Query 022277
Match_columns 300
No_of_seqs 280 out of 3160
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 16:48:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 1.1E-29 3.7E-34 225.6 26.0 224 55-279 20-248 (407)
2 3alj_A 2-methyl-3-hydroxypyrid 99.9 1.1E-25 3.9E-30 197.9 25.1 212 57-277 10-230 (379)
3 2x3n_A Probable FAD-dependent 99.9 1.1E-25 3.6E-30 199.4 21.5 214 57-275 5-228 (399)
4 2qa1_A PGAE, polyketide oxygen 99.9 1.4E-24 4.9E-29 197.0 26.1 210 55-275 8-224 (500)
5 2vou_A 2,6-dihydroxypyridine h 99.9 2.4E-24 8.2E-29 190.5 26.1 201 57-267 4-211 (397)
6 2qa2_A CABE, polyketide oxygen 99.9 1.7E-24 5.9E-29 196.5 25.4 208 57-275 11-225 (499)
7 2xdo_A TETX2 protein; tetracyc 99.9 3.8E-24 1.3E-28 189.4 24.2 220 56-278 24-252 (398)
8 3ihg_A RDME; flavoenzyme, anth 99.9 2.7E-24 9.2E-29 197.3 22.7 221 57-278 4-251 (535)
9 3c96_A Flavin-containing monoo 99.9 3.4E-23 1.2E-27 183.9 26.3 206 57-266 3-223 (410)
10 3cgv_A Geranylgeranyl reductas 99.9 3E-23 1E-27 183.2 22.7 217 57-279 3-231 (397)
11 1k0i_A P-hydroxybenzoate hydro 99.9 3E-23 1E-27 183.3 20.5 217 58-278 2-228 (394)
12 3fmw_A Oxygenase; mithramycin, 99.9 4.1E-24 1.4E-28 196.6 15.1 213 57-276 48-269 (570)
13 2r0c_A REBC; flavin adenine di 99.9 9.4E-23 3.2E-27 187.3 24.0 214 57-272 25-260 (549)
14 1pn0_A Phenol 2-monooxygenase; 99.9 7.3E-23 2.5E-27 191.5 22.7 220 57-278 7-296 (665)
15 3oz2_A Digeranylgeranylglycero 99.9 1.2E-22 4E-27 179.1 22.7 219 57-279 3-231 (397)
16 3nix_A Flavoprotein/dehydrogen 99.9 3.1E-22 1E-26 178.3 24.8 218 57-277 4-235 (421)
17 3e1t_A Halogenase; flavoprotei 99.9 4.1E-22 1.4E-26 181.7 25.5 220 57-277 6-238 (512)
18 3i3l_A Alkylhalidase CMLS; fla 99.9 2.4E-22 8.1E-27 185.3 23.7 221 56-277 21-254 (591)
19 2dkh_A 3-hydroxybenzoate hydro 99.9 1.7E-22 5.9E-27 188.5 22.4 219 57-276 31-275 (639)
20 4hb9_A Similarities with proba 99.9 3E-22 1E-26 177.5 22.0 180 59-239 2-192 (412)
21 3atr_A Conserved archaeal prot 99.9 2.8E-22 9.6E-27 180.2 21.3 212 57-278 5-236 (453)
22 2pyx_A Tryptophan halogenase; 99.8 8.1E-19 2.8E-23 160.5 25.8 217 57-276 6-300 (526)
23 2weu_A Tryptophan 5-halogenase 99.8 1.8E-18 6.1E-23 157.8 23.4 216 58-276 2-296 (511)
24 2aqj_A Tryptophan halogenase, 99.8 4.3E-18 1.5E-22 156.1 24.0 217 57-276 4-289 (538)
25 2gmh_A Electron transfer flavo 99.8 1.1E-17 3.8E-22 154.4 26.2 214 57-278 34-295 (584)
26 2e4g_A Tryptophan halogenase; 99.8 7.5E-18 2.6E-22 154.8 22.7 217 57-276 24-319 (550)
27 3c4a_A Probable tryptophan hyd 99.8 1.2E-18 4E-23 153.2 11.7 193 59-275 1-205 (381)
28 2bry_A NEDD9 interacting prote 99.7 1.2E-16 4.1E-21 144.9 12.2 141 56-223 90-239 (497)
29 2gag_B Heterotetrameric sarcos 99.7 1.2E-15 4.2E-20 134.8 17.8 116 155-276 170-288 (405)
30 1yvv_A Amine oxidase, flavin-c 99.7 1.7E-15 5.7E-20 130.6 17.0 149 58-219 2-167 (336)
31 3dme_A Conserved exported prot 99.7 1E-14 3.4E-19 127.1 19.6 69 155-223 146-220 (369)
32 3v76_A Flavoprotein; structura 99.7 1.4E-15 4.8E-20 134.7 14.2 151 56-223 25-207 (417)
33 1rp0_A ARA6, thiazole biosynth 99.6 4.8E-15 1.6E-19 124.8 14.8 135 56-219 37-196 (284)
34 3nyc_A D-arginine dehydrogenas 99.6 6.4E-15 2.2E-19 129.0 16.2 68 154-223 149-219 (381)
35 2i0z_A NAD(FAD)-utilizing dehy 99.6 4.4E-15 1.5E-19 133.0 15.1 162 57-223 25-211 (447)
36 1y56_B Sarcosine oxidase; dehy 99.6 3.9E-15 1.3E-19 130.6 14.3 72 155-227 145-221 (382)
37 3da1_A Glycerol-3-phosphate de 99.6 7.6E-15 2.6E-19 134.9 16.1 69 155-223 166-242 (561)
38 3nlc_A Uncharacterized protein 99.6 8.3E-15 2.8E-19 133.3 16.1 141 58-224 107-291 (549)
39 3ps9_A TRNA 5-methylaminomethy 99.6 1.4E-14 4.8E-19 136.2 18.1 210 57-276 271-530 (676)
40 2oln_A NIKD protein; flavoprot 99.6 2.4E-14 8.1E-19 126.3 18.4 71 155-227 149-222 (397)
41 3jsk_A Cypbp37 protein; octame 99.6 1E-14 3.4E-19 124.4 14.1 132 57-217 78-254 (344)
42 2gf3_A MSOX, monomeric sarcosi 99.6 1.7E-14 5.9E-19 126.7 16.1 211 57-272 2-267 (389)
43 3dje_A Fructosyl amine: oxygen 99.6 1.4E-14 4.6E-19 129.5 15.1 62 154-215 156-222 (438)
44 1ryi_A Glycine oxidase; flavop 99.6 1.1E-14 3.7E-19 127.7 14.1 110 155-273 160-272 (382)
45 3pvc_A TRNA 5-methylaminomethy 99.6 2.7E-14 9.2E-19 134.5 17.6 114 154-276 407-526 (689)
46 2ywl_A Thioredoxin reductase r 99.6 2.5E-14 8.4E-19 112.2 13.2 116 59-223 2-119 (180)
47 2cul_A Glucose-inhibited divis 99.6 1.9E-14 6.4E-19 117.6 12.0 128 57-222 2-133 (232)
48 1qo8_A Flavocytochrome C3 fuma 99.6 2E-14 6.8E-19 132.5 13.0 163 56-220 119-318 (566)
49 2uzz_A N-methyl-L-tryptophan o 99.6 4E-14 1.4E-18 123.7 14.2 59 155-215 145-205 (372)
50 2gqf_A Hypothetical protein HI 99.5 3.6E-14 1.2E-18 125.1 12.8 149 57-223 3-188 (401)
51 3ces_A MNMG, tRNA uridine 5-ca 99.5 6.2E-14 2.1E-18 128.8 14.2 153 57-221 27-188 (651)
52 3axb_A Putative oxidoreductase 99.5 5.1E-14 1.7E-18 126.2 13.5 72 155-227 177-268 (448)
53 2qcu_A Aerobic glycerol-3-phos 99.5 7.1E-13 2.4E-17 120.4 20.5 110 155-272 145-269 (501)
54 2gjc_A Thiazole biosynthetic e 99.5 1.9E-13 6.7E-18 115.9 14.9 136 56-220 63-245 (326)
55 2zxi_A TRNA uridine 5-carboxym 99.5 1.4E-13 4.7E-18 126.0 14.9 149 57-217 26-183 (637)
56 1y0p_A Fumarate reductase flav 99.5 3.3E-14 1.1E-18 131.2 10.8 159 56-216 124-319 (571)
57 3ab1_A Ferredoxin--NADP reduct 99.5 2.5E-14 8.5E-19 124.5 9.1 120 57-217 13-134 (360)
58 3c4n_A Uncharacterized protein 99.5 2.3E-13 7.9E-18 120.3 14.3 166 57-225 35-249 (405)
59 2zbw_A Thioredoxin reductase; 99.5 5.1E-14 1.7E-18 121.2 9.5 122 57-220 4-127 (335)
60 3cp8_A TRNA uridine 5-carboxym 99.5 1.6E-13 5.5E-18 126.0 12.6 148 57-216 20-176 (641)
61 4fk1_A Putative thioredoxin re 99.5 2.6E-13 9E-18 115.3 12.7 113 55-214 3-117 (304)
62 2rgh_A Alpha-glycerophosphate 99.5 2.7E-12 9.2E-17 118.2 20.2 67 156-222 185-259 (571)
63 1pj5_A N,N-dimethylglycine oxi 99.5 5.1E-13 1.8E-17 128.4 15.7 74 154-228 146-222 (830)
64 3lzw_A Ferredoxin--NADP reduct 99.5 6E-14 2.1E-18 120.4 7.9 116 57-214 6-123 (332)
65 4a9w_A Monooxygenase; baeyer-v 99.5 1.2E-13 4.2E-18 119.6 9.9 128 58-215 3-133 (357)
66 3gwf_A Cyclohexanone monooxyge 99.5 7.2E-13 2.5E-17 121.1 14.2 133 57-215 7-148 (540)
67 4dgk_A Phytoene dehydrogenase; 99.4 4.7E-12 1.6E-16 114.9 18.8 61 160-220 222-284 (501)
68 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 1.1E-12 3.6E-17 113.4 12.6 138 59-212 2-163 (342)
69 3fbs_A Oxidoreductase; structu 99.4 9.1E-13 3.1E-17 111.2 11.8 110 58-216 2-114 (297)
70 3ihm_A Styrene monooxygenase A 99.4 2.4E-12 8.2E-17 114.7 15.0 142 57-218 21-171 (430)
71 3i6d_A Protoporphyrinogen oxid 99.4 1.5E-12 5.2E-17 117.1 13.3 55 160-215 236-290 (470)
72 4ap3_A Steroid monooxygenase; 99.4 1.2E-12 4.2E-17 119.8 12.3 133 57-215 20-160 (549)
73 2gv8_A Monooxygenase; FMO, FAD 99.4 1.7E-12 5.7E-17 116.3 12.2 150 57-215 5-178 (447)
74 3uox_A Otemo; baeyer-villiger 99.4 2E-12 6.9E-17 118.3 12.2 133 57-215 8-148 (545)
75 3f8d_A Thioredoxin reductase ( 99.4 2.4E-12 8.3E-17 109.8 11.9 111 57-215 14-126 (323)
76 1w4x_A Phenylacetone monooxyge 99.4 1.2E-12 4E-17 120.0 9.9 134 57-216 15-156 (542)
77 4at0_A 3-ketosteroid-delta4-5a 99.4 5.3E-13 1.8E-17 121.4 7.1 56 160-215 203-265 (510)
78 2q0l_A TRXR, thioredoxin reduc 99.4 3.1E-12 1.1E-16 108.8 11.3 112 59-216 2-116 (311)
79 3ka7_A Oxidoreductase; structu 99.4 8.2E-12 2.8E-16 110.9 13.5 56 160-216 197-254 (425)
80 3itj_A Thioredoxin reductase 1 99.4 4E-12 1.4E-16 109.3 11.1 117 56-215 20-143 (338)
81 1d4d_A Flavocytochrome C fumar 99.3 9.8E-13 3.3E-17 121.2 7.0 161 57-217 125-320 (572)
82 2q7v_A Thioredoxin reductase; 99.3 6.3E-12 2.2E-16 107.7 11.5 114 57-215 7-124 (325)
83 2xve_A Flavin-containing monoo 99.3 7.7E-12 2.6E-16 112.4 12.4 149 59-216 3-168 (464)
84 1vdc_A NTR, NADPH dependent th 99.3 2.8E-12 9.6E-17 110.2 8.9 114 57-216 7-126 (333)
85 2ivd_A PPO, PPOX, protoporphyr 99.3 1.2E-11 4E-16 111.7 13.0 63 57-119 15-92 (478)
86 1kf6_A Fumarate reductase flav 99.3 2.3E-11 7.9E-16 112.5 14.3 163 57-220 4-203 (602)
87 2wdq_A Succinate dehydrogenase 99.3 2.1E-11 7.3E-16 112.5 13.7 159 57-216 6-208 (588)
88 3d1c_A Flavin-containing putat 99.3 1.7E-11 5.9E-16 106.7 12.5 135 57-215 3-144 (369)
89 3k7m_X 6-hydroxy-L-nicotine ox 99.3 1.4E-12 4.7E-17 116.2 5.0 51 160-213 208-258 (431)
90 1fl2_A Alkyl hydroperoxide red 99.3 1.8E-11 6E-16 104.1 11.4 112 58-215 1-116 (310)
91 3cty_A Thioredoxin reductase; 99.3 1.7E-11 5.9E-16 104.6 11.3 111 57-215 15-127 (319)
92 2a87_A TRXR, TR, thioredoxin r 99.3 1.1E-11 3.8E-16 106.6 10.2 112 57-215 13-127 (335)
93 3nks_A Protoporphyrinogen oxid 99.3 1.1E-11 3.9E-16 111.7 10.6 53 161-214 236-290 (477)
94 1c0p_A D-amino acid oxidase; a 99.3 2E-11 6.8E-16 106.2 11.6 35 57-91 5-39 (363)
95 3nrn_A Uncharacterized protein 99.3 1.6E-11 5.4E-16 109.0 11.1 58 160-221 190-249 (421)
96 1chu_A Protein (L-aspartate ox 99.3 2.2E-11 7.7E-16 111.3 12.3 36 57-93 7-42 (540)
97 2h88_A Succinate dehydrogenase 99.3 4.9E-11 1.7E-15 110.4 14.4 159 57-216 17-219 (621)
98 2e5v_A L-aspartate oxidase; ar 99.3 2.8E-11 9.6E-16 108.9 12.4 61 158-219 118-181 (472)
99 1trb_A Thioredoxin reductase; 99.3 1.7E-11 5.9E-16 104.6 10.5 112 57-215 4-117 (320)
100 4gcm_A TRXR, thioredoxin reduc 99.3 3.9E-11 1.3E-15 102.1 12.6 36 56-91 4-39 (312)
101 3lov_A Protoporphyrinogen oxid 99.3 5.2E-11 1.8E-15 107.4 13.8 54 160-215 237-290 (475)
102 1s3e_A Amine oxidase [flavin-c 99.3 8.3E-11 2.9E-15 107.3 14.9 53 160-214 216-268 (520)
103 1rsg_A FMS1 protein; FAD bindi 99.3 3.4E-11 1.2E-15 109.7 12.0 57 158-214 201-257 (516)
104 4gde_A UDP-galactopyranose mut 99.3 2.9E-11 9.8E-16 110.0 11.3 51 159-212 222-274 (513)
105 4a5l_A Thioredoxin reductase; 99.2 5.5E-11 1.9E-15 101.1 12.0 115 57-214 3-121 (314)
106 2vvm_A Monoamine oxidase N; FA 99.2 7.6E-11 2.6E-15 106.9 13.2 55 160-215 256-313 (495)
107 2bs2_A Quinol-fumarate reducta 99.2 1.1E-10 3.8E-15 108.8 14.1 57 160-216 159-222 (660)
108 1hyu_A AHPF, alkyl hydroperoxi 99.2 5.4E-11 1.8E-15 108.4 11.2 114 56-215 210-327 (521)
109 3s5w_A L-ornithine 5-monooxyge 99.2 6.4E-11 2.2E-15 106.5 11.3 146 57-215 29-193 (463)
110 1jnr_A Adenylylsulfate reducta 99.2 1.4E-10 4.7E-15 108.3 12.3 152 57-216 21-220 (643)
111 3r9u_A Thioredoxin reductase; 99.2 2.8E-10 9.5E-15 96.7 12.5 110 57-214 3-118 (315)
112 1q1r_A Putidaredoxin reductase 99.2 1.1E-10 3.9E-15 103.8 9.8 112 57-216 3-116 (431)
113 3klj_A NAD(FAD)-dependent dehy 99.1 2.2E-10 7.4E-15 100.4 11.4 109 57-214 8-116 (385)
114 2yg5_A Putrescine oxidase; oxi 99.1 1E-09 3.4E-14 98.3 15.6 38 57-94 4-41 (453)
115 3lxd_A FAD-dependent pyridine 99.1 1.7E-09 5.7E-14 95.8 15.9 101 58-215 152-252 (415)
116 2v3a_A Rubredoxin reductase; a 99.1 4.8E-10 1.7E-14 98.3 12.1 108 57-222 144-253 (384)
117 2bcg_G Secretory pathway GDP d 99.1 8.8E-10 3E-14 98.7 14.0 55 160-215 243-301 (453)
118 3gyx_A Adenylylsulfate reducta 99.1 2E-10 6.9E-15 107.0 10.0 37 57-93 21-63 (662)
119 2jae_A L-amino acid oxidase; o 99.1 6.4E-10 2.2E-14 100.6 12.9 54 159-213 239-295 (489)
120 2b9w_A Putative aminooxidase; 99.1 2E-09 7E-14 95.4 15.5 38 57-94 5-43 (424)
121 3p1w_A Rabgdi protein; GDI RAB 99.1 1.5E-09 5.2E-14 96.9 14.6 54 160-213 257-313 (475)
122 3kd9_A Coenzyme A disulfide re 99.1 1.2E-10 4E-15 104.3 7.5 110 57-214 2-114 (449)
123 2yqu_A 2-oxoglutarate dehydrog 99.1 8E-10 2.7E-14 99.1 12.6 101 57-216 166-266 (455)
124 3fg2_P Putative rubredoxin red 99.1 2.1E-09 7.3E-14 94.8 15.1 109 57-222 141-251 (404)
125 2gqw_A Ferredoxin reductase; f 99.1 4.2E-10 1.4E-14 99.5 10.6 108 57-216 6-115 (408)
126 3ef6_A Toluene 1,2-dioxygenase 99.1 6.7E-10 2.3E-14 98.2 11.8 107 59-214 3-111 (410)
127 3lxd_A FAD-dependent pyridine 99.1 5.5E-10 1.9E-14 98.9 11.0 110 57-214 8-119 (415)
128 1ges_A Glutathione reductase; 99.1 8.2E-10 2.8E-14 98.9 12.0 102 57-216 166-267 (450)
129 3sx6_A Sulfide-quinone reducta 99.1 7.1E-10 2.4E-14 98.9 11.5 109 58-217 4-115 (437)
130 3oc4_A Oxidoreductase, pyridin 99.1 6.6E-10 2.3E-14 99.5 10.7 112 59-216 3-117 (452)
131 4gut_A Lysine-specific histone 99.1 1.5E-09 5.3E-14 102.7 13.6 49 160-212 535-583 (776)
132 1dxl_A Dihydrolipoamide dehydr 99.1 7.9E-10 2.7E-14 99.5 11.1 37 57-93 5-41 (470)
133 3iwa_A FAD-dependent pyridine 99.0 5.1E-10 1.7E-14 100.8 9.1 118 58-214 3-125 (472)
134 3g3e_A D-amino-acid oxidase; F 99.0 5.2E-11 1.8E-15 103.1 2.4 34 59-92 1-40 (351)
135 3kkj_A Amine oxidase, flavin-c 99.0 1.9E-10 6.6E-15 95.4 5.7 37 58-94 2-38 (336)
136 3h8l_A NADH oxidase; membrane 99.0 2.5E-10 8.4E-15 101.0 6.6 106 59-215 2-114 (409)
137 3hyw_A Sulfide-quinone reducta 99.0 1.1E-10 3.9E-15 103.9 4.1 104 59-213 3-108 (430)
138 1v59_A Dihydrolipoamide dehydr 99.0 3.7E-10 1.3E-14 101.9 7.4 37 57-93 4-40 (478)
139 3ics_A Coenzyme A-disulfide re 99.0 1.3E-09 4.6E-14 100.8 11.1 114 56-214 34-152 (588)
140 1q1r_A Putidaredoxin reductase 99.0 3.5E-09 1.2E-13 94.2 13.4 109 57-222 148-260 (431)
141 1ojt_A Surface protein; redox- 99.0 2.2E-10 7.7E-15 103.4 5.6 37 57-93 5-41 (482)
142 3fg2_P Putative rubredoxin red 99.0 3.7E-09 1.2E-13 93.3 13.0 107 59-214 2-110 (404)
143 3ef6_A Toluene 1,2-dioxygenase 99.0 1.9E-09 6.7E-14 95.2 11.2 108 57-222 142-251 (410)
144 2r9z_A Glutathione amide reduc 99.0 2.7E-09 9.1E-14 95.9 12.2 100 57-215 165-265 (463)
145 2eq6_A Pyruvate dehydrogenase 99.0 2.5E-09 8.6E-14 96.1 11.8 100 58-216 169-273 (464)
146 1onf_A GR, grase, glutathione 99.0 3.3E-09 1.1E-13 96.2 12.5 101 58-216 176-277 (500)
147 1sez_A Protoporphyrinogen oxid 99.0 1.2E-08 4.2E-13 92.5 16.3 62 57-118 12-88 (504)
148 2a8x_A Dihydrolipoyl dehydroge 99.0 5.7E-10 1.9E-14 100.3 7.3 142 58-217 3-149 (464)
149 3cgb_A Pyridine nucleotide-dis 99.0 7.5E-10 2.6E-14 99.9 7.9 114 58-216 36-154 (480)
150 3h28_A Sulfide-quinone reducta 99.0 1.3E-09 4.4E-14 97.0 9.3 106 58-214 2-109 (430)
151 3ntd_A FAD-dependent pyridine 99.0 2.1E-09 7E-14 99.1 10.8 111 59-214 2-117 (565)
152 2bc0_A NADH oxidase; flavoprot 99.0 8.5E-10 2.9E-14 99.8 8.1 113 57-215 34-150 (490)
153 1xhc_A NADH oxidase /nitrite r 99.0 3.3E-09 1.1E-13 92.3 11.2 106 58-214 8-113 (367)
154 3l8k_A Dihydrolipoyl dehydroge 99.0 1.7E-09 5.7E-14 97.3 9.5 36 58-93 4-39 (466)
155 1fec_A Trypanothione reductase 99.0 3.6E-09 1.2E-13 95.7 11.7 101 57-215 186-289 (490)
156 2hqm_A GR, grase, glutathione 99.0 4.8E-09 1.6E-13 94.6 12.5 101 57-215 184-286 (479)
157 2wpf_A Trypanothione reductase 99.0 5.3E-09 1.8E-13 94.7 12.7 101 57-215 190-293 (495)
158 1y56_A Hypothetical protein PH 99.0 9.9E-10 3.4E-14 99.4 7.4 111 57-215 107-220 (493)
159 2cdu_A NADPH oxidase; flavoenz 98.9 8.6E-09 2.9E-13 92.3 13.3 101 57-215 148-248 (452)
160 3urh_A Dihydrolipoyl dehydroge 98.9 2.5E-09 8.6E-14 96.8 9.7 37 57-93 24-60 (491)
161 1ebd_A E3BD, dihydrolipoamide 98.9 1.3E-09 4.5E-14 97.7 7.3 33 58-90 3-35 (455)
162 1ebd_A E3BD, dihydrolipoamide 98.9 5E-09 1.7E-13 93.9 11.0 100 57-215 169-271 (455)
163 2gqw_A Ferredoxin reductase; f 98.9 1E-08 3.4E-13 90.6 12.8 104 57-222 144-249 (408)
164 3oc4_A Oxidoreductase, pyridin 98.9 1.8E-08 6E-13 90.2 14.6 100 57-215 146-245 (452)
165 1zmd_A Dihydrolipoyl dehydroge 98.9 2.8E-09 9.6E-14 96.0 9.2 37 57-93 5-41 (474)
166 2qae_A Lipoamide, dihydrolipoy 98.9 3.3E-09 1.1E-13 95.4 9.7 36 58-93 2-37 (468)
167 2cdu_A NADPH oxidase; flavoenz 98.9 1.9E-09 6.6E-14 96.5 8.0 112 59-215 1-118 (452)
168 1nhp_A NADH peroxidase; oxidor 98.9 5.9E-09 2E-13 93.2 11.1 100 57-215 148-247 (447)
169 3vrd_B FCCB subunit, flavocyto 98.9 9.3E-09 3.2E-13 90.5 11.8 105 59-215 3-109 (401)
170 1xdi_A RV3303C-LPDA; reductase 98.9 1.1E-08 3.7E-13 92.8 12.3 101 57-216 181-281 (499)
171 4b1b_A TRXR, thioredoxin reduc 98.9 1.3E-08 4.4E-13 92.8 12.8 100 56-215 221-320 (542)
172 1v59_A Dihydrolipoamide dehydr 98.9 7.4E-09 2.5E-13 93.4 11.1 101 57-216 182-289 (478)
173 4eqs_A Coenzyme A disulfide re 98.9 1.5E-08 5E-13 90.3 12.8 115 33-214 126-240 (437)
174 1zk7_A HGII, reductase, mercur 98.9 1.2E-08 4.2E-13 91.6 12.3 34 57-90 3-36 (467)
175 1mo9_A ORF3; nucleotide bindin 98.9 9.5E-09 3.3E-13 93.7 11.6 99 59-215 215-317 (523)
176 2bc0_A NADH oxidase; flavoprot 98.9 1.5E-08 5.2E-13 91.6 12.9 99 57-214 193-291 (490)
177 1ojt_A Surface protein; redox- 98.9 7.5E-09 2.6E-13 93.4 10.8 100 57-215 184-287 (482)
178 3qfa_A Thioredoxin reductase 1 98.9 8.2E-09 2.8E-13 94.0 11.0 36 56-91 30-65 (519)
179 1m6i_A Programmed cell death p 98.9 2.3E-09 7.7E-14 97.1 7.1 132 57-214 10-144 (493)
180 2yqu_A 2-oxoglutarate dehydrog 98.9 1.2E-09 4.1E-14 98.0 5.1 35 59-93 2-36 (455)
181 1nhp_A NADH peroxidase; oxidor 98.9 6.7E-09 2.3E-13 92.8 9.9 111 59-215 1-116 (447)
182 2a8x_A Dihydrolipoyl dehydroge 98.9 1.9E-08 6.5E-13 90.3 12.6 100 57-215 170-272 (464)
183 3o0h_A Glutathione reductase; 98.9 1.5E-08 5.2E-13 91.5 12.0 100 57-215 190-289 (484)
184 3iwa_A FAD-dependent pyridine 98.9 1.6E-08 5.5E-13 91.0 12.1 109 57-223 158-269 (472)
185 1zmd_A Dihydrolipoyl dehydroge 98.9 1.7E-08 5.9E-13 90.9 12.1 102 57-215 177-283 (474)
186 4eqs_A Coenzyme A disulfide re 98.9 1.1E-08 3.7E-13 91.2 10.6 111 59-214 1-116 (437)
187 2v3a_A Rubredoxin reductase; a 98.9 1.2E-08 4E-13 89.4 10.5 110 57-215 3-114 (384)
188 2qae_A Lipoamide, dihydrolipoy 98.9 1.7E-08 5.9E-13 90.7 11.8 100 57-215 173-277 (468)
189 4dna_A Probable glutathione re 98.8 1.6E-08 5.4E-13 90.8 11.4 100 57-215 169-269 (463)
190 1m6i_A Programmed cell death p 98.8 3.2E-08 1.1E-12 89.6 13.2 107 58-222 180-292 (493)
191 1xhc_A NADH oxidase /nitrite r 98.8 1.1E-08 3.7E-13 89.1 9.6 99 59-222 144-244 (367)
192 3ntd_A FAD-dependent pyridine 98.8 3.3E-08 1.1E-12 91.0 13.4 100 57-215 150-268 (565)
193 3o0h_A Glutathione reductase; 98.8 5.4E-09 1.8E-13 94.4 7.9 34 57-90 25-58 (484)
194 3lad_A Dihydrolipoamide dehydr 98.8 4.3E-09 1.5E-13 94.9 7.1 37 57-93 2-38 (476)
195 1lvl_A Dihydrolipoamide dehydr 98.8 1.6E-08 5.5E-13 90.6 10.6 98 57-215 170-269 (458)
196 4b63_A L-ornithine N5 monooxyg 98.8 9.7E-09 3.3E-13 93.1 9.1 61 156-216 142-216 (501)
197 1b37_A Protein (polyamine oxid 98.8 1.4E-07 4.7E-12 84.9 16.5 56 159-215 206-271 (472)
198 3dgz_A Thioredoxin reductase 2 98.8 2.5E-08 8.7E-13 90.1 11.7 34 57-90 5-38 (488)
199 1trb_A Thioredoxin reductase; 98.8 3.1E-08 1.1E-12 84.2 11.3 99 57-215 144-248 (320)
200 1xdi_A RV3303C-LPDA; reductase 98.8 2.1E-08 7.3E-13 90.8 10.6 34 58-91 2-38 (499)
201 1zk7_A HGII, reductase, mercur 98.8 3.4E-08 1.2E-12 88.7 11.7 98 57-215 175-272 (467)
202 1dxl_A Dihydrolipoamide dehydr 98.8 2.3E-08 7.7E-13 90.0 10.4 100 57-215 176-280 (470)
203 1mo9_A ORF3; nucleotide bindin 98.8 4.2E-08 1.4E-12 89.4 12.2 38 56-93 41-78 (523)
204 3ics_A Coenzyme A-disulfide re 98.8 2.9E-08 9.9E-13 91.8 11.1 97 57-214 186-282 (588)
205 3lad_A Dihydrolipoamide dehydr 98.8 6E-08 2E-12 87.4 12.8 100 57-215 179-281 (476)
206 4g6h_A Rotenone-insensitive NA 98.8 1.1E-08 3.7E-13 92.7 7.9 36 57-92 41-76 (502)
207 3dgh_A TRXR-1, thioredoxin red 98.8 3.4E-08 1.2E-12 89.1 11.1 34 57-90 8-41 (483)
208 3urh_A Dihydrolipoyl dehydroge 98.8 4.4E-08 1.5E-12 88.6 11.9 100 57-215 197-301 (491)
209 3ic9_A Dihydrolipoamide dehydr 98.8 6E-08 2.1E-12 87.7 12.7 99 57-215 173-275 (492)
210 2eq6_A Pyruvate dehydrogenase 98.8 1.6E-08 5.6E-13 90.8 8.7 34 58-91 6-39 (464)
211 1lvl_A Dihydrolipoamide dehydr 98.8 5E-08 1.7E-12 87.5 11.6 34 57-90 4-37 (458)
212 4dna_A Probable glutathione re 98.8 1.8E-08 6E-13 90.5 8.6 33 57-89 4-36 (463)
213 3cgb_A Pyridine nucleotide-dis 98.8 4.8E-08 1.7E-12 88.1 11.5 98 57-214 185-282 (480)
214 2hqm_A GR, grase, glutathione 98.8 2.7E-08 9.2E-13 89.7 9.7 35 57-91 10-44 (479)
215 2vdc_G Glutamate synthase [NAD 98.8 7.4E-09 2.5E-13 92.6 5.9 37 57-93 121-157 (456)
216 3itj_A Thioredoxin reductase 1 98.8 5E-08 1.7E-12 83.5 10.9 95 57-214 172-271 (338)
217 2gag_A Heterotetrameric sarcos 98.7 2.7E-08 9.4E-13 96.8 10.1 36 58-93 128-163 (965)
218 3dk9_A Grase, GR, glutathione 98.7 7.4E-08 2.5E-12 86.8 12.1 101 57-215 186-294 (478)
219 3dk9_A Grase, GR, glutathione 98.7 1.8E-08 6.1E-13 90.9 8.0 35 57-91 19-53 (478)
220 2q0l_A TRXR, thioredoxin reduc 98.7 9.6E-08 3.3E-12 80.9 12.0 95 57-214 142-241 (311)
221 3fpz_A Thiazole biosynthetic e 98.7 8.8E-09 3E-13 88.2 5.5 41 54-94 61-103 (326)
222 3ic9_A Dihydrolipoamide dehydr 98.7 2.2E-09 7.4E-14 97.2 1.3 35 57-91 7-41 (492)
223 3g5s_A Methylenetetrahydrofola 98.7 5.4E-08 1.8E-12 83.8 9.8 34 59-92 2-35 (443)
224 3dgh_A TRXR-1, thioredoxin red 98.7 1.1E-07 3.6E-12 85.9 12.2 99 57-214 186-289 (483)
225 3cty_A Thioredoxin reductase; 98.7 1.2E-07 4E-12 80.7 11.2 94 57-214 154-252 (319)
226 1fl2_A Alkyl hydroperoxide red 98.7 1.7E-07 5.8E-12 79.3 11.7 95 57-214 143-242 (310)
227 2r9z_A Glutathione amide reduc 98.7 5.4E-08 1.8E-12 87.3 9.0 35 57-91 3-37 (463)
228 1onf_A GR, grase, glutathione 98.7 4.4E-08 1.5E-12 88.8 8.5 34 58-91 2-35 (500)
229 2zbw_A Thioredoxin reductase; 98.7 1.2E-07 4E-12 81.2 10.6 97 58-215 152-253 (335)
230 3r9u_A Thioredoxin reductase; 98.7 1.9E-07 6.4E-12 79.0 11.6 95 57-214 146-244 (315)
231 1fec_A Trypanothione reductase 98.7 8.6E-08 2.9E-12 86.6 9.9 33 57-89 2-35 (490)
232 3dgz_A Thioredoxin reductase 2 98.7 2.1E-07 7.2E-12 84.1 12.4 99 57-214 184-287 (488)
233 1ges_A Glutathione reductase; 98.6 7.3E-08 2.5E-12 86.2 8.9 35 57-91 3-37 (450)
234 1vdc_A NTR, NADPH dependent th 98.6 2.3E-07 7.9E-12 79.3 11.7 96 57-215 158-260 (333)
235 3k30_A Histamine dehydrogenase 98.6 2.4E-08 8.1E-13 94.0 5.8 38 56-93 389-426 (690)
236 2q7v_A Thioredoxin reductase; 98.6 2.3E-07 7.7E-12 79.1 11.5 94 57-214 151-249 (325)
237 3ab1_A Ferredoxin--NADP reduct 98.6 7.1E-08 2.4E-12 83.5 8.4 97 58-214 163-263 (360)
238 3l8k_A Dihydrolipoyl dehydroge 98.6 2.4E-07 8.3E-12 83.2 12.1 98 57-215 171-273 (466)
239 3d1c_A Flavin-containing putat 98.6 2.2E-07 7.5E-12 80.6 11.1 106 58-215 166-273 (369)
240 3f8d_A Thioredoxin reductase ( 98.6 3.2E-07 1.1E-11 77.8 11.8 103 57-223 153-262 (323)
241 1lqt_A FPRA; NADP+ derivative, 98.6 9.4E-09 3.2E-13 92.0 2.1 37 57-93 2-45 (456)
242 2wpf_A Trypanothione reductase 98.6 5.5E-08 1.9E-12 88.0 6.8 33 57-89 6-39 (495)
243 3s5w_A L-ornithine 5-monooxyge 98.6 4.2E-07 1.4E-11 81.5 12.0 135 57-215 226-378 (463)
244 3klj_A NAD(FAD)-dependent dehy 98.6 4.3E-08 1.5E-12 85.8 4.7 36 58-93 146-181 (385)
245 1gte_A Dihydropyrimidine dehyd 98.6 1.8E-08 6E-13 98.8 2.4 36 58-93 187-223 (1025)
246 3kd9_A Coenzyme A disulfide re 98.5 6.4E-07 2.2E-11 80.0 11.8 105 57-222 147-254 (449)
247 2e1m_A L-glutamate oxidase; L- 98.5 9E-08 3.1E-12 83.0 6.0 38 56-93 42-80 (376)
248 1ps9_A 2,4-dienoyl-COA reducta 98.5 9.9E-08 3.4E-12 89.6 6.6 37 57-93 372-408 (671)
249 2x8g_A Thioredoxin glutathione 98.5 9.3E-07 3.2E-11 81.9 12.9 35 56-90 105-139 (598)
250 1cjc_A Protein (adrenodoxin re 98.5 3.9E-08 1.3E-12 88.1 3.5 37 57-93 5-43 (460)
251 1v0j_A UDP-galactopyranose mut 98.5 1.1E-07 3.6E-12 83.8 6.1 38 57-94 6-44 (399)
252 1o94_A Tmadh, trimethylamine d 98.5 2.9E-08 9.9E-13 94.0 2.6 38 56-93 387-424 (729)
253 2a87_A TRXR, TR, thioredoxin r 98.5 4.4E-07 1.5E-11 77.7 8.7 94 57-214 154-252 (335)
254 4g6h_A Rotenone-insensitive NA 98.5 4.3E-07 1.5E-11 82.2 9.0 96 59-213 218-331 (502)
255 3qvp_A Glucose oxidase; oxidor 98.5 1.1E-06 3.7E-11 80.7 11.7 35 57-91 18-53 (583)
256 3lzw_A Ferredoxin--NADP reduct 98.5 5.3E-07 1.8E-11 76.8 9.1 92 58-214 154-250 (332)
257 4b1b_A TRXR, thioredoxin reduc 98.5 5.9E-07 2E-11 81.8 9.6 35 58-92 42-76 (542)
258 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.1E-06 3.9E-11 79.9 11.3 95 57-214 354-453 (521)
259 2x8g_A Thioredoxin glutathione 98.4 1.8E-06 6.2E-11 80.0 12.5 99 58-215 286-396 (598)
260 3qfa_A Thioredoxin reductase 1 98.4 2.5E-06 8.7E-11 77.5 12.8 99 57-214 209-315 (519)
261 3hdq_A UDP-galactopyranose mut 98.4 2.7E-07 9.2E-12 80.7 5.7 39 56-94 27-65 (397)
262 2iid_A L-amino-acid oxidase; f 98.4 1.1E-06 3.8E-11 79.5 9.2 39 56-94 31-69 (498)
263 3k30_A Histamine dehydrogenase 98.4 6E-07 2E-11 84.5 7.4 98 57-214 522-624 (690)
264 4a5l_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 71.3 10.9 37 57-93 151-187 (314)
265 4dsg_A UDP-galactopyranose mut 98.3 5.6E-07 1.9E-11 81.2 6.1 55 158-215 215-271 (484)
266 1i8t_A UDP-galactopyranose mut 98.3 4.8E-07 1.6E-11 78.6 5.4 36 59-94 2-37 (367)
267 3fbs_A Oxidoreductase; structu 98.3 2.7E-06 9.2E-11 71.2 9.4 87 57-214 140-226 (297)
268 3gwf_A Cyclohexanone monooxyge 98.3 2.1E-06 7.2E-11 78.4 9.3 36 57-92 177-212 (540)
269 2bi7_A UDP-galactopyranose mut 98.3 7.2E-07 2.5E-11 78.0 5.9 37 58-94 3-39 (384)
270 2gag_A Heterotetrameric sarcos 98.3 2.7E-06 9.1E-11 82.9 9.9 90 58-214 284-383 (965)
271 1d5t_A Guanine nucleotide diss 98.3 1.3E-06 4.6E-11 77.5 6.8 55 160-215 235-291 (433)
272 3uox_A Otemo; baeyer-villiger 98.2 1.7E-06 5.7E-11 79.1 6.2 37 57-93 184-220 (545)
273 2xve_A Flavin-containing monoo 98.2 1.1E-05 3.8E-10 72.3 11.2 37 57-93 196-232 (464)
274 2gv8_A Monooxygenase; FMO, FAD 98.2 6E-06 2.1E-10 73.6 8.8 36 57-92 211-247 (447)
275 3pl8_A Pyranose 2-oxidase; sub 98.1 2E-06 7E-11 79.8 5.1 38 57-94 45-82 (623)
276 1gte_A Dihydropyrimidine dehyd 98.1 2.3E-05 7.8E-10 76.9 12.6 34 58-91 332-366 (1025)
277 4ap3_A Steroid monooxygenase; 98.1 5.6E-06 1.9E-10 75.7 6.8 36 57-92 190-225 (549)
278 1o94_A Tmadh, trimethylamine d 98.1 5.5E-06 1.9E-10 78.4 6.9 35 57-91 527-563 (729)
279 2vdc_G Glutamate synthase [NAD 98.1 1.1E-05 3.8E-10 72.0 8.6 37 57-93 263-300 (456)
280 2z3y_A Lysine-specific histone 98.1 4.3E-06 1.5E-10 78.3 6.1 38 57-94 106-143 (662)
281 4gcm_A TRXR, thioredoxin reduc 98.0 4.1E-05 1.4E-09 64.6 11.6 36 58-93 145-180 (312)
282 2xag_A Lysine-specific histone 98.0 4.8E-06 1.6E-10 79.6 6.2 38 57-94 277-314 (852)
283 1ps9_A 2,4-dienoyl-COA reducta 98.0 2.6E-05 9E-10 73.1 10.8 48 161-214 579-628 (671)
284 1kdg_A CDH, cellobiose dehydro 98.0 4.5E-06 1.5E-10 76.4 5.1 36 57-92 6-41 (546)
285 3t37_A Probable dehydrogenase; 98.0 4E-06 1.4E-10 76.4 4.3 36 57-92 16-52 (526)
286 1cjc_A Protein (adrenodoxin re 98.0 4.7E-05 1.6E-09 68.0 10.8 36 58-93 145-201 (460)
287 3q9t_A Choline dehydrogenase a 97.8 1.2E-05 4E-10 73.9 4.4 36 57-92 5-41 (577)
288 1lqt_A FPRA; NADP+ derivative, 97.8 6.8E-05 2.3E-09 66.9 9.3 37 57-93 146-203 (456)
289 1ju2_A HydroxynitrIle lyase; f 97.8 8.5E-06 2.9E-10 74.3 3.5 36 57-93 25-60 (536)
290 3ayj_A Pro-enzyme of L-phenyla 97.8 9.3E-06 3.2E-10 75.8 3.4 36 58-93 56-100 (721)
291 4fk1_A Putative thioredoxin re 97.8 0.00011 3.9E-09 61.7 9.8 100 57-223 145-247 (304)
292 1n4w_A CHOD, cholesterol oxida 97.7 2.8E-05 9.4E-10 70.4 5.1 36 57-92 4-39 (504)
293 3h8l_A NADH oxidase; membrane 97.7 0.00014 4.8E-09 63.9 9.5 39 171-214 232-270 (409)
294 4a9w_A Monooxygenase; baeyer-v 97.7 4.9E-05 1.7E-09 65.1 6.0 34 57-91 162-195 (357)
295 1coy_A Cholesterol oxidase; ox 97.7 3.8E-05 1.3E-09 69.5 5.1 36 57-92 10-45 (507)
296 3fim_B ARYL-alcohol oxidase; A 97.6 2.1E-05 7.1E-10 72.0 2.9 36 58-93 2-38 (566)
297 1gpe_A Protein (glucose oxidas 97.6 5.1E-05 1.7E-09 70.0 5.5 37 57-93 23-60 (587)
298 1vg0_A RAB proteins geranylger 97.6 0.00012 4.2E-09 67.5 7.7 56 57-113 7-62 (650)
299 2jbv_A Choline oxidase; alcoho 97.6 4.5E-05 1.6E-09 69.7 4.4 37 57-93 12-49 (546)
300 3sx6_A Sulfide-quinone reducta 97.5 0.00025 8.7E-09 62.8 8.2 48 160-212 213-267 (437)
301 3h28_A Sulfide-quinone reducta 97.5 0.00025 8.7E-09 62.7 7.8 47 160-213 205-255 (430)
302 1w4x_A Phenylacetone monooxyge 97.4 0.00067 2.3E-08 61.9 10.0 37 57-93 185-221 (542)
303 3fwz_A Inner membrane protein 97.3 0.00032 1.1E-08 51.8 5.1 36 57-92 6-41 (140)
304 2g1u_A Hypothetical protein TM 97.2 0.00046 1.6E-08 51.8 5.2 36 57-92 18-53 (155)
305 4b63_A L-ornithine N5 monooxyg 97.1 0.002 6.7E-08 58.2 9.5 37 57-93 245-283 (501)
306 3llv_A Exopolyphosphatase-rela 97.1 0.00059 2E-08 50.3 4.8 35 58-92 6-40 (141)
307 1id1_A Putative potassium chan 97.0 0.00095 3.2E-08 49.9 5.7 35 57-91 2-36 (153)
308 1lss_A TRK system potassium up 97.0 0.00095 3.3E-08 48.8 4.9 33 59-91 5-37 (140)
309 3vrd_B FCCB subunit, flavocyto 96.9 0.01 3.4E-07 51.7 11.5 43 171-214 216-258 (401)
310 3ic5_A Putative saccharopine d 96.8 0.0012 4.2E-08 46.6 4.5 34 58-91 5-39 (118)
311 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0026 8.8E-08 46.6 4.9 34 58-91 6-39 (144)
312 3c85_A Putative glutathione-re 96.6 0.0022 7.5E-08 49.5 4.6 35 58-92 39-74 (183)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 96.6 0.0026 8.8E-08 53.4 5.2 35 58-92 15-49 (302)
314 3ado_A Lambda-crystallin; L-gu 96.5 0.0021 7.1E-08 54.2 4.5 36 57-92 5-40 (319)
315 1y56_A Hypothetical protein PH 96.5 0.0081 2.8E-07 54.0 8.4 52 171-223 271-324 (493)
316 3hyw_A Sulfide-quinone reducta 96.5 0.027 9.3E-07 49.6 11.6 48 161-213 206-255 (430)
317 3l4b_C TRKA K+ channel protien 96.4 0.0027 9.2E-08 50.5 4.1 33 60-92 2-34 (218)
318 2dpo_A L-gulonate 3-dehydrogen 96.3 0.0034 1.2E-07 53.1 4.5 35 58-92 6-40 (319)
319 1pzg_A LDH, lactate dehydrogen 96.3 0.0044 1.5E-07 52.7 5.1 36 57-92 8-44 (331)
320 4e12_A Diketoreductase; oxidor 96.3 0.0048 1.6E-07 51.2 5.3 35 58-92 4-38 (283)
321 3i83_A 2-dehydropantoate 2-red 96.3 0.0042 1.4E-07 52.6 5.0 33 59-91 3-35 (320)
322 3hn2_A 2-dehydropantoate 2-red 96.1 0.0047 1.6E-07 52.0 4.6 33 59-91 3-35 (312)
323 3ghy_A Ketopantoate reductase 96.1 0.0071 2.4E-07 51.5 5.3 33 58-90 3-35 (335)
324 4dio_A NAD(P) transhydrogenase 96.0 0.0075 2.6E-07 52.4 5.2 37 57-93 189-225 (405)
325 3k96_A Glycerol-3-phosphate de 96.0 0.0077 2.6E-07 51.7 5.3 36 57-92 28-63 (356)
326 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.0078 2.7E-07 47.9 4.8 35 57-91 30-64 (223)
327 3tl2_A Malate dehydrogenase; c 96.0 0.008 2.7E-07 50.6 5.1 36 56-91 6-42 (315)
328 3g17_A Similar to 2-dehydropan 95.9 0.0066 2.3E-07 50.6 4.5 33 59-91 3-35 (294)
329 2raf_A Putative dinucleotide-b 95.9 0.009 3.1E-07 47.1 5.0 35 58-92 19-53 (209)
330 2y0c_A BCEC, UDP-glucose dehyd 95.9 0.0072 2.5E-07 54.1 4.9 36 57-92 7-42 (478)
331 3gg2_A Sugar dehydrogenase, UD 95.9 0.0076 2.6E-07 53.5 4.9 34 59-92 3-36 (450)
332 4a7p_A UDP-glucose dehydrogena 95.9 0.0086 2.9E-07 53.0 5.2 37 57-93 7-43 (446)
333 1ks9_A KPA reductase;, 2-dehyd 95.9 0.009 3.1E-07 49.5 5.1 33 60-92 2-34 (291)
334 2ew2_A 2-dehydropantoate 2-red 95.9 0.0082 2.8E-07 50.4 4.8 33 59-91 4-36 (316)
335 3p2y_A Alanine dehydrogenase/p 95.8 0.0081 2.8E-07 51.7 4.6 36 57-92 183-218 (381)
336 3vtf_A UDP-glucose 6-dehydroge 95.8 0.0088 3E-07 52.6 4.9 36 57-92 20-55 (444)
337 3k6j_A Protein F01G10.3, confi 95.8 0.01 3.5E-07 52.5 5.2 36 57-92 53-88 (460)
338 1lld_A L-lactate dehydrogenase 95.8 0.0097 3.3E-07 50.2 4.9 34 58-91 7-42 (319)
339 3g0o_A 3-hydroxyisobutyrate de 95.8 0.01 3.5E-07 49.7 4.9 36 57-92 6-41 (303)
340 3g79_A NDP-N-acetyl-D-galactos 95.7 0.0098 3.4E-07 53.0 4.9 36 57-92 17-54 (478)
341 1kyq_A Met8P, siroheme biosynt 95.7 0.0069 2.4E-07 49.8 3.6 35 57-91 12-46 (274)
342 3lk7_A UDP-N-acetylmuramoylala 95.7 0.01 3.5E-07 52.8 5.0 35 57-91 8-42 (451)
343 2x5o_A UDP-N-acetylmuramoylala 95.7 0.0088 3E-07 53.0 4.5 36 58-93 5-40 (439)
344 3doj_A AT3G25530, dehydrogenas 95.7 0.012 4.2E-07 49.4 5.2 37 57-93 20-56 (310)
345 1jw9_B Molybdopterin biosynthe 95.7 0.0099 3.4E-07 48.3 4.5 34 58-91 31-65 (249)
346 2hjr_A Malate dehydrogenase; m 95.7 0.013 4.5E-07 49.7 5.3 35 58-92 14-49 (328)
347 2ewd_A Lactate dehydrogenase,; 95.7 0.013 4.3E-07 49.5 5.2 35 58-92 4-39 (317)
348 1bg6_A N-(1-D-carboxylethyl)-L 95.6 0.011 3.9E-07 50.5 4.9 34 58-91 4-37 (359)
349 3l9w_A Glutathione-regulated p 95.6 0.012 4E-07 51.6 4.9 35 58-92 4-38 (413)
350 2qyt_A 2-dehydropantoate 2-red 95.6 0.0081 2.8E-07 50.5 3.7 32 58-89 8-45 (317)
351 1zej_A HBD-9, 3-hydroxyacyl-CO 95.6 0.01 3.6E-07 49.3 4.3 35 57-92 11-45 (293)
352 1z82_A Glycerol-3-phosphate de 95.6 0.013 4.5E-07 49.8 4.9 35 57-91 13-47 (335)
353 1zcj_A Peroxisomal bifunctiona 95.5 0.014 4.8E-07 52.0 5.1 35 58-92 37-71 (463)
354 2vns_A Metalloreductase steap3 95.5 0.019 6.5E-07 45.4 5.2 34 58-91 28-61 (215)
355 3ego_A Probable 2-dehydropanto 95.5 0.014 4.9E-07 48.9 4.7 32 59-91 3-34 (307)
356 3mog_A Probable 3-hydroxybutyr 95.4 0.017 5.7E-07 51.7 5.3 35 58-92 5-39 (483)
357 3qha_A Putative oxidoreductase 95.4 0.012 4.1E-07 49.1 4.2 36 58-93 15-50 (296)
358 1t2d_A LDH-P, L-lactate dehydr 95.4 0.02 6.8E-07 48.4 5.4 35 58-92 4-39 (322)
359 2a9f_A Putative malic enzyme ( 95.4 0.016 5.4E-07 49.9 4.8 35 57-91 187-222 (398)
360 1x13_A NAD(P) transhydrogenase 95.4 0.017 5.7E-07 50.5 5.0 35 58-92 172-206 (401)
361 3gvi_A Malate dehydrogenase; N 95.3 0.021 7.2E-07 48.2 5.3 36 57-92 6-42 (324)
362 3pef_A 6-phosphogluconate dehy 95.3 0.018 6.1E-07 47.8 4.9 35 59-93 2-36 (287)
363 3pid_A UDP-glucose 6-dehydroge 95.3 0.016 5.4E-07 51.0 4.7 35 57-92 35-69 (432)
364 4g65_A TRK system potassium up 95.3 0.0063 2.2E-07 54.2 2.2 35 58-92 3-37 (461)
365 2v6b_A L-LDH, L-lactate dehydr 95.3 0.018 6E-07 48.3 4.8 32 60-91 2-35 (304)
366 3oj0_A Glutr, glutamyl-tRNA re 95.3 0.0067 2.3E-07 44.7 2.0 34 58-91 21-54 (144)
367 1mv8_A GMD, GDP-mannose 6-dehy 95.3 0.014 4.7E-07 51.7 4.3 33 60-92 2-34 (436)
368 3dtt_A NADP oxidoreductase; st 95.3 0.021 7.2E-07 46.2 5.0 36 57-92 18-53 (245)
369 3l6d_A Putative oxidoreductase 95.3 0.024 8.1E-07 47.6 5.4 36 57-92 8-43 (306)
370 1l7d_A Nicotinamide nucleotide 95.3 0.02 7E-07 49.6 5.2 36 57-92 171-206 (384)
371 1y6j_A L-lactate dehydrogenase 95.2 0.021 7.1E-07 48.2 5.0 36 57-92 6-43 (318)
372 3hwr_A 2-dehydropantoate 2-red 95.2 0.019 6.4E-07 48.5 4.8 34 57-91 18-51 (318)
373 2uyy_A N-PAC protein; long-cha 95.2 0.025 8.6E-07 47.5 5.6 35 58-92 30-64 (316)
374 3pqe_A L-LDH, L-lactate dehydr 95.2 0.021 7.2E-07 48.3 4.9 35 57-91 4-40 (326)
375 3h8v_A Ubiquitin-like modifier 95.2 0.018 6.1E-07 47.8 4.4 35 57-91 35-70 (292)
376 4huj_A Uncharacterized protein 95.1 0.013 4.5E-07 46.6 3.3 35 58-92 23-58 (220)
377 3pdu_A 3-hydroxyisobutyrate de 95.1 0.018 6.3E-07 47.7 4.3 35 59-93 2-36 (287)
378 1d5t_A Guanine nucleotide diss 95.1 0.015 5.2E-07 51.3 3.9 38 57-94 5-42 (433)
379 1pjc_A Protein (L-alanine dehy 95.1 0.022 7.6E-07 49.0 4.8 34 58-91 167-200 (361)
380 1vl6_A Malate oxidoreductase; 95.1 0.023 7.8E-07 48.8 4.7 36 56-91 190-226 (388)
381 3gpi_A NAD-dependent epimerase 95.1 0.033 1.1E-06 45.9 5.7 35 58-92 3-37 (286)
382 3p7m_A Malate dehydrogenase; p 95.0 0.03 1E-06 47.2 5.4 36 57-92 4-40 (321)
383 1ur5_A Malate dehydrogenase; o 95.0 0.028 9.6E-07 47.2 5.2 34 59-92 3-37 (309)
384 3rui_A Ubiquitin-like modifier 95.0 0.026 8.9E-07 47.8 4.9 34 58-91 34-68 (340)
385 4dll_A 2-hydroxy-3-oxopropiona 95.0 0.023 7.9E-07 48.0 4.6 36 57-92 30-65 (320)
386 4ffl_A PYLC; amino acid, biosy 95.0 0.028 9.5E-07 48.3 5.2 34 59-92 2-35 (363)
387 1guz_A Malate dehydrogenase; o 95.0 0.028 9.5E-07 47.2 5.1 33 60-92 2-36 (310)
388 3ktd_A Prephenate dehydrogenas 94.9 0.035 1.2E-06 47.3 5.5 36 57-92 7-42 (341)
389 3ius_A Uncharacterized conserv 94.9 0.024 8.2E-07 46.7 4.5 35 58-92 5-39 (286)
390 1txg_A Glycerol-3-phosphate de 94.9 0.023 7.8E-07 48.1 4.4 30 60-89 2-31 (335)
391 3qsg_A NAD-binding phosphogluc 94.9 0.024 8.1E-07 47.7 4.4 34 58-91 24-58 (312)
392 2eez_A Alanine dehydrogenase; 94.9 0.03 1E-06 48.3 5.1 34 58-91 166-199 (369)
393 1nyt_A Shikimate 5-dehydrogena 94.9 0.06 2E-06 44.2 6.7 35 57-91 118-152 (271)
394 4ezb_A Uncharacterized conserv 94.9 0.025 8.6E-07 47.7 4.5 34 58-91 24-58 (317)
395 3ggo_A Prephenate dehydrogenas 94.9 0.035 1.2E-06 46.7 5.4 35 58-92 33-69 (314)
396 3eag_A UDP-N-acetylmuramate:L- 94.9 0.03 1E-06 47.4 5.0 35 58-92 4-39 (326)
397 2h78_A Hibadh, 3-hydroxyisobut 94.8 0.025 8.4E-07 47.3 4.4 34 59-92 4-37 (302)
398 1dlj_A UDP-glucose dehydrogena 94.8 0.02 7E-07 50.0 3.9 31 60-91 2-32 (402)
399 4e21_A 6-phosphogluconate dehy 94.8 0.031 1.1E-06 48.0 4.9 36 57-92 21-56 (358)
400 2o3j_A UDP-glucose 6-dehydroge 94.7 0.024 8.2E-07 50.8 4.2 35 58-92 9-45 (481)
401 1zud_1 Adenylyltransferase THI 94.7 0.029 1E-06 45.5 4.4 35 57-91 27-62 (251)
402 2pv7_A T-protein [includes: ch 94.7 0.036 1.2E-06 46.2 5.0 35 58-92 21-56 (298)
403 2rcy_A Pyrroline carboxylate r 94.7 0.038 1.3E-06 45.0 5.0 36 58-93 4-43 (262)
404 2vhw_A Alanine dehydrogenase; 94.7 0.036 1.2E-06 47.9 5.1 36 57-92 167-202 (377)
405 1vpd_A Tartronate semialdehyde 94.7 0.028 9.4E-07 46.8 4.3 34 59-92 6-39 (299)
406 1jay_A Coenzyme F420H2:NADP+ o 94.7 0.036 1.2E-06 43.6 4.7 32 60-91 2-34 (212)
407 3c24_A Putative oxidoreductase 94.6 0.042 1.4E-06 45.5 5.3 33 59-91 12-45 (286)
408 1a5z_A L-lactate dehydrogenase 94.6 0.031 1.1E-06 47.2 4.5 32 60-91 2-35 (319)
409 2zyd_A 6-phosphogluconate dehy 94.6 0.035 1.2E-06 49.6 5.0 36 57-92 14-49 (480)
