCEEEEecCCCC-----------------CCHHHHHHHHHHhC--CCCeEEEEECCCCHHHHHHHHHCC
Confidence 45555566666777776654321 12345666666653 268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|+++..
T Consensus 102 ~~~~l~ 107 (153)
T 3cz5_A 102 ASGYVT 107 (153)
T ss_dssp CSEEEE
T ss_pred CcEEEe
Confidence 998764
No 266
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=79.57 E-value=1.9 Score=39.90 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=93.6
Q ss_pred cccC--CccceecCCCCCC--C----CcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCC-
Q 022271 5 GMLG--FEYGIVQAPLGPD--I----SGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP- 75 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g--~----s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~- 75 (300)
+++| ++.|++.+||+ + . ++..++.++.++|...+++.....+.+++. . ..+.|..+++..+..
T Consensus 65 ~i~G~~l~~Pv~iap~~-~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~----~---~~~~~~~fQly~~~~~ 136 (380)
T 1p4c_A 65 EVLGKRQSMPLLIGPTG-LNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLA----R---QCDGDLWFQLYVIHRE 136 (380)
T ss_dssp EETTEEESSSEEECCCS-CGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHH----H---HCCSCEEEEECCSSHH
T ss_pred EECCeecCCceEecCcc-ccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHH----h---ccCCCeEEEEEechHH
Confidence 4555 57899999997 4 3 456899999999977667652222344332 1 146788888876551
Q ss_pred -cHHHHHHHHHcCCcEEEEcCCCCc-----HHHHHHHH-------------------HCCCe--------EeeccChhch
Q 022271 76 -HNENIKAILSEKVAVLQVSWGEYS-----EELVLEAH-------------------SAGVK--------VVPQDGLISL 122 (300)
Q Consensus 76 -~~~~~~~~~e~g~~~i~~~~G~~~-----~~~v~~~~-------------------~~G~~--------v~~~~~~~~l 122 (300)
..+.++.+.+.|++.+.++...|. .++-..+. ..+.. .+...-.+..
T Consensus 137 ~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~ 216 (380)
T 1p4c_A 137 IAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEA 216 (380)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHH
Confidence 246678888899988876443321 11100000 00000 0000113456
Q ss_pred HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 123 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 123 l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
+.++++.+ ++||++- |+.+.+++..+..+|||+|.++.
T Consensus 217 i~~i~~~~---~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs~ 254 (380)
T 1p4c_A 217 LRWLRDLW---PHKLLVK-GLLSAEDADRCIAEGADGVILSN 254 (380)
T ss_dssp HHHHHHHC---CSEEEEE-EECCHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHhc---CCCEEEE-ecCcHHHHHHHHHcCCCEEEEcC
Confidence 77777776 7999986 58999999999999999999943
No 267
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=79.55 E-value=2.9 Score=35.78 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+++.|+++|.+..-.+ .....+.++++.+. ++ .+.+|-+.+.+++..++..|
T Consensus 41 ~~~~~al~~gGv~~iel~~k~~-------------------~~~~~i~~l~~~~~--~~-~igagtvl~~d~~~~A~~aG 98 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTLRSQ-------------------HGLKAIQVLREQRP--EL-CVGAGTVLDRSMFAAVEAAG 98 (225)
T ss_dssp HHHHHHHHHTTCCEEEEESSST-------------------HHHHHHHHHHHHCT--TS-EEEEECCCSHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEecCCc-------------------cHHHHHHHHHHhCc--cc-EEeeCeEeeHHHHHHHHHCC
Confidence 4566777777777777764332 12234555655552 34 46677799999999999999
Q ss_pred CcEEEec
Q 022271 157 AQGICLG 163 (300)
Q Consensus 157 AdgV~~G 163 (300)
||+|..|
T Consensus 99 Ad~v~~p 105 (225)
T 1mxs_A 99 AQFVVTP 105 (225)
T ss_dssp CSSEECS
T ss_pred CCEEEeC
Confidence 9999876
No 268
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=79.55 E-value=32 Score=30.23 Aligned_cols=142 Identities=13% Similarity=0.066 Sum_probs=76.8
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 5666666788777775532 357777777777776653 35766655432211 3345556666777665421
Q ss_pred --CCCc-HHHHHHHH----HCCCeEeec------------------------------cChhchHHHHHHhhCCCCCcEE
Q 022271 96 --GEYS-EELVLEAH----SAGVKVVPQ------------------------------DGLISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 96 --G~~~-~~~v~~~~----~~G~~v~~~------------------------------~~~~~ll~~v~~~~~~~~iPVi 138 (300)
..|+ +.+++..+ ..++.++.- .+.+..+.++.+...+.+..|+
T Consensus 107 ~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ssgd~~~~~~~~~~~~~~~f~v~ 186 (292)
T 3daq_A 107 YYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALY 186 (292)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECCCCHHHHHHHHTTSCTTTSEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHHCCCCCEEEE
Confidence 1111 22222211 123333311 1234445555554421134443
Q ss_pred EccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.|. ...+..++.+|++|++-|+..++.++
T Consensus 187 -~G~---d~~~~~~l~~G~~G~is~~~n~~P~~ 215 (292)
T 3daq_A 187 -SGN---DDNVVEYYQRGGQGVISVIANVIPKE 215 (292)
T ss_dssp -ESC---GGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred -ECC---HHHHHHHHhcCCCEEEeCHHHhhHHH
Confidence 333 34578899999999999998876654
No 269
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=79.43 E-value=1.7 Score=39.86 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=32.0
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
+..+.++++... ++||++ |++.+.+++..+..+|||+|.++
T Consensus 149 ~~~i~~lr~~~~--~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 149 VEFVKDVRKRFP--QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHCT--TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcC--CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 345666666542 688885 67899999999999999999885
No 270
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=79.22 E-value=5 Score=36.06 Aligned_cols=122 Identities=13% Similarity=0.099 Sum_probs=65.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH-HH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG-YV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v~---aa 152 (300)
..+++.+++.|++.+.+. |..- +.... ...--..++..+++.+++ ++|||+.=|=.+-++ +. .+
T Consensus 48 ~~lv~~li~~Gv~Gi~v~-GtTG-E~~~L---------s~~Er~~v~~~~v~~~~g-rvpViaGvg~~~t~~ai~la~~A 115 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPL-GSTG-EGAYL---------SDPEWDEVVDFTLKTVAH-RVPTIVSVSDLTTAKTVRRAQFA 115 (315)
T ss_dssp HHHHHHHHHTTCSEEECS-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-ChhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 467788888999988765 3211 00000 000012455556666543 689988655334444 32 45
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNW 215 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~ 215 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+++.++
T Consensus 116 ~~~Gadavlv~~P~y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 116 ESLGAEAVMVLPISYWKLNEAEVFQ-HYRAVGEAIGVP-VMLYN---NPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHTTCSEEEECCCCSSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHhCCCc-EEEEe---CcchhCcCCCHHHHHHH
Confidence 569999999999988753 111222 333444444433 23443 24444455666666666
No 271
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=78.99 E-value=34 Score=30.22 Aligned_cols=159 Identities=18% Similarity=0.167 Sum_probs=86.9
Q ss_pred cCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 7 LGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 7 lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
-|+ +|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-...
T Consensus 14 ~Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~ 92 (301)
T 1xky_A 14 GTI-ATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNN 92 (301)
T ss_dssp CSE-EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred Cce-EEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 344 3444457741 1222 35666666788777765532 367888888888877654 357666654432
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEeec----------------------------
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVPQ---------------------------- 116 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~~---------------------------- 116 (300)
.. .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..++.++.-
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 172 (301)
T 1xky_A 93 THASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIK 172 (301)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 21 3445666677777765421 1111 22222221 234443321
Q ss_pred --cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 --DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 --~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++++... .+..| ..| +...+..++.+|++|++-++..++.++
T Consensus 173 dssgd~~~~~~~~~~~~-~~f~v-~~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 224 (301)
T 1xky_A 173 DAGGDVLTMTEIIEKTA-DDFAV-YSG---DDGLTLPAMAVGAKGIVSVASHVIGNE 224 (301)
T ss_dssp ECSSCHHHHHHHHHHSC-TTCEE-EES---SGGGHHHHHHTTCCEEEESTHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcC-CCeEE-EEC---cHHHHHHHHHcCCCEEEcCHHHhCHHH
Confidence 123334445554432 13433 444 234578889999999999999987754
No 272
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=78.98 E-value=7.5 Score=34.59 Aligned_cols=122 Identities=13% Similarity=0.240 Sum_probs=64.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHH-HHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHHH---H
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEE-LVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGYV---A 151 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~-~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v~---a 151 (300)
...++.+++.|++.+.+. |..-+. .+.. .--..++..+++.+++ ++|||+.=|= ++.+.+. .
T Consensus 36 ~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~-----------eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~ 102 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVG-GTTGESPTLTS-----------EEKVALYRHVVSVVDK-RVPVIAGTGSNNTHASIDLTKK 102 (301)
T ss_dssp HHHHHHHHHTTCCEEEES-STTTTGGGSCH-----------HHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccChhhCCH-----------HHHHHHHHHHHHHhCC-CceEEeCCCCCCHHHHHHHHHH
Confidence 456778888899988765 321100 0000 0012445556666543 6899876554 4444332 3
Q ss_pred HHHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 152 ALSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
+-.+|||++++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 103 A~~~Gadavlv~~P~y~~~s~~~l~~~f-~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 103 ATEVGVDAVMLVAPYYNKPSQEGMYQHF-KAIAESTPLP-VMLYN---VPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHHH-HHHHHTCSSC-EEEEE---CHHHHSSCCCHHHHHHHH
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CccccCCCCCHHHHHHHH
Confidence 4569999999999998653 11122223 3444444433 23443 234333445555555543
No 273
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=78.82 E-value=34 Score=30.10 Aligned_cols=101 Identities=11% Similarity=-0.033 Sum_probs=63.5
Q ss_pred ccceecCCCCCCCCcHHHHHHHHhCCceEEecC--------C----CCCCHHHHHHHHHHHHhhcC-CcEEeeeec-CCC
Q 022271 10 EYGIVQAPLGPDISGPELVAAVANAGGLGLLRA--------P----DWEAPDYLRDLIRKTRSLTE-RPFGVGVVL-AFP 75 (300)
Q Consensus 10 ~~Pii~apM~~g~s~~~la~avs~aGglG~i~~--------~----~~~~~~~l~~~i~~~r~~~~-~P~gvnl~~-~~~ 75 (300)
.-||+. | ++-+...|..+.++|.=-++.. | ...+.+++....+.+++.++ .|+-+.+.. .+.
T Consensus 28 g~~i~m-~---tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~ 103 (275)
T 3vav_A 28 GEKIAM-L---TCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYG 103 (275)
T ss_dssp TCCEEE-E---ECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCS
T ss_pred CCcEEE-E---eCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCC
Confidence 346653 2 4567777777788874222211 0 12466777777888876664 556666654 222
Q ss_pred c-H---HHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEe
Q 022271 76 H-N---ENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVV 114 (300)
Q Consensus 76 ~-~---~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~ 114 (300)
. + +.+..+.++|+..|-+--|..+.+.++.+.++|++++
T Consensus 104 s~~~a~~~a~rl~kaGa~aVklEdg~~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 104 TPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVC 146 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCchhHHHHHHHHHHCCCCEE
Confidence 2 2 2345566679999988766556778888888898886
No 274
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=78.80 E-value=4.5 Score=35.89 Aligned_cols=124 Identities=19% Similarity=0.251 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+.+. |... +.... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 26 ~~lv~~li~~Gv~gl~v~-GttG-E~~~L---------t~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 93 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVN-GTTA-ESPTL---------TTDEKELILKTVIDLVDK-RVPVIAGTGTNDTEKSIQASIQA 93 (292)
T ss_dssp HHHHHHHHHTTCCEEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-ccccC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCcccHHHHHHHHHHH
Confidence 456778888889888765 3211 00000 000012345556666543 69999876644555433 34
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhhc
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 217 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 217 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.+
T Consensus 94 ~~~Gadavlv~~P~y~~~~~~~l~~-~f~~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 94 KALGADAIMLITPYYNKTNQRGLVK-HFEAIADAVKLP-VVLYN---VPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHHCSC-EEEEE---CHHHHSCCCCHHHHHHHHT
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHhCCCC-EEEEe---cccccCCCCCHHHHHHHhc
Confidence 558999999999987653 111222 233344443333 22443 2444445565556655543
No 275
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=78.67 E-value=9.5 Score=28.49 Aligned_cols=70 Identities=16% Similarity=0.059 Sum_probs=47.3
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++.++++.-...++|||.-.+-.+......++.+
T Consensus 37 ~~~al~~~~~~~~dlvl~D~~lp~-----------------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ 99 (136)
T 3t6k_A 37 GEEALQQIYKNLPDALICDVLLPG-----------------IDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEA 99 (136)
T ss_dssp HHHHHHHHHHSCCSEEEEESCCSS-----------------SCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhc
Confidence 355566666666777776654431 123456666665311126899999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 100 ga~~~l~ 106 (136)
T 3t6k_A 100 GANDYLA 106 (136)
T ss_dssp TCSEEEE
T ss_pred CcceEEe
Confidence 9998654
No 276
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=78.65 E-value=9.6 Score=28.60 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=46.4
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....+. ...+.++.++++.-...++|||+-.+-.+......++.+
T Consensus 41 ~~~a~~~l~~~~~dlii~d~~l~~-----------------~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~ 103 (147)
T 2zay_A 41 AIEAVPVAVKTHPHLIITEANMPK-----------------ISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDM 103 (147)
T ss_dssp HHHHHHHHHHHCCSEEEEESCCSS-----------------SCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCC-----------------CCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhC
Confidence 344555555556666666554321 123456666665211127999999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 104 g~~~~l~ 110 (147)
T 2zay_A 104 GFIDFIA 110 (147)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 277
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=78.57 E-value=14 Score=31.78 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=24.3
Q ss_pred cCCCChHHHHHHHHCCCcEEEecccccc
Q 022271 141 GGIVDARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 141 GGI~~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
-.+.|.+++.++...|||.|.+|..|-.
T Consensus 140 ~S~ht~~Ea~~A~~~GaDyI~vgpvf~T 167 (243)
T 3o63_A 140 RSTHDPDQVAAAAAGDADYFCVGPCWPT 167 (243)
T ss_dssp EEECSHHHHHHHHHSSCSEEEECCSSCC
T ss_pred EeCCCHHHHHHHhhCCCCEEEEcCccCC
Confidence 3479999999999999999999987754
No 278
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=78.56 E-value=26 Score=30.85 Aligned_cols=88 Identities=14% Similarity=0.100 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCcEEEEcC--CCCcHH---HHHHHHHCCC---eEeecc---------ChhchHHHHHHhhCCCCCcEEE
Q 022271 77 NENIKAILSEKVAVLQVSW--GEYSEE---LVLEAHSAGV---KVVPQD---------GLISLLPMVVDLIGDRDIPIIA 139 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~--G~~~~~---~v~~~~~~G~---~v~~~~---------~~~~ll~~v~~~~~~~~iPVia 139 (300)
.+.++.+...+-+++.... +. +.+ .++.++..|- .+++.- -.+..++.+++... ++||+.
T Consensus 119 ~~ll~~~a~~~kPV~lk~G~~~t-~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~--~~pV~~ 195 (280)
T 2qkf_A 119 TDLVVAMAKTGNVVNIKKPQFLS-PSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCG--NLPVIF 195 (280)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSC-GGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTT--TCCEEE
T ss_pred HHHHHHHHcCCCcEEEECCCCCC-HHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCC--CCCEEE
Confidence 3455555555666655442 22 233 3334455553 333321 13456777777641 589998
Q ss_pred c-----------cCCCCh------HHHHHHHHCCCcEEEeccccc
Q 022271 140 A-----------GGIVDA------RGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 140 a-----------GGI~~g------~~v~aal~lGAdgV~~GT~fl 167 (300)
. ||-+.| .-..++.++||+|+++=+.|-
T Consensus 196 D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 196 DVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp EHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred ECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 3 444455 224466789999999966654
No 279
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=78.46 E-value=26 Score=32.60 Aligned_cols=88 Identities=5% Similarity=-0.100 Sum_probs=59.9
Q ss_pred HHHHHHHHHc-CCc--EE-EEcCCCCcH---HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCCh
Q 022271 77 NENIKAILSE-KVA--VL-QVSWGEYSE---ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDA 146 (300)
Q Consensus 77 ~~~~~~~~e~-g~~--~i-~~~~G~~~~---~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g 146 (300)
.+.++.+.+. |++ +. ..+.+-.+. .+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+.
T Consensus 214 ~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~ 290 (425)
T 3vcn_A 214 PKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHT---TTPLAVGEIFAHV 290 (425)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHC---CSCEEECTTCCSG
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcC---CCCEEeCCCcCCH
Confidence 4456666553 444 22 233332233 34556667888888651 2466788888887 8999999999999
Q ss_pred HHHHHHHHCC-CcEEEeccccc
Q 022271 147 RGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 147 ~~v~aal~lG-AdgV~~GT~fl 167 (300)
.++..++..| +|.|++--..+
T Consensus 291 ~~~~~~i~~~a~d~v~~k~~~~ 312 (425)
T 3vcn_A 291 WDAKQLIEEQLIDYLRATVLHA 312 (425)
T ss_dssp GGTHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHHcCCCCeEecChhhc
Confidence 9999999987 78888864443
No 280
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=78.42 E-value=24 Score=29.84 Aligned_cols=44 Identities=18% Similarity=0.060 Sum_probs=32.5
Q ss_pred hchHHHHHHhhCC-CCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 120 ISLLPMVVDLIGD-RDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 120 ~~ll~~v~~~~~~-~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
+.++.++.+..+. .--+-|.+-.+.+..++..+..+|||.+-+.
T Consensus 142 ~~~v~~i~~~~~~~~~~t~ilaAS~R~~~~v~~~a~~G~d~~Tip 186 (212)
T 3r8r_A 142 LDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMP 186 (212)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEBSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEecCCCHHHHHHHHHcCCCEEEcC
Confidence 4566666665531 1245677778999999999999999987764
No 281
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.27 E-value=5.5 Score=35.75 Aligned_cols=123 Identities=21% Similarity=0.192 Sum_probs=64.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
...++.+++.|++.+.+. |... +.... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 47 ~~lv~~li~~Gv~Gl~v~-GtTG-E~~~L---------s~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~eai~la~~A 114 (314)
T 3qze_A 47 AKLVDFHLQEGTNAIVAV-GTTG-ESATL---------DVEEHIQVIRRVVDQVKG-RIPVIAGTGANSTREAVALTEAA 114 (314)
T ss_dssp HHHHHHHHHHTCCEEEES-SGGG-TGGGC---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-ChhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 456778888899988775 3311 00000 000012345556666543 69998865544444433 44
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 115 ~~~Gadavlv~~P~y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 115 KSGGADACLLVTPYYNKPTQEGMYQ-HFRHIAEAVAIP-QILYN---VPGRTSCDMLPETVERLS 174 (314)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHSCSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHH-HHHHHHHhcCCC-EEEEe---CccccCCCCCHHHHHHHh
Confidence 569999999999988743 111122 333444444433 23443 234334455555555544
No 282
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=78.12 E-value=3.8 Score=37.45 Aligned_cols=66 Identities=6% Similarity=-0.065 Sum_probs=49.3
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
++.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++....+..
T Consensus 209 ~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 278 (371)
T 2ovl_A 209 RAARALAPFDLHWIEEPTIPDDLVGNARIVRES---GHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGG 278 (371)
T ss_dssp HHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHH---CSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTS
T ss_pred HHHHHHHhcCCCEEECCCCcccHHHHHHHHhhC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCC
Confidence 34445556777766541 2456677888877 79999999999999999999875 7999997655543
No 283
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=78.05 E-value=3.2 Score=35.93 Aligned_cols=106 Identities=11% Similarity=0.207 Sum_probs=60.8
Q ss_pred HHHHHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHHH----HHCCCeEeeccC
Q 022271 51 LRDLIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLEA----HSAGVKVVPQDG 118 (300)
Q Consensus 51 l~~~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~~----~~~G~~v~~~~~ 118 (300)
+.+.+++.|+...+.+..-++..+++ .+.++.+.+.|++.|.+.. ..| ..++++.. .+.|... ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~---~~ 81 (262)
T 1rd5_A 5 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTM---DA 81 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCH---HH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCH---HH
Confidence 44555666655455565555555553 3457778889999998852 111 12334332 2344211 11
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChH---HHHHHHHCCCcEEEec
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDAR---GYVAALSLGAQGICLG 163 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~---~v~aal~lGAdgV~~G 163 (300)
.+.++.++++.. ++||+.-+ ..++. ++..+...|||||.+.
T Consensus 82 ~~~~i~~ir~~~---~~Pv~~m~-~~~~~~~~~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 82 VLEMLREVTPEL---SCPVVLLS-YYKPIMFRSLAKMKEAGVHGLIVP 125 (262)
T ss_dssp HHHHHHHHGGGC---SSCEEEEC-CSHHHHSCCTHHHHHTTCCEEECT
T ss_pred HHHHHHHHHhcC---CCCEEEEe-cCcHHHHHHHHHHHHcCCCEEEEc
Confidence 345566666654 79998753 22321 2345888999999985
No 284
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=77.92 E-value=13 Score=28.12 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=34.0
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.+.++.++++.. .++|||+-.+-.+...+..++.+||+++..
T Consensus 76 g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3eul_A 76 GAQVAAAVRSYE--LPTRVLLISAHDEPAIVYQALQQGAAGFLL 117 (152)
T ss_dssp HHHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcC--CCCeEEEEEccCCHHHHHHHHHcCCCEEEe
Confidence 356666776653 378999999999999999999999998765
No 285
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.89 E-value=35 Score=29.87 Aligned_cols=141 Identities=15% Similarity=0.107 Sum_probs=79.0
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.++. .++.++-.+.++.+.+.. ..|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 5555556778767765432 257787777888776653 35765655433221 3445666667777765421
Q ss_pred --CCCc-HHHHHHHH----HCCCeEeec------------------------------cChhchHHHHHHhhCCCCCcEE
Q 022271 96 --GEYS-EELVLEAH----SAGVKVVPQ------------------------------DGLISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 96 --G~~~-~~~v~~~~----~~G~~v~~~------------------------------~~~~~ll~~v~~~~~~~~iPVi 138 (300)
..|+ +.+++..+ ..++.++.- .+.+..+.++++... .+..|+
T Consensus 106 ~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ssgd~~~~~~~~~~~~-~~f~v~ 184 (291)
T 3tak_A 106 YYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGDVPRGKALIDALN-GKMAVY 184 (291)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCCHHHHHHHHHHHT-TSSEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHcC-CCeEEE
Confidence 1111 22222221 234444321 123444555555543 144443
Q ss_pred EccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.| +...+..++.+|++|++-++..++.++
T Consensus 185 -~G---~d~~~~~~l~~G~~G~is~~~n~~P~~ 213 (291)
T 3tak_A 185 -SG---DDETAWELMLLGADGNISVTANIAPKA 213 (291)
T ss_dssp -EC---CHHHHHHHHHTTCCEEEESGGGTCHHH
T ss_pred -EC---cHHHHHHHHHCCCCEEEechhhhcHHH
Confidence 43 345577889999999999999887755
No 286
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=77.86 E-value=2.4 Score=39.16 Aligned_cols=149 Identities=11% Similarity=0.072 Sum_probs=88.5
Q ss_pred cccC--CccceecCCCCCCCCcHH------HHHHHHhCCceEEecCCC--CCCHHHHHHHHHHHHhh-cCCcEEeeeecC
Q 022271 5 GMLG--FEYGIVQAPLGPDISGPE------LVAAVANAGGLGLLRAPD--WEAPDYLRDLIRKTRSL-TERPFGVGVVLA 73 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~~~------la~avs~aGglG~i~~~~--~~~~~~l~~~i~~~r~~-~~~P~gvnl~~~ 73 (300)
+++| +++|++.+||+ |.+... |+.++.+.|....++... ..+|+. .+.-+.+|+. .+.|+--|+-..
T Consensus 52 ~~~g~~l~~Pv~ia~Mt-Ggt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~-~~s~~~vr~~ap~~~~~anlg~~ 129 (368)
T 3vkj_A 52 KFFRKEISVPVMVTGMT-GGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA-RESFAIVRKVAPTIPIIANLGMP 129 (368)
T ss_dssp EETTEEESSSEEECCCC-CSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG-SHHHHHHHHHCSSSCEEEEEEGG
T ss_pred EECCEeccCCeEEecCC-CCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH-HhhHHHHHHhCcCcceecCcCee
Confidence 4445 57799999998 677643 799989988665555420 013332 2222334433 456776666552
Q ss_pred ---C-CcHHHH-HHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEc--cCCCCh
Q 022271 74 ---F-PHNENI-KAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAA--GGIVDA 146 (300)
Q Consensus 74 ---~-~~~~~~-~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaa--GGI~~g 146 (300)
. ...+.+ +.+...+++.+.++.. +.++.+. ..|-.-+. .+.+..+.++++.+ ++||++- |+-.+.
T Consensus 130 ql~~~~~~~~~~~av~~~~a~al~Ihln-~~~~~~~---p~g~~~~~-~~~~~~i~~i~~~~---~vPVivK~vG~g~s~ 201 (368)
T 3vkj_A 130 QLVKGYGLKEFQDAIQMIEADAIAVHLN-PAQEVFQ---PEGEPEYQ-IYALEKLRDISKEL---SVPIIVKESGNGISM 201 (368)
T ss_dssp GGGTTCCHHHHHHHHHHTTCSEEEEECC-HHHHHHS---SSCCCBCB-THHHHHHHHHHTTC---SSCEEEECSSSCCCH
T ss_pred ecCCCCCHHHHHHHHHHhcCCCeEEEec-chhhhhC---CCCCchhh-HHHHHHHHHHHHHc---CCCEEEEeCCCCCCH
Confidence 1 123444 3343457777777753 3333332 12211110 02455667777665 8999994 444589
Q ss_pred HHHHHHHHCCCcEEEec
Q 022271 147 RGYVAALSLGAQGICLG 163 (300)
Q Consensus 147 ~~v~aal~lGAdgV~~G 163 (300)
+++..+..+|||+|.++
T Consensus 202 ~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 202 ETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp HHHHHHHHTTCCEEECC
T ss_pred HHHHHHHhCCCCEEEEe
Confidence 99999999999999993
No 287
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=77.84 E-value=37 Score=30.04 Aligned_cols=157 Identities=13% Similarity=0.067 Sum_probs=85.6
Q ss_pred cCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 7 LGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 7 lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
-|+ +|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-...
T Consensus 17 ~Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~ 95 (304)
T 3l21_A 17 GTL-LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYD 95 (304)
T ss_dssp CSE-EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSC
T ss_pred Cce-EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 355 4444457741 1222 35666666788777775532 357788888888877754 347766654332
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEeec----------------------------
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVPQ---------------------------- 116 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~~---------------------------- 116 (300)
.. .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..++.++.-
T Consensus 96 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 175 (304)
T 3l21_A 96 TAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVX 175 (304)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEE
Confidence 11 3455666677777775531 1111 22322222 124444321
Q ss_pred --cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 --DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 --~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++...- +..|+ .| +...+..++.+||+|++-++..++.++
T Consensus 176 dssgd~~~~~~~~~~~---~f~v~-~G---~d~~~l~~l~~Ga~G~is~~~n~~P~~ 225 (304)
T 3l21_A 176 DAKADLHSGAQIMADT---GLAYY-SG---DDALNLPWLRMGATGFISVIAHLAAGQ 225 (304)
T ss_dssp ECSCCHHHHHHHHHHH---CCEEE-ES---SGGGHHHHHHHTCCEEEESTHHHHHHH
T ss_pred CCCCCHHHHHHHhcCC---CeEEE-eC---chHHHHHHHHcCCCEEEecHHhhhHHH
Confidence 12233333333211 45554 44 335577889999999999999888765
No 288
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=77.78 E-value=7.5 Score=34.38 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=63.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHHHH---H
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGYVA---A 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v~a---a 152 (300)
..+++.+++.|++.+... |..-+ .... ...--..++..+++.+++ ++|||+.=|= ++.+.+.. +
T Consensus 25 ~~lv~~li~~Gv~gl~~~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a 92 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSV-GTTGE-SATL---------NHDEHADVVMMTLDLADG-RIPVIAGTGANATAEAISLTQRF 92 (292)
T ss_dssp HHHHHHHHHHTCCEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEC-ccccc-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHH
Confidence 466777888899888765 32110 0000 000012455556666543 6899865554 44444332 2
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 93 ~~~Gadavlv~~P~y~~~s~~~l~~-~f~~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 93 NDSGIVGCLTVTPYYNRPSQEGLYQ-HFKAIAEHTDLP-QILYN---VPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp TTSSCSEEEEECCCSSCCCHHHHHH-HHHHHHTTCSSC-EEEEC---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHhcCCC-EEEEe---CcchhccCCCHHHHHHHH
Confidence 348999999999998643 111222 223444444433 23443 234334445555555543
No 289
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=77.78 E-value=7.4 Score=34.67 Aligned_cols=122 Identities=19% Similarity=0.268 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHH-HHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----H
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEE-LVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----A 151 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~-~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----a 151 (300)
..+++.+++.|++.+.+. |...+. .+.. .--..++..+++.+++ ++|||+.=|=.+-++.. .
T Consensus 40 ~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~-----------~Er~~v~~~~~~~~~g-rvpviaGvg~~st~~ai~la~~ 106 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLA-GTTGESPTTTA-----------AEKLELLKAVREEVGD-RAKLIAGVGTNNTRTSVELAEA 106 (304)
T ss_dssp HHHHHHHHHTTCCEEEES-STTTTTTTSCH-----------HHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccChhhCCH-----------HHHHHHHHHHHHHhCC-CCcEEecCCCCCHHHHHHHHHH
Confidence 467788888899988765 321100 0000 0012345556666543 69998765544434332 3
Q ss_pred HHHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 152 ALSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
+-.+|||++++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 107 A~~~Gadavlv~~P~y~~~~~~~l~~~f-~~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 107 AASAGADGLLVVTPYYSKPSQEGLLAHF-GAIAAATEVP-ICLYD---IPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHHH-HHHHHHCCSC-EEEEE---CHHHHSSCCCHHHHHHHT
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CccccCcCCCHHHHHHHH
Confidence 4558999999999988642 11122223 3344444433 23443 233333445555555543
No 290
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=77.55 E-value=15 Score=27.93 Aligned_cols=69 Identities=13% Similarity=0.013 Sum_probs=48.7
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+...+..++.
T Consensus 46 ~~~~a~~~l~~~~~dlvi~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~ 106 (153)
T 3hv2_A 46 DATQALQLLASREVDLVISAAHLPQ-----------------MDGPTLLARIHQQY--PSTTRILLTGDPDLKLIAKAIN 106 (153)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSS-----------------SCHHHHHHHHHHHC--TTSEEEEECCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEEeCCCCc-----------------CcHHHHHHHHHhHC--CCCeEEEEECCCCHHHHHHHHh
Confidence 3455566666667777777654431 12356666676643 2799999999999999999999
Q ss_pred CC-CcEEEe
Q 022271 155 LG-AQGICL 162 (300)
Q Consensus 155 lG-AdgV~~ 162 (300)
.| |+++..
T Consensus 107 ~g~~~~~l~ 115 (153)
T 3hv2_A 107 EGEIYRYLS 115 (153)
T ss_dssp TTCCSEEEC
T ss_pred CCCcceEEe
Confidence 99 888654
No 291
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=77.28 E-value=5.9 Score=36.43 Aligned_cols=97 Identities=15% Similarity=0.185 Sum_probs=53.2
Q ss_pred CCcEEeeeecCCC----cHHHHHHHHH--cCCcEEEEcCCCCcHHHHHHHHHCCCeEeec-cChhchHHHHHHhhC----
Q 022271 63 ERPFGVGVVLAFP----HNENIKAILS--EKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-DGLISLLPMVVDLIG---- 131 (300)
Q Consensus 63 ~~P~gvnl~~~~~----~~~~~~~~~e--~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-~~~~~ll~~v~~~~~---- 131 (300)
+.|+++|+..+.. .+++++.+.. ..++.|.++.+||-.+ |...+.. ..+..++..++++.+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~--------G~~~l~~~~~l~~ll~av~~~~~~~~~ 217 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA--------GLRSLQGKAELRRLLTKVLQERDGLRR 217 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST--------TGGGGGSHHHHHHHHHHHHHHHHTSCG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC--------CccccCCHHHHHHHHHHHHHHHhhccc
Confidence 6799999977532 2344443332 3589999999997431 2211111 112345555554310
Q ss_pred CCCCcEEEcc--CCC--ChHHHHH-HHHCCCcEEEeccccc
Q 022271 132 DRDIPIIAAG--GIV--DARGYVA-ALSLGAQGICLGTRFV 167 (300)
Q Consensus 132 ~~~iPViaaG--GI~--~g~~v~a-al~lGAdgV~~GT~fl 167 (300)
..++||++=- ++. +-.++++ +...|||+|.+-.+..
T Consensus 218 ~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~ 258 (367)
T 3zwt_A 218 VHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTV 258 (367)
T ss_dssp GGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBS
T ss_pred cCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 0268887643 333 2223443 4568999999854443
No 292
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=77.22 E-value=15 Score=27.78 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=34.2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.+.++.++++.. .++|||+-.+-.+...+..++..||+++..
T Consensus 81 g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 122 (150)
T 4e7p_A 81 GLEVLEWIRSEK--LETKVVVVTTFKRAGYFERAVKAGVDAYVL 122 (150)
T ss_dssp HHHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhC--CCCeEEEEeCCCCHHHHHHHHHCCCcEEEe
Confidence 356666776653 379999999999999999999999998765
No 293
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=77.10 E-value=14 Score=27.30 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+......++..|
T Consensus 37 ~~al~~~~~~~~dlvl~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g 97 (132)
T 3crn_A 37 GEGLAKIENEFFNLALFXIKLPD-----------------MEGTELLEKAHKLR--PGMKKIMVTGYASLENSVFSLNAG 97 (132)
T ss_dssp HHHHHHHHHSCCSEEEECSBCSS-----------------SBHHHHHHHHHHHC--TTSEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCEEEEecCCCC-----------------CchHHHHHHHHhhC--CCCcEEEEeccccHHHHHHHHhcc
Confidence 44555555556666666554331 12245556665543 268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 98 a~~~l~ 103 (132)
T 3crn_A 98 ADAYIM 103 (132)
T ss_dssp CSEEEE
T ss_pred chhhcc
Confidence 998765
No 294
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=77.09 E-value=3.7 Score=36.29 Aligned_cols=87 Identities=11% Similarity=0.032 Sum_probs=57.5
Q ss_pred CCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC
Q 022271 63 ERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG 142 (300)
Q Consensus 63 ~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG 142 (300)
..|+-+.+. ..+.++.+.+.|++.|.+..+.+ .+ .. ...|... ...+..+.++++.+ ++|+++..+
T Consensus 21 ~~~~i~~~~----~~~~a~~~~~~Ga~~i~~~e~v~-~~-~~--~~~G~~~---~~~~~~i~~i~~~~---~~Pvi~~~~ 86 (297)
T 2zbt_A 21 KGGVIMDVT----TPEQAVIAEEAGAVAVMALERVP-AD-IR--AQGGVAR---MSDPKIIKEIMAAV---SIPVMAKVR 86 (297)
T ss_dssp TTEEEEEES----SHHHHHHHHHHTCSEEEECSSCH-HH-HH--HTTCCCC---CCCHHHHHHHHTTC---SSCEEEEEE
T ss_pred hCCeeeeec----hHHHHHHHHHCCCcEEEeccccc-hH-HH--hhcCCcc---CCCHHHHHHHHHhc---CCCeEEEec
Confidence 445544333 26788888899999988754332 21 11 1122111 12355677777665 799999888
Q ss_pred CCChHHHHHHHHCCCcEEEecc
Q 022271 143 IVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 143 I~~g~~v~aal~lGAdgV~~GT 164 (300)
+.+.+.+..++.+|||+| -|+
T Consensus 87 ~~~~~~~~~~~~aGad~v-~~~ 107 (297)
T 2zbt_A 87 IGHFVEAMILEAIGVDFI-DES 107 (297)
T ss_dssp TTCHHHHHHHHHTTCSEE-EEE
T ss_pred cCCHHHHHHHHHCCCCEE-eee
Confidence 889999999999999999 444
No 295
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=76.99 E-value=17 Score=25.98 Aligned_cols=68 Identities=18% Similarity=0.076 Sum_probs=47.5
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..++++.+....|. ..-+.++.++++.. .++|||+-.+-.+......++..
