Query 022278
Match_columns 300
No_of_seqs 299 out of 1090
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 16:49:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022278.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022278hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2q_A Ureidoglycine aminohydr 100.0 4.2E-81 1.4E-85 575.5 29.9 262 38-300 4-266 (266)
2 1sfn_A Conserved hypothetical 100.0 4.6E-60 1.6E-64 431.0 29.8 241 57-300 1-245 (246)
3 1sq4_A GLXB, glyoxylate-induce 100.0 3.2E-58 1.1E-62 426.4 26.5 241 58-300 18-271 (278)
4 1rc6_A Hypothetical protein YL 100.0 1.5E-52 5E-57 383.8 24.6 248 52-300 7-260 (261)
5 1sef_A Conserved hypothetical 100.0 9.3E-50 3.2E-54 368.0 26.1 244 56-300 14-263 (274)
6 3rns_A Cupin 2 conserved barre 100.0 1.3E-28 4.4E-33 220.9 23.2 182 101-291 34-222 (227)
7 3h7j_A Bacilysin biosynthesis 100.0 3.2E-27 1.1E-31 213.7 21.7 190 89-293 23-218 (243)
8 1y3t_A Hypothetical protein YX 99.9 3.8E-26 1.3E-30 213.6 22.1 214 72-292 16-289 (337)
9 2vqa_A SLL1358 protein, MNCA; 99.9 9.1E-24 3.1E-28 200.2 24.7 203 90-295 36-314 (361)
10 1j58_A YVRK protein; cupin, de 99.9 1.7E-23 5.7E-28 200.4 21.9 190 102-294 77-336 (385)
11 3bu7_A Gentisate 1,2-dioxygena 99.9 1.5E-22 5.1E-27 195.4 22.4 192 101-294 120-368 (394)
12 1juh_A Quercetin 2,3-dioxygena 99.9 2.6E-22 8.9E-27 191.0 20.3 199 90-292 33-323 (350)
13 2bnm_A Epoxidase; oxidoreducta 99.9 3.8E-23 1.3E-27 180.0 10.7 148 27-175 24-197 (198)
14 2d40_A Z3393, putative gentisa 99.9 8.3E-22 2.8E-26 188.0 20.5 189 102-294 98-339 (354)
15 1y9q_A Transcriptional regulat 99.9 8.8E-22 3E-26 170.9 8.2 145 27-176 25-178 (192)
16 3nw4_A Gentisate 1,2-dioxygena 99.8 3.7E-18 1.3E-22 163.1 23.0 200 91-294 84-350 (368)
17 1fxz_A Glycinin G1; proglycini 99.7 5.8E-17 2E-21 159.9 19.2 73 219-293 337-416 (476)
18 3kgz_A Cupin 2 conserved barre 99.7 4.8E-17 1.7E-21 138.1 14.0 106 191-298 10-121 (156)
19 1uij_A Beta subunit of beta co 99.7 3.4E-16 1.2E-20 152.2 18.7 192 103-298 48-344 (416)
20 2phl_A Phaseolin; plant SEED s 99.7 4.5E-16 1.5E-20 150.4 19.0 190 103-299 51-328 (397)
21 2ea7_A 7S globulin-1; beta bar 99.7 6.2E-16 2.1E-20 151.1 19.7 190 103-297 60-359 (434)
22 2cav_A Protein (canavalin); vi 99.7 3.8E-16 1.3E-20 153.0 17.8 189 103-295 85-370 (445)
23 2e9q_A 11S globulin subunit be 99.7 1.5E-15 5.1E-20 149.2 21.7 192 102-295 61-402 (459)
24 3ht1_A REMF protein; cupin fol 99.7 2.7E-16 9.3E-21 129.1 12.7 109 187-296 2-116 (145)
25 3c3v_A Arachin ARAH3 isoform; 99.7 1.6E-15 5.5E-20 150.4 20.5 73 219-293 371-450 (510)
26 3jzv_A Uncharacterized protein 99.7 4E-16 1.4E-20 133.8 13.8 109 188-298 16-130 (166)
27 2d5f_A Glycinin A3B4 subunit; 99.7 2.3E-15 7.8E-20 149.1 19.1 73 220-294 367-446 (493)
28 3ibm_A Cupin 2, conserved barr 99.7 1.9E-15 6.3E-20 129.4 15.0 106 192-298 20-134 (167)
29 1lr5_A Auxin binding protein 1 99.6 2.6E-15 8.8E-20 127.0 13.5 109 185-294 4-124 (163)
30 2vpv_A Protein MIF2, MIF2P; nu 99.6 9E-16 3.1E-20 131.7 10.6 74 102-176 86-163 (166)
31 3myx_A Uncharacterized protein 99.6 1.7E-13 5.7E-18 123.9 24.1 174 102-283 45-229 (238)
32 3o14_A Anti-ecfsigma factor, C 99.6 6.3E-14 2.2E-18 125.6 19.7 201 71-293 11-211 (223)
33 1sfn_A Conserved hypothetical 99.6 1.4E-14 4.9E-19 131.1 15.5 94 84-178 145-241 (246)
34 2pyt_A Ethanolamine utilizatio 99.6 1.1E-14 3.7E-19 120.5 10.5 91 81-176 36-126 (133)
35 3es1_A Cupin 2, conserved barr 99.6 1.4E-14 4.7E-19 125.1 10.7 78 102-181 77-157 (172)
36 1o4t_A Putative oxalate decarb 99.5 4.7E-14 1.6E-18 115.6 11.3 88 204-292 39-129 (133)
37 2fqp_A Hypothetical protein BP 99.5 2.6E-14 8.7E-19 110.8 9.0 75 101-176 15-94 (97)
38 1o4t_A Putative oxalate decarb 99.5 3.8E-14 1.3E-18 116.2 9.9 103 72-175 19-130 (133)
39 1vj2_A Novel manganese-contain 99.5 9.1E-14 3.1E-18 112.7 11.3 89 204-293 32-120 (126)
40 3kgz_A Cupin 2 conserved barre 99.5 1.2E-13 3.9E-18 117.2 11.9 88 87-176 28-117 (156)
41 1vj2_A Novel manganese-contain 99.5 9.9E-14 3.4E-18 112.5 11.0 91 84-175 28-120 (126)
42 2fqp_A Hypothetical protein BP 99.5 5.1E-14 1.8E-18 109.1 8.9 74 218-292 16-92 (97)
43 3ibm_A Cupin 2, conserved barr 99.5 4.6E-13 1.6E-17 114.4 15.4 89 87-176 36-130 (167)
44 3lwc_A Uncharacterized protein 99.5 1E-13 3.5E-18 112.4 9.9 84 92-177 28-112 (119)
45 3h8u_A Uncharacterized conserv 99.5 1.2E-13 4.2E-18 111.0 10.3 74 219-293 38-113 (125)
46 2bnm_A Epoxidase; oxidoreducta 99.5 3.2E-13 1.1E-17 117.0 13.6 89 204-292 101-196 (198)
47 2f4p_A Hypothetical protein TM 99.5 2.4E-13 8.3E-18 113.5 12.2 99 193-293 21-121 (147)
48 3kgl_A Cruciferin; 11S SEED gl 99.5 2.3E-12 7.8E-17 126.5 20.8 192 102-296 41-404 (466)
49 3qac_A 11S globulin SEED stora 99.5 2.4E-12 8.3E-17 126.3 20.8 192 102-295 48-403 (465)
50 3ht1_A REMF protein; cupin fol 99.5 1.1E-13 3.8E-18 113.4 9.4 93 85-178 19-116 (145)
51 3i7d_A Sugar phosphate isomera 99.5 3.6E-13 1.2E-17 114.5 12.8 89 207-295 30-121 (163)
52 3l2h_A Putative sugar phosphat 99.5 3.1E-13 1.1E-17 113.8 12.0 82 213-294 39-122 (162)
53 4i4a_A Similar to unknown prot 99.5 5.4E-13 1.9E-17 107.4 12.5 86 206-292 19-105 (128)
54 4axo_A EUTQ, ethanolamine util 99.5 1.7E-13 6E-18 115.8 9.9 100 74-177 37-136 (151)
55 3fjs_A Uncharacterized protein 99.5 1.9E-13 6.6E-18 109.3 9.5 73 101-174 33-105 (114)
56 4e2g_A Cupin 2 conserved barre 99.5 3.4E-13 1.1E-17 108.4 10.8 95 192-292 16-111 (126)
57 2b8m_A Hypothetical protein MJ 99.5 2.3E-13 8E-18 108.2 9.6 76 219-295 26-102 (117)
58 3l2h_A Putative sugar phosphat 99.5 2.4E-13 8.1E-18 114.6 10.2 85 93-178 34-124 (162)
59 3fjs_A Uncharacterized protein 99.5 3.4E-13 1.1E-17 107.9 10.5 76 219-295 35-110 (114)
60 3jzv_A Uncharacterized protein 99.5 4E-13 1.4E-17 115.0 11.5 89 87-177 37-127 (166)
61 3i7d_A Sugar phosphate isomera 99.5 2.8E-13 9.4E-18 115.3 10.4 87 91-178 29-122 (163)
62 1sef_A Conserved hypothetical 99.5 4.7E-13 1.6E-17 122.7 12.5 88 88-176 166-257 (274)
63 2gu9_A Tetracenomycin polyketi 99.4 4.2E-13 1.4E-17 104.8 10.3 75 218-292 19-95 (113)
64 1v70_A Probable antibiotics sy 99.4 4.1E-13 1.4E-17 103.0 10.1 85 205-293 16-101 (105)
65 3s7i_A Allergen ARA H 1, clone 99.4 4.2E-12 1.4E-16 123.4 18.9 193 102-299 42-370 (418)
66 3fz3_A Prunin; TREE NUT allerg 99.4 5.9E-12 2E-16 124.7 20.2 74 219-294 393-473 (531)
67 2pfw_A Cupin 2, conserved barr 99.4 7.2E-13 2.5E-17 104.8 10.9 84 89-176 22-105 (116)
68 3lwc_A Uncharacterized protein 99.4 7.2E-13 2.5E-17 107.3 11.0 85 204-291 24-108 (119)
69 2ozj_A Cupin 2, conserved barr 99.4 1.1E-12 3.6E-17 103.9 11.7 74 102-176 36-109 (114)
70 1sq4_A GLXB, glyoxylate-induce 99.4 5.3E-13 1.8E-17 123.0 11.3 94 201-294 46-143 (278)
71 2pfw_A Cupin 2, conserved barr 99.4 2.2E-12 7.5E-17 101.9 13.2 94 192-292 10-103 (116)
72 1v70_A Probable antibiotics sy 99.4 7.4E-13 2.5E-17 101.6 9.9 75 101-176 25-102 (105)
73 3ksc_A LEGA class, prolegumin; 99.4 4.3E-12 1.5E-16 125.4 17.9 75 219-295 357-438 (496)
74 3es1_A Cupin 2, conserved barr 99.4 9.3E-13 3.2E-17 113.6 11.6 73 218-292 77-150 (172)
75 1dgw_A Canavalin; duplicated s 99.4 6.9E-13 2.3E-17 114.5 10.5 79 218-297 39-122 (178)
76 4e2q_A Ureidoglycine aminohydr 99.4 6.2E-13 2.1E-17 122.0 10.8 98 194-294 43-142 (266)
77 2ozi_A Hypothetical protein RP 99.4 1.6E-13 5.4E-18 107.7 5.8 72 219-291 16-91 (98)
78 1rc6_A Hypothetical protein YL 99.4 9.2E-13 3.2E-17 119.7 11.8 101 194-294 32-134 (261)
79 3h8u_A Uncharacterized conserv 99.4 1.7E-12 5.6E-17 104.3 11.5 76 102-177 37-115 (125)
80 1y9q_A Transcriptional regulat 99.4 9.8E-13 3.3E-17 113.6 10.5 88 204-292 88-176 (192)
81 3cew_A Uncharacterized cupin p 99.4 1.2E-12 4.1E-17 105.4 10.3 76 217-292 23-99 (125)
82 3lag_A Uncharacterized protein 99.4 1.7E-13 5.9E-18 107.3 5.1 73 219-291 16-91 (98)
83 2gu9_A Tetracenomycin polyketi 99.4 1.8E-12 6E-17 101.2 10.9 75 101-176 18-97 (113)
84 1yhf_A Hypothetical protein SP 99.4 4.2E-12 1.4E-16 100.1 12.4 86 204-293 27-112 (115)
85 4e2g_A Cupin 2 conserved barre 99.4 1.4E-12 4.7E-17 104.8 9.6 76 101-177 38-114 (126)
86 1yhf_A Hypothetical protein SP 99.4 2.2E-12 7.4E-17 101.8 10.1 82 90-175 29-110 (115)
87 2oa2_A BH2720 protein; 1017534 99.4 2.1E-12 7E-17 107.6 10.5 75 219-294 42-123 (148)
88 2vqa_A SLL1358 protein, MNCA; 99.4 1.8E-12 6E-17 122.5 11.1 143 28-177 151-314 (361)
89 1uij_A Beta subunit of beta co 99.4 1.5E-12 5.1E-17 126.6 10.0 77 219-296 48-129 (416)