410 3phh_A Shikimate dehydrogenase 94.6 0.044 1.5E-06 44.9 5.2 35 58-92 118-152 (269)
411 2p4q_A 6-phosphogluconate dehy 94.6 0.043 1.5E-06 49.2 5.5 36 57-92 9-44 (497)
412 3tri_A Pyrroline-5-carboxylate 94.6 0.05 1.7E-06 44.9 5.5 35 58-92 3-40 (280)
413 4gwg_A 6-phosphogluconate dehy 94.6 0.044 1.5E-06 48.9 5.4 35 58-92 4-38 (484)
414 2izz_A Pyrroline-5-carboxylate 94.5 0.041 1.4E-06 46.4 5.0 35 58-92 22-60 (322)
415 2aef_A Calcium-gated potassium 94.5 0.016 5.4E-07 46.5 2.3 35 57-92 8-42 (234)
416 2q3e_A UDP-glucose 6-dehydroge 94.5 0.03 1E-06 49.9 4.3 34 59-92 6-41 (467)
417 2f1k_A Prephenate dehydrogenas 94.5 0.041 1.4E-06 45.3 4.8 32 60-91 2-33 (279)
418 3d0o_A L-LDH 1, L-lactate dehy 94.5 0.039 1.3E-06 46.5 4.7 35 57-91 5-41 (317)
419 2wtb_A MFP2, fatty acid multif 94.4 0.043 1.5E-06 51.7 5.4 34 59-92 313-346 (725)
420 1yj8_A Glycerol-3-phosphate de 94.4 0.035 1.2E-06 48.0 4.5 34 59-92 22-62 (375)
421 3ojo_A CAP5O; rossmann fold, c 94.4 0.031 1.1E-06 49.1 4.1 35 58-92 11-45 (431)
422 3dfu_A Uncharacterized protein 94.4 0.012 4E-07 47.1 1.3 34 57-90 5-38 (232)
423 1evy_A Glycerol-3-phosphate de 94.4 0.021 7.1E-07 49.2 2.9 32 60-91 17-48 (366)
424 1x0v_A GPD-C, GPDH-C, glycerol 94.4 0.024 8.2E-07 48.5 3.3 34 59-92 9-49 (354)
425 2gf2_A Hibadh, 3-hydroxyisobut 94.3 0.043 1.5E-06 45.6 4.7 33 60-92 2-34 (296)
426 3h5n_A MCCB protein; ubiquitin 94.3 0.041 1.4E-06 47.1 4.6 35 57-91 117-152 (353)
427 3don_A Shikimate dehydrogenase 94.3 0.07 2.4E-06 43.9 5.8 36 57-92 116-152 (277)
428 2i6t_A Ubiquitin-conjugating e 94.3 0.042 1.4E-06 46.0 4.5 35 58-92 14-50 (303)
429 2egg_A AROE, shikimate 5-dehyd 94.3 0.046 1.6E-06 45.6 4.8 35 57-91 140-175 (297)
430 3cky_A 2-hydroxymethyl glutara 94.3 0.039 1.4E-06 45.9 4.4 35 58-92 4-38 (301)
431 3e8x_A Putative NAD-dependent 94.3 0.053 1.8E-06 43.3 5.0 36 57-92 20-56 (236)
432 1ldn_A L-lactate dehydrogenase 94.3 0.049 1.7E-06 45.8 4.9 35 57-91 5-41 (316)
433 3ldh_A Lactate dehydrogenase; 94.2 0.049 1.7E-06 46.0 4.8 34 58-91 21-56 (330)
434 1yqg_A Pyrroline-5-carboxylate 94.2 0.044 1.5E-06 44.7 4.5 32 60-91 2-34 (263)
435 3gt0_A Pyrroline-5-carboxylate 94.2 0.06 2.1E-06 43.5 5.2 34 59-92 3-40 (247)
436 3ond_A Adenosylhomocysteinase; 94.2 0.039 1.3E-06 49.0 4.3 35 57-91 264-298 (488)
437 1hdo_A Biliverdin IX beta redu 94.2 0.064 2.2E-06 41.5 5.2 34 59-92 4-38 (206)
438 3vps_A TUNA, NAD-dependent epi 94.2 0.061 2.1E-06 44.9 5.4 36 57-92 6-42 (321)
439 1hyh_A L-hicdh, L-2-hydroxyiso 94.2 0.043 1.5E-06 46.0 4.4 33 59-91 2-36 (309)
440 1oju_A MDH, malate dehydrogena 94.2 0.045 1.5E-06 45.5 4.4 33 60-92 2-36 (294)
441 3ew7_A LMO0794 protein; Q8Y8U8 94.2 0.061 2.1E-06 42.2 5.0 33 60-92 2-35 (221)
442 2g5c_A Prephenate dehydrogenas 94.1 0.053 1.8E-06 44.7 4.8 33 59-91 2-36 (281)
443 1p77_A Shikimate 5-dehydrogena 94.1 0.078 2.7E-06 43.5 5.8 35 57-91 118-152 (272)
444 3fi9_A Malate dehydrogenase; s 94.1 0.067 2.3E-06 45.5 5.4 35 57-91 7-44 (343)
445 4gsl_A Ubiquitin-like modifier 94.1 0.052 1.8E-06 49.5 4.9 34 58-91 326-360 (615)
446 3vku_A L-LDH, L-lactate dehydr 94.1 0.054 1.8E-06 45.7 4.8 35 57-91 8-44 (326)
447 2pgd_A 6-phosphogluconate dehy 94.1 0.06 2E-06 48.2 5.3 34 59-92 3-36 (482)
448 1pjq_A CYSG, siroheme synthase 94.1 0.051 1.7E-06 48.3 4.8 35 57-91 11-45 (457)
449 1y8q_A Ubiquitin-like 1 activa 94.0 0.045 1.5E-06 46.7 4.2 35 57-91 35-70 (346)
450 2cvz_A Dehydrogenase, 3-hydrox 94.0 0.048 1.6E-06 45.1 4.4 32 60-92 3-34 (289)
451 3tnl_A Shikimate dehydrogenase 94.0 0.13 4.3E-06 43.3 6.9 35 57-91 153-188 (315)
452 4gbj_A 6-phosphogluconate dehy 94.0 0.038 1.3E-06 46.1 3.7 36 58-93 5-40 (297)
453 3nep_X Malate dehydrogenase; h 94.0 0.054 1.8E-06 45.5 4.6 33 60-92 2-36 (314)
454 3d1l_A Putative NADP oxidoredu 94.0 0.059 2E-06 44.0 4.8 33 59-91 11-44 (266)
455 3jyo_A Quinate/shikimate dehyd 94.0 0.12 4.1E-06 42.7 6.6 35 57-91 126-161 (283)
456 1wdk_A Fatty oxidation complex 94.0 0.054 1.8E-06 51.0 5.0 35 58-92 314-348 (715)
457 2rir_A Dipicolinate synthase, 93.9 0.07 2.4E-06 44.5 5.2 35 57-91 156-190 (300)
458 1np3_A Ketol-acid reductoisome 93.9 0.077 2.6E-06 45.1 5.5 34 59-92 17-50 (338)
459 4aj2_A L-lactate dehydrogenase 93.9 0.072 2.5E-06 45.1 5.2 35 57-91 18-54 (331)
460 1tt5_B Ubiquitin-activating en 93.9 0.067 2.3E-06 47.1 5.1 34 58-91 40-74 (434)
461 3d4o_A Dipicolinate synthase s 93.9 0.072 2.4E-06 44.3 5.1 35 57-91 154-188 (293)
462 3vh1_A Ubiquitin-like modifier 93.9 0.056 1.9E-06 49.2 4.7 34 58-91 327-361 (598)
463 3h2s_A Putative NADH-flavin re 93.8 0.071 2.4E-06 42.0 4.9 33 60-92 2-35 (224)
464 4e4t_A Phosphoribosylaminoimid 93.8 0.076 2.6E-06 46.6 5.4 37 56-92 33-69 (419)
465 4gx0_A TRKA domain protein; me 93.8 0.069 2.4E-06 48.8 5.4 35 59-93 349-383 (565)
466 3c7a_A Octopine dehydrogenase; 93.8 0.035 1.2E-06 48.4 3.3 30 59-88 3-33 (404)
467 3u62_A Shikimate dehydrogenase 93.8 0.079 2.7E-06 43.0 5.1 32 60-91 110-142 (253)
468 2hk9_A Shikimate dehydrogenase 93.8 0.061 2.1E-06 44.3 4.5 34 58-91 129-162 (275)
469 2iz1_A 6-phosphogluconate dehy 93.8 0.077 2.6E-06 47.4 5.4 35 58-92 5-39 (474)
470 3gvp_A Adenosylhomocysteinase 93.7 0.056 1.9E-06 47.1 4.3 35 57-91 219-253 (435)
471 4b4o_A Epimerase family protei 93.7 0.082 2.8E-06 43.8 5.2 33 60-92 2-35 (298)
472 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.7 0.071 2.4E-06 47.6 5.0 32 60-91 3-34 (478)
473 1nvt_A Shikimate 5'-dehydrogen 93.6 0.1 3.5E-06 43.2 5.6 34 57-91 127-160 (287)
474 3fbt_A Chorismate mutase and s 93.6 0.14 4.7E-06 42.3 6.3 35 57-91 121-156 (282)
475 3two_A Mannitol dehydrogenase; 93.6 0.14 4.7E-06 43.6 6.5 37 57-93 176-212 (348)
476 3o8q_A Shikimate 5-dehydrogena 93.6 0.16 5.5E-06 41.9 6.6 35 57-91 125-160 (281)
477 3r6d_A NAD-dependent epimerase 93.5 0.11 3.8E-06 40.9 5.5 34 59-92 6-41 (221)
478 3ce6_A Adenosylhomocysteinase; 93.5 0.062 2.1E-06 48.0 4.2 36 57-92 273-308 (494)
479 4id9_A Short-chain dehydrogena 93.4 0.099 3.4E-06 44.3 5.4 36 57-92 18-54 (347)
480 3t4e_A Quinate/shikimate dehyd 93.4 0.18 6.3E-06 42.2 6.8 35 57-91 147-182 (312)
481 2d5c_A AROE, shikimate 5-dehyd 93.4 0.098 3.4E-06 42.7 5.0 32 60-91 118-149 (263)
482 3dhn_A NAD-dependent epimerase 93.3 0.072 2.4E-06 42.1 4.1 35 59-93 5-40 (227)
483 3pwz_A Shikimate dehydrogenase 93.3 0.1 3.5E-06 42.8 5.1 35 57-91 119-154 (272)
484 2qrj_A Saccharopine dehydrogen 93.3 0.078 2.7E-06 45.7 4.4 35 57-91 213-251 (394)
485 3zwc_A Peroxisomal bifunctiona 93.3 0.073 2.5E-06 50.1 4.6 35 58-92 316-350 (742)
486 3orq_A N5-carboxyaminoimidazol 93.3 0.12 4E-06 44.7 5.6 36 57-92 11-46 (377)
487 2ahr_A Putative pyrroline carb 93.3 0.075 2.6E-06 43.2 4.2 34 59-92 4-37 (259)
488 3b1f_A Putative prephenate deh 93.2 0.091 3.1E-06 43.4 4.6 34 58-91 6-41 (290)
489 3q2o_A Phosphoribosylaminoimid 93.2 0.12 4.1E-06 44.8 5.5 36 57-92 13-48 (389)
490 2we8_A Xanthine dehydrogenase; 93.1 0.11 3.9E-06 44.8 5.2 37 57-93 203-239 (386)
491 1i36_A Conserved hypothetical 93.1 0.08 2.7E-06 43.1 4.1 30 60-89 2-31 (264)
492 2d4a_B Malate dehydrogenase; a 93.1 0.11 3.6E-06 43.6 4.9 33 60-92 1-34 (308)
493 1lu9_A Methylene tetrahydromet 93.1 0.22 7.5E-06 41.1 6.8 35 57-91 118-153 (287)
494 1y8q_B Anthracycline-, ubiquit 93.1 0.084 2.9E-06 48.6 4.5 34 58-91 17-51 (640)
495 2dvm_A Malic enzyme, 439AA lon 93.1 0.2 7E-06 43.9 6.8 34 57-90 185-225 (439)
496 3uko_A Alcohol dehydrogenase c 93.0 0.14 4.7E-06 44.2 5.7 36 57-92 193-229 (378)
497 3i6i_A Putative leucoanthocyan 93.0 0.13 4.3E-06 43.7 5.4 34 58-91 10-44 (346)
498 1gpj_A Glutamyl-tRNA reductase 93.0 0.1 3.4E-06 45.6 4.8 35 57-91 166-201 (404)
499 1yb4_A Tartronic semialdehyde 93.0 0.061 2.1E-06 44.5 3.3 33 59-92 4-36 (295)
500 1ez4_A Lactate dehydrogenase; 92.9 0.11 3.9E-06 43.6 4.9 35 57-91 4-40 (318)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=1.1e-29 Score=225.62 Aligned_cols=224 Identities=23% Similarity=0.436 Sum_probs=184.1
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 55 ~~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
...++||+|||||++||++|+.|+++|++|+|+||.+.+...++++.+.+++.+.++.+|+++.+.........+.++..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 99 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDF 99 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEEC
Confidence 34579999999999999999999999999999999998877889999999999999999999999888888888888887
Q ss_pred C-CceEEEecCCCC--CCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCC
Q 022277 135 D-GRELRSFGFKDE--DASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDG 211 (300)
Q Consensus 135 ~-~~~~~~~~~~~~--~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G 211 (300)
. +..+..++.... ..+...+.++|..|.+.|.+.+..++|+++++|++++.++++ +.|.+.+|++++||+||+|||
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADG-VTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCC
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCc-EEEEEcCCCEEeeCEEEECCC
Confidence 6 776666654321 112446678999999999988855899999999999998887 558999999999999999999
Q ss_pred CChHhhhhc-CCC-CCccccceEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCCC
Q 022277 212 IRSPIAKWI-GFS-EPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNPT 279 (300)
Q Consensus 212 ~~s~~r~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 279 (300)
.+|.+|+.+ +.. .+.+.++.++++.++.+...+....+..+++++++++++|+++++..|++.+..+.
T Consensus 179 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 248 (407)
T 3rp8_A 179 SHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPA 248 (407)
T ss_dssp TTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCT
T ss_pred cChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCc
Confidence 999999999 775 66777888888877765544445566778899999999999999998888876544
No 2
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=1.1e-25 Score=197.89 Aligned_cols=212 Identities=22% Similarity=0.316 Sum_probs=169.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+...+.+..+.+.+.+.++.+|+++.+.........+.+... +
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-g 88 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-N 88 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-T
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-C
Confidence 468999999999999999999999999999999988877788999999999999999999998877777777777776 6
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
..+..++.. +.....++|..+.+.|.+.+ .|++++++++|++++. ++ .|++.+|++++||+||+|||.+|
T Consensus 89 ~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 89 KSVSKETFN----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEETTSCEEECSEEEECCCTTC
T ss_pred ceeeeccCC----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEECCCCEEEcCEEEECCCccH
Confidence 655544432 22357889999999888776 4899999999999987 33 48888888899999999999999
Q ss_pred HhhhhcCCC-CCccccceEEEEEeeCC----CCCCCCCceEE--EEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022277 215 PIAKWIGFS-EPKYVGHCAYRGLGYYP----NGQPFEPKLNY--IYGRGVRAGYVPVSPTKVYWFICHNN 277 (300)
Q Consensus 215 ~~r~~~g~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (300)
.+|+.++.. .+.+.++.++++.++.. ........... +++++++++++|+++++..|++.+..
T Consensus 161 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 230 (379)
T 3alj_A 161 KVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPA 230 (379)
T ss_dssp HHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECT
T ss_pred HHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecC
Confidence 999999753 34556777777766653 11111112222 56788899999999999888777754
No 3
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.94 E-value=1.1e-25 Score=199.39 Aligned_cols=214 Identities=20% Similarity=0.237 Sum_probs=166.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+...+++..+.+.+.+.++.+|+++.+.........+.++...+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 45899999999999999999999999999999998776778889999999999999999988877666666677766666
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCC---CCeEEeCCeEEEEEEcCCceE-EEEEcCCcEEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLP---PESVQFSSELAKIETSGNGVT-ILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~---g~~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~ad~vV~A~G~ 212 (300)
.....++............+++..+.+.|.+.+. |++++++++|++++.+++++. .|++.+|++++||+||+|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 5555555433222334567899999999988772 789999999999998887752 588999988999999999999
Q ss_pred ChHhhhhcCCCC-Cc--cccc--eEEEEEeeCCCCCCCCCceEEEEeC-CeEEEEEEcCCCeEEEEEEE
Q 022277 213 RSPIAKWIGFSE-PK--YVGH--CAYRGLGYYPNGQPFEPKLNYIYGR-GVRAGYVPVSPTKVYWFICH 275 (300)
Q Consensus 213 ~s~~r~~~g~~~-~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~ 275 (300)
+|.+|+.+|... +. +.++ .++.+.++.+ .+.. . .++++ +++++++|++++.+.|.+.+
T Consensus 165 ~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~ 228 (399)
T 2x3n_A 165 ASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV--AERN--R-LYVDSQGGLAYFYPIGFDRARLVVSF 228 (399)
T ss_dssp TCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH--HHCE--E-EEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred ChHHHHHhCCCccccCCCCCCceEEEEEEecCC--CCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEe
Confidence 999999998654 33 5566 6666544322 1211 3 56677 88999999999887776644
No 4
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.94 E-value=1.4e-24 Score=197.04 Aligned_cols=210 Identities=20% Similarity=0.237 Sum_probs=156.0
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 55 ~~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
....+||+|||||++||++|+.|+++|++|+||||.+.+...+++..+.+++++.++++|+++.+... .......+
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~--- 83 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF--- 83 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE---
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc---
Confidence 34679999999999999999999999999999999998877888999999999999999999887654 22111111
Q ss_pred CCceEEEecCCCCCC-CcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCc---EEEcCEEEE
Q 022277 135 DGRELRSFGFKDEDA-SQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT---RIYANIVIG 208 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~---~~~ad~vV~ 208 (300)
.+. .+++..... ......+.+..+.+.|.+.+ .|++|+++++|++++++++++. |++.++. +++||+||+
T Consensus 84 ~~~---~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVg 159 (500)
T 2qa1_A 84 GGL---PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVRGPEGKHTLRAAYLVG 159 (500)
T ss_dssp TTE---EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEEETTEEEEEEESEEEE
T ss_pred cce---ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEEcCCCCEEEEeCEEEE
Confidence 111 122221111 12346788999999888776 4899999999999999888744 7787764 799999999
Q ss_pred cCCCChHhhhhcCCCCCccc-cceEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEE
Q 022277 209 CDGIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICH 275 (300)
Q Consensus 209 A~G~~s~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 275 (300)
|||.+|.+|+.+|+..+... .+..+.+.+..+. .+....+++.++++++++|++++.+++.+..
T Consensus 160 ADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~ 224 (500)
T 2qa1_A 160 CDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE---LQPRMIGETLPGGMVMVGPLPGGITRIIVCE 224 (500)
T ss_dssp CCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC---CCCEEEEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred CCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC---CCCceEEEECCCcEEEEEEcCCCEEEEEEEc
Confidence 99999999999998766443 3444544444432 1222455677888999999999876655544
No 5
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=2.4e-24 Score=190.54 Aligned_cols=201 Identities=23% Similarity=0.246 Sum_probs=156.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc-CCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC-
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL-RTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE- 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~-~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~- 134 (300)
..+||+|||||++||++|+.|++.|++|+|+|+.+.+ ...+.++.+.+++.+.++.+|+.+ ...........+...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEEecC
Confidence 5689999999999999999999999999999999875 345778889999999999999987 344455556666665
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
.+..+...+.. ...+.+..+.+.|.+.+++++|+++++|++++.++++ +.|++.+|+++++|+||+|||.+|
T Consensus 82 ~g~~~~~~~~~-------~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 82 TGERVGSVPAD-------WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-VQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp TCCEEEEEECC-------CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-EEEEETTSCEEEESEEEECCCTTC
T ss_pred CCCccccccCc-------ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-EEEEECCCCEEECCEEEECCCcch
Confidence 66655444321 1246778888888888788999999999999988777 458899998999999999999999
Q ss_pred HhhhhcCCCCCccccceEEEEEeeCCCCCC-----CCCceEEEEeCCeEEEEEEcCCC
Q 022277 215 PIAKWIGFSEPKYVGHCAYRGLGYYPNGQP-----FEPKLNYIYGRGVRAGYVPVSPT 267 (300)
Q Consensus 215 ~~r~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~ 267 (300)
.+|+.++...+.+.++.+|++.++.....+ +.....++++++.++.++|++++
T Consensus 154 ~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (397)
T 2vou_A 154 VVRKRLLGIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGR 211 (397)
T ss_dssp HHHHHHHCCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCS
T ss_pred hHHHHhccCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCC
Confidence 999999722466667778877665321111 11345566788888888998864
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.94 E-value=1.7e-24 Score=196.46 Aligned_cols=208 Identities=20% Similarity=0.202 Sum_probs=156.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++||++|+.|+++|++|+||||.+.+...+++..+.++++++++++|+++.+... .......+ .+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~---~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHF---GG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEE---TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-ccccccee---cc
Confidence 578999999999999999999999999999999998877888999999999999999999887654 22111111 11
Q ss_pred ceEEEecCCCCC-CCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCc---EEEcCEEEEcC
Q 022277 137 RELRSFGFKDED-ASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT---RIYANIVIGCD 210 (300)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~---~~~ad~vV~A~ 210 (300)
. .+++.... .......+.+..+.+.|.+.+ .|++|+++++|++++++++++. |++.++. +++||+||+||
T Consensus 87 ~---~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g~~~~~a~~vVgAD 162 (499)
T 2qa2_A 87 R---PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVEGPDGPRSLTTRYVVGCD 162 (499)
T ss_dssp E---EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEECSSCEEEEEEEEEEECC
T ss_pred e---ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEcCCCcEEEEeCEEEEcc
Confidence 1 12222111 122346788999999988776 4899999999999999888744 8887764 79999999999
Q ss_pred CCChHhhhhcCCCCCccc-cceEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEE
Q 022277 211 GIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICH 275 (300)
Q Consensus 211 G~~s~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 275 (300)
|.+|.+|+.+|+..+... .+..+.+.+..+. + +....+++.++++++++|++++.+++.+..
T Consensus 163 G~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~--~-~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~ 225 (499)
T 2qa2_A 163 GGRSTVRKAAGFDFPGTSASREMFLADIRGCE--I-TPRPIGETVPLGMVMSAPLGDGVDRIIVCE 225 (499)
T ss_dssp CTTCHHHHHTTCCCCEECCCCCEEEEEEESCC--C-CCEEEEEEETTEEEEEEECSSSCEEEEEEE
T ss_pred CcccHHHHHcCCCCCCCCCccEEEEEEEEECC--C-CcceEEEECCCeEEEEEEcCCCEEEEEEEe
Confidence 999999999988765443 3344544444432 1 222455677888999999999876655554
No 7
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.93 E-value=3.8e-24 Score=189.37 Aligned_cols=220 Identities=22% Similarity=0.232 Sum_probs=164.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC--CCceeeEch-hHHHHHHHcCCcHHHHhccccccceEEE
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFK-NGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~--~g~~~~~~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 132 (300)
+..+||+|||||++|+++|+.|++.|++|+|+||.+.+.. .|.++.+.+ ...+.++.+|+++.+......... .++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 3568999999999999999999999999999999986542 455666665 568899999999988765555444 556
Q ss_pred cCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 133 SEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
...+........... .......+.|..|.+.|.+.+.+++|+++++|++++.++++ +.|++.+|++++||+||+|||.
T Consensus 103 ~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 103 DEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK-WTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp CSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS-EEEEETTSCCEEESEEEECSCT
T ss_pred CCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE-EEEEECCCcEEecCEEEECCCc
Confidence 655654433310111 11233468999999999998877899999999999988776 5588999988999999999999
Q ss_pred ChHhhhhcCCCCCccccceEEEEEeeCCCC-CC-----CCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCC
Q 022277 213 RSPIAKWIGFSEPKYVGHCAYRGLGYYPNG-QP-----FEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNP 278 (300)
Q Consensus 213 ~s~~r~~~g~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 278 (300)
+|.+|+.++...+.+.++.++++.+..... .+ ......++++++..++++|.+++.+.|++.+..+
T Consensus 181 ~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 252 (398)
T 2xdo_A 181 MSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTP 252 (398)
T ss_dssp TCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECC
T ss_pred chhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecC
Confidence 999999997667777787777765542110 01 1222345567888888899999988887776544
No 8
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.93 E-value=2.7e-24 Score=197.31 Aligned_cols=221 Identities=18% Similarity=0.186 Sum_probs=158.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccce------E
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGM------A 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~------~ 130 (300)
..+||+|||||++||++|+.|+++|++|+||||.+.+...+++..+.+++.+.++++|+++.+.......... .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 5689999999999999999999999999999999988888889999999999999999999988766554332 3
Q ss_pred EEcCCCceEEEecCC--------CCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCC----ceEEEEEc
Q 022277 131 VKSEDGRELRSFGFK--------DEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGN----GVTILELV 196 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~----~~~~v~~~ 196 (300)
.....+..+..+... ....+.....+++..+.+.|.+.+ .|++|+++++|++++.+++ + +.+.+.
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~ 162 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG-VTARLA 162 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE-EEEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc-EEEEEE
Confidence 333445544422111 111233356788999999988777 4899999999999999877 6 447777
Q ss_pred CC---cEEEcCEEEEcCCCChHhhhhcCCCCCccccceEEE-EEeeCCCCCC--C-CCceEEEEeCCeEEEEEEcCCCeE
Q 022277 197 NG---TRIYANIVIGCDGIRSPIAKWIGFSEPKYVGHCAYR-GLGYYPNGQP--F-EPKLNYIYGRGVRAGYVPVSPTKV 269 (300)
Q Consensus 197 ~g---~~~~ad~vV~A~G~~s~~r~~~g~~~~~~~~~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~p~~~~~~ 269 (300)
++ .+++||+||+|||.+|.+|+.+|+..+.......+. .....+.... . ......+..++...+++|++++..
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~ 242 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDR 242 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTE
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCE
Confidence 76 689999999999999999999988755443222111 1122211111 1 122344556777888899997555
Q ss_pred EEEEEEcCC
Q 022277 270 YWFICHNNP 278 (300)
Q Consensus 270 ~~~~~~~~~ 278 (300)
+.+++..++
T Consensus 243 ~~~~~~~~~ 251 (535)
T 3ihg_A 243 HTLFVEYDP 251 (535)
T ss_dssp EEEEEEECT
T ss_pred EEEEEeeCc
Confidence 444444333
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.92 E-value=3.4e-23 Score=183.95 Aligned_cols=206 Identities=23% Similarity=0.327 Sum_probs=156.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc-EEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~-V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++||++|+.|++.|++ |+|+||.+.+...+.++.+.+++.+.|+.+|+++.+.........+.+....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 458999999999999999999999999 9999999988778889999999999999999999888776666677777766
Q ss_pred CceEEEecCCCC-CCCcceeeecHHHHHHHHHhcCC---C-CeEEeCCeEEEEEEcCCceEEEEEcC---C--cEEEcCE
Q 022277 136 GRELRSFGFKDE-DASQEVRAVERRILLETLANQLP---P-ESVQFSSELAKIETSGNGVTILELVN---G--TRIYANI 205 (300)
Q Consensus 136 ~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~l~~~~~---g-~~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~ 205 (300)
+..+...+.... ........+.|..|.+.|.+.+. + ++|+++++|++++. +++ +.|.+.+ | .+++||+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESE
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCE
Confidence 765544332111 11233467899999998887762 4 58999999999988 666 4477665 6 4799999
Q ss_pred EEEcCCCChHhhhhcCCC--CCccccceEEEEEeeCCCCCCCCCceEEEEeC--CeEEEEEEcCC
Q 022277 206 VIGCDGIRSPIAKWIGFS--EPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGR--GVRAGYVPVSP 266 (300)
Q Consensus 206 vV~A~G~~s~~r~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~ 266 (300)
||+|||.+|.+|+.++.. .+.+.+...|++..+.+.. ......++++. +.+++++|+++
T Consensus 161 vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~ 223 (410)
T 3c96_A 161 LVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISA 223 (410)
T ss_dssp EEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCH
T ss_pred EEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCC
Confidence 999999999999999543 3556677777766654322 12233344553 66788999863
No 10
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.92 E-value=3e-23 Score=183.24 Aligned_cols=217 Identities=16% Similarity=0.121 Sum_probs=149.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC-CCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT-GGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~-~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.++. ...+..+. .+.++.+|+++...........+.+....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcCC
Confidence 358999999999999999999999999999999986543 23333333 36678888865543344555666777666
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc---CCcEEEcCEEEEcC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGTRIYANIVIGCD 210 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~ad~vV~A~ 210 (300)
+.....+..... .....+.+++..+.+.|.+.+ .|++++++++|++++.+++++.+|.+. ++.+++||+||+|+
T Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~ 158 (397)
T 3cgv_A 80 EKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp CSSCEEEC------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECC
Confidence 554222322211 133466789999999888776 489999999999999887775557663 45589999999999
Q ss_pred CCChHhhhhcCCCC-Cccccce--EEEEEeeCCCCCCCCCceEEEE---eCCeEEEEEEcCCCeEEEEEEEcCCC
Q 022277 211 GIRSPIAKWIGFSE-PKYVGHC--AYRGLGYYPNGQPFEPKLNYIY---GRGVRAGYVPVSPTKVYWFICHNNPT 279 (300)
Q Consensus 211 G~~s~~r~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~ 279 (300)
|.+|.+++.+|... +...... .+......... .+....+++ .++++.|++|.++++..+.+....+.
T Consensus 159 G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~ 231 (397)
T 3cgv_A 159 GFESEFGRWAGLKSVILARNDIISALQYRMINVDV--DPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW 231 (397)
T ss_dssp CTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCC--CTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT
T ss_pred CcchHhHHhcCCCccCCChhheeEEEEEEeccCCC--CCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEecccc
Confidence 99999999998766 3212121 22222222111 123344444 47889999999999887777666544
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.91 E-value=3e-23 Score=183.28 Aligned_cols=217 Identities=17% Similarity=0.193 Sum_probs=147.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc--CCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL--RTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~--~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.+ ....++..+.+.+.+.++.+|+++.+.........+.+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 479999999999999999999999999999998753 122233358899999999999999888766666666665432
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCD 210 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~ 210 (300)
. ...+++.....+.....+.+..+.+.|.+.+ .|++++++++|++++.+++..+.|.+ .+|+ +++||+||+||
T Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 82 Q--RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp E--EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred c--eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 2 1222222111123455667777777777655 48999999999999876433244777 6786 79999999999
Q ss_pred CCChHhhhhcCCC-CCccccc--eEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCC
Q 022277 211 GIRSPIAKWIGFS-EPKYVGH--CAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNP 278 (300)
Q Consensus 211 G~~s~~r~~~g~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 278 (300)
|.+|.+|+.++.. .+.+.+. ..+.+...... +......+...+++++++.|..++...|++.+...
T Consensus 160 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T 1k0i_A 160 GFHGISRQSIPAERLKVFERVYPFGWLGLLADTP--PVSHELIYANHPRGFALCSQRSATRSQYYVQVPLS 228 (394)
T ss_dssp CTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSC--CSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTT
T ss_pred CCCcHHHHhcCccccccccccccceeEEEecCCC--CCccceEEEEcCCceEEEEecCCCcEEEEEEeCCC
Confidence 9999999999754 2333332 23333332111 11112223334666776777777777766665543
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.91 E-value=4.1e-24 Score=196.55 Aligned_cols=213 Identities=20% Similarity=0.190 Sum_probs=145.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
+.+||+|||||++||++|+.|+++|++|+||||.+.+...+++..+.+.+.++++.+|+++.+...........+ .+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~---~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPF---AG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCB---TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCcee---CC
Confidence 468999999999999999999999999999999998888889999999999999999999988765544321100 11
Q ss_pred ceEEEecCCCCC-CCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEE--cCC-cEEEcCEEEEcC
Q 022277 137 RELRSFGFKDED-ASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL--VNG-TRIYANIVIGCD 210 (300)
Q Consensus 137 ~~~~~~~~~~~~-~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~--~~g-~~~~ad~vV~A~ 210 (300)
.....+++.... .......+.+..+.+.|.+.+ .|++|+++++|++++.+++++. |++ .+| ++++||+||+||
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEEETTEEEEEEESEEEECS
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEEeCCCcEEEEeCEEEEcC
Confidence 100011111111 122345688999998888776 3889999999999998887744 666 677 689999999999
Q ss_pred CCChHhhhhcCCCCCccc-cceEEEEEeeCCCCCCCCCceEEEEeCCeEEEE-EEcCCCeE-EEEEEEc
Q 022277 211 GIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGY-VPVSPTKV-YWFICHN 276 (300)
Q Consensus 211 G~~s~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~ 276 (300)
|.+|.+|+.+|+..+... .+..+. +.+....+.. .+.+...+.+++++ +|++++.. ++++...
T Consensus 204 G~~S~vR~~lGi~~~~~~~~~~~~~--~~v~~~~~~~-~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 204 GGRSTVRRLAADRFPGTEATVRALI--GYVTTPEREV-PRRWERTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp CSSCHHHHHTTCCCCCCCCCEEEEE--EECCCCSCSS-CCCCCCCCSSCEEECCCC------CEEEEEE
T ss_pred CCCchHHHHcCCCCccceeeeEEEE--EEEEecCCCc-ceEEEecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999999999988766543 333333 3333332221 12222345555656 79998876 5555444
No 13
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.91 E-value=9.4e-23 Score=187.30 Aligned_cols=214 Identities=20% Similarity=0.253 Sum_probs=153.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccc---eEEE-
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKG---MAVK- 132 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~---~~~~- 132 (300)
..+||+|||||++||++|+.|+++|++|+||||.+.+...+++..+.+++.+.++++|+.+.+......... ..+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 458999999999999999999999999999999998877888999999999999999999988776555432 2222
Q ss_pred cCCCceEEEecCCCC-------CCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---C--cE
Q 022277 133 SEDGRELRSFGFKDE-------DASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---G--TR 200 (300)
Q Consensus 133 ~~~~~~~~~~~~~~~-------~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~ 200 (300)
...+..+..+++... ..+.....+.+..+.+.|.+.+... |+++++|++++++++++. |++.+ | .+
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~-v~~~~~~~G~~~~ 182 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVR-ATITDLRTGATRA 182 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEE-EEEEETTTCCEEE
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEE-EEEEECCCCCEEE
Confidence 234555544444221 1223456788999999998877444 999999999999888744 66655 6 47
Q ss_pred EEcCEEEEcCCCChHhhhhcCCCCCcccc-ceEEEEEeeCCCC----CCCCCceEEEEeCC-eEEEEEEcCCCeEEEE
Q 022277 201 IYANIVIGCDGIRSPIAKWIGFSEPKYVG-HCAYRGLGYYPNG----QPFEPKLNYIYGRG-VRAGYVPVSPTKVYWF 272 (300)
Q Consensus 201 ~~ad~vV~A~G~~s~~r~~~g~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~ 272 (300)
++||+||+|||.+|.+|+.+|+..+.... ...+...+..+.. ........++++++ .+.+++|++++..+.+
T Consensus 183 i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 260 (549)
T 2r0c_A 183 VHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGLYRL 260 (549)
T ss_dssp EEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSEEEE
T ss_pred EEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcEEEE
Confidence 99999999999999999999887654332 2233333333210 00122334444566 7888999987554433
No 14
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.91 E-value=7.3e-23 Score=191.49 Aligned_cols=220 Identities=18% Similarity=0.182 Sum_probs=158.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-----cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-----LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAV 131 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-----~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 131 (300)
..+||+|||||++||++|+.|++ .|++|+||||.+.+...+++..+.++++++|+++|+++.+.........+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 35899999999999999999999 9999999999988877899999999999999999999999887777777777
Q ss_pred EcCC--CceEE--EecCCC-CCCCcceeeecHHHHHHHHHhcCC--C---CeEEeCCeEEEEEEcC--------CceEEE
Q 022277 132 KSED--GRELR--SFGFKD-EDASQEVRAVERRILLETLANQLP--P---ESVQFSSELAKIETSG--------NGVTIL 193 (300)
Q Consensus 132 ~~~~--~~~~~--~~~~~~-~~~~~~~~~i~~~~l~~~l~~~~~--g---~~i~~~~~v~~i~~~~--------~~~~~v 193 (300)
+... +.... .++... .........+++..+.+.|.+.+. + ++|+++++|++++.++ ++ +.|
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~-V~v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP-VTM 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC-EEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC-EEE
Confidence 6643 32221 122111 112334567889999998887772 3 8999999999998865 24 335
Q ss_pred EEc------------------------------------------CC--cEEEcCEEEEcCCCChHhhhhcCCCCCcccc
Q 022277 194 ELV------------------------------------------NG--TRIYANIVIGCDGIRSPIAKWIGFSEPKYVG 229 (300)
Q Consensus 194 ~~~------------------------------------------~g--~~~~ad~vV~A~G~~s~~r~~~g~~~~~~~~ 229 (300)
.+. +| ++++||+||+|||++|.+|+.+|+..+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~ 245 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQT 245 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCc
Confidence 443 35 4799999999999999999999987654433
Q ss_pred ceEEEEEeeC--CCCCCCCCceEE-EEeCCeEEEEEEcCCCeEEEEEEEcCC
Q 022277 230 HCAYRGLGYY--PNGQPFEPKLNY-IYGRGVRAGYVPVSPTKVYWFICHNNP 278 (300)
Q Consensus 230 ~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~ 278 (300)
...| ++++. ....+....... +..+.++++++|++++.+++++.+...