T Consensus 33 ~~~a~~~~~~~~~dlil~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~ 93 (121)
T 2pl1_A 33 AKEADYYLNEHIPDIAIVDLGLPD-----------------EDGLSLIRRWRSND--VSLPILVLTARESWQDKVEVLSA 93 (121)
T ss_dssp HHHHHHHHHHSCCSEEEECSCCSS-----------------SCHHHHHHHHHHTT--CCSCEEEEESCCCHHHHHHHHHT
T ss_pred HHHHHHHHhccCCCEEEEecCCCC-----------------CCHHHHHHHHHhcC--CCCCEEEEecCCCHHHHHHHHHc
Confidence 355566666667777777665431 12345566666543 26899999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 94 g~~~~l~ 100 (121)
T 2pl1_A 94 GADDYVT 100 (121)
T ss_dssp TCSEEEE
T ss_pred CccceEE
Confidence 9998765
No 296
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=76.91 E-value=6.1 Score=35.47 Aligned_cols=123 Identities=10% Similarity=0.114 Sum_probs=65.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+.+. |...+ .... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 46 ~~li~~li~~Gv~Gl~v~-GtTGE-~~~L---------s~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~~ai~la~~A 113 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPV-GTTGE-SPTL---------THEEHKRIIELCVEQVAK-RVPVVAGAGSNSTSEAVELAKHA 113 (315)
T ss_dssp HHHHHHHHHTTCSEEECS-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-ccccC-cccc---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 457788888999988765 33110 0000 000012455556666543 68988865544444433 45
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 114 ~~~Gadavlv~~P~y~~~~~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 173 (315)
T 3si9_A 114 EKAGADAVLVVTPYYNRPNQRGLYT-HFSSIAKAISIP-IIIYN---IPSRSVIDMAVETMRDLC 173 (315)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHcCCCC-EEEEe---CchhhCCCCCHHHHHHHH
Confidence 569999999999998643 111222 333444444433 23443 244334455555555554
No 297
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=76.83 E-value=18 Score=31.78 Aligned_cols=173 Identities=17% Similarity=0.085 Sum_probs=89.3
Q ss_pred CCccceecCCCCCCCCcH----HHHHHHHhCCceEEecC--------CCCCC-HHHHHHHHHHHHhhcCCcEEeeeecCC
Q 022271 8 GFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRA--------PDWEA-PDYLRDLIRKTRSLTERPFGVGVVLAF 74 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~--------~~~~~-~~~l~~~i~~~r~~~~~P~gvnl~~~~ 74 (300)
|-+.|+|-|... -+-+. +++.++.++|.=-+..- .+|.. .++-.+.+++.++.++.|+..-.+-..
T Consensus 35 G~~~~~vIAgpc-~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~ 113 (276)
T 1vs1_A 35 GGGSKAVIAGPC-SVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPR 113 (276)
T ss_dssp BTTBCEEEEECS-BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGG
T ss_pred CCCCeEEEEecC-CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHH
Confidence 333455555544 24444 56666677775333211 00111 122334555555556777765443221
Q ss_pred -------------------CcHHHHHHHHHcCCcEEEEcCCC-CcHH---HHHHHHHCCC---eEee-c---c-C-----
Q 022271 75 -------------------PHNENIKAILSEKVAVLQVSWGE-YSEE---LVLEAHSAGV---KVVP-Q---D-G----- 118 (300)
Q Consensus 75 -------------------~~~~~~~~~~e~g~~~i~~~~G~-~~~~---~v~~~~~~G~---~v~~-~---~-~----- 118 (300)
.+.+.++.+...+-+++...... .+.+ .++.++..|- .+.+ . . +
T Consensus 114 ~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~ 193 (276)
T 1vs1_A 114 HVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFT 193 (276)
T ss_dssp GHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSB
T ss_pred HHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcch
Confidence 12445666666677776554221 1233 3444555553 3433 1 1 1
Q ss_pred -hhchHHHHHHhhCCCCCcEEEc-c---CCCC--hHHHHHHHHCCCcEEEecccccc------CcccCCCHHHHHHHHc
Q 022271 119 -LISLLPMVVDLIGDRDIPIIAA-G---GIVD--ARGYVAALSLGAQGICLGTRFVA------SEESYAHPEYKRKLVE 184 (300)
Q Consensus 119 -~~~ll~~v~~~~~~~~iPViaa-G---GI~~--g~~v~aal~lGAdgV~~GT~fl~------t~Es~~~~~~k~~i~~ 184 (300)
.+..++.+++.. ++||+.. . |..+ ..-..++.++||+|+++=+.|-. ..-|-.++.+++.+.+
T Consensus 194 vdl~~i~~lk~~~---~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~ 269 (276)
T 1vs1_A 194 LDVAAVAVLKEAT---HLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGE 269 (276)
T ss_dssp CBHHHHHHHHHHB---SSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHH
T ss_pred hCHHHHHHHHHHh---CCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHH
Confidence 234577777765 6898762 2 3332 23356778999999999887722 2233344556665543
No 298
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=76.64 E-value=24 Score=34.75 Aligned_cols=85 Identities=20% Similarity=0.100 Sum_probs=47.2
Q ss_pred HHHHHHHcCCcEEEEcCCCCcHHHHHHHH---------HCCCeEeec-cChhchHHHHHHhhCCCCCcEEE--------c
Q 022271 79 NIKAILSEKVAVLQVSWGEYSEELVLEAH---------SAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIA--------A 140 (300)
Q Consensus 79 ~~~~~~e~g~~~i~~~~G~~~~~~v~~~~---------~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPVia--------a 140 (300)
.++.+.++|.+.|.+++++. .++.++- +.|..+... .-.+..+..|++++. .+.||.. .
T Consensus 146 aA~~a~~aGfd~veih~~~g--yl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG-~~~~v~vrls~~~~~~ 222 (671)
T 1ps9_A 146 CAQLAREAGYDGVEVMGSEG--YLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVG-NDFIIIYRLSMLDLVE 222 (671)
T ss_dssp HHHHHHHTTCSEEEEEECBT--SHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEEECCST
T ss_pred HHHHHHHcCCCEEEEccccc--hHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcC-CCceEEEEECccccCC
Confidence 45566788999999987652 2333321 123221100 113455666666663 2678865 4
Q ss_pred cCCCCh--HHHHHHH-HCCCcEEEecccc
Q 022271 141 GGIVDA--RGYVAAL-SLGAQGICLGTRF 166 (300)
Q Consensus 141 GGI~~g--~~v~aal-~lGAdgV~~GT~f 166 (300)
||.... ..+++.+ ..|+|.+-++.++
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~ 251 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGW 251 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECB
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCc
Confidence 565322 2333444 4899999987544
No 299
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=76.61 E-value=4.8 Score=33.51 Aligned_cols=58 Identities=12% Similarity=-0.027 Sum_probs=39.2
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChH-HHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHcC
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDAR-GYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVEM 185 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~-~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a 185 (300)
+.++.++++.+ +.|+.+.+.|.|.. .+..++.+|||+|++..--. .......+.+.+.
T Consensus 50 ~~~i~~i~~~~---~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~-----~~~~~~~~~~~~~ 108 (220)
T 2fli_A 50 ADVVASMRKHS---KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST-----RHIHGALQKIKAA 108 (220)
T ss_dssp HHHHHHHHTTC---CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC-----SCHHHHHHHHHHT
T ss_pred HHHHHHHHHhC---CCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc-----ccHHHHHHHHHHc
Confidence 34555555544 68999999999986 57888889999999975321 2234455555543
No 300
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=76.45 E-value=5.9 Score=35.04 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+... |...+ ... + ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 25 ~~lv~~li~~Gv~gl~~~-GttGE-~~~-L--------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a 92 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAV-GTTGE-AST-L--------SMEEHTQVIKEIIRVANK-RIPIIAGTGANSTREAIELTKAA 92 (291)
T ss_dssp HHHHHHHHHHTCCEEEES-STTTT-GGG-S--------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEC-ccccc-ccc-C--------CHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHHH
Confidence 466778888899988765 33110 000 0 000012455556666643 68998865544444433 44
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.-+ .++. .|++.+.-+..+.+.++.
T Consensus 93 ~~~Gadavlv~~P~y~~~~~~~l~~-~f~~ia~a~~lPi-ilYn---~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 93 KDLGADAALLVTPYYNKPTQEGLYQ-HYKAIAEAVELPL-ILYN---VPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHCCSCE-EEEE---CHHHHSCCCCHHHHHHHT
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHH-HHHHHHHhcCCCE-EEEe---cccccCCCCCHHHHHHHH
Confidence 568999999999998742 111222 3334444444332 3443 244334455555555543
No 301
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=76.23 E-value=12 Score=28.71 Aligned_cols=42 Identities=14% Similarity=0.183 Sum_probs=34.7
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
-+.++.++++.. .++|||+-.+-.+...+..++.+||+++..
T Consensus 98 g~~~~~~lr~~~--~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 139 (157)
T 3hzh_A 98 GITCLSNIMEFD--KNARVIMISALGKEQLVKDCLIKGAKTFIV 139 (157)
T ss_dssp HHHHHHHHHHHC--TTCCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhhC--CCCcEEEEeccCcHHHHHHHHHcCCCEEEe
Confidence 456777777654 279999999999999999999999998754
No 302
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=76.20 E-value=19 Score=32.98 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=42.5
Q ss_pred HHHHHCCCeEeec-cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 104 LEAHSAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 104 ~~~~~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+.+.+.|+ .+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++....+..
T Consensus 210 ~~l~~~~i-~iEqP~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GG 273 (378)
T 3eez_A 210 RATEDLHV-MFEQPGETLDDIAAIRPLH---SAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGG 273 (378)
T ss_dssp HHTGGGTC-CEECCSSSHHHHHHTGGGC---CCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTS
T ss_pred HHhccCCe-EEecCCCCHHHHHHHHhhC---CCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCC
Confidence 33444555 4433 12333445555554 79999999999999999999986 7999997665543
No 303
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=76.19 E-value=8.9 Score=28.11 Aligned_cols=68 Identities=12% Similarity=0.126 Sum_probs=46.5
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ...+.++.++++.. .++|||+-.+-.+......++..
T Consensus 40 ~~~a~~~l~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~t~~~~~~~~~~~~~~ 100 (130)
T 3eod_A 40 GVDALELLGGFTPDLMICDIAMPR-----------------MNGLKLLEHIRNRG--DQTPVLVISATENMADIAKALRL 100 (130)
T ss_dssp HHHHHHHHTTCCCSEEEECCC----------------------CHHHHHHHHHTT--CCCCEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEecCCCC-----------------CCHHHHHHHHHhcC--CCCCEEEEEcCCCHHHHHHHHHc
Confidence 355556666666777777654321 12356666676643 27899999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 101 g~~~~l~ 107 (130)
T 3eod_A 101 GVEDVLL 107 (130)
T ss_dssp CCSEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 304
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=76.18 E-value=17 Score=26.78 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=47.4
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+...+..++..|
T Consensus 39 ~~al~~~~~~~~dlvilD~~lp~-----------------~~g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~g 99 (133)
T 3b2n_A 39 LDAMKLIEEYNPNVVILDIEMPG-----------------MTGLEVLAEIRKKH--LNIKVIIVTTFKRPGYFEKAVVND 99 (133)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSS-----------------SCHHHHHHHHHHTT--CSCEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHHHHHhhcCCCEEEEecCCCC-----------------CCHHHHHHHHHHHC--CCCcEEEEecCCCHHHHHHHHHcC
Confidence 45556666667777777655431 12345666666543 269999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 100 a~~~l~ 105 (133)
T 3b2n_A 100 VDAYVL 105 (133)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 998764
No 305
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=76.09 E-value=41 Score=29.71 Aligned_cols=58 Identities=21% Similarity=0.233 Sum_probs=45.2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHH-HHHHHHCCCcEEEeccccccCcccCCCHHHHHHHH
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARG-YVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 183 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~ 183 (300)
.+.+|.++.+.+ ++|++.=||=+.+.+ +.+++.+|..-|-++|-+... .....|+.+.
T Consensus 194 d~~~L~~I~~~v---~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a----~~~~~r~~~~ 252 (288)
T 3q94_A 194 GFAEMEQVRDFT---GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIE----FTKAVREVLN 252 (288)
T ss_dssp CHHHHHHHHHHH---CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHH----HHHHHHHHHH
T ss_pred CHHHHHHHHHhc---CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHH----HHHHHHHHHH
Confidence 466889999988 799999999887765 889999999999999887654 2344555444
No 306
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=75.99 E-value=10 Score=28.96 Aligned_cols=70 Identities=17% Similarity=0.107 Sum_probs=47.4
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++..+++.-...++|||+-.+-.+...+..++.+
T Consensus 40 ~~~al~~l~~~~~dlii~D~~l~~-----------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ 102 (154)
T 3gt7_A 40 GREAVRFLSLTRPDLIISDVLMPE-----------------MDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLEC 102 (154)
T ss_dssp HHHHHHHHTTCCCSEEEEESCCSS-----------------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHC
Confidence 345556665666777776654431 123455666665421127999999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 103 g~~~~l~ 109 (154)
T 3gt7_A 103 GADDFIT 109 (154)
T ss_dssp CCSEEEE
T ss_pred CCCEEEe
Confidence 9998654
No 307
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=75.77 E-value=9 Score=28.57 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=51.3
Q ss_pred eeecCCCcHHHHHHHHH-cCCcEEEEcCCCC-cHHHHHHHHHCCCeEeeccChhchHHHHHH--hhCCCCCcEEEccCCC
Q 022271 69 GVVLAFPHNENIKAILS-EKVAVLQVSWGEY-SEELVLEAHSAGVKVVPQDGLISLLPMVVD--LIGDRDIPIIAAGGIV 144 (300)
Q Consensus 69 nl~~~~~~~~~~~~~~e-~g~~~i~~~~G~~-~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~--~~~~~~iPViaaGGI~ 144 (300)
++.......+.++.+.+ ..+++|.+....| .. .-+.++.++++ .. .++|||+-.+-.
T Consensus 31 ~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~-----------------~g~~~~~~l~~~~~~--~~~~ii~ls~~~ 91 (140)
T 3lua_A 31 DFIEVENLKKFYSIFKDLDSITLIIMDIAFPVEK-----------------EGLEVLSAIRNNSRT--ANTPVIIATKSD 91 (140)
T ss_dssp EEEEECSHHHHHTTTTTCCCCSEEEECSCSSSHH-----------------HHHHHHHHHHHSGGG--TTCCEEEEESCC
T ss_pred cEEEECCHHHHHHHHhcCCCCcEEEEeCCCCCCC-----------------cHHHHHHHHHhCccc--CCCCEEEEeCCC
Confidence 33333333555666666 6777777776553 21 13456666766 33 279999999999
Q ss_pred ChHHHHHHHHCCCcEEEe
Q 022271 145 DARGYVAALSLGAQGICL 162 (300)
Q Consensus 145 ~g~~v~aal~lGAdgV~~ 162 (300)
+...+..++.+||+++..
T Consensus 92 ~~~~~~~~~~~g~~~~l~ 109 (140)
T 3lua_A 92 NPGYRHAALKFKVSDYIL 109 (140)
T ss_dssp CHHHHHHHHHSCCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 999999999999998754
No 308
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=75.74 E-value=13 Score=27.38 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=47.0
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ...+.++.++++.. .++|||+-.+-.+.+....++.+
T Consensus 40 ~~~a~~~l~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~ 100 (137)
T 3hdg_A 40 GEEGERLFGLHAPDVIITDIRMPK-----------------LGGLEMLDRIKAGG--AKPYVIVISAFSEMKYFIKAIEL 100 (137)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCSS-----------------SCHHHHHHHHHHTT--CCCEEEECCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEeCCCCC-----------------CCHHHHHHHHHhcC--CCCcEEEEecCcChHHHHHHHhC
Confidence 345555566666777766654431 12355666666643 37999999999999999999999
Q ss_pred CCcEEE
Q 022271 156 GAQGIC 161 (300)
Q Consensus 156 GAdgV~ 161 (300)
||+++.
T Consensus 101 g~~~~l 106 (137)
T 3hdg_A 101 GVHLFL 106 (137)
T ss_dssp CCSEEC
T ss_pred CcceeE
Confidence 999864
No 309
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=75.70 E-value=4.2 Score=37.26 Aligned_cols=62 Identities=11% Similarity=0.039 Sum_probs=43.9
Q ss_pred HHHHHCCCeEeecc-ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 104 LEAHSAGVKVVPQD-GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 104 ~~~~~~G~~v~~~~-~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+.+.+.|+ .+.+. ..+..+.++++.+ ++||++.+.+.+.+++..++..| +|.|++-...+..
T Consensus 210 ~~l~~~~i-~iE~P~~~~~~~~~l~~~~---~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GG 273 (379)
T 2rdx_A 210 RATRDLDY-ILEQPCRSYEECQQVRRVA---DQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGG 273 (379)
T ss_dssp HHTTTSCC-EEECCSSSHHHHHHHHTTC---CSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTS
T ss_pred HHHHhCCe-EEeCCcCCHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCC
Confidence 33445566 55431 1345556666655 79999999999999999999875 8999997555443
No 310
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=75.62 E-value=6.3 Score=33.66 Aligned_cols=49 Identities=24% Similarity=0.266 Sum_probs=34.0
Q ss_pred hhchHHHHHHhhCCCCCcEEE-----ccC---CCC--hHHHHHHHHCCCcEEEeccccccCc
Q 022271 119 LISLLPMVVDLIGDRDIPIIA-----AGG---IVD--ARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPVia-----aGG---I~~--g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
....+.++++.+ ++||++ -|| +-+ -+++.+++..|||.|.+++.....+
T Consensus 57 ~~~~i~~ir~~v---~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p 115 (229)
T 3q58_A 57 GIENLRTVRPHL---SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRSRP 115 (229)
T ss_dssp SHHHHHHHGGGC---CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCS
T ss_pred CHHHHHHHHHhc---CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccCCh
Confidence 345566777776 789873 122 333 3588899999999999988765443
No 311
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=75.60 E-value=14 Score=34.16 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=48.8
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 226 ~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~ 293 (404)
T 4e5t_A 226 RLARRLEAYDPLWFEEPIPPEKPEDMAEVARYT---SIPVATGERLCTKYEFSRVLETGAASILQMNLGRV 293 (404)
T ss_dssp HHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHC---SSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTS
T ss_pred HHHHHHhhcCCcEEECCCCcccHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHhCCCCEEecCcccc
Confidence 34456667788877651 2456677888876 79999999999999999999887 68888865444
No 312
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=75.44 E-value=6.5 Score=35.81 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=45.9
Q ss_pred HHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 103 VLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 103 v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 208 ~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 274 (370)
T 1nu5_A 208 IPRLEEAGVELVEQPVPRANFGALRRLTEQN---GVAILADESLSSLSSAFELARDHAVDAFSLKLCNMG 274 (370)
T ss_dssp HHHHHHHTCCEEECCSCTTCHHHHHHHHHHC---SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHhcCcceEeCCCCcccHHHHHHHHHhC---CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcC
Confidence 344445566655431 2455677777776 79999999999999999999986 799999654443
No 313
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=75.41 E-value=47 Score=29.98 Aligned_cols=159 Identities=14% Similarity=0.104 Sum_probs=82.6
Q ss_pred CCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCC
Q 022271 8 GFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFP 75 (300)
Q Consensus 8 g~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~ 75 (300)
|+ +|-+.-||.- .+.. .+++.-..++|.=|++.++. .++.++-.+.++.+.+.. +.|+-++.-....
T Consensus 34 Gv-~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st 112 (343)
T 2v9d_A 34 GI-IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNA 112 (343)
T ss_dssp EE-CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCH
T ss_pred Ce-EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH
Confidence 44 4444557741 1222 35666666788767665432 367888878888777654 3576555543321
Q ss_pred c--HHHHHHHHHcCCcEEEEcC-----------------------------------CC-CcHHHHHHHH-HCCCeEeec
Q 022271 76 H--NENIKAILSEKVAVLQVSW-----------------------------------GE-YSEELVLEAH-SAGVKVVPQ 116 (300)
Q Consensus 76 ~--~~~~~~~~e~g~~~i~~~~-----------------------------------G~-~~~~~v~~~~-~~G~~v~~~ 116 (300)
. .+..+.+.+.|++.+.+.. |. .+.+.+.++. +..-.+...
T Consensus 113 ~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiK 192 (343)
T 2v9d_A 113 RETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIK 192 (343)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEE
Confidence 1 2334445555666554321 11 1223333332 222111111
Q ss_pred --cChhchHHHHHHhhCC--CCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 --DGLISLLPMVVDLIGD--RDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 --~~~~~ll~~v~~~~~~--~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++++.... .+..| ..| +...+..++.+|++|++-|+..++.++
T Consensus 193 dssgd~~~~~~l~~~~~~~~~~f~v-~~G---~D~~~l~~l~~Ga~G~is~~anv~P~~ 247 (343)
T 2v9d_A 193 DTIDSVAHLRSMIHTVKGAHPHFTV-LCG---YDDHLFNTLLLGGDGAISASGNFAPQV 247 (343)
T ss_dssp ECCSCHHHHHHHHHHHHHHCTTCEE-EES---SGGGHHHHHHTTCCEECCGGGTTCHHH
T ss_pred eCCCCHHHHHHHHHhcCCCCCCEEE-EEC---cHHHHHHHHHCCCCEEEeCHHHhHHHH
Confidence 1233344444443310 13444 344 334578899999999999999887654
No 314
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=75.40 E-value=7.1 Score=35.71 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=49.0
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCC-hHHHHHHHHCC-CcEEEeccccccC
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVD-ARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~-g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
++.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+ ..++..++..| +|.|++-...+..
T Consensus 218 ~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 288 (382)
T 1rvk_A 218 ALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNL---DIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGG 288 (382)
T ss_dssp HHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHC---SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTS
T ss_pred HHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhC---CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCC
Confidence 34455566777776541 2456677787776 799999999999 99999999986 7999996555443
No 315
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=75.35 E-value=5.3 Score=36.81 Aligned_cols=64 Identities=13% Similarity=0.077 Sum_probs=46.4
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 213 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 280 (391)
T 2qgy_A 213 FLKEVSSFNPYWIEEPVDGENISLLTEIKNTF---NMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMG 280 (391)
T ss_dssp HHHHHGGGCCSEEECSSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSS
T ss_pred HHHHHHhcCCCeEeCCCChhhHHHHHHHHhhC---CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhC
Confidence 344445566666543 12456677787776 79999999999999999999986 789988654443
No 316
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=75.32 E-value=6.9 Score=34.74 Aligned_cols=123 Identities=11% Similarity=0.096 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v~---aa 152 (300)
...++.+++.|++.+... |..- +.... ...--..++..+++.+++ ++|||+.=|= ++.+.+. .+
T Consensus 24 ~~lv~~li~~Gv~gi~v~-GttG-E~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A 91 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPV-GTTG-ESPTL---------TEEEHKRVVALVAEQAQG-RVPVIAGAGSNNPVEAVRYAQHA 91 (297)
T ss_dssp HHHHHHHHHTTCSEEECS-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-chhhC---------CHHHHHHHHHHHHHHhCC-CCeEEEccCCCCHHHHHHHHHHH
Confidence 456777788888887764 3210 00000 000012455556666543 6898765554 4444432 34
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-..| +.|.++.+.-+ .++. .|++.+.-+....+.++.
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f-~~va~a~~lPi-ilYn---~P~~tg~~l~~~~~~~La 151 (297)
T 2rfg_A 92 QQAGADAVLCVAGYYNRPSQEGLYQHF-KMVHDAIDIPI-IVYN---IPPRAVVDIKPETMARLA 151 (297)
T ss_dssp HHHTCSEEEECCCTTTCCCHHHHHHHH-HHHHHHCSSCE-EEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHH-HHHHHhcCCCE-EEEe---CccccCCCCCHHHHHHHH
Confidence 558999999999998643 11122223 34444444332 3443 233333445555555543
No 317
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=75.30 E-value=42 Score=29.40 Aligned_cols=141 Identities=14% Similarity=0.131 Sum_probs=73.6
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5555556678777765432 367888778888777653 35765555432211 2334444455666654421
Q ss_pred --CCC-cHHHHHHHH----HCCCeEeec------------------------------cChhchHHHHHHhhCCCCCcEE
Q 022271 96 --GEY-SEELVLEAH----SAGVKVVPQ------------------------------DGLISLLPMVVDLIGDRDIPII 138 (300)
Q Consensus 96 --G~~-~~~~v~~~~----~~G~~v~~~------------------------------~~~~~ll~~v~~~~~~~~iPVi 138 (300)
..| .+.+++..+ ..++.++.- .+.+.-+.++++... .+..|
T Consensus 106 ~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd~~~~~~~~~~~~-~~f~v- 183 (292)
T 2ojp_A 106 YYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIXEATGNLTRVNQIKELVS-DDFVL- 183 (292)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTSTTEEEC-CCSCCTHHHHHHHTTSC-TTSBC-
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHhcC-CCEEE-
Confidence 111 122222221 123333211 122333444444331 13333
Q ss_pred EccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 139 AAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 139 aaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
..| +...+..++.+|++|++-|+..+++++
T Consensus 184 ~~G---~d~~~~~~l~~G~~G~is~~~n~~P~~ 213 (292)
T 2ojp_A 184 LSG---DDASALDFMQYGGHGVISVTANVAARD 213 (292)
T ss_dssp EES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred EEC---cHHHHHHHHHCCCcEEEeCHHHhhHHH
Confidence 333 234577889999999999999887654
No 318
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=75.10 E-value=23 Score=31.91 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCCC---cHHHHHHHHHc-CCcE-E--EEcCCCCcH---HHHHHHHHCCCeEee
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAFP---HNENIKAILSE-KVAV-L--QVSWGEYSE---ELVLEAHSAGVKVVP 115 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~---~~~~~~~~~e~-g~~~-i--~~~~G~~~~---~~v~~~~~~G~~v~~ 115 (300)
.+++++.++.++..+.. --.+++-.... +.+.++.+.+. ++++ + ..+.+-.++ .+.+.+.+.|+..+.
T Consensus 138 ~~~~~~~~~a~~~~~~G--~~~~K~K~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE 215 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLG--FDTLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVE 215 (354)
T ss_dssp CCHHHHHHHHHHHHHTT--CSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEE
T ss_pred CCHHHHHHHHHHHHHhC--CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 46777766666655431 12333322222 12344444442 4432 1 223232233 234445556777765
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+. ..+..+.++++.+ ++||.+.+.+.+..++..++..| +|.|++-...+..
T Consensus 216 qP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG 270 (354)
T 3jva_A 216 QPVKRRDLEGLKYVTSQV---NTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGG 270 (354)
T ss_dssp CCSCTTCHHHHHHHHHHC---SSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred CCCChhhHHHHHHHHHhC---CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCC
Confidence 41 2455677777776 79999999999999999999875 6999997555443
No 319
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=75.03 E-value=43 Score=29.44 Aligned_cols=142 Identities=14% Similarity=0.078 Sum_probs=77.7
Q ss_pred HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC
Q 022271 25 PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW 95 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~ 95 (300)
.+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 35666666788777775542 367888778888777653 35665555433211 3345556666777765531
Q ss_pred ---CCCc-HHHHHHH----HHCCCeEeec------------------------------cChhchHHHHHHhhCCCCCcE
Q 022271 96 ---GEYS-EELVLEA----HSAGVKVVPQ------------------------------DGLISLLPMVVDLIGDRDIPI 137 (300)
Q Consensus 96 ---G~~~-~~~v~~~----~~~G~~v~~~------------------------------~~~~~ll~~v~~~~~~~~iPV 137 (300)
..|+ +.+++.. ...++.++.- .+.+..+.++++... .+..|
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds~gd~~~~~~~~~~~~-~~f~v 182 (297)
T 2rfg_A 104 GYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDATTDLARISRERMLIN-KPFSF 182 (297)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCCTTHHHHHHTTCC-SCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHhcC-CCEEE
Confidence 1111 2222221 1234443321 123334444444331 13333
Q ss_pred EEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 138 IAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 138 iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+| +...+..++.+|++|++-|+..+++++
T Consensus 183 -~~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 212 (297)
T 2rfg_A 183 -LSG---DDMTAIAYNASGGQGCISVSANIAPAL 212 (297)
T ss_dssp -EES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred -EeC---cHHHHHHHHHCCCCEEEecHHHhhHHH
Confidence 344 234577899999999999999887654
No 320
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=74.98 E-value=15 Score=33.79 Aligned_cols=63 Identities=6% Similarity=-0.018 Sum_probs=46.2
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHH-HhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVV-DLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~-~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+. ..+..+.+++ +.+ ++||++.+.+.+..++..++..| +|.|++-...+
T Consensus 214 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~---~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~ 281 (389)
T 3ozy_A 214 MLRILDEAGCYWFEEPLSIDDIEGHRILRAQGT---PVRIATGENLYTRNAFNDYIRNDAIDVLQADASRA 281 (389)
T ss_dssp HHHHHHHTTCSEEESCSCTTCHHHHHHHHTTCC---SSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTS
T ss_pred HHHHHHhcCCCEEECCCCcccHHHHHHHHhcCC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 4455666777777541 1345566777 655 79999999999999999999875 78998865444
No 321
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=74.81 E-value=3.6 Score=37.78 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=95.1
Q ss_pred cccC--CccceecCCCCCCCCcH-------HHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCC
Q 022271 5 GMLG--FEYGIVQAPLGPDISGP-------ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFP 75 (300)
Q Consensus 5 ~~lg--~~~Pii~apM~~g~s~~-------~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~ 75 (300)
+++| ++.|++.+||+ .+.. .|+.++.++|...+++.....+ ++++.+....|..++|.....
T Consensus 64 ~i~G~~~~~Pi~iAPmg--~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~-------ieev~~~~~~~~~~QLy~~~d 134 (370)
T 1gox_A 64 TILGFKISMPIMIAPTA--MQKMAHPEGEYATARAASAAGTIMTLSSWATSS-------VEEVASTGPGIRFFQLYVYKD 134 (370)
T ss_dssp EETTEEESSSEEECCCS--CGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC-------HHHHHTTCCCCEEEEECCBSS
T ss_pred EECCcccCCceeEcccc--hhhhccchHHHHHHHHHHHcCCCeeccCCCCCC-------HHHHHhhcCCCceEEEecCCC
Confidence 4556 57899999995 4432 4999999999888876532122 334444434788899875433
Q ss_pred c---HHHHHHHHHcCCcEEEEcCCCCcH-HHHHHHHHC------------------------CCeE---e---ec-cChh
Q 022271 76 H---NENIKAILSEKVAVLQVSWGEYSE-ELVLEAHSA------------------------GVKV---V---PQ-DGLI 120 (300)
Q Consensus 76 ~---~~~~~~~~e~g~~~i~~~~G~~~~-~~v~~~~~~------------------------G~~v---~---~~-~~~~ 120 (300)
. .+.++.+.+.|++.+.++.++|.. .-...+++. |... + .. ...+
T Consensus 135 ~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~ 214 (370)
T 1gox_A 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSW 214 (370)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCH
T ss_pred chHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchH
Confidence 2 456778888999999998876521 001111110 1000 0 00 1123
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
..+.++++.. ++||+. +|+.+.+++..+..+|||+|.++..
T Consensus 215 ~~i~~l~~~~---~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~~ 255 (370)
T 1gox_A 215 KDVAWLQTIT---SLPILV-KGVITAEDARLAVQHGAAGIIVSNH 255 (370)
T ss_dssp HHHHHHHHHC---CSCEEE-ECCCSHHHHHHHHHTTCSEEEECCG
T ss_pred HHHHHHHHHh---CCCEEE-EecCCHHHHHHHHHcCCCEEEECCC
Confidence 4566666665 799986 7789999999999999999999653
No 322
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=74.71 E-value=12 Score=31.51 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=49.1
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+...+..++.+
T Consensus 56 ~~~al~~~~~~~~dlvllD~~lp~-----------------~~g~~~~~~lr~~~--~~~~ii~lt~~~~~~~~~~~~~~ 116 (250)
T 3r0j_A 56 GAQALDRARETRPDAVILDVXMPG-----------------MDGFGVLRRLRADG--IDAPALFLTARDSLQDKIAGLTL 116 (250)
T ss_dssp HHHHHHHHHHHCCSEEEEESCCSS-----------------SCHHHHHHHHHHTT--CCCCEEEEECSTTHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhcC--CCCCEEEEECCCCHHHHHHHHHc
Confidence 355566666667777777665432 12356666776643 26899999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 117 Ga~~yl~ 123 (250)
T 3r0j_A 117 GGDDYVT 123 (250)
T ss_dssp TTCEEEE
T ss_pred CCcEEEe
Confidence 9998765
No 323
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=74.55 E-value=46 Score=29.55 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=85.5
Q ss_pred cceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--
Q 022271 11 YGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH-- 76 (300)
Q Consensus 11 ~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~-- 76 (300)
+|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-++.++.+.+.. +.|+-++.-.....
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~ea 107 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREA 107 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHH
Confidence 4555558731 1222 35555566778777775532 367888778888776654 35766655443221
Q ss_pred HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHH----HHCCCeEeec------------------------------cC
Q 022271 77 NENIKAILSEKVAVLQVSW---GEYS-EELVLEA----HSAGVKVVPQ------------------------------DG 118 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~----~~~G~~v~~~------------------------------~~ 118 (300)
.+..+.+.+.|++.+.+.. ..|. +.+++.. ...++.++.- .+
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssg 187 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEATG 187 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEcCCC
Confidence 3455666667777765421 1111 2222221 1234444321 12
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+..+.++.+... .+..| ..|. ...+..++.+|++|++-++..++.++
T Consensus 188 d~~~~~~~~~~~~-~~f~v-~~G~---d~~~l~~l~~Ga~G~is~~an~~P~~ 235 (314)
T 3qze_A 188 DLQRAKEVIERVG-KDFLV-YSGD---DATAVELMLLGGKGNISVTANVAPRA 235 (314)
T ss_dssp CHHHHHHHHHHSC-TTSEE-EESC---GGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred CHHHHHHHHHHcC-CCeEE-EecC---hHHHHHHHHCCCCEEEecHHhhhHHH
Confidence 3444555555442 13444 3443 23578899999999999999887755
No 324
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=74.53 E-value=3.6 Score=37.90 Aligned_cols=62 Identities=15% Similarity=-0.001 Sum_probs=44.5
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+.+++..++..| +|.|++-...
