Query 022273
Match_columns 300
No_of_seqs 68 out of 70
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 16:44:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022273.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022273hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 45.0 2.5 0.00018 33.6 0.4 39 119-157 37-75 (304)
2 d1jz8a5 c.1.8.3 (A:334-625) be 39.1 5.6 0.00041 31.9 1.7 39 118-156 37-75 (292)
3 d1yq2a2 b.1.4.1 (A:220-312) be 30.1 6.1 0.00044 27.6 0.4 15 273-287 61-75 (93)
4 d2je8a5 c.1.8.3 (A:331-678) Fi 28.8 9.6 0.0007 30.2 1.5 36 120-155 47-84 (348)
5 d1yq2a5 c.1.8.3 (A:313-609) be 26.0 11 0.00082 30.4 1.4 38 119-156 37-74 (297)
6 d2f96a1 c.55.3.5 (A:19-220) Ri 25.2 18 0.0013 26.3 2.4 32 146-177 158-194 (202)
7 d1d0qa_ g.41.3.2 (A:) Zinc-bin 19.6 15 0.0011 26.6 0.9 31 128-158 66-97 (102)
8 d2vzsa5 c.1.8.3 (A:336-674) Ex 19.1 16 0.0012 29.2 1.0 39 119-157 40-78 (339)
9 d2b3ta1 c.66.1.30 (A:2-275) N5 18.7 47 0.0034 27.8 4.0 31 142-177 2-33 (274)
10 d1umna_ a.25.1.1 (A:) Dodecame 17.7 89 0.0065 22.8 5.1 33 103-135 38-70 (151)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.99 E-value=2.5 Score=33.58 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=29.8
Q ss_pred HHHHHHhhhccchhhhhcCCCchHHHHHHHHHhhcCCCC
Q 022273 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (300)
Q Consensus 119 ~IEsRFqfLAADs~svLRG~~vsYReVLldVckkLkV~~ 157 (300)
.++..|..+.+=++|++|-++.-+-+.+++.||++||-+
T Consensus 37 ~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 37 LLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 455666666655689999886667778999999998754
No 2
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=39.07 E-value=5.6 Score=31.85 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=31.2
Q ss_pred HHHHHHHhhhccchhhhhcCCCchHHHHHHHHHhhcCCC
Q 022273 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (300)
Q Consensus 118 ~~IEsRFqfLAADs~svLRG~~vsYReVLldVckkLkV~ 156 (300)
+.++..|+.+..=++|++|-+..-..+-.++.||+++|-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 345677777777779999988666777799999999874
No 3
>d1yq2a2 b.1.4.1 (A:220-312) beta-Galactosidase, domains 2 and 4 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=30.14 E-value=6.1 Score=27.55 Aligned_cols=15 Identities=33% Similarity=0.306 Sum_probs=11.7
Q ss_pred ccccccCCCchhhhh
Q 022273 273 WLPLIWSPEQPCLQQ 287 (300)
Q Consensus 273 ~~~~~~~~~~~~~~~ 287 (300)
--|-.||||+|.|-.