T Consensus 246 ~~~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~ 296 (665)
T 1pn0_A 246 DYIW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQAR 296 (665)
T ss_dssp EEEE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-
T ss_pred cEEE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCc
Confidence 3333 33332 112222122222 223577888999999977766665543
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.91 E-value=1.2e-22 Score=179.13 Aligned_cols=219 Identities=17% Similarity=0.145 Sum_probs=147.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCC-CceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG-GTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~-g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..|||+||||||+|+++|+.|+++|++|+|+||++.++.. ..+..+.+ ..++.+++............+..++.++
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 4699999999999999999999999999999998876432 22344554 3566777654443344455566677665
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc-CC--cEEEcCEEEEcC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANIVIGCD 210 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~vV~A~ 210 (300)
+.....+.... ......+.++|..+.+.|.+.+ .|++++++++|+++..+++.+..+... ++ .+++||+||+||
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAd 158 (397)
T 3oz2_A 80 EKRPIILQSEK-AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp CSSCEEEECSS-SSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CceEeeccccc-cCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCC
Confidence 55433333221 2234456789999999988776 489999999999999888876555443 33 368999999999
Q ss_pred CCChHhhhhcCCCCCccccce-EEEEEeeCCCCCCCCCceEEEEe---CCeEEEEEEcCCCeEEEEEEEcCCC
Q 022277 211 GIRSPIAKWIGFSEPKYVGHC-AYRGLGYYPNGQPFEPKLNYIYG---RGVRAGYVPVSPTKVYWFICHNNPT 279 (300)
Q Consensus 211 G~~s~~r~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~ 279 (300)
|.+|.+|+.+|...+...... ..............+....++++ ++++.|++|..++...+.+....+.
T Consensus 159 G~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~ 231 (397)
T 3oz2_A 159 GFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW 231 (397)
T ss_dssp CTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT
T ss_pred ccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccch
Confidence 999999999987644332221 11111111111122233344443 5789999999999887666655543
No 16
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.91 E-value=3.1e-22 Score=178.29 Aligned_cols=218 Identities=21% Similarity=0.233 Sum_probs=155.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhcccccc-ceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIK-GMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~~ 135 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+.....++.+|+++.+........ +..+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-- 80 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVR-- 80 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEE--
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEe--
Confidence 45899999999999999999999999999999997654 35566788999999999999988876544332 333332
Q ss_pred CceEEEecCCCC--CCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCce-EEEEEcCCc--EEEcCEEEE
Q 022277 136 GRELRSFGFKDE--DASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGV-TILELVNGT--RIYANIVIG 208 (300)
Q Consensus 136 ~~~~~~~~~~~~--~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~-~~v~~~~g~--~~~ad~vV~ 208 (300)
+.....+++... ......+.+++..+.+.|.+.+ .|++++++++|++++.++++. +.+.+.+|+ +++||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 81 GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 233333444322 2234456799999999988776 489999999999999887653 456667887 699999999
Q ss_pred cCCCChHhhhhcCCCCCcc-ccceEEEEEeeCCCC-CCCC-CceEEEE---eCCeEEEEEEcCCCeEEEEEEEcC
Q 022277 209 CDGIRSPIAKWIGFSEPKY-VGHCAYRGLGYYPNG-QPFE-PKLNYIY---GRGVRAGYVPVSPTKVYWFICHNN 277 (300)
Q Consensus 209 A~G~~s~~r~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~ 277 (300)
|+|.+|.+++.+|...+.. ....++......... ..+. ....+.+ ..++++|++|.++++..+.+....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~ 235 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEP 235 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECH
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecH
Confidence 9999999999998765433 233333333332221 1121 2222333 367899999999998877776654
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.91 E-value=4.1e-22 Score=181.71 Aligned_cols=220 Identities=16% Similarity=0.125 Sum_probs=153.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHH-HHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGW-SVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+... .+++.+|+++.+................
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 45899999999999999999999999999999997543 234455666655 4889999998877655444333222211
Q ss_pred C---ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEE--EcCCc--EEEcCEE
Q 022277 136 G---RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILE--LVNGT--RIYANIV 206 (300)
Q Consensus 136 ~---~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~--~~~g~--~~~ad~v 206 (300)
. .....+...........+.+++..+.+.|.+.+ .|++++++++|+++..+++.+..|. ..+|+ +++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 1 111122222222334466789999999988776 5899999999999999887654444 44574 7999999
Q ss_pred EEcCCCChHhhhhcCCCC-CccccceEEEEEeeCCC--CCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022277 207 IGCDGIRSPIAKWIGFSE-PKYVGHCAYRGLGYYPN--GQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNN 277 (300)
Q Consensus 207 V~A~G~~s~~r~~~g~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (300)
|+|+|.+|.+|+.+|... ..+....++.+...... ..+........+.+++++|++|++++...+.+++..
T Consensus 165 I~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~ 238 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSR 238 (512)
T ss_dssp EECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEH
T ss_pred EECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecH
Confidence 999999999999997542 22334555555554322 223333344556678899999999998877666653
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.90 E-value=2.4e-22 Score=185.26 Aligned_cols=221 Identities=16% Similarity=0.190 Sum_probs=153.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhcccccc-ceEEEcC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIK-GMAVKSE 134 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~ 134 (300)
+..+||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+.+...++.+|+++.+........ ...+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 356899999999999999999999999999999997553 35567888999999999999988766543322 2222222
Q ss_pred CCceEEEecCCCCC----CCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc-CC--cEEEcCE
Q 022277 135 DGRELRSFGFKDED----ASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANI 205 (300)
Q Consensus 135 ~~~~~~~~~~~~~~----~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~ 205 (300)
.......+.+.... .....+.+++..+.+.|.+.+ .|++++++++|+++..+++.++.|.+. +| .++.||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~Adl 179 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDF 179 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCE
Confidence 22111122222111 223456789999999888776 589999999999999875555778887 66 4799999
Q ss_pred EEEcCCCChHhhhhcCCCCCcc-ccceEEEEEeeCC--CCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022277 206 VIGCDGIRSPIAKWIGFSEPKY-VGHCAYRGLGYYP--NGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNN 277 (300)
Q Consensus 206 vV~A~G~~s~~r~~~g~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (300)
||+|+|.+|.+++.+|...+.. ....++....... ...+..........+++++|++|++++.+.+.+....
T Consensus 180 VV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~ 254 (591)
T 3i3l_A 180 VIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDR 254 (591)
T ss_dssp EEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEG
T ss_pred EEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCH
Confidence 9999999999999998653321 1112222222211 1223333444556688899999999987776655544
No 19
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.90 E-value=1.7e-22 Score=188.55 Aligned_cols=219 Identities=18% Similarity=0.218 Sum_probs=155.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++||++|+.|++ .|++|+||||.+.+...+++..+.++++++++.+|+.+.+.........+.++...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 99999999999988888899999999999999999999888766666666666532
Q ss_pred ----CceEE--EecCCC-CCCCcceeeecHHHHHHHHHhcC--CCC--eEEeCCeEEEEEEcCC---ceEEEEEc-----
Q 022277 136 ----GRELR--SFGFKD-EDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN---GVTILELV----- 196 (300)
Q Consensus 136 ----~~~~~--~~~~~~-~~~~~~~~~i~~~~l~~~l~~~~--~g~--~i~~~~~v~~i~~~~~---~~~~v~~~----- 196 (300)
+.... .++... .........+.+..+.+.|.+.+ .|+ +|+++++|++++.+++ ..+.|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 33221 122111 11233456788999998888777 354 9999999999998763 13446654
Q ss_pred -CC--cEEEcCEEEEcCCCChHhhhhcCCCCCccccceEEEEEeeC--CCCCCCCCceEEEEeCCeEEEEEEcCCC-eEE
Q 022277 197 -NG--TRIYANIVIGCDGIRSPIAKWIGFSEPKYVGHCAYRGLGYY--PNGQPFEPKLNYIYGRGVRAGYVPVSPT-KVY 270 (300)
Q Consensus 197 -~g--~~~~ad~vV~A~G~~s~~r~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 270 (300)
+| ++++||+||+|||.+|.+|+.+|+..+.......| ++++. ....+.......+..++++++++|++++ .++
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r 269 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVR 269 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEE
Confidence 45 47999999999999999999998875544333222 22221 1111111122222237788899999988 555
Q ss_pred EEEEEc
Q 022277 271 WFICHN 276 (300)
Q Consensus 271 ~~~~~~ 276 (300)
+++.+.
T Consensus 270 ~~~~~~ 275 (639)
T 2dkh_A 270 FYVEMD 275 (639)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 20
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.90 E-value=3e-22 Score=177.52 Aligned_cols=180 Identities=21% Similarity=0.222 Sum_probs=132.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC--CCceeeEchhHHHHHHHcCCcHHHHhcc---c-cccceEEE
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRSQF---L-EIKGMAVK 132 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~--~g~~~~~~~~~~~~l~~~g~~~~~~~~~---~-~~~~~~~~ 132 (300)
.+|+||||||+||++|+.|+++|++|+||||.+.+.. .|.++.+.+++.+.|+++|+.+.+.... . ......+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 4799999999999999999999999999999987754 4778889999999999999887654321 1 11122333
Q ss_pred cCCCceEEEec----CCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEE
Q 022277 133 SEDGRELRSFG----FKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIG 208 (300)
Q Consensus 133 ~~~~~~~~~~~----~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~ 208 (300)
...+....... ............+.|..|.+.|.+.+ +..|+++++|++++..+++.+.|.+.||++++||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~-~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL-ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC-TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc-cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEE
Confidence 33333222111 11112234456789999999999887 45799999999999877765669999999999999999
Q ss_pred cCCCChHhhhhcCCC-CCccccceEEEEEeeC
Q 022277 209 CDGIRSPIAKWIGFS-EPKYVGHCAYRGLGYY 239 (300)
Q Consensus 209 A~G~~s~~r~~~g~~-~~~~~~~~~~~~~~~~ 239 (300)
|||.+|.+|+.++.. .+.+.++..+.+....
T Consensus 161 ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~ 192 (412)
T 4hb9_A 161 ADGSNSKVRKQYLPFIERFDVGVSMIIGRARL 192 (412)
T ss_dssp CCCTTCHHHHHHSTTCCCEEEEEEEEEEEEEC
T ss_pred CCCCCcchHHHhCCCccccccceeEEEEEEec
Confidence 999999999999554 4455567777666554
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.90 E-value=2.8e-22 Score=180.21 Aligned_cols=212 Identities=17% Similarity=0.140 Sum_probs=144.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC--CCceeeEchhHHHHHHHcCCcHHHHh-ccccccceEEEc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRS-QFLEIKGMAVKS 133 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~--~g~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~ 133 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+.. ...+..+ +.+.++.+++...... ......+..++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 358999999999999999999999999999999886432 1222333 4567788887653321 122233444444
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEE
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIV 206 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~v 206 (300)
+.+.....+ ....+.++|..+.+.|.+.+ .|++++++++|+++..+++++.+|.+. +|+ +++||+|
T Consensus 82 ~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~V 154 (453)
T 3atr_A 82 PDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVV 154 (453)
T ss_dssp TTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEE
T ss_pred CCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEE
Confidence 433221111 12346789999999988776 589999999999999887776556554 665 7999999
Q ss_pred EEcCCCChHhhhhcCCCCC----cc--ccceEEEEEeeCCCCCCCCCceEEEEe----CCeEEEEEEcCCCeEEEEEEEc
Q 022277 207 IGCDGIRSPIAKWIGFSEP----KY--VGHCAYRGLGYYPNGQPFEPKLNYIYG----RGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 207 V~A~G~~s~~r~~~g~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
|+|+|.+|.+++.++...| .+ ....+++..+........+....++++ +++++|++|.+++.+.+.+.+.
T Consensus 155 V~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~ 234 (453)
T 3atr_A 155 VEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQ 234 (453)
T ss_dssp EECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEE
T ss_pred EECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEec
Confidence 9999999999999986542 11 234566655554332212233334553 5788999999999887766665
Q ss_pred CC
Q 022277 277 NP 278 (300)
Q Consensus 277 ~~ 278 (300)
..
T Consensus 235 ~~ 236 (453)
T 3atr_A 235 GG 236 (453)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.84 E-value=8.1e-19 Score=160.47 Aligned_cols=217 Identities=15% Similarity=0.099 Sum_probs=142.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH------------cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHH--HHhc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR------------LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSD--LRSQ 122 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~------------~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~--~~~~ 122 (300)
..+||+|||||++|+++|..|++ .|++|+|||+.+.+. .+.+.++.+...++++.+|+.+. +...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 46899999999999999999999 899999999976543 34477888999999999999885 4443
Q ss_pred c-ccccceEEEcCCC-------ce-EEEec---------CC----------------------------------CC--C
Q 022277 123 F-LEIKGMAVKSEDG-------RE-LRSFG---------FK----------------------------------DE--D 148 (300)
Q Consensus 123 ~-~~~~~~~~~~~~~-------~~-~~~~~---------~~----------------------------------~~--~ 148 (300)
. ....++.+.+... .. ...+. +. .. .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 2 2223344432211 11 11111 00 00 0
Q ss_pred CCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCc-eEEEEEcCCcEEEcCEEEEcCCCChHh-hhhcCCC
Q 022277 149 ASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPI-AKWIGFS 223 (300)
Q Consensus 149 ~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~s~~-r~~~g~~ 223 (300)
.....+.+++..+.+.|.+.+ .|++++++ +|++++.++++ ++.|.+.+|.+++||+||+|+|.+|.+ ++.+|..
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 112345789999988887665 48999999 69999887554 456888887789999999999999988 6667765
Q ss_pred CCccc----cceEEEEEeeCCCC-CCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022277 224 EPKYV----GHCAYRGLGYYPNG-QPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 224 ~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
...+. ...++...++.... .+..........+.++.|++|++++ ..+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~-~~~~~v~~ 300 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTR-KGVGYVYS 300 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSE-EEEEEEEC
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCc-eEEEEEec
Confidence 42221 22233333343321 1122222334557788899999885 43344443
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.82 E-value=1.8e-18 Score=157.79 Aligned_cols=216 Identities=15% Similarity=0.099 Sum_probs=135.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHH--HHhccccc-cceEE
Q 022277 58 KEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSD--LRSQFLEI-KGMAV 131 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~-~~~~~ 131 (300)
.+||+|||||++|+++|+.|++ .|++|+|||+.+.+ ..+.+..+.+....+++.+|+.+. +....... .++.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 4799999999999999999999 99999999998643 345566778888889999999875 33322111 12222
Q ss_pred EcCC--Cc-eEEEec---------C-----------------------------------CCCC----C-----------
Q 022277 132 KSED--GR-ELRSFG---------F-----------------------------------KDED----A----------- 149 (300)
Q Consensus 132 ~~~~--~~-~~~~~~---------~-----------------------------------~~~~----~----------- 149 (300)
.+.. +. ....+. + .... .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 2111 00 000000 0 0000 0
Q ss_pred ---CcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCc-eEEEEEcCCcEEEcCEEEEcCCCChHhhh-hcCC
Q 022277 150 ---SQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPIAK-WIGF 222 (300)
Q Consensus 150 ---~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~s~~r~-~~g~ 222 (300)
....+.+++..+.+.|.+.+ .|++++++ +|++++.++++ ++.|.+.+|++++||+||+|+|.+|.+++ .+|.
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCC
Confidence 23346789999999988776 58999999 99999886544 46688888888999999999999998854 4576
Q ss_pred CCCc----cccceEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022277 223 SEPK----YVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 223 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
.... .....++...++................++++.|++|+++ +..+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~ 296 (511)
T 2weu_A 240 RFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYS 296 (511)
T ss_dssp CEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEEC
T ss_pred CCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEEC
Confidence 4321 1122223222333221112222334456778999999988 455444554
No 24
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.81 E-value=4.3e-18 Score=156.11 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=138.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCceeeEchhHHH-HHHHcCCcHH--HHhccccc-cce
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWS-VLDALGVGSD--LRSQFLEI-KGM 129 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~~~~~~~~~-~l~~~g~~~~--~~~~~~~~-~~~ 129 (300)
..+||+|||||++|+++|+.|++ .|++|+|||+.... ..+.+.++.+.... +++.+|+.+. +....... .++
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~-~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~ 82 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP-RIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAI 82 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC-CCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC-CcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCc
Confidence 46899999999999999999999 99999999996643 34446777888888 9999998764 32221111 122
Q ss_pred EEEcCC-------Cce-EEEec---------C------------C-C-----------------------CCCCcceeee
Q 022277 130 AVKSED-------GRE-LRSFG---------F------------K-D-----------------------EDASQEVRAV 156 (300)
Q Consensus 130 ~~~~~~-------~~~-~~~~~---------~------------~-~-----------------------~~~~~~~~~i 156 (300)
.+.... +.. ..... + . . .......+.+
T Consensus 83 ~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i 162 (538)
T 2aqj_A 83 KFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHF 162 (538)
T ss_dssp EEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEE
T ss_pred cccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEE
Confidence 222111 000 00000 0 0 0 0001234678
Q ss_pred cHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCc-eEEEEEcCCcEEEcCEEEEcCCCChHhhh-hcCCCCCccc----
Q 022277 157 ERRILLETLANQL--PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPIAK-WIGFSEPKYV---- 228 (300)
Q Consensus 157 ~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~s~~r~-~~g~~~~~~~---- 228 (300)
++..+.+.|.+.+ .|++++++ +|+++..++++ ++.|.+.+|++++||+||+|+|.+|.++. .+|.....+.
T Consensus 163 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~ 241 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLL 241 (538)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCC
T ss_pred eHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccc
Confidence 8999999988776 58999999 89999886554 45688888888999999999999998854 4465432222
Q ss_pred cceEEEEEeeCCCCC-CCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022277 229 GHCAYRGLGYYPNGQ-PFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 229 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
...++...++..... ...........++++.|++|++++ ..+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~ 289 (538)
T 2aqj_A 242 CDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFS 289 (538)
T ss_dssp CCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEEC
T ss_pred cceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEc
Confidence 122333223322110 012222334567788999999885 44444443
No 25
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.81 E-value=1.1e-17 Score=154.38 Aligned_cols=214 Identities=16% Similarity=0.126 Sum_probs=133.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCcCCC-CceeeEchhHHHHHHHcCCcHHHHhccccc---
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL------GIGSLVIEQADSLRTG-GTSLTLFKNGWSVLDALGVGSDLRSQFLEI--- 126 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~------G~~V~viE~~~~~~~~-g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~--- 126 (300)
+.+||+|||||++||++|+.|++. |++|+||||.+.++.. ..+..+.+++++.+ ++- +.....+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~---~~~~g~~~~~~ 108 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPD---WKEKGAPLNTP 108 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTT---HHHHTCCCCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHH---HHhcCCceeee
Confidence 468999999999999999999999 9999999999876532 33455777766654 221 21111111
Q ss_pred ---cceEEEcCCCceEEEecC-CC-CCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCC-ceEEEEEc--
Q 022277 127 ---KGMAVKSEDGRELRSFGF-KD-EDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGN-GVTILELV-- 196 (300)
Q Consensus 127 ---~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~-~~~~v~~~-- 196 (300)
..+.+....+. ..++. .. .......+.+.+..+.+.|.+.+ .|++|+++++|+++..+++ .+++|.+.
T Consensus 109 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 109 VTEDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp CCEEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCE
T ss_pred echhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 12333332221 11221 11 11123356788999999988776 4899999999999998765 45567765
Q ss_pred ----CC---------cEEEcCEEEEcCCCChHhhhhc----CCCCC---ccccceEEEEEeeCCCCCCCCCceEEEEe--
Q 022277 197 ----NG---------TRIYANIVIGCDGIRSPIAKWI----GFSEP---KYVGHCAYRGLGYYPNGQPFEPKLNYIYG-- 254 (300)
Q Consensus 197 ----~g---------~~~~ad~vV~A~G~~s~~r~~~----g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (300)
+| .++.||+||+|+|.+|.+|+.+ |+... ...+. .+......+...........+++
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~-g~~~~~~v~~~~~~~~~~~~~~g~~ 265 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI-GLKELWVIDEKKWKPGRVDHTVGWP 265 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE-EEEEEEECCGGGCCTTEEEEEEETT
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh-hhhhheecCcccccCCeEEEEEecc
Confidence 33 5799999999999999998876 55432 22222 22222333322222333333332
Q ss_pred ----CCeEEEEEEcC--CCeEEEEEEEcCC
Q 022277 255 ----RGVRAGYVPVS--PTKVYWFICHNNP 278 (300)
Q Consensus 255 ----~~~~~~~~p~~--~~~~~~~~~~~~~ 278 (300)
..+..+++|.+ ++.+.+.+....+
T Consensus 266 ~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~ 295 (584)
T 2gmh_A 266 LDRHTYGGSFLYHLNEGEPLLALGFVVGLD 295 (584)
T ss_dssp SCTTSCEEEEEEECCSSSCEEEEEEEEETT
T ss_pred ccCCcCCceEEEEecCCCCeEEEEEEEecC
Confidence 12345678888 7877777666544
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.80 E-value=7.5e-18 Score=154.81 Aligned_cols=217 Identities=16% Similarity=0.158 Sum_probs=139.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCceeeEchhHHH-HHHHcCCcHH--HHhccccc-cce
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWS-VLDALGVGSD--LRSQFLEI-KGM 129 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~~~~~~~~~-~l~~~g~~~~--~~~~~~~~-~~~ 129 (300)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+. .+.+..+.+.... +++.+|+.+. +....... .++
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 46899999999999999999999 999999999976543 3446778888888 9999999865 44322211 223
Q ss_pred EEEcCCCc---------------e-EEEecC----------------------C-C---C-----------------C--
Q 022277 130 AVKSEDGR---------------E-LRSFGF----------------------K-D---E-----------------D-- 148 (300)
Q Consensus 130 ~~~~~~~~---------------~-~~~~~~----------------------~-~---~-----------------~-- 148 (300)
.+...... . ...+.. . . . .
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 22221111 0 011100 0 0 0 0
Q ss_pred -CCcceeeecHHHHHHHHHhcC--C-CCeEEeCCeEEEEEEcCCc-eEEEEEcCCcEEEcCEEEEcCCCChHh-hhhcCC
Q 022277 149 -ASQEVRAVERRILLETLANQL--P-PESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPI-AKWIGF 222 (300)
Q Consensus 149 -~~~~~~~i~~~~l~~~l~~~~--~-g~~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~s~~-r~~~g~ 222 (300)
.....+.+++..+.+.|.+.+ . |++++++ +|++++.++++ ++.|.+.+|+++.||+||+|+|.+|.+ ++.+|.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCC
Confidence 122345689999999998877 3 8999999 99999886543 466888888889999999999999988 555676
Q ss_pred CCCccc----cceEEEEEeeCCCCC-CCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022277 223 SEPKYV----GHCAYRGLGYYPNGQ-PFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 223 ~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
....+. ...++...++..... ...........++++.|++|+++ ...+.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~-~~~~g~v~~ 319 (550)
T 2e4g_A 262 PFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLG-RFGTGYVYS 319 (550)
T ss_dssp CEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSS-EEEEEEEEC
T ss_pred CcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCC-ccceEEEEe
Confidence 432221 112222222322110 01222233445778889999987 444444443
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.77 E-value=1.2e-18 Score=153.20 Aligned_cols=193 Identities=15% Similarity=0.058 Sum_probs=126.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCc-HH-HHhccccccceEEEcC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVG-SD-LRSQFLEIKGMAVKSE 134 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~-~~-~~~~~~~~~~~~~~~~ 134 (300)
.||+|||||++|+++|+.|+++ |++|+|+||.+.+...|.+..+.+++.+.+...++. +. +.........+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 999999999988777788888888776522222232 22 333333334445544
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
.+..+. ...+..+..+.+..+.+.|.+.+ .|++++++++|++++.. .+++||+||+|||.
T Consensus 80 ~g~~~~------~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~ 141 (381)
T 3c4a_A 80 HNEPSL------MSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGV 141 (381)
T ss_dssp SSSEEE------CCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGG
T ss_pred CCeeEE------ecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCC
Confidence 343321 11123456789999999998877 48999999999887532 12579999999999
Q ss_pred ChHhhhhc----CCCCCccccceEEEEEeeCCCCCCCCCceEEEEeCCeEE--EEEEcCCCeEEEEEEE
Q 022277 213 RSPIAKWI----GFSEPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRA--GYVPVSPTKVYWFICH 275 (300)
Q Consensus 213 ~s~~r~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~ 275 (300)
+|. |+.+ |...+.+.++..|.+..... ... ...+.....++. .++|++++...+++..
T Consensus 142 ~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~ 205 (381)
T 3c4a_A 142 NHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--DQM--NLVFRTHGKDIFIAHAYKYSDTMSTFIVEC 205 (381)
T ss_dssp GGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--SSE--EEEEEEETTEEEEEEEEECSSSCEEEEEEE
T ss_pred Cch-HHhhhhhcCCCcccCCccEEEEecCCCC--Ccc--eeeEeeCCCcEEEEEEEEecCCeEEEEEEC
Confidence 999 9887 44433334556666543221 111 111112244443 3699998876544443
No 28
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.69 E-value=1.2e-16 Score=144.90 Aligned_cols=141 Identities=18% Similarity=0.184 Sum_probs=105.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
...+||+|||||++|+++|+.|++.|++|+|||+.+.++ ......+.+.+.+.++.+|+++....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g-~~~~~~~~~~~~~~l~~~g~~~~~~~-------------- 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS-RHNVLHLWPFTIHDLRALGAKKFYGR-------------- 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC-CCCEEECCHHHHHHHHTTTHHHHCTT--------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC-CCCcccCChhHHHHHHHcCCcccccc--------------
Confidence 356899999999999999999999999999999998764 23556677888888888876532110
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcC--CceEEEEE--c-CC--cEEEcCEE
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILEL--V-NG--TRIYANIV 206 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~--~~~~~v~~--~-~g--~~~~ad~v 206 (300)
+ .......+.+..+.+.|.+.+ .|++|+++++|++++.++ +..+.|.+ . +| .++.||+|
T Consensus 155 --------~----~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~V 222 (497)
T 2bry_A 155 --------F----CTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVL 222 (497)
T ss_dssp --------T----TCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEE
T ss_pred --------c----cccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEE
Confidence 0 011123466777777776655 589999999999998752 23355766 3 55 46999999
Q ss_pred EEcCCCChHhhhhcCCC
Q 022277 207 IGCDGIRSPIAKWIGFS 223 (300)
Q Consensus 207 V~A~G~~s~~r~~~g~~ 223 (300)
|+|+|.+|.+|+..+..
T Consensus 223 V~A~G~~S~~r~~~~~~ 239 (497)
T 2bry_A 223 ISAAGGKFVPEGFTIRE 239 (497)
T ss_dssp EECCCTTCCCTTCEEEE
T ss_pred EECCCCCcccccccchh
Confidence 99999999998766543
No 29
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.68 E-value=1.2e-15 Score=134.77 Aligned_cols=116 Identities=12% Similarity=0.026 Sum_probs=78.0
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-HhhhhcCCCCCccccce
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFSEPKYVGHC 231 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s-~~r~~~g~~~~~~~~~~ 231 (300)
.++...+.+.|.+.+ .|++++++++|+++..++++++.|.+.+| ++.||.||+|+|.++ .+++.+|+..|......
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~ 248 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPL 248 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccce
Confidence 345667777776655 48999999999999988777777888888 699999999999998 67777887665543222
Q ss_pred EEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022277 232 AYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (300)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (300)
.+...-+... ... .+++......++.|..++++.+.....
T Consensus 249 ~~~~~~~~~~--~~~---~~~~~~~~~~y~~p~~~g~~~ig~~~~ 288 (405)
T 2gag_B 249 QALVSELFEP--VHP---TVVMSNHIHVYVSQAHKGELVMGAGID 288 (405)
T ss_dssp EEEEEEEBCS--CCC---SEEEETTTTEEEEECTTSEEEEEEEEC
T ss_pred eEEEecCCcc--ccC---ceEEeCCCcEEEEEcCCCcEEEEeccC
Confidence 2221111111 111 123334445667898888887665554
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.67 E-value=1.7e-15 Score=130.57 Aligned_cols=149 Identities=15% Similarity=0.104 Sum_probs=88.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCcee-------e-----Ec---hhHHHHHHHcCCcHHHHhc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSL-------T-----LF---KNGWSVLDALGVGSDLRSQ 122 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~-------~-----~~---~~~~~~l~~~g~~~~~~~~ 122 (300)
.+||+|||||++|+++|+.|++.|++|+|+||.+.++...... . +. +...+.++.+. .. ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQ---AQ-GH 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHH---HH-TS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHH---hC-CC
Confidence 4799999999999999999999999999999998653211111 0 11 11222222211 00 00
Q ss_pred ccccc-ceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEE
Q 022277 123 FLEIK-GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRI 201 (300)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~ 201 (300)
..... .+.... .+. +..................+.+.|.+ +++|+++++|++++.++++ +.|++.+|+.+
T Consensus 78 ~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~ 148 (336)
T 1yvv_A 78 VAEWTPLLYNFH-AGR----LSPSPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEH-WNLLDAEGQNH 148 (336)
T ss_dssp EEEECCCEEEES-SSB----CCCCCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSC-EEEEETTSCEE
T ss_pred eeeccccceecc-Ccc----cccCCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCE-EEEEeCCCcCc
Confidence 00000 011111 110 00000000111111233455565554 6799999999999988877 55889888766
Q ss_pred E-cCEEEEcCCCChHhhhh
Q 022277 202 Y-ANIVIGCDGIRSPIAKW 219 (300)
Q Consensus 202 ~-ad~vV~A~G~~s~~r~~ 219 (300)
. +|+||+|+|..+..+..
T Consensus 149 ~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 149 GPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp EEESEEEECSCHHHHGGGG
T ss_pred cccCEEEEcCCHHHHHHhh
Confidence 4 99999999999887754
No 31
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.65 E-value=1e-14 Score=127.08 Aligned_cols=69 Identities=16% Similarity=0.273 Sum_probs=57.2
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCC--cEEEcCEEEEcCCCCh-Hhhhhc-CCC
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRS-PIAKWI-GFS 223 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~s-~~r~~~-g~~ 223 (300)
.++...+.+.|.+.+ .|++|+++++|++++.++++.+.|.+.+| .++.||.||+|+|.+| .+.+.+ |++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 467778888887766 58999999999999988776566888888 3799999999999998 577777 765
No 32
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.4e-15 Score=134.67 Aligned_cols=151 Identities=21% Similarity=0.320 Sum_probs=94.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC-----CCceeeEch--------------hHHHHHHHcCCc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT-----GGTSLTLFK--------------NGWSVLDALGVG 116 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~-----~g~~~~~~~--------------~~~~~l~~~g~~ 116 (300)
+..+||+|||||++|+++|+.|+++|++|+|+|+.+.++. ++..+.+.. .....+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 3568999999999999999999999999999999987642 111111110 011222222211
Q ss_pred HHHHhccccccceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEE
Q 022277 117 SDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILE 194 (300)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~ 194 (300)
+.+ . .....++.+.... .+..+.......+.+.|.+.+ .|++|+++++|+++..++++ +.|.
T Consensus 105 ~~~-~-~~~~~Gi~~~~~~-------------~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~ 168 (417)
T 3v76_A 105 DFV-A-LVERHGIGWHEKT-------------LGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVT 168 (417)
T ss_dssp HHH-H-HHHHTTCCEEECS-------------TTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEE
T ss_pred HHH-H-HHHHcCCCcEEee-------------CCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEE
Confidence 111 0 0001111111111 111122244556777776655 38999999999999988776 6688
Q ss_pred EcCCcEEEcCEEEEcCCCCh-----------HhhhhcCCC
Q 022277 195 LVNGTRIYANIVIGCDGIRS-----------PIAKWIGFS 223 (300)
Q Consensus 195 ~~~g~~~~ad~vV~A~G~~s-----------~~r~~~g~~ 223 (300)
+.+| ++.||.||+|+|.+| .+.+.+|..
T Consensus 169 ~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 169 TSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp ETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred ECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 8888 899999999999998 356666655
No 33
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.63 E-value=4.8e-15 Score=124.82 Aligned_cols=135 Identities=24% Similarity=0.302 Sum_probs=90.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCCCCc-------eeeEchhHHHHHHHcCCcHHHHhcccccc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLRTGGT-------SLTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~~~~~~g~-------~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 127 (300)
...+||+|||||++|+++|+.|++. |++|+|+|+.+.++.... ...+.....++++.+|+....
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~-------- 108 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDE-------- 108 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEE--------
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCccc--------
Confidence 3568999999999999999999997 999999999987642110 112223334555554432100
Q ss_pred ceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEc--------
Q 022277 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELV-------- 196 (300)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~-------- 196 (300)
.+ ......+...+...|.+.+ .|++++++++|+++..+++.+..|.+.
T Consensus 109 -------~~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~ 167 (284)
T 1rp0_A 109 -------QD--------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNH 167 (284)
T ss_dssp -------CS--------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCT
T ss_pred -------CC--------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEecccccccc
Confidence 00 0011124455555555443 489999999999999887765556553
Q ss_pred -CC-----cEEEcCEEEEcCCCChHhhhh
Q 022277 197 -NG-----TRIYANIVIGCDGIRSPIAKW 219 (300)
Q Consensus 197 -~g-----~~~~ad~vV~A~G~~s~~r~~ 219 (300)
+| ..+.||.||+|+|..|.++..
T Consensus 168 ~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 168 HTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp TTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CccccCceEEEECCEEEECCCCchHHHHH
Confidence 22 479999999999988876543
No 34
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=6.4e-15 Score=129.01 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=56.7
Q ss_pred eeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-HhhhhcCCC
Q 022277 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFS 223 (300)
Q Consensus 154 ~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s-~~r~~~g~~ 223 (300)
..++...+.+.|.+.+ .|++|+++++|++++.++++ +.|.+.+| ++.||.||+|+|.+| .+.+.+|..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3467788888887766 48999999999999988776 66888887 799999999999998 567777765
No 35
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.63 E-value=4.4e-15 Score=133.04 Aligned_cols=162 Identities=17% Similarity=0.219 Sum_probs=96.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC------CCceeeEchh-HHHHHHHcCCcHHHHh----cccc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLFKN-GWSVLDALGVGSDLRS----QFLE 125 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~------~g~~~~~~~~-~~~~l~~~g~~~~~~~----~~~~ 125 (300)
+.+||+|||||++|+++|+.|+++|.+|+|+|+.+.++. ++........ ...+++.++....+.. ....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 568999999999999999999999999999999886531 1111101000 1122222221111000 0000
Q ss_pred ccceEEEcCCCceEEEecCCCCCCCccee-eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEE
Q 022277 126 IKGMAVKSEDGRELRSFGFKDEDASQEVR-AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIY 202 (300)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 202 (300)
...+.+....|...... ..+..+. ......+.+.|.+.+ .|++|+++++|+++..++++++.|.+.+|+++.
T Consensus 105 ~~~~~~~~~~G~~~~~~-----~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~ 179 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEE-----DHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLE 179 (447)
T ss_dssp HHHHHHHHHTTCCEEEC-----GGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEE
T ss_pred HHHHHHHHhcCCceEEe-----eCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEE
Confidence 00000000001000000 0000000 012356666666555 489999999999999877776789999887799
Q ss_pred cCEEEEcCCCCh-----------HhhhhcCCC
Q 022277 203 ANIVIGCDGIRS-----------PIAKWIGFS 223 (300)
Q Consensus 203 ad~vV~A~G~~s-----------~~r~~~g~~ 223 (300)
||.||+|+|.+| .+++.+|..
T Consensus 180 Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 180 TNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp CSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred CCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 999999999999 778888765
No 36
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.63 E-value=3.9e-15 Score=130.62 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=57.5
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-HhhhhcCCC--CCcc
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFS--EPKY 227 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s-~~r~~~g~~--~~~~ 227 (300)
.++...+.+.|.+.+ .|++++++++|++++.+++++.+|.+.+| ++.||.||+|+|.+| .+.+.+|.. .|..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~ 221 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIE 221 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCE
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCC
Confidence 466778877777666 48999999999999988777555888877 799999999999998 567777765 4543
No 37
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.62 E-value=7.6e-15 Score=134.87 Aligned_cols=69 Identities=10% Similarity=0.005 Sum_probs=56.2
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcC---C--cEEEcCEEEEcCCCCh-HhhhhcCCC
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVN---G--TRIYANIVIGCDGIRS-PIAKWIGFS 223 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~vV~A~G~~s-~~r~~~g~~ 223 (300)
.++...+...|.+.+ .|++|+++++|+++..+++++++|.+.+ | ..+.||.||+|+|.++ .+++.+|..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 566778888777666 5999999999999999888877787764 3 3799999999999998 567777764
No 38
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.62 E-value=8.3e-15 Score=133.33 Aligned_cols=141 Identities=16% Similarity=0.298 Sum_probs=92.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC------------------------CCcee----------e--
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------------------------GGTSL----------T-- 101 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~------------------------~g~~~----------~-- 101 (300)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.+.. +|.+. .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 47999999999999999999999999999999875410 00000 0
Q ss_pred --EchhHHHHHHHcCCcHHHHhccccccceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeC
Q 022277 102 --LFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFS 177 (300)
Q Consensus 102 --~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~ 177 (300)
......+.+...|....+... . ...........+.+.|.+.+ .|++|+++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~-------------------------~-~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~ 240 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYV-------------------------S-KPHIGTFKLVTMIEKMRATIIELGGEIRFS 240 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTB-------------------------S-SCCCCHHHHHHHHHHHHHHHHHTTCEEESS
T ss_pred cccHHHHHHHHHHcCCCceEeec-------------------------c-ccccccchHHHHHHHHHHHHHhcCCEEEeC
Confidence 001111222222222111000 0 01111123445666665544 48999999
Q ss_pred CeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH----hhhhcCCCC
Q 022277 178 SELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP----IAKWIGFSE 224 (300)
Q Consensus 178 ~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~----~r~~~g~~~ 224 (300)
++|+++..++++++.|.+.+|+++.||.||+|+|+++. ..+..|+..
T Consensus 241 t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 241 TRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp CCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred CEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 99999998888777899999989999999999999984 444556653
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.62 E-value=1.4e-14 Score=136.23 Aligned_cols=210 Identities=12% Similarity=0.068 Sum_probs=115.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCC--c-eeeEch------------------hHHHHHHHcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGG--T-SLTLFK------------------NGWSVLDALGV 115 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g--~-~~~~~~------------------~~~~~l~~~g~ 115 (300)
..+||+|||||++|+++|+.|+++|++|+|+|++..++.+. . +-.+.+ .+.++++.++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 34899999999999999999999999999999986654211 1 111111 12233333332
Q ss_pred cHHHHh---------------------ccccccceEEEcCCCceEEEecCCCC---CCCcceeeecHHHHHHHHHhcC--
Q 022277 116 GSDLRS---------------------QFLEIKGMAVKSEDGRELRSFGFKDE---DASQEVRAVERRILLETLANQL-- 169 (300)
Q Consensus 116 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~l~~~l~~~~-- 169 (300)
...... ...+...+.+.+.... ....+.... ........++...+.+.|.+.+
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~-~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAV-EQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQ 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHH-HHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHH-HHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHh
Confidence 100000 0000000001100000 000000000 0011233467778888887766
Q ss_pred CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-hhhhcCCCCCccccceEEEEEeeCCCCCCCCCc
Q 022277 170 PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKYVGHCAYRGLGYYPNGQPFEPK 248 (300)
Q Consensus 170 ~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~-~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (300)
.|++|+++++|+++..++++ +.|.+.+|.++.||.||+|+|.+|. +.+..+++.....|+... ++...... ...
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rGq~~~---~~~~~~~~-~l~ 504 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDC-WLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSH---IPTTPELA-ELK 504 (676)
T ss_dssp TTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCGGGGGCSTTTTTCSCEEEEEEEEE---EECCTTGG-GCC
T ss_pred CCCEEEeCCeeeEEEEeCCe-EEEEECCCCEEECCEEEECCCcchhccccccCCcceeecCEEEE---ECCCcccc-cCC
Confidence 48999999999999998877 5688888888999999999999985 444444433333344322 23221111 111
Q ss_pred eEEEEeCCeEEEEEEcC--CCeEEEEEEEc
Q 022277 249 LNYIYGRGVRAGYVPVS--PTKVYWFICHN 276 (300)
Q Consensus 249 ~~~~~~~~~~~~~~p~~--~~~~~~~~~~~ 276 (300)
..+. .+ .++.|.. ++.+.+...+.
T Consensus 505 -~~l~-~~--~Yl~P~~~~~g~~~iG~t~~ 530 (676)
T 3ps9_A 505 -QVLC-YD--GYLTPQNPANQHHCIGASYH 530 (676)
T ss_dssp -SEEE-SS--SEECCCBTTTTEEEEECCCE
T ss_pred -ceeE-CC--eeeccccCCCCeEEEeeccC
Confidence 1222 23 3467877 67666554443
No 40
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.62 E-value=2.4e-14 Score=126.32 Aligned_cols=71 Identities=13% Similarity=0.118 Sum_probs=55.4
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-HhhhhcCCCCCcc
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFSEPKY 227 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s-~~r~~~g~~~~~~ 227 (300)
.++...+.+.|.+.+ .|++|+++++|++++.++++ +.|.+.+| ++.||.||+|+|.++ .+.+.+|...|..
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p~~ 222 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADG-VSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLAYS 222 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTE-EEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCCEE
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCe-EEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCCee
Confidence 456677777777655 48999999999999988776 44777666 799999999999995 5777777655533
No 41
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.61 E-value=1e-14 Score=124.44 Aligned_cols=132 Identities=23% Similarity=0.330 Sum_probs=88.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCC-------ceeeEchhHHHHHHHcCCcHHHHhcccccc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGG-------TSLTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g-------~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 127 (300)
..+||+|||||++|+++|+.|+++ |++|+|+|+...++.+. ....+.+...++++.+|+....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~-------- 149 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYED-------- 149 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEE--------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccc--------
Confidence 468999999999999999999997 99999999998764211 1122334556666666653110
Q ss_pred ceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCC----------------
Q 022277 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGN---------------- 188 (300)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~---------------- 188 (300)
.+. .....+..++.+.|.+.+ ++++++++++|+++..+++
T Consensus 150 -------~G~--------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~ 208 (344)
T 3jsk_A 150 -------EGD--------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE 208 (344)
T ss_dssp -------CSS--------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------
T ss_pred -------cCC--------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC
Confidence 000 011112345555555544 4899999999999987652
Q ss_pred ---ceEEEEEc--------------CCcEEEcCEEEEcCCCChHhh
Q 022277 189 ---GVTILELV--------------NGTRIYANIVIGCDGIRSPIA 217 (300)
Q Consensus 189 ---~~~~v~~~--------------~g~~~~ad~vV~A~G~~s~~r 217 (300)
.+.+|.+. +..+++|++||+|||..+.++
T Consensus 209 g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~ 254 (344)
T 3jsk_A 209 AKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFG 254 (344)
T ss_dssp CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSS
T ss_pred CCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhh
Confidence 44455542 224799999999999998843
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.61 E-value=1.7e-14 Score=126.73 Aligned_cols=211 Identities=13% Similarity=0.091 Sum_probs=113.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCce---eeE-c----h--hHHHH-HHHcCCcHHHHhcc--
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTS---LTL-F----K--NGWSV-LDALGVGSDLRSQF-- 123 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~---~~~-~----~--~~~~~-l~~~g~~~~~~~~~-- 123 (300)
+.+||+|||||++|+++|+.|+++|++|+|+|+.......+.+ ..+ . . ...+. .+.+.++..+....
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 3589999999999999999999999999999998754311111 111 0 0 11111 11112222222110
Q ss_pred --ccccceEEEcCC----------------CceEEEecC-------CCCC-C-------CcceeeecHHHHHHHHHhcC-
Q 022277 124 --LEIKGMAVKSED----------------GRELRSFGF-------KDED-A-------SQEVRAVERRILLETLANQL- 169 (300)
Q Consensus 124 --~~~~~~~~~~~~----------------~~~~~~~~~-------~~~~-~-------~~~~~~i~~~~l~~~l~~~~- 169 (300)
....+....... +.....+.. +... . ......+++..+.+.|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 011111111100 000000000 0000 0 01123456678888887766
Q ss_pred -CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-hhhhcCCCCCcc--ccceEEEEEeeCCCC-C-
Q 022277 170 -PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKY--VGHCAYRGLGYYPNG-Q- 243 (300)
Q Consensus 170 -~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~-~r~~~g~~~~~~--~~~~~~~~~~~~~~~-~- 243 (300)
.|++++++++|++++.++++ +.|.+.+| ++.||.||+|+|.++. +.+.++...|.. .++..+ .+.... .
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~~pl~~~rg~~~~---~~~~~~~~~ 236 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDISPDS-VKIETANG-SYTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGF---FESDESKYS 236 (389)
T ss_dssp HTTCEEECSCCEEEEEECSSC-EEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEECCCEEEEEEEEE---ECCCHHHHB
T ss_pred HCCCEEEcCcEEEEEEecCCe-EEEEeCCC-EEEeCEEEEecCccHHHHhhhhccCCceEEEEEEEEE---EecCccccc
Confidence 48999999999999987776 55777766 7999999999999974 555666333322 233221 222210 0
Q ss_pred C-CCCceEEEEeCCeEEEEEEcCCC-eEEEE
Q 022277 244 P-FEPKLNYIYGRGVRAGYVPVSPT-KVYWF 272 (300)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~p~~~~-~~~~~ 272 (300)
. ......+........+++|..++ .+.+.
T Consensus 237 ~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG 267 (389)
T 2gf3_A 237 NDIDFPGFMVEVPNGIYYGFPSFGGCGLKLG 267 (389)
T ss_dssp GGGTCCEEEEEETTEEEEEECBSTTCCEEEE
T ss_pred ccccCCEEEEeCCCCcEEEcCCCCCCcEEEE
Confidence 0 01112222334446778898887 66543
No 43
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.60 E-value=1.4e-14 Score=129.55 Aligned_cols=62 Identities=15% Similarity=0.053 Sum_probs=52.9
Q ss_pred eeecHHHHHHHHHhcC--CCCeEEeCC---eEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 154 RAVERRILLETLANQL--PPESVQFSS---ELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 154 ~~i~~~~l~~~l~~~~--~g~~i~~~~---~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
..++...+.+.|.+.+ .|++|++++ +|+++..+++++.+|.+.+|+++.||.||+|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 4456677888887766 589999999 9999998887766799999988999999999999985
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.60 E-value=1.1e-14 Score=127.73 Aligned_cols=110 Identities=15% Similarity=0.180 Sum_probs=72.1
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-hhhhcCCCCCccccce
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKYVGHC 231 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~-~r~~~g~~~~~~~~~~ 231 (300)
.+++..+.+.|.+.+ .|++++++++|++++.+++++ .|.+.+| ++.||.||+|+|.++. +.+.++...+......
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g 237 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKG 237 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccce
Confidence 456677888777766 489999999999999877764 6888777 7999999999999986 7777776544332221
Q ss_pred EEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEE
Q 022277 232 AYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFI 273 (300)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 273 (300)
.. ...+.... .... .++.+ ..+++|..++.+.+..
T Consensus 238 ~~-~~~~~~~~-~~~~---~~~~~--~~~~~p~~~g~~~vG~ 272 (382)
T 1ryi_A 238 EC-LSVWNDDI-PLTK---TLYHD--HCYIVPRKSGRLVVGA 272 (382)
T ss_dssp EE-EEEECCSS-CCCS---EEEET--TEEEEECTTSEEEEEC
T ss_pred EE-EEECCCCC-Cccc---eEEcC--CEEEEEcCCCeEEEee
Confidence 11 12222211 1111 23344 3557898887665443
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.60 E-value=2.7e-14 Score=134.52 Aligned_cols=114 Identities=11% Similarity=-0.033 Sum_probs=72.4
Q ss_pred eeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCc-EEEcCEEEEcCCCChH-hhhhcCCCCCcccc
Q 022277 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT-RIYANIVIGCDGIRSP-IAKWIGFSEPKYVG 229 (300)
Q Consensus 154 ~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ad~vV~A~G~~s~-~r~~~g~~~~~~~~ 229 (300)
..++...+.+.|.+.+ .|++|+++++|++++.++++ +.|.+.+|. ++.||.||+|+|.++. +.+.++++.....|
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rG 485 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPLSAVRG 485 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSCCEEEEE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcchhccccccCCccccccC
Confidence 3467778888887766 58999999999999998877 568888887 7999999999999975 44444443333334
Q ss_pred ceEEEEEeeCCCCCCCCCceEEEEeCCeEEEEEEcC--CCeEEEEEEEc
Q 022277 230 HCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVS--PTKVYWFICHN 276 (300)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~ 276 (300)
+... ++..... .....++.. + .++.|.. ++.+.+...+.