T Consensus 227 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 292 (388)
T 2nql_A 227 LIAEMQPFDPWFAEAPVWTEDIAGLEKVSKNT---DVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH 292 (388)
T ss_dssp HHHHHGGGCCSCEECCSCTTCHHHHHHHHTSC---CSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH
T ss_pred HHHHHhhcCCCEEECCCChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC
Confidence 3344455666555431 1345666676665 79999999999999999999876 7999986544
No 325
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=74.51 E-value=17 Score=26.97 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=33.7
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.+.++.++++.. .++|||+-.+-.+...+..++..||+++..
T Consensus 64 g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~ 105 (143)
T 3jte_A 64 GMDILREIKKIT--PHMAVIILTGHGDLDNAILAMKEGAFEYLR 105 (143)
T ss_dssp HHHHHHHHHHHC--TTCEEEEEECTTCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHhC--CCCeEEEEECCCCHHHHHHHHHhCcceeEe
Confidence 356666676653 269999999999999999999999998755
No 326
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=74.47 E-value=22 Score=26.12 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=51.7
Q ss_pred eeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH
Q 022271 69 GVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG 148 (300)
Q Consensus 69 nl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~ 148 (300)
++.......+.++.+.+..+++|.+....+... .. ....+.++.++++.. .++|||+-.+-.+...
T Consensus 29 ~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~-~~-----------~~~g~~~~~~l~~~~--~~~~ii~ls~~~~~~~ 94 (140)
T 2qr3_A 29 KVITLSSPVSLSTVLREENPEVVLLDMNFTSGI-NN-----------GNEGLFWLHEIKRQY--RDLPVVLFTAYADIDL 94 (140)
T ss_dssp EEEEECCHHHHHHHHHHSCEEEEEEETTTTC-----------------CCHHHHHHHHHHHC--TTCCEEEEEEGGGHHH
T ss_pred EEEEeCCHHHHHHHHHcCCCCEEEEeCCcCCCC-CC-----------CccHHHHHHHHHhhC--cCCCEEEEECCCCHHH
Confidence 333333345666777777788887776543000 00 012345666666653 2789999999889999
Q ss_pred HHHHHHCCCcEEEe
Q 022271 149 YVAALSLGAQGICL 162 (300)
Q Consensus 149 v~aal~lGAdgV~~ 162 (300)
...++..||+++..
T Consensus 95 ~~~~~~~g~~~~l~ 108 (140)
T 2qr3_A 95 AVRGIKEGASDFVV 108 (140)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHcCchheee
Confidence 99999999998764
No 327
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=74.35 E-value=29 Score=34.54 Aligned_cols=83 Identities=17% Similarity=0.093 Sum_probs=48.2
Q ss_pred HHHHHHHcCCcEEEEcCCCCcHHHHHHHH---------HCCCeEeec-cChhchHHHHHHhhCCCCCcEEE---------
Q 022271 79 NIKAILSEKVAVLQVSWGEYSEELVLEAH---------SAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIA--------- 139 (300)
Q Consensus 79 ~~~~~~e~g~~~i~~~~G~~~~~~v~~~~---------~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPVia--------- 139 (300)
.++.+.++|.|.|.+++++- .++.++- +.|+.+-.. .-.+..+..|++++. .+.||..
T Consensus 154 aA~~a~~aGfDgVEih~a~g--yLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg-~~~pv~vrls~~~~~~ 230 (729)
T 1o94_A 154 AAKRSRDAGFDIVYVYGAHS--YLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVG-SDCAIATRFGVDTVYG 230 (729)
T ss_dssp HHHHHHHTTCSEEEEEECTT--CHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHT-TTSEEEEEEEEECSSC
T ss_pred HHHHHHHcCCCEEEEccccc--hHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhC-CCceEEEEEccccCcC
Confidence 45566778999999987652 2444431 234332110 013455666666663 2567664
Q ss_pred ccCCC---ChHHHHHHHHCCCcEEEecc
Q 022271 140 AGGIV---DARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 140 aGGI~---~g~~v~aal~lGAdgV~~GT 164 (300)
.||+. +...+++.+..|+|.+-+..
T Consensus 231 ~~G~~~~~~~~~~~~~l~~~~d~~~v~~ 258 (729)
T 1o94_A 231 PGQIEAEVDGQKFVEMADSLVDMWDITI 258 (729)
T ss_dssp TTSCCTTTHHHHHHHHHGGGCSEEEEEE
T ss_pred CCCCCchHHHHHHHHHHHhhcCEEEEee
Confidence 46776 34557777777899765543
No 328
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=74.33 E-value=40 Score=28.67 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=32.6
Q ss_pred hhchHHHHHHhhCC-CCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 119 LISLLPMVVDLIGD-RDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 119 ~~~ll~~v~~~~~~-~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
-+.++.++.+..+. ..-.-|.+..+.+..++.++..+|||.+-+.
T Consensus 143 G~~~v~~i~~~~~~~~~~T~IlaAS~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 143 GMQIIDMIRTIFNNYIIKTQILVASIRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp THHHHHHHHHHHHHTTCCSEEEEBSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHHHcCCCEEEeC
Confidence 34577777766531 1234566677999999999999999988774
No 329
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=74.26 E-value=2.8 Score=40.26 Aligned_cols=53 Identities=15% Similarity=0.387 Sum_probs=45.3
Q ss_pred ccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh
Q 022271 6 MLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL 61 (300)
Q Consensus 6 ~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~ 61 (300)
.+++.+|+++++|. .++..+|+.++++.|++|+|.. + .+++...+.+++++..
T Consensus 47 ~i~l~iP~vsa~m~-~vt~~~la~~la~~gg~G~I~~-~-~~~e~~~~~v~~V~~~ 99 (503)
T 1me8_A 47 EINLKIPLVSAIMQ-SVSGEKMAIALAREGGISFIFG-S-QSIESQAAMVHAVKNF 99 (503)
T ss_dssp SCEESSSEEECSCT-TTCSHHHHHHHHHTTCEEEECC-S-SCHHHHHHHHHHHHTT
T ss_pred ceeecCceEeccch-hhhHHHHHHHHHhCCCcceeeC-C-CCHHHHHHHHhhhhhc
Confidence 67889999999998 7999999999999999999986 3 5777777777777643
No 330
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=73.92 E-value=47 Score=29.32 Aligned_cols=154 Identities=19% Similarity=0.113 Sum_probs=84.4
Q ss_pred cceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--
Q 022271 11 YGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH-- 76 (300)
Q Consensus 11 ~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~-- 76 (300)
+|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-.....
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~a 100 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTS 100 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHH
Confidence 4444457731 1222 35666666788777765432 367888888888877654 35665555443221
Q ss_pred HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHH----HHCCCeEeec------------------------------cC
Q 022271 77 NENIKAILSEKVAVLQVSW---GEYS-EELVLEA----HSAGVKVVPQ------------------------------DG 118 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~----~~~G~~v~~~------------------------------~~ 118 (300)
.+..+.+.+.|++.+.+.. ..|+ +.+++.. ...++.++.- .+
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssg 180 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAVXDAKG 180 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECSC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecCCC
Confidence 3455666677777765421 1121 2222222 1234444321 12
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+..+.++.+.. +..| .+| +...+..++.+|++|++-|+..+++++
T Consensus 181 d~~~~~~~~~~~---~f~v-~~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 226 (304)
T 3cpr_A 181 DLVAATSLIKET---GLAW-YSG---DDPLNLVWLALGGSGFISVIGHAAPTA 226 (304)
T ss_dssp CHHHHHHHHHHH---CCEE-EEC---SGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred CHHHHHHHHHhc---CEEE-EEC---cHHHHHHHHHCCCCEEEecHHHhhHHH
Confidence 233344444433 3444 333 234577889999999999999987654
No 331
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=73.84 E-value=4.4 Score=31.13 Aligned_cols=39 Identities=26% Similarity=0.132 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEee
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP 115 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~ 115 (300)
.+.++.+.+.|++.|+++.|...+++.+.++++|+.++.
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPVI 110 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEEC
Confidence 356888899999999999888778899999999999874
No 332
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=73.80 E-value=5 Score=36.99 Aligned_cols=63 Identities=10% Similarity=-0.081 Sum_probs=45.6
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+++.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 226 ~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 292 (393)
T 2og9_A 226 MCRIFEPFNLVWIEEPLDAYDHEGHAALALQF---DTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRV 292 (393)
T ss_dssp HHHHHGGGCCSCEECCSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHhhCCCEEECCCCcccHHHHHHHHHhC---CCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCcccc
Confidence 344445566655543 12455677777776 79999999999999999999987 78998854433
No 333
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=73.80 E-value=48 Score=29.50 Aligned_cols=160 Identities=16% Similarity=0.135 Sum_probs=87.4
Q ss_pred cccccCCccceecCCCCCCCCcHHHHHHHHhCCceEEecC------------CCCCCHHHHHHHHHHHHhhcCCcEEeee
Q 022271 3 WRGMLGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRA------------PDWEAPDYLRDLIRKTRSLTERPFGVGV 70 (300)
Q Consensus 3 ~~~~lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~------------~~~~~~~~l~~~i~~~r~~~~~P~gvnl 70 (300)
|.+++.-.-||+. | ++-++-.|..+.++|.=.++.. .+..+.+++...++.+...++.|+-+.+
T Consensus 21 lr~l~~~~~~i~~-~---~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~ 96 (305)
T 3ih1_A 21 FRALVEANEILQI-P---GAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRATDLPVLVDI 96 (305)
T ss_dssp HHHHHHSSSCEEE-E---BCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred HHHHHhCCCcEEE-e---cCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 3344443445543 2 3455555666666664332211 1135677888888888777777876665
Q ss_pred ecCCCc----HHHHHHHHHcCCcEEEEcCCC--------------CcHHHHHHH---HH---------------------
Q 022271 71 VLAFPH----NENIKAILSEKVAVLQVSWGE--------------YSEELVLEA---HS--------------------- 108 (300)
Q Consensus 71 ~~~~~~----~~~~~~~~e~g~~~i~~~~G~--------------~~~~~v~~~---~~--------------------- 108 (300)
-.-+.. .+.++.+.+.|+..|.+=-+. |..+.++++ ++
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDE 176 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHH
Confidence 433222 234556666777777542111 112333332 22
Q ss_pred ----------CCCeEeec--cChhchHHHHHHhhCCCCCcEEE---ccCCCChHHHHHHHHCCCcEEEeccccccC
Q 022271 109 ----------AGVKVVPQ--DGLISLLPMVVDLIGDRDIPIIA---AGGIVDARGYVAALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 109 ----------~G~~v~~~--~~~~~ll~~v~~~~~~~~iPVia---aGGI~~g~~v~aal~lGAdgV~~GT~fl~t 169 (300)
+|+..+.. ......+.++.+.+ ++|+++ .+|-...-...+.-.+|..-|..|...+.+
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~---~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEALQSEEEFRLFNSKV---NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS---CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc---CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 33332222 22446677777777 688874 355433344666777899999998766654
No 334
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=73.72 E-value=32 Score=31.49 Aligned_cols=119 Identities=13% Similarity=0.024 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecCCC----cHHHHHHHHHc-CCcE---EEEcCCCCcH---HHHHHHHHCCCeE
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLAFP----HNENIKAILSE-KVAV---LQVSWGEYSE---ELVLEAHSAGVKV 113 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~----~~~~~~~~~e~-g~~~---i~~~~G~~~~---~~v~~~~~~G~~v 113 (300)
+.+++++.+..++..+.. +--.+++-.... +.+.++.+.+. |+++ +..+.+-.+. .+.+.+.+.|+..
T Consensus 165 ~~~~e~~~~~a~~~~~~~-G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~ 243 (383)
T 3toy_A 165 VLDARDDERTLRTACDEH-GFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTW 243 (383)
T ss_dssp SCCHHHHHHHHHHHHHTS-CCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSE
T ss_pred CCCHHHHHHHHHHHHHcc-CCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCE
Confidence 468888888877776541 122344433221 23445555553 5543 2233332233 4556667788888
Q ss_pred eecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 114 VPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 114 ~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+. ..+..+.++++.+ ++||.+...+.+..++..++..| +|.|++--..+
T Consensus 244 iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~ 298 (383)
T 3toy_A 244 IEEPVPQENLSGHAAVRERS---EIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKV 298 (383)
T ss_dssp EECCSCTTCHHHHHHHHHHC---SSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTT
T ss_pred EECCCCcchHHHHHHHHhhc---CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 7651 2456677888776 79999999999999999999876 68888765443
No 335
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=73.46 E-value=42 Score=30.38 Aligned_cols=119 Identities=15% Similarity=0.117 Sum_probs=72.2
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecC-CCc---HHHHHHHHHc-CCc--EE-EEcCCCCcHH---HHHHHHHCCCeE
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLA-FPH---NENIKAILSE-KVA--VL-QVSWGEYSEE---LVLEAHSAGVKV 113 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~-~~~---~~~~~~~~e~-g~~--~i-~~~~G~~~~~---~v~~~~~~G~~v 113 (300)
+.+++++.+..++..+..+ --.+++-.. .+. .+.++.+.+. |++ +. ..+.+-.+.+ +.+.+.+.|+..
T Consensus 137 ~~~~~~~~~~a~~~~~~~G-~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~ 215 (367)
T 3dg3_A 137 FDDPVKMVAEAERIRETYG-INTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLF 215 (367)
T ss_dssp SSCHHHHHHHHHHHHHHHC-CCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSC
T ss_pred CCCHHHHHHHHHHHHHhcC-ccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCE
Confidence 3578888777777655411 123343322 222 3345555442 333 32 2333332333 345555678777
Q ss_pred eecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 114 VPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 114 ~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+. ..+..+.++++.+ ++||.+.+.+.+..++..++..| +|.|++=...+
T Consensus 216 iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 216 AEELCPADDVLSRRRLVGQL---DMPFIADESVPTPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp EESCSCTTSHHHHHHHHHHC---SSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH
T ss_pred EECCCCcccHHHHHHHHHhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh
Confidence 7651 2355677787776 79999999999999999999986 79999864443
No 336
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.37 E-value=18 Score=26.92 Aligned_cols=68 Identities=13% Similarity=-0.008 Sum_probs=46.5
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++.++++.. ..+|||.-.+-.+......++..
T Consensus 37 ~~~a~~~l~~~~~dlvllD~~l~~-----------------~~g~~l~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~ 97 (137)
T 3cfy_A 37 GRDAIQFIERSKPQLIILDLKLPD-----------------MSGEDVLDWINQND--IPTSVIIATAHGSVDLAVNLIQK 97 (137)
T ss_dssp HHHHHHHHHHHCCSEEEECSBCSS-----------------SBHHHHHHHHHHTT--CCCEEEEEESSCCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCEEEEecCCCC-----------------CCHHHHHHHHHhcC--CCCCEEEEEecCcHHHHHHHHHC
Confidence 355566666666777776654431 12245556666542 26899999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 98 ga~~~l~ 104 (137)
T 3cfy_A 98 GAEDFLE 104 (137)
T ss_dssp TCSEEEE
T ss_pred CccEEEe
Confidence 9998654
No 337
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=73.18 E-value=13 Score=27.48 Aligned_cols=43 Identities=21% Similarity=0.268 Sum_probs=33.8
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.+.++.++++.- ..++|||+-.+-.+.+....++..||+++..
T Consensus 67 g~~~~~~l~~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (136)
T 3hdv_A 67 GLDLIRTIRASE-RAALSIIVVSGDTDVEEAVDVMHLGVVDFLL 109 (136)
T ss_dssp HHHHHHHHHTST-TTTCEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcC-CCCCCEEEEeCCCChHHHHHHHhCCcceEEe
Confidence 356666676541 1279999999999999999999999998765
No 338
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=73.15 E-value=15 Score=26.73 Aligned_cols=41 Identities=32% Similarity=0.299 Sum_probs=32.2
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++..+++.. .++|||+-.+-.+...+..++..||++...
T Consensus 63 ~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~ 103 (126)
T 1dbw_A 63 VELLRNLGDLK--INIPSIVITGHGDVPMAVEAMKAGAVDFIE 103 (126)
T ss_dssp HHHHHHHHHTT--CCCCEEEEECTTCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcC--CCCCEEEEECCCCHHHHHHHHHhCHHHhee
Confidence 45566666543 268999999999999999999999997654
No 339
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=73.12 E-value=14 Score=32.79 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=51.5
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEE-----ccCCCCh----
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIA-----AGGIVDA---- 146 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPVia-----aGGI~~g---- 146 (300)
..+.+..+++.|++-|.+-.+.. .|.. .+...++.++++.+ ++||.+ .|+..-.
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~----------~GGl----TPS~g~i~~a~~~~---~ipV~vMIRPRgGdF~Ys~~E~ 110 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLS----------EGGT----TPSMGVLQVVKQSV---QIPVFVMIRPRGGDFLYSDREI 110 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGG----------GTCB----CCCHHHHHHHHTTC---CSCEEEECCSSSSCSCCCHHHH
T ss_pred CHHHHHHHHHhCCCEEEECCCCC----------CCCC----CCCHHHHHHHHHhc---CCCeEEEEecCCCCcccCHHHH
Confidence 35677788888998888753210 0000 12233444444443 455554 3333333
Q ss_pred ----HHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHc
Q 022271 147 ----RGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE 184 (300)
Q Consensus 147 ----~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~ 184 (300)
+|+..+..+|||||++|- .+++...+...-+.+++
T Consensus 111 ~~M~~dI~~~~~~GAdGvVfG~---L~~dg~iD~~~~~~Li~ 149 (287)
T 3iwp_A 111 EVMKADIRLAKLYGADGLVFGA---LTEDGHIDKELCMSLMA 149 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC---BCTTSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEee---eCCCCCcCHHHHHHHHH
Confidence 678888899999999992 34455566555555554
No 340
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=73.05 E-value=22 Score=32.37 Aligned_cols=154 Identities=19% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCccceecCCCCCCCCcH----HHHHHHHhCCceEEecCC--------CCC--CHHHHHHHHHHHHhhcCCcEEeeeecC
Q 022271 8 GFEYGIVQAPLGPDISGP----ELVAAVANAGGLGLLRAP--------DWE--APDYLRDLIRKTRSLTERPFGVGVVLA 73 (300)
Q Consensus 8 g~~~Pii~apM~~g~s~~----~la~avs~aGglG~i~~~--------~~~--~~~~l~~~i~~~r~~~~~P~gvnl~~~ 73 (300)
|-+.|++-|..+ .+-+. +++.++.++|.=-+..-. +|. ..+.+ +.+++.++.++.|+..-.+-.
T Consensus 103 G~~~~~vIAgpc-s~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl-~~l~~~~~e~Gl~~~te~~d~ 180 (350)
T 1vr6_A 103 GNGYFTIIAGPC-SVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGL-EYLREAADKYGMYVVTEALGE 180 (350)
T ss_dssp STTEEEEEEECS-BCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHH-HHHHHHHHHHTCEEEEECSSG
T ss_pred CCCCeEEEEeCC-CcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHH-HHHHHHHHHcCCcEEEEeCCH
Confidence 334455555554 25444 667777788864332210 011 12333 455556666677776544322
Q ss_pred C-------------------CcHHHHHHHHHcCCcEEEEcCCC--CcHHH---HHHHHHCCC---eEee----cc-----
Q 022271 74 F-------------------PHNENIKAILSEKVAVLQVSWGE--YSEEL---VLEAHSAGV---KVVP----QD----- 117 (300)
Q Consensus 74 ~-------------------~~~~~~~~~~e~g~~~i~~~~G~--~~~~~---v~~~~~~G~---~v~~----~~----- 117 (300)
. .+.+.++.+...+-+++... |. ...++ ++.+...|- .+.. ..
T Consensus 181 ~~~~~l~~~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~-G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~ 259 (350)
T 1vr6_A 181 DDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKR-GFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATR 259 (350)
T ss_dssp GGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEEEEC-CTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSS
T ss_pred HHHHHHHHhCCEEEECcccccCHHHHHHHHccCCcEEEcC-CCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcCh
Confidence 1 12345666666666666554 32 12333 334455553 2220 11
Q ss_pred --ChhchHHHHHHhhCCCCCcEEE-cc---CCCC--hHHHHHHHHCCCcEEEeccccc
Q 022271 118 --GLISLLPMVVDLIGDRDIPIIA-AG---GIVD--ARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 118 --~~~~ll~~v~~~~~~~~iPVia-aG---GI~~--g~~v~aal~lGAdgV~~GT~fl 167 (300)
-.+..++.+++.. ++||+. +. |-.+ ..-..+++++||+|+++=+-|-
T Consensus 260 ~~vdl~ai~~lk~~~---~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~ 314 (350)
T 1vr6_A 260 NTLDISAVPIIRKES---HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPE 314 (350)
T ss_dssp SBCCTTHHHHHHHHB---SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSC
T ss_pred hhhhHHHHHHHHHhh---CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCC
Confidence 1345678888775 689977 22 3332 3335677889999999976653
No 341
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=72.98 E-value=7 Score=35.34 Aligned_cols=122 Identities=9% Similarity=0.101 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHH-HHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC-CCChHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEE-LVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGY---VA 151 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~-~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG-I~~g~~v---~a 151 (300)
..+++.+++.|++.+.+. |..-+. .+.. .--..++..+++.+++ ++|||+.=| .++.+.+ ..
T Consensus 58 ~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~-----------eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~ 124 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGIL-GSTGIYMYLTR-----------EERRRAIEAAATILRG-RRTLMAGIGALRTDEAVALAKD 124 (332)
T ss_dssp HHHHHHHHHHTCSEEEES-STTTTGGGSCH-----------HHHHHHHHHHHHHHTT-SSEEEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccChhhCCH-----------HHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHH
Confidence 467788888899998775 321100 0000 0012455556666643 699987544 4444443 23
Q ss_pred HHHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 152 ALSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
+-.+|||+|++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 125 A~~~Gadavlv~~P~Y~~~s~~~l~~~f-~~VA~a~~lP-iilYn---~P~~tg~~l~~e~~~~La 185 (332)
T 2r8w_A 125 AEAAGADALLLAPVSYTPLTQEEAYHHF-AAVAGATALP-LAIYN---NPTTTRFTFSDELLVRLA 185 (332)
T ss_dssp HHHHTCSEEEECCCCSSCCCHHHHHHHH-HHHHHHCSSC-EEEEC---CHHHHCCCCCHHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CccccCcCCCHHHHHHHH
Confidence 4558999999999998642 11222233 3344444433 23443 233333345555555543
No 342
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=72.57 E-value=49 Score=28.94 Aligned_cols=156 Identities=17% Similarity=0.106 Sum_probs=85.6
Q ss_pred cceecCCCCC-CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--H
Q 022271 11 YGIVQAPLGP-DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--N 77 (300)
Q Consensus 11 ~Pii~apM~~-g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~ 77 (300)
+|-+.-||.- |+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .
T Consensus 7 ~~a~vTPf~~dgiD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai 86 (291)
T 3a5f_A 7 GVAIITPFTNTGVDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASI 86 (291)
T ss_dssp EEECCCCBCSSSBCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHH
T ss_pred eeeeEcCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHH
Confidence 3444457731 2333 35555566788777765532 368888888888777653 35776665443221 3
Q ss_pred HHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEeec------------------------------cCh
Q 022271 78 ENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVPQ------------------------------DGL 119 (300)
Q Consensus 78 ~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~~------------------------------~~~ 119 (300)
+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..++.++.- .+.
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd 166 (291)
T 3a5f_A 87 AMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVXEASGN 166 (291)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEeCCCCC
Confidence 456667778888876531 1111 22232221 123333211 123
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
+..+.++++... .+..| ..| +...+..++.+|++|++-|+..+++++
T Consensus 167 ~~~~~~~~~~~~-~~f~v-~~G---~d~~~~~~l~~G~~G~is~~an~~P~~ 213 (291)
T 3a5f_A 167 ISQIAQIKALCG-DKLDI-YSG---NDDQIIPILALGGIGVISVLANVIPED 213 (291)
T ss_dssp HHHHHHHHHHHG-GGSEE-EES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred HHHHHHHHHhcC-CCeEE-EeC---cHHHHHHHHHCCCCEEEecHHHhcHHH
Confidence 334445554432 13333 444 234577899999999999999886654
No 343
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.53 E-value=31 Score=31.03 Aligned_cols=102 Identities=17% Similarity=0.109 Sum_probs=61.7
Q ss_pred HHHHHHHhCCc--eEEecCCCCCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc-HHHHHHHHHcCCcEEEEcC-----
Q 022271 26 ELVAAVANAGG--LGLLRAPDWEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH-NENIKAILSEKVAVLQVSW----- 95 (300)
Q Consensus 26 ~la~avs~aGg--lG~i~~~~~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~----- 95 (300)
+++.++..+|. +.+-...|+.+|+++.+.++++|+.+ +.|+++-.-..... ......++++|++.|..+.
T Consensus 153 ~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~ 232 (345)
T 1nvm_A 153 EQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGA 232 (345)
T ss_dssp HHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred HHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccC
Confidence 34444455554 44444445679999999999999987 67777643322222 4566778889999998653
Q ss_pred --CCC-cHHHHHHHHHCCCeEeeccChhchHHHHHHhh
Q 022271 96 --GEY-SEELVLEAHSAGVKVVPQDGLISLLPMVVDLI 130 (300)
Q Consensus 96 --G~~-~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~ 130 (300)
|.+ ...++..++..|..... .+.-|.++.+.+
T Consensus 233 ~aGN~~le~lv~~L~~~g~~~~i---dl~~l~~~~~~~ 267 (345)
T 1nvm_A 233 GAGNAPLEVFIAVAERLGWNHGT---DLYTLMDAADDI 267 (345)
T ss_dssp TTCBCBHHHHHHHHHHHTCBCCS---CHHHHHHHHHHT
T ss_pred CccCcCHHHHHHHHHhcCCCCCC---CHHHHHHHHHHH
Confidence 333 35666666665544211 234444454443
No 344
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=72.18 E-value=6.9 Score=34.03 Aligned_cols=55 Identities=22% Similarity=0.280 Sum_probs=44.1
Q ss_pred HCCCeEeec----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccc
Q 022271 108 SAGVKVVPQ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTR 165 (300)
Q Consensus 108 ~~G~~v~~~----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~ 165 (300)
..++.|... .|.+..|.++++++ ++||+.=-=|.++.++.++..+|||+|.+=-.
T Consensus 74 A~~IsVlTd~~~F~gs~~dL~~ir~~v---~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a 132 (251)
T 1i4n_A 74 ADAISILTEKHYFKGDPAFVRAARNLT---CRPILAKDFYIDTVQVKLASSVGADAILIIAR 132 (251)
T ss_dssp CSEEEEECCCSSSCCCTHHHHHHHTTC---CSCEEEECCCCSTHHHHHHHHTTCSEEEEEGG
T ss_pred CCceEEEecccccCCCHHHHHHHHHhC---CCCEEEeeCCCCHHHHHHHHHcCCCEEEEecc
Confidence 345555432 36778889999887 89999988899999999999999999987443
No 345
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=72.09 E-value=25 Score=25.78 Aligned_cols=44 Identities=18% Similarity=0.158 Sum_probs=33.2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
.+.++.++++.....++|||+-.+-.+......++..||+++..
T Consensus 69 g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~ 112 (143)
T 3cnb_A 69 GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFG 112 (143)
T ss_dssp HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEe
Confidence 34566666652111379999999999999999999999998764
No 346
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=71.56 E-value=49 Score=29.87 Aligned_cols=117 Identities=13% Similarity=0.071 Sum_probs=71.0
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHc--CCcEE-EEcCCCCcHH--HHHHHHHCCCeEeecc---
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSE--KVAVL-QVSWGEYSEE--LVLEAHSAGVKVVPQD--- 117 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~--g~~~i-~~~~G~~~~~--~v~~~~~~G~~v~~~~--- 117 (300)
.+++++.+..++..+..=+-+-+++ .+....+.++.+.+. .+++. ..+.+-.+++ +.+.+.+.|+..+.+.
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~-~~~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEqP~~~ 225 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKI-KPGWDVQPVRATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIEQPLAW 225 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEEC-BTTBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEECCSCT
T ss_pred CCHHHHHHHHHHHHHhcccEEEEec-ChHHHHHHHHHHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEECCCCc
Confidence 3788777766666543212233333 122345556666554 23332 2232322333 3333456787777641
Q ss_pred ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 118 GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 118 ~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
..+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++--..
T Consensus 226 ~d~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 272 (375)
T 1r0m_A 226 DDLVDHAELARRI---RTPLCLDESVASASDARKALALGAGGVINLKVAR 272 (375)
T ss_dssp TCSHHHHHHHHHC---SSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTT
T ss_pred ccHHHHHHHHHhC---CCCEEecCccCCHHHHHHHHHhCCCCEEEECcch
Confidence 2456677788776 79999999999999999999876 7899985433
No 347
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=71.49 E-value=15 Score=32.69 Aligned_cols=123 Identities=18% Similarity=0.204 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
...++.+++.|++.+.+. |..- +.... ...--..++..+++.+++ ++|||+.=|=.+-+++. .+
T Consensus 36 ~~lv~~li~~Gv~gl~v~-GtTG-E~~~L---------s~eEr~~vi~~~~~~~~g-rvpViaGvg~~st~~ai~la~~A 103 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVL-GTTG-ESPTV---------NEDEREKLVSRTLEIVDG-KIPVIVGAGTNSTEKTLKLVKQA 103 (306)
T ss_dssp HHHHHHHHHTTCCEEEES-SGGG-TGGGC---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-cccc-chhhC---------CHHHHHHHHHHHHHHhCC-CCeEEEcCCCccHHHHHHHHHHH
Confidence 466788888899988765 3211 00000 000012455556666543 68988665544434332 34
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 104 ~~~Gadavlv~~P~y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 104 EKLGANGVLVVTPYYNKPTQEGLYQ-HYKYISERTDLG-IVVYN---VPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHH-HHHHHHTTCSSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHH-HHHHHHHhCCCC-EEEEe---CccccCcCCCHHHHHHHH
Confidence 458999999999998653 111222 223444444433 23443 234333445555555543
No 348
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=71.39 E-value=8.1 Score=30.80 Aligned_cols=67 Identities=25% Similarity=0.250 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+...+..++..|
T Consensus 41 ~~al~~~~~~~~dlvl~D~~lp~-----------------~~g~~~~~~l~~~~--~~~~ii~lt~~~~~~~~~~a~~~G 101 (184)
T 3rqi_A 41 DEALKLAGAEKFEFITVXLHLGN-----------------DSGLSLIAPLCDLQ--PDARILVLTGYASIATAVQAVKDG 101 (184)
T ss_dssp HHHHHHHTTSCCSEEEECSEETT-----------------EESHHHHHHHHHHC--TTCEEEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCEEEEeccCCC-----------------ccHHHHHHHHHhcC--CCCCEEEEeCCCCHHHHHHHHHhC
Confidence 44555555556666666543321 12356667776653 279999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 102 a~~~l~ 107 (184)
T 3rqi_A 102 ADNYLA 107 (184)
T ss_dssp CSEEEE
T ss_pred HHHhee
Confidence 998765
No 349
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.31 E-value=2.3 Score=36.38 Aligned_cols=93 Identities=12% Similarity=0.066 Sum_probs=56.1
Q ss_pred cEEeeeecCCCc----HHHHHHHHHcCCcEEEEc--CCCCc--HHHHH----HHHHCCCeEeeccChhchHHHHHHhhCC
Q 022271 65 PFGVGVVLAFPH----NENIKAILSEKVAVLQVS--WGEYS--EELVL----EAHSAGVKVVPQDGLISLLPMVVDLIGD 132 (300)
Q Consensus 65 P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~--~G~~~--~~~v~----~~~~~G~~v~~~~~~~~ll~~v~~~~~~ 132 (300)
++...++..++. .+.++.+.+. ++.+.+. +..|. ...+. +.-+.|... ...+.++.++++.+
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~---~~~~~~i~~i~~~~-- 79 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKL---REAFWIVKEFRRHS-- 79 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCH---HHHHHHHHHHHTTC--
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCH---HHHHHHHHHHHhhC--
Confidence 445555555564 2345666667 8888765 22221 11222 223345211 11356667777665
Q ss_pred CCCcEEEccCCCC------hHHHHHHHHCCCcEEEecc
Q 022271 133 RDIPIIAAGGIVD------ARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 133 ~~iPViaaGGI~~------g~~v~aal~lGAdgV~~GT 164 (300)
++||...+++.. -+.+..++..|||+|.+++
T Consensus 80 -~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 80 -STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp -CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred -CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 789988766544 4788899999999999995
No 350
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=71.10 E-value=13 Score=27.31 Aligned_cols=81 Identities=11% Similarity=-0.020 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ...+.++.++++.. .++|||+-.+-.+......++..|
T Consensus 36 ~~a~~~~~~~~~dlii~d~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g 96 (134)
T 3f6c_A 36 GSAVQRVETLKPDIVIIDVDIPG-----------------VNGIQVLETLRKRQ--YSGIIIIVSAKNDHFYGKHCADAG 96 (134)
T ss_dssp TTHHHHHHHHCCSEEEEETTCSS-----------------SCHHHHHHHHHHTT--CCSEEEEEECC---CTHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEecCCCC-----------------CChHHHHHHHHhcC--CCCeEEEEeCCCChHHHHHHHHhC
Confidence 44555566667777777654431 12356666676643 278999999999999999999999
Q ss_pred CcEEEeccccccCcccCCCHHHHHHHHc
Q 022271 157 AQGICLGTRFVASEESYAHPEYKRKLVE 184 (300)
Q Consensus 157 AdgV~~GT~fl~t~Es~~~~~~k~~i~~ 184 (300)
|+++..= + --.+...++|..