90 1j58_A YVRK protein; cupin, de 99.4 1.2E-12 4E-17 125.0 9.0 142 27-177 175-337 (385)
91 3bu7_A Gentisate 1,2-dioxygena 99.4 2.5E-12 8.6E-17 124.0 11.3 77 217-294 120-198 (394)
92 2b8m_A Hypothetical protein MJ 99.4 3.9E-12 1.3E-16 101.0 10.4 76 102-178 25-103 (117)
93 3nw4_A Gentisate 1,2-dioxygena 99.4 1.6E-12 5.3E-17 124.3 9.4 77 218-295 101-178 (368)
94 2xlg_A SLL1785 protein, CUCA; 99.3 2.7E-12 9.2E-17 116.1 10.1 82 211-292 34-136 (239)
95 2f4p_A Hypothetical protein TM 99.3 7.3E-12 2.5E-16 104.5 11.8 86 90-176 33-122 (147)
96 2ozj_A Cupin 2, conserved barr 99.3 1.1E-11 3.6E-16 98.1 12.2 79 207-291 28-106 (114)
97 2oa2_A BH2720 protein; 1017534 99.3 8E-12 2.7E-16 104.0 11.8 76 101-177 40-124 (148)
98 2ea7_A 7S globulin-1; beta bar 99.3 2.4E-12 8.4E-17 125.6 9.6 77 219-296 60-141 (434)
99 4h7l_A Uncharacterized protein 99.3 6.6E-12 2.3E-16 106.6 10.8 99 186-292 15-115 (157)
100 1x82_A Glucose-6-phosphate iso 99.3 6.7E-12 2.3E-16 109.4 11.0 81 212-293 59-153 (190)
101 2vpv_A Protein MIF2, MIF2P; nu 99.3 5.3E-12 1.8E-16 108.2 10.1 74 219-292 87-161 (166)
102 2d40_A Z3393, putative gentisa 99.3 8.4E-12 2.9E-16 118.8 12.0 76 218-294 98-174 (354)
103 3h7j_A Bacilysin biosynthesis 99.3 9.4E-12 3.2E-16 112.0 11.3 88 204-296 22-110 (243)
104 1lr5_A Auxin binding protein 1 99.3 1.3E-11 4.3E-16 104.1 11.3 86 90-176 25-124 (163)
105 2cav_A Protein (canavalin); vi 99.3 6.9E-12 2.3E-16 122.8 10.4 75 219-294 85-164 (445)
106 4axo_A EUTQ, ethanolamine util 99.3 1.9E-11 6.5E-16 103.2 10.8 84 203-291 49-132 (151)
107 2pyt_A Ethanolamine utilizatio 99.3 1.6E-11 5.6E-16 101.3 10.1 82 204-291 42-123 (133)
108 1x82_A Glucose-6-phosphate iso 99.3 2.7E-11 9.3E-16 105.5 12.0 81 95-176 58-154 (190)
109 2i45_A Hypothetical protein; n 99.3 1.4E-11 4.6E-16 96.5 8.1 70 106-177 30-101 (107)
110 2q30_A Uncharacterized protein 99.2 5.3E-11 1.8E-15 92.6 11.1 67 219-286 32-101 (110)
111 4i4a_A Similar to unknown prot 99.2 6.4E-11 2.2E-15 95.2 11.8 73 101-174 31-105 (128)
112 2q30_A Uncharacterized protein 99.2 2E-11 6.7E-16 95.1 8.4 75 101-176 30-107 (110)
113 3rns_A Cupin 2 conserved barre 99.2 3.7E-11 1.3E-15 107.2 10.3 74 102-176 151-225 (227)
114 2o8q_A Hypothetical protein; c 99.2 7.6E-11 2.6E-15 95.7 11.0 69 222-292 45-115 (134)
115 2xlg_A SLL1785 protein, CUCA; 99.2 1.7E-11 5.9E-16 110.8 7.8 83 93-175 32-137 (239)
116 1y3t_A Hypothetical protein YX 99.2 8.8E-11 3E-15 109.2 12.7 86 89-175 202-290 (337)
117 3cew_A Uncharacterized cupin p 99.2 3.2E-11 1.1E-15 97.0 8.4 84 94-178 15-103 (125)
118 1dgw_A Canavalin; duplicated s 99.2 2.8E-11 9.6E-16 104.3 8.5 75 102-177 39-120 (178)
119 1fi2_A Oxalate oxidase, germin 99.2 6.6E-11 2.3E-15 103.7 9.5 76 218-294 70-154 (201)
120 2o8q_A Hypothetical protein; c 99.2 9.2E-11 3.1E-15 95.2 9.4 73 101-174 38-115 (134)
121 2e9q_A 11S globulin subunit be 99.2 7.6E-11 2.6E-15 115.8 10.5 88 208-296 48-164 (459)
122 1fxz_A Glycinin G1; proglycini 99.2 6.4E-11 2.2E-15 116.8 10.0 88 208-296 33-150 (476)
123 2d5f_A Glycinin A3B4 subunit; 99.2 7.9E-11 2.7E-15 116.6 10.5 89 207-296 29-150 (493)
124 2opk_A Hypothetical protein; p 99.2 1.6E-10 5.4E-15 92.1 10.3 62 112-174 38-107 (112)
125 1o5u_A Novel thermotoga mariti 99.2 7.8E-11 2.7E-15 92.8 8.1 66 224-292 35-101 (101)
126 3bcw_A Uncharacterized protein 99.2 1.4E-10 4.9E-15 94.5 9.9 73 102-175 47-119 (123)
127 3c3v_A Arachin ARAH3 isoform; 99.2 6.9E-11 2.4E-15 117.2 9.2 90 207-297 32-164 (510)
128 2o1q_A Putative acetyl/propion 99.1 4.4E-11 1.5E-15 99.9 6.7 90 191-282 12-108 (145)
129 2phl_A Phaseolin; plant SEED s 99.1 1.1E-10 3.8E-15 112.7 9.7 76 219-295 51-137 (397)
130 2ozi_A Hypothetical protein RP 99.1 4.1E-11 1.4E-15 93.9 5.2 75 101-175 14-93 (98)
131 4b29_A Dimethylsulfoniopropion 99.1 1.7E-10 5.8E-15 102.4 9.5 77 210-288 119-199 (217)
132 1o5u_A Novel thermotoga mariti 99.1 1.2E-10 4.1E-15 91.7 7.6 64 108-174 35-99 (101)
133 4b29_A Dimethylsulfoniopropion 99.1 2E-10 6.8E-15 102.0 9.7 92 91-183 116-211 (217)
134 2opk_A Hypothetical protein; p 99.1 4.7E-10 1.6E-14 89.3 9.5 69 222-291 33-106 (112)
135 1fi2_A Oxalate oxidase, germin 99.1 3.3E-10 1.1E-14 99.2 9.2 76 101-176 69-154 (201)
136 2qnk_A 3-hydroxyanthranilate 3 99.1 4.5E-09 1.5E-13 96.1 16.6 182 113-300 40-285 (286)
137 3d82_A Cupin 2, conserved barr 99.1 1E-09 3.6E-14 84.0 10.4 60 116-176 41-101 (102)
138 2qdr_A Uncharacterized protein 99.0 7.4E-09 2.5E-13 93.4 16.6 166 93-278 82-264 (303)
139 2qjv_A Uncharacterized IOLB-li 99.0 3E-08 1E-12 90.8 20.9 173 103-282 28-234 (270)
140 3ebr_A Uncharacterized RMLC-li 99.0 1.1E-09 3.7E-14 93.1 10.2 97 192-293 13-114 (159)
141 2i45_A Hypothetical protein; n 99.0 4.4E-10 1.5E-14 87.8 7.1 65 224-292 32-98 (107)
142 3qac_A 11S globulin SEED stora 99.0 1.3E-09 4.6E-14 106.9 10.2 90 207-297 34-168 (465)
143 3lag_A Uncharacterized protein 99.0 5.2E-10 1.8E-14 87.3 5.4 73 102-175 15-93 (98)
144 3d82_A Cupin 2, conserved barr 99.0 2.1E-09 7.4E-14 82.2 8.6 68 220-292 31-99 (102)
145 3cjx_A Protein of unknown func 98.9 4.1E-09 1.4E-13 90.1 10.4 105 187-294 9-117 (165)
146 1juh_A Quercetin 2,3-dioxygena 98.9 3.8E-09 1.3E-13 100.1 10.9 84 207-292 34-126 (350)
147 4h7l_A Uncharacterized protein 98.9 6.1E-09 2.1E-13 88.3 11.0 78 94-176 37-117 (157)
148 3bcw_A Uncharacterized protein 98.9 3E-09 1E-13 86.6 8.2 72 219-292 48-120 (123)
149 3ksc_A LEGA class, prolegumin; 98.8 1E-08 3.5E-13 101.4 9.6 89 208-297 31-148 (496)
150 2q1z_B Anti-sigma factor CHRR, 98.8 3E-08 1E-12 86.7 10.3 94 190-292 99-192 (195)
151 3cjx_A Protein of unknown func 98.8 1.7E-08 5.9E-13 86.2 8.2 103 71-176 10-117 (165)
152 2o1q_A Putative acetyl/propion 98.8 8.1E-09 2.8E-13 86.1 5.9 83 89-174 30-116 (145)
153 2arc_A ARAC, arabinose operon 98.7 6.6E-08 2.3E-12 79.7 10.5 80 212-291 4-89 (164)
154 1vr3_A Acireductone dioxygenas 98.7 4.8E-08 1.6E-12 85.3 10.0 69 221-290 75-158 (191)
155 3s7i_A Allergen ARA H 1, clone 98.7 3.7E-08 1.3E-12 95.7 10.1 79 218-297 42-125 (418)
156 3kgl_A Cruciferin; 11S SEED gl 98.7 4.5E-08 1.5E-12 96.1 10.5 89 208-297 28-183 (466)
157 1zrr_A E-2/E-2' protein; nicke 98.6 2.3E-08 7.8E-13 86.6 4.7 55 236-290 95-153 (179)
158 3st7_A Capsular polysaccharide 98.6 7.6E-08 2.6E-12 90.1 7.9 74 221-294 273-354 (369)
159 3fz3_A Prunin; TREE NUT allerg 98.5 2.8E-07 9.4E-12 91.4 10.2 89 208-297 33-210 (531)
160 1yfu_A 3-hydroxyanthranilate-3 98.5 2.5E-07 8.5E-12 79.2 8.3 70 111-180 42-115 (174)
161 3ebr_A Uncharacterized RMLC-li 98.5 3E-07 1E-11 77.9 8.6 98 73-174 11-113 (159)
162 1tq5_A Protein YHHW; bicupin, 98.4 1.7E-05 5.9E-10 71.5 18.4 167 108-292 45-226 (242)
163 2q1z_B Anti-sigma factor CHRR, 98.4 9.4E-07 3.2E-11 77.1 9.5 67 104-175 125-193 (195)
164 1xru_A 4-deoxy-L-threo-5-hexos 98.4 2.2E-05 7.6E-10 72.0 18.4 162 121-290 76-259 (282)
165 3o14_A Anti-ecfsigma factor, C 98.4 1.2E-06 4E-11 78.2 9.5 90 192-288 15-104 (223)
166 2y0o_A Probable D-lyxose ketol 98.4 1.1E-06 3.8E-11 75.6 8.9 78 220-298 53-157 (175)
167 1zvf_A 3-hydroxyanthranilate 3 98.4 1.1E-06 3.8E-11 75.2 8.6 68 112-179 42-116 (176)
168 1ywk_A 4-deoxy-L-threo-5-hexos 98.4 4E-05 1.4E-09 70.5 19.4 175 108-290 61-259 (289)
169 3bal_A Acetylacetone-cleaving 98.4 7.6E-07 2.6E-11 75.1 7.2 86 192-279 15-106 (153)
170 1vr3_A Acireductone dioxygenas 98.4 1.5E-06 5.2E-11 75.8 9.3 68 118-187 98-170 (191)
171 2p17_A Pirin-like protein; GK1 98.3 9.1E-05 3.1E-09 68.0 20.8 196 90-292 22-240 (277)
172 3es4_A Uncharacterized protein 98.3 7E-06 2.4E-10 66.1 11.7 72 103-175 41-112 (116)
173 2arc_A ARAC, arabinose operon 98.3 2.4E-06 8.2E-11 70.2 9.2 67 108-175 17-91 (164)
174 3bal_A Acetylacetone-cleaving 98.3 1.3E-06 4.4E-11 73.7 6.5 103 70-174 10-118 (153)
175 2vec_A YHAK, pirin-like protei 98.3 0.00013 4.6E-09 66.2 20.3 169 108-292 68-252 (256)
176 1j1l_A Pirin; beta sandwich, c 98.2 4.9E-05 1.7E-09 70.3 17.1 186 104-292 39-241 (290)
177 2y0o_A Probable D-lyxose ketol 98.2 5.2E-06 1.8E-10 71.4 8.5 67 103-170 52-147 (175)
178 3eqe_A Putative cystein deoxyg 98.1 1.8E-05 6.2E-10 67.8 11.2 76 102-180 67-153 (171)
179 2gm6_A Cysteine dioxygenase ty 98.1 1.2E-05 4.1E-10 70.9 10.4 81 92-172 67-162 (208)
180 2vec_A YHAK, pirin-like protei 98.1 1E-05 3.5E-10 73.6 10.0 79 212-290 54-138 (256)
181 3myx_A Uncharacterized protein 98.0 3.4E-05 1.2E-09 69.4 11.7 72 102-174 165-236 (238)
182 1tq5_A Protein YHHW; bicupin, 97.9 3.5E-05 1.2E-09 69.5 9.9 72 219-290 40-115 (242)
