Query 022272
Match_columns 300
No_of_seqs 160 out of 807
Neff 6.4
Searched_HMMs 13730
Date Mon Mar 25 16:43:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022272.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022272hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 79.3 8.3 0.0006 27.7 9.7 40 108-147 3-42 (107)
2 d1fpoa2 a.23.1.1 (A:77-171) HS 71.7 14 0.00099 25.9 11.0 78 96-180 9-86 (95)
3 d1fxka_ a.2.5.1 (A:) Prefoldin 49.5 39 0.0028 23.8 11.9 41 172-212 63-103 (107)
4 d1yvia1 a.24.10.2 (A:2-143) Hi 42.7 58 0.0042 23.8 11.6 29 95-123 34-65 (142)
5 d1vcsa1 a.47.2.1 (A:8-96) Vesi 40.4 34 0.0025 23.6 6.2 76 133-222 4-87 (89)
6 d1gs9a_ a.24.1.1 (A:) Apolipop 38.0 69 0.005 23.4 10.6 21 79-99 5-25 (144)
7 d1lrza1 a.2.7.4 (A:245-309) Me 31.1 64 0.0047 21.0 9.5 50 173-222 2-57 (65)
8 d1sumb_ a.7.12.1 (B:) PhoU hom 30.5 1.1E+02 0.008 23.6 8.7 49 133-185 12-60 (225)
9 d1u5pa1 a.7.1.1 (A:1662-1771) 26.2 87 0.0064 20.9 10.5 57 159-215 34-94 (110)
10 d1ykhb1 a.252.1.1 (B:2-130) RN 26.2 1.1E+02 0.0083 22.2 8.1 61 159-219 59-122 (129)
11 d1grja1 a.2.1.1 (A:2-79) GreA 26.0 42 0.0031 22.7 4.4 60 196-258 9-69 (78)
12 d2efla1 a.238.1.4 (A:1-288) Fo 25.7 1.4E+02 0.01 23.1 17.2 143 68-222 59-201 (288)
13 d2f23a1 a.2.1.1 (A:3-77) GreA 24.3 30 0.0022 23.4 3.2 21 237-257 47-67 (75)
14 d1vmaa1 a.24.13.1 (A:1-81) Sig 23.5 11 0.0008 25.7 0.8 47 76-126 1-54 (81)
15 d1f5na1 a.114.1.1 (A:284-583) 23.3 1.6E+02 0.012 23.0 12.9 8 86-93 160-167 (300)
16 d1t72a_ a.7.12.1 (A:) Phosphat 22.9 1.5E+02 0.011 22.4 13.7 44 81-124 22-65 (215)
17 d1seta1 a.2.7.1 (A:1-110) Sery 21.9 1.2E+02 0.0087 20.9 11.1 11 133-143 41-51 (110)
18 d1xwma_ a.7.12.1 (A:) Phosphat 20.7 1.5E+02 0.011 22.2 7.7 49 132-184 9-57 (212)
19 d2p90a1 c.56.8.1 (A:6-274) Hyp 20.3 89 0.0065 25.2 6.3 24 134-157 224-247 (269)
20 d2azeb1 e.63.1.2 (B:201-301) T 20.3 99 0.0072 21.7 5.7 32 176-207 3-34 (101)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=79.28 E-value=8.3 Score=27.70 Aligned_cols=40 Identities=13% Similarity=0.203 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 108 VLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWY 147 (300)
Q Consensus 108 Ireme~~l~kar~alA~v~A~~k~le~k~~~~~~~i~~~e 147 (300)
+++.-..+..++..+..+......++.++.+...-+.+++
T Consensus 3 lqe~~~~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~ 42 (107)
T d1fxka_ 3 VQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELS 42 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666666666666666666666655555444
No 2
>d1fpoa2 a.23.1.1 (A:77-171) HSC20 (HSCB), C-terminal oligomerisation domain {Escherichia coli [TaxId: 562]}
Probab=71.72 E-value=14 Score=25.95 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=52.8
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Q 022272 96 SFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADN 175 (300)
Q Consensus 96 ~~EDP~~mLeQ~Ireme~~l~kar~alA~v~A~~k~le~k~~~~~~~i~~~e~rA~~AL~~G~EdLAreAL~rk~~~e~~ 175 (300)
.+.||.=+++|+ +.++.|..+..+- ....+..-..+.+..+..+......++.+++-+-|...+.+..-+.+-
T Consensus 9 T~~DpeFLMeqM--E~RE~lee~~~~~-----d~~~l~~l~~ei~~~~~~~~~~l~~~~~~~d~~~A~~~~~kLkF~~kl 81 (95)
T d1fpoa2 9 TVRDTAFLMEQL--ELREELDEIEQAK-----DEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTCRKLRFLDKL 81 (95)
T ss_dssp CCSCHHHHHHHH--HHHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHH--HHHHHHHHhhcCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhHHHHHH
Confidence 466998888865 5555566554320 112334445557777778888888899999999999998888777654
Q ss_pred HHHHH
Q 022272 176 ANALK 180 (300)
Q Consensus 176 ~~~le 180 (300)
...++
T Consensus 82 ~~ei~ 86 (95)
T d1fpoa2 82 RSSAE 86 (95)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 3
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=49.55 E-value=39 Score=23.79 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 172 YADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKD 212 (300)
Q Consensus 172 ~e~~~~~le~ql~~~~~~v~~L~~~l~~Le~ki~e~k~k~~ 212 (300)
..+-.+.++..++.....+..|..++..++.++.+++.+..