T Consensus 97 ~~~~l~k------p--~~~~~l~~~i~~ 116 (134)
T 3f6c_A 97 ANGFVSK------K--EGMNNIIAAIEA 116 (134)
T ss_dssp CSEEEEG------G--GCTHHHHHHHHH
T ss_pred CCEEEeC------C--CCHHHHHHHHHH
Confidence 9987552 1 124556666654
No 351
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=71.01 E-value=14 Score=32.67 Aligned_cols=123 Identities=11% Similarity=0.109 Sum_probs=63.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH-H---HHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG-Y---VAA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v---~aa 152 (300)
..+++.+++.|++.+.+. |...+ .... ...--..++..+++.+++ ++|||+.=|=.+-++ + ..+
T Consensus 24 ~~lv~~li~~Gv~gl~~~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A 91 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVC-GTTGE-SPTL---------TFEEHEKVIEFAVKRAAG-RIKVIAGTGGNATHEAVHLTAHA 91 (294)
T ss_dssp HHHHHHHHTTTCCEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 566778888889888765 32110 0000 000012455556666543 689987655444343 3 234
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f-~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 92 KEVGADGALVVVPYYNKPTQRGLYEHF-KTVAQEVDIP-IIIYN---IPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHH-HHHHHHCCSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CCcccCcCCCHHHHHHHH
Confidence 569999999999998642 11122223 3444444433 23443 133333345555555543
No 352
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=70.91 E-value=12 Score=33.36 Aligned_cols=124 Identities=14% Similarity=0.183 Sum_probs=66.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+.+. |...+ .... ...--..++..+++.+++ ++|||+.-|=.+-++.. .+
T Consensus 31 ~~lv~~li~~Gv~Gl~v~-GtTGE-~~~L---------s~~Er~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A 98 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLA-GTTAE-SPTL---------THDEELELFAAVQKVVNG-RVPLIAGVGTNDTRDSIEFVKEV 98 (311)
T ss_dssp HHHHHHHHHTTCCCEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHSCS-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 567888888899887765 32110 0000 000012455556666543 69999865544444433 34
Q ss_pred HHCCC-cEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhhc
Q 022271 153 LSLGA-QGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWKN 217 (300)
Q Consensus 153 l~lGA-dgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~~ 217 (300)
-.+|| |++++-++|.... +...-. |=+.|.++.+.- ..++. .|++.+.-+..+.+.++.+
T Consensus 99 ~~~Ga~davlv~~P~y~~~s~~~l~~-~f~~va~a~~lP-iilYn---~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 99 AEFGGFAAGLAIVPYYNKPSQEGMYQ-HFKAIADASDLP-IIIYN---IPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp HHSCCCSEEEEECCCSSCCCHHHHHH-HHHHHHHSCSSC-EEEEE---CHHHHSSCCCHHHHHHHHT
T ss_pred HhcCCCcEEEEcCCCCCCCCHHHHHH-HHHHHHHhCCCC-EEEEe---cccccCCCCCHHHHHHHhc
Confidence 45897 9999999988653 111222 333444444433 23443 2444445555555555543
No 353
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=70.75 E-value=30 Score=25.66 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ...+.++.++++.-...++|||+-.+-.+...+..++..|
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~-----------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g 103 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPI-----------------ANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAG 103 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGG-----------------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcC
Confidence 44555555556666666554321 1235566666652111379999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|+++..
T Consensus 104 a~~~l~ 109 (144)
T 3kht_A 104 ASSVVD 109 (144)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998755
No 354
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=70.73 E-value=40 Score=30.87 Aligned_cols=119 Identities=8% Similarity=0.062 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHHhhc-CCcEEeeeecCCC----cHHHHHHHHHc-CCcE--E-EEcCCCCcH---HHHHHHHHCCCeE
Q 022271 46 EAPDYLRDLIRKTRSLT-ERPFGVGVVLAFP----HNENIKAILSE-KVAV--L-QVSWGEYSE---ELVLEAHSAGVKV 113 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~----~~~~~~~~~e~-g~~~--i-~~~~G~~~~---~~v~~~~~~G~~v 113 (300)
.+++++.+..++..+.. .+--.+++-...+ +.+.++.+.+. |+++ . ..+.+-.+. .+.+.+.+.|+..
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~ 249 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEW 249 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSE
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCE
Confidence 46777777777665441 0222344443322 13345555553 4442 2 233232233 3455566778888
Q ss_pred eecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 114 VPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 114 ~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+-+. ..+.-+.++++.+ ++||.+..-+.+..++..++..| +|.|++-...+
T Consensus 250 iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~ 304 (390)
T 3ugv_A 250 IEEPVVYDNFDGYAQLRHDL---KTPLMIGENFYGPREMHQALQAGACDLVMPDFMRI 304 (390)
T ss_dssp EECCSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHH
T ss_pred EECCCCcccHHHHHHHHHhc---CCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 7651 2455677788776 79999999999999999999986 68888754444
No 355
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=70.59 E-value=3.6 Score=38.15 Aligned_cols=60 Identities=28% Similarity=0.412 Sum_probs=42.7
Q ss_pred HHHHHHHHCCCeEeec---cC----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 101 ELVLEAHSAGVKVVPQ---DG----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~---~~----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
+.++.+.++|...+.. .+ ...++.++++.+. ++||++ |++.+.+++..+...|||+|.+|
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~--~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYP--NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT--TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCC--CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 4455566788776642 12 3445555566542 689987 78889999999999999999994
No 356
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=70.56 E-value=20 Score=25.64 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..++++.+....|. ..-+.++.++++ . .++|||.-.+-.+......++..|
T Consensus 36 ~~~~~~~~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~-~--~~~~ii~~s~~~~~~~~~~~~~~g 95 (122)
T 1zgz_A 36 AGLREIMQNQSVDLILLDINLPD-----------------ENGLMLTRALRE-R--STVGIILVTGRSDRIDRIVGLEMG 95 (122)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSS-----------------SCHHHHHHHHHT-T--CCCEEEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCEEEEeCCCCC-----------------CChHHHHHHHHh-c--CCCCEEEEECCCChhhHHHHHHhC
Confidence 44555555566777776654431 122455666665 2 268999998989999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 96 a~~~l~ 101 (122)
T 1zgz_A 96 ADDYVT 101 (122)
T ss_dssp CSEEEE
T ss_pred HHHHcc
Confidence 998765
No 357
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=70.56 E-value=29 Score=29.80 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=72.3
Q ss_pred cHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh-------------------------cCCcEEeeeecCCCc-H
Q 022271 24 GPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-------------------------TERPFGVGVVLAFPH-N 77 (300)
Q Consensus 24 ~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~-------------------------~~~P~gvnl~~~~~~-~ 77 (300)
++.+..++..+|.-|++-. ...+++++++.++.++.- .+..+.+-.+...+. .
T Consensus 80 ~~~~i~~~l~~g~~gI~~P-~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av 158 (256)
T 1dxe_A 80 EPVIIKRLLDIGFYNFLIP-FVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp CHHHHHHHHHTTCCEEEES-CCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CHHHHHHHHhcCCceeeec-CcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHH
Confidence 4566777788888887643 346888887766666420 011122222222111 2
Q ss_pred HHHHHHHHc-CCcEEEEcCCCCcHHHHHHHHHCCCeEeec-cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 78 ENIKAILSE-KVAVLQVSWGEYSEELVLEAHSAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 78 ~~~~~~~e~-g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..++.+.+. +++.+.+ | +.++...+ |...-.. ......+.++..+.+..++|+..-. .|++.+...+.+
T Consensus 159 ~~~~eIa~~~~vd~l~i--G--~~DL~~~l---g~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~--~d~~~~~~~~~~ 229 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFV--G--PSDLAAAL---GHLGNASHPDVQKAIQHIFNRASAHGKPSGILA--PVEADARRYLEW 229 (256)
T ss_dssp HTHHHHHTSTTCCEEEE--C--HHHHHHHT---TCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC--CSHHHHHHHHHT
T ss_pred HhHHHHhCCCCCCEEEE--C--hHHHHHHh---CCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec--CCHHHHHHHHHc
Confidence 345666553 6787776 4 23444433 3211000 1133444455444322256664433 389999999999
Q ss_pred CCcEEEeccc
Q 022271 156 GAQGICLGTR 165 (300)
Q Consensus 156 GAdgV~~GT~ 165 (300)
|.+.+.+|+-
T Consensus 230 G~~~~s~~~d 239 (256)
T 1dxe_A 230 GATFVAVGSD 239 (256)
T ss_dssp TCCEEEEEEH
T ss_pred CCCEEEechH
Confidence 9999999864
No 358
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=70.48 E-value=51 Score=29.87 Aligned_cols=117 Identities=8% Similarity=-0.005 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC----cHHHHHHHHHc-CCcE-E--EEcCCCCcHH---HHHHHHHCCCeEee
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP----HNENIKAILSE-KVAV-L--QVSWGEYSEE---LVLEAHSAGVKVVP 115 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~----~~~~~~~~~e~-g~~~-i--~~~~G~~~~~---~v~~~~~~G~~v~~ 115 (300)
+++++.+..++..+.. +--.+++-...+ +.+.++.+.+. |+++ + ..+.+-.+.+ +.+.+.+.|+..+.
T Consensus 151 ~~~~~~~~a~~~~~~~-G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 229 (372)
T 3tj4_A 151 TLEDLLAGSARAVEED-GFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFE 229 (372)
T ss_dssp CHHHHHHHHHHHHHTT-CCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEE
T ss_pred CHHHHHHHHHHHHHcc-CCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 6777777766665431 122344433222 13345555543 3443 2 2232322333 34445567777776
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+. ..+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++-...+
T Consensus 230 qP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 282 (372)
T 3tj4_A 230 EPLWYDDVTSHARLARNT---SIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRL 282 (372)
T ss_dssp SCSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTT
T ss_pred CCCCchhHHHHHHHHhhc---CCCEEeCCCccCHHHHHHHHHcCCCCEEEeCcccc
Confidence 41 1355677777776 79999999999999999999986 68888854443
No 359
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=70.27 E-value=24 Score=25.44 Aligned_cols=69 Identities=13% Similarity=0.229 Sum_probs=44.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..++++.+....|. ..-+.++..+++......+|||.-.+-.+...+..++..|
T Consensus 39 ~~a~~~~~~~~~dlvi~D~~l~~-----------------~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g 101 (128)
T 1jbe_A 39 VDALNKLQAGGYGFVISDWNMPN-----------------MDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAG 101 (128)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSS-----------------SCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCC-----------------CCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhC
Confidence 34444444555666666554331 1234556666652111268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 102 a~~~l~ 107 (128)
T 1jbe_A 102 ASGYVV 107 (128)
T ss_dssp CSEEEE
T ss_pred cCceee
Confidence 998654
No 360
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=70.27 E-value=34 Score=30.84 Aligned_cols=117 Identities=9% Similarity=0.026 Sum_probs=71.1
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHc--CCcEE-EEcCCCCcHH--HHHHHHHCCCeEeecc---C
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSE--KVAVL-QVSWGEYSEE--LVLEAHSAGVKVVPQD---G 118 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~--g~~~i-~~~~G~~~~~--~v~~~~~~G~~v~~~~---~ 118 (300)
+++++.+..++..+..=.-+-+++ .+..+.+.++.+.+. .+++. ..+.+-.+++ +.+.+++.|+..+.+. .
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~-~~~~d~~~v~avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEqP~~~~ 219 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI-KPGWDYEVLKAVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIEQPLAYD 219 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC-BTTBSHHHHHHHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEECCSCTT
T ss_pred CHHHHHHHHHHHHHhhhheeeeec-ChhHHHHHHHHHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEECCCCcc
Confidence 787777766666543212222333 122345566666554 23332 2232222233 3334456787777641 2
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++=-..+
T Consensus 220 d~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 266 (369)
T 2zc8_A 220 DLLDHAKLQREL---STPICLDESLTGAEKARKAIELGAGRVFNVKPARL 266 (369)
T ss_dssp CSHHHHHHHHHC---SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred cHHHHHHHHhhC---CCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhh
Confidence 456677788776 79999999999999999999987 78999854433
No 361
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=70.03 E-value=18 Score=26.09 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ...+.++.++++.. .++|||.-.+-.+......++..|
T Consensus 37 ~~a~~~~~~~~~dlvl~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g 97 (124)
T 1srr_A 37 LQALDIVTKERPDLVLLDMKIPG-----------------MDGIEILKRMKVID--ENIRVIIMTAYGELDMIQESKELG 97 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTT-----------------CCHHHHHHHHHHHC--TTCEEEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCEEEEecCCCC-----------------CCHHHHHHHHHHhC--CCCCEEEEEccCchHHHHHHHhcC
Confidence 45555666666777776654431 12345566666543 268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 98 ~~~~l~ 103 (124)
T 1srr_A 98 ALTHFA 103 (124)
T ss_dssp CCCEEE
T ss_pred hHhhcc
Confidence 987653
No 362
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=70.02 E-value=23 Score=25.31 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++. . ++|++.-.+-.+......++..|
T Consensus 37 ~~a~~~~~~~~~dlvi~D~~l~~-----------------~~g~~~~~~l~~~-~--~~~ii~~s~~~~~~~~~~~~~~g 96 (123)
T 1xhf_A 37 AEMHQILSEYDINLVIMDINLPG-----------------KNGLLLARELREQ-A--NVALMFLTGRDNEVDKILGLEIG 96 (123)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSS-----------------SCHHHHHHHHHHH-C--CCEEEEEESCCSHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCEEEEcCCCCC-----------------CCHHHHHHHHHhC-C--CCcEEEEECCCChHHHHHHHhcC
Confidence 45555566666777776654431 1224556666654 2 68999988888999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 97 ~~~~l~ 102 (123)
T 1xhf_A 97 ADDYIT 102 (123)
T ss_dssp CSEEEE
T ss_pred cceEEe
Confidence 998654
No 363
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=70.01 E-value=56 Score=28.58 Aligned_cols=141 Identities=13% Similarity=0.068 Sum_probs=74.6
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-...+|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5566566777767765432 367777777777776653 35665554432211 2334455556666554321
Q ss_pred ----------------------------------CC-CcHHHHHHHH-HCCCeEeec--cChhchHHHHHHhhCCCCCcE
Q 022271 96 ----------------------------------GE-YSEELVLEAH-SAGVKVVPQ--DGLISLLPMVVDLIGDRDIPI 137 (300)
Q Consensus 96 ----------------------------------G~-~~~~~v~~~~-~~G~~v~~~--~~~~~ll~~v~~~~~~~~iPV 137 (300)
|. .+.+.+.++- +..-.+... .+.+..+.++++... .+..|
T Consensus 105 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~gd~~~~~~~~~~~~-~~f~v 183 (294)
T 2ehh_A 105 YYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKESTPNMDRISEIVKRLG-ESFSV 183 (294)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHC-TTSEE
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHhcC-CCeEE
Confidence 11 1223333332 222111111 123344445554442 13444
Q ss_pred EEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 138 IAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 138 iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+| +...+..++.+|++|++-|+..+++++
T Consensus 184 -~~G---~d~~~~~~l~~G~~G~is~~an~~P~~ 213 (294)
T 2ehh_A 184 -LSG---DDSLTLPMMALGAKGVISVANNVMPRE 213 (294)
T ss_dssp -EES---SGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred -EEC---cHHHHHHHHHCCCCEEEeCHHHhhHHH
Confidence 344 234577899999999999999887654
No 364
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.92 E-value=24 Score=31.53 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHH-HH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG-YV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~-v~---aa 152 (300)
..+++.+++.|++.+.+. |... +.... ...--..++..+++.+++ ++|||+.=|=.+-++ +. .+
T Consensus 35 ~~lv~~li~~Gv~gl~v~-GtTG-E~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 102 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVIL-GTNA-EAFLL---------TREERAQLIATARKAVGP-DFPIMAGVGAHSTRQVLEHINDA 102 (318)
T ss_dssp HHHHHHHHTTTCSEEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHHHCT-TSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-cccc-ChhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 456788888899988765 3211 00000 000012455556666543 699987555334433 32 44
Q ss_pred HHCCCcEEEeccccccC---cccCCCHHHHHHHHcCCCcceEEEecccCCCCCC-CceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVAS---EESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAP-HRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t---~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~-~R~l~n~~~~~~~ 216 (300)
-.+|||++++-+.|... .+...-. |=+.|.++.+.- ..++. .|++. +.-+..+.+.++.
T Consensus 103 ~~~Gadavlv~~P~y~~kp~~~~~l~~-~f~~ia~a~~lP-iilYn---~P~~t~g~~l~~~~~~~La 165 (318)
T 3qfe_A 103 SVAGANYVLVLPPAYFGKATTPPVIKS-FFDDVSCQSPLP-VVIYN---FPGVCNGIDLDSDMITTIA 165 (318)
T ss_dssp HHHTCSEEEECCCCC---CCCHHHHHH-HHHHHHHHCSSC-EEEEE---CCC----CCCCHHHHHHHH
T ss_pred HHcCCCEEEEeCCcccCCCCCHHHHHH-HHHHHHhhCCCC-EEEEe---CCcccCCCCCCHHHHHHHH
Confidence 45899999999996543 2222223 334455544433 23453 24543 4446656666554
No 365
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=69.83 E-value=13 Score=33.19 Aligned_cols=119 Identities=13% Similarity=0.199 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH---HHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV---AAL 153 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~---aal 153 (300)
..+++.+++.|++.+... |..- +.... ...--..++..+++.+++ ++|||+.=|=++.+.+. .+-
T Consensus 36 ~~lv~~li~~Gv~gl~v~-GtTG-E~~~L---------s~eEr~~vi~~~~~~~~g-rvpViaGvg~st~~ai~la~~A~ 103 (314)
T 3d0c_A 36 DDNVEFLLQNGIEVIVPN-GNTG-EFYAL---------TIEEAKQVATRVTELVNG-RATVVAGIGYSVDTAIELGKSAI 103 (314)
T ss_dssp HHHHHHHHHTTCSEECTT-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSEEEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccC-ChhhC---------CHHHHHHHHHHHHHHhCC-CCeEEecCCcCHHHHHHHHHHHH
Confidence 466778888899888654 3210 00000 000012445556666543 68998644434444332 344
Q ss_pred HCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 154 SLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 154 ~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
.+|||++++-++|.... +...-..|+ .|.++.+.- ..++. +.+. +....+.++.
T Consensus 104 ~~Gadavlv~~P~y~~~s~~~l~~~f~-~va~a~~lP-iilYn------~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 104 DSGADCVMIHQPVHPYITDAGAVEYYR-NIIEALDAP-SIIYF------KDAH-LSDDVIKELA 158 (314)
T ss_dssp HTTCSEEEECCCCCSCCCHHHHHHHHH-HHHHHSSSC-EEEEE------CCTT-SCTHHHHHHT
T ss_pred HcCCCEEEECCCCCCCCCHHHHHHHHH-HHHHhCCCC-EEEEe------CCCC-cCHHHHHHHH
Confidence 58999999999988643 212223333 344444433 23443 2234 6666665553
No 366
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=69.76 E-value=59 Score=28.70 Aligned_cols=142 Identities=18% Similarity=0.080 Sum_probs=74.5
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.+|. .++.++-++.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5666666778777765432 367888777788777653 35665555433211 2344455556666654321
Q ss_pred ----------------------------------CC-CcHHHHHHHH-HCCCeEeec--cChhchHHHHHHhhCC--CCC
Q 022271 96 ----------------------------------GE-YSEELVLEAH-SAGVKVVPQ--DGLISLLPMVVDLIGD--RDI 135 (300)
Q Consensus 96 ----------------------------------G~-~~~~~v~~~~-~~G~~v~~~--~~~~~ll~~v~~~~~~--~~i 135 (300)
|. .+.+.+.++- +..-.+... .+.+..+.++++...+ .+.
T Consensus 117 ~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~~~~~~~f 196 (306)
T 1o5k_A 117 YYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEANPDIDQIDRTVSLTKQARSDF 196 (306)
T ss_dssp CSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHHHHHHHHHHHHCTTC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHhcCCCCCcE
Confidence 11 1223333332 222111111 1223334444443310 023
Q ss_pred cEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 136 PIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 136 PViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.| ..| +...+..++.+|++|++-|+..+++++
T Consensus 197 ~v-~~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 228 (306)
T 1o5k_A 197 MV-WSG---NDDRTFYLLCAGGDGVISVVSNVAPKQ 228 (306)
T ss_dssp EE-EES---SGGGHHHHHHHTCCEEEESGGGTCHHH
T ss_pred EE-EEC---cHHHHHHHHHCCCCEEEecHHHhhHHH
Confidence 33 344 234578889999999999999887654
No 367
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=69.76 E-value=48 Score=29.98 Aligned_cols=118 Identities=15% Similarity=0.121 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCCCc---HHHHHHHHHc-CCcE-E--EEcCCCCcH---HHHHHHHHCCCeEee
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAFPH---NENIKAILSE-KVAV-L--QVSWGEYSE---ELVLEAHSAGVKVVP 115 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~---~~~~~~~~e~-g~~~-i--~~~~G~~~~---~~v~~~~~~G~~v~~ 115 (300)
.+++++.+..++..+. +.-.+++-..... .+.++.+.+. |+++ + ..+.+-.+. .+.+.+.+.|+..+.
T Consensus 139 ~~~e~~~~~a~~~~~~--G~~~~K~KvG~~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE 216 (368)
T 3q45_A 139 DEPHKMAADAVQIKKN--GFEIIKVKVGGSKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCE 216 (368)
T ss_dssp CCHHHHHHHHHHHHHT--TCSEEEEECCSCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEE
T ss_pred CCHHHHHHHHHHHHHc--CCCeEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEE
Confidence 4677776666665543 1223333222221 2334444442 3432 1 223222222 344556667777765
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+. ..+..+.++++.. ++||.+...+.+..++..++..| +|.|++--..+.
T Consensus 217 qP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 270 (368)
T 3q45_A 217 EPVSRNLYTALPKIRQAC---RIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSA 270 (368)
T ss_dssp CCBCGGGGGGHHHHHHTC---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTT
T ss_pred CCCChhHHHHHHHHHhhC---CCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcC
Confidence 41 2356677888776 79999999999999999999975 789988654443
No 368
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=69.44 E-value=60 Score=28.66 Aligned_cols=160 Identities=17% Similarity=0.166 Sum_probs=87.2
Q ss_pred cCCccceecCCCCC--CCCcH---HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 7 LGFEYGIVQAPLGP--DISGP---ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 7 lg~~~Pii~apM~~--g~s~~---~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
-|+ +|-+.-||.- .+... +++.-..++|.=|++.++. .++.++-++.++.+.+.. +.|+-++.-...
T Consensus 16 ~Gi-~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 94 (307)
T 3s5o_A 16 AGI-YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCES 94 (307)
T ss_dssp CEE-ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSS
T ss_pred Cce-EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Confidence 344 3444457731 12223 4555556778777775532 367888888888887764 356655543322
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---C--CCc-HHHHHHHH----HCCCeEeec--------------------------
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---G--EYS-EELVLEAH----SAGVKVVPQ-------------------------- 116 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G--~~~-~~~v~~~~----~~G~~v~~~-------------------------- 116 (300)
.. .+..+.+.+.|++.+.+.. - .++ +.+++..+ ..++.++.-
T Consensus 95 t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 174 (307)
T 3s5o_A 95 TQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVG 174 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEE
Confidence 11 3455666677888776521 1 011 23333222 234444321
Q ss_pred ----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 ----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++.+.....+..|+ +|. ...+..++.+|++|++-|+..++.++
T Consensus 175 iKdssgd~~~~~~~~~~~~~~~f~v~-~G~---d~~~l~~l~~G~~G~is~~an~~P~~ 229 (307)
T 3s5o_A 175 MXDSGGDVTRIGLIVHKTRKQDFQVL-AGS---AGFLMASYALGAVGGVCALANVLGAQ 229 (307)
T ss_dssp EEECSCCHHHHHHHHHHTTTSSCEEE-ESS---GGGHHHHHHHTCCEEECGGGGTCHHH
T ss_pred EEcCCCCHHHHHHHHHhccCCCeEEE-eCc---HHHHHHHHHcCCCEEEechhhhhHHH
Confidence 1233444455444321234443 332 24578899999999999999887654
No 369
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=69.40 E-value=12 Score=33.01 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=52.9
Q ss_pred cCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEcc
Q 022271 62 TERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAG 141 (300)
Q Consensus 62 ~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaG 141 (300)
...++-++. ...+.++.+.+.|++.|..- +| .+.... ...|... ......+.++++.+ ++||++
T Consensus 20 ~~~g~i~~~----~~~~~a~~~~~~Ga~~I~~l--~p-~~~~~~-~~~G~~~---~~~~~~i~~I~~~~---~iPv~~-- 83 (305)
T 2nv1_A 20 QKGGVIMDV----INAEQAKIAEEAGAVAVMAL--ER-VPADIR-AAGGVAR---MADPTIVEEVMNAV---SIPVMA-- 83 (305)
T ss_dssp TTTCEEEEE----SSHHHHHHHHHTTCSEEEEC--CC---------CCCCCC---CCCHHHHHHHHHHC---SSCEEE--
T ss_pred ccCCeeecC----CHHHHHHHHHHcCCCEEEEc--CC-Ccchhh-hccCccc---CCCHHHHHHHHHhC---CCCEEe--
Confidence 344554443 34678899999999999443 13 122221 1122111 12456777787776 799985
Q ss_pred CCCC--hHHHHHHHHCCCcEEEeccccc
Q 022271 142 GIVD--ARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 142 GI~~--g~~v~aal~lGAdgV~~GT~fl 167 (300)
++.. -..+..++++|||+|. ++..+
T Consensus 84 k~r~g~~~~~~~~~a~GAd~V~-~~~~l 110 (305)
T 2nv1_A 84 KARIGHIVEARVLEAMGVDYID-ESEVL 110 (305)
T ss_dssp EECTTCHHHHHHHHHHTCSEEE-ECTTS
T ss_pred cccccchHHHHHHHHCCCCEEE-EeccC
Confidence 4444 6677788889999997 66544
No 370
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=69.36 E-value=13 Score=32.65 Aligned_cols=123 Identities=17% Similarity=0.207 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHH---HHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGY---VAA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v---~aa 152 (300)
..+++.+++.|++.+... |...+ .... ...--..++..+++.+++ ++|||+.=|= ++.+.+ ..+
T Consensus 24 ~~lv~~li~~Gv~gl~~~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a 91 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAV-GTTGE-SPTL---------SHEEHKKVIEKVVDVVNG-RVQVIAGAGSNCTEEAIELSVFA 91 (289)
T ss_dssp HHHHHHHHHTTCSEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 567788888899888765 32110 0000 000012455556666543 6999865554 444443 234
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+....+.++.
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f-~~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 92 EDVGADAVLSITPYYNKPTQEGLRKHF-GKVAESINLP-IVLYN---VPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHH-HHHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CccccCcCCCHHHHHHHH
Confidence 458999999999998642 11122223 3344444433 23443 133333345555555543
No 371
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=69.26 E-value=6.3 Score=33.39 Aligned_cols=46 Identities=20% Similarity=0.175 Sum_probs=35.5
Q ss_pred hHHHHHHhhCCCCCcEEEccCCCC-hHHHHHHHHCCCcEEEeccccccCc
Q 022271 122 LLPMVVDLIGDRDIPIIAAGGIVD-ARGYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 122 ll~~v~~~~~~~~iPViaaGGI~~-g~~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
-++.+++... + .++..+||.. +.+...++..|||.+++|+....++
T Consensus 141 e~~~ir~~~~--~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a~ 187 (215)
T 3ve9_A 141 MISRVKGDFP--D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQSA 187 (215)
T ss_dssp HHHHHHHHCT--T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTSS
T ss_pred HHHHHHHhCC--C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCCC
Confidence 4566666653 5 7889999974 3367788999999999999988864
No 372
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=69.19 E-value=11 Score=33.54 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEc-cCCCChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAA-GGIVDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaa-GGI~~g~~v~---aa 152 (300)
..+++.+++.|++.+.+. |..- +.... ...--..++..+++.+++ ++|||+. |+.++.+.+. .+
T Consensus 32 ~~lv~~li~~Gv~gl~v~-GtTG-E~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A 99 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCIL-ANFS-EQFAI---------TDDERDVLTRTILEHVAG-RVPVIVTTSHYSTQVCAARSLRA 99 (309)
T ss_dssp HHHHHHHHHTTCSCEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-CcccC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCchHHHHHHHHHHH
Confidence 456778888899887765 3211 00000 000012345556666543 6999986 5555555544 44
Q ss_pred HHCCCcEEEecccccc----CcccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVA----SEESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~----t~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.. ..+...-..|+ .|.++.+.- ..++. .|+ .+.-+..+.+.++.
T Consensus 100 ~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~-~va~a~~lP-iilYn---~P~-tg~~l~~~~~~~La 161 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYHGATFRVPEAQIFEFYA-RVSDAIAIP-IMVQD---APA-SGTALSAPFLARMA 161 (309)
T ss_dssp HHTTCSEEEECCSCBTTTBCCCHHHHHHHHH-HHHHHCSSC-EEEEE---CGG-GCCCCCHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCccCCCCCHHHHHHHHH-HHHHhcCCC-EEEEe---CCC-CCCCCCHHHHHHHH
Confidence 5699999999999872 22223333344 344444433 23443 233 34445555665554
No 373
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=69.19 E-value=12 Score=33.64 Aligned_cols=112 Identities=12% Similarity=0.020 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCCC---cHHHHHHHHHcCCcE-E--EEcCCCCcH---HHHHHHHHCCCe--Ee
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAFP---HNENIKAILSEKVAV-L--QVSWGEYSE---ELVLEAHSAGVK--VV 114 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~---~~~~~~~~~e~g~~~-i--~~~~G~~~~---~~v~~~~~~G~~--v~ 114 (300)
.+++++.+..++..+. .--.+++-.... +.+.++.+.+.++++ + ..+.+-.++ .+.+.+.+.|+. .+
T Consensus 138 ~~~~~~~~~a~~~~~~--Gf~~iKik~g~~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~i 215 (345)
T 2zad_A 138 DTVENRVKEAKKIFEE--GFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVY 215 (345)
T ss_dssp CCHHHHHHHHHHHHHT--TCSEEEEECCSCHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEE
T ss_pred CCHHHHHHHHHHHHHc--CcCEEEEeecCCHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeee
Confidence 4777776666665543 222344333222 234566666665543 2 223232223 455566778888 77
Q ss_pred ecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEe
Q 022271 115 PQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICL 162 (300)
Q Consensus 115 ~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~ 162 (300)
.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++
T Consensus 216 E~P~~~~~~~~~~~l~~~~---~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 216 EQPVRREDIEGLKFVRFHS---PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp ECCSCTTCHHHHHHHHHHS---SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred eCCCCcccHHHHHHHHHhC---CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 641 2355677787776 79999999999999999999876 789998
No 374
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=69.17 E-value=24 Score=32.68 Aligned_cols=117 Identities=10% Similarity=-0.010 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecCCC------------cHHHHHHHHHc-CCcE---EEEcCCCCcH---HHHHH
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLAFP------------HNENIKAILSE-KVAV---LQVSWGEYSE---ELVLE 105 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~------------~~~~~~~~~e~-g~~~---i~~~~G~~~~---~~v~~ 105 (300)
..+++++.+..++..+. +--.+++....+ +.+.++.+.+. |+++ +..+.+-.++ .+.+.
T Consensus 123 ~~~~e~~~~~a~~~~~~--G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~ 200 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAG--GFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKE 200 (405)
T ss_dssp CSSHHHHHHHHHHHHHT--TCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc--CCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHH
Confidence 35788777777776553 233455533211 12345555543 3332 2223232223 34455
Q ss_pred HHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 106 AHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 106 ~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..
T Consensus 201 L~~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~ 262 (405)
T 3rr1_A 201 LEPYRPLFIEEPVLAEQAETYARLAAHT---HLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSH 262 (405)
T ss_dssp HGGGCCSCEECSSCCSSTHHHHHHHTTC---SSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTT
T ss_pred HHhcCCCEEECCCCcccHHHHHHHHhcC---CCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhh
Confidence 667787777641 2455677777765 79999999999999999999875 7888885443
No 375
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=69.11 E-value=14 Score=27.36 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=48.0
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+.. .+... .+.++.++++.. .++|||+-.+-.+......++.
T Consensus 36 ~~~~a~~~l~~~~~dlvi~d~-~~~~~-----------------g~~~~~~l~~~~--~~~pii~ls~~~~~~~~~~~~~ 95 (142)
T 2qxy_A 36 NEQEAFTFLRREKIDLVFVDV-FEGEE-----------------SLNLIRRIREEF--PDTKVAVLSAYVDKDLIINSVK 95 (142)
T ss_dssp SHHHHHHHHTTSCCSEEEEEC-TTTHH-----------------HHHHHHHHHHHC--TTCEEEEEESCCCHHHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeC-CCCCc-----------------HHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHH
Confidence 345566666677788888776 54211 234555666543 2699999999999999999999
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.||+++..
T Consensus 96 ~g~~~~l~ 103 (142)
T 2qxy_A 96 AGAVDYIL 103 (142)
T ss_dssp HTCSCEEE
T ss_pred CCcceeEe
Confidence 99997643
No 376
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=68.88 E-value=12 Score=32.76 Aligned_cols=48 Identities=25% Similarity=0.355 Sum_probs=41.2
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl 167 (300)
.|.+..+.++++++ ++||+-===|-|+.++..+..+|||+|.+=.+.+
T Consensus 90 ~Gs~~~L~~vr~~v---~lPvLrKDFiid~yQI~eAr~~GADaILLI~a~L 137 (258)
T 4a29_A 90 NGSYETLRKIASSV---SIPILMSDFIVKESQIDDAYNLGADTVLLIVKIL 137 (258)
T ss_dssp CCCHHHHHHHHTTC---SSCEEEESCCCSHHHHHHHHHHTCSEEEEEGGGS
T ss_pred CCCHHHHHHHHHhc---CCCEeeccccccHHHHHHHHHcCCCeeehHHhhc
Confidence 46778899999887 8999998889999999999999999998754444
No 377
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=68.86 E-value=28 Score=24.70 Aligned_cols=67 Identities=12% Similarity=0.135 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||.-.+-.+......++..|
T Consensus 37 ~~a~~~~~~~~~dlil~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g 97 (120)
T 1tmy_A 37 REAVEKYKELKPDIVTMDITMPE-----------------MNGIDAIKEIMKID--PNAKIIVCSAMGQQAMVIEAIKAG 97 (120)
T ss_dssp HHHHHHHHHHCCSEEEEECSCGG-----------------GCHHHHHHHHHHHC--TTCCEEEEECTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCC-----------------CcHHHHHHHHHhhC--CCCeEEEEeCCCCHHHHHHHHHhC
Confidence 44555555566677666654431 12345566666543 268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 98 ~~~~l~ 103 (120)
T 1tmy_A 98 AKDFIV 103 (120)
T ss_dssp CCEEEE
T ss_pred cceeEe
Confidence 998654
No 378
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=68.86 E-value=15 Score=27.41 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .+|||.-.+-.+...+..++..|
T Consensus 38 ~~al~~~~~~~~dlvllD~~l~~-----------------~~g~~l~~~l~~~~---~~~ii~ls~~~~~~~~~~~~~~g 97 (136)
T 2qzj_A 38 EEAIGKIFSNKYDLIFLEIILSD-----------------GDGWTLCKKIRNVT---TCPIVYMTYINEDQSILNALNSG 97 (136)
T ss_dssp HHHHHHHHHCCCSEEEEESEETT-----------------EEHHHHHHHHHTTC---CCCEEEEESCCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCC-----------------CCHHHHHHHHccCC---CCCEEEEEcCCCHHHHHHHHHcC
Confidence 44555555556666666544321 11245566666532 68999998889999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|+++..