183 1zrr_A E-2/E-2' protein; nicke 97.9 2E-06 6.8E-11 74.3 1.5 66 118-184 94-162 (179)
184 2gm6_A Cysteine dioxygenase ty 97.9 7.8E-05 2.7E-09 65.7 10.8 85 207-292 66-165 (208)
185 3es4_A Uncharacterized protein 97.9 0.00017 5.7E-09 58.0 11.5 93 190-284 6-105 (116)
186 3gbg_A TCP pilus virulence reg 97.9 3E-05 1E-09 69.6 7.7 70 218-288 5-80 (276)
187 3eqe_A Putative cystein deoxyg 97.8 9.6E-05 3.3E-09 63.2 10.4 81 207-290 58-148 (171)
188 1yfu_A 3-hydroxyanthranilate-3 97.8 4.4E-05 1.5E-09 65.3 8.0 56 227-283 42-101 (174)
189 1qwr_A Mannose-6-phosphate iso 97.8 0.00017 5.8E-09 67.4 12.2 128 143-276 158-304 (319)
190 3g7d_A PHPD; non heme Fe(II) d 97.7 2.2E-05 7.5E-10 73.2 4.6 140 23-167 240-400 (443)
191 3uss_A Putative uncharacterize 97.7 0.00021 7.2E-09 63.1 10.6 73 93-165 62-146 (211)
192 2qnk_A 3-hydroxyanthranilate 3 97.7 0.0001 3.5E-09 67.5 8.6 75 101-177 204-278 (286)
193 2wfp_A Mannose-6-phosphate iso 97.7 0.00037 1.3E-08 67.0 12.9 126 143-276 240-377 (394)
194 3d0j_A Uncharacterized protein 97.6 9E-05 3.1E-09 61.2 6.1 56 121-177 47-110 (140)
195 1zvf_A 3-hydroxyanthranilate 3 97.5 0.00021 7.1E-09 61.1 7.7 62 219-282 34-103 (176)
196 3eln_A Cysteine dioxygenase ty 97.5 0.00063 2.1E-08 59.5 10.1 79 102-180 68-159 (200)
197 3qwg_A ESX-1 secretion-associa 97.4 5.3E-06 1.8E-10 67.3 -4.3 47 24-70 22-79 (123)
198 1pmi_A PMI, phosphomannose iso 97.3 0.0059 2E-07 59.4 15.8 64 218-282 355-423 (440)
199 3r1f_A ESX-1 secretion-associa 97.2 8.7E-06 3E-10 67.0 -4.7 45 25-69 25-80 (135)
200 4ghj_A Probable transcriptiona 97.2 2.5E-05 8.5E-10 61.2 -2.0 39 27-65 50-91 (101)
201 3st7_A Capsular polysaccharide 97.1 0.00076 2.6E-08 62.7 6.9 76 105-180 273-359 (369)
202 3uss_A Putative uncharacterize 97.1 0.0033 1.1E-07 55.4 10.6 80 207-287 60-153 (211)
203 3omt_A Uncharacterized protein 97.0 3.8E-05 1.3E-09 55.3 -2.1 42 28-69 23-69 (73)
204 3gbg_A TCP pilus virulence reg 97.0 0.0014 4.6E-08 58.6 7.2 71 102-174 5-84 (276)
205 3eln_A Cysteine dioxygenase ty 97.0 0.0027 9.2E-08 55.5 8.9 79 207-287 58-151 (200)
206 1zx5_A Mannosephosphate isomer 97.0 0.0014 4.7E-08 60.7 7.4 122 143-277 158-283 (300)
207 2ewt_A BLDD, putative DNA-bind 97.0 3.3E-05 1.1E-09 55.0 -2.9 42 27-68 22-70 (71)
208 2k9q_A Uncharacterized protein 96.9 3.8E-05 1.3E-09 56.0 -3.1 42 28-69 17-63 (77)
209 3s8q_A R-M controller protein; 96.9 3.7E-05 1.2E-09 56.6 -3.3 43 27-69 25-72 (82)
210 3qq6_A HTH-type transcriptiona 96.8 3.7E-05 1.3E-09 56.6 -3.6 42 28-69 25-72 (78)
211 2ofy_A Putative XRE-family tra 96.8 4.6E-05 1.6E-09 56.6 -3.2 42 28-69 29-76 (86)
212 1y7y_A C.AHDI; helix-turn-heli 96.8 7.6E-05 2.6E-09 53.3 -2.2 42 27-68 27-73 (74)
213 3kz3_A Repressor protein CI; f 96.8 6.3E-05 2.1E-09 55.3 -2.7 42 28-69 27-73 (80)
214 3d0j_A Uncharacterized protein 96.8 0.0062 2.1E-07 50.2 9.0 75 219-295 24-110 (140)
215 3g5g_A Regulatory protein; tra 96.8 5.7E-05 1.9E-09 58.5 -3.2 42 28-69 43-89 (99)
216 3t76_A VANU, transcriptional r 96.8 7.5E-05 2.6E-09 56.9 -2.6 41 28-69 39-84 (88)
217 1neq_A DNA-binding protein NER 96.7 7.2E-05 2.5E-09 55.2 -3.0 43 27-70 23-68 (74)
218 3f6w_A XRE-family like protein 96.7 6.3E-05 2.2E-09 55.3 -3.7 43 27-69 28-75 (83)
219 2wus_R RODZ, putative uncharac 96.6 8E-05 2.7E-09 59.2 -3.3 43 27-69 21-74 (112)
220 3vk0_A NHTF, transcriptional r 96.6 7.7E-05 2.6E-09 58.8 -3.5 43 27-69 35-82 (114)
221 2xi8_A Putative transcription 96.6 9.5E-05 3.3E-09 51.4 -2.7 43 27-69 15-62 (66)
222 3eus_A DNA-binding protein; st 96.6 0.00015 5.1E-09 54.2 -1.8 38 27-64 28-70 (86)
223 3b7h_A Prophage LP1 protein 11 96.6 8.1E-05 2.8E-09 53.8 -3.6 43 27-69 21-69 (78)
224 2r1j_L Repressor protein C2; p 96.5 9.1E-05 3.1E-09 51.9 -3.3 42 27-68 19-65 (68)
225 1lmb_3 Protein (lambda repress 96.5 0.00013 4.5E-09 54.6 -2.7 42 28-69 32-78 (92)
226 2b5a_A C.BCLI; helix-turn-heli 96.5 0.0001 3.6E-09 53.0 -3.2 43 27-69 24-71 (77)
227 1adr_A P22 C2 repressor; trans 96.5 0.0001 3.4E-09 52.9 -3.4 43 27-69 19-66 (76)
228 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.5 0.0076 2.6E-07 49.8 7.5 74 107-180 38-118 (141)
229 3mlf_A Transcriptional regulat 96.5 0.00016 5.3E-09 57.1 -2.7 43 27-69 37-84 (111)
230 3f52_A CLP gene regulator (CLG 96.5 0.00012 4.1E-09 57.6 -3.4 43 27-69 42-89 (117)
231 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.4 0.015 5.2E-07 48.0 8.9 80 219-299 34-118 (141)
232 4ich_A Transcriptional regulat 96.4 0.00052 1.8E-08 62.5 0.0 43 27-69 44-91 (311)
233 3fym_A Putative uncharacterize 96.4 0.00011 3.9E-09 59.6 -4.0 43 28-70 18-71 (130)
234 3lfp_A CSP231I C protein; tran 96.4 0.00016 5.4E-09 55.2 -3.0 42 28-69 16-66 (98)
235 3ivp_A Putative transposon-rel 96.4 0.00011 3.8E-09 58.6 -4.1 42 28-69 27-73 (126)
236 2p17_A Pirin-like protein; GK1 96.3 0.033 1.1E-06 50.8 11.7 88 202-290 18-112 (277)
237 1j1l_A Pirin; beta sandwich, c 96.3 0.021 7.1E-07 52.6 10.3 88 203-290 19-114 (290)
238 2o38_A Hypothetical protein; a 96.3 0.00028 9.4E-09 56.7 -2.1 44 27-70 54-103 (120)
239 2a6c_A Helix-turn-helix motif; 96.3 0.00023 7.9E-09 52.7 -2.4 42 28-69 33-80 (83)
240 3bs3_A Putative DNA-binding pr 96.3 0.00023 7.8E-09 51.1 -2.4 43 27-69 24-71 (76)
241 3trb_A Virulence-associated pr 96.3 0.00019 6.4E-09 56.2 -3.3 43 27-69 28-75 (104)
242 2kpj_A SOS-response transcript 96.2 0.00017 6E-09 54.6 -3.5 43 27-69 23-70 (94)
243 1x57_A Endothelial differentia 96.2 0.00019 6.4E-09 53.9 -3.4 43 27-69 27-74 (91)
244 2wiu_B HTH-type transcriptiona 96.2 0.00023 7.9E-09 52.6 -3.0 43 27-69 26-73 (88)
245 3op9_A PLI0006 protein; struct 96.2 0.00015 5.1E-09 56.8 -4.3 42 28-69 24-70 (114)
246 1zug_A Phage 434 CRO protein; 96.0 0.00022 7.6E-09 50.3 -3.6 43 27-69 17-63 (71)
247 1r69_A Repressor protein CI; g 96.0 0.00025 8.5E-09 49.8 -3.4 43 27-69 15-61 (69)
248 3kxa_A NGO0477 protein, putati 96.0 0.00024 8.3E-09 58.5 -4.2 43 27-69 82-129 (141)
249 3ejk_A DTDP sugar isomerase; Y 96.0 0.05 1.7E-06 46.4 10.2 72 225-296 58-143 (174)
250 2l49_A C protein; P2 bacteriop 95.9 0.00052 1.8E-08 52.0 -2.2 42 28-69 19-67 (99)
251 2p5t_A Putative transcriptiona 95.9 0.0013 4.4E-08 54.7 0.0 43 27-69 15-62 (158)
252 3fmy_A HTH-type transcriptiona 95.9 0.00032 1.1E-08 50.9 -3.4 39 28-66 26-68 (73)
253 1b0n_A Protein (SINR protein); 95.7 0.00043 1.5E-08 53.4 -3.6 42 28-69 16-63 (111)
254 3cec_A Putative antidote prote 95.7 0.00043 1.5E-08 53.3 -3.7 43 27-69 32-79 (104)
255 3rcq_A Aspartyl/asparaginyl be 95.6 0.039 1.3E-06 48.0 8.3 76 221-298 103-184 (197)
256 2eby_A Putative HTH-type trans 95.5 0.00057 2E-08 53.3 -3.7 43 27-69 25-72 (113)
257 2ef8_A C.ECOT38IS, putative tr 95.4 0.00057 1.9E-08 49.9 -3.6 43 27-69 24-75 (84)
258 3pxp_A Helix-turn-helix domain 95.4 0.001 3.5E-08 61.5 -2.7 40 27-66 26-71 (292)
259 1nr3_A MTH0916, DNA-binding pr 95.4 0.001 3.5E-08 53.1 -2.4 38 28-65 7-55 (122)
260 1yll_A PA5104, conserved hypot 95.3 0.98 3.3E-05 39.2 16.1 163 72-277 7-177 (200)
261 2jvl_A TRMBF1; coactivator, he 95.3 0.0015 5.1E-08 50.9 -1.7 40 27-66 50-94 (107)
262 2qfc_A PLCR protein; TPR, HTH, 95.3 0.0024 8.1E-08 56.8 -0.6 42 27-69 19-65 (293)
263 2oyz_A UPF0345 protein VPA0057 95.3 0.071 2.4E-06 41.0 7.7 61 110-173 29-91 (94)
264 3u3w_A Transcriptional activat 95.3 0.0011 3.6E-08 59.1 -3.0 41 28-69 20-65 (293)
265 3bd1_A CRO protein; transcript 95.2 0.00052 1.8E-08 50.2 -4.4 42 28-69 13-60 (79)
266 2ict_A Antitoxin HIGA; helix-t 94.9 0.001 3.5E-08 50.0 -3.5 42 27-68 22-68 (94)
267 2awi_A PRGX; repressor, pherom 94.9 0.0015 5.3E-08 60.4 -3.2 42 27-69 17-63 (317)
268 2ppx_A AGR_C_3184P, uncharacte 94.8 0.00061 2.1E-08 52.1 -5.3 43 27-69 44-90 (99)
269 2l1p_A DNA-binding protein SAT 94.7 0.0013 4.3E-08 49.4 -3.4 28 28-55 34-61 (83)
270 3ejk_A DTDP sugar isomerase; Y 94.6 0.19 6.4E-06 42.8 9.3 74 109-182 58-148 (174)
271 3kmh_A D-lyxose isomerase; cup 94.5 0.32 1.1E-05 43.4 11.0 81 218-298 104-212 (246)
272 3hqx_A UPF0345 protein aciad03 94.4 0.23 7.9E-06 39.2 8.6 64 109-173 42-107 (111)
273 3esg_A HUTD, putative uncharac 94.2 0.59 2E-05 40.4 11.8 100 72-174 12-118 (193)
274 2qjv_A Uncharacterized IOLB-li 94.0 0.28 9.7E-06 44.6 9.8 82 208-292 16-108 (270)
275 1yud_A Hypothetical protein SO 94.0 0.48 1.6E-05 40.2 10.6 66 217-283 46-124 (170)
276 1e5r_A Proline oxidase; oxidor 94.0 0.059 2E-06 49.6 5.2 70 220-291 92-172 (290)
277 4gjz_A Lysine-specific demethy 93.7 0.15 5.2E-06 43.7 7.2 25 260-284 202-226 (235)