T Consensus 63 ~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 63 KDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666666666666666666666655543
No 4
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=42.69 E-value=58 Score=23.84 Aligned_cols=29 Identities=3% Similarity=0.024 Sum_probs=21.4
Q ss_pred cccCCH---HHHHHHHHHHHHHHHHHHHHHHH
Q 022272 95 SSFEDP---EKILEQAVLEMNDDLVKMRQATA 123 (300)
Q Consensus 95 d~~EDP---~~mLeQ~Ireme~~l~kar~alA 123 (300)
+...|| ..|++.++.++.+.+...+.++.
T Consensus 34 ~~~~~~~fl~eli~~Fl~~~~~~l~~l~~al~ 65 (142)
T d1yvia1 34 DEGGTPGFVSEVVTLFCDDADRIINEIATLLE 65 (142)
T ss_dssp C---CTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333466 47899999999999999888864
No 5
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.36 E-value=34 Score=23.64 Aligned_cols=76 Identities=8% Similarity=0.182 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHH
Q 022272 133 ENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTR--------LLESKI 204 (300)
Q Consensus 133 e~k~~~~~~~i~~~e~rA~~AL~~G~EdLAreAL~rk~~~e~~~~~le~ql~~~~~~v~~L~~~l~--------~Le~ki 204 (300)
|++|..+...+..--.++.. ..|++.- ..+...+..++++...+++|.-.++ .+.+||
T Consensus 4 E~~y~~l~a~i~~kl~~i~~--~~geerk------------~~l~~ie~~leEA~ell~qMelEvr~~p~s~R~~~~~kl 69 (89)
T d1vcsa1 4 EQDFAVLTAEITSKIARVPR--LPPDEKK------------QMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRM 69 (89)
T ss_dssp HHHHHHHHHHHHHHHHHGGG--SCTTTHH------------HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc--CCchHHH------------HHHHHHHHhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 45555555555554444432 2344321 1223344445555555555544433 567888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 022272 205 QEARSKKDTLKARAQSAK 222 (300)
Q Consensus 205 ~e~k~k~~~LkAr~~~Ak 222 (300)
..+++.++.|+.....|+
T Consensus 70 r~Yk~dl~~lk~elk~a~ 87 (89)
T d1vcsa1 70 RSYKQEMGKLETDFKRSR 87 (89)
T ss_dssp HHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 888888888887766654
No 6
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=37.99 E-value=69 Score=23.41 Aligned_cols=21 Identities=10% Similarity=0.030 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHhcccCC
Q 022272 79 FDRLARVVKSYANAILSSFED 99 (300)
Q Consensus 79 f~Rl~~li~a~~n~~ld~~ED 99 (300)
|.-+.+.|+-+++.+-+.+.+
T Consensus 5 ~e~~~d~f~~y~~~l~~~a~~ 25 (144)
T d1gs9a_ 5 WELALGRFWDYLRWVQTLSEQ 25 (144)
T ss_dssp HHHHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHHHHHHhHHH
Confidence 444555555555555444433
No 7
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=31.09 E-value=64 Score=20.99 Aligned_cols=50 Identities=12% Similarity=0.173 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 173 ADNANALKAQLDQQKNVVNNLVSNTR------LLESKIQEARSKKDTLKARAQSAK 222 (300)
Q Consensus 173 e~~~~~le~ql~~~~~~v~~L~~~l~------~Le~ki~e~k~k~~~LkAr~~~Ak 222 (300)
.+.+..|+..+..+...+..+...|. +-..++.++.++++.+..|..-|+
T Consensus 2 ~eYl~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~Ea~ 57 (65)
T d1lrza1 2 DEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGK 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666666666666654 456666777777776666655544
No 8
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=30.54 E-value=1.1e+02 Score=23.59 Aligned_cols=49 Identities=18% Similarity=0.298 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 133 ENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQ 185 (300)
Q Consensus 133 e~k~~~~~~~i~~~e~rA~~AL~~G~EdLAreAL~rk~~~e~~~~~le~ql~~ 185 (300)
.+.+-..-..+.+--..+..|+..+|.++|+++... ++.+..++..++.