T Consensus 98 a~~~l~ 103 (136)
T 2qzj_A 98 GDDYLI 103 (136)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 998754
No 379
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=68.75 E-value=11 Score=33.42 Aligned_cols=81 Identities=15% Similarity=0.042 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+... |...+ .... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 27 ~~lv~~li~~Gv~gl~~~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A 94 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLF-GTTGE-GCSV---------GSRERQAILSSFIAAGIA-PSRIVTGVLVDSIEDAADQSAEA 94 (294)
T ss_dssp HHHHHHHHHTTCSEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHTTCC-GGGEEEEECCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCCccHHHHHHHHHHH
Confidence 466788888899888765 32110 0000 000012455556666543 68998655543433332 34
Q ss_pred HHCCCcEEEeccccccC
Q 022271 153 LSLGAQGICLGTRFVAS 169 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t 169 (300)
-.+|||++++-++|...
T Consensus 95 ~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 95 LNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHTTCSEEEECCCCSSC
T ss_pred HhcCCCEEEEcCCcCCC
Confidence 45899999999999865
No 380
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=68.73 E-value=47 Score=29.31 Aligned_cols=88 Identities=11% Similarity=0.082 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCcEEEEcC--CCCcHHH---HHHHHHCCC---eEeec-----c----ChhchHHHHHHhhCCCCCcEEE
Q 022271 77 NENIKAILSEKVAVLQVSW--GEYSEEL---VLEAHSAGV---KVVPQ-----D----GLISLLPMVVDLIGDRDIPIIA 139 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~--G~~~~~~---v~~~~~~G~---~v~~~-----~----~~~~ll~~v~~~~~~~~iPVia 139 (300)
.+.++.+...+-+++.... +. +.++ ++.++..|- .+++. . -.+..++.+++... ++||+.
T Consensus 122 ~~Ll~~~a~~~kPV~lk~G~~~t-~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~--~~pV~~ 198 (292)
T 1o60_A 122 TDLVEAMAKTGAVINVKKPQFLS-PSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASK--GSPVIF 198 (292)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSC-GGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTT--SCCEEE
T ss_pred HHHHHHHHcCCCcEEEeCCCCCC-HHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCC--CCCEEE
Confidence 4466666666666665542 22 2333 344455553 33332 1 24556777776641 589999
Q ss_pred -----------ccCCCCh------HHHHHHHHCCCcEEEeccccc
Q 022271 140 -----------AGGIVDA------RGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 140 -----------aGGI~~g------~~v~aal~lGAdgV~~GT~fl 167 (300)
.|+-..| .-..++.++||+|+++=+-|-
T Consensus 199 D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~~ 243 (292)
T 1o60_A 199 DVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHPN 243 (292)
T ss_dssp EHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEESS
T ss_pred ECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecCC
Confidence 3444455 233477889999999977763
No 381
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=68.49 E-value=37 Score=29.93 Aligned_cols=124 Identities=15% Similarity=0.118 Sum_probs=62.8
Q ss_pred HHHHHHHhCCceEEecCCCCCCH------HHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCc
Q 022271 26 ELVAAVANAGGLGLLRAPDWEAP------DYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYS 99 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~~~~~------~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~ 99 (300)
+++.+..++|. ..|=.+.+.+| ....+.++.+++..+.|+.+-+ +..+.++.+++.|++.|.+..+..+
T Consensus 34 ~i~~~L~~~Gv-~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~----~~~~~i~~a~~aG~~~v~i~~~~s~ 108 (302)
T 2ftp_A 34 RLVDDLSAAGL-DYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA----PNLKGFEAALESGVKEVAVFAAASE 108 (302)
T ss_dssp HHHHHHHHTTC-SEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC----CSHHHHHHHHHTTCCEEEEEEESCH
T ss_pred HHHHHHHHcCc-CEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe----CCHHHHHHHHhCCcCEEEEEEecCH
Confidence 66777778874 22211111111 1122333444333344554322 4678899999999998876433211
Q ss_pred ------------------HHHHHHHHHCCCeEeec-----------cChhchHHHHHHhhCC---CCCcEEEccCCCChH
Q 022271 100 ------------------EELVLEAHSAGVKVVPQ-----------DGLISLLPMVVDLIGD---RDIPIIAAGGIVDAR 147 (300)
Q Consensus 100 ------------------~~~v~~~~~~G~~v~~~-----------~~~~~ll~~v~~~~~~---~~iPViaaGGI~~g~ 147 (300)
.+.++.+|+.|..|-.. ......+-++.+.+.+ ..+-+-=.=|+.++.
T Consensus 109 ~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~ 188 (302)
T 2ftp_A 109 AFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAG 188 (302)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHH
Confidence 45667778889888421 0122333333332111 112233345677887
Q ss_pred HHHHHHH
Q 022271 148 GYVAALS 154 (300)
Q Consensus 148 ~v~aal~ 154 (300)
++...+.
T Consensus 189 ~~~~lv~ 195 (302)
T 2ftp_A 189 ATRRLIE 195 (302)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 382
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=68.39 E-value=7.8 Score=35.79 Aligned_cols=63 Identities=10% Similarity=-0.034 Sum_probs=46.5
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+
T Consensus 239 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 305 (398)
T 2pp0_A 239 MGRKMEQFNLIWIEEPLDAYDIEGHAQLAAAL---DTPIATGEMLTSFREHEQLILGNASDFVQPDAPRV 305 (398)
T ss_dssp HHHHHGGGTCSCEECCSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHHHcCCceeeCCCChhhHHHHHHHHhhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 444455667766654 12456677787776 79999999999999999999986 78888854443
No 383
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.38 E-value=8.1 Score=34.18 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCCcH---HHHHHHHHcCCcEEEEc
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPHN---ENIKAILSEKVAVLQVS 94 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~---~~~~~~~e~g~~~i~~~ 94 (300)
+++.+.+.++++|+.++.|+.+++......+ +.++.+.+.|++.|.++
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 7889999999999988999999987654322 33677788899998764
No 384
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=68.06 E-value=19 Score=31.89 Aligned_cols=124 Identities=13% Similarity=0.112 Sum_probs=64.4
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+... |...+ .... ...--..++..+++.+++.++|||+.=|=.+-++.. .+
T Consensus 31 ~~lv~~li~~Gv~gl~v~-GttGE-~~~L---------s~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPV-GTTGE-SATL---------THEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp HHHHHHHHHTTCCEEECS-STTTT-GGGS---------CHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 566788888899888765 32110 0000 000012455556666542158998865543444433 44
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-. |=+.|.++.+.-+ .++. .|++.+.-+..+.+.++.
T Consensus 100 ~~~Gadavlv~~P~y~~~s~~~l~~-~f~~va~a~~lPi-ilYn---~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 100 KEHGADGILSVAPYYNKPTQQGLYE-HYKAIAQSVDIPV-LLYN---VPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHH-HHHHHHHHCSSCE-EEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHH-HHHHHHHhCCCCE-EEEe---CchhhCcCCCHHHHHHHH
Confidence 569999999999988753 111222 2333444444332 3443 234334445555555543
No 385
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=68.03 E-value=16 Score=33.15 Aligned_cols=118 Identities=13% Similarity=0.008 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCCCc---HHHHHHHHHc-CCc--EE-EEcCCCCcH---HHHHHHHHCCCeEee
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAFPH---NENIKAILSE-KVA--VL-QVSWGEYSE---ELVLEAHSAGVKVVP 115 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~---~~~~~~~~e~-g~~--~i-~~~~G~~~~---~~v~~~~~~G~~v~~ 115 (300)
.+++++.+..++..+.. .-.+++-..... .+.++.+.+. +++ +. ..+.+-.+. .+.+.+.+.|+..+.
T Consensus 139 ~~~~~~~~~a~~~~~~G--~~~~K~K~G~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 216 (356)
T 3ro6_B 139 KPVEETLAEAREHLALG--FRVLKVKLCGDEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIE 216 (356)
T ss_dssp CCHHHHHHHHHHHHHTT--CCEEEEECCSCHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEE
T ss_pred CCHHHHHHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 46777666666655431 223333222221 2334444443 333 21 223222222 344556677777765
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC--CcEEEecccccc
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG--AQGICLGTRFVA 168 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG--AdgV~~GT~fl~ 168 (300)
+. ..+..+.++++.+ ++||.+.+-+.+..++..++..| +|.|++-...+.
T Consensus 217 qP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~G 271 (356)
T 3ro6_B 217 QPFPAGRTDWLRALPKAI---RRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCG 271 (356)
T ss_dssp CCSCTTCHHHHHTSCHHH---HHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHC
T ss_pred CCCCCCcHHHHHHHHhcC---CCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccC
Confidence 41 1344555566555 69999999999999999999976 899999765554
No 386
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=67.95 E-value=15 Score=32.85 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
...++.+++.|++.+.+. |... +.... ...--..++..+++.+++ ++|||+.-|- +-+++. .+
T Consensus 36 ~~lv~~li~~Gv~Gl~v~-GtTG-E~~~L---------s~eEr~~v~~~~v~~~~g-rvpViaGvg~-~t~~ai~la~~A 102 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPC-GNTS-EFYAL---------SLEEAKEEVRRTVEYVHG-RALVVAGIGY-ATSTAIELGNAA 102 (316)
T ss_dssp HHHHHHHHTTTCCEECTT-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSEEEEEECS-SHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-cccc-CcccC---------CHHHHHHHHHHHHHHhCC-CCcEEEEeCc-CHHHHHHHHHHH
Confidence 456777888888888664 3210 00000 000012455556666643 6999988664 555533 34
Q ss_pred HHCCCcEEEeccccccC
Q 022271 153 LSLGAQGICLGTRFVAS 169 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t 169 (300)
-.+|||+|++-++|...
T Consensus 103 ~~~Gadavlv~~P~y~~ 119 (316)
T 3e96_A 103 KAAGADAVMIHMPIHPY 119 (316)
T ss_dssp HHHTCSEEEECCCCCSC
T ss_pred HhcCCCEEEEcCCCCCC
Confidence 45899999999998753
No 387
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=67.93 E-value=26 Score=24.81 Aligned_cols=66 Identities=14% Similarity=0.131 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..++++.+....|. ..-+.++.++++.- ++|||.-.+-.+......++..|
T Consensus 35 ~~a~~~~~~~~~dlvl~D~~l~~-----------------~~g~~~~~~l~~~~---~~~ii~~s~~~~~~~~~~~~~~g 94 (120)
T 2a9o_A 35 REALEQFEAEQPDIIILDLMLPE-----------------IDGLEVAKTIRKTS---SVPILMLSAKDSEFDKVIGLELG 94 (120)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSS-----------------SCHHHHHHHHHHHC---CCCEEEEESCCSHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEEeccCCC-----------------CCHHHHHHHHHhCC---CCCEEEEecCCchHHHHHHHhCC
Confidence 45555555666777776654431 12245566666532 68999888888888899999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 95 ~~~~l~ 100 (120)
T 2a9o_A 95 ADDYVT 100 (120)
T ss_dssp CSEEEE
T ss_pred HhheEe
Confidence 998654
No 388
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=67.89 E-value=9.7 Score=35.17 Aligned_cols=64 Identities=11% Similarity=-0.007 Sum_probs=47.1
Q ss_pred HHHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 101 ELVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
++.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+
T Consensus 236 ~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 303 (410)
T 2gl5_A 236 QFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRST---TIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLC 303 (410)
T ss_dssp HHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHC---SSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHhcCCCeEECCCChhhHHHHHHHHhhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 3444455677776654 12456677788776 79999999999999999999986 68888854333
No 389
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=67.77 E-value=7.1 Score=36.05 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=47.9
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHH-hhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVD-LIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~-~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+.+.+.+.|+..+.+. ..+..+.++++ .+ ++||++.+.+.+..++..++..| +|.|++-...+..
T Consensus 214 ~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 283 (401)
T 2hzg_A 214 RLPTLDAAGVLWLEEPFDAGALAAHAALAGRGA---RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGG 283 (401)
T ss_dssp THHHHHHTTCSEEECCSCTTCHHHHHHHHTTCC---SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTS
T ss_pred HHHHHHhcCCCEEECCCCccCHHHHHHHHhhCC---CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCC
Confidence 4455667788777641 24556667776 55 79999999999999999999875 8999996554443
No 390
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=67.70 E-value=5.6 Score=36.23 Aligned_cols=61 Identities=13% Similarity=0.204 Sum_probs=44.7
Q ss_pred HHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccccC
Q 022271 106 AHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVAS 169 (300)
Q Consensus 106 ~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~t 169 (300)
+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+..
T Consensus 209 l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 273 (369)
T 2p8b_A 209 LGHLNIDWIEQPVIADDIDAMAHIRSKT---DLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGG 273 (369)
T ss_dssp STTSCCSCEECCBCTTCHHHHHHHHHTC---CSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred HHhCCCcEEECCCCcccHHHHHHHHHhC---CCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCC
Confidence 34456666543 12345667777766 79999999999999999999875 8999996555443
No 391
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=67.57 E-value=19 Score=31.51 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=59.3
Q ss_pred HHHHHHhhcCCcEEeeeecCCCc----HHHHHHHHHcCCcEEEEcC--CCC--cHHHHHH----HHHCCCeEeeccChhc
Q 022271 54 LIRKTRSLTERPFGVGVVLAFPH----NENIKAILSEKVAVLQVSW--GEY--SEELVLE----AHSAGVKVVPQDGLIS 121 (300)
Q Consensus 54 ~i~~~r~~~~~P~gvnl~~~~~~----~~~~~~~~e~g~~~i~~~~--G~~--~~~~v~~----~~~~G~~v~~~~~~~~ 121 (300)
..++.|+.-.+.+-.=++.-+|+ .+.++.+.+. +|+|.+.. ..| ..++++. ..+.|+.+ ...+.
T Consensus 6 ~f~~~~~~~~~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~---~~~~~ 81 (271)
T 1ujp_A 6 AFAKARSEGRAALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSV---QGALE 81 (271)
T ss_dssp HHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCH---HHHHH
T ss_pred HHHHHHHcCCceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCH---HHHHH
Confidence 34444443233332233344554 3456677777 99998742 222 1133433 23456322 33578
Q ss_pred hHHHHHHhhCCCCCcEEEccCCCC-------hHHHHHHHHCCCcEEEecccc
Q 022271 122 LLPMVVDLIGDRDIPIIAAGGIVD-------ARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 122 ll~~v~~~~~~~~iPViaaGGI~~-------g~~v~aal~lGAdgV~~GT~f 166 (300)
++.++++.+ ++||+.- +..+ .+-+..+...|+||+.+.-.-
T Consensus 82 ~v~~ir~~~---~~Pii~m-~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~ 129 (271)
T 1ujp_A 82 LVREVRALT---EKPLFLM-TYLNPVLAWGPERFFGLFKQAGATGVILPDLP 129 (271)
T ss_dssp HHHHHHHHC---CSCEEEE-CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCC
T ss_pred HHHHHHhcC---CCCEEEE-ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCC
Confidence 888888875 7999985 3223 234566777899999986443
No 392
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=67.57 E-value=20 Score=30.22 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=48.9
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|.. .-+.++.++++. .++|||+-.+-.+...+..++.+
T Consensus 70 ~~~al~~~~~~~~DlvllD~~lp~~-----------------~G~~l~~~lr~~---~~~~iI~lt~~~~~~~~~~a~~~ 129 (249)
T 3q9s_A 70 AMNGLIKAREDHPDLILLDLGLPDF-----------------DGGDVVQRLRKN---SALPIIVLTARDTVEEKVRLLGL 129 (249)
T ss_dssp HHHHHHHHHHSCCSEEEEECCSCHH-----------------HHHHHHHHHHTT---CCCCEEEEESCCSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCCC-----------------CHHHHHHHHHcC---CCCCEEEEECCCCHHHHHHHHHC
Confidence 3556666667777777777665421 124566666653 27999999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||++...
T Consensus 130 Ga~~yl~ 136 (249)
T 3q9s_A 130 GADDYLI 136 (249)
T ss_dssp TCSEEEE
T ss_pred CCcEEEE
Confidence 9998765
No 393
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=67.49 E-value=24 Score=30.99 Aligned_cols=81 Identities=22% Similarity=0.306 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+... |..- +.... ...--..++..+++.+++ ++|||+.=|=.+-++.. .+
T Consensus 25 ~~lv~~li~~Gv~gl~~~-GttG-E~~~L---------s~~Er~~v~~~~~~~~~g-r~pvi~Gvg~~~t~~ai~la~~a 92 (291)
T 3a5f_A 25 SELIEWHIKSKTDAIIVC-GTTG-EATTM---------TETERKETIKFVIDKVNK-RIPVIAGTGSNNTAASIAMSKWA 92 (291)
T ss_dssp HHHHHHHHHTTCCEEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-ChhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEeCCcccHHHHHHHHHHH
Confidence 456777778888887765 3210 00000 000012455556666543 68998765544444433 34
Q ss_pred HHCCCcEEEeccccccC
Q 022271 153 LSLGAQGICLGTRFVAS 169 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t 169 (300)
-.+|||++++-++|...
T Consensus 93 ~~~Gadavlv~~P~y~~ 109 (291)
T 3a5f_A 93 ESIGVDGLLVITPYYNK 109 (291)
T ss_dssp HHTTCSEEEEECCCSSC
T ss_pred HhcCCCEEEEcCCCCCC
Confidence 55899999999999865
No 394
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=67.47 E-value=67 Score=28.45 Aligned_cols=142 Identities=16% Similarity=0.165 Sum_probs=77.8
Q ss_pred HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCC-cEEEEc
Q 022271 25 PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKV-AVLQVS 94 (300)
Q Consensus 25 ~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~-~~i~~~ 94 (300)
.+++.-..++|.=|++.+|. .++.++-++.++.+.+.. +.|+-++.-..... .+..+.+.+.|+ +.+.+.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc
Confidence 46666677788777765432 357788888888877754 34765654432211 334555666665 766542
Q ss_pred C---CCCc-HHHHHHHH---H-CCCeEee----------------------------ccC-hhchHHHHHHhhCCCCCcE
Q 022271 95 W---GEYS-EELVLEAH---S-AGVKVVP----------------------------QDG-LISLLPMVVDLIGDRDIPI 137 (300)
Q Consensus 95 ~---G~~~-~~~v~~~~---~-~G~~v~~----------------------------~~~-~~~ll~~v~~~~~~~~iPV 137 (300)
. ..|+ +.+++..+ + .++.++. ..+ .+..+.++.+... .+..|
T Consensus 111 ~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssd~~~~~~~~~~~~-~~f~v 189 (311)
T 3h5d_A 111 VPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNIIGVKECTSLANMAYLIEHKP-EEFLI 189 (311)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECSCHHHHHHHHHHCC-SSCEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCCCHHHHHHHHHHcC-CCEEE
Confidence 1 1111 22222221 1 2333331 122 2333444444432 13444
Q ss_pred EEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 138 IAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 138 iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
+ .| +...+..++.+|++|++-|+..++.++
T Consensus 190 ~-~G---~d~~~l~~l~~Ga~G~is~~an~~P~~ 219 (311)
T 3h5d_A 190 Y-TG---EDGDAFHAMNLGADGVISVASHTNGDE 219 (311)
T ss_dssp E-EC---CGGGHHHHHHHTCCEEEESTHHHHHHH
T ss_pred E-EC---cHHHHHHHHHcCCCEEEechhhhCHHH
Confidence 3 44 234577889999999999999887755
No 395
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=67.43 E-value=16 Score=32.24 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC-CCChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG-I~~g~~v~---aa 152 (300)
..+++.+++.|++.+... |..- +.... ...--..++..+++.+++ ++|||+.=| .++.+.+. .+
T Consensus 24 ~~lv~~li~~Gv~gl~~~-GttG-E~~~L---------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A 91 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPC-GTTG-ESPTL---------SKSEHEQVVEITIKTANG-RVPVIAGAGSNSTAEAIAFVRHA 91 (292)
T ss_dssp HHHHHHHHHTTCSEEETT-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-ChhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHH
Confidence 456777778888887654 3210 00000 000012345556666543 688876544 44444433 34
Q ss_pred HHCCCcEEEeccccccC
Q 022271 153 LSLGAQGICLGTRFVAS 169 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t 169 (300)
-.+|||+|++-++|...
T Consensus 92 ~~~Gadavlv~~P~y~~ 108 (292)
T 2vc6_A 92 QNAGADGVLIVSPYYNK 108 (292)
T ss_dssp HHTTCSEEEEECCCSSC
T ss_pred HHcCCCEEEEcCCCCCC
Confidence 55899999999999864
No 396
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=67.39 E-value=13 Score=33.65 Aligned_cols=118 Identities=18% Similarity=0.150 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCC-Cc---HHHHHHHHHc-CCcE-EE--EcCCCCcH---HHHHHHHH--CCCe
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAF-PH---NENIKAILSE-KVAV-LQ--VSWGEYSE---ELVLEAHS--AGVK 112 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~-~~---~~~~~~~~e~-g~~~-i~--~~~G~~~~---~~v~~~~~--~G~~ 112 (300)
.+++++.+..++..+.. --.+++-... .. .+.++.+.+. ++++ +. .+.+-.++ ++.+.+.+ .|+.
T Consensus 139 ~~~~~~~~~a~~~~~~G--f~~iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~ 216 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQG--FQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIE 216 (366)
T ss_dssp CCHHHHHHHHHHHHHHT--CCEEEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHcC--CCeEEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCce
Confidence 36777666665554431 1233332222 11 2344444442 3332 22 22222222 45556667 7777
Q ss_pred Eeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 113 VVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 113 v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+.+. ..+..+.++++.+ ++||++.+-+.+..++..++..| +|.|++--..+.
T Consensus 217 ~iEqP~~~~d~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 273 (366)
T 1tkk_A 217 LVEQPVHKDDLAGLKKVTDAT---DTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAG 273 (366)
T ss_dssp EEECCSCTTCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHT
T ss_pred EEECCCCcccHHHHHHHHhhC---CCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhc
Confidence 77641 2456677787776 79999999999999999999865 799999654443
No 397
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=67.28 E-value=9.8 Score=35.44 Aligned_cols=64 Identities=8% Similarity=0.020 Sum_probs=47.8
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+-+.+..++..++..| +|.|++-...+.
T Consensus 249 ~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~G 316 (412)
T 3stp_A 249 MLPKLAPYEPRWLEEPVIADDVAGYAELNAMN---IVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVG 316 (412)
T ss_dssp HHHHHGGGCCSEEECCSCTTCHHHHHHHHHTC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHT
T ss_pred HHHHHHhcCCCEEECCCCcccHHHHHHHHhCC---CCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcC
Confidence 344555667766654 12456677777776 79999999999999999999986 789998655554
No 398
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=67.14 E-value=8 Score=36.07 Aligned_cols=64 Identities=6% Similarity=-0.175 Sum_probs=49.1
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+-+.+..++..++..| +|.|++--..+
T Consensus 238 ~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~ 305 (418)
T 3r4e_A 238 NLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHT---VTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGA 305 (418)
T ss_dssp HHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHC---CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHhhCCCEEECCCCccCHHHHHHHHhcC---CCCEEEcCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 34455667788777651 2466778888887 89999999999999999999987 78888864444
No 399
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=67.12 E-value=20 Score=27.04 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ...+.++.++++.. .++|||+-.+-.+......++..|
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~~~~~~~g 101 (154)
T 2rjn_A 41 LDALEALKGTSVQLVISDMRMPE-----------------MGGEVFLEQVAKSY--PDIERVVISGYADAQATIDAVNRG 101 (154)
T ss_dssp HHHHHHHTTSCCSEEEEESSCSS-----------------SCHHHHHHHHHHHC--TTSEEEEEECGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCEEEEecCCCC-----------------CCHHHHHHHHHHhC--CCCcEEEEecCCCHHHHHHHHhcc
Confidence 44455555555666666544321 12345666666643 269999999999999999999998
Q ss_pred -CcEEEe
Q 022271 157 -AQGICL 162 (300)
Q Consensus 157 -AdgV~~ 162 (300)
|+++..
T Consensus 102 ~~~~~l~ 108 (154)
T 2rjn_A 102 KISRFLL 108 (154)
T ss_dssp CCSEEEE
T ss_pred chheeee
Confidence 887754
No 400
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=67.11 E-value=8.2 Score=35.59 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=48.0
Q ss_pred HHHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 101 ELVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
++.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 227 ~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 295 (403)
T 2ox4_A 227 QFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKI---DIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCG 295 (403)
T ss_dssp HHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTC---CSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHT
T ss_pred HHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccC
Confidence 3444555677777654 12456677788776 79999999999999999999986 789988544443
No 401
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=66.70 E-value=8.5 Score=35.47 Aligned_cols=63 Identities=14% Similarity=0.174 Sum_probs=44.2
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 208 ~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 274 (397)
T 2qde_A 208 TIRALEKYNLSKIEQPLPAWDLDGMARLRGKV---ATPIYADESAQELHDLLAIINKGAADGLMIKTQKA 274 (397)
T ss_dssp HHHHHGGGCCSCEECCSCTTCHHHHHHHHTTC---SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHhCCCCEEECCCChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEecccc
Confidence 3344455566555431 1345566676665 79999999999999999999875 89999854443
No 402
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=66.63 E-value=64 Score=28.08 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHc--CCcEEE-EcCCCCc--HHHHHHHHHCCCeEee
Q 022271 48 PDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSE--KVAVLQ-VSWGEYS--EELVLEAHSAGVKVVP 115 (300)
Q Consensus 48 ~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~--g~~~i~-~~~G~~~--~~~v~~~~~~G~~v~~ 115 (300)
.+.+...|+.+++.++.|+.|.-. ..+.++.++++ |+++|. ++.+ .. ++..+.+++.|+.++.
T Consensus 63 ~~rv~~vi~~l~~~~~~pisIDT~----~~~v~~aal~a~~Ga~iINdvs~~-~d~~~~~~~~~a~~~~~vv~ 130 (271)
T 2yci_X 63 VRVMEWLVKTIQEVVDLPCCLDST----NPDAIEAGLKVHRGHAMINSTSAD-QWKMDIFFPMAKKYEAAIIG 130 (271)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECS----CHHHHHHHHHHCCSCCEEEEECSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCC----CHHHHHHHHHhCCCCCEEEECCCC-ccccHHHHHHHHHcCCCEEE
Confidence 566777788888777888876544 57788899998 999996 5543 23 4566667777877764
No 403
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=66.63 E-value=15 Score=33.23 Aligned_cols=123 Identities=13% Similarity=0.169 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v~---aa 152 (300)
..+++.+++.|++.|.+. |..-+ .... ...--..++..+++.+++ ++|||+.=|= ++.+.+. .+
T Consensus 55 ~~lv~~li~~Gv~Gl~v~-GtTGE-~~~L---------s~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~A 122 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFL-GSGGE-FSQL---------GAEERKAIARFAIDHVDR-RVPVLIGTGGTNARETIELSQHA 122 (343)
T ss_dssp HHHHHHHHHTTCSCEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-SSCEEEECCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeC-ccccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 456777888888888765 32110 0000 000012445556666543 6899876554 4444332 34
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||+|++-++|.... +...-..| +.|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 123 ~~~Gadavlv~~P~Y~~~s~~~l~~~f-~~VA~a~~lP-iilYn---~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 123 QQAGADGIVVINPYYWKVSEANLIRYF-EQVADSVTLP-VMLYN---FPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHTCSEEEEECCSSSCCCHHHHHHHH-HHHHHTCSSC-EEEEE---CHHHHSSCCCHHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHH-HHHHHhcCCC-EEEEe---CchhcCcCCCHHHHHHHH
Confidence 558999999999998643 11122223 3444444433 23443 133333445555555543
No 404
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=66.43 E-value=32 Score=30.89 Aligned_cols=130 Identities=16% Similarity=0.268 Sum_probs=74.1
Q ss_pred HhCCceEEecCCCCCCHHH---HHHHHHHHHhh---cCC----cEEeeeecCCCc-HHHHHHHHHcCCcEEEEcCCCCcH
Q 022271 32 ANAGGLGLLRAPDWEAPDY---LRDLIRKTRSL---TER----PFGVGVVLAFPH-NENIKAILSEKVAVLQVSWGEYSE 100 (300)
Q Consensus 32 s~aGglG~i~~~~~~~~~~---l~~~i~~~r~~---~~~----P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~G~~~~ 100 (300)
+..|-.+++-. ...++++ .++.+++++.. .+. .+.+..+...|. ...++.+.+. ++++++ | +.
T Consensus 132 ~~~G~~~ImvP-mV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~-vD~~si--G--tn 205 (324)
T 2xz9_A 132 SAYGNVQIMYP-MISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE-VDFFSI--G--TN 205 (324)
T ss_dssp GGGSCEEEEEC-SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT-CSEEEE--C--HH
T ss_pred HhCCCCEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh-CcEEEE--C--HH
Confidence 33588887643 3468888 55666655541 111 233444544332 3345666555 888877 4 34
Q ss_pred HHHHHHHH-----CCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCC-ChHHHHHHHHCCCcEEEeccccc
Q 022271 101 ELVLEAHS-----AGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIV-DARGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~-----~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~-~g~~v~aal~lGAdgV~~GT~fl 167 (300)
++.+..-. .++....+ ...+.++..+.++.+..++|+-..|.+. |++.+...+.+|.+++.|+..-+
T Consensus 206 DLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG~~~~si~p~~i 281 (324)
T 2xz9_A 206 DLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMAGDPLAAVILLGLGLDEFSMSATSI 281 (324)
T ss_dssp HHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGGCHHHHHHHHHHTCCEEEECGGGH
T ss_pred HHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccCCCHHHHHHHHHCCCCEEEEChhHH
Confidence 55543211 01100011 2245566666655433378987777775 99999999999999987765433
No 405
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=66.41 E-value=11 Score=31.71 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=41.6
Q ss_pred HHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEE-------ccCCC---ChHHHHHHHHCCCcEEEecccccc
Q 022271 100 EELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIA-------AGGIV---DARGYVAALSLGAQGICLGTRFVA 168 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPVia-------aGGI~---~g~~v~aal~lGAdgV~~GT~fl~ 168 (300)
.++++.+.+.|+..++.. ....+.++++.+ ++|++. .+++. +.+.+..++..|||.|.+++....
T Consensus 39 ~~~a~~~~~~G~~~i~~~-~~~~i~~i~~~~---~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~ 113 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN-SVRDIKEIQAIT---DLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRD 113 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE-SHHHHHHHHTTC---CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSC
T ss_pred HHHHHHHHHCCCcEeecC-CHHHHHHHHHhC---CCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccC
Confidence 345555556666665532 234566666665 788863 23332 457888899999999999876543
No 406
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=66.38 E-value=51 Score=28.54 Aligned_cols=126 Identities=13% Similarity=0.031 Sum_probs=76.6
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeee------ecCCCcHHHHHHHHHcCCcEEEEcCCCC---c---HHHHHHHHHCCCeE
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGV------VLAFPHNENIKAILSEKVAVLQVSWGEY---S---EELVLEAHSAGVKV 113 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl------~~~~~~~~~~~~~~e~g~~~i~~~~G~~---~---~~~v~~~~~~G~~v 113 (300)
++.+.|++.|+-.++.- -++.-+- ......+++++.|.+.|.++|.+|-|.. . ..+|+.+++.|.+|
T Consensus 52 ~~~~~l~eki~l~~~~g-V~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v 130 (251)
T 1qwg_A 52 IDRDVVKEKINYYKDWG-IKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMV 130 (251)
T ss_dssp SCHHHHHHHHHHHHTTT-CEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEE
T ss_pred cCHHHHHHHHHHHHHcC-CeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEE
Confidence 56778888888888752 2221111 0112347889999999999999987753 2 35777788889888
Q ss_pred eeccChhchHHHHHHhhCCCCCcEEEccCCCChHH----HHHHHHCCCcEEEeccc------cccCcccCCCHHHHHHHH
Q 022271 114 VPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARG----YVAALSLGAQGICLGTR------FVASEESYAHPEYKRKLV 183 (300)
Q Consensus 114 ~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~----v~aal~lGAdgV~~GT~------fl~t~Es~~~~~~k~~i~ 183 (300)
..-.|--.- ...+..++.. +.+.|.+||+-|++=.| =++-..-......-+.|+
T Consensus 131 ~~EvG~k~~----------------~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~ 194 (251)
T 1qwg_A 131 LTEVGKKMP----------------DKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLA 194 (251)
T ss_dssp EEEECCSSH----------------HHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHH
T ss_pred eeeccccCC----------------cccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHH
Confidence 764331000 0112333333 45678899999999655 333333344555556666
Q ss_pred cCCCc
Q 022271 184 EMDKT 188 (300)
Q Consensus 184 ~a~~t 188 (300)
+.=+.
T Consensus 195 ~~l~~ 199 (251)
T 1qwg_A 195 KNVDI 199 (251)
T ss_dssp TTSCG
T ss_pred HhCCh
Confidence 54333
No 407
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=66.31 E-value=28 Score=28.05 Aligned_cols=67 Identities=16% Similarity=0.072 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||.-.+-.+...+..++..|
T Consensus 41 ~~al~~~~~~~~dlvllD~~lp~-----------------~~g~~~~~~lr~~~--~~~~ii~ls~~~~~~~~~~~~~~G 101 (215)
T 1a04_A 41 EQGIELAESLDPDLILLDLNMPG-----------------MNGLETLDKLREKS--LSGRIVVFSVSNHEEDVVTALKRG 101 (215)
T ss_dssp HHHHHHHHHHCCSEEEEETTSTT-----------------SCHHHHHHHHHHSC--CCSEEEEEECCCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCC-----------------CcHHHHHHHHHHhC--CCCcEEEEECCCCHHHHHHHHHcC
Confidence 45556666667777777665431 12355666676643 268999999999999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 102 a~~~l~ 107 (215)
T 1a04_A 102 ADGYLL 107 (215)
T ss_dssp CSEEEE
T ss_pred CcEEEe
Confidence 998765
No 408
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=66.31 E-value=9.1 Score=35.78 Aligned_cols=64 Identities=5% Similarity=-0.093 Sum_probs=49.1
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.+++.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 244 ~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 311 (424)
T 3v3w_A 244 RLGKALEPYHLFWMEDAVPAENQESFKLIRQHT---TTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA 311 (424)
T ss_dssp HHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHC---CSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHHhcCCCEEECCCChHhHHHHHHHHhhC---CCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhc
Confidence 34455667788777651 2466788888876 79999999999999999999987 78888865444
No 409
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=66.25 E-value=19 Score=33.91 Aligned_cols=50 Identities=10% Similarity=0.034 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhh-------cCCcEEeeeecCCCc----HHHHHHHHH--cCCcEEEEcCCCC
Q 022271 49 DYLRDLIRKTRSL-------TERPFGVGVVLAFPH----NENIKAILS--EKVAVLQVSWGEY 98 (300)
Q Consensus 49 ~~l~~~i~~~r~~-------~~~P~gvnl~~~~~~----~~~~~~~~e--~g~~~i~~~~G~~ 98 (300)
+.+.+.+.+.+.. +..|+++|+..+... +++.+.+.. .+++.|.++.+||
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscP 220 (443)
T 1tv5_A 158 DKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSP 220 (443)
T ss_dssp HHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCT
T ss_pred HHHHHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCC
Confidence 4555555554432 256899999987521 333333332 2599999999887
No 410
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=65.98 E-value=16 Score=27.25 Aligned_cols=41 Identities=7% Similarity=0.146 Sum_probs=32.9
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++.++++.. .++|||+-.+-.+.+.+..++.+||+++..