278 3eo6_A Protein of unknown func 93.6 0.19 6.4E-06 39.4 6.7 61 110-173 42-104 (106)
279 3bdn_A Lambda repressor; repre 93.6 0.0081 2.8E-07 52.4 -1.3 46 23-69 28-78 (236)
280 3rcq_A Aspartyl/asparaginyl be 93.6 0.27 9.2E-06 42.7 8.4 75 105-180 103-184 (197)
281 1pmi_A PMI, phosphomannose iso 93.4 0.23 7.9E-06 48.2 8.7 64 102-166 355-423 (440)
282 3of1_A CAMP-dependent protein 93.4 0.35 1.2E-05 41.1 9.0 151 108-269 32-196 (246)
283 3o9x_A Uncharacterized HTH-typ 93.0 0.004 1.4E-07 49.9 -3.9 39 28-66 86-128 (133)
284 1e5r_A Proline oxidase; oxidor 92.6 0.068 2.3E-06 49.2 3.4 74 103-177 90-175 (290)
285 2qdr_A Uncharacterized protein 92.1 1.1 3.7E-05 40.6 10.4 77 208-292 81-159 (303)
286 1qwr_A Mannose-6-phosphate iso 92.0 0.36 1.2E-05 44.7 7.5 60 102-164 249-309 (319)
287 2oyz_A UPF0345 protein VPA0057 92.0 0.52 1.8E-05 36.1 7.1 61 227-292 30-92 (94)
288 1dgw_X Canavalin; duplicated s 91.7 0.23 8E-06 36.7 4.8 38 218-256 34-72 (79)
289 3bb6_A Uncharacterized protein 91.7 0.59 2E-05 37.7 7.5 59 229-289 23-94 (127)
290 2fjr_A Repressor protein CI; g 91.7 0.0091 3.1E-07 50.4 -3.5 41 28-68 22-66 (189)
291 2wfp_A Mannose-6-phosphate iso 91.5 0.36 1.2E-05 46.1 7.2 61 102-165 322-383 (394)
292 1eyb_A Homogentisate 1,2-dioxy 91.4 1.4 4.7E-05 43.0 11.0 56 121-177 175-230 (471)
293 1dgw_Y Canavalin; duplicated s 91.3 0.35 1.2E-05 37.0 5.5 35 260-296 7-41 (93)
294 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 91.2 1.3 4.3E-05 38.0 9.6 63 228-291 56-133 (185)
295 1zx5_A Mannosephosphate isomer 90.9 0.88 3E-05 41.7 8.9 59 102-165 228-288 (300)
296 3eo6_A Protein of unknown func 90.5 0.8 2.8E-05 35.8 7.0 81 204-292 23-105 (106)
297 2ixk_A DTDP-4-dehydrorhamnose 90.0 1.7 5.8E-05 37.1 9.3 62 229-291 58-134 (184)
298 1dgw_X Canavalin; duplicated s 90.0 0.28 9.5E-06 36.3 3.7 38 102-139 34-72 (79)
299 1dw9_A Cyanate lyase; cyanate 89.7 0.036 1.2E-06 46.5 -1.4 41 28-68 28-73 (156)
300 4diq_A Lysine-specific demethy 89.6 0.79 2.7E-05 45.0 7.7 58 228-286 171-255 (489)
301 1wlt_A 176AA long hypothetical 89.5 2.1 7.2E-05 37.0 9.6 62 228-290 73-150 (196)
302 4gjz_A Lysine-specific demethy 89.1 1.1 3.7E-05 38.2 7.5 55 113-167 133-225 (235)
303 3ryk_A DTDP-4-dehydrorhamnose 89.1 1.5 5.1E-05 38.2 8.3 70 112-182 78-166 (205)
304 3bpz_A Potassium/sodium hyperp 89.1 0.86 2.9E-05 38.0 6.7 69 108-176 97-170 (202)
305 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 89.0 1 3.5E-05 38.5 7.2 69 112-181 56-142 (185)
306 1oi6_A PCZA361.16; epimerase, 88.9 2.5 8.7E-05 36.7 9.7 58 228-285 55-128 (205)
307 1vrb_A Putative asparaginyl hy 88.8 2.3 7.8E-05 39.6 10.0 30 259-288 218-247 (342)
308 1wlt_A 176AA long hypothetical 88.8 0.82 2.8E-05 39.5 6.4 59 122-181 87-160 (196)
309 3hqx_A UPF0345 protein aciad03 88.7 1.7 5.7E-05 34.2 7.5 82 204-291 24-107 (111)
310 1oi6_A PCZA361.16; epimerase, 88.0 2.1 7E-05 37.3 8.5 60 122-182 69-143 (205)
311 1yll_A PA5104, conserved hypot 87.9 0.7 2.4E-05 40.1 5.4 52 122-174 138-193 (200)
312 2ixk_A DTDP-4-dehydrorhamnose 87.9 1.4 4.7E-05 37.7 7.2 68 113-181 58-143 (184)
313 1dzr_A DTDP-4-dehydrorhamnose 87.9 3.1 0.00011 35.4 9.4 57 229-285 56-128 (183)
314 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 87.8 1.1 3.7E-05 38.8 6.5 69 112-181 68-149 (197)
315 3tnp_B CAMP-dependent protein 87.7 1.1 3.9E-05 42.3 7.3 153 107-269 169-348 (416)
316 1upi_A DTDP-4-dehydrorhamnose 87.7 3.6 0.00012 36.3 9.9 58 228-285 74-147 (225)
317 1upi_A DTDP-4-dehydrorhamnose 87.1 2.5 8.6E-05 37.3 8.6 59 122-181 88-161 (225)
318 2ypd_A Probable JMJC domain-co 86.3 0.34 1.2E-05 46.1 2.7 28 257-284 291-318 (392)
319 1vrb_A Putative asparaginyl hy 86.1 1.9 6.5E-05 40.1 7.8 66 110-175 146-252 (342)
320 3ryk_A DTDP-4-dehydrorhamnose 85.4 5.8 0.0002 34.4 9.9 66 224-290 74-155 (205)
321 2c0z_A NOVW; isomerase, epimer 85.2 2.8 9.6E-05 36.7 7.9 69 112-181 63-150 (216)
322 3d8c_A Hypoxia-inducible facto 85.2 1.7 5.9E-05 40.4 7.0 26 259-284 261-286 (349)
323 1dzr_A DTDP-4-dehydrorhamnose 85.0 2.4 8.3E-05 36.1 7.2 69 113-181 56-142 (183)
324 2c0z_A NOVW; isomerase, epimer 84.8 3.5 0.00012 36.1 8.3 58 228-285 63-136 (216)
325 1ywk_A 4-deoxy-L-threo-5-hexos 84.3 3.5 0.00012 37.7 8.3 66 224-290 61-130 (289)
326 3kmh_A D-lyxose isomerase; cup 84.0 5.5 0.00019 35.5 9.2 75 102-176 104-208 (246)
327 3dl3_A Tellurite resistance pr 83.5 2.9 0.0001 33.3 6.6 50 122-171 36-92 (119)
328 1rzs_A Antirepressor, regulato 83.3 0.1 3.4E-06 36.3 -1.9 36 28-65 12-51 (61)
329 3bb6_A Uncharacterized protein 83.3 5.2 0.00018 32.2 8.0 50 122-171 37-94 (127)
330 2d93_A RAP guanine nucleotide 82.8 1.2 4.2E-05 34.2 4.1 69 108-176 41-116 (134)
331 3ocp_A PRKG1 protein; serine/t 82.3 5.6 0.00019 30.4 7.9 68 108-176 48-121 (139)
332 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 82.3 6.6 0.00022 33.8 8.9 64 224-290 65-139 (197)
333 1yud_A Hypothetical protein SO 82.2 4.3 0.00015 34.2 7.6 64 103-166 48-122 (170)
334 4f8a_A Potassium voltage-gated 81.9 7.2 0.00025 30.3 8.6 67 109-176 53-127 (160)
335 3g7d_A PHPD; non heme Fe(II) d 81.9 1.6 5.6E-05 40.8 5.1 43 241-283 354-400 (443)
336 3pna_A CAMP-dependent protein 81.6 7.3 0.00025 30.5 8.5 68 108-176 63-136 (154)
337 2qcs_B CAMP-dependent protein 81.1 4.2 0.00014 35.4 7.5 150 108-269 64-233 (291)
338 2xdv_A MYC-induced nuclear ant 80.5 2.2 7.5E-05 41.3 5.8 25 259-283 199-223 (442)
339 2pij_A Prophage PFL 6 CRO; tra 80.0 0.084 2.9E-06 36.6 -3.3 27 28-54 15-41 (67)
340 1xru_A 4-deoxy-L-threo-5-hexos 80.0 2.8 9.5E-05 38.2 5.9 50 241-290 79-130 (282)
341 2xdv_A MYC-induced nuclear ant 79.5 4.1 0.00014 39.3 7.4 55 111-165 145-221 (442)
342 2fmy_A COOA, carbon monoxide o 78.5 11 0.00039 31.1 9.1 67 108-176 29-99 (220)
343 1uxc_A FRUR (1-57), fructose r 78.5 0.11 3.9E-06 36.8 -3.0 41 28-68 2-53 (65)
344 3ryp_A Catabolite gene activat 77.8 8.5 0.00029 31.4 8.0 70 108-177 21-101 (210)
345 3mdp_A Cyclic nucleotide-bindi 77.6 6.7 0.00023 29.7 6.9 69 108-176 31-112 (142)
346 1vp6_A CNBD, cyclic-nucleotide 77.5 2 6.8E-05 32.8 3.7 68 221-290 33-105 (138)
347 3al5_A HTYW5, JMJC domain-cont 77.0 3 0.0001 38.6 5.4 27 259-285 240-266 (338)
348 2d93_A RAP guanine nucleotide 77.0 2.3 7.8E-05 32.6 3.9 48 221-269 38-87 (134)
349 3dl3_A Tellurite resistance pr 76.8 9.3 0.00032 30.3 7.4 50 244-293 41-100 (119)
350 1ft9_A Carbon monoxide oxidati 76.5 11 0.00038 31.3 8.5 67 108-176 25-95 (222)
351 4diq_A Lysine-specific demethy 76.3 18 0.00061 35.4 10.8 71 108-178 167-264 (489)
352 4hn1_A Putative 3-epimerase in 76.1 15 0.0005 31.8 9.1 59 122-181 66-139 (201)
353 3al5_A HTYW5, JMJC domain-cont 75.5 12 0.0004 34.5 9.0 24 143-166 240-263 (338)
354 3d0s_A Transcriptional regulat 74.8 11 0.00039 31.2 8.1 69 108-176 31-109 (227)
355 4hn1_A Putative 3-epimerase in 74.7 17 0.00059 31.3 9.2 58 228-285 52-125 (201)
356 3pna_A CAMP-dependent protein 74.6 4.9 0.00017 31.5 5.5 48 221-269 60-108 (154)
357 1vp6_A CNBD, cyclic-nucleotide 74.5 3.2 0.00011 31.6 4.2 67 108-176 36-107 (138)
358 3shr_A CGMP-dependent protein 74.4 6 0.00021 34.7 6.5 151 108-269 64-233 (299)
359 3ukn_A Novel protein similar t 74.2 9.9 0.00034 31.5 7.6 68 108-176 100-175 (212)
360 3mdp_A Cyclic nucleotide-bindi 73.3 7.7 0.00026 29.4 6.2 49 221-270 28-85 (142)
361 2z69_A DNR protein; beta barre 73.1 9.4 0.00032 29.3 6.7 69 108-176 37-116 (154)
362 2ptm_A Hyperpolarization-activ 71.9 5.9 0.0002 32.5 5.5 69 108-176 96-170 (198)
363 3ryp_A Catabolite gene activat 70.9 8.2 0.00028 31.6 6.2 49 221-270 18-72 (210)
364 3bpz_A Potassium/sodium hyperp 70.7 4.2 0.00014 33.7 4.3 69 221-290 94-168 (202)
365 2pqq_A Putative transcriptiona 70.4 5.6 0.00019 30.4 4.7 48 221-269 27-80 (149)
366 3ocp_A PRKG1 protein; serine/t 70.3 7.4 0.00025 29.7 5.5 48 221-269 45-93 (139)
367 3b02_A Transcriptional regulat 70.2 8.4 0.00029 31.4 6.1 67 110-176 3-78 (195)
368 4ev0_A Transcription regulator 69.6 14 0.00048 30.3 7.4 69 108-176 24-102 (216)
369 1zyb_A Transcription regulator 69.4 12 0.00043 31.3 7.2 69 108-176 45-124 (232)
370 2l8n_A Transcriptional repress 69.3 0.45 1.5E-05 33.9 -1.8 42 26-67 9-58 (67)
371 3iwz_A CAP-like, catabolite ac 69.0 17 0.00057 30.1 7.8 69 108-176 36-115 (230)
372 2zcw_A TTHA1359, transcription 68.7 5.7 0.0002 32.6 4.7 68 222-290 5-84 (202)
373 2oz6_A Virulence factor regula 68.7 17 0.00059 29.4 7.8 70 108-177 15-98 (207)
374 2xxz_A Lysine-specific demethy 68.5 2.9 9.8E-05 39.0 3.0 24 261-284 281-304 (332)