T Consensus 12 ~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~V~~~----d~~Id~l~~~I~~ 60 (225)
T d1sumb_ 12 KKGVLKAGWFIEKMFRNSISSLVERNESLAREVIAD----EEVVDQMEVEIQE 60 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHh----HHHHHHHHHHHHH
Confidence 344444555566667788899999999999998765 5555555555543
No 9
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=26.18 E-value=87 Score=20.92 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q 022272 159 EDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVS----NTRLLESKIQEARSKKDTLK 215 (300)
Q Consensus 159 EdLAreAL~rk~~~e~~~~~le~ql~~~~~~v~~L~~----~l~~Le~ki~e~k~k~~~Lk 215 (300)
.+-+..-+.+...++..+...+..++.+......|.. ....++.++.++...-+.|.
T Consensus 34 ~~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~ 94 (110)
T d1u5pa1 34 LASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIK 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666666666666666665555543 12233444444444444443
No 10
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.17 E-value=1.1e+02 Score=22.24 Aligned_cols=61 Identities=16% Similarity=0.245 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 159 EDLAREALKRRKSYADNANAL---KAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQ 219 (300)
Q Consensus 159 EdLAreAL~rk~~~e~~~~~l---e~ql~~~~~~v~~L~~~l~~Le~ki~e~k~k~~~LkAr~~ 219 (300)
.+||+..+..-++.+.-+..| ...-+.+...+.+|...+...+.++.+.-.+.+.|..+.+
T Consensus 59 ~elA~dii~kakqId~LI~sLP~~~~see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~ll~~i~ 122 (129)
T d1ykhb1 59 DELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVD 122 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666655555555444 2233445555666666666666666555555555554433
No 11
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.00 E-value=42 Score=22.70 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhHHHHHH
Q 022272 196 NTRLLESKIQEARS-KKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVLTMESQAD 258 (300)
Q Consensus 196 ~l~~Le~ki~e~k~-k~~~LkAr~~~Akaq~~v~~~~~~~~~~~a~~~feR~eeki~~~ea~ae 258 (300)
.+.+|+..|..++. ++-.+..+...|+..--+.+ +.....|......++.||..++....
T Consensus 9 g~~~L~~EL~~L~~~~rpei~~~I~~Ar~~GDlsE---NaeY~aAKe~q~~~e~RI~eLe~~L~ 69 (78)
T d1grja1 9 GAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE---NAEYHAAREQQGFCEGRIKDIEAKLS 69 (78)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHTTCCGGG---CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHcCChhh---hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555666665554 34444443333322210100 11124566667777777776665543
No 12
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.71 E-value=1.4e+02 Score=23.12 Aligned_cols=143 Identities=6% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCCcccccCchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 68 GGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKCKAAEQASEDWY 147 (300)
Q Consensus 68 ~~~~~~~~Msif~Rl~~li~a~~n~~ld~~EDP~~mLeQ~Ireme~~l~kar~alA~v~A~~k~le~k~~~~~~~i~~~e 147 (300)
.+......+++.+-+..++...-..+-....--..+..+.+..+..-+...+...-.+......+.+.+......+.+..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~h~~~a~~l~~~i~~~l~~~~~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k 138 (288)
T d2efla1 59 SKEEEEYKYTSCKAFISNLNEMNDYAGQHEVISENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSK 138 (288)
T ss_dssp -----CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 148 RKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARSKKDTLKARAQSAK 222 (300)
Q Consensus 148 ~rA~~AL~~G~EdLAreAL~rk~~~e~~~~~le~ql~~~~~~v~~L~~~l~~Le~ki~e~k~k~~~LkAr~~~Ak 222 (300)
..=..+ ........................+++++..+.....++.+.+..........+.++
T Consensus 139 ~~Y~~~------------~~e~e~~~~~~~~~~~~~~~~~~~~~K~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~ 201 (288)
T d2efla1 139 RRFERD------------CKEADRAQQYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQ 201 (288)
T ss_dssp HHHHHH------------HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH------------HHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 13
>d2f23a1 a.2.1.1 (A:3-77) GreA transcript cleavage protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.27 E-value=30 Score=23.37 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=13.5
Q ss_pred CcHHHHHHHHHHHHHhHHHHH
Q 022272 237 SSALSAFEKMEEKVLTMESQA 257 (300)
Q Consensus 237 ~~a~~~feR~eeki~~~ea~a 257 (300)
..|......++.||..++...