T Consensus 61 ~~~~lWSaE~P~LY~ 75 (93)
T d1yq2a2 61 ENVEPWSAEVPRLYE 75 (93)
T ss_dssp SSCCCBCSSSBCCEE
T ss_pred CCcccCCCCCCeEEE
Confidence 357789999998754
No 4
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=28.82 E-value=9.6 Score=30.19 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=23.9
Q ss_pred HHHHHhhhccchhhhhcCCC--chHHHHHHHHHhhcCC
Q 022273 120 LESRFLFLAADARSTLRGWR--PSYRNVLLAVRKNLNI 155 (300)
Q Consensus 120 IEsRFqfLAADs~svLRG~~--vsYReVLldVckkLkV 155 (300)
++..|+.+-.=++|++|-++ ..--+.+++.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYENNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCCCHHHHHHHHHCCC
Confidence 44455555554589999421 1116888999999997
No 5
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=26.02 E-value=11 Score=30.39 Aligned_cols=38 Identities=8% Similarity=0.037 Sum_probs=30.3
Q ss_pred HHHHHHhhhccchhhhhcCCCchHHHHHHHHHhhcCCC
Q 022273 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (300)
Q Consensus 119 ~IEsRFqfLAADs~svLRG~~vsYReVLldVckkLkV~ 156 (300)
.++.+|+.+-.=++|++|-+....-+-+++.||+|||-
T Consensus 37 ~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gil 74 (297)
T d1yq2a5 37 GAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFW 74 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCE
Confidence 56677777777779999987555667799999999985
No 6
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.16 E-value=18 Score=26.30 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=24.2
Q ss_pred HHHHHhhcCCCCCCC-----CChHHHHHHHHHHHHhh
Q 022273 146 LLAVRKNLNIPCSSK-----LSTEDLEAEIFLHLLQE 177 (300)
Q Consensus 146 LldVckkLkV~~s~k-----lsT~dLEaEIFLhLL~~ 177 (300)
|-.+|++++|.++.. +.-...-++||.+++++
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~ 194 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNR 194 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 566899999987553 34445568999999988
No 7
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=19.65 E-value=15 Score=26.60 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=26.4
Q ss_pred ccchhhhhcCC-CchHHHHHHHHHhhcCCCCC
Q 022273 128 AADARSTLRGW-RPSYRNVLLAVRKNLNIPCS 158 (300)
Q Consensus 128 AADs~svLRG~-~vsYReVLldVckkLkV~~s 158 (300)
++|++++++-. +.+|.+++..++++.+|+..
T Consensus 66 ~Gd~i~fv~~~~~~sf~eAv~~La~~~gi~l~ 97 (102)
T d1d0qa_ 66 GGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLS 97 (102)
T ss_dssp EECHHHHHHHHHTCCHHHHHHHHHHHHTCCCG
T ss_pred cccHHHHHHHHHCcCHHHHHHHHHHHhCCCCC
Confidence 56778888764 99999999999999999864
No 8
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=19.10 E-value=16 Score=29.17 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=29.1
Q ss_pred HHHHHHhhhccchhhhhcCCCchHHHHHHHHHhhcCCCC
Q 022273 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (300)
Q Consensus 119 ~IEsRFqfLAADs~svLRG~~vsYReVLldVckkLkV~~ 157 (300)
.++.+|+.+.+=++|++|=++..--+-.++.||++||-.
T Consensus 40 ~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V 78 (339)
T d2vzsa5 40 AAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLT 78 (339)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeE
Confidence 345566666655699999775555678999999999974
No 9
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=18.73 E-value=47 Score=27.77 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhcCCCCCCCCChHHHHHHHHH-HHHhh
Q 022273 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFL-HLLQE 177 (300)
Q Consensus 142 YReVLldVckkLkV~~s~klsT~dLEaEIFL-hLL~~ 177 (300)
|++.|.+..++|+ ...+..+|+|++| |+|+.
T Consensus 2 ~~~~l~~~~~~l~-----~~~~p~~da~~ll~~~l~~ 33 (274)
T d2b3ta1 2 YQHWLREAISQLQ-----ASESPRRDAEILLEHVTGR 33 (274)
T ss_dssp HHHHHHHHHHTTT-----TSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHhCc
Confidence 8899999999986 2356788988877 77755
No 10
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=17.72 E-value=89 Score=22.78 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=26.8
Q ss_pred hhHHhhhhHHHHHHHHHHHHHHhhhccchhhhh
Q 022273 103 YVMIEQDLEEREDFIASLESRFLFLAADARSTL 135 (300)
Q Consensus 103 y~~i~~~~q~R~~~i~~IEsRFqfLAADs~svL 135 (300)
|...+...++-+.+++.|++|++.+++.....+
T Consensus 38 H~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~ 70 (151)
T d1umna_ 38 HPKMDEYMEEIDGYLDEMSERLITLGGAPFSTL 70 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCH
Confidence 445777788888999999999999999775443
Done!