375 2z69_A DNR protein; beta barre 68.4 10 0.00035 29.1 6.0 48 221-269 34-87 (154)
376 2ypd_A Probable JMJC domain-co 68.4 5.4 0.00019 37.9 4.9 25 143-167 293-317 (392)
377 1we3_O CPN10(groes); chaperoni 67.9 4.9 0.00017 31.0 3.8 49 243-294 42-92 (100)
378 3dv8_A Transcriptional regulat 67.9 14 0.00048 30.4 7.0 70 108-177 28-109 (220)
379 1o5l_A Transcriptional regulat 67.7 12 0.00042 30.9 6.7 69 108-176 24-103 (213)
380 3kcc_A Catabolite gene activat 67.6 15 0.00052 31.5 7.5 70 108-177 71-151 (260)
381 3k2o_A Bifunctional arginine d 67.6 3.9 0.00013 38.1 3.7 26 259-284 256-281 (336)
382 3fx3_A Cyclic nucleotide-bindi 67.5 21 0.00072 29.7 8.2 70 108-177 36-115 (237)
383 2auw_A Hypothetical protein NE 67.5 0.44 1.5E-05 40.4 -2.5 28 27-54 104-131 (170)
384 2pqq_A Putative transcriptiona 67.2 9.9 0.00034 28.9 5.6 69 108-176 30-108 (149)
385 3dv8_A Transcriptional regulat 66.8 10 0.00036 31.1 6.0 47 222-269 26-78 (220)
386 2h8r_A Hepatocyte nuclear fact 66.5 0.48 1.7E-05 41.8 -2.5 28 27-54 45-72 (221)
387 4din_B CAMP-dependent protein 66.2 6.2 0.00021 36.6 4.9 152 107-269 154-324 (381)
388 1ft9_A Carbon monoxide oxidati 65.8 24 0.00083 29.1 8.2 64 221-287 22-90 (222)
389 3idb_B CAMP-dependent protein 65.6 34 0.0012 26.6 8.7 69 108-176 63-140 (161)
390 3e97_A Transcriptional regulat 64.7 25 0.00085 29.1 8.1 69 108-176 31-109 (231)
391 3nx6_A 10KDA chaperonin; bacte 64.7 6.5 0.00022 30.0 3.8 49 243-294 37-87 (95)
392 4f8a_A Potassium voltage-gated 64.1 12 0.00042 28.9 5.6 50 221-271 49-99 (160)
393 3ukn_A Novel protein similar t 63.5 9.8 0.00033 31.5 5.2 51 220-271 96-147 (212)
394 2ptm_A Hyperpolarization-activ 63.0 9.8 0.00033 31.1 5.1 68 221-289 93-167 (198)
395 2yu1_A JMJC domain-containing 62.6 5.7 0.0002 38.5 4.0 29 257-285 264-292 (451)
396 2oz6_A Virulence factor regula 61.6 17 0.00059 29.4 6.4 48 222-270 13-66 (207)
397 3of1_A CAMP-dependent protein 61.5 16 0.00053 30.5 6.2 68 108-176 150-224 (246)
398 3d0s_A Transcriptional regulat 61.4 15 0.00052 30.4 6.1 68 221-289 28-106 (227)
399 3e6c_C CPRK, cyclic nucleotide 60.9 24 0.00081 29.8 7.4 69 108-176 34-109 (250)
400 1wgp_A Probable cyclic nucleot 60.4 3.8 0.00013 31.2 1.9 55 122-176 45-119 (137)
401 3dn7_A Cyclic nucleotide bindi 60.1 13 0.00044 30.0 5.3 67 222-289 30-108 (194)
402 1o5l_A Transcriptional regulat 59.9 14 0.00049 30.5 5.7 69 219-288 19-99 (213)
403 3d8c_A Hypoxia-inducible facto 59.5 6.5 0.00022 36.5 3.7 23 144-166 262-284 (349)
404 3idb_B CAMP-dependent protein 59.2 16 0.00056 28.5 5.6 48 221-269 60-112 (161)
405 4ask_A Lysine-specific demethy 58.8 5.4 0.00018 39.2 3.0 24 261-284 315-338 (510)
406 4ava_A Lysine acetyltransferas 58.3 18 0.00061 32.1 6.3 70 108-177 38-116 (333)
407 2qcs_B CAMP-dependent protein 58.1 15 0.0005 31.8 5.6 48 221-269 61-109 (291)
408 4ev0_A Transcription regulator 58.0 12 0.00043 30.5 4.9 66 222-288 22-98 (216)
409 3k3o_A PHF8, PHD finger protei 56.9 6.8 0.00023 37.0 3.3 28 257-284 215-242 (371)
410 3pua_A GRC5, PHD finger protei 56.8 6.8 0.00023 37.3 3.3 28 257-284 242-269 (392)
411 3avr_A Lysine-specific demethy 56.7 6 0.00021 39.1 3.0 24 261-284 340-363 (531)
412 2fmy_A COOA, carbon monoxide o 56.6 32 0.0011 28.3 7.3 64 221-287 26-94 (220)
413 2zcw_A TTHA1359, transcription 56.5 17 0.0006 29.5 5.5 66 109-174 8-84 (202)
414 2gau_A Transcriptional regulat 56.4 8.4 0.00029 32.2 3.6 68 221-289 32-110 (232)
415 3dn7_A Cyclic nucleotide bindi 55.9 25 0.00085 28.2 6.3 69 108-176 32-111 (194)
416 3iwz_A CAP-like, catabolite ac 55.8 17 0.0006 30.0 5.5 49 221-270 33-87 (230)
417 1o7f_A CAMP-dependent RAP1 gua 55.8 20 0.00068 33.5 6.4 68 108-176 363-438 (469)
418 3k2o_A Bifunctional arginine d 55.4 15 0.00051 34.0 5.3 25 144-168 257-281 (336)
419 2bgc_A PRFA; bacterial infecti 55.3 52 0.0018 27.4 8.6 67 109-176 21-100 (238)
420 3kv4_A PHD finger protein 8; e 55.1 9.7 0.00033 36.8 4.1 28 257-284 299-326 (447)
421 1zyb_A Transcription regulator 53.9 22 0.00076 29.7 5.9 68 222-290 43-122 (232)
422 3shr_A CGMP-dependent protein 53.7 22 0.00074 31.0 6.0 69 108-176 182-261 (299)
423 3b02_A Transcriptional regulat 53.3 15 0.0005 29.9 4.5 45 225-270 2-52 (195)
424 3fx3_A Cyclic nucleotide-bindi 52.7 18 0.00062 30.1 5.1 47 222-269 34-86 (237)
425 3gyd_A CNMP-BD protein, cyclic 52.2 17 0.00058 29.6 4.7 48 221-269 61-114 (187)
426 3kv5_D JMJC domain-containing 51.7 9 0.00031 37.5 3.3 28 257-284 334-361 (488)
427 1pcq_O Groes protein; chaperon 51.3 31 0.0011 26.2 5.7 49 243-294 37-88 (97)
428 3kcc_A Catabolite gene activat 50.4 29 0.00099 29.7 6.2 69 221-290 68-148 (260)
429 3la7_A Global nitrogen regulat 49.3 64 0.0022 27.0 8.2 70 108-177 45-126 (243)
430 2gau_A Transcriptional regulat 48.9 20 0.00067 29.8 4.7 69 108-176 35-113 (232)
431 3kv9_A JMJC domain-containing 48.8 11 0.00038 35.9 3.3 28 257-284 243-270 (397)
432 3gyd_A CNMP-BD protein, cyclic 48.3 24 0.00083 28.6 5.1 69 108-176 64-142 (187)
433 1o7f_A CAMP-dependent RAP1 gua 48.3 41 0.0014 31.3 7.3 70 108-177 67-147 (469)
434 1p3h_A 10 kDa chaperonin; beta 48.2 47 0.0016 25.3 6.3 49 243-294 39-90 (99)
435 3e97_A Transcriptional regulat 46.9 47 0.0016 27.3 6.8 49 221-270 28-82 (231)
436 1ic8_A Hepatocyte nuclear fact 46.3 1.3 4.5E-05 38.2 -3.2 28 27-54 44-71 (194)
437 3e6c_C CPRK, cyclic nucleotide 46.2 54 0.0018 27.5 7.2 64 221-285 31-102 (250)
438 3la7_A Global nitrogen regulat 45.3 28 0.00096 29.3 5.2 47 222-269 43-95 (243)
439 3dkw_A DNR protein; CRP-FNR, H 44.4 14 0.00048 30.5 3.0 69 221-290 31-111 (227)
440 3v2d_V 50S ribosomal protein L 44.2 21 0.00073 27.4 3.7 22 252-273 3-24 (101)
441 4f7z_A RAP guanine nucleotide 44.0 28 0.00096 36.4 5.9 69 107-176 66-146 (999)
442 1eyb_A Homogentisate 1,2-dioxy 42.9 70 0.0024 31.0 7.9 69 219-291 156-226 (471)
443 3dkw_A DNR protein; CRP-FNR, H 41.2 20 0.00067 29.6 3.5 70 108-177 34-114 (227)
444 3k3o_A PHF8, PHD finger protei 40.7 24 0.00081 33.3 4.2 34 143-178 217-250 (371)
445 3kv4_A PHD finger protein 8; e 40.3 31 0.0011 33.3 5.1 66 112-179 239-335 (447)
446 2hin_A GP39, repressor protein 39.8 1.2 4.1E-05 32.1 -3.8 30 26-55 10-39 (71)
447 3pua_A GRC5, PHD finger protei 39.3 28 0.00097 33.0 4.6 67 112-180 182-279 (392)
448 3r8s_R 50S ribosomal protein L 39.1 20 0.00069 27.6 2.9 22 252-273 3-24 (103)
449 2yu1_A JMJC domain-containing 38.2 34 0.0012 33.0 5.0 36 142-179 265-300 (451)
450 4f7z_A RAP guanine nucleotide 38.1 36 0.0012 35.6 5.6 55 121-176 376-438 (999)
451 3plx_B Aspartate 1-decarboxyla 37.9 2.7 9.3E-05 32.5 -2.2 31 245-275 33-66 (102)
452 3kv5_D JMJC domain-containing 37.5 27 0.00092 34.1 4.2 57 112-168 274-361 (488)
453 3pur_A Lysine-specific demethy 37.0 18 0.00061 35.8 2.8 25 260-284 367-391 (528)
454 4ava_A Lysine acetyltransferas 36.6 32 0.0011 30.4 4.3 48 221-269 35-87 (333)
455 3esg_A HUTD, putative uncharac 36.2 2E+02 0.0068 24.4 9.3 97 193-291 16-120 (193)
456 1uhe_A Aspartate 1-decarboxyla 35.4 3.2 0.00011 31.8 -2.2 32 244-275 31-65 (97)
457 3tnp_B CAMP-dependent protein 33.8 48 0.0016 30.9 5.2 69 108-176 292-376 (416)
458 2bgc_A PRFA; bacterial infecti 33.7 85 0.0029 26.0 6.4 67 222-291 18-97 (238)
459 3kv9_A JMJC domain-containing 33.5 36 0.0012 32.4 4.2 34 143-178 245-278 (397)
460 1zx4_A P1 PARB, plasmid partit 33.3 3.1 0.00011 35.8 -2.9 34 27-60 25-79 (192)
461 4din_B CAMP-dependent protein 32.5 49 0.0017 30.3 5.0 68 109-176 274-352 (381)
462 3cf6_E RAP guanine nucleotide 32.2 65 0.0022 32.5 6.2 68 108-176 58-133 (694)
463 1dgw_Y Canavalin; duplicated s 31.3 1E+02 0.0034 23.1 5.6 30 145-174 8-37 (93)
464 3pur_A Lysine-specific demethy 30.3 42 0.0014 33.1 4.2 37 144-182 367-403 (528)
465 2cw1_A SN4M; lambda CRO fold, 28.8 3.2 0.00011 29.3 -3.0 27 28-54 15-41 (65)
466 2y75_A HTH-type transcriptiona 28.4 4.9 0.00017 31.3 -2.4 26 23-48 23-48 (129)
467 1vc3_B L-aspartate-alpha-decar 27.8 5 0.00017 30.7 -2.3 31 245-275 33-67 (96)
468 1pqh_A Aspartate 1-decarboxyla 27.6 8.7 0.0003 31.4 -1.0 45 221-275 60-108 (143)
469 1s4c_A Protein HI0227; double- 26.0 1.1E+02 0.0037 24.6 5.4 35 259-293 112-149 (155)
470 2rg4_A Uncharacterized protein 25.3 1.1E+02 0.0036 26.1 5.5 21 145-165 171-191 (216)
471 2c45_A Aspartate 1-decarboxyla 25.2 8.4 0.00029 31.3 -1.5 46 221-276 43-92 (139)
472 3oug_A Aspartate 1-decarboxyla 23.9 10 0.00035 29.8 -1.2 50 216-275 41-94 (114)
473 1jhg_A Trp operon repressor; c 23.4 4.2 0.00014 31.4 -3.5 26 24-49 56-81 (101)