T Consensus 83 ~~~~~~l~~~~--~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~ 123 (146)
T 4dad_A 83 LAAIEKLSRLH--PGLTCLLVTTDASSQTLLDAMRAGVRDVLR 123 (146)
T ss_dssp HHHHHHHHHHC--TTCEEEEEESCCCHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHHhC--CCCcEEEEeCCCCHHHHHHHHHhCCceeEc
Confidence 45666666653 279999999999999999999999998654
No 411
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=65.90 E-value=13 Score=28.34 Aligned_cols=41 Identities=27% Similarity=0.327 Sum_probs=32.6
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++..+++.. .++|||+-.+-.+......++..||+++..
T Consensus 63 ~~~~~~l~~~~--~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 103 (155)
T 1qkk_A 63 LALFRKILALD--PDLPMILVTGHGDIPMAVQAIQDGAYDFIA 103 (155)
T ss_dssp HHHHHHHHHHC--TTSCEEEEECGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhhC--CCCCEEEEECCCChHHHHHHHhcCCCeEEe
Confidence 45666666553 279999999999999999999999998754
No 412
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=65.75 E-value=6.9 Score=35.81 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=32.6
Q ss_pred HHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEc
Q 022271 52 RDLIRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVS 94 (300)
Q Consensus 52 ~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~ 94 (300)
.+.|+++|+.++.|+.++.+. ..+.++.+.+.|++.|+++
T Consensus 206 w~~i~~lr~~~~~PvivK~v~---~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 206 WNDLSLLQSITRLPIILKGIL---TKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp HHHHHHHHHHCCSCEEEEEEC---SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEecC---cHHHHHHHHHcCCCEEEEe
Confidence 356888888889999998873 4677888999999999874
No 413
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=65.73 E-value=9.3 Score=34.77 Aligned_cols=58 Identities=21% Similarity=0.114 Sum_probs=40.9
Q ss_pred HHCCCeEeec-cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 107 HSAGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 107 ~~~G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+.|+ .+.+ ...+..+.++++.+ ++||++.+.+.+.+++..++..| +|.|++-...+.
T Consensus 215 ~~~~i-~iE~P~~~~~~~~~l~~~~---~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 274 (371)
T 2ps2_A 215 HGLDF-ALEAPCATWRECISLRRKT---DIPIIYDELATNEMSIVKILADDAAEGIDLKISKAG 274 (371)
T ss_dssp TTCCC-EEECCBSSHHHHHHHHTTC---CSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHT
T ss_pred hhcCC-cCcCCcCCHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcC
Confidence 44566 5443 11344555566554 79999999999999999999876 799999654443
No 414
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=65.72 E-value=12 Score=35.20 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=46.1
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGT 164 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT 164 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+-+.+..++..++..| +|.|++--
T Consensus 222 ~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 222 LGQAIEPYSPLWYEEPVPPDNVGAMAQVARAV---RIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHGGGCCSEEECCSCTTCHHHHHHHHHHS---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHhhhcCCCEEECCCChhhHHHHHHHHhcc---CCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 3455666777777641 2456677888876 79999999999999999999986 78888853
No 415
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=65.55 E-value=17 Score=26.03 Aligned_cols=71 Identities=10% Similarity=0.050 Sum_probs=46.3
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+....|.. ...+.++.++++.....++|||+- +-.+......++.
T Consensus 37 ~~~~a~~~~~~~~~dlvi~d~~~~~~----------------~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~ 99 (127)
T 2gkg_A 37 DGKGSVEQIRRDRPDLVVLAVDLSAG----------------QNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLK 99 (127)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCGGG----------------CBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHST
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCC----------------CCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHHHH
Confidence 34555666666677777776544201 123455666665411137899998 8888888899999
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.|++++..
T Consensus 100 ~g~~~~l~ 107 (127)
T 2gkg_A 100 AHADEYVA 107 (127)
T ss_dssp TCCSEEEE
T ss_pred hCcchhee
Confidence 99998654
No 416
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=65.52 E-value=30 Score=25.02 Aligned_cols=69 Identities=10% Similarity=0.018 Sum_probs=42.6
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ...+.++.++++......+||+...+-.+. .+..++..
T Consensus 39 ~~~a~~~l~~~~~dlii~d~~l~~-----------------~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~-~~~~~~~~ 100 (132)
T 3lte_A 39 GFDAGIKLSTFEPAIMTLDLSMPK-----------------LDGLDVIRSLRQNKVANQPKILVVSGLDKA-KLQQAVTE 100 (132)
T ss_dssp HHHHHHHHHHTCCSEEEEESCBTT-----------------BCHHHHHHHHHTTTCSSCCEEEEECCSCSH-HHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCCCC-----------------CCHHHHHHHHHhcCccCCCeEEEEeCCChH-HHHHHHHh
Confidence 345555555666666666554321 123456666665421125778888777665 88899999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 101 g~~~~l~ 107 (132)
T 3lte_A 101 GADDYLE 107 (132)
T ss_dssp TCCEEEC
T ss_pred ChHHHhh
Confidence 9997654
No 417
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=65.39 E-value=8.6 Score=35.31 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=46.5
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 218 ~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 284 (392)
T 2poz_A 218 FCRKIGELDICFVEEPCDPFDNGALKVISEQI---PLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTA 284 (392)
T ss_dssp HHHHHGGGCEEEEECCSCTTCHHHHHHHHHHC---SSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTS
T ss_pred HHHHHHhcCCCEEECCCCcccHHHHHHHHhhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 444455667766654 12456677788776 79999999999999999999986 78888854433
No 418
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.39 E-value=23 Score=31.10 Aligned_cols=81 Identities=25% Similarity=0.248 Sum_probs=47.6
Q ss_pred HHHHHHHHH-cCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----H
Q 022271 77 NENIKAILS-EKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----A 151 (300)
Q Consensus 77 ~~~~~~~~e-~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----a 151 (300)
..+++.+++ .|++.+... |... +.... ...--..++..+++.+++ ++|||+.=|=.+-+++. .
T Consensus 27 ~~lv~~li~~~Gv~gl~~~-GttG-E~~~L---------s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~ 94 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVG-GSTG-ENFML---------STEEKKEIFRIAKDEAKD-QIALIAQVGSVNLKEAVELGKY 94 (293)
T ss_dssp HHHHHHHHHTSCCSEEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeC-cccc-chhhC---------CHHHHHHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHHH
Confidence 466778888 889888765 3211 00000 000012455556666543 69998765554444433 3
Q ss_pred HHHCCCcEEEeccccccC
Q 022271 152 ALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t 169 (300)
+-.+|||++++-++|...
T Consensus 95 a~~~Gadavlv~~P~y~~ 112 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFYYK 112 (293)
T ss_dssp HHHHTCSEEEEECCCSSC
T ss_pred HHhcCCCEEEECCCCCCC
Confidence 445899999999999864
No 419
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=65.12 E-value=42 Score=29.63 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=81.3
Q ss_pred cCCccceecCCCCCCCCcHHHHHHHHhCCceEEecCCC-----------------CCCHHHHHHHHHH-HHhhc-CCcEE
Q 022271 7 LGFEYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPD-----------------WEAPDYLRDLIRK-TRSLT-ERPFG 67 (300)
Q Consensus 7 lg~~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~-----------------~~~~~~l~~~i~~-~r~~~-~~P~g 67 (300)
..-..|||.++-+ .-|.+..+++||..+|-..+ |.+..++--++.+ +--.. +.|+-
T Consensus 24 i~~~~~iig~gaG-----tGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~ 98 (286)
T 2p10_A 24 IRAGEPIIGGGAG-----TGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVL 98 (286)
T ss_dssp HHTTCCEEEEEES-----SHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEE
T ss_pred HhcCCceEEEecc-----cchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEE
Confidence 3356799975533 25777788888888873211 2344444333333 32222 56866
Q ss_pred eeeecCCCc---HHHHHHHHHcCCcEEEEcC---CCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEcc
Q 022271 68 VGVVLAFPH---NENIKAILSEKVAVLQVSW---GEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAG 141 (300)
Q Consensus 68 vnl~~~~~~---~~~~~~~~e~g~~~i~~~~---G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaG 141 (300)
.++-..+|. ...++.+.+.|...+ .++ |.....+-+.+.+.| .+.-..+..|+.+. +.=++--.
T Consensus 99 Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~g------m~~~~eve~I~~A~---~~gL~Ti~ 168 (286)
T 2p10_A 99 AGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETG------MSYAQEVEMIAEAH---KLDLLTTP 168 (286)
T ss_dssp EEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTT------CCHHHHHHHHHHHH---HTTCEECC
T ss_pred EEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcC------CCHHHHHHHHHHHH---HCCCeEEE
Confidence 664444443 567789999999999 543 222345555666776 23223333333332 11122222
Q ss_pred CCCChHHHHHHHHCCCcEEEe
Q 022271 142 GIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 142 GI~~g~~v~aal~lGAdgV~~ 162 (300)
=..|.++++++..+|+|.+.+
T Consensus 169 ~v~~~eeA~amA~agpDiI~~ 189 (286)
T 2p10_A 169 YVFSPEDAVAMAKAGADILVC 189 (286)
T ss_dssp EECSHHHHHHHHHHTCSEEEE
T ss_pred ecCCHHHHHHHHHcCCCEEEE
Confidence 356899999999999998776
No 420
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=64.82 E-value=74 Score=30.02 Aligned_cols=87 Identities=13% Similarity=0.166 Sum_probs=58.3
Q ss_pred HHHHHHHhCCc--eEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc-HHHHHHHHHcCCcEEEEcC-------
Q 022271 26 ELVAAVANAGG--LGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH-NENIKAILSEKVAVLQVSW------- 95 (300)
Q Consensus 26 ~la~avs~aGg--lG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~------- 95 (300)
+++.++.++|. +.+--+.|..+|.++.+.++.+|+..+.|+++-.-..... ....-.++++|++.|..+.
T Consensus 162 ~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~gert 241 (464)
T 2nx9_A 162 DVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTY 241 (464)
T ss_dssp HHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTT
T ss_pred HHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCCC
Confidence 56666677776 3333233568999999999999988777777644322221 4566677889999998753
Q ss_pred CCC-cHHHHHHHHHCCCe
Q 022271 96 GEY-SEELVLEAHSAGVK 112 (300)
Q Consensus 96 G~~-~~~~v~~~~~~G~~ 112 (300)
|.+ ...++..++..|..
T Consensus 242 GN~~lE~lv~~L~~~g~~ 259 (464)
T 2nx9_A 242 GHPATESLVATLQGTGYD 259 (464)
T ss_dssp SCCBHHHHHHHHTTSTTC
T ss_pred cCHHHHHHHHHHHhcCCC
Confidence 343 35667777766654
No 421
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=64.81 E-value=7.6 Score=35.74 Aligned_cols=118 Identities=10% Similarity=-0.019 Sum_probs=70.4
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCC----cHHHHHHHHH-cCCc--EE-EEcCCCCcH---HHHHHHHHCCCeEee
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFP----HNENIKAILS-EKVA--VL-QVSWGEYSE---ELVLEAHSAGVKVVP 115 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~----~~~~~~~~~e-~g~~--~i-~~~~G~~~~---~~v~~~~~~G~~v~~ 115 (300)
+++++.+..++..+. .--.+++-.... ..+.++.+.+ .+.+ +. ..+.+-..+ ++.+.+.+.|+..+.
T Consensus 165 ~~~~~~~~a~~~~~~--Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 242 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDR--GYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYE 242 (392)
T ss_dssp CHHHHHHHHHHHHTT--TCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeec
Confidence 677776666665543 222444433321 1344555544 3443 22 223232223 344555667877775
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-----CcEEEeccccccC
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-----AQGICLGTRFVAS 169 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-----AdgV~~GT~fl~t 169 (300)
+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+..
T Consensus 243 qP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GG 301 (392)
T 1tzz_A 243 EVGDPLDYALQAALAEFY---PGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYG 301 (392)
T ss_dssp CCSCTTCHHHHHHHTTTC---CSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTC
T ss_pred CCCChhhHHHHHHHHhhC---CCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCC
Confidence 41 2345566666655 79999999999999999999988 8999986544433
No 422
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=64.80 E-value=13 Score=32.98 Aligned_cols=123 Identities=12% Similarity=0.129 Sum_probs=65.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC-CCChHHHH---HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGYV---AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG-I~~g~~v~---aa 152 (300)
..+++.+++.|++.+.+. |..- +.... ...--..++..+++.+++ ++|||+.-| .++.+.+. .+
T Consensus 38 ~~lv~~li~~Gv~Gl~v~-GtTG-E~~~L---------s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A 105 (307)
T 3s5o_A 38 EENLHKLGTFPFRGFVVQ-GSNG-EFPFL---------TSSERLEVVSRVRQAMPK-NRLLLAGSGCESTQATVEMTVSM 105 (307)
T ss_dssp HHHHHHHTTSCCSEEEES-SGGG-TGGGS---------CHHHHHHHHHHHHHTSCT-TSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-cccc-chhhC---------CHHHHHHHHHHHHHHcCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 456777788899988775 3211 00000 000012355556666543 699887544 44444332 44
Q ss_pred HHCCCcEEEeccccccC---cccCCCHHHHHHHHcCCCcceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVAS---EESYAHPEYKRKLVEMDKTEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t---~Es~~~~~~k~~i~~a~~t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|... .+...-..|+ .|.++.+.- ..++. .|++.+.-+..+.+.++.
T Consensus 106 ~~~Gadavlv~~P~y~~~~~s~~~l~~~f~-~ia~a~~lP-iilYn---~P~~tg~~l~~~~~~~La 167 (307)
T 3s5o_A 106 AQVGADAAMVVTPCYYRGRMSSAALIHHYT-KVADLSPIP-VVLYS---VPANTGLDLPVDAVVTLS 167 (307)
T ss_dssp HHTTCSEEEEECCCTTGGGCCHHHHHHHHH-HHHHHCSSC-EEEEE---CHHHHSCCCCHHHHHHHH
T ss_pred HHcCCCEEEEcCCCcCCCCCCHHHHHHHHH-HHHhhcCCC-EEEEe---CCcccCCCCCHHHHHHHh
Confidence 56999999999998863 2222333344 344444433 23443 234334445555555554
No 423
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=64.53 E-value=77 Score=28.13 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=30.1
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+..+.++.+.+...+..|+ .| +...+..++.+|++|++-++..+..++
T Consensus 180 d~~~~~~~~~~~~~~~f~v~-~G---~d~~~l~~l~~G~~G~is~~an~~P~~ 228 (318)
T 3qfe_A 180 SVGKITRLAATLPPAAFSVF-GG---QSDFLIGGLSVGSAGCIAAFANVFPKT 228 (318)
T ss_dssp CHHHHHHHHHHSCGGGCEEE-ES---CGGGHHHHHHTTCCEEECGGGGTCHHH
T ss_pred CHHHHHHHHHhcCCCCEEEE-Ee---cHHHHHHHHHCCCCEEEecHHHhhHHH
Confidence 34444455544321133343 33 234577899999999999998877654
No 424
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=64.48 E-value=38 Score=24.57 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=33.5
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
-+.++.++++.....++|||+-.+-.+...+..++.+||++...
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~ 109 (129)
T 3h1g_A 66 GLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIV 109 (129)
T ss_dssp HHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEe
Confidence 35666666653211268999999999999999999999998764
No 425
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=64.48 E-value=24 Score=31.23 Aligned_cols=123 Identities=15% Similarity=0.152 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCC-CChHHH---HHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGI-VDARGY---VAA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI-~~g~~v---~aa 152 (300)
...++.+++.|++.+.+. |..-+ .... ...--..++..+++.+++ ++|||+.=|= ++.+.+ ..+
T Consensus 35 ~~lv~~li~~Gv~Gl~v~-GtTGE-~~~L---------s~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A 102 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVG-GSTGE-AFVQ---------SLSEREQVLEIVAEEAKG-KIKLIAHVGCVSTAESQQLAASA 102 (303)
T ss_dssp HHHHHHHHHTTCSEEEES-STTTT-GGGS---------CHHHHHHHHHHHHHHHTT-TSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC-eeccC-hhhC---------CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 466788888899988775 33110 0000 000012455556666543 6999875444 444433 234
Q ss_pred HHCCCcEEEeccccccCc-ccCCCHHHHHHHHcCCC-cceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASE-ESYAHPEYKRKLVEMDK-TEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~-Es~~~~~~k~~i~~a~~-t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-++|.... +...-..|+ .|.++.+ .- ..++. .|++.+.-+..+.+.++.
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~f~-~va~a~~~lP-iilYn---~P~~tg~~l~~~~~~~La 163 (303)
T 2wkj_A 103 KRYGFDAVSAVTPFYYPFSFEEHCDHYR-AIIDSADGLP-MVVYN---IPALSGVKLTLDQINTLV 163 (303)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHH-HHHHHHTTCC-EEEEE---CHHHHCCCCCHHHHHHHH
T ss_pred HhCCCCEEEecCCCCCCCCHHHHHHHHH-HHHHhCCCCC-EEEEe---CccccCCCCCHHHHHHHh
Confidence 458999999999998643 111223333 3444433 33 23443 133333345555555543
No 426
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=64.44 E-value=7.3 Score=36.02 Aligned_cols=63 Identities=10% Similarity=-0.092 Sum_probs=47.2
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+
T Consensus 225 ~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 291 (394)
T 3mkc_A 225 LLNSIEDLELYFAEATLQHDDLSGHAKLVENT---RSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRC 291 (394)
T ss_dssp HHHHTGGGCCSEEESCSCTTCHHHHHHHHHHC---SSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHhhhcCCeEEECCCCchhHHHHHHHHhhC---CCCEEeCCCCCCHHHHHHHHHcCCCCeEecCcccc
Confidence 4444556777777641 2455677788776 79999999999999999999986 78888865444
No 427
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=64.36 E-value=11 Score=34.98 Aligned_cols=64 Identities=5% Similarity=-0.060 Sum_probs=48.0
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 220 ~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~G 287 (401)
T 3sbf_A 220 FAKEVEQYKPYFIEDILPPNQTEWLDNIRSQS---SVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIG 287 (401)
T ss_dssp HHHHHGGGCCSCEECSSCTTCGGGHHHHHTTC---CCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGT
T ss_pred HHHHHHhcCCCEEECCCChhHHHHHHHHHhhC---CCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccC
Confidence 3445566777776541 2456677887776 79999999999999999999986 788888655543
No 428
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=64.20 E-value=6.2 Score=37.98 Aligned_cols=151 Identities=11% Similarity=0.105 Sum_probs=93.3
Q ss_pred ccccC--CccceecCCCCCC---C----CcHHHHHHHHh--CCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeec
Q 022271 4 RGMLG--FEYGIVQAPLGPD---I----SGPELVAAVAN--AGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVL 72 (300)
Q Consensus 4 ~~~lg--~~~Pii~apM~~g---~----s~~~la~avs~--aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~ 72 (300)
+++|| ++.||+.+||+ + . ....++.++.+ +|..-+++.....+.+++. +.....+.|+.++|..
T Consensus 181 t~i~G~~l~~Pi~iAPma-~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~----~~~~~~~~~~~~QLy~ 255 (511)
T 1kbi_A 181 TDMLGSHVDVPFYVSATA-LCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEII----EAAPSDKQIQWYQLYV 255 (511)
T ss_dssp EEETTEEESSSEEECCCS-CGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHH----HTCCCSSCCEEEEECC
T ss_pred cccCCccCCCCeEeccch-hccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHH----hhcCCCCCCeEEEEee
Confidence 34566 57899999998 4 3 24578888888 8876666542123444332 1110124688899874
Q ss_pred CCC---cHHHHHHHHHcCCcEEEEcCCCCc----HHHHHHH--------HH-CC------Ce---Eee---c-cChhchH
Q 022271 73 AFP---HNENIKAILSEKVAVLQVSWGEYS----EELVLEA--------HS-AG------VK---VVP---Q-DGLISLL 123 (300)
Q Consensus 73 ~~~---~~~~~~~~~e~g~~~i~~~~G~~~----~~~v~~~--------~~-~G------~~---v~~---~-~~~~~ll 123 (300)
... ..+.++.+.+.|++.+.++.++|. +..++.. .. .| .- .+. . .-++..+
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i 335 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDI 335 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHH
Confidence 332 145677888899998887776542 2222211 00 01 00 000 0 1134557
Q ss_pred HHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEec
Q 022271 124 PMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 124 ~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~G 163 (300)
..+++.. ++||++- |+.+.+++..+..+|||+|.++
T Consensus 336 ~~lr~~~---~~PvivK-gv~~~e~A~~a~~aGad~I~vs 371 (511)
T 1kbi_A 336 EELKKKT---KLPIVIK-GVQRTEDVIKAAEIGVSGVVLS 371 (511)
T ss_dssp HHHHHHC---SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHh---CCcEEEE-eCCCHHHHHHHHHcCCCEEEEc
Confidence 7777776 7999988 5778999999999999999993
No 429
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=64.03 E-value=6 Score=36.58 Aligned_cols=65 Identities=5% Similarity=-0.179 Sum_probs=48.1
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...+.
T Consensus 219 ~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~G 287 (394)
T 3mqt_A 219 WTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAI---NTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCG 287 (394)
T ss_dssp HHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHS---SSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSS
T ss_pred HHHHHHhhcCCeEEECCCCcccHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccC
Confidence 33444556777777641 2455677788776 79999999999999999999875 789988654443
No 430
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=64.03 E-value=23 Score=30.14 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=36.9
Q ss_pred HHHHHHHHHCCCeEeec----cC--h---hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH-HCCCcEEEecccccc
Q 022271 100 EELVLEAHSAGVKVVPQ----DG--L---ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL-SLGAQGICLGTRFVA 168 (300)
Q Consensus 100 ~~~v~~~~~~G~~v~~~----~~--~---~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal-~lGAdgV~~GT~fl~ 168 (300)
.+.++.+.+.|+.-+-+ .+ . +.+|.++.+..+ .++-|++.|||.. ..+...+ ..|++.+=. |.+..
T Consensus 136 ~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a~-~ri~Im~GgGV~~-~Ni~~l~~~tGv~e~H~-s~i~~ 211 (224)
T 2bdq_A 136 KKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYAN-NRIEIMVGGGVTA-ENYQYICQETGVKQAHG-TRITQ 211 (224)
T ss_dssp HHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHHT-TSSEEEECSSCCT-TTHHHHHHHHTCCEEEE-TTCC-
T ss_pred HHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhhC-CCeEEEeCCCCCH-HHHHHHHHhhCCCEEcc-ccccC
Confidence 45566666667654432 11 2 344555544433 2578888889864 4555555 479887763 44443
No 431
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=63.95 E-value=24 Score=30.76 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=0.0
Q ss_pred cChhchHHHHHHhhCCCCCcEEE-----ccCCCCh--------HHHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHH
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIA-----AGGIVDA--------RGYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLV 183 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPVia-----aGGI~~g--------~~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~ 183 (300)
.+.+.++.++++.+ ++||.+ .|+..-. +|+..+..+|||||++| ..+++..++...-+.|+
T Consensus 37 TPS~g~i~~~~~~~---~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G---~Lt~dg~iD~~~~~~Li 110 (256)
T 1twd_A 37 TPSLGVLKSVRQRV---TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTG---VLDVDGNVDMPRMEKIM 110 (256)
T ss_dssp CCCHHHHHHHHHHC---CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC---CBCTTSSBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc---CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEe---eECCCCCcCHHHHHHHH
Q ss_pred c-CCCcceE
Q 022271 184 E-MDKTEYT 191 (300)
Q Consensus 184 ~-a~~t~~t 191 (300)
+ ++....|
T Consensus 111 ~~a~~~~vT 119 (256)
T 1twd_A 111 AAAGPLAVT 119 (256)
T ss_dssp HHHTTSEEE
T ss_pred HHhCCCcEE
No 432
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=63.67 E-value=43 Score=24.93 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=43.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhh--CCCCCcEEEccCCCChHHHHHHHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLI--GDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~--~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.- ....+|||+-.+-.+.+.+.+++.
T Consensus 48 ~~al~~~~~~~~dlvl~D~~mp~-----------------~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~ 110 (143)
T 3m6m_D 48 EQVLDAMAEEDYDAVIVDLHMPG-----------------MNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQ 110 (143)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSS-----------------SCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHH
Confidence 44445555555666655544331 12345666665421 112589999999999999999999
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.||++...
T Consensus 111 ~Ga~~~l~ 118 (143)
T 3m6m_D 111 AGARAFLA 118 (143)
T ss_dssp TTCSEEEE
T ss_pred cChhheee
Confidence 99998654
No 433
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=63.64 E-value=40 Score=24.56 Aligned_cols=68 Identities=12% Similarity=0.053 Sum_probs=46.1
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|+. ...+.++.++++. . ++|||+-.+-.+......++..
T Consensus 43 ~~~a~~~~~~~~~dlii~d~~~~~~----------------~~g~~~~~~l~~~-~--~~~ii~ls~~~~~~~~~~~~~~ 103 (140)
T 3cg0_A 43 GEEAVRCAPDLRPDIALVDIMLCGA----------------LDGVETAARLAAG-C--NLPIIFITSSQDVETFQRAKRV 103 (140)
T ss_dssp HHHHHHHHHHHCCSEEEEESSCCSS----------------SCHHHHHHHHHHH-S--CCCEEEEECCCCHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEEecCCCCC----------------CCHHHHHHHHHhC-C--CCCEEEEecCCCHHHHHHHHhc
Confidence 3455555556666776666543210 1234556666655 2 7999999999999999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 104 g~~~~l~ 110 (140)
T 3cg0_A 104 NPFGYLA 110 (140)
T ss_dssp CCSEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 434
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=63.52 E-value=26 Score=29.83 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=27.7
Q ss_pred HHHHHHHCCCcEEEeccccccCcccCCCHHHHHHHHc-CCCcc
Q 022271 148 GYVAALSLGAQGICLGTRFVASEESYAHPEYKRKLVE-MDKTE 189 (300)
Q Consensus 148 ~v~aal~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~-a~~t~ 189 (300)
|+..+..+|||||++|- .+++..++...-+.+++ ++...
T Consensus 81 Di~~~~~~GadGvV~G~---Lt~dg~iD~~~~~~Li~~a~~~~ 120 (224)
T 2bdq_A 81 DILRAVELESDALVLGI---LTSNNHIDTEAIEQLLPATQGLP 120 (224)
T ss_dssp HHHHHHHTTCSEEEECC---BCTTSSBCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEEee---ECCCCCcCHHHHHHHHHHhCCCe
Confidence 56677789999999993 46666777666666665 45443
No 435
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=63.47 E-value=44 Score=24.98 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=32.8
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEe
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~ 162 (300)
.+.++.++++.. .++|||+-.+-.+...+..++..| ++++..
T Consensus 63 g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~ 105 (151)
T 3kcn_A 63 GTEVIQKARLIS--PNSVYLMLTGNQDLTTAMEAVNEGQVFRFLN 105 (151)
T ss_dssp HHHHHHHHHHHC--SSCEEEEEECGGGHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHHHHHhcC--CCcEEEEEECCCCHHHHHHHHHcCCeeEEEc
Confidence 355666666653 278999999999999999999999 887754
No 436
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=63.29 E-value=68 Score=27.05 Aligned_cols=142 Identities=17% Similarity=0.118 Sum_probs=81.8
Q ss_pred ccceecCCCCCCCCcHHHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhh-cCCcEEeeeecCCCcH---HHHHHHH-
Q 022271 10 EYGIVQAPLGPDISGPELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSL-TERPFGVGVVLAFPHN---ENIKAIL- 84 (300)
Q Consensus 10 ~~Pii~apM~~g~s~~~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~-~~~P~gvnl~~~~~~~---~~~~~~~- 84 (300)
..|||. +. +.++.+.+...-++|..+++.-. .+..+...+..++.. ...+ .++..-..+. +.+...+
T Consensus 74 ~~pvi~--lt-~~~~~~~~~~a~~~Ga~dyl~Kp---~~~~~~~~~~~~~~~~~~~~--~~ILivDD~~~~~~~l~~~L~ 145 (259)
T 3luf_A 74 GLPVVI--LT-ADISEDKREAWLEAGVLDYVMKD---SRHSLQYAVGLVHRLYLNQQ--IEVLVVDDSRTSRHRTMAQLR 145 (259)
T ss_dssp TCCEEE--EE-CC-CHHHHHHHHHTTCCEEEECS---SHHHHHHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEE--EE-ccCCHHHHHHHHHCCCcEEEeCC---chhHHHHHHHhhhhHhhcCC--CcEEEEeCCHHHHHHHHHHHH
Confidence 357764 34 45566777777889999988763 234444444444332 1122 2333322222 2333333
Q ss_pred HcCCcEEEEcCCCCcHHHHHHHHHCC-CeEee-c-----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCC
Q 022271 85 SEKVAVLQVSWGEYSEELVLEAHSAG-VKVVP-Q-----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 157 (300)
Q Consensus 85 e~g~~~i~~~~G~~~~~~v~~~~~~G-~~v~~-~-----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGA 157 (300)
+.+..+.... . ..+.++.+++.. ..++. + ..-+.++.++++.....++|||+-.+-.+.....+++.+||
T Consensus 146 ~~~~~v~~a~--~-~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga 222 (259)
T 3luf_A 146 KQLLQVHEAS--H-AREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGA 222 (259)
T ss_dssp TTTCEEEEES--S-HHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTC
T ss_pred HcCcEEEEeC--C-HHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcCh
Confidence 3455554443 3 356677666543 33332 2 23467888887753223689999999999999999999999
Q ss_pred cEEEe
Q 022271 158 QGICL 162 (300)
Q Consensus 158 dgV~~ 162 (300)
++...
T Consensus 223 ~~yl~ 227 (259)
T 3luf_A 223 NDFLN 227 (259)
T ss_dssp SEEEE
T ss_pred hheEc
Confidence 98644
No 437
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=63.23 E-value=9.4 Score=35.23 Aligned_cols=63 Identities=19% Similarity=0.100 Sum_probs=46.3
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++--..+
T Consensus 234 ~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 300 (407)
T 2o56_A 234 FGRMIEELGIFYYEEPVMPLNPAQMKQVADKV---NIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTC 300 (407)
T ss_dssp HHHHHGGGCCSCEECSSCSSSHHHHHHHHHHC---CSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHhcCCCEEeCCCChhhHHHHHHHHHhC---CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 444455667666654 12456677788776 79999999999999999999986 78888854443
No 438
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=63.21 E-value=24 Score=30.42 Aligned_cols=119 Identities=20% Similarity=0.130 Sum_probs=69.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCcHHHHHHHH-HcCCcEEEE-cC--CCCc-HHHHHH---HHHCCCeEeec
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPHNENIKAIL-SEKVAVLQV-SW--GEYS-EELVLE---AHSAGVKVVPQ 116 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~-e~g~~~i~~-~~--G~~~-~~~v~~---~~~~G~~v~~~ 116 (300)
..+.+++++.+++.++.. ..+|-+. ..+...+...+ ..++++..+ +| |..+ ..-+.+ .-+.|..=+..
T Consensus 39 ~~t~~~i~~lc~eA~~~~--~~aVcV~--p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDm 114 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYK--FASVCVN--PTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDM 114 (239)
T ss_dssp TCCHHHHHHHHHHHHHHT--CSEEEEC--GGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHHHhcC--CcEEEEC--HHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEE
Confidence 468889999999988752 2223222 22334444444 335665433 22 4322 212222 23456654322
Q ss_pred ---c-----C----hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHH----HHCCCcEEEeccccc
Q 022271 117 ---D-----G----LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA----LSLGAQGICLGTRFV 167 (300)
Q Consensus 117 ---~-----~----~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aa----l~lGAdgV~~GT~fl 167 (300)
. + ...-+.+++++..+.-++||..-|.-+.+.+..+ ..+|||.|-..|-|-
T Consensus 115 ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 115 VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 1 2 2334556666663223788888888888888877 678999999999995
No 439
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=63.15 E-value=50 Score=31.21 Aligned_cols=97 Identities=19% Similarity=0.167 Sum_probs=56.7
Q ss_pred EEeeeecCC---C-----cHHHHH--HHHHcCCcEEEEcCCCCcHHHHHH----HHHCC--CeEeec-------------
Q 022271 66 FGVGVVLAF---P-----HNENIK--AILSEKVAVLQVSWGEYSEELVLE----AHSAG--VKVVPQ------------- 116 (300)
Q Consensus 66 ~gvnl~~~~---~-----~~~~~~--~~~e~g~~~i~~~~G~~~~~~v~~----~~~~G--~~v~~~------------- 116 (300)
.|||+.... | +.+.++ ..++.++++|.++|=.-+. -+.. +.+.| +.++..
T Consensus 165 KgvNlPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~-Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeI 243 (461)
T 3qtg_A 165 KAIVVEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCK-DVDSVRSLLTELGFQSQVAVKIETKGAVNNLEEL 243 (461)
T ss_dssp CBEEETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHH-HHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHH
T ss_pred CceecCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHH-HHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHH
Confidence 577876532 2 245677 7888999999999855333 2333 33444 455543
Q ss_pred ----cC------h------hchHH----HHHHhhCCCCCcEEEccC---------CCChH---HHHHHHHCCCcEEEec
Q 022271 117 ----DG------L------ISLLP----MVVDLIGDRDIPIIAAGG---------IVDAR---GYVAALSLGAQGICLG 163 (300)
Q Consensus 117 ----~~------~------~~ll~----~v~~~~~~~~iPViaaGG---------I~~g~---~v~aal~lGAdgV~~G 163 (300)
++ . +.-+| ++.........|||.|-- .-|.. |++.|..-|+|+|++.
T Consensus 244 l~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLS 322 (461)
T 3qtg_A 244 VQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLT 322 (461)
T ss_dssp HHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEc
Confidence 00 0 11122 222222112689998544 34433 7888999999999996
No 440
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=63.10 E-value=12 Score=34.97 Aligned_cols=64 Identities=8% Similarity=-0.050 Sum_probs=48.9
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+-+.+..++..++..| +|.|++-...+.
T Consensus 241 ~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~G 308 (422)
T 3tji_A 241 LAKQLEPFQPYFIEDILPPQQSAWLEQVRQQS---CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIG 308 (422)
T ss_dssp HHHHHGGGCCSEEECCSCGGGGGGHHHHHHHC---CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGT
T ss_pred HHHHHHhhCCCeEECCCChhhHHHHHHHHhhC---CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccC
Confidence 3455666787777651 2466788888886 79999999999999999999986 788888654443
No 441
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=62.92 E-value=26 Score=32.15 Aligned_cols=61 Identities=8% Similarity=0.051 Sum_probs=43.5
Q ss_pred HHHHHHCCCeEeecc---Ch-hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 103 VLEAHSAGVKVVPQD---GL-ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 103 v~~~~~~G~~v~~~~---~~-~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
.+.+.+.|+..+.+. .. +..+.++++.+ ++||.+.+.+.+..++..++..| +|.|++-...