T Consensus 486 q~~~---~~~~~~~--~~l~~v~~~-~--~Yl~P~~~~~g~~~iGat~~ 526 (689)
T 3pvc_A 486 QVSH---IPTTPVL--SQLQQVLCY-D--GYLTPVNPANQHHCIGASYQ 526 (689)
T ss_dssp EEEE---EECCTTG--GGCCSEEES-S--SEECCCBTTTTEEEEECCCE
T ss_pred cEEE---ECCCCcc--ccCCeeEeC-C--ceEccccCCCCeEEEEEecc
Confidence 4322 2322211 111122222 3 3567887 67665554443
No 46
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.58 E-value=2.5e-14 Score=112.15 Aligned_cols=116 Identities=22% Similarity=0.295 Sum_probs=84.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCce
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (300)
+||+|||||++|+++|..|++.|.+|+|+|+.+....... . +
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~--~-------------~----------------------- 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS--R-------------V----------------------- 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS--C-------------C-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch--h-------------h-----------------------
Confidence 6999999999999999999999999999999874321100 0 0
Q ss_pred EEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHh
Q 022277 139 LRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~ 216 (300)
..+ ... + ..+...++.+.+.+.+ .|++++++ +|++++.++++ +.|.+++| ++.+|.||+|+|.++.+
T Consensus 44 -~~~--~~~--~---~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 44 -PNY--PGL--L---DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp -CCS--TTC--T---TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred -hcc--CCC--c---CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEECCC-EEEECEEEECCCCCCCc
Confidence 000 000 0 0123345555555444 38999999 99999987666 55888888 89999999999999988
Q ss_pred hhhcCCC
Q 022277 217 AKWIGFS 223 (300)
Q Consensus 217 r~~~g~~ 223 (300)
++.+|++
T Consensus 113 ~~~~g~~ 119 (180)
T 2ywl_A 113 PSLLGLT 119 (180)
T ss_dssp HHHHTCC
T ss_pred cccCCCC
Confidence 8888765
No 47
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.57 E-value=1.9e-14 Score=117.59 Aligned_cols=128 Identities=17% Similarity=0.129 Sum_probs=86.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCc-HHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVG-SDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~ 135 (300)
+.+||+|||||++|+++|+.|++.|.+|+|+|+.... .| ....+.. .+.. ..+...
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~--~G--~~~~~~~------~~~~~~~~~~~------------- 58 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA--VM--MPFLPPK------PPFPPGSLLER------------- 58 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--TT--CCSSCCC------SCCCTTCHHHH-------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc--CC--cccCccc------cccchhhHHhh-------------
Confidence 4689999999999999999999999999999998432 11 1111100 0000 000000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
++ . ..++ ++..+.+.|.+.+ ++++++ +++|+++..++++++.|.+.+|+++.||.||+|+|.
T Consensus 59 ------~~--d-~~g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 59 ------AY--D-PKDE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp ------HC--C-TTCC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred ------hc--c-CCCC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCC
Confidence 00 0 0011 4556666666555 378888 579999998877766788888888999999999999
Q ss_pred ChHhhhhcCC
Q 022277 213 RSPIAKWIGF 222 (300)
Q Consensus 213 ~s~~r~~~g~ 222 (300)
++..+..+|.
T Consensus 124 ~s~~~~~~G~ 133 (232)
T 2cul_A 124 FLGARLFLGG 133 (232)
T ss_dssp CSSCEEEETT
T ss_pred ChhhceecCC
Confidence 9877765554
No 48
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.56 E-value=2e-14 Score=132.46 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=92.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCC----CceeeEchhHHHHHHHcCCcHHHHh----------
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLTLFKNGWSVLDALGVGSDLRS---------- 121 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~----g~~~~~~~~~~~~l~~~g~~~~~~~---------- 121 (300)
...+||+|||||++||++|+.|+++|++|+||||.+.++.. +.++. .......+.+++.+....
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~--~~~~~~~~~~g~~ds~~~~~~~~~~~~~ 196 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMN--AVGTKQQTAHGVEDKVEWFIEDAMKGGR 196 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEE--CSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeE--ccCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 45689999999999999999999999999999999876421 11111 111112222222111000
Q ss_pred ---------ccc--cccceEEEcCCCceEEEecC-CCCCCCcce----eeecHHHHHHHHHhcC--CCCeEEeCCeEEEE
Q 022277 122 ---------QFL--EIKGMAVKSEDGRELRSFGF-KDEDASQEV----RAVERRILLETLANQL--PPESVQFSSELAKI 183 (300)
Q Consensus 122 ---------~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i 183 (300)
... ....+.+....|..+..+.. .....+... ..+....+.+.|.+.+ .|++|+++++|+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 197 QQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKL 276 (566)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEE
T ss_pred CCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 000 00000000000100000000 000000000 0133556667776655 48999999999999
Q ss_pred EEcC-CceEEEEEc--CCc--EEEcCEEEEcCCCChHhhhhc
Q 022277 184 ETSG-NGVTILELV--NGT--RIYANIVIGCDGIRSPIAKWI 220 (300)
Q Consensus 184 ~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~s~~r~~~ 220 (300)
..++ +.+++|.+. +|+ ++.||.||+|+|.++..++.+
T Consensus 277 ~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 9887 666666665 665 689999999999999764443
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.56 E-value=4e-14 Score=123.65 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=48.8
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+++..+.+.|.+.+ .|++++++++|++++.++++ +.|.+.+| ++.||.||+|+|.++.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-VTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-EEEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-EEEEECCC-eEEcCEEEEcCCccHH
Confidence 466778888877766 48999999999999987776 55888887 4999999999999874
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.55 E-value=3.6e-14 Score=125.13 Aligned_cols=149 Identities=21% Similarity=0.262 Sum_probs=89.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC------CCce--ee--Echh---------HHHHHHHcCCcH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTS--LT--LFKN---------GWSVLDALGVGS 117 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~------~g~~--~~--~~~~---------~~~~l~~~g~~~ 117 (300)
..+||+|||||++|+++|+.|+++|.+|+|+|+++.++. +|.. .. ..+. ....+..+...+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 358999999999999999999999999999999986531 1111 00 0000 001111111000
Q ss_pred HHHhccccccceEEEc-CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEc----CCce
Q 022277 118 DLRSQFLEIKGMAVKS-EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETS----GNGV 190 (300)
Q Consensus 118 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~----~~~~ 190 (300)
+.. .....++.+.. ..+.. +.......+.+.|.+.+ .|++++++++|+++..+ +++
T Consensus 83 -~~~-~~~~~Gi~~~~~~~g~~--------------~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~- 145 (401)
T 2gqf_A 83 -FIS-LVAEQGITYHEKELGQL--------------FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR- 145 (401)
T ss_dssp -HHH-HHHHTTCCEEECSTTEE--------------EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-
T ss_pred -HHH-HHHhCCCceEECcCCEE--------------ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-
Confidence 000 00000111111 11110 00003455666665554 38999999999999876 455
Q ss_pred EEEEEcCCcEEEcCEEEEcCCCCh-----------HhhhhcCCC
Q 022277 191 TILELVNGTRIYANIVIGCDGIRS-----------PIAKWIGFS 223 (300)
Q Consensus 191 ~~v~~~~g~~~~ad~vV~A~G~~s-----------~~r~~~g~~ 223 (300)
+.|.+.+| +++||.||+|+|.+| .+.+.+|..
T Consensus 146 ~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 146 FVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp EEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred EEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 56878776 799999999999998 455566655
No 51
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.54 E-value=6.2e-14 Score=128.75 Aligned_cols=153 Identities=18% Similarity=0.203 Sum_probs=96.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCCCCceeeEc----hhHHHHHHHcCC-cHHHHhccccccceE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLF----KNGWSVLDALGV-GSDLRSQFLEIKGMA 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~-~~~~~g~~~~~~----~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 130 (300)
..+||+|||||++|+++|+.|++.|.+|+|+|+.. .++..++..... ....+.++.++- ...... ...+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d----~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAID----QAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHH----HHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhh----hcccc
Confidence 46899999999999999999999999999999985 333222221111 112233344432 111110 11122
Q ss_pred EEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEE
Q 022277 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVI 207 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (300)
+...+. ............+++..+.+.|.+.+ +|+++ ++++|+++..+++.+++|.+.+|..+.||.||
T Consensus 103 f~~l~~-------~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VV 174 (651)
T 3ces_A 103 FRILNA-------SKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVV 174 (651)
T ss_dssp EEEEST-------TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEE
T ss_pred hhhhhc-------ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEE
Confidence 211000 00000111223567777777666554 47888 57899999888787778999989889999999
Q ss_pred EcCCCChHhhhhcC
Q 022277 208 GCDGIRSPIAKWIG 221 (300)
Q Consensus 208 ~A~G~~s~~r~~~g 221 (300)
+|+|.++..+...|
T Consensus 175 LATGt~s~~~~i~G 188 (651)
T 3ces_A 175 LTVGTFLDGKIHIG 188 (651)
T ss_dssp ECCSTTTCCEEECC
T ss_pred EcCCCCccCccccC
Confidence 99999886655444
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.54 E-value=5.1e-14 Score=126.20 Aligned_cols=72 Identities=10% Similarity=0.135 Sum_probs=57.5
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEE---------------cCCceEEEEEcCCcEE--EcCEEEEcCCCChH
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIET---------------SGNGVTILELVNGTRI--YANIVIGCDGIRSP 215 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~---------------~~~~~~~v~~~~g~~~--~ad~vV~A~G~~s~ 215 (300)
.++..++.+.|.+.+ .|++++++++|++++. ++++++.|.+.+| ++ .||.||+|+|.++.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 456778888877766 5899999999999987 5556667888888 58 99999999999986
Q ss_pred -hhhhcCCCCCcc
Q 022277 216 -IAKWIGFSEPKY 227 (300)
Q Consensus 216 -~r~~~g~~~~~~ 227 (300)
+.+.+|...|..
T Consensus 256 ~l~~~~g~~~~~~ 268 (448)
T 3axb_A 256 RLLNPLGIDTFSR 268 (448)
T ss_dssp HHHGGGTCCCSEE
T ss_pred HHHHHcCCCCccc
Confidence 777777665544
No 53
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.54 E-value=7.1e-13 Score=120.38 Aligned_cols=110 Identities=13% Similarity=-0.015 Sum_probs=71.5
Q ss_pred eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEEEEcCCCChH-hhhh-cCCC--
Q 022277 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGIRSP-IAKW-IGFS-- 223 (300)
Q Consensus 155 ~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~~s~-~r~~-~g~~-- 223 (300)
.++...+...|.+.+ .|++++++++|+++..++ +++.|.+. +|+ .+.||.||+|+|.++. +.+. ++..
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~ 223 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSP 223 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcc
Confidence 467888888887766 589999999999998876 45667773 565 7999999999999985 4554 5432
Q ss_pred CCcc--ccceEEEEEeeCCCCCCCCCceEEEE--eCCeEEEEEEcCCCeEEEE
Q 022277 224 EPKY--VGHCAYRGLGYYPNGQPFEPKLNYIY--GRGVRAGYVPVSPTKVYWF 272 (300)
Q Consensus 224 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~ 272 (300)
.+.. .|++. ..+. ..+.. ..+++ .++..++++|..++.+.+.
T Consensus 224 ~~i~p~rG~~~---~~~~--~~~~~--~~~~~~~~dg~~~~~~P~~~g~~~iG 269 (501)
T 2qcu_A 224 YGIRLIKGSHI---VVPR--VHTQK--QAYILQNEDKRIVFVIPWMDEFSIIG 269 (501)
T ss_dssp SCBCCEEEEEE---EEEC--SSSCS--CEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred cccccceeEEE---EECC--CCCCc--eEEEeecCCCCEEEEEEcCCCcEEEc
Confidence 2222 23322 2231 11111 22333 2566778899987765433
No 54
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.53 E-value=1.9e-13 Score=115.87 Aligned_cols=136 Identities=18% Similarity=0.274 Sum_probs=90.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCc-------eeeEchhHHHHHHHcCCcHHHHhccccc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGT-------SLTLFKNGWSVLDALGVGSDLRSQFLEI 126 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~-------~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 126 (300)
...+||+|||||++|+++|+.|++. |++|+|+|+.+.++.+.. ...+.....++++.+++....
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~------- 135 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYED------- 135 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEE-------
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccccc-------
Confidence 4568999999999999999999998 999999999887642111 122334445566665543110
Q ss_pred cceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcC----C--ceEEEEEc-
Q 022277 127 KGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSG----N--GVTILELV- 196 (300)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~----~--~~~~v~~~- 196 (300)
. + ......+...+...|.+.+ ++++++.+++|+++..++ + .+.+|.+.
T Consensus 136 -------~-g--------------~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 136 -------E-G--------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp -------C-S--------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred -------C-C--------------CeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 0 1 1111113345566665544 489999999999998773 3 55666552
Q ss_pred -------------CCcEEEc---------------CEEEEcCCCChHhhhhc
Q 022277 197 -------------NGTRIYA---------------NIVIGCDGIRSPIAKWI 220 (300)
Q Consensus 197 -------------~g~~~~a---------------d~vV~A~G~~s~~r~~~ 220 (300)
++.++.| ++||+|+|+.+++..++
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2347999 99999999998776555
No 55
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.53 E-value=1.4e-13 Score=126.03 Aligned_cols=149 Identities=17% Similarity=0.160 Sum_probs=94.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCCCCceeeEc----hhHHHHHHHcCC-cHHHHhccccccceE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLF----KNGWSVLDALGV-GSDLRSQFLEIKGMA 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~-~~~~~g~~~~~~----~~~~~~l~~~g~-~~~~~~~~~~~~~~~ 130 (300)
..+||+|||||++|+++|+.|++.|.+|+|+|+.. .++..++..... ....+.++.++- ...... ..++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d----~~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAID----QTGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHH----HHEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhh----hcccc
Confidence 46899999999999999999999999999999985 333222211111 112333344432 221111 11122
Q ss_pred EEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEE
Q 022277 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVI 207 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (300)
+...+.. ...........+++..+.+.|.+.+ +|++| ++++|+++..+++.+++|.+.+|..+.||.||
T Consensus 102 f~~l~~~-------kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVV 173 (637)
T 2zxi_A 102 FKMLNTR-------KGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVV 173 (637)
T ss_dssp EEEESTT-------SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEE
T ss_pred eeecccc-------cCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 2110000 0000111223567777777776655 47888 57899999888888778999999899999999
Q ss_pred EcCCCChHhh
Q 022277 208 GCDGIRSPIA 217 (300)
Q Consensus 208 ~A~G~~s~~r 217 (300)
+|+|.++..+
T Consensus 174 LATG~~s~~~ 183 (637)
T 2zxi_A 174 VTTGTFLNGV 183 (637)
T ss_dssp ECCTTCBTCE
T ss_pred EccCCCccCc
Confidence 9999987544
No 56
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.52 E-value=3.3e-14 Score=131.16 Aligned_cols=159 Identities=14% Similarity=0.124 Sum_probs=88.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCC----CceeeEchhHHHHHHHcCCcHHHHhc---------
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLTLFKNGWSVLDALGVGSDLRSQ--------- 122 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~----g~~~~~~~~~~~~l~~~g~~~~~~~~--------- 122 (300)
...+||+|||||++||++|+.|+++|++|+||||.+.++.. +.++.... ....+.+++.+.....
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAW--TDQQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCC--CHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 34689999999999999999999999999999999876421 11121111 1122222221110000
Q ss_pred ----------ccc--ccceEEEcCCCceEEEecCCCCCCCcceee-----ecHHHHHHHHHhcC--CCCeEEeCCeEEEE
Q 022277 123 ----------FLE--IKGMAVKSEDGRELRSFGFKDEDASQEVRA-----VERRILLETLANQL--PPESVQFSSELAKI 183 (300)
Q Consensus 123 ----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~l~~~l~~~~--~g~~i~~~~~v~~i 183 (300)
... ...+.+....|..+..+............. .....+.+.|.+.+ .|++|+++++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 202 NINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEV 281 (571)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEE
T ss_pred CCCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEe
Confidence 000 000000000000000000000000000000 23456666666655 48999999999999
Q ss_pred EEcC-CceEEEEEc--CCc--EEEcCEEEEcCCCChHh
Q 022277 184 ETSG-NGVTILELV--NGT--RIYANIVIGCDGIRSPI 216 (300)
Q Consensus 184 ~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~s~~ 216 (300)
..++ +.+++|.+. +|+ ++.||.||+|+|.++..
T Consensus 282 ~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n 319 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKN 319 (571)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred EEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccC
Confidence 9876 666666655 565 68999999999998863
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.52 E-value=2.5e-14 Score=124.53 Aligned_cols=120 Identities=19% Similarity=0.198 Sum_probs=84.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|||+.+.++ |. +.. . .+ ...++.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--g~----------~~~-~----------~~--~~~~~~--- 64 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--GQ----------LAA-L----------YP--EKHIYD--- 64 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--HH----------HHH-T----------CT--TSEECC---
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--Cc----------ccc-c----------CC--Cccccc---
Confidence 46899999999999999999999999999999987652 11 000 0 00 000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
......+.+.++.+.+.+.+ .+++++++++|++++.++++.+.|.+.+|+.+.+|.||+|+|..+
T Consensus 65 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 65 -------------VAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp -------------STTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred -------------CCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 00111244556666665544 378999999999999876644668888888899999999999976
Q ss_pred Hhh
Q 022277 215 PIA 217 (300)
Q Consensus 215 ~~r 217 (300)
..+
T Consensus 132 ~~~ 134 (360)
T 3ab1_A 132 FEP 134 (360)
T ss_dssp CCB
T ss_pred CCC
Confidence 443
No 58
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.51 E-value=2.3e-13 Score=120.35 Aligned_cols=166 Identities=16% Similarity=0.140 Sum_probs=91.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCC-Cc--eeeE-chhH------HHHHHHcCCcHHHHhc--
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTG-GT--SLTL-FKNG------WSVLDALGVGSDLRSQ-- 122 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~-g~--~~~~-~~~~------~~~l~~~g~~~~~~~~-- 122 (300)
..+||+|||||++|+++|+.|+++ |++|+|||+....... +. +..+ .+.. ....+.++++......
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999 9999999998543211 01 1012 1110 0011111111110000
Q ss_pred --cccccceE-EEc---CCCceEEEecCCC-----------CC-----CCcceeeecHHHHHHHHHhcC--CCCeEEeCC
Q 022277 123 --FLEIKGMA-VKS---EDGRELRSFGFKD-----------ED-----ASQEVRAVERRILLETLANQL--PPESVQFSS 178 (300)
Q Consensus 123 --~~~~~~~~-~~~---~~~~~~~~~~~~~-----------~~-----~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~ 178 (300)
.....+.. +.. ..+ .+..-.... .. .......++...+.+.|.+.+ .|+++++++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g-~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~ 193 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSG-LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNT 193 (405)
T ss_dssp CCCEEECCEEEEESSCCSSS-CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCcEEeeCeEEehhhHhHCC-CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCC
Confidence 00000110 010 001 000000000 00 011123467778888887766 489999999
Q ss_pred eEE---------EEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-Hhhh-hcCCCCC
Q 022277 179 ELA---------KIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAK-WIGFSEP 225 (300)
Q Consensus 179 ~v~---------~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s-~~r~-~~g~~~~ 225 (300)
+|+ ++..+++++ .|.+.+| .+.||.||+|+|.+| .+++ .+|+..+
T Consensus 194 ~v~~~~g~~~~~~i~~~~~~v-~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~ 249 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTNTHQ-IVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTR 249 (405)
T ss_dssp EEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCC
T ss_pred EEEeccccccccceEeeCCeE-EEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCC
Confidence 999 887766654 5777766 799999999999998 6777 7787655
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.50 E-value=5.1e-14 Score=121.24 Aligned_cols=122 Identities=18% Similarity=0.203 Sum_probs=84.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.++ |. +... .+ ...++.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--g~----------~~~~-----------~~--~~~~~~--- 55 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--GQ----------LTAL-----------YP--EKYIYD--- 55 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--HH----------HHHT-----------CT--TSEECC---
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--Ce----------eecc-----------CC--Cceeec---
Confidence 46899999999999999999999999999999987652 11 0000 00 000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
......+.+.++.+.+.+.+ .+++++++++|++++.+++. +.|.+.+|+.+.+|.||+|+|..+
T Consensus 56 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 56 -------------VAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp -------------STTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEEETTSCEEEEEEEEECCTTSE
T ss_pred -------------cCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEEECCCCEEEeCEEEECCCCCC
Confidence 00011234556666655444 26889999999999887664 668888888899999999999976
Q ss_pred Hhhhhc
Q 022277 215 PIAKWI 220 (300)
Q Consensus 215 ~~r~~~ 220 (300)
...+..
T Consensus 122 ~~p~~~ 127 (335)
T 2zbw_A 122 FEPRRI 127 (335)
T ss_dssp EEECCC
T ss_pred CCCCCC
Confidence 444333
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.49 E-value=1.6e-13 Score=126.00 Aligned_cols=148 Identities=16% Similarity=0.169 Sum_probs=92.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCCCCceeeEch----hHHHHHHHcC-CcHHHHhccccccceE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLFK----NGWSVLDALG-VGSDLRSQFLEIKGMA 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~-~~~~~g~~~~~~~----~~~~~l~~~g-~~~~~~~~~~~~~~~~ 130 (300)
..+||+|||||++|+++|+.|++.|.+|+|+|+.. .++..++...... ...+.+..++ +...... ..++.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d----~~gi~ 95 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID----ATGIQ 95 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH----HHEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH----hcCCc
Confidence 56999999999999999999999999999999985 2322222112211 1222222222 1111111 11122
Q ss_pred EEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEE
Q 022277 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVI 207 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (300)
+...+.. ...........+++..+.+.|.+.+ ++++++ +.+|+++..+++.+.+|.+.+|..+.||.||
T Consensus 96 f~~l~~~-------kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VV 167 (641)
T 3cp8_A 96 FRMLNRS-------KGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAI 167 (641)
T ss_dssp EEEECSS-------SCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEE
T ss_pred hhhcccc-------cCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 2110000 0000111224577777777776655 478885 5589999888777777889999899999999
Q ss_pred EcCCCChHh
Q 022277 208 GCDGIRSPI 216 (300)
Q Consensus 208 ~A~G~~s~~ 216 (300)
+|+|.++..
T Consensus 168 LATG~~s~~ 176 (641)
T 3cp8_A 168 LACGTFLNG 176 (641)
T ss_dssp ECCTTCBTC
T ss_pred ECcCCCCCc
Confidence 999998754
No 61
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.49 E-value=2.6e-13 Score=115.28 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=71.6
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 55 ~~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
.|+.+||+||||||+|++||+.|+++|++|+|+|+... +|... ....
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~---gg~~~--------------------~~~~---------- 49 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN---RNRVT--------------------QNSH---------- 49 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---GGGGS--------------------SCBC----------
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC---CCeee--------------------eecC----------
Confidence 45789999999999999999999999999999998742 12100 0000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
.+ . ....+...++.+...+.+ .+...+....+..+...+++.+.|.+.+|+++.+|.||+|+|.
T Consensus 50 ------~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 50 ------GF--I------TRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp ------CS--T------TCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred ------Cc--c------CCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 00 0 000123334444333322 1333344555666666655556688999999999999999997
Q ss_pred Ch
Q 022277 213 RS 214 (300)
Q Consensus 213 ~s 214 (300)
..
T Consensus 116 ~p 117 (304)
T 4fk1_A 116 QE 117 (304)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 62
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.49 E-value=2.7e-12 Score=118.20 Aligned_cols=67 Identities=10% Similarity=-0.001 Sum_probs=51.4
Q ss_pred ecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEEEEcCCCCh-HhhhhcCC
Q 022277 156 VERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGIRS-PIAKWIGF 222 (300)
Q Consensus 156 i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~~s-~~r~~~g~ 222 (300)
++...+...+.+.+ .|++|+.+++|+++..+++++++|.+. +|+ .+.||.||+|+|.++ .+.+..|.
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 45666766666655 589999999999999888777777764 343 699999999999998 45555554
No 63
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.48 E-value=5.1e-13 Score=128.37 Aligned_cols=74 Identities=26% Similarity=0.348 Sum_probs=59.1
Q ss_pred eeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-hhhhcCCCCCccc
Q 022277 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKYV 228 (300)
Q Consensus 154 ~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~-~r~~~g~~~~~~~ 228 (300)
..+++..+...|.+.+ .|++|+++++|++++.++++++.|.+.+| ++.||.||+|+|.++. +.+.+|...|...
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~p 222 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPLLP 222 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCCEE
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCcccee
Confidence 3467778888887766 58999999999999988777667888877 7999999999999985 4455676655444
No 64
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.47 E-value=6e-14 Score=120.42 Aligned_cols=116 Identities=22% Similarity=0.254 Sum_probs=82.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.++ |.. .. . .+ ...+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--G~~----------~~-------~----~~--~~~~~~--- 57 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--GQL----------SA-------L----YP--EKYIYD--- 57 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--HHH----------HH-------H----CT--TSEECC---
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--cee----------hh-------c----CC--CceEec---
Confidence 45899999999999999999999999999999998752 210 00 0 00 000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
......+.+.++...+.+.+ .+++++++++|++++.++++.+.|.+.+|+ +.+|.||+|+|..+
T Consensus 58 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 58 -------------VAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp -------------STTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred -------------cCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 00111244566666666554 378999999999999887745778888886 99999999999854
No 65
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.47 E-value=1.2e-13 Score=119.55 Aligned_cols=128 Identities=18% Similarity=0.227 Sum_probs=83.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.++ |......+ .+.+.... ....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g--g~~~~~~~-------~~~~~~~~--~~~~------------ 59 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG--GAWQHAWH-------SLHLFSPA--GWSS------------ 59 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS--GGGGGSCT-------TCBCSSCG--GGSC------------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC--CcccCCCC-------CcEecCch--hhhh------------
Confidence 5899999999999999999999999999999998763 21000000 00000000 0000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEE-EEEcCCcEEEcCEEEEcCCCCh
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTI-LELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~-v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+... ........+.++.+.+.+.+ .+++++++++|++++.+++. +. |.+++| ++.+|.||+|+|.++
T Consensus 60 -~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 60 -IPGWPMP----ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-LRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp -CSSSCCC----CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-EEEEETTSC-EEEEEEEEECCCSGG
T ss_pred -CCCCCCC----CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-EEEEEeCCC-EEEeCEEEECCCCCC
Confidence 0000000 11112244566666665544 38899999999999988765 66 888887 899999999999877
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 133 ~ 133 (357)
T 4a9w_A 133 E 133 (357)
T ss_dssp G
T ss_pred C
Confidence 4
No 66
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.46 E-value=7.2e-13 Score=121.06 Aligned_cols=133 Identities=23% Similarity=0.349 Sum_probs=85.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHH-HcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQ-RLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~-~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++|+++|+.|+ +.|++|+|+|+++.++ |. +......++..++......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G--Gt--------w~~~~ypg~~~d~~s~~~~---------- 66 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG--GT--------WYWNRYPGALSDTESHLYR---------- 66 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC--TH--------HHHCCCTTCEEEEEGGGSS----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC--Cc--------ccccCCCCceecCCcceee----------
Confidence 4589999999999999999999 8999999999988663 21 0000001110000000000
Q ss_pred CceEEEecCCC---CCCCcceeeecHHHHHHHHHhcC--CCC--eEEeCCeEEEEEEcCC-ceEEEEEcCCcEEEcCEEE
Q 022277 136 GRELRSFGFKD---EDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVI 207 (300)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~l~~~~--~g~--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV 207 (300)
+.+.. ...........+.++.+.+.+.+ .++ .++++++|++++.+++ +.|.|.+.+|+++.||.||
T Consensus 67 ------~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV 140 (540)
T 3gwf_A 67 ------FSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVV 140 (540)
T ss_dssp ------CCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred ------eccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEE
Confidence 00000 00011112355666666665444 266 8999999999998765 4577999999889999999
Q ss_pred EcCCCChH
Q 022277 208 GCDGIRSP 215 (300)
Q Consensus 208 ~A~G~~s~ 215 (300)
+|+|.+|.
T Consensus 141 ~AtG~~s~ 148 (540)
T 3gwf_A 141 NAVGLLSA 148 (540)
T ss_dssp ECCCSCCS
T ss_pred ECCccccc
Confidence 99998764
No 67
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.45 E-value=4.7e-12 Score=114.95 Aligned_cols=61 Identities=16% Similarity=0.319 Sum_probs=44.8
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHhhhhc
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPIAKWI 220 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~r~~~ 220 (300)
.+.+.|.+.+ .|++|+++++|++|..+++++.+|++.+|+++.||.||.+.+.....++.+
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 4555555544 489999999999999999988889999999999999999998877665555
No 68
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=113.42 Aligned_cols=138 Identities=16% Similarity=0.146 Sum_probs=81.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCcee----------e-------Echh----HHHHHHHcC
Q 022277 59 EDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSL----------T-------LFKN----GWSVLDALG 114 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~----------~-------~~~~----~~~~l~~~g 114 (300)
+||+|||||++|+++|+.|++ .|++|+|+||++.++...... . ..+. ..+.++.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~- 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL- 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH-
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH-
Confidence 589999999999999999999 999999999987653211110 0 0111 11111111
Q ss_pred CcHHHHhccccccceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEE
Q 022277 115 VGSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILE 194 (300)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~ 194 (300)
..... ...+. .. ........ ........-....+.+.|.+.+ |++|+++++|++++.++++ +.|.
T Consensus 81 -----~~~g~----~~~~~--~~-~~~~~~~~-~~~~~~~~~g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~-~~v~ 145 (342)
T 3qj4_A 81 -----LAYGV----LRPLS--SP-IEGMVMKE-GDCNFVAPQGISSIIKHYLKES-GAEVYFRHRVTQINLRDDK-WEVS 145 (342)
T ss_dssp -----HHTTS----CEECC--SC-EETCCC---CCEEEECTTCTTHHHHHHHHHH-TCEEESSCCEEEEEECSSS-EEEE
T ss_pred -----HhCCC----eecCc--hh-hcceeccC-CccceecCCCHHHHHHHHHHhc-CCEEEeCCEEEEEEEcCCE-EEEE
Confidence 00000 00000 00 00000000 0000000111235666666655 7899999999999998777 5688
Q ss_pred EcCCcEEEcCEEEEcCCC
Q 022277 195 LVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 195 ~~~g~~~~ad~vV~A~G~ 212 (300)
+.+|+.+.+|.||+|+..
T Consensus 146 ~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 146 KQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp ESSSCCEEESEEEECSCH
T ss_pred ECCCCEEEcCEEEECCCH
Confidence 988877899999999974
No 69
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.43 E-value=9.1e-13 Score=111.21 Aligned_cols=110 Identities=20% Similarity=0.250 Sum_probs=77.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
++||+|||||++|+++|..|+++|++|+|+|+......... ..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~-----------------------~~-------------- 44 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFAS-----------------------HS-------------- 44 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCS-----------------------CC--------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccch-----------------------hh--------------
Confidence 47999999999999999999999999999998763210000 00
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
.. ..........++.+.+.+.+ ++++++ +.+|++++.+++. +.|.+.+|+++.+|.||+|+|..+
T Consensus 45 ----~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 45 ----HG------FLGQDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGE-FIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp ----CS------STTCTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCCEE
T ss_pred ----cC------CcCCCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCe-EEEEECCCCEEEcCEEEECCCCCC
Confidence 00 00011234456666655544 255555 4599999988766 668999998899999999999876
Q ss_pred Hh
Q 022277 215 PI 216 (300)
Q Consensus 215 ~~ 216 (300)
..
T Consensus 113 ~~ 114 (297)
T 3fbs_A 113 EL 114 (297)
T ss_dssp EC
T ss_pred CC
Confidence 44
No 70
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.43 E-value=2.4e-12 Score=114.68 Aligned_cols=142 Identities=19% Similarity=0.140 Sum_probs=83.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC-CCce---eeEchhHHHHHHHcCC--cHHHHhccccccceE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT-GGTS---LTLFKNGWSVLDALGV--GSDLRSQFLEIKGMA 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~-~g~~---~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~ 130 (300)
+.+||+|||||++|+++|+.|+++|++|+|||+.+.... .+.. ......+...++.+|+ +... ......+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~---~~~~~~~~ 97 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE---EFGYFGHY 97 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH---HHCEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh---ccccccee
Confidence 457999999999999999999999999999999873321 1221 2234456666677754 2221 12223333
Q ss_pred EEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCC-eEEEEEEcCCceEEEEEcCCcEEEcCEEE
Q 022277 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSS-ELAKIETSGNGVTILELVNGTRIYANIVI 207 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~-~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (300)
+.......+ .+. .. .......+++..+...|.+.+ .|++++++. .+.+++. ....+|+||
T Consensus 98 ~~~~~~~~~-~~~--~~-~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~~-------------~~~~ad~VV 160 (430)
T 3ihm_A 98 YYVGGPQPM-RFY--GD-LKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLEG-------------LSEQYDLLV 160 (430)
T ss_dssp EEECSSSCE-EEE--EE-EEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHHH-------------HHTTSSEEE
T ss_pred EEECCCCcc-ccc--hh-cCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhhh-------------hcccCCEEE
Confidence 332222111 110 00 012345678888877777666 477776632 1111100 012589999
Q ss_pred EcCCCChHhhh
Q 022277 208 GCDGIRSPIAK 218 (300)
Q Consensus 208 ~A~G~~s~~r~ 218 (300)
+|+|.+|.++.
T Consensus 161 ~AdG~~S~~~~ 171 (430)
T 3ihm_A 161 VCTGKYALGKV 171 (430)
T ss_dssp ECCCCTTGGGG
T ss_pred ECCCCcchHHh
Confidence 99999997764
No 71
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.42 E-value=1.5e-12 Score=117.10 Aligned_cols=55 Identities=29% Similarity=0.336 Sum_probs=45.7
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+.+.|.+.+..++|+++++|++|+.++++ +.|++.+|+++.||.||+|+.....
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vi~a~p~~~~ 290 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSC-YSLELDNGVTLDADSVIVTAPHKAA 290 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSS-EEEEESSSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCe-EEEEECCCCEEECCEEEECCCHHHH
Confidence 566677776644689999999999988877 5699999988999999999987653
No 72
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.41 E-value=1.2e-12 Score=119.75 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=84.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|||+++.++ |. +......|+..++......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--Gt--------w~~~~ypg~~~dv~s~~y~----------- 78 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG--GV--------WYWNRYPGARCDVESIDYS----------- 78 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCTTTSS-----------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------cccCCCCCceeCCCchhcc-----------
Confidence 46899999999999999999999999999999988763 21 1100111111111000000
Q ss_pred ceEEEecCCCC---CCCcceeeecHHHHHHHHHhcC--CCC--eEEeCCeEEEEEEcCC-ceEEEEEcCCcEEEcCEEEE
Q 022277 137 RELRSFGFKDE---DASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIG 208 (300)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~i~~~~l~~~l~~~~--~g~--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~ 208 (300)
+.+... ..........+.++.+.+.+.+ .++ +++++++|++++.+++ ..|.|.+.+|+++.||+||+
T Consensus 79 -----~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~ 153 (549)
T 4ap3_A 79 -----YSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVV 153 (549)
T ss_dssp -----CCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred -----cccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEE
Confidence 000000 0000111245556655554433 255 7999999999998765 35779999998999999999
Q ss_pred cCCCChH
Q 022277 209 CDGIRSP 215 (300)
Q Consensus 209 A~G~~s~ 215 (300)
|+|..|.
T Consensus 154 AtG~~s~ 160 (549)
T 4ap3_A 154 AAGPLSN 160 (549)
T ss_dssp CCCSEEE
T ss_pred CcCCCCC
Confidence 9997653
No 73
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.40 E-value=1.7e-12 Score=116.31 Aligned_cols=150 Identities=20% Similarity=0.193 Sum_probs=83.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhc-ccccc------
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQ-FLEIK------ 127 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~------ 127 (300)
..+||+|||||++|+++|..|++.|+ +|+|||+.+.++ |. +....... ..+++....... ..+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G--G~-~~~~~~~~---~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG--GV-WNYTSTLS---NKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS--TT-CSCCSCCC---SCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC--Ce-ecCCCCCC---cccccccccccccccccccccccC
Confidence 46899999999999999999999999 999999987663 11 00000000 000000000000 00000
Q ss_pred c--eEEEc----CCCceEEEecCCCCC-CCcceeeecHHHHHHHHHhcCC--CCeEEeCCeEEEEEEcCCceEEEEEcC-
Q 022277 128 G--MAVKS----EDGRELRSFGFKDED-ASQEVRAVERRILLETLANQLP--PESVQFSSELAKIETSGNGVTILELVN- 197 (300)
Q Consensus 128 ~--~~~~~----~~~~~~~~~~~~~~~-~~~~~~~i~~~~l~~~l~~~~~--g~~i~~~~~v~~i~~~~~~~~~v~~~~- 197 (300)
. ..++. ...... ..+.... .........+..+.+.|.+.+. +..++++++|++++..+++ |.|++.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~~V~~~~~ 155 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIEL--MGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS-WVVTYKGT 155 (447)
T ss_dssp BCCCCCCTTCBCSSCHHH--HSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-EEEEEEES
T ss_pred CccCchhhhhccCCCHHH--hccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-EEEEEeec
Confidence 0 00000 000000 0000000 0011123456666666655442 5679999999999887665 6677765
Q ss_pred --Cc---EEEcCEEEEcCCCChH
Q 022277 198 --GT---RIYANIVIGCDGIRSP 215 (300)
Q Consensus 198 --g~---~~~ad~vV~A~G~~s~ 215 (300)
|+ ++.+|.||+|+|.+|.
T Consensus 156 ~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 156 KAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp STTCCEEEEEESEEEECCCSSSS
T ss_pred CCCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999764
No 74
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.39 E-value=2e-12 Score=118.26 Aligned_cols=133 Identities=19% Similarity=0.218 Sum_probs=83.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|||+++.++ |. +......++..+.......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~G--Gt--------w~~~~yPg~~~d~~~~~y~----------- 66 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVG--GT--------WYWNRYPGCRLDTESYAYG----------- 66 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCHHHHC-----------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------cccCCCCceeecCchhhcc-----------
Confidence 56899999999999999999999999999999998763 21 1000011110000000000
Q ss_pred ceEEEecCCCC---CCCcceeeecHHHHHHHHHhcC--CCC--eEEeCCeEEEEEEcCC-ceEEEEEcCCcEEEcCEEEE
Q 022277 137 RELRSFGFKDE---DASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIG 208 (300)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~i~~~~l~~~l~~~~--~g~--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~ 208 (300)
+.+... ..........+.++.+.+.+.+ .++ .++++++|++++.+++ +.|.|.+.+|+++.||+||+
T Consensus 67 -----~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~ 141 (545)
T 3uox_A 67 -----YFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLIS 141 (545)
T ss_dssp -----HHHHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEE
T ss_pred -----cccCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEE
Confidence 000000 0001111244555555554433 144 7999999999987654 46789999998999999999
Q ss_pred cCCCChH
Q 022277 209 CDGIRSP 215 (300)
Q Consensus 209 A~G~~s~ 215 (300)
|+|..|.
T Consensus 142 AtG~~s~ 148 (545)
T 3uox_A 142 ATGPLSA 148 (545)
T ss_dssp CCCSCBC
T ss_pred CcCCCCC
Confidence 9997653
No 75
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.39 E-value=2.4e-12 Score=109.84 Aligned_cols=111 Identities=21% Similarity=0.260 Sum_probs=77.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
+.+||+|||||++|+++|+.|+++|++|+|+|+. + +|.... .
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~--gg~~~~----------------------------------~ 55 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P--GGQLTE----------------------------------A 55 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T--TGGGGG----------------------------------C
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C--CCeecc----------------------------------c
Confidence 4589999999999999999999999999999998 3 221000 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
... .. ..........++.+.+.+.+ .++++++ ++|+++..+++. +.|.+.+|..+.+|.||+|+|...
T Consensus 56 ~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 56 GIV--DD------YLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE-FVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp CEE--CC------STTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C-EEEEESSSCEEEEEEEEECCCCEE
T ss_pred ccc--cc------cCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE-EEEEECCCCEEEcCEEEECcCCCC
Confidence 000 00 00011144556666655444 3789998 999999887665 558888888999999999999875
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 126 ~ 126 (323)
T 3f8d_A 126 R 126 (323)
T ss_dssp C
T ss_pred c
Confidence 3
No 76
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.38 E-value=1.2e-12 Score=120.02 Aligned_cols=134 Identities=23% Similarity=0.336 Sum_probs=83.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.++ |. +......++..+......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--G~--------w~~~~~pg~~~d~~~~~~------------ 72 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG--GV--------WYWNRYPGARCDIESIEY------------ 72 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCTTTS------------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------ccccCCCceeeccccccc------------
Confidence 46899999999999999999999999999999998763 21 000000010000000000
Q ss_pred ceEEEecCCCC---CCCcceeeecHHHHHHHHHh---cCC-CCeEEeCCeEEEEEEcCC-ceEEEEEcCCcEEEcCEEEE
Q 022277 137 RELRSFGFKDE---DASQEVRAVERRILLETLAN---QLP-PESVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIG 208 (300)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~i~~~~l~~~l~~---~~~-g~~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~ 208 (300)
.+.+... ..........+.++.+.+.. ... +..++++++|++++.+++ +.|.|.+++|++++||.||+
T Consensus 73 ----~~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~ 148 (542)
T 1w4x_A 73 ----CYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIM 148 (542)
T ss_dssp ----SCCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred ----ccccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEE
Confidence 0000000 00000112345555555543 331 467999999999998754 45779999998899999999
Q ss_pred cCCCChHh
Q 022277 209 CDGIRSPI 216 (300)
Q Consensus 209 A~G~~s~~ 216 (300)
|+|.+|..
T Consensus 149 AtG~~s~p 156 (542)
T 1w4x_A 149 ASGQLSVP 156 (542)
T ss_dssp CCCSCCCC
T ss_pred CcCCCCCC
Confidence 99987743
No 77
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.37 E-value=5.3e-13 Score=121.45 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=43.1
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEc-CCceEEEEEcCC-c--EEEcC-EEEEcCCCChH
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETS-GNGVTILELVNG-T--RIYAN-IVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~--~~~ad-~vV~A~G~~s~ 215 (300)
.+.+.|.+.+ .|++|+++++|+++..+ ++.+++|.+.++ + ++.|+ .||+|+|.++.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 5666665554 48999999999999988 566666766543 2 58995 99999999884
No 78
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.37 E-value=3.1e-12 Score=108.85 Aligned_cols=112 Identities=17% Similarity=0.219 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
+||+|||||++|+++|+.|++.|+ +|+|+|+.. + +|.... . ..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~--gg~~~~-~------------------~~-------------- 45 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P--GGQITG-S------------------SE-------------- 45 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T--TCGGGG-C------------------SC--------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C--Cccccc-c------------------cc--------------
Confidence 699999999999999999999999 999999953 2 221000 0 00
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
...+ +.....+.+.++.+.+.+.+ .++++++ ++|++++.+++. +.|.+.+|+.+.+|.||+|+|.++.
T Consensus 46 -~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 46 -IENY-------PGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp -BCCS-------TTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCEEEC
T ss_pred -cccC-------CCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCE-EEEEEcCCCEEECCEEEECCCCCCC
Confidence 0000 00011245556666655444 3788887 789999887765 5577888888999999999998764
Q ss_pred h
Q 022277 216 I 216 (300)
Q Consensus 216 ~ 216 (300)
.
T Consensus 116 ~ 116 (311)
T 2q0l_A 116 R 116 (311)
T ss_dssp C
T ss_pred C
Confidence 4
No 79
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.35 E-value=8.2e-12 Score=110.93 Aligned_cols=56 Identities=14% Similarity=0.111 Sum_probs=44.6
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHh
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~ 216 (300)
.+.+.|.+.+ .|++|+++++|++|..+++++.+|.++ |+++.||.||.|+|.+...
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHH
Confidence 3555555555 489999999999999988776667775 6789999999999987654
No 80
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.35 E-value=4e-12 Score=109.25 Aligned_cols=117 Identities=18% Similarity=0.233 Sum_probs=78.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC--cCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS--LRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~--~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
.+.+||+|||||++|+++|+.|+++|++|+|+|+.+. ...+|.... ..
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~--------------------~~---------- 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT--------------------TT---------- 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG--------------------SS----------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc--------------------ch----------
Confidence 3568999999999999999999999999999999762 111221000 00
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEE---cCCcEEEcCEEEE
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL---VNGTRIYANIVIG 208 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~---~~g~~~~ad~vV~ 208 (300)
.. ..+ +.....+...++.+.+.+.+ .++++++++ |+++..+++. +.+.+ .++..+.+|.||+
T Consensus 70 ----~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~-~~v~~~~~~~~~~~~~d~vvl 136 (338)
T 3itj_A 70 ----EI--ENF-----PGFPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKP-FKLWTEFNEDAEPVTTDAIIL 136 (338)
T ss_dssp ----EE--CCS-----TTCTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSS-EEEEETTCSSSCCEEEEEEEE
T ss_pred ----hh--ccc-----CCCcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCE-EEEEEEecCCCcEEEeCEEEE
Confidence 00 000 00011244556666555544 388999988 9999887766 44666 3667899999999
Q ss_pred cCCCChH
Q 022277 209 CDGIRSP 215 (300)
Q Consensus 209 A~G~~s~ 215 (300)
|+|..+.
T Consensus 137 AtG~~~~ 143 (338)
T 3itj_A 137 ATGASAK 143 (338)
T ss_dssp CCCEEEC
T ss_pred CcCCCcC
Confidence 9998653
No 81
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.34 E-value=9.8e-13 Score=121.24 Aligned_cols=161 Identities=19% Similarity=0.220 Sum_probs=86.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCC----CceeeEc-----------hhHHHHHHHc---C--C-
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLTLF-----------KNGWSVLDAL---G--V- 115 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~----g~~~~~~-----------~~~~~~l~~~---g--~- 115 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.++.. +.++... .....+++.+ + .
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999999876421 1111110 0001111110 1 0
Q ss_pred cHHHHhcccc--ccceEEEcCCCceEEEecC-CCCCCCccee----eecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEc
Q 022277 116 GSDLRSQFLE--IKGMAVKSEDGRELRSFGF-KDEDASQEVR----AVERRILLETLANQL--PPESVQFSSELAKIETS 186 (300)
Q Consensus 116 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~ 186 (300)
...+...... ...+.+....+..+..+.. .......... ......+.+.|.+.+ .|++|+++++|+++..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 0000000000 0000000000000000000 0000000000 022445666666555 48999999999999877
Q ss_pred C-CceEEEEEc--CCc--EEEcCEEEEcCCCChHhh
Q 022277 187 G-NGVTILELV--NGT--RIYANIVIGCDGIRSPIA 217 (300)
Q Consensus 187 ~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~s~~r 217 (300)
+ +.+++|.+. +|+ .+.||.||+|+|.++..+
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 320 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNN 320 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCH
Confidence 6 666666665 564 689999999999988643
No 82
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.34 E-value=6.3e-12 Score=107.65 Aligned_cols=114 Identities=20% Similarity=0.251 Sum_probs=76.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+. .+ +|.... . ..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~--gg~~~~-~------------------~~------------- 51 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP--GGQIAW-S------------------EE------------- 51 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT--TGGGGG-C------------------SC-------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC--Cccccc-c------------------cc-------------
Confidence 4589999999999999999999999999999998 33 221000 0 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEc--CCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETS--GNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
...+ . +. ...+.+.++.+.+.+.+ .++++++ .+|++++.+ ++..+.|.+.+|+.+.+|.||+|+|.
T Consensus 52 --~~~~--~----~~-~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 52 --VENF--P----GF-PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp --BCCS--T----TC-SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred --cccC--C----CC-CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 0000 0 00 01134445555554443 3788887 689999876 44324477778888999999999998
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
++.
T Consensus 122 ~~~ 124 (325)
T 2q7v_A 122 DPR 124 (325)
T ss_dssp EEC
T ss_pred CcC
Confidence 654
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.34 E-value=7.7e-12 Score=112.42 Aligned_cols=149 Identities=16% Similarity=0.209 Sum_probs=81.9
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCc---EEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEE
Q 022277 59 EDIVIVGAGIAGLATAVSLQR---LGIG---SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~---~G~~---V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 132 (300)
+||+|||||++|+++|..|++ .|++ |+|||+.+.++ |. +......- ....++.. ....+......