474 2rg4_A Uncharacterized protein 22.9 1.4E+02 0.0049 25.2 5.9 62 221-283 104-193 (216)
475 2lnu_A Uncharacterized protein 21.8 98 0.0034 26.3 4.5 27 122-149 71-97 (190)
476 3beh_A MLL3241 protein; transm 21.6 20 0.00067 32.6 0.0 48 220-269 249-296 (355)
477 3k69_A Putative transcription 20.8 12 0.00042 30.7 -1.4 27 23-49 25-51 (162)
478 3beh_A MLL3241 protein; transm 20.8 21 0.00071 32.4 0.0 44 108-153 253-296 (355)
479 1gpp_A Endonuclease PI-SCEI; h 20.6 1.1E+02 0.0038 26.9 4.6 49 245-293 10-63 (237)
480 1z85_A Hypothetical protein TM 20.2 20 0.00069 31.4 -0.2 46 236-281 8-59 (234)
481 3cf6_E RAP guanine nucleotide 20.1 97 0.0033 31.3 4.8 45 224-269 58-104 (694)
No 1
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=100.00 E-value=4.2e-81 Score=575.51 Aligned_cols=262 Identities=82% Similarity=1.352 Sum_probs=253.4
Q ss_pred CCCcceeeecCCCCChhhhhcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcC
Q 022278 38 SSKPMYWKVTNPTLSPSHLQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARS 117 (300)
Q Consensus 38 lsk~~~Sqver~~~sps~I~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~ 117 (300)
.|++.+|++.|++.|||+++++||.|||+|+++||||++++++.+.+|+|++++.++|++|..|++|++++++++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~~avI~~~~iv~s~lPg~~~~~~~vL~sP~~G~~f~~~lv~l~PGg~s 83 (266)
T 4e2q_A 4 KTNPIYWKATNPTLSPSHLQDLPGFTRSVYKRDHALITPESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSS 83 (266)
T ss_dssp ---CTTGGGTSCSSCGGGGTTSTTCCCCEECSSEEEECGGGCCCEECTTSSSEEEEEEECGGGTCSSEEEEEEECSSEEC
T ss_pred ccCccchhccCcccChhhhhcccCcccEEEEcCeEEECccceEEeeCCCCcCEEEEEEcCCCCCCcEEEEEEEECcCCcC
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCceEEEEEEECEEEEEEcC-CcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccCCCCcceeeccCCCC
Q 022278 118 ALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENHITEQIVGSTDKQ 196 (300)
Q Consensus 118 ~~~~h~gEEf~yVLeG~v~l~v~g-g~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~ 196 (300)
+.+.|++|||+|||+|++++++ + |++++|++||++|||++.+|+++|+++|+++||.++|+|++|.+|+++++|++|+
T Consensus 84 ~~~~h~~EEfiyVleG~l~l~l-~~g~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V~k~y~~~~g~~p~~~v~~~~dv 162 (266)
T 4e2q_A 84 GLPPQDIERLIFVVEGAVTLTN-TSSSSKKLTVDSYAYLPPNFHHSLDCVESATLVVFERRYEYLGSHTTELIVGSTDKQ 162 (266)
T ss_dssp CCCCTTEEEEEEEEEECEEEEC---CCCEEECTTEEEEECTTCCCEEEESSCEEEEEEEEECCCCTTCCCCCEEEEGGGS
T ss_pred CCCCCCCeEEEEEEEEEEEEEE-CCCcEEEEcCCCEEEECCCCCEEEEeCCCEEEEEEEeEeeeCCCCCCceeeCcHhHC
Confidence 7788999999999999999999 8 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCc
Q 022278 197 PLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 197 ~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~ 276 (300)
|+++++|+++++|+|+|++++++|+||+|||+||+++|+||||+|||++|||+|+|+|++||+|++|++||+|||+|||+
T Consensus 163 ~~~~~~g~~~~~r~l~p~~~~~d~~~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~l~~~~~~V~~GD~i~~~~~~~ 242 (266)
T 4e2q_A 163 PLLETPGEVFELRKLLPMSVAYDFNIHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVP 242 (266)
T ss_dssp CCBCCTTCCSEEEESSCCSTTCSEEEEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCC
T ss_pred CCcccCCCcEEEEEccCcccccceEEEEEEECCCcCcCCceEcccceEEEEEeceEEEEECCEEEEecCCCEEEECCCCc
Confidence 99999987778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCccEEEEEEeecCCCCC
Q 022278 277 QWYAALGKTRTRYLLYKDVNRNPL 300 (300)
Q Consensus 277 H~~~n~G~e~~~fi~~kd~nr~~~ 300 (300)
|||+|+|++|++||+|||||||||
T Consensus 243 h~~~n~G~e~~~yl~ykd~nr~~~ 266 (266)
T 4e2q_A 243 QWYAALGKTRSRYLLYKDVNRNPL 266 (266)
T ss_dssp EEEEEESSSCEEEEEEEECSSCCC
T ss_pred EEEEeCCCCCEEEEEEccccCCCC
Confidence 999999999999999999999997
No 2
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=100.00 E-value=4.6e-60 Score=431.03 Aligned_cols=241 Identities=40% Similarity=0.736 Sum_probs=229.3
Q ss_pred hcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEEecC--CCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECE
Q 022278 57 QDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITP--AMGSHFVMYLANMQENARSALPPHDVERFIFVVQGS 134 (300)
Q Consensus 57 ~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L~sp--~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~ 134 (300)
+++|+++|+.+..+++++++++.+...+|.|.++..++|++| ..+++|++++++++||+.+..+. +|||+|||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~Pg~~~~~~~--~ee~~~Vl~G~ 78 (246)
T 1sfn_A 1 MKHLGQTRSALHGSHAVITPETFVRTALAEWPGSAIVLHIAPVVGLGARFVQFTAEMPAGAQATESV--YQRFAFVLSGE 78 (246)
T ss_dssp CGGGTCCSCEEETTEEEECGGGCCCBCCTTSTTCEEEEEECTTSTTCCSSEEEEEEECTTCEEECCS--SEEEEEEEEEE
T ss_pred CCcccCccEEeecCeEEECchhcEEecCCCccCCEEEEEecCCCCCCCcEEEEEEEECCCCcCCCCc--eeEEEEEEECE
Confidence 368999999999999999999999888999999999999999 77889999999999998876554 99999999999
Q ss_pred EEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccCCC-CcceeeccCCCCCCcccCC-ceeEEEEee
Q 022278 135 AMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENH-ITEQIVGSTDKQPLLETPG-EVFQLRKLL 212 (300)
Q Consensus 135 v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~g~-~p~~~~~~~~d~~~~~~~g-~~~~~~~l~ 212 (300)
+++++ +|+++.|++||++|||++.+|+++|.++++++|+.++|+|++|. +|.++++|++|++..+++| .++.+|+|+
T Consensus 79 ~~~~~-~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l~v~~~y~~~~g~~~p~~~vg~~~dv~~~~~~~~~g~~~r~l~ 157 (246)
T 1sfn_A 79 VDVAV-GGETRTLREYDYVYLPAGEKHMLTAKTDARVSVFEKPYQTVEGVQAPGVYWGNERENPGYPFEGDDHLIARKLL 157 (246)
T ss_dssp EEEEC-SSCEEEECTTEEEEECTTCCCEEEEEEEEEEEEEEECCCCBTTBCCCCCEEEETTTCCCEETTSCTTEEEEECS
T ss_pred EEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCEEEEEEEeeeccCCCCcCCceeeccHhhCCccccCCCCCeEEEEeC
Confidence 99999 99999999999999999999999998899999999999999996 8999999999999999987 568888999
Q ss_pred CCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 213 PQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 213 p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
|++.++++.|++++|+||++++++++|.+||.+|||+|+++|++||+|++|++||++|++++++|+|+|+|+++++||+|
T Consensus 158 p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~ 237 (246)
T 1sfn_A 158 PDEPAFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKLEENYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLY 237 (246)
T ss_dssp CCCTTCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEESSSCEEEEEE
T ss_pred CCccCCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEECCEEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEE
Confidence 98778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCC
Q 022278 293 KDVNRNPL 300 (300)
Q Consensus 293 kd~nr~~~ 300 (300)
|||||||+
T Consensus 238 kd~~r~~~ 245 (246)
T 1sfn_A 238 KDMNRHPL 245 (246)
T ss_dssp EECSSCCC
T ss_pred EecccCCC
Confidence 99999996
No 3
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=100.00 E-value=3.2e-58 Score=426.40 Aligned_cols=241 Identities=29% Similarity=0.518 Sum_probs=225.1
Q ss_pred cccCCcceeeeeeeeEeCC---CCeeeccCCCCCcceEEEEecC--CCCCcEEEEEEEEcCCCcC--CCCCCCceEEEEE
Q 022278 58 DLPGFTRSVYKRDHALITP---ESHVLSPLPEWTNTLGAYLITP--AMGSHFVMYLANMQENARS--ALPPHDVERFIFV 130 (300)
Q Consensus 58 ~~lg~trs~f~~~~av~~~---e~~~~~~~p~~~~~~~~~L~sp--~~g~~f~~~lv~l~PG~~~--~~~~h~gEEf~yV 130 (300)
++|+. |+.+..+++++++ ++.+...+|+|.++..++|++| ..++.|++++++++||+.. +.+.|++||++||
T Consensus 18 ~~~~~-~~~~~~~~avi~~~~~~~iv~~~lp~~~~~~~~~L~~p~~~~~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~V 96 (278)
T 1sq4_A 18 ELLTD-RAMFTEAYAVIPKGVMRDIVTSHLPFWDNMRMWVIARPLSGFAETFSQYIVELAPNGGSDKPEQDPNAEAVLFV 96 (278)
T ss_dssp -CCCC-CCEECSSEEEECGGGCCGGGCBCCTTCEEEEEEEECCCSSSSCCSCEEEEEEEEEEEEESSCCCCTTEEEEEEE
T ss_pred ccccc-ceEeccceEEECCCCcccceeccCCCccCcEEEEEecCCCCCCCcEEEEEEEECCCCccCCCCcCCCceEEEEE
Confidence 35555 9999999999999 9999999999999999999999 4578999999999999877 3356899999999
Q ss_pred EECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeeccccCCC-CcceeeccCCCCCCcccCC-cee
Q 022278 131 VQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENH-ITEQIVGSTDKQPLLETPG-EVF 206 (300)
Q Consensus 131 LeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y~~~~g~-~p~~~~~~~~d~~~~~~~g-~~~ 206 (300)
|+|++++++ +|+++.|++||++|||++.+|+++| +++++++|+.++|.+.+|. .|.++++|++|+++.+++| .++
T Consensus 97 l~G~l~v~v-~g~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~~y~~~~g~~~p~~~vgn~~di~~~~~~~~~~~ 175 (278)
T 1sq4_A 97 VEGELSLTL-QGQVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRKHYQKVDGVPLPEAFVTNEQDIQPLVMPDTEGR 175 (278)