T Consensus 47 ~aAke~q~~~e~rI~eLe~~L 67 (75)
T d2f23a1 47 EAAKQEKARIEARIDSLEDIL 67 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356666777777777666554
No 14
>d1vmaa1 a.24.13.1 (A:1-81) Signal recognition particle receptor, FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=23.55 E-value=11 Score=25.74 Aligned_cols=47 Identities=19% Similarity=0.252 Sum_probs=27.8
Q ss_pred CchHHHHHHHHHH-------HHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 76 MNLFDRLARVVKS-------YANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVL 126 (300)
Q Consensus 76 Msif~Rl~~li~a-------~~n~~ld~~EDP~~mLeQ~Ireme~~l~kar~alA~v~ 126 (300)
||+|+|++.-+.- .++.++.+- ++=+..+.|+++.|..+-..+..+.
T Consensus 1 Mg~f~klk~gL~KTr~~~~~~l~~lf~~~----~iDe~~leeLEe~LI~aDvGv~tt~ 54 (81)
T d1vmaa1 1 MGLFDFLKKGLQKTKETFFGRVVKLLKGK----KLDDETREELEELLIQADVGVETTE 54 (81)
T ss_dssp -CHHHHHHHHHHHHHHHTHHHHHHHHTTC----CCCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCHHHHHHHHHHHHHccCCHHHHH
Confidence 8999999876533 333333221 1124556688998888877665543
No 15
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.34 E-value=1.6e+02 Score=22.99 Aligned_cols=8 Identities=13% Similarity=-0.134 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 022272 86 VKSYANAI 93 (300)
Q Consensus 86 i~a~~n~~ 93 (300)
+....+..
T Consensus 160 ~~~~~~~~ 167 (300)
T d1f5na1 160 LKKKYYEE 167 (300)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 33333333
No 16
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=22.88 E-value=1.5e+02 Score=22.41 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 81 RLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQ 124 (300)
Q Consensus 81 Rl~~li~a~~n~~ld~~EDP~~mLeQ~Ireme~~l~kar~alA~ 124 (300)
|+..++...++.+++.++++..-+-+.|.+.++.+......+-.
T Consensus 22 ~M~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~ 65 (215)
T d1t72a_ 22 KMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIER 65 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhHHHHHHHHHHHHH
Confidence 44556777777777777654333333455555555555554443
No 17
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=21.87 E-value=1.2e+02 Score=20.94 Aligned_cols=11 Identities=0% Similarity=0.193 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 022272 133 ENKCKAAEQAS 143 (300)
Q Consensus 133 e~k~~~~~~~i 143 (300)
..+++.++++.
T Consensus 41 ~~~~e~l~~~r 51 (110)
T d1seta1 41 KKRLQEVQTER 51 (110)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 18
>d1xwma_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.67 E-value=1.5e+02 Score=22.19 Aligned_cols=49 Identities=22% Similarity=0.258 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 132 LENKCKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLD 184 (300)
Q Consensus 132 le~k~~~~~~~i~~~e~rA~~AL~~G~EdLAreAL~rk~~~e~~~~~le~ql~ 184 (300)
+..++...-..+.+--..+..|+..+|.++|.++..+ ++.+..+...+.
T Consensus 9 l~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~v~~~----d~~id~l~~~I~ 57 (212)
T d1xwma_ 9 LHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDG----DGSIDALEEEVN 57 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHT----THHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHh----hHHHHHHHHHHH
Confidence 3344455555566666788888999999998887654 444444444443
No 19
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=20.30 E-value=89 Score=25.22 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Q 022272 134 NKCKAAEQASEDWYRKAQLALQKG 157 (300)
Q Consensus 134 ~k~~~~~~~i~~~e~rA~~AL~~G 157 (300)
-..+.+.+++++|+.+....++..
T Consensus 224 id~~~L~e~Ae~~e~~i~~l~e~~ 247 (269)
T d2p90a1 224 LPLLALERDAEKVHRQLMEQTEES 247 (269)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHHHHHHhhC
Confidence 345677777777777766655543
No 20
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.26 E-value=99 Score=21.68 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022272 176 ANALKAQLDQQKNVVNNLVSNTRLLESKIQEA 207 (300)
Q Consensus 176 ~~~le~ql~~~~~~v~~L~~~l~~Le~ki~e~ 207 (300)
+..|+.+++.+......|...+..+..+|..+
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~l 34 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLL 34 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555555555555555555444443
Done!