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G--G~-w~~~~~~g--~~~~g~~~----~~~~y~~l~~~ 73 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG--GQ-WNYTWRTG--LDENGEPV----HSSMYRYLWSN 73 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC--GG-GSCCSCCS--BCTTSSBC----CCCCCTTCBCS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC--CE-eecCCCCC--ccccCCCC----cCccccchhhc
Confidence 699999999999999999999 9999 99999998763 21 10000000 00000000 00000000000
Q ss_pred cCCC-ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCe--EEeCCeEEEEEEcCC-ceEEEEEcC---C--cEE
Q 022277 133 SEDG-RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPES--VQFSSELAKIETSGN-GVTILELVN---G--TRI 201 (300)
Q Consensus 133 ~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~--i~~~~~v~~i~~~~~-~~~~v~~~~---g--~~~ 201 (300)
.... ..+..+++...........+.+..+.+.+.+.+ .+++ ++++++|++++..++ +.|.|++.+ | .++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~ 153 (464)
T 2xve_A 74 GPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSE 153 (464)
T ss_dssp SCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEE
Confidence 0000 000000000000000022355667766666544 2666 999999999988765 246677765 4 478
Q ss_pred EcCEEEEcCCCChHh
Q 022277 202 YANIVIGCDGIRSPI 216 (300)
Q Consensus 202 ~ad~vV~A~G~~s~~ 216 (300)
.+|.||+|+|.+|..
T Consensus 154 ~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 154 EFDYVVCCTGHFSTP 168 (464)
T ss_dssp EESEEEECCCSSSSB
T ss_pred EcCEEEECCCCCCCC
Confidence 999999999976644
No 84
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.33 E-value=2.8e-12 Score=110.17 Aligned_cols=114 Identities=21% Similarity=0.211 Sum_probs=77.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC----CCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA----DSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~----~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 132 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+. ... +|. +.... ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~--gg~--------------------~~~~~------~~~ 58 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAP--GGQ--------------------LTTTT------DVE 58 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCT--TCG--------------------GGGCS------EEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCC--Cce--------------------eeecc------ccc
Confidence 4589999999999999999999999999999982 221 111 00000 000
Q ss_pred cCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcC
Q 022277 133 SEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCD 210 (300)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~ 210 (300)
.+ +.....+.+.++.+.+.+.+ .++++++++ |++++.+++. +.|.+ +|..+.+|.||+|+
T Consensus 59 ----------~~-----~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~~v~~-~~~~~~~~~vv~A~ 120 (333)
T 1vdc_A 59 ----------NF-----PGFPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-FKLFT-DSKAILADAVILAI 120 (333)
T ss_dssp ----------CS-----TTCTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-EEEEC-SSEEEEEEEEEECC
T ss_pred ----------cC-----CCCccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-EEEEE-CCcEEEcCEEEECC
Confidence 00 00001244556666665544 478999887 9999877665 44777 77789999999999
Q ss_pred CCChHh
Q 022277 211 GIRSPI 216 (300)
Q Consensus 211 G~~s~~ 216 (300)
|.++..
T Consensus 121 G~~~~~ 126 (333)
T 1vdc_A 121 GAVAKR 126 (333)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987654
No 85
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.32 E-value=1.2e-11 Score=111.67 Aligned_cols=63 Identities=22% Similarity=0.353 Sum_probs=47.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceee------------E---chhHHHHHHHcCCcHHH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLT------------L---FKNGWSVLDALGVGSDL 119 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~------------~---~~~~~~~l~~~g~~~~~ 119 (300)
..+||+|||||++||++|+.|+++|++|+|+|+++.++..-.+.. + .+...++++++|+.+.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 568999999999999999999999999999999987742111110 1 24567888899886443
No 86
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.31 E-value=2.3e-11 Score=112.49 Aligned_cols=163 Identities=23% Similarity=0.224 Sum_probs=88.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcCC------CCceeeEch-hHH-----HHHHHc-CCc-HHHH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRT------GGTSLTLFK-NGW-----SVLDAL-GVG-SDLR 120 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~~~------~g~~~~~~~-~~~-----~~l~~~-g~~-~~~~ 120 (300)
..+||+|||||++||++|+.|++.| .+|+||||...... +|....+.. .++ +.++.- ++. ....
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4589999999999999999999999 99999999864421 111111111 111 111110 110 0000
Q ss_pred hcc----------ccccceEEEc-CCCceEEEecCCCCCCCcceee--ecHHHHHHHHHhcC--CC-CeEEeCCeEEEEE
Q 022277 121 SQF----------LEIKGMAVKS-EDGRELRSFGFKDEDASQEVRA--VERRILLETLANQL--PP-ESVQFSSELAKIE 184 (300)
Q Consensus 121 ~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--i~~~~l~~~l~~~~--~g-~~i~~~~~v~~i~ 184 (300)
... ....++.+.. ..+... ...+.........+. .....+.+.|.+.+ .+ ++|+++++|+++.
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~-~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVN-VRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBC-CBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCccc-ccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 000 0000111111 111100 000000000000000 11346667776655 35 8999999999999
Q ss_pred EcCCceEEEEE---cCCc--EEEcCEEEEcCCCChHhhhhc
Q 022277 185 TSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPIAKWI 220 (300)
Q Consensus 185 ~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~s~~r~~~ 220 (300)
.+++.+.+|.. .+|+ .+.|+.||+|+|.+|.++...
T Consensus 163 ~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 163 VDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 88776555543 5675 689999999999999876544
No 87
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=2.1e-11 Score=112.49 Aligned_cols=159 Identities=23% Similarity=0.303 Sum_probs=86.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC------CCceeeEch---hHHH-----HHHHc-CCc-HHHH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLFK---NGWS-----VLDAL-GVG-SDLR 120 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~------~g~~~~~~~---~~~~-----~l~~~-g~~-~~~~ 120 (300)
..+||+|||||++||++|+.|++.|.+|+|+||....+. +|....+.. .+.+ .++.- ++. .++.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 458999999999999999999999999999999875421 111111111 1111 11111 111 1110
Q ss_pred hcc----------ccccceEEEc-CCCceEEEecCCCCC-------CCcceee--ecHHHHHHHHHhcC--CCCeEEeCC
Q 022277 121 SQF----------LEIKGMAVKS-EDGRELRSFGFKDED-------ASQEVRA--VERRILLETLANQL--PPESVQFSS 178 (300)
Q Consensus 121 ~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~--i~~~~l~~~l~~~~--~g~~i~~~~ 178 (300)
... ....++.+.. ..+.... ..+.... .....+. ..-..+.+.|.+.+ .|++|++++
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~-~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~ 164 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQ-RPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCE-ECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEee-eecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCc
Confidence 000 0001111111 1111110 0000000 0000000 11245666665554 489999999
Q ss_pred eEEEEEEc-CCceEEEEE---cCCc--EEEcCEEEEcCCCChHh
Q 022277 179 ELAKIETS-GNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (300)
Q Consensus 179 ~v~~i~~~-~~~~~~v~~---~~g~--~~~ad~vV~A~G~~s~~ 216 (300)
+|+++..+ ++.+.+|.. .+|+ .+.|+.||+|+|.++..
T Consensus 165 ~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 165 YALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 99999986 555666664 4564 68999999999998864
No 88
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.31 E-value=1.7e-11 Score=106.72 Aligned_cols=135 Identities=15% Similarity=0.210 Sum_probs=78.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+||+|||||++|+++|+.|++.|+ +|+|||+.+ ++ +. +...+... .+ ..........
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G--g~-~~~~~~~~------~~----~~~~~~~~~~------ 62 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG--HS-FKHWPKST------RT----ITPSFTSNGF------ 62 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT--HH-HHTSCTTC------BC----SSCCCCCGGG------
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC--Cc-cccCcccc------cc----cCcchhcccC------
Confidence 35899999999999999999999999 999999987 32 11 00000000 00 0000000000
Q ss_pred CceEEEecCCCCCCC----cceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEc
Q 022277 136 GRELRSFGFKDEDAS----QEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGC 209 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A 209 (300)
+. ..+........ .....+.+..+.+.+.+.+ .+++++++++|+++..++++ +.|.+.++ ++.+|.||+|
T Consensus 63 g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~~d~vVlA 138 (369)
T 3d1c_A 63 GM--PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-YTIATTTE-TYHADYIFVA 138 (369)
T ss_dssp TC--CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-CEEEEEEEEC
T ss_pred Cc--hhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-EEEEeCCC-EEEeCEEEEC
Confidence 00 00000000000 0011234445555444333 38899999999999987665 55878777 5999999999
Q ss_pred CCCChH
Q 022277 210 DGIRSP 215 (300)
Q Consensus 210 ~G~~s~ 215 (300)
+|.++.
T Consensus 139 tG~~~~ 144 (369)
T 3d1c_A 139 TGDYNF 144 (369)
T ss_dssp CCSTTS
T ss_pred CCCCCc
Confidence 998763
No 89
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.29 E-value=1.4e-12 Score=116.21 Aligned_cols=51 Identities=20% Similarity=0.403 Sum_probs=40.0
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
.+.+.+.+.. + +|+++++|++|+.+++++ .|.+.+|++++||.||+|+|..
T Consensus 208 ~l~~~~~~~~-g-~i~~~~~V~~i~~~~~~v-~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEI-P-EIRLQTVVTGIDQSGDVV-NVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTC-S-CEESSCCEEEEECSSSSE-EEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhC-C-ceEeCCEEEEEEEcCCeE-EEEECCCCEEEeCEEEEecCcc
Confidence 3344444443 5 999999999999887774 4889898889999999999953
No 90
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.29 E-value=1.8e-11 Score=104.09 Aligned_cols=112 Identities=25% Similarity=0.324 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
++||+|||||++|+++|..|++.|++|+|+|+.. +|.... . ..+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~----gG~~~~--------------------~------~~~~----- 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF----GGQILD--------------------T------VDIE----- 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST----TGGGGG--------------------C------CEEC-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC----Cceecc--------------------c------cccc-----
Confidence 3799999999999999999999999999998642 221000 0 0000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCC--ceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGN--GVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~--~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
.+ .......+..+.+.+.+.+ .+++++++++|+.+..+.+ +.+.|.+++|+.+.+|.||+|+|.+
T Consensus 46 ---~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 46 ---NY--------ISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp ---CB--------TTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred ---cc--------cCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 00 0001133445555554433 3789999999999976532 2466888888889999999999986
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
+.
T Consensus 115 ~~ 116 (310)
T 1fl2_A 115 WR 116 (310)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 91
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.29 E-value=1.7e-11 Score=104.63 Aligned_cols=111 Identities=25% Similarity=0.340 Sum_probs=74.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.. + +|.... . ..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~~~~-~------------------~~------------- 59 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A--GGLTAE-A------------------PL------------- 59 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T--TGGGGG-C------------------SC-------------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C--Cccccc-c------------------ch-------------
Confidence 46899999999999999999999999999999943 2 221000 0 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+..+ + . +..+...++.+.+.+.+ .++++++ .+|++++.+++. +.|.+ ++..+.+|.||+|+|.++
T Consensus 60 --~~~~--~----~--~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 60 --VENY--L----G--FKSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGG-FDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp --BCCB--T----T--BSSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTE-EEEEE-SSSEEEEEEEEECCCEEE
T ss_pred --hhhc--C----C--CcccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCE-EEEEE-CCCEEEeCEEEECCCCCc
Confidence 0000 0 0 01233445555554433 3778887 789999887665 44666 556899999999999865
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 127 ~ 127 (319)
T 3cty_A 127 K 127 (319)
T ss_dssp C
T ss_pred c
Confidence 4
No 92
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.29 E-value=1.1e-11 Score=106.62 Aligned_cols=112 Identities=18% Similarity=0.280 Sum_probs=74.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.. + +|. +.... .
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~-~~~~~-----------------~-------------- 57 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F--GGA-LMTTT-----------------D-------------- 57 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C--SCG-GGSCS-----------------C--------------
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C--CCc-eeccc-----------------h--------------
Confidence 56899999999999999999999999999999752 2 221 00000 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEE-EEcCCcEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTIL-ELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v-~~~~g~~~~ad~vV~A~G~~ 213 (300)
...+ +.....+.+.++.+.+.+.+ .++++++++ |++++. ++. +.| .+.+|+.+.+|.||+|+|.+
T Consensus 58 --~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 58 --VENY-------PGFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGP-LKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp --BCCS-------TTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-SEEEEETTSCEEEEEEEEECCCEE
T ss_pred --hhhc-------CCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-EEEEEeCCCCEEEeCEEEECCCCC
Confidence 0000 00001134445555554433 378999887 888877 333 446 77788889999999999986
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
+.
T Consensus 126 ~~ 127 (335)
T 2a87_A 126 AR 127 (335)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 93
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=111.74 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=41.1
Q ss_pred HHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 161 LLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 161 l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+.+.|.+.+ .|++|+++++|++|+.++++++.|.++ +.++.||.||+|++.+.
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHH
Confidence 555555554 378999999999999877665667664 44799999999998754
No 94
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.28 E-value=2e-11 Score=106.22 Aligned_cols=35 Identities=26% Similarity=0.560 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 46899999999999999999999999999999976
No 95
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.28 E-value=1.6e-11 Score=109.04 Aligned_cols=58 Identities=16% Similarity=0.286 Sum_probs=43.7
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHhhhhcC
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPIAKWIG 221 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~r~~~g 221 (300)
.+.+.|.+.+ .|++|+++++|++|..++++ + | +.+|+++.||.||+|+|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKK-V-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTE-E-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCE-E-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 4555555544 48999999999999987776 4 5 5567789999999999987643 3444
No 96
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.28 E-value=2.2e-11 Score=111.26 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++||++|+.|++ |.+|+|+||.+..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 46899999999999999999999 9999999998764
No 97
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.28 E-value=4.9e-11 Score=110.41 Aligned_cols=159 Identities=23% Similarity=0.252 Sum_probs=88.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC------CCceeeEc---hhHHHH-----HHHc-CCc-HHHH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLF---KNGWSV-----LDAL-GVG-SDLR 120 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~------~g~~~~~~---~~~~~~-----l~~~-g~~-~~~~ 120 (300)
..+||||||||++||++|+.|++.|.+|+|+||....+. +|....+. ..+++. ++.- ++. .+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 458999999999999999999999999999999865321 11111111 122221 1110 111 1100
Q ss_pred hcc----------ccccceEEEc-CCCceEEEecCCCCCCC--------cceee--ecHHHHHHHHHhcC--CCCeEEeC
Q 022277 121 SQF----------LEIKGMAVKS-EDGRELRSFGFKDEDAS--------QEVRA--VERRILLETLANQL--PPESVQFS 177 (300)
Q Consensus 121 ~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~--i~~~~l~~~l~~~~--~g~~i~~~ 177 (300)
... ....++.+.. ..+..... .+...... ...+. .....+...|.+.+ .|++|+++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~-~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~ 175 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQR-AFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE 175 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEE-CCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceecc-ccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEc
Confidence 000 0001111111 11111100 00000000 00000 12346777776665 48999999
Q ss_pred CeEEEEEEcCCceEEEEE---cCCc--EEEcCEEEEcCCCChHh
Q 022277 178 SELAKIETSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (300)
Q Consensus 178 ~~v~~i~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~s~~ 216 (300)
+.|+++..+++.+.+|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 176 ~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 176 YFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred eEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 999999887776666655 3565 68999999999998864
No 98
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.27 E-value=2.8e-11 Score=108.94 Aligned_cols=61 Identities=13% Similarity=0.032 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEc-CCcEEEcCEEEEcCCCChHhhhh
Q 022277 158 RRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NGTRIYANIVIGCDGIRSPIAKW 219 (300)
Q Consensus 158 ~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g~~~~ad~vV~A~G~~s~~r~~ 219 (300)
...+.+.|.+.+ .|++++++++| ++..+++.+.+|... ++..+.+|.||+|+|.++.+...
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCcc
Confidence 345666665544 48999999999 998877766556553 22357899999999999977543
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.27 E-value=1.7e-11 Score=104.60 Aligned_cols=112 Identities=19% Similarity=0.327 Sum_probs=74.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.. + +|. +... . .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~-~~~~------------------~--~----------- 48 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-K--GGQ-LTTT------------------T--E----------- 48 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-T--TGG-GGGC------------------S--B-----------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-C--Cce-Eecc------------------h--h-----------
Confidence 45899999999999999999999999999999652 2 221 0000 0 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+ +.....+.+..+.+.+.+.+ .++++++++ ++.++.+++. +.+ +.++..+.+|.||+|+|..+
T Consensus 49 --~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~-~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 49 --VENW-------PGDPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRP-FRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp --CCCS-------TTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-EEE-EESSCEEEEEEEEECCCEEE
T ss_pred --hhhC-------CCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCE-EEE-EeCCCEEEcCEEEECCCCCc
Confidence 0000 00001133445555544433 378998886 8888876665 445 66777899999999999865
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 117 ~ 117 (320)
T 1trb_A 117 R 117 (320)
T ss_dssp C
T ss_pred C
Confidence 3
No 100
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.27 E-value=3.9e-11 Score=102.11 Aligned_cols=36 Identities=36% Similarity=0.495 Sum_probs=33.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|||+||||||+|+++|+.|+++|++|+|+|+..
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 357999999999999999999999999999999864
No 101
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.27 E-value=5.2e-11 Score=107.39 Aligned_cols=54 Identities=20% Similarity=0.203 Sum_probs=43.9
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+.+.|.+.+..++|+++++|++|+.++++ +.|++.+| ++.||.||+|++.+..
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~ad~vV~a~p~~~~ 290 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGR-YRLKTDHG-PEYADYVLLTIPHPQV 290 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTE-EEEECTTC-CEEESEEEECSCHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCE-EEEEECCC-eEECCEEEECCCHHHH
Confidence 456666666644799999999999988777 55888888 7999999999987653
No 102
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.26 E-value=8.3e-11 Score=107.28 Aligned_cols=53 Identities=19% Similarity=0.180 Sum_probs=42.4
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
.+.+.|.+.+ |++|+++++|++|+.+++++. |.+.+|+++.||.||+|.+...
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTRENVL-VETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSSSSEE-EEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECCCeEE-EEECCCeEEEeCEEEECCCHHH
Confidence 3444454444 678999999999998877744 8899998999999999999765
No 103
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.25 E-value=3.4e-11 Score=109.73 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 158 RRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 158 ~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+.+.|.+.+++.+|+++++|++|..+++..+.|++.+|++++||.||+|.+...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~ 257 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSV 257 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHH
Confidence 455666777776556899999999999864333668999998899999999998654
No 104
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.25 E-value=2.9e-11 Score=110.04 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=41.5
Q ss_pred HHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 159 RILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 159 ~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
..+.+.|.+.+ .|++|+++++|++|..+++. +++.+|+++.||.||.+.-.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCH
Confidence 46778888777 37889999999999877655 67889999999999977653
No 105
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.24 E-value=5.5e-11 Score=101.14 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=72.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCC--CCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~--~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+||||||||+++|+.|+++|++|+|+|+....+. +|. + + ....+.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~--------------------~-----~-~~~~i~~- 55 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQ--------------------L-----T-TTTIIEN- 55 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCG--------------------G-----G-GSSEECC-
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCC--------------------c-----C-ChHHhhh-
Confidence 358999999999999999999999999999998763211 111 0 0 0000000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
+ . + ....+...++.+.+.+.+ .+..+.. ..+.......+. ..+.+.++..+.+|.||+|+|.
T Consensus 56 -------~--~----g-~~~~i~~~~l~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~-~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 56 -------F--P----G-FPNGIDGNELMMNMRTQSEKYGTTIIT-ETIDHVDFSTQP-FKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp -------S--T----T-CTTCEEHHHHHHHHHHHHHHTTCEEEC-CCEEEEECSSSS-EEEEETTCCEEEEEEEEECCCE
T ss_pred -------c--c----C-CcccCCHHHHHHHHHHHHhhcCcEEEE-eEEEEeecCCCc-eEEEECCCeEEEEeEEEEcccc
Confidence 0 0 0 001234445555544433 2556654 456666655555 3367788889999999999997
Q ss_pred Ch
Q 022277 213 RS 214 (300)
Q Consensus 213 ~s 214 (300)
..
T Consensus 120 ~~ 121 (314)
T 4a5l_A 120 TA 121 (314)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 106
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.23 E-value=7.6e-11 Score=106.86 Aligned_cols=55 Identities=7% Similarity=0.064 Sum_probs=42.6
Q ss_pred HHHHHHHhcC--CC-CeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 160 ILLETLANQL--PP-ESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~--~g-~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+.+.|.+.+ .| ++|+++++|++|+.++++ +.|.+.+|+++.||.||+|+|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHHHH
Confidence 3444555544 24 779999999999987776 4588888888999999999997553
No 107
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.23 E-value=1.1e-10 Score=108.78 Aligned_cols=57 Identities=19% Similarity=0.067 Sum_probs=44.0
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEE---cCCc--EEEcCEEEEcCCCChHh
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~s~~ 216 (300)
.+...|.+.+ .|++|++++.|+++..+++.+.+|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5666666555 38999999999999887666555554 4565 58999999999998854
No 108
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.22 E-value=5.4e-11 Score=108.43 Aligned_cols=114 Identities=25% Similarity=0.324 Sum_probs=78.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
...+||+|||||++|+++|+.|++.|++|+|+|+.. +|.... ..++.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~----GG~~~~----------~~~~~------------------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF----GGQVLD----------TVDIE------------------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST----TGGGTT----------CSCBC-------------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC----CCcccc----------ccccc-------------------
Confidence 357899999999999999999999999999999632 221000 00000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcC--CceEEEEEcCCcEEEcCEEEEcCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILELVNGTRIYANIVIGCDG 211 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~~ad~vV~A~G 211 (300)
.+ .........++.+.+.+.+ .+++++.+++|+.+..+. ++.+.|.+.+|..+.+|.||+|+|
T Consensus 257 -----~~--------~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG 323 (521)
T 1hyu_A 257 -----NY--------ISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATG 323 (521)
T ss_dssp -----CB--------TTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCC
T ss_pred -----cc--------CCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCC
Confidence 00 0001133445555554443 388999999999997542 234668888888899999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
.++.
T Consensus 324 ~~~~ 327 (521)
T 1hyu_A 324 AKWR 327 (521)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8653
No 109
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.21 E-value=6.4e-11 Score=106.46 Aligned_cols=146 Identities=18% Similarity=0.131 Sum_probs=80.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-----CcEEEEecCCCcCCCCc----eeeEchhHHHHHHHcCCcHHHHhcccccc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG-----IGSLVIEQADSLRTGGT----SLTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G-----~~V~viE~~~~~~~~g~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 127 (300)
..+||+|||||++|+++|..|++.| ++|+|||+.+.++.... +..+... +++.+.. +........
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l~~---~~~p~~~~~ 102 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDLVS---LRNPTSPYS 102 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSSST---TTCTTCTTS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhcccc---ccCCCCCCC
Confidence 4579999999999999999999999 99999999987641110 0000000 0000000 000000000
Q ss_pred ceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcC--CceE--EEEEcCCc--
Q 022277 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVT--ILELVNGT-- 199 (300)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~--~~~~--~v~~~~g~-- 199 (300)
...+....+.. ..+ .........+.++.+.+...+ .+++++++++|++++.++ ++.| .|.+.+|+
T Consensus 103 ~~~~l~~~~~~---~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~ 175 (463)
T 3s5w_A 103 FVNYLHKHDRL---VDF----INLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE 175 (463)
T ss_dssp HHHHHHHTTCH---HHH----HHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC
T ss_pred hhHhhhhcCce---eec----ccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc
Confidence 00000000000 000 000011234556666554433 268999999999998762 3333 57777765
Q ss_pred --EEEcCEEEEcCCCChH
Q 022277 200 --RIYANIVIGCDGIRSP 215 (300)
Q Consensus 200 --~~~ad~vV~A~G~~s~ 215 (300)
++.+|.||+|+|....
T Consensus 176 ~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 176 ELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEEESEEEECCCCEEC
T ss_pred eEEEEeCEEEECCCCCCC
Confidence 8999999999998543
No 110
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.18 E-value=1.4e-10 Score=108.27 Aligned_cols=152 Identities=20% Similarity=0.264 Sum_probs=83.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHH---H-cCCcEEEEecCCCcCCC----Cc-eee--Ec-------hhHH-HHHH----H-
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQ---R-LGIGSLVIEQADSLRTG----GT-SLT--LF-------KNGW-SVLD----A- 112 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~---~-~G~~V~viE~~~~~~~~----g~-~~~--~~-------~~~~-~~l~----~- 112 (300)
..+||||||||++||++|+.|+ + .|.+|+|+||......+ |. +.. +. ..+. ..++ .
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 4689999999999999999999 6 89999999998743211 11 111 21 1111 1111 1
Q ss_pred cCCc-HHHHhcc----------ccccceEEEc-CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcC---CCC-eEEe
Q 022277 113 LGVG-SDLRSQF----------LEIKGMAVKS-EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPE-SVQF 176 (300)
Q Consensus 113 ~g~~-~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~---~g~-~i~~ 176 (300)
.++. .++.... ....++.+.. ..+... . .+.....+....+.+.|.+.+ +|+ +|++
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~-----~---~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~ 172 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYV-----R---EGQWQIMIHGESYKPIIAEAAKMAVGEENIYE 172 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBC-----B---SSSSCEEEEETTHHHHHHHHHHHHHCGGGEEC
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCcc-----C---CCccccCCCcHHHHHHHHHHHHhcCCCcEEEe
Confidence 1111 1110000 0001111111 111100 0 000001122223344444333 289 9999
Q ss_pred CCeEEEEEEcCC---ceEEEEE---cCCc--EEEcCEEEEcCCCChHh
Q 022277 177 SSELAKIETSGN---GVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (300)
Q Consensus 177 ~~~v~~i~~~~~---~~~~v~~---~~g~--~~~ad~vV~A~G~~s~~ 216 (300)
++.|+++..+++ .+.+|.. .+|+ .+.|+.||+|+|.++..
T Consensus 173 ~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 173 RVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp SEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 999999998766 7666654 4565 68999999999998853
No 111
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.16 E-value=2.8e-10 Score=96.69 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=72.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEE-EecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLV-IEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~v-iE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
.++||+|||||++|+++|..|+++|++|+| +|+ +.+ +|.... . ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~--gG~~~~-~------------------~~------------ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMP--GGQITS-S------------------SE------------ 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SST--TGGGGG-C------------------SC------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCC--Cceeee-e------------------ce------------
Confidence 468999999999999999999999999999 999 433 221000 0 00
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcC--CceEEEEE-cCCcEEEcCEEEEcC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILEL-VNGTRIYANIVIGCD 210 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~--~~~~~v~~-~~g~~~~ad~vV~A~ 210 (300)
.. .+ +.....+...++...+.+.+ .+++++++ +|+++ .++ +. +.+.+ .++ .+.+|.||+|+
T Consensus 49 ---~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~-~~v~~~~~~-~~~~d~lvlAt 114 (315)
T 3r9u_A 49 ---IE--NY-----PGVAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGS-FTIKLEGGK-TELAKAVIVCT 114 (315)
T ss_dssp ---BC--CS-----TTCCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSC-EEEEETTSC-EEEEEEEEECC
T ss_pred ---ec--cC-----CCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCc-EEEEEecCC-EEEeCEEEEee
Confidence 00 00 00011244556666665544 37888888 88888 655 44 54423 334 89999999999
Q ss_pred CCCh
Q 022277 211 GIRS 214 (300)
Q Consensus 211 G~~s 214 (300)
|...
T Consensus 115 G~~~ 118 (315)
T 3r9u_A 115 GSAP 118 (315)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9744
No 112
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.15 E-value=1.1e-10 Score=103.82 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=72.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
+.+||+|||||++|+++|..|++.|. +|+|+|+.+....... + +...+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~----------l~~~~~~------------- 54 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP-----P----------LSKAYLA------------- 54 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG-----G----------GGTTTTT-------------
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC-----C----------CcHHHhC-------------
Confidence 35899999999999999999999998 7999998875321000 0 0000000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+. ....... .. +.+.+.+. +++++++++|+.++.++.. |.+.+|+.+.+|.||+|+|..+
T Consensus 55 -~~----------~~~~~~~-~~---~~~~~~~~--gv~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 55 -GK----------ATAESLY-LR---TPDAYAAQ--NIQLLGGTQVTAINRDRQQ---VILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp -TC----------SCSGGGB-SS---CHHHHHHT--TEEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -CC----------CChHHhc-cc---CHHHHHhC--CCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEcCCCCc
Confidence 00 0000000 00 11222222 8899999999999876543 7778888899999999999865
Q ss_pred Hh
Q 022277 215 PI 216 (300)
Q Consensus 215 ~~ 216 (300)
..
T Consensus 115 ~~ 116 (431)
T 1q1r_A 115 RP 116 (431)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 113
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.15 E-value=2.2e-10 Score=100.42 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=73.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
+..+|+|||||++|+++|..|...+.+|+|+|+.+...... +.....+ .....
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~------~~l~~~l----------~g~~~----------- 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR------PRLNEII----------AKNKS----------- 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG------GGHHHHH----------HSCCC-----------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc------ChhhHHH----------cCCCC-----------
Confidence 57899999999999999999977799999999998653110 0000000 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
..... .. ..+.+.+. +++++++++|++++.++.. |.+++|+++.+|.||+|+|...
T Consensus 61 -------------~~~l~-~~---~~~~~~~~--~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 61 -------------IDDIL-IK---KNDWYEKN--NIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp -------------GGGTB-SS---CHHHHHHT--TCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -------------HHHcc-CC---CHHHHHHC--CCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCCCc
Confidence 00000 00 11122222 8899999999999876654 7888998999999999999743
No 114
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.14 E-value=1e-09 Score=98.30 Aligned_cols=38 Identities=42% Similarity=0.670 Sum_probs=35.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
..+||+|||||++||++|+.|++.|++|+|+|+++.++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 45799999999999999999999999999999998774
No 115
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.12 E-value=1.7e-09 Score=95.81 Aligned_cols=101 Identities=24% Similarity=0.342 Sum_probs=78.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+..... ...+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~-----------------~~~~------------------ 196 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVA-----------------GEAL------------------ 196 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS-----------------CHHH------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhc-----------------CHHH------------------
Confidence 57899999999999999999999999999999987632100 0000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
...+.+.+.+. |++++++++|++++.+++++..|.+.+|+++.||.||.|+|....
T Consensus 197 --------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 197 --------------------SEFYQAEHRAH--GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp --------------------HHHHHHHHHHT--TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred --------------------HHHHHHHHHhC--CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 01222333332 999999999999998777776799999999999999999998653
No 116
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.12 E-value=4.8e-10 Score=98.26 Aligned_cols=108 Identities=21% Similarity=0.320 Sum_probs=80.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||++|+.+|..|++.|.+|+|+|+.+.+..... ...
T Consensus 144 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~-----------------~~~------------------ 188 (384)
T 2v3a_A 144 GKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLL-----------------HPA------------------ 188 (384)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTS-----------------CHH------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhccc-----------------CHH------------------
Confidence 367999999999999999999999999999999886522100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP- 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~- 215 (300)
-...+.+.+.+ .|++++++++|++++.++++ +.|.+.+|+++++|.||+|+|..+.
T Consensus 189 --------------------~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 189 --------------------AAKAVQAGLEG--LGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp --------------------HHHHHHHHHHT--TTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEECC
T ss_pred --------------------HHHHHHHHHHH--cCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCCcCH
Confidence 01123333333 38999999999999887665 4588889989999999999998764
Q ss_pred -hhhhcCC
Q 022277 216 -IAKWIGF 222 (300)
Q Consensus 216 -~r~~~g~ 222 (300)
+.+.+|+
T Consensus 246 ~l~~~~g~ 253 (384)
T 2v3a_A 246 ELAFAAGL 253 (384)
T ss_dssp HHHHHTTC
T ss_pred HHHHHCCC
Confidence 3444444
No 117
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.12 E-value=8.8e-10 Score=98.74 Aligned_cols=55 Identities=9% Similarity=-0.041 Sum_probs=43.0
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEc--CCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETS--GNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+.+.|.+.+ .|++|+++++|++|..+ ++++++|.+ +|+++.||.||.|.|.++.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4455555444 48899999999999987 666666776 4778999999999999864
No 118
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.11 E-value=2e-10 Score=106.97 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL------GIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~------G~~V~viE~~~~~ 93 (300)
..+||||||||++||++|+.|+++ |.+|+||||....
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 468999999999999999999998 9999999998643
No 119
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.11 E-value=6.4e-10 Score=100.58 Aligned_cols=54 Identities=15% Similarity=0.291 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC---cEEEcCEEEEcCCCC
Q 022277 159 RILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG---TRIYANIVIGCDGIR 213 (300)
Q Consensus 159 ~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g---~~~~ad~vV~A~G~~ 213 (300)
..|.+.|.+.+...+|+++++|++|+.++++ +.|.+.+| ++++||.||+|....
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEECCCHH
Confidence 4567777776633689999999999998887 44888776 579999999999764
No 120
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.10 E-value=2e-09 Score=95.45 Aligned_cols=38 Identities=34% Similarity=0.594 Sum_probs=35.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G-~~V~viE~~~~~~ 94 (300)
..+||+|||||++||++|+.|+++| .+|+|+|+++.++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 5689999999999999999999999 8999999998774
No 121
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.10 E-value=1.5e-09 Score=96.86 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEE-cCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIET-SGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
++.+.|.+.+ .|++|+++++|++|.. +++++++|.+.+|+++.||.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 3444444444 4899999999999998 5667788999999899999999999976
No 122
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.10 E-value=1.2e-10 Score=104.34 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=67.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+|||||++|+++|+.|++. |.+|+|+|+.+....... .+. ..+ .
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--~~p-------------~~~-~------------- 52 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--GIP-------------YVV-E------------- 52 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC----------------------------------------
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--CCc-------------ccc-C-------------
Confidence 357999999999999999999998 889999999986521110 000 000 0
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC-cEEEcCEEEEcCCCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG-TRIYANIVIGCDGIR 213 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~~ad~vV~A~G~~ 213 (300)
+. ....... . ...+.+.+. .+++++++++|++++.+. +.|.+.++ ..+.+|.||+|+|..
T Consensus 53 -~~----------~~~~~~~--~--~~~~~~~~~-~gi~v~~~~~v~~i~~~~---~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 53 -GL----------STPDKLM--Y--YPPEVFIKK-RGIDLHLNAEVIEVDTGY---VRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp ----------------------------CTHHHH-TTCEEETTCEEEEECSSE---EEEECSSSEEEEECSEEEECCCEE
T ss_pred -CC----------CCHHHhh--h--cCHHHHHHh-cCcEEEecCEEEEEecCC---CEEEECCceEEEEcCEEEECCCCC
Confidence 00 0000000 0 000111111 288999999999885433 34677777 479999999999965
Q ss_pred h
Q 022277 214 S 214 (300)
Q Consensus 214 s 214 (300)
.
T Consensus 114 p 114 (449)
T 3kd9_A 114 P 114 (449)
T ss_dssp E
T ss_pred C
Confidence 4
No 123
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.09 E-value=8e-10 Score=99.09 Aligned_cols=101 Identities=22% Similarity=0.332 Sum_probs=77.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+... .++
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~~------------------~~~----------------- 210 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMD------------------LEV----------------- 210 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSC------------------HHH-----------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccccC------------------HHH-----------------
Confidence 357899999999999999999999999999999886522100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~ 216 (300)
...+.+.+.+. |++++++++|++++.++++ +.+.+.+|+++.+|.||+|+|..+..
T Consensus 211 ---------------------~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 211 ---------------------SRAAERVFKKQ--GLTIRTGVRVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ---------------------HHHHHHHHHHH--TCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEECC
T ss_pred ---------------------HHHHHHHHHHC--CCEEEECCEEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCCcCC
Confidence 11233334333 8999999999999987665 44777788889999999999987653
No 124
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.09 E-value=2.1e-09 Score=94.79 Aligned_cols=109 Identities=21% Similarity=0.318 Sum_probs=81.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|.+.|.+|+++|+.+.+..... ...
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~-----------------~~~------------------ 185 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV-----------------TPE------------------ 185 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS-----------------CHH------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc-----------------CHH------------------
Confidence 357899999999999999999999999999999886521100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP- 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~- 215 (300)
-...+.+.+.+. |++++++++|++++.+++++..|.+.+|+++.||.||.|+|....
T Consensus 186 --------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 186 --------------------ISSYFHDRHSGA--GIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECC
T ss_pred --------------------HHHHHHHHHHhC--CcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCH
Confidence 001222333332 899999999999998777777799999999999999999998543
Q ss_pred -hhhhcCC
Q 022277 216 -IAKWIGF 222 (300)
Q Consensus 216 -~r~~~g~ 222 (300)
+.+.+|+
T Consensus 244 ~l~~~~gl 251 (404)
T 3fg2_P 244 EIAAAAGL 251 (404)
T ss_dssp HHHHHTTC
T ss_pred HHHHhCCC
Confidence 3444443
No 125
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.09 E-value=4.2e-10 Score=99.49 Aligned_cols=108 Identities=12% Similarity=0.171 Sum_probs=71.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+|||||++|+++|..|++.|. +|+|+|+.+....... +-...++.. .. ...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~~~~~~~~~---------~~--~~~------ 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-----PLSKDFMAH---------GD--AEK------ 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-----GGGTHHHHH---------CC--GGG------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-----CCCHHHhCC---------Cc--hhh------
Confidence 56899999999999999999999998 4999999875421100 000001100 00 000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
. .+. ..+. .+++++++++|+.++.+... |.+.+|+++.+|.||+|+|...
T Consensus 64 ------------------~-~~~-------~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 64 ------------------I-RLD-------CKRA-PEVEWLLGVTAQSFDPQAHT---VALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ------------------S-BCC-------CTTS-CSCEEEETCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred ------------------h-hHH-------HHHH-CCCEEEcCCEEEEEECCCCE---EEECCCCEEECCEEEECCCCCC
Confidence 0 000 0011 27899999999999865433 7778888899999999999865
Q ss_pred Hh
Q 022277 215 PI 216 (300)
Q Consensus 215 ~~ 216 (300)
..
T Consensus 114 ~~ 115 (408)
T 2gqw_A 114 RA 115 (408)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 126
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.09 E-value=6.7e-10 Score=98.22 Aligned_cols=107 Identities=18% Similarity=0.310 Sum_probs=71.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCc--EEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIG--SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~--V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+....... + +...+......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-----~----------l~~~~~~g~~~----------- 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-----S----------LSKAVLDGSLE----------- 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-----G----------GGTHHHHTSSS-----------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-----c----------ccHHHhCCCCC-----------
Confidence 5899999999999999999999987 999999886521100 0 00111100000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
.... .... +.+.+. +++++++++|+.+..+... |.+.+|+++.+|.||+|+|...
T Consensus 57 -------------~~~~--~~~~---~~~~~~--~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 57 -------------RPPI--LAEA---DWYGEA--RIDMLTGPEVTALDVQTRT---ISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp -------------SCCB--SSCT---THHHHT--TCEEEESCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -------------HHHh--cCCH---HHHHHC--CCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEccCCcc
Confidence 0000 0001 111122 8899999999999876543 7788888999999999999753
No 127
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.08 E-value=5.5e-10 Score=98.92 Aligned_cols=110 Identities=21% Similarity=0.367 Sum_probs=72.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc--EEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIG--SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~--V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+|||||++|+++|..|+++|.+ |+|+|+.+.+..... .+......
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-------------------~l~~~~~~--------- 59 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-------------------PLSKEYLA--------- 59 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-------------------GGGTTTTT---------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-------------------cCCHHHHc---------
Confidence 468999999999999999999999987 999999886421100 00000000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+ ........ ... .+.+.+ .+++++.+++|+.+..+... |.+.+|+.+.+|.||+|+|...
T Consensus 60 -~----------~~~~~~~~-~~~---~~~~~~--~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 60 -R----------EKTFERIC-IRP---AQFWED--KAVEMKLGAEVVSLDPAAHT---VKLGDGSAIEYGKLIWATGGDP 119 (415)
T ss_dssp -T----------SSCSGGGB-SSC---HHHHHH--TTEEEEETCCEEEEETTTTE---EEETTSCEEEEEEEEECCCEEC
T ss_pred -C----------CCCHHHhc-cCC---HHHHHH--CCcEEEeCCEEEEEECCCCE---EEECCCCEEEeeEEEEccCCcc
Confidence 0 00000000 111 111222 27899999999999776543 7788888999999999999643
No 128
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.08 E-value=8.2e-10 Score=98.85 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=78.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+. +...
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------ 209 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------FDPM------------------ 209 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------hhHH------------------
Confidence 3579999999999999999999999999999998765210 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~ 216 (300)
....+.+.|.+. |++++++++|++++.++++.+.|.+.+|+++.+|.||+|+|..+..
T Consensus 210 --------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 210 --------------------ISETLVEVMNAE--GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp --------------------HHHHHHHHHHHH--SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 011333444443 8999999999999886655455888899889999999999987643
No 129
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.08 E-value=7.1e-10 Score=98.91 Aligned_cols=109 Identities=16% Similarity=0.242 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..||+|||||++|+++|..|++ .|++|+|||+.+.... .+....... +. ..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~~--g~--------~~--------- 57 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNPWVGV--GW--------KE--------- 57 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHHHHHH--TS--------SC---------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCcccccc--Cc--------cC---------
Confidence 4799999999999999999999 8999999999885311 111000000 00 00
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
..... . .+.+.+.+ .+++++ ..+|++++.+++. |.+++|+++.+|.||+|+|..+
T Consensus 58 ---------------~~~~~-~---~l~~~~~~--~gv~~~-~~~v~~id~~~~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 58 ---------------RDDIA-F---PIRHYVER--KGIHFI-AQSAEQIDAEAQN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp ---------------HHHHE-E---ECHHHHHT--TTCEEE-CSCEEEEETTTTE---EEETTSCEEECSEEEECCCCEE
T ss_pred ---------------HHHHH-H---HHHHHHHH--CCCEEE-EeEEEEEEcCCCE---EEECCCCEEECCEEEECCCCCc
Confidence 00000 0 01122222 278887 4689999876553 7888888899999999999866
Q ss_pred Hhh
Q 022277 215 PIA 217 (300)
Q Consensus 215 ~~r 217 (300)
...
T Consensus 113 ~~~ 115 (437)
T 3sx6_A 113 AFE 115 (437)
T ss_dssp CGG
T ss_pred Ccc
Confidence 543
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.06 E-value=6.6e-10 Score=99.53 Aligned_cols=112 Identities=17% Similarity=0.188 Sum_probs=70.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.||+|||||++|+++|..|+++ |.+|+|+|+.+.++....+...... +
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~------------------------------~ 52 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFN------------------------------H 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhc------------------------------C
Confidence 5999999999999999999998 8999999999865311110000000 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~~~~ad~vV~A~G~~s~ 215 (300)
.. . .......... +.+.+. +++++++++|++++.++.. +.+.. .++..+.+|.||+|+|....
T Consensus 53 ~~----~-----~~~~~~~~~~----~~~~~~--gi~~~~~~~V~~id~~~~~-v~v~~~~~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 53 TI----N-----ELHEARYITE----EELRRQ--KIQLLLNREVVAMDVENQL-IAWTRKEEQQWYSYDKLILATGASQF 116 (452)
T ss_dssp -----------------CCCCH----HHHHHT--TEEEECSCEEEEEETTTTE-EEEEETTEEEEEECSEEEECCCCCBC
T ss_pred CC----C-----CHHHhhcCCH----HHHHHC--CCEEEECCEEEEEECCCCE-EEEEecCceEEEEcCEEEECCCcccC
Confidence 00 0 0000000011 122222 7889999999999877665 33432 24457999999999998654
Q ss_pred h
Q 022277 216 I 216 (300)
Q Consensus 216 ~ 216 (300)
.
T Consensus 117 ~ 117 (452)
T 3oc4_A 117 S 117 (452)
T ss_dssp C
T ss_pred C
Confidence 3
No 131
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.06 E-value=1.5e-09 Score=102.73 Aligned_cols=49 Identities=24% Similarity=0.322 Sum_probs=40.3
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCC
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (300)
.+.+.|.+ +++|+++++|++|+.++++ +.|++.+|+++.||.||+|+..
T Consensus 535 ~l~~aLa~---gl~I~l~t~V~~I~~~~~~-v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 535 VIIEKLAE---GLDIQLKSPVQCIDYSGDE-VQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp HHHHHHHT---TSCEESSCCEEEEECSSSS-EEEEETTCCEEEESEEEECCCH
T ss_pred HHHHHHHh---CCcEEcCCeeEEEEEcCCE-EEEEECCCcEEEcCEEEECCCH
Confidence 45555543 6699999999999988877 4588999988999999999964
No 132
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.06 E-value=7.9e-10 Score=99.51 Aligned_cols=37 Identities=32% Similarity=0.623 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4689999999999999999999999999999999765
No 133
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.04 E-value=5.1e-10 Score=100.82 Aligned_cols=118 Identities=16% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
+.||+|||||++|+++|..|+++ |.+|+|||+.+.+..... ++...+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~---------------gl~~~~~--------------- 52 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGC---------------GIPYYVS--------------- 52 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccc---------------ccchhhc---------------
Confidence 46999999999999999999998 999999999987521110 0000000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcCCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGI 212 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~ 212 (300)
+.... .....+.. .......+.+.+. .+++++++++|++++.++.. +.+.. .+|+ .+.+|.||+|+|.
T Consensus 53 g~~~~----~~~~~~~~---~~~~~~~~~~~~~-~gi~~~~~~~V~~id~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 53 GEVSN----IESLQATP---YNVVRDPEFFRIN-KDVEALVETRAHAIDRAAHT-VEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ------------------------------------CEEECSEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCCCc----hHHhcccc---chhccCHHHHhhh-cCcEEEECCEEEEEECCCCE-EEEeecCCCCEEEEECCEEEEeCCC
Confidence 00000 00000000 0000111112111 27889999999999877665 32443 3355 7899999999997
Q ss_pred Ch
Q 022277 213 RS 214 (300)
Q Consensus 213 ~s 214 (300)
..
T Consensus 124 ~p 125 (472)
T 3iwa_A 124 KA 125 (472)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 134
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.04 E-value=5.2e-11 Score=103.08 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC------CcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG------IGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G------~~V~viE~~~~ 92 (300)
.||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 99999999863
No 135
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.04 E-value=1.9e-10 Score=95.41 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=34.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
.+||+||||||+||++|+.|+++|++|+||||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 5899999999999999999999999999999998774
No 136
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.03 E-value=2.5e-10 Score=100.98 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=67.7
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~---~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
.||+|||||++|+++|..|++ .|++|+|+|+++....... + ..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~----------------~-~~----------------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA----------------L-PH----------------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS----------------S-CC-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc----------------h-hh-----------------
Confidence 589999999999999999999 8999999999985411000 0 00
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCc----EEEcCEEEEcCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT----RIYANIVIGCDG 211 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~----~~~ad~vV~A~G 211 (300)
.. .......... . .+.+.+.+. +++++.+ +|+.++.++.. |.+.+++ ++.+|.||+|+|
T Consensus 48 ------~~-~~~~~~~~~~-~---~~~~~~~~~--gv~~~~~-~v~~i~~~~~~---V~~~~g~~~~~~~~~d~lViAtG 110 (409)
T 3h8l_A 48 ------VA-IGVRDVDELK-V---DLSEALPEK--GIQFQEG-TVEKIDAKSSM---VYYTKPDGSMAEEEYDYVIVGIG 110 (409)
T ss_dssp ------CC-SSCCCCCCEE-E---EHHHHTGGG--TCEEEEC-EEEEEETTTTE---EEEECTTSCEEEEECSEEEECCC
T ss_pred ------cc-cCCcCHHHHH-H---HHHHHHhhC--CeEEEEe-eEEEEeCCCCE---EEEccCCcccceeeCCEEEECCC
Confidence 00 0000000010 1 122222222 7888877 89999876554 5565554 399999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
....
T Consensus 111 ~~~~ 114 (409)
T 3h8l_A 111 AHLA 114 (409)
T ss_dssp CEEC
T ss_pred CCcC
Confidence 8553
No 137
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.02 E-value=1.1e-10 Score=103.85 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=67.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.+|||||||++|+++|..|++.+ ++|+|||+++... +.+...+. .......+.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v----------~~g~~~~~~i~------ 59 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHL----------AMGWRKFEDIS------ 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHH----------HHTCSCGGGSE------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHH----------hcCCCCHHHhh------
Confidence 47999999999999999999875 7899999987531 11111111 00000000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
.+... .+ +. .+++++.+ +|++|+.++.. |.+++|+++.+|++|+|+|..