T Consensus 219 ~~~L~~~~i~~iEeP~~~~d~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 284 (392)
T 3ddm_A 219 AQRLGPAQLDWLEEPLRADRPAAEWAELAQAA---PMPLAGGENIAGVAAFETALAARSLRVMQPDLAK 284 (392)
T ss_dssp HHHHGGGCCSEEECCSCTTSCHHHHHHHHHHC---SSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTT
T ss_pred HHHHHHhCCCEEECCCCccchHHHHHHHHHhc---CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcch
Confidence 344445566555431 13 55677777776 79999999999999999999876 6788875433
No 442
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=62.74 E-value=78 Score=27.57 Aligned_cols=139 Identities=13% Similarity=0.089 Sum_probs=72.7
Q ss_pred HHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCCCc--HHHHHHHHHcCCcEEEEcC-
Q 022271 26 ELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAFPH--NENIKAILSEKVAVLQVSW- 95 (300)
Q Consensus 26 ~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~~~--~~~~~~~~e~g~~~i~~~~- 95 (300)
+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..... .+..+.+.+.|++.+.+..
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 5555566778777765432 357777777777776653 35665554432211 2344555556666654421
Q ss_pred --CCCc-HHHHHHH----HHCCCeEeec-------------------------------cChhchHHHHHHhhCCCCCcE
Q 022271 96 --GEYS-EELVLEA----HSAGVKVVPQ-------------------------------DGLISLLPMVVDLIGDRDIPI 137 (300)
Q Consensus 96 --G~~~-~~~v~~~----~~~G~~v~~~-------------------------------~~~~~ll~~v~~~~~~~~iPV 137 (300)
..|+ +.+++.. ...++.++.- .+.+..+.++++.. +..|
T Consensus 105 ~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s~gd~~~~~~~~~~~---~f~v 181 (289)
T 2yxg_A 105 YYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIHDA---KITV 181 (289)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCSCTHHHHHHHHHT---CSEE
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHhC---CeEE
Confidence 1111 1222111 1223333211 12233333444332 3333
Q ss_pred EEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 138 IAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 138 iaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+| +...+..++.+|++|++-|+..+++++
T Consensus 182 -~~G---~d~~~~~~l~~G~~G~is~~~n~~P~~ 211 (289)
T 2yxg_A 182 -LSG---NDELTLPIIALGGKGVISVVANIVPKE 211 (289)
T ss_dssp -EES---CGGGHHHHHHTTCCEEEESGGGTCHHH
T ss_pred -EEC---cHHHHHHHHHCCCCEEEeChhhhhHHH
Confidence 344 234577889999999999999887654
No 443
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=62.57 E-value=20 Score=35.03 Aligned_cols=84 Identities=8% Similarity=0.120 Sum_probs=55.4
Q ss_pred HHHH-HHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhC--CCCCcEEEccCCCChHHHH
Q 022271 78 ENIK-AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIG--DRDIPIIAAGGIVDARGYV 150 (300)
Q Consensus 78 ~~~~-~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~--~~~iPViaaGGI~~g~~v~ 150 (300)
..+. .+...|.+++.+....|+.++++.+++.+..++.. ..++..++++.+.++ +.++||++.|.+.+..-..
T Consensus 116 ~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~~~diVgLS~l~t~~~~~m~~~i~~Lr~~g~~i~ViVGGa~~~~~~a~ 195 (579)
T 3bul_A 116 NIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTA 195 (579)
T ss_dssp HHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEESTTCCHHHHH
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEecCCCCHHHHHHHHHHHHHcCCCCeEEEEccccchhhhh
Confidence 3444 44467999999988888899999998877777654 223444555554442 2479999999988886532
Q ss_pred HHH---HCCCcEEE
Q 022271 151 AAL---SLGAQGIC 161 (300)
Q Consensus 151 aal---~lGAdgV~ 161 (300)
.-+ ..|||+..
T Consensus 196 ~~i~p~~~GAD~ya 209 (579)
T 3bul_A 196 VKIEQNYSGPTVYV 209 (579)
T ss_dssp HHTGGGCSSCEEEC
T ss_pred hhhhhcccCCeEEE
Confidence 122 13887654
No 444
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=62.52 E-value=8.9 Score=34.63 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=32.8
Q ss_pred hchHHHHHHhhCCCCCcEEEc--cCCCChHHHHHHHHCCCcEEEec
Q 022271 120 ISLLPMVVDLIGDRDIPIIAA--GGIVDARGYVAALSLGAQGICLG 163 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaa--GGI~~g~~v~aal~lGAdgV~~G 163 (300)
+..+.++++.+ ++||+.- |...+.+++..+...|||+|.+.
T Consensus 167 ~~~i~~vr~~~---~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 167 LKRIEQICSRV---SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHC---SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHc---CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEc
Confidence 45677777765 7999986 44478999999999999999994
No 445
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=62.48 E-value=25 Score=30.73 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=30.4
Q ss_pred hhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 119 LISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 119 ~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+..+.++.+ .. .+..| .+| +...+..++.+|++|++-|+..+++++
T Consensus 157 d~~~~~~~~~-~~-~~f~v-~~G---~d~~~~~~l~~G~~G~is~~~n~~P~~ 203 (283)
T 2pcq_A 157 DLSRIAFYQA-RL-QEFRV-YTG---HAPTFLGALALGAEGGILAAANLAPRA 203 (283)
T ss_dssp CHHHHHHHHH-HC-SSCEE-EEC---CGGGHHHHHHTTCCEEECGGGGTCHHH
T ss_pred CHHHHHHHHh-cC-CCEEE-EEC---cHHHHHHHHHcCCCEEEeCHHHhCHHH
Confidence 3444555555 42 13444 444 234577899999999999999987654
No 446
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=62.48 E-value=14 Score=34.19 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=47.0
Q ss_pred HHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 103 VLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 103 v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.+.+.+.|+..+.+ ...+..+.++++.+ ++||.+...+.+..++..++..| +|.|++--..+
T Consensus 230 ~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~ 295 (400)
T 4dxk_A 230 AKALTPYQTFWHEDPIKMDSLSSLTRYAAVS---PAPISASETLGSRWAFRDLLETGAAGVVMLDISWC 295 (400)
T ss_dssp HHHTGGGCCSEEECCBCTTSGGGHHHHHHHC---SSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTT
T ss_pred HHHHhhcCCCEEEcCCCcccHHHHHHHHHhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 34455567766654 12466778888876 79999999999999999999987 68998865444
No 447
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=62.48 E-value=11 Score=34.91 Aligned_cols=60 Identities=15% Similarity=0.063 Sum_probs=45.2
Q ss_pred HHHHHHHCCCeEeecc-ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecc
Q 022271 102 LVLEAHSAGVKVVPQD-GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGT 164 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~-~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT 164 (300)
+++.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-.
T Consensus 232 ~~~~L~~~~i~~iE~P~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 232 ILRELADFDLFWVEIDSYSPQGLAYVRNHS---PHPISSCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp HHHHTTTSCCSEEECCCSCHHHHHHHHHTC---SSCEEECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHhhcCCeEEEeCcCCHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 3444556777777642 2445567777766 79999999999999999999987 68888864
No 448
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=62.34 E-value=5.6 Score=36.91 Aligned_cols=149 Identities=13% Similarity=0.076 Sum_probs=92.2
Q ss_pred ccccC--CccceecCCCCCCCCcH-------HHHHHHHhCCceEEecCCCCCCHHHHHHHHHHHHhhcCCcEEeeeecCC
Q 022271 4 RGMLG--FEYGIVQAPLGPDISGP-------ELVAAVANAGGLGLLRAPDWEAPDYLRDLIRKTRSLTERPFGVGVVLAF 74 (300)
Q Consensus 4 ~~~lg--~~~Pii~apM~~g~s~~-------~la~avs~aGglG~i~~~~~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~ 74 (300)
++++| ++.||+.+||+ .+.. .++.++.++|...+++.....+.++ +.+. ..+.|+.++|+.+.
T Consensus 86 t~i~G~~l~~Pi~iAPmg--~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~----v~~~--~~~~~~~~QLy~~~ 157 (392)
T 2nzl_A 86 TSVLGQRVSMPICVGATA--MQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEE----VAEA--GPEALRWLQLYIYK 157 (392)
T ss_dssp EEETTEEESSSEEECCCS--CGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHH----HHHH--CTTSEEEEEECCBS
T ss_pred eEECCEecCCceEecccc--ccccccchHHHHHHHHHHHcCCCeeccchHHHHHHH----HHHh--cCCCcEEEEEEecC
Confidence 34666 57899999995 3332 5999999999887776532123443 2221 13679999998754
Q ss_pred Cc---HHHHHHHHHcCCcEEEEcCCCCcH-----HHHHHH---------------H--------HCCCe---Eee---c-
Q 022271 75 PH---NENIKAILSEKVAVLQVSWGEYSE-----ELVLEA---------------H--------SAGVK---VVP---Q- 116 (300)
Q Consensus 75 ~~---~~~~~~~~e~g~~~i~~~~G~~~~-----~~v~~~---------------~--------~~G~~---v~~---~- 116 (300)
.. .+.++.+.+.|++.+.++.++|.. +..... . ..|.. .+. +
T Consensus 158 d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~ 237 (392)
T 2nzl_A 158 DREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDP 237 (392)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCCh
Confidence 32 567788888999999887776531 111100 0 00000 000 0
Q ss_pred cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 117 DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 117 ~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
..++..+..+++.. ++||++- |+.+.+++..+..+|+|+|.+..
T Consensus 238 ~~~~~~i~~lr~~~---~~PvivK-gv~~~e~A~~a~~aGad~I~vs~ 281 (392)
T 2nzl_A 238 SISWEDIKWLRRLT---SLPIVAK-GILRGDDAREAVKHGLNGILVSN 281 (392)
T ss_dssp TCCHHHHHHHC--C---CSCEEEE-EECCHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHHhh---CCCEEEE-ecCCHHHHHHHHHcCCCEEEeCC
Confidence 01233344454444 7999987 56899999999999999999943
No 449
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=62.26 E-value=23 Score=25.31 Aligned_cols=69 Identities=7% Similarity=-0.049 Sum_probs=39.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.-....+|||+-.+-.+......++..|
T Consensus 35 ~~a~~~~~~~~~dlvi~D~~l~~-----------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g 97 (124)
T 1mb3_A 35 LSALSIARENKPDLILMDIQLPE-----------------ISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGG 97 (124)
T ss_dssp HHHHHHHHHHCCSEEEEESBCSS-----------------SBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHHHHT
T ss_pred HHHHHHHhcCCCCEEEEeCCCCC-----------------CCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHHhCC
Confidence 44455555556677666654331 1234556666653111268999988888888889999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 98 ~~~~l~ 103 (124)
T 1mb3_A 98 CEAYIS 103 (124)
T ss_dssp CSEEEC
T ss_pred CCEEEe
Confidence 998654
No 450
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=62.21 E-value=11 Score=34.97 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=47.0
Q ss_pred HHHHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 102 LVLEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.+.+.|+..+.+ ...+..+.++++.+ ++||++...+.+..++..++..| +|.|++--..+
T Consensus 220 ~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~ 286 (412)
T 4e4u_A 220 LAKRLEKYDPLWFEEPVPPGQEEAIAQVAKHT---SIPIATGERLTTKYEFHKLLQAGGASILQLNVARV 286 (412)
T ss_dssp HHHHHGGGCCSEEECCSCSSCHHHHHHHHHTC---SSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHhhhcCCcEEECCCChhhHHHHHHHHhhC---CCCEEecCccCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 445566677777764 12456677777776 79999999999999999999987 68888854433
No 451
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=61.97 E-value=34 Score=24.78 Aligned_cols=43 Identities=9% Similarity=0.098 Sum_probs=32.4
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++.++++.....++|||+-.+-.+...+..++.+||+++..
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~ 113 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT 113 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheec
Confidence 4556666653210268999999999999999999999998754
No 452
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=61.96 E-value=12 Score=32.19 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=28.6
Q ss_pred HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEE
Q 022271 123 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGIC 161 (300)
Q Consensus 123 l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~ 161 (300)
+..+....+..++.|||. ||-|.++...+..+|++.+|
T Consensus 211 l~~ii~~~~~~~~~viae-GVEt~~~~~~l~~lG~~~~Q 248 (268)
T 3hv8_A 211 LKGLIAELHEQQKLSIVP-FVESASVLATLWQAGATYIQ 248 (268)
T ss_dssp HHHHHHHHHHTTCEEEEC-CCCSHHHHHHHHHHTCSEEC
T ss_pred HHHHHHHHHHcCCCEEEE-eeCCHHHHHHHHHcCCCEec
Confidence 444444332237889887 69999999999999999876
No 453
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=61.92 E-value=13 Score=34.31 Aligned_cols=60 Identities=10% Similarity=0.073 Sum_probs=44.5
Q ss_pred HHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecc
Q 022271 102 LVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGT 164 (300)
Q Consensus 102 ~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT 164 (300)
+.+.+.+.|+..+.+. ..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-.
T Consensus 229 ~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 292 (410)
T 2qq6_A 229 FARAMEPFGLLWLEEPTPPENLDALAEVRRST---STPICAGENVYTRFDFRELFAKRAVDYVMPDV 292 (410)
T ss_dssp HHHHHGGGCCSEEECCSCTTCHHHHHHHHTTC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCBH
T ss_pred HHHHHhhcCCCeEECCCChhhHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 4444556677766541 2355667777665 79999999999999999999986 78888843
No 454
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=61.92 E-value=8.1 Score=35.47 Aligned_cols=38 Identities=21% Similarity=0.381 Sum_probs=30.8
Q ss_pred HHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecc
Q 022271 123 LPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGT 164 (300)
Q Consensus 123 l~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT 164 (300)
+..+++.. ++||++-| +.+.+++..+...|+|+|.+..
T Consensus 221 i~~lr~~~---~~PvivK~-v~~~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 221 IEEIAGHS---GLPVFVKG-IQHPEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp HHHHHHHS---SSCEEEEE-ECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHc---CCCEEEEc-CCCHHHHHHHHHcCCCEEEEcC
Confidence 44555554 79999874 7899999999999999999954
No 455
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=61.71 E-value=30 Score=25.13 Aligned_cols=70 Identities=13% Similarity=-0.005 Sum_probs=41.5
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+....|. ...+.++.++++.-...++|||+-.+-.+... ..++.
T Consensus 35 ~~~~a~~~l~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~~~~~ 96 (133)
T 3nhm_A 35 DGASGLQQALAHPPDVLISDVNMDG-----------------MDGYALCGHFRSEPTLKHIPVIFVSGYAPRTE-GPADQ 96 (133)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSCSS-----------------SCHHHHHHHHHHSTTTTTCCEEEEESCCC------TTS
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhCCccCCCCEEEEeCCCcHhH-HHHhh
Confidence 3355566666667777776654431 12355666666642112689999988888777 88899
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.||+++..
T Consensus 97 ~g~~~~l~ 104 (133)
T 3nhm_A 97 PVPDAYLV 104 (133)
T ss_dssp CCCSEEEE
T ss_pred cCCceEEe
Confidence 99998544
No 456
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=61.66 E-value=25 Score=33.86 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=24.8
Q ss_pred CCcEEEccCCCC------------hHHHHHHHHCCCcEEEec
Q 022271 134 DIPIIAAGGIVD------------ARGYVAALSLGAQGICLG 163 (300)
Q Consensus 134 ~iPViaaGGI~~------------g~~v~aal~lGAdgV~~G 163 (300)
+.|||.|--+-+ -.|++.|+.-|||+|++.
T Consensus 321 gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLS 362 (526)
T 4drs_A 321 GKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLS 362 (526)
T ss_dssp TCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred CCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEc
Confidence 689999876654 348889999999999995
No 457
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=61.48 E-value=16 Score=29.63 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=47.9
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
..+.++.+.+..+++|.+....|. ..-+.++.++++.. .++|||+-.+-.+...+..++..
T Consensus 35 ~~~a~~~~~~~~~dlvllD~~l~~-----------------~~g~~~~~~lr~~~--~~~~ii~ls~~~~~~~~~~~~~~ 95 (225)
T 1kgs_A 35 GEEGMYMALNEPFDVVILDIMLPV-----------------HDGWEILKSMRESG--VNTPVLMLTALSDVEYRVKGLNM 95 (225)
T ss_dssp HHHHHHHHHHSCCSEEEEESCCSS-----------------SCHHHHHHHHHHTT--CCCCEEEEESSCHHHHHHHTCCC
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhcC--CCCCEEEEeCCCCHHHHHHHHhC
Confidence 345566666667777777665431 12345666666543 27899999998898999999999
Q ss_pred CCcEEEe
Q 022271 156 GAQGICL 162 (300)
Q Consensus 156 GAdgV~~ 162 (300)
||+++..
T Consensus 96 ga~~~l~ 102 (225)
T 1kgs_A 96 GADDYLP 102 (225)
T ss_dssp CCSEEEE
T ss_pred CccEEEe
Confidence 9998765
No 458
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=61.44 E-value=12 Score=33.85 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=67.9
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeec-CCCcHHHHHHHHHc-CCcE-E--EEcCCCCcHH--HHHHHHHCCCeEeecc--
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVL-AFPHNENIKAILSE-KVAV-L--QVSWGEYSEE--LVLEAHSAGVKVVPQD-- 117 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~-~~~~~~~~~~~~e~-g~~~-i--~~~~G~~~~~--~v~~~~~~G~~v~~~~-- 117 (300)
+++++.+..++..+.. --++++-. +....+.++.+.+. |.++ + ..+.+-..++ +.+.+.+.|+..+.+.
T Consensus 141 ~~~~~~~~a~~~~~~G--f~~vKik~~~~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE~P~~ 218 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEG--YVRIKLKIEPGWDVEPVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIEQPLE 218 (368)
T ss_dssp CHHHHHHHHHHHHHHT--CSEEEEECBTTBSHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEECCSC
T ss_pred CHHHHHHHHHHHHHhC--ccEEEEecCchhHHHHHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEeCCCC
Confidence 6777766666655432 11233322 12245566666543 3332 2 2232322333 3333456787777641
Q ss_pred -ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 118 -GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 118 -~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
..+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++=-..
T Consensus 219 ~~~~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 266 (368)
T 1sjd_A 219 EEDVLGHAELARRI---QTPICLDESIVSARAAADAIKLGAVQIVNIKPGR 266 (368)
T ss_dssp TTCHHHHHHHHTTC---SSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTT
T ss_pred hhhHHHHHHHHHhC---CCCEEECCCcCCHHHHHHHHHcCCCCEEEecccc
Confidence 2345566676665 79999999999999999999986 6899884433
No 459
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=61.37 E-value=16 Score=33.18 Aligned_cols=62 Identities=15% Similarity=0.072 Sum_probs=44.0
Q ss_pred HHHHHCCCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 104 LEAHSAGVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 104 ~~~~~~G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+.+.+.|+..+.+ ...+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++-...+.
T Consensus 209 ~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~---~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 274 (370)
T 1chr_A 209 PELEALGVELIEQPVGRENTQALRRLSDNN---RVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMG 274 (370)
T ss_dssp HHHHTTTEEEEECCSCTTCHHHHHHHHHHS---CSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSC
T ss_pred HHHHhcCCCEEECCCCcccHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccC
Confidence 3444455554443 11234577777776 79999999999999999999975 789998655443
No 460
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=61.19 E-value=12 Score=33.07 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCCCc---HHHHHHHHHcC-CcEEEEc
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAFPH---NENIKAILSEK-VAVLQVS 94 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~---~~~~~~~~e~g-~~~i~~~ 94 (300)
+++.+.+.++++|+.++.|+.+++...... .+.++.+.++| ++.|.++
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 788899999999998899999998765432 23367778899 9998754
No 461
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.74 E-value=19 Score=32.15 Aligned_cols=122 Identities=8% Similarity=0.022 Sum_probs=64.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH----HH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV----AA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~----aa 152 (300)
..+++.+++.|++.+.+. |... +.... ...--..++..+++.+ + ++|||+.=|=.+-++.. .+
T Consensus 32 ~~lv~~li~~Gv~Gl~v~-GtTG-E~~~L---------t~~Er~~v~~~~v~~~-g-rvpViaGvg~~~t~~ai~la~~A 98 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVL-GILG-EAPKL---------DAAEAEAVATRFIKRA-K-SMQVIVGVSAPGFAAMRRLARLS 98 (313)
T ss_dssp HHHHHHHHHTTCSEEEES-TGGG-TGGGS---------CHHHHHHHHHHHHHHC-T-TSEEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEeC-ccCc-ChhhC---------CHHHHHHHHHHHHHHc-C-CCcEEEecCCCCHHHHHHHHHHH
Confidence 467788888899988765 3311 00000 0000123555566665 3 79999865543444432 44
Q ss_pred HHCCCcEEEeccccccCcccCCCHHHHHHHHcCCC--cceEEEecccCCCCCCCceecChhhHhhh
Q 022271 153 LSLGAQGICLGTRFVASEESYAHPEYKRKLVEMDK--TEYTDVFGRARWPGAPHRVLQTPFFSNWK 216 (300)
Q Consensus 153 l~lGAdgV~~GT~fl~t~Es~~~~~~k~~i~~a~~--t~~t~~~~~~~~~g~~~R~l~n~~~~~~~ 216 (300)
-.+|||++++-+.|....+...-..|+ .|.++.+ .- ..++. .|++.+.-+..+++.++.
T Consensus 99 ~~~Gadavlv~~P~~~~s~~~l~~~f~-~va~a~~~~lP-iilYn---~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 99 MDAGAAGVMIAPPPSLRTDEQITTYFR-QATEAIGDDVP-WVLQD---YPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp HHHTCSEEEECCCTTCCSHHHHHHHHH-HHHHHHCTTSC-EEEEE---CHHHHCCCCCHHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCHHHHHHHHH-HHHHhCCCCCc-EEEEe---CccccCcCCCHHHHHHHH
Confidence 458999999999984432222223333 3333333 32 23453 244444556666666654
No 462
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=60.69 E-value=35 Score=32.68 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=55.6
Q ss_pred EEeeeecCC---C-----cHHHHHHHHHcCCcEEEEcCCCCcHH---HHHHHHH--CCCeEeec----------------
Q 022271 66 FGVGVVLAF---P-----HNENIKAILSEKVAVLQVSWGEYSEE---LVLEAHS--AGVKVVPQ---------------- 116 (300)
Q Consensus 66 ~gvnl~~~~---~-----~~~~~~~~~e~g~~~i~~~~G~~~~~---~v~~~~~--~G~~v~~~---------------- 116 (300)
.|||+.... | +.+.++.+++.|++.|.+++=.-+.+ +.+.+.+ ..+.++..
T Consensus 177 KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~ 256 (500)
T 1a3w_A 177 KGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKV 256 (500)
T ss_dssp CBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHH
T ss_pred CCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHh
Confidence 477765432 1 25678899999999999987332222 2222222 34566554
Q ss_pred --------------cChhchHHH----HHHhhCCCCCcEEEcc---------CCCChH---HHHHHHHCCCcEEEec
Q 022271 117 --------------DGLISLLPM----VVDLIGDRDIPIIAAG---------GIVDAR---GYVAALSLGAQGICLG 163 (300)
Q Consensus 117 --------------~~~~~ll~~----v~~~~~~~~iPViaaG---------GI~~g~---~v~aal~lGAdgV~~G 163 (300)
.+. .-++. +..+.+..++|+|.|. ..-+.. |++.++..|+|+|+++
T Consensus 257 ~DgImvgrgDLgvelg~-~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs 332 (500)
T 1a3w_A 257 TDGVMVARGDLGIEIPA-PEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLS 332 (500)
T ss_dssp SSEEEECHHHHHHHTTG-GGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBS
T ss_pred CCEEEECchHhhhhcCc-HHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEec
Confidence 111 11222 2222111268998643 344433 8899999999999996
No 463
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=60.59 E-value=87 Score=27.42 Aligned_cols=98 Identities=23% Similarity=0.198 Sum_probs=63.2
Q ss_pred cCCCCCCCCcHHHHHHHH----hCCc--eEEecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCC-cHHHHHHHHHc
Q 022271 15 QAPLGPDISGPELVAAVA----NAGG--LGLLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFP-HNENIKAILSE 86 (300)
Q Consensus 15 ~apM~~g~s~~~la~avs----~aGg--lG~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~-~~~~~~~~~e~ 86 (300)
..|.. +.++++.+..+. ++|. +.+--+.|+.+|++..+.++++++.. +.|+++-.-.... ..+....+++.
T Consensus 149 ~~e~~-~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~a 227 (302)
T 2ftp_A 149 GCPYD-GDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLE 227 (302)
T ss_dssp CBTTT-BCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHT
T ss_pred eCCcC-CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHh
Confidence 34554 567776555555 5765 22222234679999999999999877 4677664432222 25667788899
Q ss_pred CCcEEEEcC-------------CCC-cHHHHHHHHHCCCeE
Q 022271 87 KVAVLQVSW-------------GEY-SEELVLEAHSAGVKV 113 (300)
Q Consensus 87 g~~~i~~~~-------------G~~-~~~~v~~~~~~G~~v 113 (300)
|++.|..+. |++ ..+++..++..|...
T Consensus 228 Ga~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 228 GIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp TCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBC
T ss_pred CCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCC
Confidence 999997653 222 357777788777654
No 464
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=60.46 E-value=14 Score=27.29 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=45.9
Q ss_pred cHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHH-HHHH
Q 022271 76 HNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYV-AALS 154 (300)
Q Consensus 76 ~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~-aal~ 154 (300)
..+.++.+.+..+++|.+....|. ...+.++.++++.-...++|||+-.+-.+..... .++.
T Consensus 39 ~~~a~~~l~~~~~dlvi~d~~l~~-----------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ 101 (140)
T 3grc_A 39 AAQALEQVARRPYAAMTVDLNLPD-----------------QDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQP 101 (140)
T ss_dssp HHHHHHHHHHSCCSEEEECSCCSS-----------------SCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTT
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhh
Confidence 355566666666777776654431 1235666667652111279999988888887777 8888
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.||+++..
T Consensus 102 ~g~~~~l~ 109 (140)
T 3grc_A 102 LAVSTWLE 109 (140)
T ss_dssp TCCCEEEC
T ss_pred cCCCEEEe
Confidence 99998754
No 465
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=60.17 E-value=66 Score=28.40 Aligned_cols=47 Identities=19% Similarity=0.092 Sum_probs=33.4
Q ss_pred chHHHHHHhhCCCCCcEEEccCCCChHHHHH----HHHCCCcEEEeccccc
Q 022271 121 SLLPMVVDLIGDRDIPIIAAGGIVDARGYVA----ALSLGAQGICLGTRFV 167 (300)
Q Consensus 121 ~ll~~v~~~~~~~~iPViaaGGI~~g~~v~a----al~lGAdgV~~GT~fl 167 (300)
.-+.+|+++..+.-+.||..-|.-+.+.+.+ +..+|||.|--.|.|-
T Consensus 162 ~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 162 QDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp HHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCC
Confidence 3456666665322277888888888777544 3458999999999995
No 466
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=59.96 E-value=58 Score=27.58 Aligned_cols=82 Identities=6% Similarity=-0.119 Sum_probs=49.6
Q ss_pred cHHHHHHHHHcCC--cEEEEcCCCCcHHHHHHHHHCCCeEeecc-C--hhchHHHHHHhhCCCCCcEEEccCCCChHHHH
Q 022271 76 HNENIKAILSEKV--AVLQVSWGEYSEELVLEAHSAGVKVVPQD-G--LISLLPMVVDLIGDRDIPIIAAGGIVDARGYV 150 (300)
Q Consensus 76 ~~~~~~~~~e~g~--~~i~~~~G~~~~~~v~~~~~~G~~v~~~~-~--~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~ 150 (300)
+.+.++.+.+..+ +...+.... +..+...++..|+..++.. . +-.++.++.+. +++|.+- .+.+.+++.
T Consensus 152 ~~~~l~~~~~~~p~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~----G~~v~~W-Tvn~~~~~~ 225 (252)
T 3qvq_A 152 NYFALVSAKALWPEIARGYNVSAI-PSAWQERLEHLDCAGLHIHQSFFDVQQVSDIKAA----GYKVLAF-TINDESLAL 225 (252)
T ss_dssp CHHHHHHHHHHCTTSCEEEECSSC-CTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHT----TCEEEEE-CCCCHHHHH
T ss_pred CHHHHHHHHHHCCCCcEEEEEecC-chhHHHHHHHcCCeEEecchhhCCHHHHHHHHHC----CCEEEEE-cCCCHHHHH
Confidence 3556666666544 444444332 3344555555666555421 1 22344444332 6788777 689999999
Q ss_pred HHHHCCCcEEEec
Q 022271 151 AALSLGAQGICLG 163 (300)
Q Consensus 151 aal~lGAdgV~~G 163 (300)
.++.+|+|||.--
T Consensus 226 ~l~~~GVdgIiTD 238 (252)
T 3qvq_A 226 KLYNQGLDAVFSD 238 (252)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHcCCCEEEeC
Confidence 9999999998753
No 467
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=59.85 E-value=95 Score=28.19 Aligned_cols=118 Identities=16% Similarity=0.147 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEeeeecCC-C---cHHHHHHHHHc--CCcEE-EEcCCCCc---HHHHHHHHHCCCeEee
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGVGVVLAF-P---HNENIKAILSE--KVAVL-QVSWGEYS---EELVLEAHSAGVKVVP 115 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gvnl~~~~-~---~~~~~~~~~e~--g~~~i-~~~~G~~~---~~~v~~~~~~G~~v~~ 115 (300)
.+++++.+..++..+. +--.+++-... + +.+.++.+.+. .+++. ..+.+-.+ ..+.+++.+.|+..+-
T Consensus 147 ~~~~~~~~~a~~~~~~--G~~~~K~Kvg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE 224 (385)
T 3i6e_A 147 PDFDADIALMERLRAD--GVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE 224 (385)
T ss_dssp SSHHHHHHHHHHHHHH--TCCEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEEecCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 4677666666655443 22234443322 1 13344444443 23332 22322222 2456677778887776
Q ss_pred cc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 116 QD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 116 ~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
+. ..+..+.++++.. ++||.+..-+.+..++..++..| +|.|++-...+.
T Consensus 225 qP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 278 (385)
T 3i6e_A 225 QPVRAHHFELMARLRGLT---DVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSG 278 (385)
T ss_dssp CCSCTTCHHHHHHHHTTC---SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHT
T ss_pred CCCCcccHHHHHHHHHhC---CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccC
Confidence 51 1345566676665 79999999999999999999875 688988654443
No 468
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=59.79 E-value=14 Score=30.83 Aligned_cols=60 Identities=13% Similarity=-0.038 Sum_probs=39.5
Q ss_pred HHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEecccc
Q 022271 103 VLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRF 166 (300)
Q Consensus 103 v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~f 166 (300)
++.+.+.|...++.......+..+++... ++ +....+.|.+++.++...|||.|.+|+.|
T Consensus 81 ~~~a~~~gad~v~l~~~~~~~~~~~~~~~--~~--~ig~sv~t~~~~~~a~~~gaD~i~~~~~f 140 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSGSFSPKQIRARFP--HL--HIGRSVHSLEEAVQAEKEDADYVLFGHVF 140 (221)
T ss_dssp HHHHHTTTCCEEEECTTSCCHHHHHHHCT--TC--EEEEEECSHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEeCCCccCHHHHHHHCC--CC--EEEEEcCCHHHHHHHHhCCCCEEEECCcc
Confidence 35556677777664332233455555431 33 33346789999999999999999999864
No 469
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=59.69 E-value=11 Score=34.60 Aligned_cols=61 Identities=11% Similarity=0.022 Sum_probs=43.1
Q ss_pred HHHHHHC-CCeEeec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccc
Q 022271 103 VLEAHSA-GVKVVPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRF 166 (300)
Q Consensus 103 v~~~~~~-G~~v~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~f 166 (300)
.+.+.+. |+..+.+ ...+..+.++++.+ ++||++.+.+.+..++..++..| +|.|++-...
T Consensus 204 ~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 269 (382)
T 2gdq_A 204 ERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRL---SVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMH 269 (382)
T ss_dssp HHHHTTCSCEEEEECCSCSSCHHHHHHHHTTC---SSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTT
T ss_pred HHHHhhccCCeEEECCCCcccHHHHHHHHhhC---CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccc
Confidence 3344455 6655543 12345566677665 79999999999999999999986 7888885433
No 470
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=59.56 E-value=56 Score=29.11 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHHhhcCCcEEe-eeecCCCcHHHHHHHHHcCCc---EEE-EcCCCCcHHHHHHHHHCCCeEeeccC-h
Q 022271 46 EAPDYLRDLIRKTRSLTERPFGV-GVVLAFPHNENIKAILSEKVA---VLQ-VSWGEYSEELVLEAHSAGVKVVPQDG-L 119 (300)
Q Consensus 46 ~~~~~l~~~i~~~r~~~~~P~gv-nl~~~~~~~~~~~~~~e~g~~---~i~-~~~G~~~~~~v~~~~~~G~~v~~~~~-~ 119 (300)
.++++..+.++.+++.++.|+.| .--.+....+.++.+++.+++ +|. ++.+ ..+++.+.+.+.|..++.... .
T Consensus 105 vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~vv~m~~~d 183 (310)
T 2h9a_B 105 RSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHSVVASAPLD 183 (310)
T ss_dssp CCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCEEEEECSSC
T ss_pred CCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCCEEEEChhH
Confidence 46777778888898877888866 431111246788999999886 663 4434 346777777888888775422 3
Q ss_pred hchHHHHHHhhCCCCCc---EEEccCCC
Q 022271 120 ISLLPMVVDLIGDRDIP---IIAAGGIV 144 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iP---ViaaGGI~ 144 (300)
+.++.+..+.+...++| ||..=|+.
T Consensus 184 v~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 184 INLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp HHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred HHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 44455444433222343 66666664
No 471
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=59.45 E-value=32 Score=25.08 Aligned_cols=67 Identities=18% Similarity=0.080 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. ..+|||.-.+-.+......++..|
T Consensus 37 ~~a~~~~~~~~~dlvl~D~~l~~-----------------~~g~~~~~~l~~~~--~~~~ii~~s~~~~~~~~~~~~~~g 97 (136)
T 1mvo_A 37 EEALKKAETEKPDLIVLDVMLPK-----------------LDGIEVCKQLRQQK--LMFPILMLTAKDEEFDKVLGLELG 97 (136)
T ss_dssp HHHHHHHHHHCCSEEEEESSCSS-----------------SCHHHHHHHHHHTT--CCCCEEEEECTTCCCCHHHHHHTT
T ss_pred HHHHHHHhhcCCCEEEEecCCCC-----------------CCHHHHHHHHHcCC--CCCCEEEEECCCCHHHHHHHHhCC
Confidence 44555555566677766654431 12345566666542 268998888888888888999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 98 ~~~~l~ 103 (136)
T 1mvo_A 98 ADDYMT 103 (136)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 998654
No 472
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=59.42 E-value=92 Score=27.34 Aligned_cols=159 Identities=14% Similarity=0.059 Sum_probs=83.6
Q ss_pred ccCCccceecCCCCC--CCCc---HHHHHHHHhCCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecC
Q 022271 6 MLGFEYGIVQAPLGP--DISG---PELVAAVANAGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLA 73 (300)
Q Consensus 6 ~lg~~~Pii~apM~~--g~s~---~~la~avs~aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~ 73 (300)
+-|+ +|-+.-||.- .+.. .+++.-..++|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-..