T ss_dssp EESCEEEEE-SSCEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEEECCCCTTCCCCCCEEEEGGGSCCEECSSGGGC
T ss_pred EeCEEEEEE-CCEEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEeccccCCCCcCCcccccchhhcCcccCCCCCCc
Confidence 999999999 9999999999999999999999999 5789999999999999996 7999999999999999987 455
Q ss_pred --EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 207 --QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 207 --~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
+.|+|+|++.++++.|++++|+||+++|++|+|.+||.+|||+|+|+|++||+|++|++||++||++|++|+|+|+|+
T Consensus 176 ~~~~r~l~p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 176 WSTTRFVDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEECSSCTTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred eeEEEEecCCCcCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 777889988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEEEeecCCCCC
Q 022278 285 TRTRYLLYKDVNRNPL 300 (300)
Q Consensus 285 e~~~fi~~kd~nr~~~ 300 (300)
++++||+||||||||+
T Consensus 256 ~~~~yl~~~d~nr~~~ 271 (278)
T 1sq4_A 256 GRFRYLLYKDVNRHMR 271 (278)
T ss_dssp SCEEEEEEEECSSCCC
T ss_pred CCEEEEEEEEcCCCcc
Confidence 9999999999999985
No 4
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=100.00 E-value=1.5e-52 Score=383.78 Aligned_cols=248 Identities=28% Similarity=0.516 Sum_probs=221.8
Q ss_pred ChhhhhcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCC--CCCceEEEE
Q 022278 52 SPSHLQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALP--PHDVERFIF 129 (300)
Q Consensus 52 sps~I~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~--~h~gEEf~y 129 (300)
+++...+.|+++|+.|..+++++++++.+...+|.|.++..++|++|..++.|++++++++||+.+..+ .+++|||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~ 86 (261)
T 1rc6_A 7 VTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLY 86 (261)
T ss_dssp --CBHHHHTCCCCEECTTSEEEECGGGSCCBCCTTEEEEEEEECCCGGGTCSSEEEEEEEEEEEEESSCSCCTTEEEEEE
T ss_pred CcCccccccccceEEeECCEEEEChhhcEEeeccCCCCcEEEEEeCCCCCCcEEEEEEEEcCCCccCCCCCCCCceEEEE
Confidence 566688999999999999999999999988889999999999999998889999999999999887654 346899999
Q ss_pred EEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeeccccCCCCcceeeccCCCCCCcccCC-cee
Q 022278 130 VVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPG-EVF 206 (300)
Q Consensus 130 VLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~g-~~~ 206 (300)
||+|++++++ +|+++.|++||++|||++.+|+++| +++++++|+.++|+|.+|..|.+++.+.+++++...+| +++
T Consensus 87 Vl~G~l~~~~-~~~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~~~~~~~~g~~p~~~v~~~~~~~~~~~~~~~~~ 165 (261)
T 1rc6_A 87 VISGNITAKA-EGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDV 165 (261)
T ss_dssp EEESEEEEEE-TTEEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCC-------C
T ss_pred EEEeEEEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeccccCCCCCCceEEcCHHHCCcccCCCCcce
Confidence 9999999999 9999999999999999999999999 58999999999999999988999999999999998876 667
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC-c
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-T 285 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e 285 (300)
..+.|++.+.+..+.+.+++++||+.++.|.||..+|.+|||+|++.+++||+++++++||++|++++++|++.|.|+ +
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~~~ 245 (261)
T 1rc6_A 166 ILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGE 245 (261)
T ss_dssp EEEECSCCSTTCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESSSCEEEEETTCEEEECSSEEEEEEEC----
T ss_pred EEEEecCcccCCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCCCc
Confidence 788888877677888999999999999987777788999999999999999999999999999999999999999999 9
Q ss_pred cEEEEEEeecCCCCC
Q 022278 286 RTRYLLYKDVNRNPL 300 (300)
Q Consensus 286 ~~~fi~~kd~nr~~~ 300 (300)
+++||+||||||||+
T Consensus 246 ~~~~l~~~d~~r~~~ 260 (261)
T 1rc6_A 246 AFSYIYSKDCNRDVE 260 (261)
T ss_dssp CEEEEEEEECSCCCC
T ss_pred CEEEEEEecCCCCCC
Confidence 999999999999985
No 5
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=100.00 E-value=9.3e-50 Score=368.02 Aligned_cols=244 Identities=30% Similarity=0.574 Sum_probs=225.3
Q ss_pred hhcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCC--CCCceEEEEEEEC
Q 022278 56 LQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALP--PHDVERFIFVVQG 133 (300)
Q Consensus 56 I~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~--~h~gEEf~yVLeG 133 (300)
-.++|+++|+.|..+++++++++++...+|.|.++..++|++|..++.|++++++++||+.+..+ .+++|||+|||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~vi~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G 93 (274)
T 1sef_A 14 QKELLTSRAVIKKDNYAIIPHDGLVQNAVPGFENVDISILGSPKLGATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDG 93 (274)
T ss_dssp -CCCCCCCCEEETTTEEEECGGGCCCCCCTTEEEEEEEECSCGGGTCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEES
T ss_pred CcccccccceEeEcCEEEEChhhcccccCCCCCCeEEEEEcCCCCCCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEe
Confidence 45789999999999999999999998889999999999999998889999999999999887654 3468999999999
Q ss_pred EEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeeccccCCCCcceeeccCCCCCCcccCC-ceeEEEE
Q 022278 134 SAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPG-EVFQLRK 210 (300)
Q Consensus 134 ~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~g-~~~~~~~ 210 (300)
++++++ +|+++.|++||++|||++.+|+++| +++|+++|+.++|+|.+|..|.+++.+++|+++.++++ +++..++
T Consensus 94 ~l~~~~-~~~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~~y~~~~g~~p~~~v~~~~d~~~~~~~~~~g~~~~~ 172 (274)
T 1sef_A 94 RLRVSD-GQETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYKKRYQPLAGHQPYKVVGSIHDQQPEEYEGMTDVLLWS 172 (274)
T ss_dssp EEEEEC-SSCEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEEECCCCTTCCCCCEEEEGGGSCCEEGGGCTTEEEEE
T ss_pred EEEEEE-CCEEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEeeeeeCCCCCCcceeCChHHCCccccCCCCCeEEEE
Confidence 999999 9999999999999999999999999 68999999999999999999999999999999998764 5567888
Q ss_pred eeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC-ccEEE
Q 022278 211 LLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-TRTRY 289 (300)
Q Consensus 211 l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e~~~f 289 (300)
|++.+.+.++.+.+++++||+.++..|.|.++|.+|||+|++.+++||+++++++||+++++++++|++.|.|+ ++++|
T Consensus 173 l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~ 252 (274)
T 1sef_A 173 LLPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGREEPLMY 252 (274)
T ss_dssp CSCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEETTEEEEEETTCEEEECTTCCEEEEEECSSSCEEE
T ss_pred eCCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEeCCCCCCEEE
Confidence 88877677899999999999999874678899999999999999999999999999999999999999999999 99999
Q ss_pred EEEeecCCCCC
Q 022278 290 LLYKDVNRNPL 300 (300)
Q Consensus 290 i~~kd~nr~~~ 300 (300)
|+|||+|||++
T Consensus 253 l~~~~~~r~~~ 263 (274)
T 1sef_A 253 VYSKDANREPE 263 (274)
T ss_dssp EEEEECSSCCC
T ss_pred EEEEcCCCCcc
Confidence 99999999974
No 6
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.96 E-value=1.3e-28 Score=220.90 Aligned_cols=182 Identities=14% Similarity=0.198 Sum_probs=146.2
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeecc-
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYA- 179 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~- 179 (300)
+..+.+.++.+.||+..+.|.|++|+++|||+|++++++ +|+++.|++||++|+|++.+|.++|.++++++++..++.
T Consensus 34 ~~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i-~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~~~~~~ 112 (227)
T 3rns_A 34 QPNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI-ENNKKTISNGDFLEITANHNYSIEARDNLKLIEIGEKIGD 112 (227)
T ss_dssp CSSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE-SSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEEECC--
T ss_pred CCCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEEeeccc
Confidence 346788899999999888889999999999999999999 999999999999999999999999988999999977764
Q ss_pred -c-----cCCCCcceeeccCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEE
Q 022278 180 -S-----LENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGI 253 (300)
Q Consensus 180 -~-----~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~ 253 (300)
. .++..+ ..+-+..|. .++..+++..+.|...+ .+.+.+++|+||..++. |+|..++.+|||+|++.