T Consensus 60 -------------------~~~~~---~~-~~-~gv~~i~~-~v~~Id~~~~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 60 -------------------VPLAP---LL-PK-FNIEFINE-KAESIDPDANT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -------------------EESTT---TG-GG-GTEEEECS-CEEEEETTTTE---EEETTCCEEECSEEEECCCCE
T ss_pred -------------------hcHHH---HH-HH-CCcEEEEe-EEEEEECCCCE---EEECCCCEEECCEEEEeCCCC
Confidence 00000 01 11 16777655 79999877654 789999999999999999975
No 138
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.02 E-value=3.7e-10 Score=101.90 Aligned_cols=37 Identities=32% Similarity=0.650 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 3589999999999999999999999999999997765
No 139
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.02 E-value=1.3e-09 Score=100.77 Aligned_cols=114 Identities=18% Similarity=0.277 Sum_probs=72.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
+...||+|||||++|+++|..|++. |.+|+|+|+.+.+..... .+. ..+.....
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~-------~lp--------~~~~g~~~--------- 89 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANC-------GLP--------YYIGGVIT--------- 89 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHH--------HHHTTSSC---------
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCC-------CCc--------hhhcCcCC---------
Confidence 3568999999999999999999998 899999999987531110 000 00000000
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcC
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCD 210 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~ 210 (300)
...... . ...+.+.+.. +++++++++|+++..+++.+. +.. .+|+ .+.+|.||+|+
T Consensus 90 ---------------~~~~~~-~---~~~~~~~~~~-gi~v~~~~~V~~id~~~~~v~-v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 90 ---------------ERQKLL-V---QTVERMSKRF-NLDIRVLSEVVKINKEEKTIT-IKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp ---------------CGGGGB-S---SCHHHHHHHT-TCEEECSEEEEEEETTTTEEE-EEETTTCCEEEEECSEEEECC
T ss_pred ---------------ChHHhh-c---cCHHHHHHhc-CcEEEECCEEEEEECCCCEEE-EeecCCCCEEEEeCCEEEECC
Confidence 000000 0 0112222222 789999999999988766533 443 4565 78999999999
Q ss_pred CCCh
Q 022277 211 GIRS 214 (300)
Q Consensus 211 G~~s 214 (300)
|...
T Consensus 149 G~~p 152 (588)
T 3ics_A 149 GAKP 152 (588)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9754
No 140
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.02 E-value=3.5e-09 Score=94.19 Aligned_cols=109 Identities=18% Similarity=0.278 Sum_probs=79.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+++|+.+.+..... ..++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~-----------------~~~~----------------- 193 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVT-----------------APPV----------------- 193 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS-----------------CHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchh-----------------hHHH-----------------
Confidence 357899999999999999999999999999999876521100 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEE--cCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIET--SGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+.+.+.+. |++++++++|++++. +++++..|.+.+|+.+.+|.||.|+|..+
T Consensus 194 ---------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 194 ---------------------SAFYEHLHREA--GVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp ---------------------HHHHHHHHHHH--TCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred ---------------------HHHHHHHHHhC--CeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 01223333333 899999999999987 55565568899998999999999999754
Q ss_pred --HhhhhcCC
Q 022277 215 --PIAKWIGF 222 (300)
Q Consensus 215 --~~r~~~g~ 222 (300)
.+.+.+|+
T Consensus 251 ~~~l~~~~gl 260 (431)
T 1q1r_A 251 NCELASAAGL 260 (431)
T ss_dssp CCHHHHHTTC
T ss_pred CcchhhccCC
Confidence 34444443
No 141
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.01 E-value=2.2e-10 Score=103.43 Aligned_cols=37 Identities=24% Similarity=0.489 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3589999999999999999999999999999997765
No 142
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.01 E-value=3.7e-09 Score=93.30 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=69.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.||+|||||++|+++|..|+++|. +|+|+|+.+....... + +...+...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~l~~-------------- 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-----P----------LSKAYLKS-------------- 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-----G----------GGTGGGGS--------------
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-----c----------CCHHHHCC--------------
Confidence 589999999999999999999999 8999999885421100 0 00000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
........ .. ..+.+.+ .+++++. ++|+.++.+... |.+.+|+.+.+|.||+|+|...
T Consensus 53 ----------~~~~~~~~-~~---~~~~~~~--~~i~~~~-~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 53 ----------GGDPNSLM-FR---PEKFFQD--QAIELIS-DRMVSIDREGRK---LLLASGTAIEYGHLVLATGARN 110 (404)
T ss_dssp ----------CCCTTSSB-SS---CHHHHHH--TTEEEEC-CCEEEEETTTTE---EEESSSCEEECSEEEECCCEEE
T ss_pred ----------CCCHHHcc-CC---CHHHHHh--CCCEEEE-EEEEEEECCCCE---EEECCCCEEECCEEEEeeCCCc
Confidence 00000000 01 1111222 2788888 999999876543 7788888999999999999643
No 143
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.00 E-value=1.9e-09 Score=95.24 Aligned_cols=108 Identities=20% Similarity=0.346 Sum_probs=79.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++|+.+.+..... ...
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~-----------------~~~------------------ 186 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL-----------------GRR------------------ 186 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHH-----------------CHH------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhc-----------------CHH------------------
Confidence 457999999999999999999999999999999886521000 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP- 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~- 215 (300)
-...+.+.+.+. |++++++++|++++.++ .+..|.+.+|+++.||.||.|+|..+.
T Consensus 187 --------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 187 --------------------IGAWLRGLLTEL--GVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAEPAD 243 (410)
T ss_dssp --------------------HHHHHHHHHHHH--TCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEEECC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCeecH
Confidence 011233333333 89999999999998754 445689999999999999999998653
Q ss_pred -hhhhcCC
Q 022277 216 -IAKWIGF 222 (300)
Q Consensus 216 -~r~~~g~ 222 (300)
+.+.+|+
T Consensus 244 ~l~~~~gl 251 (410)
T 3ef6_A 244 QLARQAGL 251 (410)
T ss_dssp HHHHHTTC
T ss_pred HHHHhCCC
Confidence 3444443
No 144
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.00 E-value=2.7e-09 Score=95.86 Aligned_cols=100 Identities=25% Similarity=0.267 Sum_probs=77.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+... +..++
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~~----------------- 209 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FDPLL----------------- 209 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHHH-----------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cCHHH-----------------
Confidence 3568999999999999999999999999999998765211 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCc-EEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT-RIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ad~vV~A~G~~s~ 215 (300)
...+.+.+.+. |++++++++|++++.++++ ..|.+.+|+ ++.+|.||+|+|..+.
T Consensus 210 ---------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 210 ---------------------SATLAENMHAQ--GIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEES
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 11233344333 8999999999999887666 558888998 8999999999998654
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.00 E-value=2.5e-09 Score=96.07 Aligned_cols=100 Identities=19% Similarity=0.319 Sum_probs=75.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~------------------ 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG------------------DPET------------------ 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CHHH------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccccc------------------CHHH------------------
Confidence 4799999999999999999999999999999988653210 0000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc-C--Cc--EEEcCEEEEcCCC
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-N--GT--RIYANIVIGCDGI 212 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-~--g~--~~~ad~vV~A~G~ 212 (300)
...+.+.|.+. |++++++++|++++.++++ +.|.+. + |+ ++.+|.||+|+|.
T Consensus 213 --------------------~~~l~~~l~~~--gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 213 --------------------AALLRRALEKE--GIRVRTKTKAVGYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp --------------------HHHHHHHHHHT--TCEEECSEEEEEEEEETTE-EEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred --------------------HHHHHHHHHhc--CCEEEcCCEEEEEEEeCCE-EEEEEeecCCCceeEEEcCEEEECCCc
Confidence 11233333333 8999999999999887665 446765 6 76 7999999999998
Q ss_pred ChHh
Q 022277 213 RSPI 216 (300)
Q Consensus 213 ~s~~ 216 (300)
.+..
T Consensus 270 ~p~~ 273 (464)
T 2eq6_A 270 KPRT 273 (464)
T ss_dssp EESC
T ss_pred ccCC
Confidence 7643
No 146
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.99 E-value=3.3e-09 Score=96.22 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=77.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.+.- ..++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~~~------------------ 219 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKF------------------DESV------------------ 219 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTTS------------------CHHH------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCccc------------------chhh------------------
Confidence 5789999999999999999999999999999988653110 0000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcE-EEcCEEEEcCCCChHh
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTR-IYANIVIGCDGIRSPI 216 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~-~~ad~vV~A~G~~s~~ 216 (300)
...+.+.|.+. |++++++++|++++.++++.+.|.+.+|+. +.+|.||.|+|.....
T Consensus 220 --------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 220 --------------------INVLENDMKKN--NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp --------------------HHHHHHHHHHT--TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred --------------------HHHHHHHHHhC--CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 11333444443 899999999999987655435588888887 9999999999987644
No 147
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.99 E-value=1.2e-08 Score=92.50 Aligned_cols=62 Identities=24% Similarity=0.333 Sum_probs=47.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCce-------ee--------EchhHHHHHHHcCCcHH
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTS-------LT--------LFKNGWSVLDALGVGSD 118 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~-------~~--------~~~~~~~~l~~~g~~~~ 118 (300)
..+||+|||||++||++|+.|+++|++|+|+|+++.++..... +. ..+...++++++|+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 4589999999999999999999999999999999987431111 11 12456788888887643
No 148
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.99 E-value=5.7e-10 Score=100.31 Aligned_cols=142 Identities=15% Similarity=0.213 Sum_probs=74.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEc-hhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLF-KNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.+||+|||||++|+++|..|++.|++|+|+|+. .. +|...... ..+...+...++++.+.... ...++. . .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~--gG~~~~~g~~psk~ll~~~~~~~~~~~~~-~~~g~~--~--~ 74 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YW--GGVCLNVGCIPSKALLRNAELVHIFTKDA-KAFGIS--G--E 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CT--THHHHHHSHHHHHHHHHHHHHHHHHHHHT-TTTTEE--E--C
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CC--CCcccccCchhhHHHHHHHHHHHHHHHHH-HhcCCC--C--C
Confidence 479999999999999999999999999999998 33 22211100 01122222222222222110 001111 0 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCC--cEEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~ 212 (300)
. .+++.... ...... ...+.+.+.+.+ .+++++.++.+. .+++. +.|.+.+| +++.+|.||+|+|.
T Consensus 75 ~---~~~~~~~~-~~~~~~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~-v~V~~~~G~~~~~~~d~lViAtG~ 144 (464)
T 2a8x_A 75 V---TFDYGIAY-DRSRKV--AEGRVAGVHFLMKKNKITEIHGYGTF---ADANT-LLVDLNDGGTESVTFDNAIIATGS 144 (464)
T ss_dssp C---EECHHHHH-HHHHHH--HHHHHHHHHHHHHHTTCEEECEEEEE---SSSSE-EEEEETTSCCEEEEEEEEEECCCE
T ss_pred C---ccCHHHHH-HHHHHH--HHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCe-EEEEeCCCceEEEEcCEEEECCCC
Confidence 0 00000000 000000 011222222222 388998877543 33344 55777777 68999999999998
Q ss_pred ChHhh
Q 022277 213 RSPIA 217 (300)
Q Consensus 213 ~s~~r 217 (300)
.+...
T Consensus 145 ~~~~~ 149 (464)
T 2a8x_A 145 STRLV 149 (464)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 77543
No 149
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.98 E-value=7.5e-10 Score=99.91 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=71.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.......+ ... ......
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-------~~~---------~~~~~~----------- 88 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-------LPY---------VISGAI----------- 88 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-------HHH---------HHTTSS-----------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-------cch---------hhcCCc-----------
Confidence 46999999999999999999997 8999999998765211110 000 000000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcCCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGI 212 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~ 212 (300)
........ ...+.+.+. .+++++++++|+.++.+++. +.+.. .+|+ ++.+|.||+|+|.
T Consensus 89 ------------~~~~~l~~----~~~~~~~~~-~gv~~~~~~~v~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 89 ------------ASTEKLIA----RNVKTFRDK-YGIDAKVRHEVTKVDTEKKI-VYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp ------------SCGGGGBS----SCHHHHHHT-TCCEEESSEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------------CCHHHhhh----cCHHHHHhh-cCCEEEeCCEEEEEECCCCE-EEEEEcCCCceEEEEcCEEEECCCC
Confidence 00000000 011222222 27899999999999876665 33444 4465 7999999999997
Q ss_pred ChHh
Q 022277 213 RSPI 216 (300)
Q Consensus 213 ~s~~ 216 (300)
....
T Consensus 151 ~p~~ 154 (480)
T 3cgb_A 151 RPVM 154 (480)
T ss_dssp EECC
T ss_pred cccC
Confidence 6543
No 150
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.98 E-value=1.3e-09 Score=97.01 Aligned_cols=106 Identities=17% Similarity=0.217 Sum_probs=68.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQR--LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~--~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..||+|||||++|+++|+.|++ .|++|+|||+++.... .+....... +. .....+...
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~~--g~--------~~~~~~~~~--- 61 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF-------TPAFPHLAM--GW--------RKFEDISVP--- 61 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC-------GGGHHHHHH--TC--------SCGGGSEEE---
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc-------CCCcchhcc--Cc--------cCHHHHHHH---
Confidence 3699999999999999999999 7899999999986521 111000000 00 000000000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+.+.+.+ .+++++. .+|+.++.+... |.+++++++.+|.||+|+|...
T Consensus 62 -------------------------~~~~~~~--~gv~~~~-~~v~~id~~~~~---v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 62 -------------------------LAPLLPK--FNIEFIN-EKAESIDPDANT---VTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp -------------------------STTTGGG--GTEEEEC-SCEEEEETTTTE---EEETTCCEEECSEEEECCCCEE
T ss_pred -------------------------HHHHHHh--cCCEEEE-EEEEEEECCCCE---EEECCCcEEECCEEEEcCCccc
Confidence 0001111 1778876 489988766543 7788888899999999999864
No 151
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.98 E-value=2.1e-09 Score=99.05 Aligned_cols=111 Identities=14% Similarity=0.247 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.||+|||||++|+++|+.|+++ |.+|+|+|+.+.+..... .+. ..+ ....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-------~l~--------~~~-~~~~------------ 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-------GLP--------YHI-SGEI------------ 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHH--------HHH-TSSS------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-------Cch--------HHh-cCCc------------
Confidence 5899999999999999999998 889999999987531110 000 000 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~~ 213 (300)
........-.. +.+.+.. +++++++++|++++.++.. +.+.. .+|+ ++.+|.||+|+|..
T Consensus 54 -----------~~~~~~~~~~~----~~~~~~~-~i~~~~~~~V~~id~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 54 -----------AQRSALVLQTP----ESFKARF-NVEVRVKHEVVAIDRAAKL-VTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -----------CCGGGGBCCCH----HHHHHHH-CCEEETTEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----------CChHHhhccCH----HHHHHhc-CcEEEECCEEEEEECCCCE-EEEEecCCCCeEEEECCEEEECCCCC
Confidence 00000000011 1122211 7899999999999877665 32443 2343 78999999999975
Q ss_pred h
Q 022277 214 S 214 (300)
Q Consensus 214 s 214 (300)
.
T Consensus 117 p 117 (565)
T 3ntd_A 117 P 117 (565)
T ss_dssp E
T ss_pred C
Confidence 4
No 152
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.98 E-value=8.5e-10 Score=99.82 Aligned_cols=113 Identities=18% Similarity=0.144 Sum_probs=70.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC---CcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG---IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G---~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
+.+||+|||||++|+++|..|++.| .+|+|+|+.+.....+.+ ... .++ .....
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~~--~~~------~~~~~-------- 90 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MAL--WIG------EQIAG-------- 90 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HHH--HHT------TSSSC--------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cch--hhc------CccCC--------
Confidence 4589999999999999999999998 999999998755321110 000 000 00000
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc-CCcEEEcCEEEEcCCC
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-NGTRIYANIVIGCDGI 212 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g~~~~ad~vV~A~G~ 212 (300)
........ .+.+.+ .+++++++++|+.+..+++. +.+... ++.++.+|.||+|+|.
T Consensus 91 ----------------~~~~~~~~----~~~~~~--~gv~v~~~~~v~~i~~~~~~-v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 91 ----------------PEGLFYSD----KEELES--LGAKVYMESPVQSIDYDAKT-VTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp ----------------SGGGBSCC----HHHHHH--TTCEEETTCCEEEEETTTTE-EEEEETTEEEEEECSEEEECCCE
T ss_pred ----------------HHHhhhcC----HHHHHh--CCCEEEeCCEEEEEECCCCE-EEEEeCCcEEEEECCEEEECCCC
Confidence 00000000 112222 27899999999999876655 324311 1347999999999997
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
...
T Consensus 148 ~p~ 150 (490)
T 2bc0_A 148 QPI 150 (490)
T ss_dssp EEC
T ss_pred CcC
Confidence 554
No 153
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.97 E-value=3.3e-09 Score=92.34 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=67.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..||+|||||++|+++|..|++.| +|+|+|+.+...... +.....+. +.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~------~~l~~~~~--g~---------------------- 56 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSK------PMLSHYIA--GF---------------------- 56 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCS------TTHHHHHT--TS----------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcccc------chhHHHHh--CC----------------------
Confidence 479999999999999999999999 999999987542100 00000000 00
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
.+ ..... ... .+.+.+. +++++++++|+.++.+... |. .+|+++.+|.||+|+|...
T Consensus 57 ----~~------~~~~~-~~~---~~~~~~~--~v~~~~g~~v~~id~~~~~---V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 ----IP------RNRLF-PYS---LDWYRKR--GIEIRLAEEAKLIDRGRKV---VI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp ----SC------GGGGC-SSC---HHHHHHH--TEEEECSCCEEEEETTTTE---EE-ESSCEEECSEEEECCCEEE
T ss_pred ----CC------HHHhc-cCC---HHHHHhC--CcEEEECCEEEEEECCCCE---EE-ECCcEEECCEEEECCCCCC
Confidence 00 00000 000 1122222 7899999999998765432 55 6677899999999999644
No 154
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.97 E-value=1.7e-09 Score=97.28 Aligned_cols=36 Identities=33% Similarity=0.487 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+||+|||||++|+++|..|++.|++|+|+||.+.+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 589999999999999999999999999999988765
No 155
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.97 E-value=3.6e-09 Score=95.71 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=77.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc---CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~---G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
...+++|||||+.|+.+|..|++. |.+|+++|+.+.+.+.- ..++
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~------------------d~~~-------------- 233 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGF------------------DSEL-------------- 233 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTS------------------CHHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccccc------------------CHHH--------------
Confidence 357999999999999999999999 99999999998652110 0000
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
...+.+.|.+. |++++++++|++++.++++.+.|.+.+|+++.+|.||+|+|..
T Consensus 234 ------------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 234 ------------------------RKQLTEQLRAN--GINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp ------------------------HHHHHHHHHHT--TEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred ------------------------HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 11233334333 8999999999999887654456888898889999999999987
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
+.
T Consensus 288 p~ 289 (490)
T 1fec_A 288 PR 289 (490)
T ss_dssp ES
T ss_pred cC
Confidence 64
No 156
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.97 E-value=4.8e-09 Score=94.61 Aligned_cols=101 Identities=16% Similarity=0.210 Sum_probs=76.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+++|+.+.+.+.- ..++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~~~----------------- 228 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKF------------------DECI----------------- 228 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS------------------CHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccccc------------------CHHH-----------------
Confidence 45789999999999999999999999999999988652110 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCc-eEEEEEcCC-cEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNG-VTILELVNG-TRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~-~~~v~~~~g-~~~~ad~vV~A~G~~s 214 (300)
...+.+.|.+. |++++++++|++++.++++ +..|.+.+| +.+.+|.||+|+|..+
T Consensus 229 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 229 ---------------------QNTITDHYVKE--GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp ---------------------HHHHHHHHHHH--TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred ---------------------HHHHHHHHHhC--CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 11333444444 8999999999999876554 355888888 7899999999999765
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 286 ~ 286 (479)
T 2hqm_A 286 H 286 (479)
T ss_dssp C
T ss_pred c
Confidence 4
No 157
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.97 E-value=5.3e-09 Score=94.70 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=77.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc---CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~---G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
...+++|||||..|+.+|..|++. |.+|+|+|+.+.+.+.- ..++
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~------------------d~~~-------------- 237 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGF------------------DETI-------------- 237 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTS------------------CHHH--------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccccc------------------CHHH--------------
Confidence 357899999999999999999999 99999999988652110 0000
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
...+.+.|.+. |++++++++|++++.++++.+.|.+.+|+++++|.||+|+|..
T Consensus 238 ------------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 238 ------------------------REEVTKQLTAN--GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp ------------------------HHHHHHHHHHT--TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred ------------------------HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCc
Confidence 11333444333 8999999999999877654456888899889999999999986
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
..
T Consensus 292 p~ 293 (495)
T 2wpf_A 292 PR 293 (495)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 158
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.95 E-value=9.9e-10 Score=99.43 Aligned_cols=111 Identities=20% Similarity=0.261 Sum_probs=74.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
..+||+|||||++|+++|+.|++. ++|+|+|+.+.++ |.... .... .
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G--G~~~~--------------------~~~~-----~----- 153 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG--GDMWL--------------------KGIK-----Q----- 153 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS--CSGGG--------------------TCSE-----E-----
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC--Ceeec--------------------cccc-----c-----
Confidence 357999999999999999999999 9999999998762 21000 0000 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC-CCCeEEeCCeEEEEEEcCCceEEEEEcCCc--EEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL-PPESVQFSSELAKIETSGNGVTILELVNGT--RIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~--~~~ad~vV~A~G~~ 213 (300)
+ +... ...++...+.+.+ .+++++++++|.++..++..+.....++++ .+.+|.||+|+|..
T Consensus 154 -----~-------g~~~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 154 -----E-------GFNK---DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp -----T-------TTTE---EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred -----C-------CCCC---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 0 0000 2334555555443 478889999999998776653322334453 68999999999975
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
..
T Consensus 219 ~~ 220 (493)
T 1y56_A 219 DS 220 (493)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 159
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.95 E-value=8.6e-09 Score=92.27 Aligned_cols=101 Identities=20% Similarity=0.295 Sum_probs=74.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++|+.+.+.+... ..+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~-----------------~~~------------------ 192 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYF-----------------DKE------------------ 192 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTS-----------------CHH------------------
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhh-----------------hhh------------------
Confidence 457899999999999999999999999999999886532100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.|.+. |++++++++|++++.+++++..+.+ +|+++.+|.||+|+|....
T Consensus 193 --------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 193 --------------------FTDILAKDYEAH--GVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 011233334333 8999999999999875555444554 6778999999999997653
No 160
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.94 E-value=2.5e-09 Score=96.77 Aligned_cols=37 Identities=24% Similarity=0.531 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
+.+||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5699999999999999999999999999999998765
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=1.3e-09 Score=97.68 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999997
No 162
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=5e-09 Score=93.91 Aligned_cols=100 Identities=18% Similarity=0.273 Sum_probs=74.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~----------------- 213 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGF------------------EKQM----------------- 213 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS------------------CHHH-----------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc------------------CHHH-----------------
Confidence 45799999999999999999999999999999988652110 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CCcEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGTRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~ad~vV~A~G~~ 213 (300)
...+.+.|.+. |++++++++|++++.++++ +.+.+. +++++.+|.||.|+|..
T Consensus 214 ---------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 214 ---------------------AAIIKKRLKKK--GVEVVTNALAKGAEEREDG-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEESEEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEeCCe-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 11233333333 8999999999999877665 335554 44679999999999986
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
+.
T Consensus 270 p~ 271 (455)
T 1ebd_A 270 PN 271 (455)
T ss_dssp ES
T ss_pred cc
Confidence 54
No 163
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.93 E-value=1e-08 Score=90.61 Aligned_cols=104 Identities=23% Similarity=0.367 Sum_probs=76.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++|+.+.+.+... ..++
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~-----------------~~~~----------------- 189 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAA-----------------PATL----------------- 189 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTS-----------------CHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccccc-----------------CHHH-----------------
Confidence 357999999999999999999999999999999886522100 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH-
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP- 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~- 215 (300)
...+.+.+.+. |++++++++|++++ + + .|.+.+|+++.+|.||.|+|....
T Consensus 190 ---------------------~~~l~~~l~~~--GV~i~~~~~v~~i~-~-~---~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 190 ---------------------ADFVARYHAAQ--GVDLRFERSVTGSV-D-G---VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEESCCEEEEE-T-T---EEEETTSCEEECSEEEECSCEEECC
T ss_pred ---------------------HHHHHHHHHHc--CcEEEeCCEEEEEE-C-C---EEEECCCCEEEcCEEEECcCCCccH
Confidence 11233333333 89999999999998 3 3 377889989999999999997643
Q ss_pred -hhhhcCC
Q 022277 216 -IAKWIGF 222 (300)
Q Consensus 216 -~r~~~g~ 222 (300)
+.+.+|+
T Consensus 242 ~l~~~~gl 249 (408)
T 2gqw_A 242 ALARAAGL 249 (408)
T ss_dssp HHHHHHTC
T ss_pred HHHHhCCC
Confidence 4344443
No 164
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.93 E-value=1.8e-08 Score=90.25 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=75.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+++++.+.+.+... ..+
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~-----------------d~~------------------ 190 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYF-----------------DKE------------------ 190 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTC-----------------CHH------------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccC-----------------CHH------------------
Confidence 457899999999999999999999999999999886532100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.|.+. |++++++++|++++..++++ .|.+++| ++.+|.||+|+|....
T Consensus 191 --------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 191 --------------------MVAEVQKSLEKQ--AVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp --------------------HHHHHHHHHHTT--TEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCCBCC
T ss_pred --------------------HHHHHHHHHHHc--CCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCCCCC
Confidence 011233333333 89999999999998777765 5888777 8999999999998653
No 165
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.92 E-value=2.8e-09 Score=96.04 Aligned_cols=37 Identities=27% Similarity=0.614 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 4689999999999999999999999999999998765
No 166
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.92 E-value=3.3e-09 Score=95.41 Aligned_cols=36 Identities=25% Similarity=0.579 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
++||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998765
No 167
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.92 E-value=1.9e-09 Score=96.50 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHc-CCcHHHHhccccccceEEEcCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDAL-GVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
+||+|||||++|+++|..|++. |.+|+|+|+.+.....+. ... ..+ +....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~--~~~~g~~~~----------------- 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GIA--LYLGKEIKN----------------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GHH--HHHTTCBGG-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cch--hhhcCCccc-----------------
Confidence 4899999999999999999998 999999999886422111 000 000 00000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cC--CcEEEcCEEEEcCCC
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VN--GTRIYANIVIGCDGI 212 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~--g~~~~ad~vV~A~G~ 212 (300)
.. ....... +.+.+.+ .+++++++++|+.++.+++. +.+.. .+ +..+.+|.||+|+|.
T Consensus 55 ------~~------~~~~~~~----~~~~~~~--~gv~~~~~~~v~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 55 ------ND------PRGLFYS----SPEELSN--LGANVQMRHQVTNVDPETKT-IKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp ------GC------GGGGBSC----CHHHHHH--TTCEEEESEEEEEEEGGGTE-EEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------CC------HHHhhhc----CHHHHHH--cCCEEEeCCEEEEEEcCCCE-EEEEecCCCceEEEECCEEEEccCC
Confidence 00 0000000 1112222 28899999999999876655 32433 12 357999999999997
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
...
T Consensus 116 ~p~ 118 (452)
T 2cdu_A 116 KPT 118 (452)
T ss_dssp EEC
T ss_pred CcC
Confidence 554
No 168
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.92 E-value=5.9e-09 Score=93.22 Aligned_cols=100 Identities=17% Similarity=0.251 Sum_probs=72.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||++|+.+|..|++.|.+|+|+|+.+.+..... ..+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~-----------------~~~------------------ 192 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYL-----------------DKE------------------ 192 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTC-----------------CHH------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccC-----------------CHH------------------
Confidence 468999999999999999999999999999999886521100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.+.+ .|++++++++|++++.+ ++++.+.+ +++++.+|.||+|+|..+.
T Consensus 193 --------------------~~~~l~~~l~~--~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 193 --------------------FTDVLTEEMEA--NNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp --------------------HHHHHHHHHHT--TTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred --------------------HHHHHHHHHHh--CCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 01123333333 38999999999999865 44434555 4568999999999997653
No 169
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.91 E-value=9.3e-09 Score=90.53 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=68.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
.+|+|||||++|+++|..|++.| .+|+|||+++..... +.. ..+........
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~~----------~~v~~g~~~~~--------- 56 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------YMS----------NEVIGGDRELA--------- 56 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------TTH----------HHHHHTSSCGG---------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------cCH----------HHHhcCCCCHH---------
Confidence 58999999999999999999876 589999998753111 110 11111000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
. .......+ .+ .|+++.. .+|++|+.+... |.+.+|.++.+|.+|+|+|....
T Consensus 57 ---------------~-~~~~~~~~----~~--~gv~~i~-~~v~~id~~~~~---v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 57 ---------------S-LRVGYDGL----RA--HGIQVVH-DSALGIDPDKKL---VKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp ---------------G-GEECSHHH----HH--TTCEEEC-SCEEEEETTTTE---EEETTSCEEECSEEEECCCEEEC
T ss_pred ---------------H-HhhCHHHH----HH--CCCEEEE-eEEEEEEccCcE---EEecccceeecceeeeccCCccc
Confidence 0 00111122 22 2778765 478888876654 78899999999999999997543
No 170
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.90 E-value=1.1e-08 Score=92.82 Aligned_cols=101 Identities=17% Similarity=0.293 Sum_probs=77.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||+.|+.+|..|++.|.+|+++|+.+.+.+.- . .+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----d-------------~~------------------ 224 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYE-----D-------------AD------------------ 224 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCS-----S-------------HH------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc-----C-------------HH------------------
Confidence 35789999999999999999999999999999988653210 0 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChHh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~~ 216 (300)
-...+.+.+.+. |++++++++|++++.++++ +.|.+.+|+++.+|.||+|+|..+..
T Consensus 225 --------------------~~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 225 --------------------AALVLEESFAER--GVRLFKNARAASVTRTGAG-VLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEETTCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCEEECC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCE-EEEEECCCcEEEcCEEEECCCCCcCC
Confidence 011233333333 8999999999999887666 44778888889999999999987643
No 171
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.90 E-value=1.3e-08 Score=92.75 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
..+.+++|||||++|+++|..+++.|.+|+|+++...+. . ..+++
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~-~------------------~D~ei---------------- 265 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR-G------------------FDQQC---------------- 265 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST-T------------------SCHHH----------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc-c------------------cchhH----------------
Confidence 356899999999999999999999999999999754321 0 00111
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
...+.+.|.+. |+++++++.++.++..++.+. |.+.++..+.+|.|++|+|+...
T Consensus 266 ----------------------~~~l~~~l~~~--gi~~~~~~~v~~~~~~~~~~~-v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 266 ----------------------AVKVKLYMEEQ--GVMFKNGILPKKLTKMDDKIL-VEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp ----------------------HHHHHHHHHHT--TCEEEETCCEEEEEEETTEEE-EEETTSCEEEESEEEECSCEEES
T ss_pred ----------------------HHHHHHHHHhh--cceeecceEEEEEEecCCeEE-EEEcCCCeEEEEEEEEcccccCC
Confidence 11334444444 899999999999998887744 88888888999999999998654
No 172
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.90 E-value=7.4e-09 Score=93.39 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=74.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.-. .+
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~------------------~~------------------ 225 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMD------------------GE------------------ 225 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSC------------------HH------------------
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccC------------------HH------------------
Confidence 357999999999999999999999999999999986632100 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEE--cCCceEEEEEc-----CCcEEEcCEEEEc
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIET--SGNGVTILELV-----NGTRIYANIVIGC 209 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~--~~~~~~~v~~~-----~g~~~~ad~vV~A 209 (300)
-...+.+.|.+. |++++++++|++++. +++. +.|.+. +++.+.+|.||+|
T Consensus 226 --------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a 282 (478)
T 1v59_A 226 --------------------VAKATQKFLKKQ--GLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQENLEAEVLLVA 282 (478)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEEC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCceEEECCEEEEC
Confidence 011233333333 899999999999987 4443 446665 3467999999999
Q ss_pred CCCChHh
Q 022277 210 DGIRSPI 216 (300)
Q Consensus 210 ~G~~s~~ 216 (300)
+|..+..
T Consensus 283 ~G~~p~~ 289 (478)
T 1v59_A 283 VGRRPYI 289 (478)
T ss_dssp SCEEECC
T ss_pred CCCCcCC
Confidence 9986543
No 173
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.90 E-value=1.5e-08 Score=90.33 Aligned_cols=115 Identities=19% Similarity=0.290 Sum_probs=82.8
Q ss_pred cceeeecchhhHHHHHHhhhhccCCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHH
Q 022277 33 CFQTRTRSRSKAIRLSIAKAEADVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDA 112 (300)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~ 112 (300)
.+..++..+...++..... ....+++|||||+.|+.+|..|++.|.+|+|+|+.+.+.+...
T Consensus 126 ~~~~~~~~~~~~l~~~~~~----~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d-------------- 187 (437)
T 4eqs_A 126 TFTLRNLEDTDAIDQFIKA----NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMD-------------- 187 (437)
T ss_dssp EECCSSHHHHHHHHHHHHH----HTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSC--------------
T ss_pred EEeeccHHHHHHHHHhhhc----cCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccccc--------------
Confidence 3445556666555544331 1357899999999999999999999999999999886632110
Q ss_pred cCCcHHHHhccccccceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEE
Q 022277 113 LGVGSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTI 192 (300)
Q Consensus 113 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~ 192 (300)
. -....+.+.|.+. |++++++++|++++. +.
T Consensus 188 ----~--------------------------------------~~~~~~~~~l~~~--gV~i~~~~~v~~~~~--~~--- 218 (437)
T 4eqs_A 188 ----A--------------------------------------DMNQPILDELDKR--EIPYRLNEEINAING--NE--- 218 (437)
T ss_dssp ----G--------------------------------------GGGHHHHHHHHHT--TCCEEESCCEEEEET--TE---
T ss_pred ----c--------------------------------------hhHHHHHHHhhcc--ceEEEeccEEEEecC--Ce---
Confidence 0 0112344445444 899999999998753 33
Q ss_pred EEEcCCcEEEcCEEEEcCCCCh
Q 022277 193 LELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 193 v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+.+++|+++++|.||.|.|...
T Consensus 219 v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 219 ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp EEETTSCEEECSEEEECCCEEE
T ss_pred eeecCCeEEeeeeEEEEeceec
Confidence 7789999999999999999754
No 174
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.89 E-value=1.2e-08 Score=91.63 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999998
No 175
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.89 E-value=9.5e-09 Score=93.68 Aligned_cols=99 Identities=20% Similarity=0.318 Sum_probs=75.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCce
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (300)
.+++|||||..|+.+|..|++.|.+|+++|+.+.+.+.- ..++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~------------------~~~~------------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIK------------------DNET------------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCC------------------SHHH-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccc------------------cHHH-------------------
Confidence 799999999999999999999999999999988652110 0000
Q ss_pred EEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCc-e--EEEEEcCCc-EEEcCEEEEcCCCCh
Q 022277 139 LRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNG-V--TILELVNGT-RIYANIVIGCDGIRS 214 (300)
Q Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~-~--~~v~~~~g~-~~~ad~vV~A~G~~s 214 (300)
...+.+.|.+. |++++++++|++++.++++ + +.|.+++|+ ++.+|.||+|+|..+
T Consensus 258 -------------------~~~l~~~l~~~--GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 258 -------------------RAYVLDRMKEQ--GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp -------------------HHHHHHHHHHT--TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred -------------------HHHHHHHHHhC--CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 11233334333 8999999999999876554 2 457888887 899999999999876
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 317 ~ 317 (523)
T 1mo9_A 317 R 317 (523)
T ss_dssp C
T ss_pred C
Confidence 4
No 176
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.89 E-value=1.5e-08 Score=91.62 Aligned_cols=99 Identities=20% Similarity=0.336 Sum_probs=72.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+|+|+.+.+.+.. +..++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~~----------------- 238 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY-----------------YDRDL----------------- 238 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT-----------------SCHHH-----------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH-----------------HHHHH-----------------
Confidence 46789999999999999999999999999999988652210 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+.+.|.+. |++++++++|++++. ++++..|.+ +|+++.+|.||+|+|...
T Consensus 239 ---------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 239 ---------------------TDLMAKNMEEH--GIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp ---------------------HHHHHHHHHTT--TCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred ---------------------HHHHHHHHHhC--CeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 11233333333 899999999999986 344333555 667899999999999764
No 177
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.89 E-value=7.5e-09 Score=93.44 Aligned_cols=100 Identities=19% Similarity=0.296 Sum_probs=75.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~------------------~~~~----------------- 228 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGA------------------DRDL----------------- 228 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS------------------CHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccc------------------CHHH-----------------
Confidence 35799999999999999999999999999999988653210 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC----CcEEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN----GTRIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~----g~~~~ad~vV~A~G~ 212 (300)
...+.+.|.+. |++++++++|++++.++++ ..|.+.+ |+++.+|.||+|+|.
T Consensus 229 ---------------------~~~l~~~l~~~--gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 229 ---------------------VKVWQKQNEYR--FDNIMVNTKTVAVEPKEDG-VYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ---------------------HHHHHHHHGGG--EEEEECSCEEEEEEEETTE-EEEEEESSSCCSSCEEESCEEECCCE
T ss_pred ---------------------HHHHHHHHHhc--CCEEEECCEEEEEEEcCCe-EEEEEeccCCCceEEEcCEEEECcCC
Confidence 11233344333 8999999999999877655 4477776 677999999999998
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
...
T Consensus 285 ~p~ 287 (482)
T 1ojt_A 285 APN 287 (482)
T ss_dssp EEC
T ss_pred CcC
Confidence 754
No 178
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.89 E-value=8.2e-09 Score=94.00 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=33.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+..+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356899999999999999999999999999999965
No 179
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.88 E-value=2.3e-09 Score=97.07 Aligned_cols=132 Identities=18% Similarity=0.223 Sum_probs=74.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+|||||++|+++|..|++. |.+|+|||+.+....... +-+..++. +..... .....+...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-----~lsk~l~~--~~~~~~------~~~~~~~~~ 76 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-----PLSKELWF--SDDPNV------TKTLRFKQW 76 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-----GGGTGGGC--C--CTH------HHHCEEECT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-----CCCHHhhc--CCccch------hhccccccc
Confidence 568999999999999999999887 889999999876521110 00000000 000000 000111111
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhc-CCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQ-LPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
.+.. ..+.+... ..+ .....+ .+. -.+++++++++|++++.++.. |.+.+|+++.+|.||+|+|..
T Consensus 77 ~~~~-~~~~~~~~----~~~-~~~~~l----~~~~~~gv~~~~g~~v~~id~~~~~---V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 77 NGKE-RSIYFQPP----SFY-VSAQDL----PHIENGGVAVLTGKKVVQLDVRDNM---VKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TSCE-EESBSSCG----GGS-BCTTTT----TTSTTCEEEEEETCCEEEEEGGGTE---EEETTSCEEEEEEEEECCCEE
T ss_pred cccc-ccccccch----Hhh-cchhhh----hhhhcCCeEEEcCCEEEEEECCCCE---EEECCCCEEECCEEEECCCCC
Confidence 1110 00111100 000 111111 111 137889999999999876543 778888899999999999975
Q ss_pred h
Q 022277 214 S 214 (300)
Q Consensus 214 s 214 (300)
.
T Consensus 144 p 144 (493)
T 1m6i_A 144 P 144 (493)
T ss_dssp E
T ss_pred C
Confidence 4
No 180
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.88 E-value=1.2e-09 Score=97.96 Aligned_cols=35 Identities=31% Similarity=0.599 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
+||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 79999999999999999999999999999998765
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.88 E-value=6.7e-09 Score=92.83 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=69.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
+||+|||||++|+++|..|++. |.+|+|+|+.+..+..+. ....+. .+. ...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~~-~~~-------~~~----------- 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-------GMQLYL-EGK-------VKD----------- 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-------GHHHHH-TTS-------SCC-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-------cchhhh-cCc-------cCC-----------
Confidence 4899999999999999999998 999999999886531111 000000 000 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-cCCc--EEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~~ 213 (300)
...... .+.+.+.+. +++++.+++|+.+..+++. +.+.. .+|+ ++.+|.||+|+|..
T Consensus 55 -------------~~~~~~----~~~~~~~~~--gv~~~~~~~v~~i~~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 55 -------------VNSVRY----MTGEKMESR--GVNVFSNTEITAIQPKEHQ-VTVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp -------------GGGSBS----CCHHHHHHT--TCEEEETEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -------------HHHhhc----CCHHHHHHC--CCEEEECCEEEEEeCCCCE-EEEEecCCCceEEEeCCEEEEcCCCC
Confidence 000000 011222222 8899999999999876655 32443 3464 48999999999975
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
..
T Consensus 115 p~ 116 (447)
T 1nhp_A 115 PF 116 (447)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 182
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.87 E-value=1.9e-08 Score=90.33 Aligned_cols=100 Identities=16% Similarity=0.302 Sum_probs=74.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~----------------- 214 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPNE------------------DADV----------------- 214 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CHHH-----------------
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccccc------------------CHHH-----------------
Confidence 35799999999999999999999999999999998653210 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc-CC--cEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~vV~A~G~~ 213 (300)
...+.+.|.+. |++++++++|++++.++++ +.+.+. +| +++.+|.||.|+|..
T Consensus 215 ---------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 215 ---------------------SKEIEKQFKKL--GVTILTATKVESIADGGSQ-VTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp ---------------------HHHHHHHHHHH--TCEEECSCEEEEEEECSSC-EEEEEESSSCEEEEEESEEEECSCEE
T ss_pred ---------------------HHHHHHHHHHc--CCEEEeCcEEEEEEEcCCe-EEEEEEcCCceEEEEcCEEEECCCCC
Confidence 11233344333 8999999999999877655 336664 56 579999999999976
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
..
T Consensus 271 p~ 272 (464)
T 2a8x_A 271 PN 272 (464)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 183
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.87 E-value=1.5e-08 Score=91.48 Aligned_cols=100 Identities=23% Similarity=0.356 Sum_probs=77.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+++++.+.+...- ...
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~------------------~~~------------------ 233 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNF------------------DYD------------------ 233 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CHH------------------
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccccc------------------CHH------------------
Confidence 35799999999999999999999999999999988652110 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.+.+. |++++++++|++++.+++++ .|.+.+|+++.+|.||+|+|..+.
T Consensus 234 --------------------~~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 234 --------------------LRQLLNDAMVAK--GISIIYEATVSQVQSTENCY-NVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp --------------------HHHHHHHHHHHH--TCEEESSCCEEEEEECSSSE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred --------------------HHHHHHHHHHHC--CCEEEeCCEEEEEEeeCCEE-EEEECCCcEEEcCEEEEeeCCCcC
Confidence 011233444443 89999999999999877764 588999988999999999998654
No 184
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.87 E-value=1.6e-08 Score=91.03 Aligned_cols=109 Identities=28% Similarity=0.409 Sum_probs=79.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
...+++|||||..|+.+|..|++. |.+|+++|+.+.+.+... ...
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~-----------------~~~----------------- 203 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFT-----------------SKS----------------- 203 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTS-----------------CHH-----------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccccc-----------------CHH-----------------
Confidence 357999999999999999999999 999999999886532100 000
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.+.+. |++++++++|++++.+++.+. |.+.+|+++.+|.||+|+|..+.
T Consensus 204 ---------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 204 ---------------------LSQMLRHDLEKN--DVVVHTGEKVVRLEGENGKVA-RVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp ---------------------HHHHHHHHHHHT--TCEEECSCCEEEEEESSSBEE-EEEESSCEEECSEEEECSCEEEC
T ss_pred ---------------------HHHHHHHHHHhc--CCEEEeCCEEEEEEccCCeEE-EEEeCCCEEEcCEEEECCCCCcC
Confidence 011233333333 899999999999988666644 78888989999999999998643
Q ss_pred --hhhhcCCC
Q 022277 216 --IAKWIGFS 223 (300)
Q Consensus 216 --~r~~~g~~ 223 (300)
+.+.+|+.
T Consensus 260 ~~l~~~~gl~ 269 (472)
T 3iwa_A 260 TQLARDAGLE 269 (472)
T ss_dssp CHHHHHHTCC
T ss_pred HHHHHhCCcc
Confidence 44444543
No 185
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.86 E-value=1.7e-08 Score=90.85 Aligned_cols=102 Identities=19% Similarity=0.330 Sum_probs=74.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.+.. +..++
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~~----------------- 222 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG-----------------IDMEI----------------- 222 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------CCHHH-----------------
T ss_pred cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------cCHHH-----------------
Confidence 35789999999999999999999999999999988653210 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE-----cCCcEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-----VNGTRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~-----~~g~~~~ad~vV~A~G 211 (300)
...+.+.|.+. |++++++++|++++.++++.+.+.+ .+++++.+|.||+|+|
T Consensus 223 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 223 ---------------------SKNFQRILQKQ--GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcC
Confidence 11233333333 8999999999999887655233553 4556899999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
..+.
T Consensus 280 ~~p~ 283 (474)
T 1zmd_A 280 RRPF 283 (474)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8654
No 186
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.86 E-value=1.1e-08 Score=91.16 Aligned_cols=111 Identities=17% Similarity=0.194 Sum_probs=67.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
++|+|||||++|+++|..|++.| .+|+|+|+.+........ + ..+......
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~--l--------------~~~~~~~~~----------- 53 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA--L--------------PYVIGEVVE----------- 53 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGG--H--------------HHHHTTSSC-----------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcch--h--------------HHHHcCCcc-----------
Confidence 47999999999999999999988 479999998754211110 0 000000000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---CcEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GTRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g~~~~ad~vV~A~G~~ 213 (300)
............+.+. . +++++.+++|+.+..+...+. +.... +..+.+|.||+|+|..
T Consensus 54 ------------~~~~~~~~~~~~~~~~---~--~i~~~~~~~V~~id~~~~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 54 ------------DRRYALAYTPEKFYDR---K--QITVKTYHEVIAINDERQTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp ------------CGGGTBCCCHHHHHHH---H--CCEEEETEEEEEEETTTTEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred ------------chhhhhhcCHHHHHHh---c--CCEEEeCCeEEEEEccCcEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 0000011112222222 1 789999999999987665532 33322 2368899999999975
Q ss_pred h
Q 022277 214 S 214 (300)
Q Consensus 214 s 214 (300)
.
T Consensus 116 p 116 (437)
T 4eqs_A 116 A 116 (437)
T ss_dssp E
T ss_pred c
Confidence 4
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.86 E-value=1.2e-08 Score=89.42 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=67.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
..+||+|||||++|+++|..|++.| .+|+|+|++........ .......
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~--------------------~l~~~~~--------- 53 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKP--------------------MLSTGFS--------- 53 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGG--------------------GGGGTTT---------
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcc--------------------cccHHHh---------
Confidence 3589999999999999999999999 46899998762110000 0000000
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
............ .+.+.+.. +++++.+++|+.+..++.. |.+.+ ..+.+|.||+|+|...
T Consensus 54 -----------~~~~~~~~~~~~----~~~~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~-~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 54 -----------KNKDADGLAMAE----PGAMAEQL-NARILTHTRVTGIDPGHQR---IWIGE-EEVRYRDLVLAWGAEP 113 (384)
T ss_dssp -----------TTCCHHHHEEEC----HHHHHHHT-TCEEECSCCCCEEEGGGTE---EEETT-EEEECSEEEECCCEEE
T ss_pred -----------CCCCHHHhhccC----HHHHHHhC-CcEEEeCCEEEEEECCCCE---EEECC-cEEECCEEEEeCCCCc
Confidence 000000000000 11222222 7899999999999765543 55554 4799999999999755
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 114 ~ 114 (384)
T 2v3a_A 114 I 114 (384)
T ss_dssp C
T ss_pred C
Confidence 3
No 188
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.85 E-value=1.7e-08 Score=90.72 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=74.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+++|+.+.+.+.- ..+
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~~------------------ 216 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTL------------------DED------------------ 216 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CHH------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccC------------------CHH------------------
Confidence 45799999999999999999999999999999998653210 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHH-HhcCCCCeEEeCCeEEEEEEcCCceEEEEEc--CC--cEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETL-ANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l-~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G 211 (300)
-...+.+.| .+. |++++++++|++++.++++ +.+.+. +| +++.+|.||+|+|
T Consensus 217 --------------------~~~~l~~~l~~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 217 --------------------VTNALVGALAKNE--KMKFMTSTKVVGGTNNGDS-VSLEVEGKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp --------------------HHHHHHHHHHHHT--CCEEECSCEEEEEEECSSS-EEEEEECC---EEEEEESEEEECSC
T ss_pred --------------------HHHHHHHHHhhcC--CcEEEeCCEEEEEEEcCCe-EEEEEEcCCCceEEEECCEEEECCC
Confidence 011334444 333 8999999999999887665 346665 66 5799999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
..+.