T Consensus 12 ~~Gv-~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 90 (303)
T 2wkj_A 12 LRGV-MAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV 90 (303)
T ss_dssp GCSE-EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred CCce-EEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 3454 3444457741 1222 35666666788777765532 367888888888777653 35665554432
Q ss_pred CCc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCC-CeEeec--------------------------
Q 022271 74 FPH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAG-VKVVPQ-------------------------- 116 (300)
Q Consensus 74 ~~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G-~~v~~~-------------------------- 116 (300)
... .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..+ +.++.-
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 170 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 170 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEE
Confidence 211 2344555566666665421 1111 22222211 123 443321
Q ss_pred ----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 ----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++++.. .+..|+ .|. ...+..++.+|++|++-|+..++.++
T Consensus 171 iK~s~gd~~~~~~~~~~~--~~f~v~-~G~---d~~~~~~l~~G~~G~is~~an~~P~~ 223 (303)
T 2wkj_A 171 LXQTSGDLYQMEQIRREH--PDLVLY-NGY---DNIFASGLLAGADGGIGSTYNIMGWR 223 (303)
T ss_dssp EEECCCCHHHHHHHHHHC--TTCEEE-ECC---GGGHHHHHHHTCCEEEETTHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHhC--CCeEEE-eCc---HHHHHHHHHCCCCEEEeCHHHhCHHH
Confidence 12233344444431 134443 332 34578899999999999999887754
No 473
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=59.42 E-value=98 Score=27.65 Aligned_cols=88 Identities=17% Similarity=0.055 Sum_probs=57.9
Q ss_pred HHHHHHHhCCceE--EecCCCCCCHHHHHHHHHHHHhhc-CCcEEeeeecCCCc-HHHHHHHHHcCCcEEEEcC------
Q 022271 26 ELVAAVANAGGLG--LLRAPDWEAPDYLRDLIRKTRSLT-ERPFGVGVVLAFPH-NENIKAILSEKVAVLQVSW------ 95 (300)
Q Consensus 26 ~la~avs~aGglG--~i~~~~~~~~~~l~~~i~~~r~~~-~~P~gvnl~~~~~~-~~~~~~~~e~g~~~i~~~~------ 95 (300)
+++.++.++|.-- +--+.|..+|+++.+.++.+++.. +.|+++-.-..... ....-.++++|++.|..+.
T Consensus 173 ~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~ 252 (337)
T 3ble_A 173 SLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGER 252 (337)
T ss_dssp HHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSST
T ss_pred HHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEeccccccc
Confidence 4666667777632 222335689999999999999877 66776644322221 4556677889999998753
Q ss_pred -CCC-cHHHHHHHHHC-CCeE
Q 022271 96 -GEY-SEELVLEAHSA-GVKV 113 (300)
Q Consensus 96 -G~~-~~~~v~~~~~~-G~~v 113 (300)
|.+ ..+++..++.. |...
T Consensus 253 aGN~~~E~lv~~L~~~~g~~t 273 (337)
T 3ble_A 253 AGNTPLEALVTTIHDKSNSKT 273 (337)
T ss_dssp TCBCBHHHHHHHHHHHSSCCC
T ss_pred ccchhHHHHHHHHHHhcCCCC
Confidence 333 36677777765 6543
No 474
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=59.23 E-value=1e+02 Score=27.91 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=73.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecCCCc---HHHHHHHHHc-CCc--EE-EEcCCCCcH---HHHHHHHH--CCCe
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLAFPH---NENIKAILSE-KVA--VL-QVSWGEYSE---ELVLEAHS--AGVK 112 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~~~~---~~~~~~~~e~-g~~--~i-~~~~G~~~~---~~v~~~~~--~G~~ 112 (300)
..+++++.+..++..+. +--.+++-..... .+.++.+.+. +.+ +. ..+.+-.++ .+.+.+.+ .++.
T Consensus 140 ~~~~e~~~~~a~~~~~~--Gf~~~KlK~g~~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~ 217 (379)
T 3r0u_A 140 CGNVAETIQNIQNGVEA--NFTAIKVKTGADFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVE 217 (379)
T ss_dssp CCCHHHHHHHHHHHHHT--TCCEEEEECSSCHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEE
T ss_pred CCCHHHHHHHHHHHHHc--CCCEEeeecCCCHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcE
Confidence 35788877777766543 2223444333222 3445556553 333 22 233232223 34455667 5777
Q ss_pred Eeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 113 VVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 113 v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+-+. ..+..+.++++.. ++||.+..-+.+..++..++..| +|.|++--..+.
T Consensus 218 ~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~G 274 (379)
T 3r0u_A 218 IIEQPVKYYDIKAMAEITKFS---NIPVVADESVFDAKDAERVIDEQACNMINIKLAKTG 274 (379)
T ss_dssp EEECCSCTTCHHHHHHHHHHC---SSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred EEECCCCcccHHHHHHHHhcC---CCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccC
Confidence 77641 1356677788776 79999999999999999999987 689998655543
No 475
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=59.14 E-value=36 Score=27.57 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=33.5
Q ss_pred hhchHHHHHHhhC--CCCCcEEEccCCC-ChHHHHHHHHCCCcEEEe
Q 022271 119 LISLLPMVVDLIG--DRDIPIIAAGGIV-DARGYVAALSLGAQGICL 162 (300)
Q Consensus 119 ~~~ll~~v~~~~~--~~~iPViaaGGI~-~g~~v~aal~lGAdgV~~ 162 (300)
-+.++.++++.-. ..++|||+-.+-. +...+..++..||+++..
T Consensus 134 G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~ 180 (206)
T 3mm4_A 134 GYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLD 180 (206)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEc
Confidence 4667777776410 1279999988887 888899999999998775
No 476
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=59.14 E-value=44 Score=30.40 Aligned_cols=78 Identities=14% Similarity=0.188 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec----cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ----DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAA 152 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~----~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aa 152 (300)
....+.+.+.|.++++.-|. .+-++.+.+.|+.++.. ...+.||..+.+. +.|||..=|.+|-+++..+
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD---~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~----gKPviLstGmstl~Ei~~A 153 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFD---EESVDLIEAHGIEIIKIASCSFTDWPLLERIARS----DKPVVASTAGARREDIDKV 153 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECS---HHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTS----CSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHcCCcEEeccCC---HHHHHHHHHcCCCEEEECcccccCHHHHHHHHhh----CCcEEEECCCCCHHHHHHH
Confidence 34567777889999998875 34577777788888764 2245677766643 7999999999999998877
Q ss_pred HH----CCCcEEEe
Q 022271 153 LS----LGAQGICL 162 (300)
Q Consensus 153 l~----lGAdgV~~ 162 (300)
.. .|.+ |.+
T Consensus 154 ve~i~~~g~~-viL 166 (350)
T 3g8r_A 154 VSFMLHRGKD-LTI 166 (350)
T ss_dssp HHHHHTTTCC-EEE
T ss_pred HHHHHHcCCC-EEE
Confidence 54 4665 444
No 477
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=59.01 E-value=40 Score=28.37 Aligned_cols=74 Identities=12% Similarity=0.000 Sum_probs=51.2
Q ss_pred HHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeec------cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCC
Q 022271 84 LSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQ------DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGA 157 (300)
Q Consensus 84 ~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~------~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGA 157 (300)
.+.|..+.... . ..+.++.+++....++.. ..-+.++.++++... ++|||+-.+-.+......++..|+
T Consensus 150 ~~~g~~v~~a~--~-~~eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~--~~piI~lt~~~~~~~~~~~~~~G~ 224 (254)
T 2ayx_A 150 GSLGYQCKTAN--D-GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGL--TLPVIGVTANALAEEKQRCLESGM 224 (254)
T ss_dssp HHHTSEEEEEC--C-SHHHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHC--CSCEEEEESSTTSHHHHHHHHCCC
T ss_pred HHcCCEEEEEC--C-HHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCC--CCcEEEEECCCCHHHHHHHHHcCC
Confidence 34677766554 2 356677776654444322 224567778877643 799999999999999999999999
Q ss_pred cEEEe
Q 022271 158 QGICL 162 (300)
Q Consensus 158 dgV~~ 162 (300)
+++..
T Consensus 225 ~~~l~ 229 (254)
T 2ayx_A 225 DSCLS 229 (254)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 98654
No 478
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=58.94 E-value=31 Score=29.11 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=43.3
Q ss_pred HHHHHHHHCCCeEeeccChh-chHHHHHHhhCCCCCcEEEccCCCCh-HHHHHHHHCCCcEEEeccccccCcc
Q 022271 101 ELVLEAHSAGVKVVPQDGLI-SLLPMVVDLIGDRDIPIIAAGGIVDA-RGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~~~~-~ll~~v~~~~~~~~iPViaaGGI~~g-~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+++|..-+..-++. .-+..+++.+. + .++..+||+-. .+...++..|||.+++|+....++.
T Consensus 126 ~~a~~a~~~g~~GvV~sat~p~e~~~ir~~~~--~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 126 YIKNVIREISPKGIVVGGTKLDHITQYRRDFE--K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNAGN 195 (222)
T ss_dssp HHHHHHHHHCCSEEEECTTCHHHHHHHHHHCT--T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTSSS
T ss_pred HHHHHHHHhCCCEEEECCCCHHHHHHHHHhCC--C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCCCC
Confidence 34444455554422211121 34566666653 4 68889999743 2567888999999999999998743
No 479
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=58.83 E-value=38 Score=27.55 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCC-CcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHC
Q 022271 77 NENIKAILSEKVAVLQVSWGE-YSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSL 155 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~-~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~l 155 (300)
.+.++.+.+.|++.|.+..-. .+....+. ...+.++.+.. ++||+.. +++..+..+
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~--------------~~~l~~~~~~~---~v~v~v~------~~~~~a~~~ 85 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEI--------------GKTLRQLTREY---DALFFVD------DRVDVALAV 85 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHH--------------HHHHHHHHHHT---TCEEEEE------SCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHH--------------HHHHHHHHHHc---CCeEEEc------ChHHHHHHc
Confidence 466778888888888765311 11222111 11222232222 6888874 566778889
Q ss_pred CCcEEEecc
Q 022271 156 GAQGICLGT 164 (300)
Q Consensus 156 GAdgV~~GT 164 (300)
|||+|+++.
T Consensus 86 gad~v~l~~ 94 (215)
T 1xi3_A 86 DADGVQLGP 94 (215)
T ss_dssp TCSEEEECT
T ss_pred CCCEEEECC
Confidence 999999984
No 480
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=58.81 E-value=63 Score=29.97 Aligned_cols=60 Identities=10% Similarity=0.046 Sum_probs=43.1
Q ss_pred HHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 106 AHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 106 ~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
+.+.|+..+.+. ..+..+.++++.+. ++||++.+.+.+..++..++..| +|.|++-...+
T Consensus 265 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 328 (441)
T 2hxt_A 265 LAEFDIAWIEEPTSPDDVLGHAAIRQGIT--PVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARV 328 (441)
T ss_dssp TGGGCCSCEECCSCTTCHHHHHHHHHHHT--TSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTS
T ss_pred HHhcCCCeeeCCCCHHHHHHHHHHHhhCC--CCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCccee
Confidence 344566655431 13556777777762 49999999999999999999876 78998854443
No 481
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=58.62 E-value=27 Score=25.78 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=44.8
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+....|. ...+.++.++++.....++|||+-.+-.+.+.+..++.
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~-----------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~ 96 (140)
T 3n53_A 34 NEKEALEQIDHHHPDLVILDMDIIG-----------------ENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLH 96 (140)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTC-----------------------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTT
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCC-----------------CcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHh
Confidence 3456677777778888888765431 11346666666543112799999999888888899999
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
.||+++..
T Consensus 97 ~g~~~~l~ 104 (140)
T 3n53_A 97 SGADDYLT 104 (140)
T ss_dssp CCCSEEEE
T ss_pred cCCCeeee
Confidence 99998765
No 482
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=58.35 E-value=90 Score=28.39 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCcEEeeeecC-----CCc---HHHHHHHHHc-CCcE-E--EEcCCCCcHHHHH---HH-HH
Q 022271 45 WEAPDYLRDLIRKTRSLTERPFGVGVVLA-----FPH---NENIKAILSE-KVAV-L--QVSWGEYSEELVL---EA-HS 108 (300)
Q Consensus 45 ~~~~~~l~~~i~~~r~~~~~P~gvnl~~~-----~~~---~~~~~~~~e~-g~~~-i--~~~~G~~~~~~v~---~~-~~ 108 (300)
..+++++.+.+++..+.. --.+++-.. ... .+.++.+.+. |+++ + ..+.+-.+.+.++ .+ .+
T Consensus 143 ~~~~e~~~~~a~~~~~~G--~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~ 220 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQG--FKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPG 220 (386)
T ss_dssp SCCHHHHHHHHHHHHHTT--CCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSS
T ss_pred CCCHHHHHHHHHHHHHCC--CCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhcc
Confidence 357888887777765532 223333222 111 2344555443 4443 2 2333322343333 34 34
Q ss_pred CCCeEeec-cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEeccccc
Q 022271 109 AGVKVVPQ-DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFV 167 (300)
Q Consensus 109 ~G~~v~~~-~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl 167 (300)
.++ .+-+ ...+.-+.++++.+ ++||.+..-+.+..++..++..| +|.|++--..+
T Consensus 221 ~~i-~iEeP~~~~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~ 277 (386)
T 3fv9_G 221 LDI-VLEAPCASWAETKSLRARC---ALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQ 277 (386)
T ss_dssp CCC-EEECCCSSHHHHHHHHTTC---CSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHH
T ss_pred CCc-EEecCCCCHHHHHHHHhhC---CCCEEeCCCcCCHHHHHHHHHhCCCCEEEECcccc
Confidence 465 5543 22344555666554 79999999999999999999976 78898854444
No 483
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=58.15 E-value=50 Score=23.83 Aligned_cols=68 Identities=12% Similarity=0.053 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++... ..+|||.-.+-.+......++..|
T Consensus 38 ~~a~~~~~~~~~dlvllD~~l~~-----------------~~g~~~~~~l~~~~~-~~~~ii~ls~~~~~~~~~~~~~~g 99 (130)
T 1dz3_A 38 QDCLQMLEEKRPDILLLDIIMPH-----------------LDGLAVLERIRAGFE-HQPNVIMLTAFGQEDVTKKAVELG 99 (130)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSS-----------------SCHHHHHHHHHHHCS-SCCEEEEEEETTCHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCEEEEecCCCC-----------------CCHHHHHHHHHhcCC-CCCcEEEEecCCCHHHHHHHHHcC
Confidence 45555555666777776655431 123456666665311 268899888888999999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 100 a~~~l~ 105 (130)
T 1dz3_A 100 ASYFIL 105 (130)
T ss_dssp CEEEEE
T ss_pred CCEEEe
Confidence 998654
No 484
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=57.96 E-value=18 Score=33.88 Aligned_cols=63 Identities=10% Similarity=0.012 Sum_probs=48.0
Q ss_pred HHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 103 VLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 103 v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+++.+.|+..+-+. ..+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++-...+.
T Consensus 260 ~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~---~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~G 326 (440)
T 3t6c_A 260 AKALEPYQLFFLEDPVAPENTEWLKMLRQQS---STPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIG 326 (440)
T ss_dssp HHHTGGGCCSEEECSSCGGGGGGHHHHHHHC---CSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGT
T ss_pred HHHhhhcCCCEEECCCChhhHHHHHHHHhhc---CCCEEeCcccCCHHHHHHHHHcCCccceeechhhhC
Confidence 344556777777641 2466778888876 79999999999999999999986 788888655543
No 485
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=57.80 E-value=96 Score=27.03 Aligned_cols=157 Identities=16% Similarity=0.094 Sum_probs=82.6
Q ss_pred CCccceecCCCCC--CCCc---HHHHHHHHh-CCceEEecCCC-----CCCHHHHHHHHHHHHhhc--CCcEEeeeecCC
Q 022271 8 GFEYGIVQAPLGP--DISG---PELVAAVAN-AGGLGLLRAPD-----WEAPDYLRDLIRKTRSLT--ERPFGVGVVLAF 74 (300)
Q Consensus 8 g~~~Pii~apM~~--g~s~---~~la~avs~-aGglG~i~~~~-----~~~~~~l~~~i~~~r~~~--~~P~gvnl~~~~ 74 (300)
|+ +|-+.-||.- .+.. .+++.-..+ +|.=|++.+|. .++.++-.+.++.+.+.. +.|+-++.-...
T Consensus 6 Gv-~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 84 (293)
T 1f6k_A 6 GI-FSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVN 84 (293)
T ss_dssp EE-EEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC
T ss_pred ce-EEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCC
Confidence 44 3444457741 1222 356666667 88777765532 367888888888877654 356655554332
Q ss_pred Cc--HHHHHHHHHcCCcEEEEcC---CCCc-HHHHHHHH----HCCCeEee----------------------------c
Q 022271 75 PH--NENIKAILSEKVAVLQVSW---GEYS-EELVLEAH----SAGVKVVP----------------------------Q 116 (300)
Q Consensus 75 ~~--~~~~~~~~e~g~~~i~~~~---G~~~-~~~v~~~~----~~G~~v~~----------------------------~ 116 (300)
.. .+..+.+.+.|++.+.+.. ..|+ +.+++..+ ..+..++. .
T Consensus 85 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 164 (293)
T 1f6k_A 85 LKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVK 164 (293)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEEE
Confidence 11 2345555566777665421 1111 22222111 12333321 1
Q ss_pred --cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEeccccccCcc
Q 022271 117 --DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEE 171 (300)
Q Consensus 117 --~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~GT~fl~t~E 171 (300)
.+.+..+.++++.. .+..|+ .|. ...+..++.+|++|++-|+..++.++
T Consensus 165 ~s~gd~~~~~~~~~~~--~~f~v~-~G~---d~~~~~~l~~G~~G~is~~~n~~P~~ 215 (293)
T 1f6k_A 165 FTAGDFYLLERLKKAY--PNHLIW-AGF---DEMMLPAASLGVDGAIGSTFNVNGVR 215 (293)
T ss_dssp ECSCCHHHHHHHHHHC--TTSEEE-ECC---GGGHHHHHHTTCSEEEESTHHHHHHH
T ss_pred ECCCCHHHHHHHHHhC--CCeEEE-ECc---HHHHHHHHHCCCcEEEeCHHHhhHHH
Confidence 12333444444432 134333 332 34588899999999999998887654
No 486
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=57.64 E-value=44 Score=30.49 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHH-HHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccC-CCChHHHH---H
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEE-LVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGG-IVDARGYV---A 151 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~-~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGG-I~~g~~v~---a 151 (300)
...++.+++.|++.+.+. |...+. .+.. .--..++..+++.+++ ++|||+.=| .++.+.+. .
T Consensus 83 ~~lv~~li~~Gv~Gl~v~-GTTGE~~~Ls~-----------eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~ 149 (360)
T 4dpp_A 83 DDLVNIQIQNGAEGVIVG-GTTGEGQLMSW-----------DEHIMLIGHTVNCFGG-SIKVIGNTGSNSTREAIHATEQ 149 (360)
T ss_dssp HHHHHHHHHTTCCEEEES-STTTTGGGSCH-----------HHHHHHHHHHHHHHTT-TSEEEEECCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEec-ccccChhhCCH-----------HHHHHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHHH
Confidence 456778888899988775 321100 0000 0012345556666543 699998444 44544443 3
Q ss_pred HHHCCCcEEEeccccccC
Q 022271 152 ALSLGAQGICLGTRFVAS 169 (300)
Q Consensus 152 al~lGAdgV~~GT~fl~t 169 (300)
+-.+|||++++-++|...
T Consensus 150 A~~~Gadavlvv~PyY~k 167 (360)
T 4dpp_A 150 GFAVGMHAALHINPYYGK 167 (360)
T ss_dssp HHHTTCSEEEEECCCSSC
T ss_pred HHHcCCCEEEEcCCCCCC
Confidence 445899999999998764
No 487
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=57.59 E-value=55 Score=28.70 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=39.4
Q ss_pred HHHHHH---HHHHHhhcCCcEEeeeecCCCcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEee
Q 022271 49 DYLRDL---IRKTRSLTERPFGVGVVLAFPHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP 115 (300)
Q Consensus 49 ~~l~~~---i~~~r~~~~~P~gvnl~~~~~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~ 115 (300)
|+++.. |+.+++.++.|+.|.- ...+.++.++++|+++|.-..|...++.++.+++.|+.++.
T Consensus 73 eE~~rv~pvi~~l~~~~~~piSIDT----~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVl 138 (282)
T 1aj0_A 73 EELQRVIPVVEAIAQRFEVWISVDT----SKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCL 138 (282)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEC----CCHHHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEeC----CCHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEE
Confidence 444444 4444444466776544 35788999999999999643342334567666777766654
No 488
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=57.58 E-value=18 Score=33.09 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=47.1
Q ss_pred HHHHHHHHCCCeEeecc---ChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEecccccc
Q 022271 101 ELVLEAHSAGVKVVPQD---GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLGTRFVA 168 (300)
Q Consensus 101 ~~v~~~~~~G~~v~~~~---~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~GT~fl~ 168 (300)
.+.+.+.+.|+..+.+. ..+..+.++++.+ ++||.+..-+.+..++..++..| +|.|++-...+.
T Consensus 209 ~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~---~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~G 277 (377)
T 3my9_A 209 KILRDVDAFRPTFIEQPVPRRHLDAMAGFAAAL---DTPILADESCFDAVDLMEVVRRQAADAISVKIMKCG 277 (377)
T ss_dssp HHHHHHHTTCCSCEECCSCTTCHHHHHHHHHHC---SSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHT
T ss_pred HHHHHHhhcCCCEEECCCCccCHHHHHHHHHhC---CCCEEECCccCCHHHHHHHHHcCCCCEEEecccccC
Confidence 44555666666666541 1355677777776 79999999999999999999875 788888654443
No 489
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=57.50 E-value=62 Score=28.56 Aligned_cols=86 Identities=16% Similarity=0.182 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCC--CcH---HHHHHHHHCCC---------eEeec------c---ChhchHHHHHHhhCCC
Q 022271 77 NENIKAILSEKVAVLQVSWGE--YSE---ELVLEAHSAGV---------KVVPQ------D---GLISLLPMVVDLIGDR 133 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~--~~~---~~v~~~~~~G~---------~v~~~------~---~~~~ll~~v~~~~~~~ 133 (300)
.+.++.+...+-+++... |. .+. ..++.+.+.|- .+.+. . -.+..+|.+++ .
T Consensus 121 ~~LLr~~a~~gkPVilK~-G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~--- 195 (288)
T 3tml_A 121 TDFIHACARSGKPVNIKK-GQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-T--- 195 (288)
T ss_dssp HHHHHHHHTSSSCEEEEC-CTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-G---
T ss_pred HHHHHHHHccCCcEEEeC-CCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-c---
Confidence 345666666676766654 32 233 33444444432 23322 1 13556677665 5
Q ss_pred CCcEEEc-----------cCCCCh------HHHHHHHHCCCcEEEeccccc
Q 022271 134 DIPIIAA-----------GGIVDA------RGYVAALSLGAQGICLGTRFV 167 (300)
Q Consensus 134 ~iPViaa-----------GGI~~g------~~v~aal~lGAdgV~~GT~fl 167 (300)
++||+.. ||.+.| .-..+|.++||||+++=+.|-
T Consensus 196 ~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~ 246 (288)
T 3tml_A 196 NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHPN 246 (288)
T ss_dssp SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEESS
T ss_pred CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeeccC
Confidence 7999882 333334 134688899999999966654
No 490
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=57.48 E-value=17 Score=30.20 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCcEEEEcCCCC-cHHH--HHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHH
Q 022271 77 NENIKAILSEKVAVLQVSWGEY-SEEL--VLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAAL 153 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~-~~~~--v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal 153 (300)
.+.++.+++.|++.|.+..-.. +..+ +. .....++++.+.. ++||+.. +.+..++
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~---~v~v~v~------~~~~~a~ 91 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARI-------------KFAEKAQAACREA---GVPFIVN------DDVELAL 91 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHH-------------HHHHHHHHHHHHH---TCCEEEE------SCHHHHH
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHH-------------HHHHHHHHHHHHc---CCeEEEc------CHHHHHH
Confidence 4568888888999887753111 1111 00 0122233343333 6888885 3566788
Q ss_pred HCCCcEEEeccc
Q 022271 154 SLGAQGICLGTR 165 (300)
Q Consensus 154 ~lGAdgV~~GT~ 165 (300)
.+|||+|++|..
T Consensus 92 ~~gad~v~l~~~ 103 (227)
T 2tps_A 92 NLKADGIHIGQE 103 (227)
T ss_dssp HHTCSEEEECTT
T ss_pred HcCCCEEEECCC
Confidence 899999999864
No 491
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=57.29 E-value=17 Score=30.05 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=44.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.. ++|||+-.+-.+...+..++..|
T Consensus 39 ~~al~~l~~~~~dlvilD~~l~~-----------------~~g~~~~~~lr~~~---~~~ii~lt~~~~~~~~~~~~~~G 98 (238)
T 2gwr_A 39 TQALTAVRELRPDLVLLDLMLPG-----------------MNGIDVCRVLRADS---GVPIVMLTAKTDTVDVVLGLESG 98 (238)
T ss_dssp GGHHHHHHHHCCSEEEEESSCSS-----------------SCHHHHHHHHHTTC---CCCEEEEEETTCCSCHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHHhCC---CCcEEEEeCCCCHHHHHHHHHCC
Confidence 34455555556666666554431 12345666666542 68999988888988999999999
Q ss_pred CcEEEe
Q 022271 157 AQGICL 162 (300)
Q Consensus 157 AdgV~~ 162 (300)
|++...
T Consensus 99 a~~~l~ 104 (238)
T 2gwr_A 99 ADDYIM 104 (238)
T ss_dssp CCEEEE
T ss_pred CCEEEe
Confidence 998764
No 492
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=57.11 E-value=20 Score=27.84 Aligned_cols=39 Identities=21% Similarity=0.354 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEee
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVP 115 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~ 115 (300)
.+.++.+.+.|++.+++..|...+++.+.++++|+.++.
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCEEEc
Confidence 456778888899999888787778888889999999875
No 493
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=57.04 E-value=52 Score=32.29 Aligned_cols=86 Identities=24% Similarity=0.371 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHH----HHCC--CeEeec-----------------cCh------------hc
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEA----HSAG--VKVVPQ-----------------DGL------------IS 121 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~----~~~G--~~v~~~-----------------~~~------------~~ 121 (300)
.+.++..++.++++|.++|=.-+. -+..+ .+.| +.++.. ++. +.
T Consensus 196 ~~dl~f~~~~~vD~Ia~SFVr~a~-Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e 274 (606)
T 3t05_A 196 AEDIRFGIKENVDFIAASFVRRPS-DVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPE 274 (606)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHH-HHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGG
T ss_pred HHHHHHHHHcCCCEEEECCCCCHH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHH
Confidence 467888899999999999854333 33333 3343 555544 110 11
Q ss_pred hHHH----HHHhhCCCCCcEEEccCC---------CCh---HHHHHHHHCCCcEEEec
Q 022271 122 LLPM----VVDLIGDRDIPIIAAGGI---------VDA---RGYVAALSLGAQGICLG 163 (300)
Q Consensus 122 ll~~----v~~~~~~~~iPViaaGGI---------~~g---~~v~aal~lGAdgV~~G 163 (300)
-+|. +.+..+....|||.|-=+ -|. .|++.|..-|+|+||+.
T Consensus 275 ~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLS 332 (606)
T 3t05_A 275 KVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLS 332 (606)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEec
Confidence 2222 222111126899985444 333 36788888999999996
No 494
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=56.82 E-value=43 Score=24.58 Aligned_cols=43 Identities=9% Similarity=0.072 Sum_probs=31.6
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++.++++.....++|||+-.+-.+......++..||+++..
T Consensus 78 ~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~ 120 (149)
T 1k66_A 78 REVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV 120 (149)
T ss_dssp HHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe
Confidence 4455555543100268999999999999999999999998764
No 495
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=56.70 E-value=30 Score=31.56 Aligned_cols=112 Identities=10% Similarity=-0.006 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHhhcCCcEEeeeecCC-C---cHHHHHHHHHc-CCcE-E--EEcCCCCcH---HHHHHHHH--CCCeE
Q 022271 47 APDYLRDLIRKTRSLTERPFGVGVVLAF-P---HNENIKAILSE-KVAV-L--QVSWGEYSE---ELVLEAHS--AGVKV 113 (300)
Q Consensus 47 ~~~~l~~~i~~~r~~~~~P~gvnl~~~~-~---~~~~~~~~~e~-g~~~-i--~~~~G~~~~---~~v~~~~~--~G~~v 113 (300)
+++++.+..++.++. .--++++-... . ..+.++.+.+. |.++ + ..+.|..++ ++.+.+.+ .++..
T Consensus 145 ~~~~~~~~a~~~~~~--Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~ 222 (389)
T 2oz8_A 145 DDDAFVSLFSHAASI--GYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLW 222 (389)
T ss_dssp CHHHHHHHHHHHHHT--TCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSE
T ss_pred CHHHHHHHHHHHHHh--CCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 777777766666543 12234443322 1 13445555553 3432 2 223232222 44555667 66666
Q ss_pred eec---cChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC-CcEEEec
Q 022271 114 VPQ---DGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG-AQGICLG 163 (300)
Q Consensus 114 ~~~---~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG-AdgV~~G 163 (300)
+.+ ...+..+.++++.+. ++||++.+.+ +..++..++..| +|.|++.
T Consensus 223 iEqP~~~~~~~~~~~l~~~~~--~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 223 VEDPILRHDHDGLRTLRHAVT--WTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp EESCBCTTCHHHHHHHHHHCC--SSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred EeCCCCCcCHHHHHHHHhhCC--CCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 654 124556677776641 5999999999 999999999987 7999997
No 496
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=56.64 E-value=49 Score=29.03 Aligned_cols=71 Identities=20% Similarity=0.124 Sum_probs=49.1
Q ss_pred CcHHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHH
Q 022271 75 PHNENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALS 154 (300)
Q Consensus 75 ~~~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~ 154 (300)
...+.++.+.+..+++|.+....|. ..-+.++..+++.-...++|||+-.|-.+...+..++.
T Consensus 51 ~~~~al~~~~~~~~dlvl~D~~mp~-----------------~~G~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~a~~ 113 (358)
T 3bre_A 51 DPQQAVAVANQIKPTVILQDLVMPG-----------------VDGLTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFA 113 (358)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCSS-----------------SBHHHHHHHHTTSTTTTTSCEEEEESSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCC-----------------CCHHHHHHHHhcCcccCCCcEEEEeCCCCHHHHHHHHh
Confidence 3456667777777888887765542 11245555555421112689999999999999999999
Q ss_pred CCCcEEEe
Q 022271 155 LGAQGICL 162 (300)
Q Consensus 155 lGAdgV~~ 162 (300)
+||+....
T Consensus 114 ~Ga~~~l~ 121 (358)
T 3bre_A 114 AGANDYLV 121 (358)
T ss_dssp TTCSEEEE
T ss_pred cChheEee
Confidence 99998765
No 497
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=56.56 E-value=55 Score=23.88 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=32.6
Q ss_pred hchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCCCcEEEe
Q 022271 120 ISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICL 162 (300)
Q Consensus 120 ~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lGAdgV~~ 162 (300)
+.++.++++... ..+|||+-.+-.+......++..||++...
T Consensus 68 ~~~~~~lr~~~~-~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~ 109 (133)
T 2r25_B 68 LLSTKMIRRDLG-YTSPIVALTAFADDSNIKECLESGMNGFLS 109 (133)
T ss_dssp HHHHHHHHHHSC-CCSCEEEEESCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhhcC-CCCCEEEEECCCCHHHHHHHHHcCCCEEEe
Confidence 456666665321 268999999999999999999999998654
No 498
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=56.41 E-value=40 Score=24.21 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHHHCCCeEeeccChhchHHHHHHhhCCCCCcEEEccCCCChHHHHHHHHCC
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLG 156 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~~~G~~v~~~~~~~~ll~~v~~~~~~~~iPViaaGGI~~g~~v~aal~lG 156 (300)
.+.++.+.+..+++|.+....|. ..-+.++.++++.-...++|||.-.+-.+...+..++..|
T Consensus 41 ~~a~~~~~~~~~dlvl~D~~l~~-----------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g 103 (129)
T 1p6q_A 41 EQGMKIMAQNPHHLVISDFNMPK-----------------MDGLGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALG 103 (129)
T ss_dssp HHHHHHHHTSCCSEEEECSSSCS-----------------SCHHHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCEEEEeCCCCC-----------------CCHHHHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcC
Confidence 45555555666777776654431 1123455555543111268999999999999999999999
Q ss_pred CcEEE
Q 022271 157 AQGIC 161 (300)
Q Consensus 157 AdgV~ 161 (300)
|++..
T Consensus 104 ~~~~l 108 (129)
T 1p6q_A 104 ANNVL 108 (129)
T ss_dssp CSCEE
T ss_pred CCEEE
Confidence 98754
No 499
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=56.21 E-value=60 Score=31.03 Aligned_cols=86 Identities=15% Similarity=0.186 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCcHHHHHHHH----HC--CCeEeec-----------------c------Ch------hc
Q 022271 77 NENIKAILSEKVAVLQVSWGEYSEELVLEAH----SA--GVKVVPQ-----------------D------GL------IS 121 (300)
Q Consensus 77 ~~~~~~~~e~g~~~i~~~~G~~~~~~v~~~~----~~--G~~v~~~-----------------~------~~------~~ 121 (300)
.+.++..++.++++|.++|=.-+ +-+..++ +. .+.++.. + +. +.
T Consensus 195 ~~dl~~~~~~~vD~i~~sfVr~a-~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e 273 (499)
T 3hqn_D 195 RVDLQFGVEQGVDMIFASFIRSA-EQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAE 273 (499)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSH-HHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHH
T ss_pred HHHHHHHHHcCCCEEEecCCCCH-HHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHH
Confidence 46788999999999999985533 3343333 22 3556553 0 10 11
Q ss_pred hHHH----HHHhhCCCCCcEEEccCC---------CChH---HHHHHHHCCCcEEEec
Q 022271 122 LLPM----VVDLIGDRDIPIIAAGGI---------VDAR---GYVAALSLGAQGICLG 163 (300)
Q Consensus 122 ll~~----v~~~~~~~~iPViaaGGI---------~~g~---~v~aal~lGAdgV~~G 163 (300)
-+|. +....+....|||.|--+ -+.. |++.|..-|+|+|++.
T Consensus 274 ~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLS 331 (499)
T 3hqn_D 274 KVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLS 331 (499)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEe
Confidence 1222 221111126899985443 3433 6788888999999993
No 500
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=56.13 E-value=1e+02 Score=26.70 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=27.4
Q ss_pred CcEEEccCCCChH----------HHHHHHHCCCcEEEeccccccCc
Q 022271 135 IPIIAAGGIVDAR----------GYVAALSLGAQGICLGTRFVASE 170 (300)
Q Consensus 135 iPViaaGGI~~g~----------~v~aal~lGAdgV~~GT~fl~t~ 170 (300)
-.++...||+-.. ....++..|||.+++|+.+..++
T Consensus 178 ~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~ 223 (259)
T 3tfx_A 178 DFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLAS 223 (259)
T ss_dssp SSEEEECCCCCC-----------CHHHHHHTTCSEEEECHHHHTSS
T ss_pred ccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCC
Confidence 4477889997532 16788999999999999877654
Done!