T Consensus 274 ~~p~ 277 (468)
T 2qae_A 274 RRPF 277 (468)
T ss_dssp EEEC
T ss_pred cccC
Confidence 8754
No 189
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.85 E-value=1.6e-08 Score=90.82 Aligned_cols=100 Identities=19% Similarity=0.281 Sum_probs=76.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||+.|+.+|..|++.|.+|+++++.+.+.+.. ..++
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~------------------~~~~----------------- 213 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRF------------------DQDM----------------- 213 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CHHH-----------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc------------------CHHH-----------------
Confidence 45789999999999999999999999999999988652110 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEE-EcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILE-LVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~-~~~g~~~~ad~vV~A~G~~s~ 215 (300)
...+.+.|.+. |++++++++|++++.++++.+.|. +++|+ +.+|.||+|+|..+.
T Consensus 214 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 214 ---------------------RRGLHAAMEEK--GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ---------------------HHHHHHHHHHC--CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 11333334333 899999999999998766655688 88887 999999999998653
No 190
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.84 E-value=3.2e-08 Score=89.56 Aligned_cols=107 Identities=18% Similarity=0.255 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHH----cCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQR----LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~----~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 133 (300)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+.+.... +...
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-----------------l~~~--------------- 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-----------------LPEY--------------- 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-----------------SCHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-----------------CCHH---------------
Confidence 5789999999999999999987 488999999876431100 0000
Q ss_pred CCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCC
Q 022277 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (300)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (300)
....+.+.+.+. |++++++++|++++.+++. +.|.+.+|+++.||.||+|+|..
T Consensus 228 -----------------------~~~~~~~~l~~~--GV~v~~~~~V~~i~~~~~~-~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 228 -----------------------LSNWTMEKVRRE--GVKVMPNAIVQSVGVSSGK-LLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp -----------------------HHHHHHHHHHTT--TCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECCCEE
T ss_pred -----------------------HHHHHHHHHHhc--CCEEEeCCEEEEEEecCCe-EEEEECCCCEEECCEEEECCCCC
Confidence 011223333333 8999999999999876555 45888999899999999999986
Q ss_pred hH--hhhhcCC
Q 022277 214 SP--IAKWIGF 222 (300)
Q Consensus 214 s~--~r~~~g~ 222 (300)
.. +.+..|+
T Consensus 282 pn~~l~~~~gl 292 (493)
T 1m6i_A 282 PNVELAKTGGL 292 (493)
T ss_dssp ECCTTHHHHTC
T ss_pred ccHHHHHHcCC
Confidence 53 3444444
No 191
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=1.1e-08 Score=89.10 Aligned_cols=99 Identities=23% Similarity=0.335 Sum_probs=73.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCce
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 138 (300)
.+++|||||++|+.+|..|++.|.+|+++|+.+.+.+ +.+ ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~-------------~~------------------- 185 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE-------------EL------------------- 185 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH-------------HH-------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH-------------HH-------------------
Confidence 6899999999999999999999999999999886521 000 00
Q ss_pred EEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH--h
Q 022277 139 LRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP--I 216 (300)
Q Consensus 139 ~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~--~ 216 (300)
...+.+.|.+. |++++++++|++++ .++ |.+++|+ +++|.||.|+|..+. +
T Consensus 186 -------------------~~~l~~~l~~~--gV~i~~~~~v~~i~--~~~---v~~~~g~-i~~D~vi~a~G~~p~~~l 238 (367)
T 1xhc_A 186 -------------------SNMIKDMLEET--GVKFFLNSELLEAN--EEG---VLTNSGF-IEGKVKICAIGIVPNVDL 238 (367)
T ss_dssp -------------------HHHHHHHHHHT--TEEEECSCCEEEEC--SSE---EEETTEE-EECSCEEEECCEEECCHH
T ss_pred -------------------HHHHHHHHHHC--CCEEEcCCEEEEEE--eeE---EEECCCE-EEcCEEEECcCCCcCHHH
Confidence 11233334333 89999999999987 233 6788887 999999999997653 3
Q ss_pred hhhcCC
Q 022277 217 AKWIGF 222 (300)
Q Consensus 217 r~~~g~ 222 (300)
.+.+|+
T Consensus 239 l~~~gl 244 (367)
T 1xhc_A 239 ARRSGI 244 (367)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 444454
No 192
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.84 E-value=3.3e-08 Score=90.98 Aligned_cols=100 Identities=24% Similarity=0.384 Sum_probs=75.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+.+.-. .++
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~------------------~~~----------------- 194 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVD------------------REM----------------- 194 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSC------------------HHH-----------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcC------------------HHH-----------------
Confidence 356899999999999999999999999999999886522100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEc-------------------CCceEEEEEcC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETS-------------------GNGVTILELVN 197 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~-------------------~~~~~~v~~~~ 197 (300)
...+.+.|.+. |++++++++|++++.+ +++ +.+.+.+
T Consensus 195 ---------------------~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 250 (565)
T 3ntd_A 195 ---------------------AGFAHQAIRDQ--GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSN 250 (565)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETT
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcC
Confidence 11233333333 8999999999999873 344 4577888
Q ss_pred CcEEEcCEEEEcCCCChH
Q 022277 198 GTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 198 g~~~~ad~vV~A~G~~s~ 215 (300)
|+.+.+|.||.|+|....
T Consensus 251 g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 251 GELLETDLLIMAIGVRPE 268 (565)
T ss_dssp SCEEEESEEEECSCEEEC
T ss_pred CCEEEcCEEEECcCCccc
Confidence 889999999999998653
No 193
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.84 E-value=5.4e-09 Score=94.42 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4689999999999999999999999999999993
No 194
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.83 E-value=4.3e-09 Score=94.85 Aligned_cols=37 Identities=30% Similarity=0.574 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.++||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4689999999999999999999999999999998744
No 195
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.83 E-value=1.6e-08 Score=90.63 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=72.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~----------------- 214 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTY------------------DSEL----------------- 214 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS------------------CHHH-----------------
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccccc------------------CHHH-----------------
Confidence 35789999999999999999999999999999998663210 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC--cEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~s 214 (300)
...+.+.+.+. |++++++++|++++. ++ +.+..++| +++.+|.||+|+|...
T Consensus 215 ---------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~--~~-v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 215 ---------------------TAPVAESLKKL--GIALHLGHSVEGYEN--GC-LLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp ---------------------HHHHHHHHHHH--TCEEETTCEEEEEET--TE-EEEECSSSCCCEECCSCEEECCCEEE
T ss_pred ---------------------HHHHHHHHHHC--CCEEEECCEEEEEEe--CC-EEEEECCCceEEEECCEEEECcCCCc
Confidence 11233334333 899999999999986 33 33554456 5899999999999865
Q ss_pred H
Q 022277 215 P 215 (300)
Q Consensus 215 ~ 215 (300)
.
T Consensus 269 ~ 269 (458)
T 1lvl_A 269 R 269 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 196
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.82 E-value=9.7e-09 Score=93.07 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=43.2
Q ss_pred ecHHHHHHHHHhcCC--CCeEEeCCeEEEEEEcCC-------ceEEEEEcCC-----cEEEcCEEEEcCCCChHh
Q 022277 156 VERRILLETLANQLP--PESVQFSSELAKIETSGN-------GVTILELVNG-----TRIYANIVIGCDGIRSPI 216 (300)
Q Consensus 156 i~~~~l~~~l~~~~~--g~~i~~~~~v~~i~~~~~-------~~~~v~~~~g-----~~~~ad~vV~A~G~~s~~ 216 (300)
..|.++.++|...+. +..|+++++|++++..++ ..|.|++.++ +++.|+.||+|+|....+
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~i 216 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKM 216 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCC
Confidence 566666666654331 457999999999987543 2477887654 268999999999964433
No 197
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.82 E-value=1.4e-07 Score=84.91 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCC----------CCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 159 RILLETLANQLP----------PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 159 ~~l~~~l~~~~~----------g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
..+.+.|.+.+. +.+|+++++|++|+.+++++. |++.+|++++||.||+|++....
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECCCCEEEcCEEEEecCHHHh
Confidence 366777776652 468999999999999887744 89999988999999999996543
No 198
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.82 E-value=2.5e-08 Score=90.10 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 5699999999999999999999999999999984
No 199
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.81 E-value=3.1e-08 Score=84.23 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=73.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+... ..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~~------------------ 185 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------KI------------------ 185 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------HH------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------HH------------------
Confidence 4578999999999999999999999999999988754110 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC----C--cEEEcCEEEEcC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN----G--TRIYANIVIGCD 210 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~----g--~~~~ad~vV~A~ 210 (300)
....+.+.+.+. |++++++++|++++.+++++..|.+.+ | +.+.+|.||.|+
T Consensus 186 --------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~ 243 (320)
T 1trb_A 186 --------------------LIKRLMDKVENG--NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAI 243 (320)
T ss_dssp --------------------HHHHHHHHHHTS--SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECS
T ss_pred --------------------HHHHHHHhcccC--CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEe
Confidence 011223333333 899999999999988766655566654 4 479999999999
Q ss_pred CCChH
Q 022277 211 GIRSP 215 (300)
Q Consensus 211 G~~s~ 215 (300)
|....
T Consensus 244 G~~p~ 248 (320)
T 1trb_A 244 GHSPN 248 (320)
T ss_dssp CEEES
T ss_pred CCCCC
Confidence 97643
No 200
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.80 E-value=2.1e-08 Score=90.84 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~---G~~V~viE~~~ 91 (300)
.+||+|||||++|+++|+.|++. |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999987
No 201
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.80 E-value=3.4e-08 Score=88.73 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=73.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+++|+.+.+.+ .. ..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~------------------~~------------------ 217 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-ED------------------PA------------------ 217 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-SC------------------HH------------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-CC------------------HH------------------
Confidence 357899999999999999999999999999999886521 00 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
-...+.+.+.+. |++++++++|++++.+++. +.|.++ +.++.+|.||+|+|.++.
T Consensus 218 --------------------~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~-~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 218 --------------------IGEAVTAAFRAE--GIEVLEHTQASQVAHMDGE-FVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEETTCCEEEEEEETTE-EEEEET-TEEEEESEEEECSCEEES
T ss_pred --------------------HHHHHHHHHHhC--CCEEEcCCEEEEEEEeCCE-EEEEEC-CcEEEcCEEEECCCCCcC
Confidence 011233333333 8999999999999876554 456776 457999999999998765
No 202
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=2.3e-08 Score=89.98 Aligned_cols=100 Identities=25% Similarity=0.404 Sum_probs=74.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.+.- ..++
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~------------------~~~~----------------- 220 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTM------------------DAEI----------------- 220 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS------------------CHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc------------------cHHH-----------------
Confidence 35799999999999999999999999999999998653210 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CC--cEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G 211 (300)
...+.+.|.+. |++++++++|++++.++++ +.+.+. +| +++.+|.||+|+|
T Consensus 221 ---------------------~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 221 ---------------------RKQFQRSLEKQ--GMKFKLKTKVVGVDTSGDG-VKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp ---------------------HHHHHHHHHHS--SCCEECSEEEEEEECSSSS-EEEEEEESSSCCCEEEEESEEECCCC
T ss_pred ---------------------HHHHHHHHHHc--CCEEEeCCEEEEEEEcCCe-EEEEEEecCCCcceEEECCEEEECCC
Confidence 11233334333 8999999999999876655 335654 44 5799999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
..+.
T Consensus 277 ~~p~ 280 (470)
T 1dxl_A 277 RTPF 280 (470)
T ss_dssp EEEC
T ss_pred CCcC
Confidence 8654
No 203
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.79 E-value=4.2e-08 Score=89.39 Aligned_cols=38 Identities=26% Similarity=0.426 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
+..+||+|||||++|+++|+.|++.|++|+|||+.+.+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 35689999999999999999999999999999998755
No 204
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.79 E-value=2.9e-08 Score=91.82 Aligned_cols=97 Identities=19% Similarity=0.342 Sum_probs=74.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||.+|+.+|..|++.|.+|+++++.+.+.+... .+
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~------------------~~------------------ 229 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPID------------------YE------------------ 229 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSC------------------HH------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCC------------------HH------------------
Confidence 457999999999999999999999999999999886522100 00
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
....+.+.|.+. |++++++++|++++.++++ |.+.+|+++.+|.||+|+|..+
T Consensus 230 --------------------~~~~l~~~l~~~--GV~i~~~~~v~~i~~~~~~---v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 230 --------------------MAAYVHEHMKNH--DVELVFEDGVDALEENGAV---VRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp --------------------HHHHHHHHHHHT--TCEEECSCCEEEEEGGGTE---EEETTSCEEECSEEEECSCEEE
T ss_pred --------------------HHHHHHHHHHHc--CCEEEECCeEEEEecCCCE---EEECCCCEEEcCEEEEccCCCC
Confidence 011233334333 8999999999999876554 7788898999999999999864
No 205
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.78 E-value=6e-08 Score=87.37 Aligned_cols=100 Identities=19% Similarity=0.252 Sum_probs=74.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+.+.. ..+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~------------------ 222 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAV------------------DEQ------------------ 222 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS------------------CHH------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCccc------------------CHH------------------
Confidence 45789999999999999999999999999999988652210 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC---cEEEcCEEEEcCCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG---TRIYANIVIGCDGIR 213 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g---~~~~ad~vV~A~G~~ 213 (300)
....+.+.|.+. |++++++++|++++.+++++ .+.+.++ +.+.+|.||.|+|..
T Consensus 223 --------------------~~~~l~~~l~~~--Gv~v~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 223 --------------------VAKEAQKILTKQ--GLKILLGARVTGTEVKNKQV-TVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp --------------------HHHHHHHHHHHT--TEEEEETCEEEEEEECSSCE-EEEEESSSEEEEEEESEEEECSCEE
T ss_pred --------------------HHHHHHHHHHhC--CCEEEECCEEEEEEEcCCEE-EEEEEeCCCcEEEECCEEEEeeCCc
Confidence 011333334333 89999999999999877663 3666654 579999999999976
Q ss_pred hH
Q 022277 214 SP 215 (300)
Q Consensus 214 s~ 215 (300)
..
T Consensus 280 p~ 281 (476)
T 3lad_A 280 PV 281 (476)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 206
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.78 E-value=1.1e-08 Score=92.72 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+.+|||||||++|+++|..|++.+++|+|||+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 457899999999999999999999999999999874
No 207
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.78 E-value=3.4e-08 Score=89.14 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5799999999999999999999999999999963
No 208
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.78 E-value=4.4e-08 Score=88.61 Aligned_cols=100 Identities=23% Similarity=0.393 Sum_probs=74.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++|+.+.+..... .++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~d------------------~~~----------------- 241 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGMD------------------GEV----------------- 241 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSSC------------------HHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccCC------------------HHH-----------------
Confidence 457899999999999999999999999999999886532100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---C--cEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---G--TRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~vV~A~G 211 (300)
...+.+.|.+. |++++++++|++++.+++++ .+.+.+ | +++.+|.||.|+|
T Consensus 242 ---------------------~~~l~~~l~~~--gV~v~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 242 ---------------------AKQLQRMLTKQ--GIDFKLGAKVTGAVKSGDGA-KVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEECSEEEEEEEEETTEE-EEEEEETTSCCCEEEEESEEEECCC
T ss_pred ---------------------HHHHHHHHHhC--CCEEEECCeEEEEEEeCCEE-EEEEEecCCCceEEEEcCEEEEeeC
Confidence 11233334333 89999999999999877663 366653 4 5799999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
....
T Consensus 298 ~~p~ 301 (491)
T 3urh_A 298 RKPS 301 (491)
T ss_dssp CEEC
T ss_pred CccC
Confidence 8654
No 209
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.78 E-value=6e-08 Score=87.70 Aligned_cols=99 Identities=17% Similarity=0.266 Sum_probs=73.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+++|+.+.+.+.-. .++
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d------------------~~~----------------- 217 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQD------------------EEM----------------- 217 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCCC------------------HHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccCC------------------HHH-----------------
Confidence 457899999999999999999999999999999986531100 000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc--CC--cEEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G~ 212 (300)
...+.+.|.+ +++++++++|++++.+++++. +.+. +| +++.+|.||+|+|.
T Consensus 218 ---------------------~~~l~~~l~~---~V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 218 ---------------------KRYAEKTFNE---EFYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp ---------------------HHHHHHHHHT---TSEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECSCC
T ss_pred ---------------------HHHHHHHHhh---CcEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEeeCC
Confidence 1122233322 379999999999998777644 6664 67 57999999999998
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
...
T Consensus 273 ~p~ 275 (492)
T 3ic9_A 273 KAN 275 (492)
T ss_dssp EES
T ss_pred ccC
Confidence 653
No 210
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.77 E-value=1.6e-08 Score=90.78 Aligned_cols=34 Identities=26% Similarity=0.616 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999987
No 211
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.76 E-value=5e-08 Score=87.46 Aligned_cols=34 Identities=26% Similarity=0.567 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999993
No 212
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.76 E-value=1.8e-08 Score=90.54 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEec
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQ 89 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~ 89 (300)
..+||+|||||++|+++|+.|+++|++|+|+|+
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 468999999999999999999999999999999
No 213
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.76 E-value=4.8e-08 Score=88.07 Aligned_cols=98 Identities=20% Similarity=0.315 Sum_probs=72.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+...- ..++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~~----------------- 229 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIY------------------DGDM----------------- 229 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSSS------------------CHHH-----------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhcC------------------CHHH-----------------
Confidence 45799999999999999999999999999999987652100 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+.+.+.+. |++++++++|++++.+ +++..+.+++ .++.+|.||+|+|..+
T Consensus 230 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~-~~v~~v~~~~-~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 230 ---------------------AEYIYKEADKH--HIEILTNENVKAFKGN-ERVEAVETDK-GTYKADLVLVSVGVKP 282 (480)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEECSCCEEEEEES-SBEEEEEETT-EEEECSEEEECSCEEE
T ss_pred ---------------------HHHHHHHHHHc--CcEEEcCCEEEEEEcC-CcEEEEEECC-CEEEcCEEEECcCCCc
Confidence 11233333333 8999999999999865 4444566654 4799999999999865
No 214
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.7e-08 Score=89.71 Aligned_cols=35 Identities=26% Similarity=0.512 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+||+|||||++|+++|..|++.|++|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 215
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.76 E-value=7.4e-09 Score=92.60 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|+.|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4689999999999999999999999999999998866
No 216
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.75 E-value=5e-08 Score=83.47 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=74.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-----------------------------------------
Confidence 357899999999999999999999999999999876521
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC-----CcEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN-----GTRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G 211 (300)
...+.+.+.+. .|++++++++|++++.+++++..|.+.+ +..+.+|.||.|+|
T Consensus 211 ---------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 268 (338)
T 3itj_A 211 ---------------------STIMQKRAEKN-EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIG 268 (338)
T ss_dssp ---------------------CHHHHHHHHHC-TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSC
T ss_pred ---------------------CHHHHHHHHhc-CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeC
Confidence 01233333332 3889999999999998877666677765 35799999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 269 ~~p 271 (338)
T 3itj_A 269 HTP 271 (338)
T ss_dssp EEE
T ss_pred CCC
Confidence 754
No 217
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.75 E-value=2.7e-08 Score=96.81 Aligned_cols=36 Identities=33% Similarity=0.570 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999998866
No 218
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.74 E-value=7.4e-08 Score=86.82 Aligned_cols=101 Identities=19% Similarity=0.091 Sum_probs=74.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+...- ..++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~~~----------------- 230 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSF------------------DSMI----------------- 230 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS------------------CHHH-----------------
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccccc------------------CHHH-----------------
Confidence 35789999999999999999999999999999988652110 0000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCc-eEEEEEcC---C----cEEEcCEEEE
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNG-VTILELVN---G----TRIYANIVIG 208 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~-~~~v~~~~---g----~~~~ad~vV~ 208 (300)
...+.+.|.+. |++++++++|++++.++++ .+.+.+.+ | +.+.+|.||+
T Consensus 231 ---------------------~~~~~~~l~~~--gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~ 287 (478)
T 3dk9_A 231 ---------------------STNCTEELENA--GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLW 287 (478)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEE
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEE
Confidence 11333444333 8999999999999887665 34577765 2 5789999999
Q ss_pred cCCCChH
Q 022277 209 CDGIRSP 215 (300)
Q Consensus 209 A~G~~s~ 215 (300)
|+|....
T Consensus 288 a~G~~p~ 294 (478)
T 3dk9_A 288 AIGRVPN 294 (478)
T ss_dssp CSCEEES
T ss_pred eeccccC
Confidence 9997543
No 219
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.74 E-value=1.8e-08 Score=90.88 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999763
No 220
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.74 E-value=9.6e-08 Score=80.88 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=72.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------- 181 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCA---------------------------------------- 181 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSC----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCC----------------------------------------
Confidence 3579999999999999999999999999999988754100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G 211 (300)
..+.+.+.+. .|++++++++++++..+++++..|.+. +|+ .+.+|.||.|+|
T Consensus 182 ----------------------~~~~~~l~~~-~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 238 (311)
T 2q0l_A 182 ----------------------PITLEHAKNN-DKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVG 238 (311)
T ss_dssp ----------------------HHHHHHHHTC-TTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ----------------------HHHHHHHhhC-CCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEec
Confidence 0223333322 388999999999998775654456665 565 689999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 239 ~~p 241 (311)
T 2q0l_A 239 YDV 241 (311)
T ss_dssp EEE
T ss_pred Ccc
Confidence 754
No 221
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.73 E-value=8.8e-09 Score=88.17 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=35.8
Q ss_pred ccCCCCcEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcC
Q 022277 54 ADVRKEDIVIVGAGIAGLATAVSLQR--LGIGSLVIEQADSLR 94 (300)
Q Consensus 54 ~~~~~~dVvIIGgG~aGl~~A~~L~~--~G~~V~viE~~~~~~ 94 (300)
.....+||+||||||+||+||+.|++ .|++|+|||+.+.++
T Consensus 61 ~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 61 DKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp HHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred hhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 34467899999999999999999975 499999999998764
No 222
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.72 E-value=2.2e-09 Score=97.20 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+||+|||||++|+++|..|++.|++|+|+|++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999975
No 223
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.72 E-value=5.4e-08 Score=83.80 Aligned_cols=34 Identities=38% Similarity=0.570 Sum_probs=32.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+||+|||||++|+++|+.|++.|++|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6999999999999999999999999999999874
No 224
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.71 E-value=1.1e-07 Score=85.92 Aligned_cols=99 Identities=18% Similarity=0.247 Sum_probs=72.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||..|+.+|..|++.|.+|+++++.... .. +..++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l-~~------------------~d~~~----------------- 229 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL-RG------------------FDQQM----------------- 229 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS-TT------------------SCHHH-----------------
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC-cc------------------cCHHH-----------------
Confidence 3568999999999999999999999999999985321 00 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCc-----EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT-----RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~-----~~~ad~vV~A~G 211 (300)
...+.+.|.+. |++++++++|++++..+++...|.+.++. ++.+|.||+|+|
T Consensus 230 ---------------------~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 230 ---------------------AELVAASMEER--GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp ---------------------HHHHHHHHHHT--TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred ---------------------HHHHHHHHHhC--CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcc
Confidence 11233344333 89999999999998866543447776653 799999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 287 ~~p 289 (483)
T 3dgh_A 287 RKG 289 (483)
T ss_dssp EEE
T ss_pred ccc
Confidence 754
No 225
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.69 E-value=1.2e-07 Score=80.69 Aligned_cols=94 Identities=17% Similarity=0.237 Sum_probs=71.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+...
T Consensus 154 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~---------------------------------------- 193 (319)
T 3cty_A 154 KGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCE---------------------------------------- 193 (319)
T ss_dssp BTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSC----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCC----------------------------------------
Confidence 3478999999999999999999999999999987754100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G 211 (300)
..+.+.+.+. |++++++++++++..+++.+..|.+. +|+ .+.+|.||.|+|
T Consensus 194 ----------------------~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 194 ----------------------NAYVQEIKKR--NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp ----------------------HHHHHHHHHT--TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred ----------------------HHHHHHHhcC--CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 1223333332 89999999999998775544456664 564 689999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 250 ~~p 252 (319)
T 3cty_A 250 LIP 252 (319)
T ss_dssp EEE
T ss_pred Ccc
Confidence 754
No 226
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.68 E-value=1.7e-07 Score=79.30 Aligned_cols=95 Identities=18% Similarity=0.334 Sum_probs=72.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------------------------------------- 181 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA----------------------------------------- 181 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc-----------------------------------------
Confidence 357899999999999999999999999999998875410
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---Cc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G 211 (300)
+ ..+.+.|.+ ..|++++++++++++..+++++..|.+.+ |+ .+.+|.||.|+|
T Consensus 182 --------------------~-~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 182 --------------------D-QVLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp --------------------C-HHHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred --------------------c-HHHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 0 123333333 13889999999999987766554566653 53 689999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 240 ~~p 242 (310)
T 1fl2_A 240 LLP 242 (310)
T ss_dssp EEE
T ss_pred Ccc
Confidence 654
No 227
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.67 E-value=5.4e-08 Score=87.33 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46899999999999999999999999999999973
No 228
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=4.4e-08 Score=88.81 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999985
No 229
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.67 E-value=1.2e-07 Score=81.19 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... ..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--------------------~~------------------- 192 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH--------------------EA------------------- 192 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC--------------------HH-------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc--------------------HH-------------------
Confidence 578999999999999999999999999999998754210 00
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CC--cEEEcCEEEEcCCC
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDGI 212 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G~ 212 (300)
....+.+.+.+. |++++++++|++++.+ +++..|.+. +| +++.+|.||.|+|.
T Consensus 193 -------------------~~~~l~~~l~~~--gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 193 -------------------SVKELMKAHEEG--RLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp -------------------HHHHHHHHHHTT--SSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred -------------------HHHHHHhccccC--CeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 011233333333 8999999999999874 444446665 66 57999999999997
Q ss_pred ChH
Q 022277 213 RSP 215 (300)
Q Consensus 213 ~s~ 215 (300)
...
T Consensus 251 ~p~ 253 (335)
T 2zbw_A 251 ITK 253 (335)
T ss_dssp EEE
T ss_pred CCC
Confidence 653
No 230
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.66 E-value=1.9e-07 Score=79.04 Aligned_cols=95 Identities=15% Similarity=0.271 Sum_probs=73.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|.+.|.+|+++++.+.+..
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------------- 184 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA----------------------------------------- 184 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS-----------------------------------------
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC-----------------------------------------
Confidence 457899999999999999999999999999998875410
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc--CCc--EEEcCEEEEcCCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NGT--RIYANIVIGCDGI 212 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~--~g~--~~~ad~vV~A~G~ 212 (300)
. ..+.+.+.+. .|++++++++++++..+++++..|.+. +|+ ++.+|.||.|+|.
T Consensus 185 --------------------~-~~~~~~~~~~-~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 185 --------------------A-PSTVEKVKKN-EKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp --------------------C-HHHHHHHHHC-TTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred --------------------C-HHHHHHHHhc-CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 0 0122222222 289999999999998877665556665 775 7899999999997
Q ss_pred Ch
Q 022277 213 RS 214 (300)
Q Consensus 213 ~s 214 (300)
..
T Consensus 243 ~p 244 (315)
T 3r9u_A 243 NV 244 (315)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 231
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.66 E-value=8.6e-08 Score=86.64 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCcEEEEec
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQ 89 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~ 89 (300)
..+||+|||||++|+++|+.|++ .|++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999993
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=2.1e-07 Score=84.06 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=70.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||.+|+.+|..|++.|.+|+++++...... +..++
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~~~----------------- 227 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG-------------------FDQQM----------------- 227 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------SCHHH-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc-------------------CCHHH-----------------
Confidence 356899999999999999999999999999998642210 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---Cc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G 211 (300)
...+.+.|.+. |+++++++++++++..+++...|.+.+ |+ ++.+|.||.|+|
T Consensus 228 ---------------------~~~l~~~l~~~--gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 228 ---------------------SSLVTEHMESH--GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 11233334333 899999999999987554434466554 54 478999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 285 ~~p 287 (488)
T 3dgz_A 285 RVP 287 (488)
T ss_dssp EEE
T ss_pred CCc
Confidence 754
No 233
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.64 E-value=7.3e-08 Score=86.19 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.++||+|||||++|+++|..|++.|++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46899999999999999999999999999999973
No 234
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.64 E-value=2.3e-07 Score=79.29 Aligned_cols=96 Identities=18% Similarity=0.311 Sum_probs=71.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------------------------------------- 196 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------------------------------------- 196 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------------------------------
Confidence 457899999999999999999999999999999875410
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCC--ceEEEEEc---CC--cEEEcCEEEEc
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGN--GVTILELV---NG--TRIYANIVIGC 209 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~--~~~~v~~~---~g--~~~~ad~vV~A 209 (300)
...+.+.+.+. .|++++++++++++..+++ ++..|.+. +| +++.+|.||.|
T Consensus 197 ---------------------~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 197 ---------------------SKIMQQRALSN-PKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFA 254 (333)
T ss_dssp ---------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred ---------------------cHHHHHHHHhC-CCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEE
Confidence 00122222222 2889999999999987764 44445554 45 47899999999
Q ss_pred CCCChH
Q 022277 210 DGIRSP 215 (300)
Q Consensus 210 ~G~~s~ 215 (300)
+|....
T Consensus 255 ~G~~p~ 260 (333)
T 1vdc_A 255 IGHEPA 260 (333)
T ss_dssp SCEEES
T ss_pred eCCccc
Confidence 997653
No 235
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.64 E-value=2.4e-08 Score=94.05 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=35.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 35689999999999999999999999999999998865
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.64 E-value=2.3e-07 Score=79.13 Aligned_cols=94 Identities=18% Similarity=0.308 Sum_probs=70.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~---------------------------------------- 190 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN---------------------------------------- 190 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc----------------------------------------
Confidence 3478999999999999999999999999999988754100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CCc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G 211 (300)
..+.+.+.+. .|++++++++++++..+ +++..|.+. +|+ ++.+|.||.|+|
T Consensus 191 ----------------------~~~~~~l~~~-~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 191 ----------------------KVAQARAFAN-PKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp ----------------------HHHHHHHHTC-TTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ----------------------hHHHHHHHhc-CCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 1222333222 38899999999999874 444456665 564 789999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 247 ~~p 249 (325)
T 2q7v_A 247 HVP 249 (325)
T ss_dssp EEE
T ss_pred CCC
Confidence 754
No 237
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.64 E-value=7.1e-08 Score=83.54 Aligned_cols=97 Identities=24% Similarity=0.290 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+.... .+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~--------------------~~------------------ 204 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHG--------------------KT------------------ 204 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCS--------------------HH------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCH--------------------HH------------------
Confidence 4689999999999999999999999999999987542110 00
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc--CC--cEEEcCEEEEcCCCC
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDGIR 213 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G~~ 213 (300)
...+.+.+.+. |++++++++|++++.+++++..|.+. +| ..+.+|.||.|+|..
T Consensus 205 --------------------~~~l~~~~~~~--gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 205 --------------------AHEVERARANG--TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp --------------------HHSSHHHHHHT--SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred --------------------HHHHHHHhhcC--ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 00112222222 78999999999998876654456664 77 579999999999976
Q ss_pred h
Q 022277 214 S 214 (300)
Q Consensus 214 s 214 (300)
.
T Consensus 263 p 263 (360)
T 3ab1_A 263 S 263 (360)
T ss_dssp C
T ss_pred C
Confidence 5
No 238
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.63 E-value=2.4e-07 Score=83.15 Aligned_cols=98 Identities=26% Similarity=0.393 Sum_probs=73.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||+.|+.+|..|++.|.+|+++++.+.+.+..
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 211 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL--------------------------------------- 211 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC---------------------------------------
Confidence 35789999999999999999999999999999988652110
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcC-CceEEEEEc--CCc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSG-NGVTILELV--NGT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G 211 (300)
...++.+.+.+.+ .++++++++|++++.++ +++ .|.+. +|+ ++.+|.||.|+|
T Consensus 212 --------------------~d~~~~~~l~~~l-~v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 212 --------------------EDQDIVNTLLSIL-KLNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp --------------------CCHHHHHHHHHHH-CCCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCC
T ss_pred --------------------CCHHHHHHHHhcC-EEEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcC
Confidence 0012233333333 27999999999998876 553 47777 665 799999999999
Q ss_pred CChH
Q 022277 212 IRSP 215 (300)
Q Consensus 212 ~~s~ 215 (300)
....
T Consensus 270 ~~p~ 273 (466)
T 3l8k_A 270 RRPV 273 (466)
T ss_dssp EEEC
T ss_pred CCcc
Confidence 7653
No 239
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.62 E-value=2.2e-07 Score=80.58 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=69.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+..... +
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~---------------d----------------------- 207 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDA---------------D----------------------- 207 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCC---------------C-----------------------
Confidence 35899999999999999999999999999999875421000 0
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCC-CeEEeCCeEEEEEEcCCceEEEEEcCCcEEE-cCEEEEcCCCChH
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPP-ESVQFSSELAKIETSGNGVTILELVNGTRIY-ANIVIGCDGIRSP 215 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g-~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~-ad~vV~A~G~~s~ 215 (300)
. ........+..+.+.|.+ .| ++++.+++|++++.+++. +.|.+.+|+.+. +|.||.|+|....
T Consensus 208 --------~---~~~~~~~~~~~l~~~l~~--~g~v~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 208 --------P---SVRLSPYTRQRLGNVIKQ--GARIEMNVHYTVKDIDFNNGQ-YHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp --------C---TTSCCHHHHHHHHHHHHT--TCCEEEECSCCEEEEEEETTE-EEEEESSSCCEEESSCCEECCCBCGG
T ss_pred --------C---CccCCHHHHHHHHHHHhh--CCcEEEecCcEEEEEEecCCc-eEEEecCCeEeccCCceEEeeccCCc
Confidence 0 000000011233333333 25 899999999999866555 458888887665 5999999997653
No 240
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.62 E-value=3.2e-07 Score=77.81 Aligned_cols=103 Identities=22% Similarity=0.329 Sum_probs=76.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|.+.|.+|+++++.+.+..
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------------- 191 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------------------------------- 191 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------------------------------------
Confidence 457899999999999999999999999999999876521
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---Cc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G 211 (300)
...+.+.+.+. .|++++++++++++..+ +++..|.+.+ |+ .+.+|.||.|+|
T Consensus 192 ---------------------~~~~~~~~~~~-~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 192 ---------------------QPIYVETVKKK-PNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp ---------------------CHHHHHHHHTC-TTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ---------------------CHHHHHHHHhC-CCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 01222333332 28899999999999876 4445577765 75 799999999999
Q ss_pred CChH--hhhhcCCC
Q 022277 212 IRSP--IAKWIGFS 223 (300)
Q Consensus 212 ~~s~--~r~~~g~~ 223 (300)
.... +.+.+|+.
T Consensus 249 ~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 249 FDPPTDFAKSNGIE 262 (323)
T ss_dssp EECCHHHHHHTTCC
T ss_pred CCCChhHHhhcCee
Confidence 7653 33444443
No 241
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.61 E-value=9.4e-09 Score=92.00 Aligned_cols=37 Identities=27% Similarity=0.314 Sum_probs=34.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-c------CCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-L------GIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~------G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|..|++ . |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 45799999999999999999999 7 9999999998765
No 242
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.60 E-value=5.5e-08 Score=87.99 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCcEEEEec
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQ 89 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~ 89 (300)
..+||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999993
No 243
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.58 E-value=4.2e-07 Score=81.47 Aligned_cols=135 Identities=15% Similarity=0.203 Sum_probs=77.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCcCCCCce----eeEchhHHHHHHHcCCcHHHHhccccccceE
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTS----LTLFKNGWSVLDALGVGSDLRSQFLEIKGMA 130 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~~~~g~~----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 130 (300)
...+|+|||||..|+.+|..|++. |.+|++++|.+.+.+.... ....+...+.+..+. ..........
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~--~~~~~~~~~~---- 299 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSRE--HAERERLLRE---- 299 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSC--HHHHHHHHHH----
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCC--HHHHHHHHHH----
Confidence 357899999999999999999999 8999999999865332110 001111122222221 1100000000
Q ss_pred EEcCCCceEEEecCCCCCCCcceeeecH---HHHHHHHH----hcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CCc-
Q 022277 131 VKSEDGRELRSFGFKDEDASQEVRAVER---RILLETLA----NQLPPESVQFSSELAKIETSGNGVTILELV---NGT- 199 (300)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~l~~~l~----~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g~- 199 (300)
.....+..++. ..+.+.+. ..-.+++++++++|++++.++++ +.|.+. +|+
T Consensus 300 -----------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~ 361 (463)
T 3s5w_A 300 -----------------YHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG-IELALRDAGSGEL 361 (463)
T ss_dssp -----------------TGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE-EEEEEEETTTCCE
T ss_pred -----------------hhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE-EEEEEEEcCCCCe
Confidence 00000000110 01111111 11148999999999999887766 557776 665
Q ss_pred -EEEcCEEEEcCCCChH
Q 022277 200 -RIYANIVIGCDGIRSP 215 (300)
Q Consensus 200 -~~~ad~vV~A~G~~s~ 215 (300)
++.+|.||.|+|....
T Consensus 362 ~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 362 SVETYDAVILATGYERQ 378 (463)
T ss_dssp EEEEESEEEECCCEECC
T ss_pred EEEECCEEEEeeCCCCC
Confidence 4899999999997643
No 244
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.56 E-value=4.3e-08 Score=85.81 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 468999999999999999999999999999999876
No 245
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.55 E-value=1.8e-08 Score=98.79 Aligned_cols=36 Identities=31% Similarity=0.502 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~~ 93 (300)
.+||+|||||++|+++|..|++.|+ +|+|||+.+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 5799999999999999999999999 79999998765
No 246
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.53 E-value=6.4e-07 Score=80.02 Aligned_cols=105 Identities=22% Similarity=0.357 Sum_probs=73.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+.....
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~-------------------------------------- 188 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSF-------------------------------------- 188 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS--------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhc--------------------------------------
Confidence 346899999999999999999999999999999886522100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcC-CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh-
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL-PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS- 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s- 214 (300)
+ .++.+.+.+.+ ..++++++++|++++.++ ++..+ ..+++++.+|.||.|+|...
T Consensus 189 -------------~--------~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 189 -------------D--------KEVTDILEEKLKKHVNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp -------------C--------HHHHHHHHHHHTTTSEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEEEC
T ss_pred -------------C--------HHHHHHHHHHHHhCcEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCccC
Confidence 0 02222222222 127999999999997654 43323 45667899999999999864
Q ss_pred -HhhhhcCC
Q 022277 215 -PIAKWIGF 222 (300)
Q Consensus 215 -~~r~~~g~ 222 (300)
.+.+.+|+
T Consensus 246 ~~l~~~~gl 254 (449)
T 3kd9_A 246 IELAKQLGV 254 (449)
T ss_dssp CHHHHHTTC
T ss_pred HHHHHhCCc
Confidence 34444444
No 247
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.53 E-value=9e-08 Score=83.03 Aligned_cols=38 Identities=37% Similarity=0.532 Sum_probs=35.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC-CCc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA-DSL 93 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~-~~~ 93 (300)
....||+|||||++||++|+.|+++|++|+|+|++ +.+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 35689999999999999999999999999999999 765
No 248
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.52 E-value=9.9e-08 Score=89.56 Aligned_cols=37 Identities=30% Similarity=0.496 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+||+|||||++|+++|..|+++|++|+|+|+.+.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999998866
No 249
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.52 E-value=9.3e-07 Score=81.88 Aligned_cols=35 Identities=23% Similarity=0.474 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
...+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45789999999999999999999999999999984
No 250
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.52 E-value=3.9e-08 Score=88.06 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~~~ 93 (300)
..+||+|||||++|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 4579999999999999999999998 999999999865
No 251
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.51 E-value=1.1e-07 Score=83.75 Aligned_cols=38 Identities=26% Similarity=0.419 Sum_probs=35.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~~~~ 94 (300)
..+||+|||||++||++|+.|++. |++|+|+|+++.++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 468999999999999999999999 99999999998764
No 252
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.51 E-value=2.9e-08 Score=93.96 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=35.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998875
No 253
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.47 E-value=4.4e-07 Score=77.71 Aligned_cols=94 Identities=21% Similarity=0.330 Sum_probs=68.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~---------------------------------------- 193 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS---------------------------------------- 193 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc----------------------------------------
Confidence 4578999999999999999999999999999988754100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEc---CC--cEEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G 211 (300)
..+.+.+.+. .|++++++++|++++.+++ +..|.+. +| +.+.+|.||.|+|
T Consensus 194 ----------------------~~~~~~~~~~-~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2a87_A 194 ----------------------KIMLDRARNN-DKIRFLTNHTVVAVDGDTT-VTGLRVRDTNTGAETTLPVTGVFVAIG 249 (335)
T ss_dssp ----------------------TTHHHHHHHC-TTEEEECSEEEEEEECSSS-CCEEEEEEETTSCCEEECCSCEEECSC
T ss_pred ----------------------HHHHHHHhcc-CCcEEEeCceeEEEecCCc-EeEEEEEEcCCCceEEeecCEEEEccC
Confidence 0111122222 2889999999999986643 2234443 44 4789999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 250 ~~p 252 (335)
T 2a87_A 250 HEP 252 (335)
T ss_dssp EEE
T ss_pred Ccc
Confidence 754
No 254
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.47 E-value=4.3e-07 Score=82.18 Aligned_cols=96 Identities=21% Similarity=0.210 Sum_probs=66.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--------------CCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--------------GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFL 124 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--------------G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~ 124 (300)
..++|||||++|+++|..|++. ..+|+|+|+.+.+.+.-. +.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~------------------~~------ 273 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFE------------------KK------ 273 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSC------------------HH------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCC------------------HH------
Confidence 4799999999999999999753 368999999987632100 00
Q ss_pred cccceEEEcCCCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCc----E
Q 022277 125 EIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT----R 200 (300)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~----~ 200 (300)
-...+.+.|.+. |++++++++|++++.+. ....+...+|+ +
T Consensus 274 --------------------------------~~~~~~~~L~~~--GV~v~~~~~v~~v~~~~-~~~~~~~~dg~~~~~~ 318 (502)
T 4g6h_A 274 --------------------------------LSSYAQSHLENT--SIKVHLRTAVAKVEEKQ-LLAKTKHEDGKITEET 318 (502)
T ss_dssp --------------------------------HHHHHHHHHHHT--TCEEETTEEEEEECSSE-EEEEEECTTSCEEEEE
T ss_pred --------------------------------HHHHHHHHHHhc--ceeeecCceEEEEeCCc-eEEEEEecCcccceee
Confidence 011333444444 99999999999985332 12334455663 6
Q ss_pred EEcCEEEEcCCCC
Q 022277 201 IYANIVIGCDGIR 213 (300)
Q Consensus 201 ~~ad~vV~A~G~~ 213 (300)
+.+|.||.|+|..
T Consensus 319 i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 319 IPYGTLIWATGNK 331 (502)
T ss_dssp EECSEEEECCCEE
T ss_pred eccCEEEEccCCc
Confidence 9999999999964
No 255
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.47 E-value=1.1e-06 Score=80.68 Aligned_cols=35 Identities=43% Similarity=0.654 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~ 91 (300)
..+|+||||||.+||.+|..|++. |.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 569999999999999999999975 89999999987
No 256
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.46 E-value=5.3e-07 Score=76.81 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=70.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~----------------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----------------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC-----------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc-----------------------------------------
Confidence 568999999999999999999999999999988754210
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC-----CcEEEcCEEEEcCCC
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN-----GTRIYANIVIGCDGI 212 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G~ 212 (300)
....+.|.+. |++++.++++++++.+++ +..|.+.+ ++.+.+|.||.|+|.
T Consensus 193 ---------------------~~~~~~l~~~--gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 ---------------------EHSVENLHAS--KVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp ---------------------HHHHHHHHHS--SCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred ---------------------HHHHHHHhcC--CeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 0111223232 899999999999987655 34466655 347999999999997
Q ss_pred Ch
Q 022277 213 RS 214 (300)
Q Consensus 213 ~s 214 (300)
..
T Consensus 249 ~p 250 (332)
T 3lzw_A 249 VS 250 (332)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 257
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.45 E-value=5.9e-07 Score=81.84 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|||+|||||++|+.+|..+++.|.+|+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 58999999999999999999999999999998653
No 258
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.45 E-value=1.1e-06 Score=79.85 Aligned_cols=95 Identities=16% Similarity=0.315 Sum_probs=71.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||||..|+.+|..|++.|.+|+++++.+.+...
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~---------------------------------------- 393 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD---------------------------------------- 393 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSC----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcC----------------------------------------
Confidence 3568999999999999999999999999999988754100
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC---Cc--EEEcCEEEEcCC
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDG 211 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G 211 (300)
..+.+.|.+ .+|++++++++++++..+++++..|.+.+ |+ .+.+|.||+|+|
T Consensus 394 ----------------------~~l~~~l~~-~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 394 ----------------------QVLQDKVRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp ----------------------HHHHHHHTT-CTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ----------------------HHHHHHHhc-CCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 122233322 24889999999999987666655566653 53 689999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 451 ~~p 453 (521)
T 1hyu_A 451 LLP 453 (521)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 259
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.43 E-value=1.8e-06 Score=79.95 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=67.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||||..|+.+|..|++.|.+|+++++. .+.+. +..++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~------------------~d~~~------------------ 328 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG------------------FDQQM------------------ 328 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT------------------SCHHH------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc------------------CCHHH------------------
Confidence 458999999999999999999999999999987 32110 00000
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEc------C---CceE-EEEEcCCcEEE--cCE
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETS------G---NGVT-ILELVNGTRIY--ANI 205 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~------~---~~~~-~v~~~~g~~~~--ad~ 205 (300)
...+.+.|.+. |+++++++.+++++.. + +++. .+...+|+.+. +|.
T Consensus 329 --------------------~~~~~~~l~~~--gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~ 386 (598)
T 2x8g_A 329 --------------------AEKVGDYMENH--GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFET 386 (598)
T ss_dssp --------------------HHHHHHHHHHT--TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESE
T ss_pred --------------------HHHHHHHHHhC--CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCE
Confidence 11233333333 8999999988888643 2 2321 22345776555 999
Q ss_pred EEEcCCCChH
Q 022277 206 VIGCDGIRSP 215 (300)
Q Consensus 206 vV~A~G~~s~ 215 (300)
||.|+|....
T Consensus 387 vi~a~G~~p~ 396 (598)
T 2x8g_A 387 VIFAVGREPQ 396 (598)
T ss_dssp EEECSCEEEC
T ss_pred EEEEeCCccc
Confidence 9999997653
No 260
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.42 E-value=2.5e-06 Score=77.54 Aligned_cols=99 Identities=19% Similarity=0.137 Sum_probs=67.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+++|||||.+|+.+|..|++.|.+|+++++.. +... +..++
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~l~~------------------~d~~~----------------- 252 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRG------------------FDQDM----------------- 252 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT------------------SCHHH-----------------
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-cccc------------------CCHHH-----------------
Confidence 34679999999999999999999999999999853 2110 00000
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCC---ceEEEE--EcCC-c--EEEcCEEEE
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGN---GVTILE--LVNG-T--RIYANIVIG 208 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~---~~~~v~--~~~g-~--~~~ad~vV~ 208 (300)
...+.+.|.+. |+++++++++++++..++ +.+.+. ..+| + .+.+|.||.
T Consensus 253 ---------------------~~~~~~~l~~~--GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~ 309 (519)
T 3qfa_A 253 ---------------------ANKIGEHMEEH--GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVML 309 (519)
T ss_dssp ---------------------HHHHHHHHHHT--TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEE
T ss_pred ---------------------HHHHHHHHHHC--CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEE
Confidence 11233334333 899999998888875432 222233 3455 2 568999999
Q ss_pred cCCCCh
Q 022277 209 CDGIRS 214 (300)
Q Consensus 209 A~G~~s 214 (300)
|+|...
T Consensus 310 a~G~~p 315 (519)
T 3qfa_A 310 AIGRDA 315 (519)
T ss_dssp CSCEEE
T ss_pred ecCCcc
Confidence 999754
No 261
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.40 E-value=2.7e-07 Score=80.70 Aligned_cols=39 Identities=31% Similarity=0.440 Sum_probs=35.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
...+||+|||||++||++|+.|++.|.+|+|+|+++.++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 356899999999999999999999999999999988764
No 262
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.37 E-value=1.1e-06 Score=79.45 Aligned_cols=39 Identities=36% Similarity=0.513 Sum_probs=35.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
....||+|||||++||++|+.|+++|++|+|+|+++.++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 346899999999999999999999999999999998764
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.36 E-value=6e-07 Score=84.54 Aligned_cols=98 Identities=11% Similarity=0.087 Sum_probs=70.5
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcC
Q 022277 57 RKEDIVIVG--AGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (300)
Q Consensus 57 ~~~dVvIIG--gG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 134 (300)
...+|+||| ||..|+.+|..|++.|.+|+++++.+.+.....
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~------------------------------------ 565 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN------------------------------------ 565 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG------------------------------------
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc------------------------------------
Confidence 346799999 999999999999999999999999876521100
Q ss_pred CCceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE---cCCcEEEcCEEEEcCC
Q 022277 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL---VNGTRIYANIVIGCDG 211 (300)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~---~~g~~~~ad~vV~A~G 211 (300)
. ......+.+.|.+. |++++++++|++++.+ ++. +.. .+++++.+|.||+|+|
T Consensus 566 ---------------~----~~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~--~~~-v~~~~~~~~~~i~aD~VV~A~G 621 (690)
T 3k30_A 566 ---------------N----TFEVNRIQRRLIEN--GVARVTDHAVVAVGAG--GVT-VRDTYASIERELECDAVVMVTA 621 (690)
T ss_dssp ---------------G----GTCHHHHHHHHHHT--TCEEEESEEEEEEETT--EEE-EEETTTCCEEEEECSEEEEESC
T ss_pred ---------------c----chhHHHHHHHHHHC--CCEEEcCcEEEEEECC--eEE-EEEccCCeEEEEECCEEEECCC
Confidence 0 00122444555444 9999999999999743 322 332 2455799999999999
Q ss_pred CCh
Q 022277 212 IRS 214 (300)
Q Consensus 212 ~~s 214 (300)
...
T Consensus 622 ~~p 624 (690)
T 3k30_A 622 RLP 624 (690)
T ss_dssp EEE
T ss_pred CCC
Confidence 754
No 264
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.33 E-value=3.4e-06 Score=71.30 Aligned_cols=37 Identities=24% Similarity=0.554 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|+|||||..|+.+|..|++.|.+|+|+|+....
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 3468999999999999999999999999999987654
No 265
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.33 E-value=5.6e-07 Score=81.16 Aligned_cols=55 Identities=16% Similarity=0.338 Sum_probs=42.3
Q ss_pred HHHHHHHHHhcCCCCeEEeC--CeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 158 RRILLETLANQLPPESVQFS--SELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 158 ~~~l~~~l~~~~~g~~i~~~--~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
...+.+.|++.+...+|+++ ++|++|+.++++ |.+.+|+++.||.||.|......
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~---v~~~~G~~~~ad~VI~a~p~~~~ 271 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKT---ITFSNGEVVSYDYLISTVPFDNL 271 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTE---EEETTSCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCE---EEECCCCEEECCEEEECCCHHHH
Confidence 45677777777743489999 469999987765 45688888999999999976553
No 266
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.32 E-value=4.8e-07 Score=78.65 Aligned_cols=36 Identities=36% Similarity=0.557 Sum_probs=33.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
+||+|||||++|+++|+.|++.|.+|+|+|+++.++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 699999999999999999999999999999988664
No 267
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.30 E-value=2.7e-06 Score=71.20 Aligned_cols=87 Identities=15% Similarity=0.109 Sum_probs=67.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 136 (300)
...+|+|||+|..|+.+|..|++.| +|+++++.+.. +
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~---------------------~--------------------- 176 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE---------------------P--------------------- 176 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC---------------------C---------------------
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC---------------------C---------------------
Confidence 3578999999999999999999999 99999877631 0
Q ss_pred ceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
...+.+.|.+. |++++. ++|++++.++ .|.+.+|+++.+|.||.|+|...
T Consensus 177 ---------------------~~~~~~~l~~~--gv~i~~-~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 177 ---------------------DADQHALLAAR--GVRVET-TRIREIAGHA----DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp ---------------------CHHHHHHHHHT--TCEEEC-SCEEEEETTE----EEEETTSCEEEESEEEECCEEEC
T ss_pred ---------------------CHHHHHHHHHC--CcEEEc-ceeeeeecCC----eEEeCCCCEEEEEEEEEccCccc
Confidence 01223333333 888885 8899886533 48889999999999999999753
No 268
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.30 E-value=2.1e-06 Score=78.37 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|||+|..|+.+|..|++.|.+|+|++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999986
No 269
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.29 E-value=7.2e-07 Score=78.00 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
.+||+|||||++|+++|+.|++.|++|+|+|+++.++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999988764
No 270
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.27 E-value=2.7e-06 Score=82.93 Aligned_cols=90 Identities=14% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 137 (300)
..+|+|||+|..|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~------------------------------------------ 321 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA------------------------------------------ 321 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH------------------------------------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch------------------------------------------
Confidence 36899999999999999999999999999999875410
Q ss_pred eEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEc-CCceEEEEEcC-------C--cEEEcCEEE
Q 022277 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETS-GNGVTILELVN-------G--TRIYANIVI 207 (300)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~-------g--~~~~ad~vV 207 (300)
. .+.+.+. |+++++++.|++++.+ ++++..|.+.+ | +++.+|.||
T Consensus 322 ----------------------~-~~~l~~~--GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv 376 (965)
T 2gag_A 322 ----------------------A-AAQAVAD--GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLA 376 (965)
T ss_dssp ----------------------H-HHHHHHT--TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEE
T ss_pred ----------------------h-HHHHHhC--CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEE
Confidence 0 1222222 8999999999999874 45444566553 4 579999999
Q ss_pred EcCCCCh
Q 022277 208 GCDGIRS 214 (300)
Q Consensus 208 ~A~G~~s 214 (300)
+|+|...
T Consensus 377 ~a~G~~P 383 (965)
T 2gag_A 377 VAGGFNP 383 (965)
T ss_dssp EECCEEE
T ss_pred ECCCcCc
Confidence 9999754
No 271
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.25 E-value=1.3e-06 Score=77.52 Aligned_cols=55 Identities=11% Similarity=0.003 Sum_probs=42.6
Q ss_pred HHHHHHHhcC--CCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 160 ~l~~~l~~~~--~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
.+.+.|.+.+ .|++|+++++|++|..++++++.|. .+|+++.||.||.|+|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 4455554443 3789999999999998877766555 46778999999999999874
No 272
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.19 E-value=1.7e-06 Score=79.13 Aligned_cols=37 Identities=11% Similarity=0.212 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|+|||+|.+|+.+|..|++.+.+|+|++|.+..
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 3578999999999999999999999999999999863
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.18 E-value=1.1e-05 Score=72.27 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|+|||||.+|+.+|..|++.|.+|+++++.+.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3578999999999999999999999999999988754
No 274
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.15 E-value=6e-06 Score=73.60 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc-EEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~-V~viE~~~~ 92 (300)
...+|+|||||.+|+.+|..|++.|.+ |+++++.+.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 357899999999999999999999999 999998763
No 275
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.11 E-value=2e-06 Score=79.76 Aligned_cols=38 Identities=29% Similarity=0.313 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 46899999999999999999999999999999988653
No 276
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.11 E-value=2.3e-05 Score=76.95 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||||..|+.+|..+.+.|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999997 899999886
No 277
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.06 E-value=5.6e-06 Score=75.73 Aligned_cols=36 Identities=11% Similarity=0.302 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|||+|.+|+.+|..|++.|.+|+|++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 357899999999999999999999999999999986
No 278
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.06 E-value=5.5e-06 Score=78.41 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=32.5
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVG--AGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIG--gG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...+|+||| ||..|+.+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 346899999 99999999999999999999999987
No 279
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.05 E-value=1.1e-05 Score=71.98 Aligned_cols=37 Identities=16% Similarity=0.262 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc-EEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~-V~viE~~~~~ 93 (300)
...+|+|||||.+|+.+|..+.+.|.+ |+++++.+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 457899999999999999999999984 9999988753
No 280
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.05 E-value=4.3e-06 Score=78.27 Aligned_cols=38 Identities=32% Similarity=0.672 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
..+||+|||||++||++|+.|++.|++|+|+|+.+.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 45899999999999999999999999999999998764
No 281
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.05 E-value=4.1e-05 Score=64.60 Aligned_cols=36 Identities=14% Similarity=0.373 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 468999999999999999999999999999998865
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.04 E-value=4.8e-06 Score=79.60 Aligned_cols=38 Identities=32% Similarity=0.672 Sum_probs=35.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
...+|+|||||++||++|+.|+++|++|+|+|+.+.++
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 45799999999999999999999999999999998764
No 283
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.02 E-value=2.6e-05 Score=73.12 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=35.0
Q ss_pred HHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC--cEEEcCEEEEcCCCCh
Q 022277 161 LLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRS 214 (300)
Q Consensus 161 l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~s 214 (300)
+.+.|.+. |++++++++|++++ +++ +.+. .+| +++.+|.||.|+|...
T Consensus 579 ~~~~l~~~--GV~v~~~~~v~~i~--~~~-v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 579 HRTTLLSR--GVKMIPGVSYQKID--DDG-LHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHT--TCEEECSCEEEEEE--TTE-EEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHhc--CCEEEeCcEEEEEe--CCe-EEEe-cCCeEEEEeCCEEEECCCccc
Confidence 34444444 99999999999987 344 2233 566 5799999999999765
No 284
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.00 E-value=4.5e-06 Score=76.43 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|++|||||++|+.+|..|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 568999999999999999999999999999999864
No 285
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.98 E-value=4e-06 Score=76.37 Aligned_cols=36 Identities=39% Similarity=0.466 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~~~~ 92 (300)
..+|+||||||.+|+.+|..|++ .|++|+|||+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 47999999999999999999998 6899999999864
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.96 E-value=4.7e-05 Score=68.04 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHH--------------------HcCC-cEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQ--------------------RLGI-GSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~--------------------~~G~-~V~viE~~~~~ 93 (300)
..+|+|||||..|+.+|..|+ +.|. +|+|++|....
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 578999999999999999999 5788 69999998754
No 287
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.82 E-value=1.2e-05 Score=73.90 Aligned_cols=36 Identities=33% Similarity=0.398 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G-~~V~viE~~~~ 92 (300)
..+|+||||||.+||.+|..|++.| .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999997 79999999876
No 288
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.82 E-value=6.8e-05 Score=66.92 Aligned_cols=37 Identities=24% Similarity=0.360 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--------------------CC-cEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--------------------GI-GSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--------------------G~-~V~viE~~~~~ 93 (300)
...+|+|||+|.+|+.+|..|++. |. +|+|+++....
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 356899999999999999999974 65 89999998754
No 289
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.82 E-value=8.5e-06 Score=74.33 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|+||||||.+|+.+|..|++ |.+|+|||+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 46899999999999999999999 9999999998653
No 290
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.80 E-value=9.3e-06 Score=75.82 Aligned_cols=36 Identities=36% Similarity=0.517 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC--------CcEEEEecCC-Cc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLG--------IGSLVIEQAD-SL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G--------~~V~viE~~~-~~ 93 (300)
..+|+|||||++||++|+.|++.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999998 9999999998 76
No 291
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.79 E-value=0.00011 Score=61.70 Aligned_cols=100 Identities=13% Similarity=0.211 Sum_probs=67.5
Q ss_pred CCCcEEEECCCH-HHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHcCCcHHHHhccccccceEEEcCC
Q 022277 57 RKEDIVIVGAGI-AGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (300)
Q Consensus 57 ~~~dVvIIGgG~-aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 135 (300)
...+++|||||. +++.+|..+.+.|.+|+++++.+...
T Consensus 145 ~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~----------------------------------------- 183 (304)
T 4fk1_A 145 KDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS----------------------------------------- 183 (304)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC-----------------------------------------
T ss_pred cCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch-----------------------------------------
Confidence 345788888775 56889998888999999998766431
Q ss_pred CceEEEecCCCCCCCcceeeecHHHHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH
Q 022277 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (300)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~ 215 (300)
..+.+.|.+. ++.++.+ .++.+..+++.+..|.+++|+++.+|.+|++.|...+
T Consensus 184 -----------------------~~~~~~l~~~--g~~~~~~-~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 184 -----------------------QTIMDELSNK--NIPVITE-SIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp -----------------------HHHHHHHHTT--TCCEECS-CEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECS
T ss_pred -----------------------hhhhhhhhcc--ceeEeee-eEEEeecCCCeeeeeeccccceeeecceeeeeccccC
Confidence 0222333332 6777765 4777766655556689999999999988888775432
Q ss_pred --hhhhcCCC
Q 022277 216 --IAKWIGFS 223 (300)
Q Consensus 216 --~r~~~g~~ 223 (300)
..+.+|+.
T Consensus 238 ~~~~~~~g~~ 247 (304)
T 4fk1_A 238 NQFIEQLGCE 247 (304)
T ss_dssp SCHHHHTTCC
T ss_pred ChhhhhcCeE
Confidence 33444554
No 292
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.72 E-value=2.8e-05 Score=70.43 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 468999999999999999999999999999999874
No 293
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.71 E-value=0.00014 Score=63.86 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=33.4
Q ss_pred CCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 171 g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
|++++++++|++++. ++ |.+.+|+++++|.||.|+|...
T Consensus 232 gV~~~~~~~v~~i~~--~~---v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 232 GIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp TCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEEC
T ss_pred CCEEEcCCceEEECC--Ce---EEECCCCEEeeeEEEECCCCCc
Confidence 899999999999864 33 7788999999999999999754
No 294
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.68 E-value=4.9e-05 Score=65.09 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...+|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3478999999999999999999998 799999874
No 295
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.66 E-value=3.8e-05 Score=69.53 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 468999999999999999999999999999999863
No 296
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.63 E-value=2.1e-05 Score=72.05 Aligned_cols=36 Identities=39% Similarity=0.425 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~~~~~ 93 (300)
.+|+||||||.+|+.+|..|++ .|.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 69999999998643
No 297
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.63 E-value=5.1e-05 Score=69.96 Aligned_cols=37 Identities=35% Similarity=0.477 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE~~~~~ 93 (300)
..+|++|||+|++|+.+|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56999999999999999999999 79999999998643
No 298
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.61 E-value=0.00012 Score=67.47 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=43.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCCCCceeeEchhHHHHHHHc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDAL 113 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~~~g~~~~~~~~~~~~l~~~ 113 (300)
+.+||+|||+|+.|..+|..|++.|.+|+++||++..+.......+ ....+++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~ 62 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEY 62 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHh
Confidence 4799999999999999999999999999999999988543333332 2334444444
No 299
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.57 E-value=4.5e-05 Score=69.68 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~~~ 93 (300)
..+|++|||+|++|+.+|..|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999998 9999999998643
No 300
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.50 E-value=0.00025 Score=62.85 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=32.9
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEE--cC-----CcEEEcCEEEEcCCC
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILEL--VN-----GTRIYANIVIGCDGI 212 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~--~~-----g~~~~ad~vV~A~G~ 212 (300)
.+.+.|.+. |++++++++|++++. +++. +.. .+ ++++.+|.|+.|.|.
T Consensus 213 ~~~~~l~~~--gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 213 ILTKGLKEE--GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHT--TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHC--CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCC
Confidence 444555444 999999999999864 3322 222 23 457899999999884
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.48 E-value=0.00025 Score=62.71 Aligned_cols=47 Identities=9% Similarity=0.080 Sum_probs=34.1
Q ss_pred HHHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcC----CcEEEcCEEEEcCCCC
Q 022277 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN----GTRIYANIVIGCDGIR 213 (300)
Q Consensus 160 ~l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~----g~~~~ad~vV~A~G~~ 213 (300)
.+.+.|.+. |++++++++|++++. ++ +.+.+ ++++.+|.||.|.|..
T Consensus 205 ~l~~~l~~~--GV~i~~~~~v~~v~~--~~---v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 205 LVEDLFAER--NIDWIANVAVKAIEP--DK---VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHT--TCEEECSCEEEEECS--SE---EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHC--CCEEEeCCEEEEEeC--Ce---EEEEecCCCceEEeeeEEEECCCCc
Confidence 444555444 999999999999854 33 33444 5689999999998864
No 302
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.42 E-value=0.00067 Score=61.90 Aligned_cols=37 Identities=11% Similarity=0.359 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|+|||+|..|+.+|..|++.|.+|++++|.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 3578999999999999999999999999999998754
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.29 E-value=0.00032 Score=51.78 Aligned_cols=36 Identities=25% Similarity=0.260 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 456899999999999999999999999999999874
No 304
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.19 E-value=0.00046 Score=51.85 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|||+|..|..+|..|.+.|.+|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 456899999999999999999999999999998764
No 305
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.13 E-value=0.002 Score=58.22 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~~ 93 (300)
...+|+|||+|.+|..++..|++. +.+|+++-|.+..
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 456899999999999999999875 6799999998754
No 306
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.09 E-value=0.00059 Score=50.27 Aligned_cols=35 Identities=17% Similarity=0.415 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35899999999999999999999999999998763
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.05 E-value=0.00095 Score=49.94 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 35689999999999999999999999999999974
No 308
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.95 E-value=0.00095 Score=48.79 Aligned_cols=33 Identities=30% Similarity=0.396 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999865
No 309
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.86 E-value=0.01 Score=51.73 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=36.9
Q ss_pred CCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCCh
Q 022277 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (300)
Q Consensus 171 g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s 214 (300)
+++++.+++++.++.+.+... |.+.+|+++.+|.|+.|.|...
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~-v~~~~g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMT-VETSFGETFKAAVINLIPPQRA 258 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTE-EEETTSCEEECSEEEECCCEEE
T ss_pred CcEEEeCceEEEEEecccceE-EEcCCCcEEEeeEEEEecCcCC
Confidence 789999999999988766534 8899999999999999999653
No 310
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.83 E-value=0.0012 Score=46.59 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G-~~V~viE~~~ 91 (300)
..+|+|+|+|..|..++..|.+.| .+|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999875
No 311
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.59 E-value=0.0026 Score=46.62 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999865
No 312
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.57 E-value=0.0022 Score=49.46 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~-G~~V~viE~~~~ 92 (300)
..+|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 45899999999999999999999 999999998763
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.56 E-value=0.0026 Score=53.38 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35799999999999999999999999999998763
No 314
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.54 E-value=0.0021 Score=54.19 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||+|..|...|..++..|++|+++|.++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 346899999999999999999999999999998764
No 315
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.49 E-value=0.0081 Score=54.03 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=40.8
Q ss_pred CCeEEeCCeEEEEEEcCCceEEEEEcCCcEEEcCEEEEcCCCChH--hhhhcCCC
Q 022277 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP--IAKWIGFS 223 (300)
Q Consensus 171 g~~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~s~--~r~~~g~~ 223 (300)
|++++++++|++++.++ ++..|.+.+|+++.+|.||.|+|..+. +.+.+|+.
T Consensus 271 GV~v~~~~~v~~i~~~~-~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNE-KVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp TCEEEECSSEEEEECSS-SCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred CcEEEeCCeeEEEecCC-ceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 78999999999998654 345577888889999999999998653 45555654
No 316
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.48 E-value=0.027 Score=49.59 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=34.0
Q ss_pred HHHHHHhcCCCCeEEeCCeEEEEEEcCCceEEEEEcCC--cEEEcCEEEEcCCCC
Q 022277 161 LLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIR 213 (300)
Q Consensus 161 l~~~l~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~ 213 (300)
+.+.|.+. |+++++++.|++++ ++++. +...+| +++.+|.||.|.|..
T Consensus 206 l~~~l~~~--GV~~~~~~~v~~v~--~~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 206 VEDLFAER--NIDWIANVAVKAIE--PDKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHT--TCEEECSCEEEEEC--SSEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHhC--CeEEEeCceEEEEe--CCceE-EEeeCCCceEeecceEEEeccCC
Confidence 34444444 99999999999885 34422 444444 479999999999964
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.38 E-value=0.0027 Score=50.50 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=31.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998764
No 318
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.32 E-value=0.0034 Score=53.07 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 319
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.30 E-value=0.0044 Score=52.70 Aligned_cols=36 Identities=11% Similarity=0.312 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
...+|+|||||..|..+|..|+..|+ +|+++|++..
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999999999999999999998 9999999864
No 320
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.29 E-value=0.0048 Score=51.23 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 321
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.29 E-value=0.0042 Score=52.57 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|+|||+|..|...|..|++.|.+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999865
No 322
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.14 E-value=0.0047 Score=52.03 Aligned_cols=33 Identities=39% Similarity=0.436 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|.|||+|..|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999865
No 323
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.06 E-value=0.0071 Score=51.49 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
..+|.|||+|..|...|..|++.|.+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999985
No 324
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.01 E-value=0.0075 Score=52.37 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|+|||+|.+|+.+|..|...|.+|+++|+.+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~ 225 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAA 225 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 3579999999999999999999999999999998753
No 325
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.00 E-value=0.0077 Score=51.71 Aligned_cols=36 Identities=33% Similarity=0.332 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||+|..|.++|..|++.|++|+++++++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 456899999999999999999999999999998753
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.99 E-value=0.0078 Score=47.89 Aligned_cols=35 Identities=14% Similarity=0.276 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|||||-+|...+..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45799999999999999999999999999999754
No 327
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.97 E-value=0.008 Score=50.62 Aligned_cols=36 Identities=19% Similarity=0.534 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
+...+|.|||+|..|..+|+.|+..|+ +|+++|..+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 345789999999999999999999999 999999873
No 328
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.95 E-value=0.0066 Score=50.64 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|+|||+|..|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 329
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.94 E-value=0.009 Score=47.15 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|.+.|..|++.|.+|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998865
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.92 E-value=0.0072 Score=54.06 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||+|..|+.+|..|++.|++|+++|++..
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 357899999999999999999999999999998753
No 331
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.90 E-value=0.0076 Score=53.46 Aligned_cols=34 Identities=32% Similarity=0.542 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999999863
No 332
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.89 E-value=0.0086 Score=52.98 Aligned_cols=37 Identities=16% Similarity=0.410 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...++.|||.|..|+.+|..|++.|++|+++|+++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3578999999999999999999999999999998753
No 333
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.87 E-value=0.009 Score=49.47 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 689999999999999999999999999998764
No 334
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.86 E-value=0.0082 Score=50.37 Aligned_cols=33 Identities=30% Similarity=0.369 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999875
No 335
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.84 E-value=0.0081 Score=51.69 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999999874
No 336
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.82 E-value=0.0088 Score=52.65 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|.+||.+|..|++.|++|+.+|-+..
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 457899999999999999999999999999998763
No 337
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.79 E-value=0.01 Score=52.54 Aligned_cols=36 Identities=22% Similarity=0.482 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999999875
No 338
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.78 E-value=0.0097 Score=50.19 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
..+|+|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999999 999999875
No 339
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.75 E-value=0.01 Score=49.70 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|...|..|.+.|++|+++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 346899999999999999999999999999998763
No 340
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.73 E-value=0.0098 Score=53.02 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRL-GI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~-G~-~V~viE~~~~ 92 (300)
...+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999999876
No 341
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.71 E-value=0.0069 Score=49.78 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|||||-+|...+..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999765
No 342
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.71 E-value=0.01 Score=52.76 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...+|+|||.|.+|+++|..|.++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999865
No 343
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.70 E-value=0.0088 Score=52.96 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|+|||.|.+|+++|..|+++|++|+++|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987654
No 344
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.70 E-value=0.012 Score=49.42 Aligned_cols=37 Identities=24% Similarity=0.314 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+|.|||.|..|..+|..|.+.|++|+++++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 56 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSK 56 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 3468999999999999999999999999999998753
No 345
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.70 E-value=0.0099 Score=48.31 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999876
No 346
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.68 E-value=0.013 Score=49.68 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
..+|.|||||..|..+|..|+..|+ +|+++|.+..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3589999999999999999999999 9999999864
No 347
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.66 E-value=0.013 Score=49.51 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
..+|.|||+|..|..+|..|++.|+ +|+++|++..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3589999999999999999999998 9999998764
No 348
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.64 E-value=0.011 Score=50.54 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999875
No 349
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.60 E-value=0.012 Score=51.63 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999999864
No 350
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.59 E-value=0.0081 Score=50.50 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-----C-CcEEEEec
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL-----G-IGSLVIEQ 89 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~-----G-~~V~viE~ 89 (300)
+.+|.|||+|..|...|..|++. | .+|++++|
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999998
No 351
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.59 E-value=0.01 Score=49.35 Aligned_cols=35 Identities=14% Similarity=0.381 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+..|.|||+|..|...|..|+ .|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 4689999999999999999999 9999999998864
No 352
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.56 E-value=0.013 Score=49.79 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
++.+|.|||+|..|...|..|++.|++|++++|.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 56899999999999999999999999999999875
No 353
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.51 E-value=0.014 Score=52.00 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999998763
No 354
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.45 E-value=0.019 Score=45.44 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|.|||+|..|...|..|.+.|++|++++|+.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 355
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.45 E-value=0.014 Score=48.95 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|+|||+|..|...|..|+ .|.+|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999875
No 356
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.45 E-value=0.017 Score=51.74 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45899999999999999999999999999998764
No 357
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.44 E-value=0.012 Score=49.09 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|.|||.|..|...|..|++.|++|+++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 468999999999999999999999999999998753
No 358
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.40 E-value=0.02 Score=48.39 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
..+|+|||+|..|..+|..|+..|+ +|.++|.+..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3589999999999999999999998 9999998764
No 359
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.40 E-value=0.016 Score=49.90 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
.+.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 46899999999999999999999999 999999985
No 360
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.37 E-value=0.017 Score=50.48 Aligned_cols=35 Identities=26% Similarity=0.445 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|+|||+|.+|+.+|..+...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 56899999999999999999999999999998864
No 361
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.33 E-value=0.021 Score=48.22 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
...+|.|||+|..|.++|+.|+..|+ +|+++|....
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 45689999999999999999999999 9999998764
No 362
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.33 E-value=0.018 Score=47.78 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+|.|||.|..|...|..|.+.|++|+++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 36 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEK 36 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 47999999999999999999999999999998753
No 363
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.32 E-value=0.016 Score=50.96 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|+.+|..|++ |++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 34689999999999999999998 999999998864
No 364
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.32 E-value=0.0063 Score=54.19 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|+|+|+|-.|..+|..|...|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999853
No 365
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.32 E-value=0.018 Score=48.33 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
+|+|||+|..|..+|+.|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999875
No 366
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.31 E-value=0.0067 Score=44.70 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|+|||+|..|..+|..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 6789999999999999999999999999999876
No 367
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.30 E-value=0.014 Score=51.68 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|.|||+|..|+.+|..|++.|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 689999999999999999999999999998753
No 368
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.26 E-value=0.021 Score=46.18 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||+|..|..+|..|.+.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 457899999999999999999999999999998764
No 369
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.26 E-value=0.024 Score=47.56 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|...|..|.+.|++|+++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998864
No 370
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.25 E-value=0.02 Score=49.63 Aligned_cols=36 Identities=22% Similarity=0.474 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|+|+|+|.+|+.++..+...|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998864
No 371
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.24 E-value=0.021 Score=48.20 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~ 92 (300)
.+.+|+|||+|.+|..+|+.|+..|+ ++.++|.+..
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 35799999999999999999999998 8999998753
No 372
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.24 E-value=0.019 Score=48.47 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=29.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...+|.|||+|..|...|..|++.|.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3468999999999999999999999999999 654
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.23 E-value=0.025 Score=47.55 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 374
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.18 E-value=0.021 Score=48.27 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|.|||+|..|.++|+.|+..|+ +++++|.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35689999999999999999999998 899999864
No 375
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.18 E-value=0.018 Score=47.80 Aligned_cols=35 Identities=37% Similarity=0.467 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45799999999999999999999998 899999776
No 376
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.14 E-value=0.013 Score=46.59 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEE-EecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLV-IEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~v-iE~~~~ 92 (300)
..+|.|||+|..|.+.|..|.+.|++|++ ++|++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 46899999999999999999999999999 888764
No 377
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.10 E-value=0.018 Score=47.69 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+|.|||.|..|...|..|.+.|++|+++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~ 36 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAK 36 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence 37999999999999999999999999999998753
No 378
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=95.08 E-value=0.015 Score=51.28 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=35.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~~ 94 (300)
..+||+|||||++|+++|..|++.|++|+|+|+++.++
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 46899999999999999999999999999999998764
No 379
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.06 E-value=0.022 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|+|+|+|.+|..++..|...|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999876
No 380
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.06 E-value=0.023 Score=48.82 Aligned_cols=36 Identities=22% Similarity=0.465 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
-.+.+|+|+|||.+|..+|..|...|. +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 356899999999999999999999999 799999984
No 381
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.05 E-value=0.033 Score=45.92 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|+|.|+|..|..++..|.++|++|+++.|...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 35799999999999999999999999999999754
No 382
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.04 E-value=0.03 Score=47.21 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
...+|.|||+|..|.++|+.|+..|+ ++.++|....
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 34689999999999999999999988 9999998764
No 383
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.03 E-value=0.028 Score=47.20 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
.+|+|||+|..|..+|+.|+..|+ +|.++|.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~ 37 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 37 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCcc
Confidence 579999999999999999999997 9999998753
No 384
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.01 E-value=0.026 Score=47.77 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 5799999999999999999999998 799999875
No 385
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.00 E-value=0.023 Score=47.97 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|..+|..|.+.|++|+++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 346899999999999999999999999999998864
No 386
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.99 E-value=0.028 Score=48.26 Aligned_cols=34 Identities=18% Similarity=0.456 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|+|+|||.-|..+++.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998764
No 387
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.98 E-value=0.028 Score=47.25 Aligned_cols=33 Identities=24% Similarity=0.430 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~ 92 (300)
+|+|||+|..|..+|..|++. |.+|+++|++..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 689999999999999999985 789999999864
No 388
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.91 E-value=0.035 Score=47.28 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|.+.|..|.+.|++|+++++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998763
No 389
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.90 E-value=0.024 Score=46.69 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|+|.|||..|..++..|.++|++|+++.|.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 36899999999999999999999999999998764
No 390
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.90 E-value=0.023 Score=48.12 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEec
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQ 89 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~ 89 (300)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 391
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.90 E-value=0.024 Score=47.71 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|.|||.|..|..+|..|.+.|+ +|++++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4689999999999999999999999 999999963
No 392
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.88 E-value=0.03 Score=48.29 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...|+|+|+|.+|..+|..|...|.+|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999875
No 393
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.88 E-value=0.06 Score=44.22 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....++|+|+|-+|.++|..|.+.|.+|+|++|..
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 35689999999999999999999999999998875
No 394
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.87 E-value=0.025 Score=47.66 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G-~~V~viE~~~ 91 (300)
..+|.|||.|..|..+|..|++.| ++|+++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999986
No 395
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.86 E-value=0.035 Score=46.75 Aligned_cols=35 Identities=29% Similarity=0.394 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~ 92 (300)
..+|.|||.|..|.+.|..|.+.|+ +|+++|+++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 4689999999999999999999999 9999998763
No 396
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.85 E-value=0.03 Score=47.41 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLA-TAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~-~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||.|.+|++ +|..|.++|++|++.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 457999999999996 88999999999999998764
No 397
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.84 E-value=0.025 Score=47.27 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998763
No 398
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.80 E-value=0.02 Score=49.95 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+|.|||+|..|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 68999999999999999999 99999999875
No 399
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.78 E-value=0.031 Score=47.95 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
...+|.|||.|..|..+|..|.+.|++|+++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998763
No 400
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.73 E-value=0.024 Score=50.77 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~ 92 (300)
..+|.|||.|..|+.+|..|++. |++|+++|++..
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 35899999999999999999998 789999998753
No 401
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.70 E-value=0.029 Score=45.54 Aligned_cols=35 Identities=23% Similarity=0.431 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35799999999999999999999998 789999875
No 402
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.68 E-value=0.036 Score=46.22 Aligned_cols=35 Identities=31% Similarity=0.319 Sum_probs=31.7
Q ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVG-AGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIG-gG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.||| +|..|.+.|..|.+.|++|+++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 35799999 999999999999999999999998753
No 403
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.67 E-value=0.038 Score=44.99 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC----CcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLG----IGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G----~~V~viE~~~~~ 93 (300)
..+|.|||+|..|...|..|.+.| .+|+++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 357999999999999999999999 699999988653
No 404
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.67 E-value=0.036 Score=47.90 Aligned_cols=36 Identities=28% Similarity=0.438 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|||+|.+|..+|..+...|.+|+++|++..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998753
No 405
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.67 E-value=0.028 Score=46.82 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|.+.|++|.++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 406
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.66 E-value=0.036 Score=43.55 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=30.0
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVG-AGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIG-gG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+|+||| +|..|...|..|.+.|++|++++|+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999875
No 407
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.63 E-value=0.042 Score=45.47 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=31.0
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
.+|.|||+ |..|...|..|.+.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999875
No 408
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.61 E-value=0.031 Score=47.16 Aligned_cols=32 Identities=34% Similarity=0.449 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
+|.|||+|..|..+|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 68999999999999999999999 999999875
No 409
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.60 E-value=0.035 Score=49.64 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+.+|.|||.|..|..+|..|++.|++|++++|.+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 457899999999999999999999999999998753
No 410
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.59 E-value=0.044 Score=44.87 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+++|+|+|-+|-++|+.|.+.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57899999999999999999999999999998864
No 411
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.57 E-value=0.043 Score=49.25 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+..+|.|||.|..|..+|..|++.|++|++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457999999999999999999999999999999864
No 412
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.56 E-value=0.05 Score=44.94 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI---GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~---~V~viE~~~~ 92 (300)
..+|.|||+|-.|.+.|..|.+.|+ +|+++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999999 9999998874
No 413
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.55 E-value=0.044 Score=48.94 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999874
No 414
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.50 E-value=0.041 Score=46.42 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC----CcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLG----IGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G----~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|.+.| .+|++++|+..
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 457999999999999999999999 79999998763
No 415
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.49 E-value=0.016 Score=46.50 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|||+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34689999999999999999999999 999998864
No 416
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.47 E-value=0.03 Score=49.91 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~~ 92 (300)
.+|.|||.|..|+.+|..|++. |++|+++|++..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999999 899999998753
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.46 E-value=0.041 Score=45.28 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999875
No 418
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.46 E-value=0.039 Score=46.46 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|+|||+|.+|..+|+.|...|+ ++.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45799999999999999999999886 899999764
No 419
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.45 E-value=0.043 Score=51.69 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 5799999999999999999999999999998864
No 420
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.43 E-value=0.035 Score=47.97 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG-------IGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G-------~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|++.| .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998865
No 421
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.42 E-value=0.031 Score=49.09 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+.-|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 46789999999999999999999999999999874
No 422
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.42 E-value=0.012 Score=47.11 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~ 90 (300)
...+|.|||.|..|.++|..|.+.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3458999999999999999999999999999874
No 423
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.39 E-value=0.021 Score=49.16 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+|.|||+|..|...|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999875
No 424
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.38 E-value=0.024 Score=48.47 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG-------IGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G-------~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|++.| .+|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 89999998875
No 425
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.34 E-value=0.043 Score=45.56 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 689999999999999999999999999998764
No 426
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.34 E-value=0.041 Score=47.08 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 35799999999999999999999998 799999765
No 427
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.33 E-value=0.07 Score=43.95 Aligned_cols=36 Identities=28% Similarity=0.226 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
...+++|+|+|-+|-++|..|.+.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 35789999999999999999999999 8999998864
No 428
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.32 E-value=0.042 Score=45.96 Aligned_cols=35 Identities=23% Similarity=0.518 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~ 92 (300)
..+|.|||||..|..+|+.|...|+ +|.++|.+..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4689999999999999999999998 9999998764
No 429
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.32 E-value=0.046 Score=45.57 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+|+|||+|.+|.++|..|.+.|. +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999998 899999875
No 430
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.32 E-value=0.039 Score=45.91 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998753
No 431
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.27 E-value=0.053 Score=43.25 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=32.2
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|.|| |..|..++..|.++|++|+++.|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3568999998 99999999999999999999999764
No 432
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.25 E-value=0.049 Score=45.83 Aligned_cols=35 Identities=26% Similarity=0.526 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|+|||+|..|.++|+.|...|+ +|.++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998886 799999875
No 433
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.25 E-value=0.049 Score=45.97 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
..+|.|||+|..|..+|+.|+..|+ ++.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999865
No 434
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.25 E-value=0.044 Score=44.65 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G-~~V~viE~~~ 91 (300)
+|.|||+|..|...|..|.+.| .+|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999875
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.24 E-value=0.06 Score=43.46 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC----cEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGI----GSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~----~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|.+.|+ +|.++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 579999999999999999999998 9999998763
No 436
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=94.21 E-value=0.039 Score=48.97 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|+|+|.+|..+|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35789999999999999999999999999999875
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.20 E-value=0.064 Score=41.52 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=31.4
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..|+|+|| |..|..++..|.++|.+|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 57999999 99999999999999999999999764
No 438
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.19 E-value=0.061 Score=44.91 Aligned_cols=36 Identities=28% Similarity=0.319 Sum_probs=32.4
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+...|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999998765
No 439
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.19 E-value=0.043 Score=46.03 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CcEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G--~~V~viE~~~ 91 (300)
.+|.|||+|..|..+|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 6899999875
No 440
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.17 E-value=0.045 Score=45.51 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~ 92 (300)
+|.|||+|..|.++|+.|+..|+ +|.++|+.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 69999999999999999999998 8999998763
No 441
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.16 E-value=0.061 Score=42.21 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.3
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|+|+|| |..|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 5899996 99999999999999999999999863
No 442
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.15 E-value=0.053 Score=44.68 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
.+|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 369999999999999999999998 899999875
No 443
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=94.14 E-value=0.078 Score=43.54 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....++|+|+|-+|.++|..|.+.|.+|+|+.|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999999875
No 444
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.09 E-value=0.067 Score=45.50 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGA-GIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGg-G~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|+|||+ |.+|..+|+.+...|+ +|+++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 4568999998 9999999999999996 899999864
No 445
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.08 E-value=0.052 Score=49.48 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 5789999999999999999999998 799999876
No 446
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.08 E-value=0.054 Score=45.72 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|+|||+|.+|.++|+.|...|+ ++.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 45689999999999999999999988 899999864
No 447
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.07 E-value=0.06 Score=48.20 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998763
No 448
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.06 E-value=0.051 Score=48.29 Aligned_cols=35 Identities=29% Similarity=0.211 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|||||.+|...+..|.+.|.+|+|++...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 35689999999999999999999999999999853
No 449
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.05 E-value=0.045 Score=46.72 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 46899999999999999999999999 799999765
No 450
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.03 E-value=0.048 Score=45.05 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|.|||+|..|...|..|.+ |++|+++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 69999999999999999999 999999998763
No 451
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=94.02 E-value=0.13 Score=43.25 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
....++|+|+|-+|-++|..|++.|. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 45789999999999999999999999 899999884
No 452
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.01 E-value=0.038 Score=46.10 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=28.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
..+|-+||-|..|..+|..|.+.|++|+++++++..
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 357999999999999999999999999999988753
No 453
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.99 E-value=0.054 Score=45.49 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~~ 92 (300)
+|.|||+|..|.++|+.|+..|+ +++++|....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 68999999999999999999988 8999998764
No 454
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.98 E-value=0.059 Score=43.97 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCc-EEEEecCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQAD 91 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~-V~viE~~~ 91 (300)
.+|.|||+|..|...|..|.+.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999875
No 455
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.98 E-value=0.12 Score=42.69 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
....++|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45789999999999999999999999 699998875
No 456
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.95 E-value=0.054 Score=50.97 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 45799999999999999999999999999998864
No 457
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.91 E-value=0.07 Score=44.50 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35689999999999999999999999999999875
No 458
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.90 E-value=0.077 Score=45.09 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|.+.|..|.+.|++|+++++...
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 5799999999999999999999999999998763
No 459
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.89 E-value=0.072 Score=45.07 Aligned_cols=35 Identities=23% Similarity=0.461 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
...+|.|||+|..|.++|+.|...|+ ++.++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 45789999999999999999999998 899999864
No 460
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=93.88 E-value=0.067 Score=47.06 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 5799999999999999999999999 899999764
No 461
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.88 E-value=0.072 Score=44.29 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35689999999999999999999999999999875
No 462
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=93.86 E-value=0.056 Score=49.16 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 5799999999999999999999999 799999764
No 463
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.84 E-value=0.071 Score=41.96 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=30.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|+|.|| |..|..++..|.++|++|+++.|+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ 35 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 5999998 99999999999999999999998753
No 464
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.82 E-value=0.076 Score=46.60 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 56 ~~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....+|+|+|+|..|..++..+.+.|++|+++|..+.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3457899999999999999999999999999997643
No 465
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.82 E-value=0.069 Score=48.80 Aligned_cols=35 Identities=34% Similarity=0.454 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+++|||+|-.|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 78999999999999999999999999999999864
No 466
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.81 E-value=0.035 Score=48.43 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH-cCCcEEEEe
Q 022277 59 EDIVIVGAGIAGLATAVSLQR-LGIGSLVIE 88 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~-~G~~V~viE 88 (300)
.+|.|||+|..|...|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999999
No 467
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.80 E-value=0.079 Score=43.02 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
+++|||+|-+|-+++..|.+.|. +|+|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999999 899999875
No 468
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.78 E-value=0.061 Score=44.29 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
..+|+|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999999875
No 469
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.76 E-value=0.077 Score=47.37 Aligned_cols=35 Identities=17% Similarity=0.344 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 36899999999999999999999999999998753
No 470
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.75 E-value=0.056 Score=47.14 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....|+|||.|.+|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45789999999999999999999999999999875
No 471
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.71 E-value=0.082 Score=43.79 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=30.7
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
+|+|.|| |..|-.++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999998 99999999999999999999988764
No 472
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.66 E-value=0.071 Score=47.63 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+|.|||+|..|...|..|++.|++|++++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999999875
No 473
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=93.63 E-value=0.1 Score=43.20 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....++|+|+|-+|.++|..|++.| +|++++|..
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 3468999999999999999999999 999998864
No 474
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.62 E-value=0.14 Score=42.26 Aligned_cols=35 Identities=20% Similarity=0.169 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+++|+|+|-+|-++++.|.+.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45789999999999999999999998 899999875
No 475
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.55 E-value=0.14 Score=43.61 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
....|+|+|+|..|+.++..+...|.+|+++++++.-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~ 212 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHK 212 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 4568999999999999988888889999999987653
No 476
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.55 E-value=0.16 Score=41.86 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
....++|+|+|-+|-+++..|.+.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 45789999999999999999999997 899999875
No 477
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.53 E-value=0.11 Score=40.85 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=30.4
Q ss_pred CcEEEECC-CHHHHHHHHHHH-HcCCcEEEEecCCC
Q 022277 59 EDIVIVGA-GIAGLATAVSLQ-RLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGg-G~aGl~~A~~L~-~~G~~V~viE~~~~ 92 (300)
..|+|.|| |..|..++..|. +.|++|+++.|+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 45999995 999999999999 89999999998764
No 478
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.46 E-value=0.062 Score=48.03 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|||+|..|..+|..|...|.+|+++|+.+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999999999999999999999999998763
No 479
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.42 E-value=0.099 Score=44.27 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.1
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4578999998 99999999999999999999998764
No 480
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.39 E-value=0.18 Score=42.17 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
...+++|+|+|-+|-++++.|.+.|. +|+|+.|..
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 45789999999999999999999999 799999884
No 481
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.35 E-value=0.098 Score=42.66 Aligned_cols=32 Identities=31% Similarity=0.466 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
+++|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999875
No 482
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.32 E-value=0.072 Score=42.09 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=31.8
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 59 ~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
.+|+|.|| |..|..++..|.++|++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 57999996 999999999999999999999998653
No 483
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.31 E-value=0.1 Score=42.81 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
....++|+|+|-+|-++|..|.+.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45789999999999999999999997 899998875
No 484
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=93.31 E-value=0.078 Score=45.74 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=32.6
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCC---cEEEEecCC
Q 022277 57 RKEDIVIVGA-GIAGLATAVSLQRLGI---GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGg-G~aGl~~A~~L~~~G~---~V~viE~~~ 91 (300)
...+|+|||| |.+|+.++..+...|. +|+++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4689999999 9999999999999998 999999876
No 485
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=93.31 E-value=0.073 Score=50.12 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
..+|.|||+|..|...|+.++..|++|+++|.++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 36899999999999999999999999999998764
No 486
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.27 E-value=0.12 Score=44.67 Aligned_cols=36 Identities=28% Similarity=0.427 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|||+|..|..++..+.+.|++|++++..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 456899999999999999999999999999998654
No 487
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.27 E-value=0.075 Score=43.15 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|.+.|.+|.++++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~ 37 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLE 37 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHH
Confidence 4799999999999999999999999999998753
No 488
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.16 E-value=0.091 Score=43.44 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCcEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~--G~~V~viE~~~ 91 (300)
..+|.|||+|..|.+.|..|.+. |.+|+++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 45799999999999999999988 67999999875
No 489
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.16 E-value=0.12 Score=44.78 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
....|+|||+|..|..++..+.+.|++|++++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 346899999999999999999999999999997653
No 490
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.10 E-value=0.11 Score=44.78 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~~ 93 (300)
...+++|+|||..|..+|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 4679999999999999999999999999999988754
No 491
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.09 E-value=0.08 Score=43.08 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=28.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEEec
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQ 89 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~~V~viE~ 89 (300)
+|.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 492
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.09 E-value=0.11 Score=43.61 Aligned_cols=33 Identities=42% Similarity=0.543 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 60 DIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 60 dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
+|.|||+|..|..+|+.|+..|+ ++.++|.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~ 34 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPG 34 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChh
Confidence 58999999999999999999898 6999998754
No 493
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.08 E-value=0.22 Score=41.13 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 57 RKEDIVIVG-AGIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIG-gG~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
....++|+| +|.+|.++|..|.+.|.+|+++.|..
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 346899999 89999999999999999999999864
No 494
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.07 E-value=0.084 Score=48.56 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
..+|+|||+|-.|+.+|..|++.|+ +++|+|...
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 4799999999999999999999999 899999775
No 495
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=93.06 E-value=0.2 Score=43.92 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC---cEEEEe----cC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI---GSLVIE----QA 90 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~---~V~viE----~~ 90 (300)
...+|+|+|+|-+|.++|..|.+.|. +|+|++ |.
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~ 225 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKP 225 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCc
Confidence 45789999999999999999999998 799999 76
No 496
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.01 E-value=0.14 Score=44.19 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~~ 92 (300)
....|+|+|+|..|+.++..+...|. +|+++++++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 45689999999999999888888899 8999997764
No 497
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.01 E-value=0.13 Score=43.70 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=31.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCcEEEEecCC
Q 022277 58 KEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQAD 91 (300)
Q Consensus 58 ~~dVvIIGg-G~aGl~~A~~L~~~G~~V~viE~~~ 91 (300)
...|+|.|| |..|..++..|.+.|++|+++.|..
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999999 9999999999999999999999976
No 498
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.99 E-value=0.1 Score=45.60 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~-~V~viE~~~ 91 (300)
....|+|||+|.+|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45789999999999999999999999 899999875
No 499
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.98 E-value=0.061 Score=44.55 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCcEEEEecCCC
Q 022277 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (300)
Q Consensus 59 ~dVvIIGgG~aGl~~A~~L~~~G~~V~viE~~~~ 92 (300)
.+|.|||+|..|...|..|.+.|++|++++ ++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 479999999999999999999999999998 553
No 500
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.95 E-value=0.11 Score=43.64 Aligned_cols=35 Identities=23% Similarity=0.521 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--cEEEEecCC
Q 022277 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (300)
Q Consensus 57 ~~~dVvIIGgG~aGl~~A~~L~~~G~--~V~viE~~~ 91 (300)
+..+|+|||+|.+|.++|+.|...++ ++.++|.+.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34789999999999999999999887 899999864
Done!