T Consensus 113 ~~~~~~~~~~l~~-~~~~~~~d~--~~~~~g~~~~~~l~~~~---~~~~~~~~~~~G~~~~~-H~H~~~e~~~Vl~G~~~ 185 (227)
T 3rns_A 113 GNMENKTLKMLES-ASAFNLAEV--VEYQEGKIVSKNLVAKP---NLVMTIMSFWKGESLDP-HKAPGDALVTVLDGEGK 185 (227)
T ss_dssp ---------------CCEESGGG--SCCCTTCEEEEEEEEET---TEEEEEEEECTTCEEEE-ECCSSEEEEEEEEEEEE
T ss_pred chhhhhHhhcCCc-cccCcHHHc--cccCCCCEEEEEEEECC---CeEEEEEEECCCCccCC-EECCCcEEEEEEeEEEE
Confidence 2 222222 223334332 12333455566666432 47888999999999996 78889999999999999
Q ss_pred EEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 254 YRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 254 ~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
+++||+++.+++||.+|+|++++|++.|. .+++++++
T Consensus 186 ~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 186 YYVDGKPFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp EEETTEEEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 99999999999999999999999999994 56677665
No 7
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.95 E-value=3.2e-27 Score=213.72 Aligned_cols=190 Identities=14% Similarity=0.137 Sum_probs=144.9
Q ss_pred cceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEE-eCCCCceEEee--
Q 022278 89 NTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTY-LPPNFAHSLRA-- 165 (300)
Q Consensus 89 ~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~y-fpa~~~H~~~N-- 165 (300)
+.....+... ...+.+++++||+..+.|.|+++|++||++|++++++ +|+++.|++||++| +|++.+|+++|
T Consensus 23 Gv~~~~l~~~----~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~-~~~~~~l~~Gd~i~~ip~~~~H~~~n~~ 97 (243)
T 3h7j_A 23 GVRQYSTVRG----DTEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV-GDVTRKMTALESAYIAPPHVPHGARNDT 97 (243)
T ss_dssp SCEEEEEEET----TEEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE-TTEEEEEETTTCEEEECTTCCEEEEECS
T ss_pred CeEEEEEECC----CCEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE-CCEEEEECCCCEEEEcCCCCcEeeEeCC
Confidence 3555555433 2345567799998888888999999999999999999 99999999999998 99999999999
Q ss_pred CCeEEEEEEEeeccccCCC-Ccceee-ccCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecC-CcccCcceeeccc
Q 022278 166 EGSATLVVFERRYASLENH-ITEQIV-GSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQP-GDFLNVKEVHYNQ 242 (300)
Q Consensus 166 ~~~a~vl~v~~~y~~~~g~-~p~~~~-~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~P-G~~~p~~~~H~~e 242 (300)
+++++++++. ++...++. .|..+. .....-. ...+ .....+ .+..+.+.+++|+| |+.++. |.|.++
T Consensus 98 ~~~~~~l~i~-r~~~~e~~~~p~g~~~~~L~~~~--~~~~--~~~~~~----~~~~~~~~~~~~~p~g~~~~~-H~H~~~ 167 (243)
T 3h7j_A 98 DQEVIAIDIK-RLKADETYTSPEDYFLDIFKTRD--LLPG--MEVTFF----VEDWVEIMLAKIPGNGGEMPF-HKHRNE 167 (243)
T ss_dssp SSCEEEEEEE-ECCTTCCCCCCTTSEECCEECSC--SBTT--BCEEEE----EETTEEEEEEEECTTTEEEEE-ECCSSE
T ss_pred CCcEEEEEEe-ccCccccCCCchhhhhhhccCcc--cccC--cceeee----ccceeEEEEEEECCCCCcCCC-EeCCCc
Confidence 6789999984 66544432 222221 1111000 0000 000000 12236677889999 988886 789999
Q ss_pred eEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEe
Q 022278 243 HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 293 (300)
Q Consensus 243 h~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 293 (300)
|.+|||+|++.+.+||+++.+++||++|++++++|++.|.|++++++|..-
T Consensus 168 e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~ 218 (243)
T 3h7j_A 168 QIGICIGGGYDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIF 218 (243)
T ss_dssp EEEEECSSCEEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred EEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 999999999999999999999999999999999999999999999988653
No 8
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.95 E-value=3.8e-26 Score=213.64 Aligned_cols=214 Identities=18% Similarity=0.154 Sum_probs=154.3
Q ss_pred eEeCCCCeeeccCCCCCcceEEEEecCC-CCCcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEecc
Q 022278 72 ALITPESHVLSPLPEWTNTLGAYLITPA-MGSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMV 149 (300)
Q Consensus 72 av~~~e~~~~~~~p~~~~~~~~~L~sp~-~g~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~~~L~~ 149 (300)
.++++++...... .+...++++++. .+..|.++++++.||+..+.|.|. .+|++||++|++++++ +|+++.|++
T Consensus 16 ~v~r~~~~~~~~~---~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~-~~~~~~l~~ 91 (337)
T 1y3t_A 16 YLLRSGEGERYLF---GRQVATVMANGRSTGDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL-DGERYLLIS 91 (337)
T ss_dssp EEECTTCSEEEEE---TTEEEEEEECHHHHTSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE-TTEEEEECT
T ss_pred EEecCCCccEEEE---CCeEEEEEeecCCCCCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE-CCEEEEECC
Confidence 3455555433222 346788888776 567999999999999887777777 8999999999999999 999999999
Q ss_pred CcEEEeCCCCceEEee-CCeEEEEEEEeec----------cccCCC-Ccc---------ee----------ecc------
Q 022278 150 DSYTYLPPNFAHSLRA-EGSATLVVFERRY----------ASLENH-ITE---------QI----------VGS------ 192 (300)
Q Consensus 150 Gds~yfpa~~~H~~~N-~~~a~vl~v~~~y----------~~~~g~-~p~---------~~----------~~~------ 192 (300)
||++++|++.+|.++| ..+++++|+..+- ++..+. .|. .+ +..
T Consensus 92 Gd~~~~p~~~~H~~~n~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~l~~~a~~~gv~~~~~~~~~~ 171 (337)
T 1y3t_A 92 GDYANIPAGTPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAVATIVFLDEAKPAC 171 (337)
T ss_dssp TCEEEECTTCCEEEEECSTTEEEEEEEETTSSTHHHHHHSEECSCSSCCSSCCCCCTTCTTGGGTSSCEECCCCCCCSSC
T ss_pred CCEEEECCCCcEEEEECCCCeEEEEEECCCCHHHHHHHhCcccccccCCCCCCcccCHHHHHHhHhhccEEEcCCCCccc
Confidence 9999999999999999 4469999884432 111221 110 00 000
Q ss_pred ------CCCCCCcc------------cCCceeEEEEeeCCC-CCcceEEEEEEecC-CcccCcceeec-cceEEEEEEee
Q 022278 193 ------TDKQPLLE------------TPGEVFQLRKLLPQA-VPFDFNIHIMDFQP-GDFLNVKEVHY-NQHGLLLLEGQ 251 (300)
Q Consensus 193 ------~~d~~~~~------------~~g~~~~~~~l~p~~-~~~~~~~~~~tl~P-G~~~p~~~~H~-~eh~~~iL~G~ 251 (300)
...++... +..++...+.|.+.. .+..+ +.+.++.| |...+. |.|. .+|.+|||+|+
T Consensus 172 ~~~~~~~~~l~~~~~~~v~r~~~~~~~~~~g~~~~~l~~~~~~~~~~-~~~~~~~p~g~~~~~-h~H~~~~e~~~vl~G~ 249 (337)
T 1y3t_A 172 SAKLAELTELPDGAVPYVLESGEGDRLLTGDQLHRIVAAQKNTDGQF-IVVSSEGPKGDRIVD-HYHEYHTETFYCLEGQ 249 (337)
T ss_dssp SCEECCBCSCCSSSCCEEECTTCSEEEEETTEEEEEEECGGGTTTSC-EEEEEEECSCCCCCC-EECSSCEEEEEEEESC
T ss_pred cccchhhhcCCCCCCCEEECCCCcCEEEECCcEEEEEecccccCCcE-EEEEEEcCCCCCCCC-cCCCCCcEEEEEEeCE
Confidence 00111110 000223456666533 33333 44556767 556665 7787 68999999999
Q ss_pred EEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 252 GIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 252 G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+.+++||+++.+++||+++++++++|++.|.|+ +++|++.
T Consensus 250 ~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v 289 (337)
T 1y3t_A 250 MTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGV 289 (337)
T ss_dssp EEEEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEE
T ss_pred EEEEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEE
Confidence 999999999999999999999999999999998 8888876
No 9
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=9.1e-24 Score=200.24 Aligned_cols=203 Identities=15% Similarity=0.148 Sum_probs=151.3
Q ss_pred ceEEEEecCCC-C-CcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEc--CC--cEEEeccCcEEEeCCCCceE
Q 022278 90 TLGAYLITPAM-G-SHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNA--SG--VSSKLMVDSYTYLPPNFAHS 162 (300)
Q Consensus 90 ~~~~~L~sp~~-g-~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~--gg--~~~~L~~Gds~yfpa~~~H~ 162 (300)
..++.+.++.. . ..+.+..++++||+....|.|. .+|++||++|++++++. +| +++.|++||++|+|++..|.
T Consensus 36 G~~~~~~~~~~p~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~ 115 (361)
T 2vqa_A 36 GTTKQVGTYNFPVSKGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHS 115 (361)
T ss_dssp EEEEEESTTTCTTCCSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEE
T ss_pred ceEEEeChhhCccccceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEE
Confidence 34444444433 2 4688999999999877777677 99999999999999982 23 57999999999999999999
Q ss_pred Eee--CCeEEEEEEEeeccccC---------------------------------CCCccee------------------
Q 022278 163 LRA--EGSATLVVFERRYASLE---------------------------------NHITEQI------------------ 189 (300)
Q Consensus 163 ~~N--~~~a~vl~v~~~y~~~~---------------------------------g~~p~~~------------------ 189 (300)
+.| +++++++++.....+.+ ......+
T Consensus 116 ~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~~vLa~~~~v~~~~~~~l~~~~~~i~~~~~~p~~~~~~~~~~~~ 195 (361)
T 2vqa_A 116 IEGIGPDTAKFLLVFNDGTFSEGATFSVTDWLSHTPIAWVEENLGWTAAQVAQLPKKQVYISSYGPASGPLASATPQGQT 195 (361)
T ss_dssp EEECSSSCEEEEEEESSTTCCTTSSEEHHHHHHTSCHHHHHHHHTCCHHHHTTSCSSCCCEECSSCCCCCGGGCCCSSCC
T ss_pred EEeCCCCCEEEEEEECCCCccccceecHhHHHHhCCHHHHHHHhCcCHHHHHhccccCceEEeCCCCCCccccccccCcC
Confidence 999 47899999876654432 0000000
Q ss_pred -------eccCCCCCCc-ccCCceeEEEEeeCCCC-C-cceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEe--
Q 022278 190 -------VGSTDKQPLL-ETPGEVFQLRKLLPQAV-P-FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRL-- 256 (300)
Q Consensus 190 -------~~~~~d~~~~-~~~g~~~~~~~l~p~~~-~-~~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~-- 256 (300)
+-+..+.+.. ...|+ .++.+++.+. . ..+.+.+++++||+.++. |.|.. +|.+|||+|++.+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gg--~~~~~~~~~~~~~~~~~~~~~~l~pg~~~~~-H~H~~~~E~~~Vl~G~~~~~v~~ 272 (361)
T 2vqa_A 196 AKIEVPHTHNLLGQQPLVSLGGN--ELRLASAKEFPGSFNMTGALIHLEPGAMRQL-HWHPNADEWQYVLDGEMDLTVFA 272 (361)
T ss_dssp CBCCSCCEEECTTSCCSEEETTE--EEEEECTTTCTTSTTCEEEEEEECTTCEEEE-EECSSCCEEEEEEESCEEEEEEC
T ss_pred CCCCcceEeccccCCCcccCCCc--eEEEEehhhCcCcccceEEEEEECCCccccc-ccCCCCCEEEEEEeCEEEEEEEc
Confidence 0011111111 11122 3455554332 2 368889999999999987 67766 899999999999999
Q ss_pred -CCE--EEEccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 257 -GDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 257 -~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
||+ ++.+++||+++++++++|++.|.|+++++||+..+-
T Consensus 273 ~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 273 SEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp STTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred CCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 888 999999999999999999999999999999998753
No 10
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.92 E-value=1.7e-23 Score=200.36 Aligned_cols=190 Identities=16% Similarity=0.193 Sum_probs=146.0
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CCc--EEEeccCcEEEeCCCCceEEee-CCeEEEEEEEe
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA--SGV--SSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFER 176 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg~--~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v~~ 176 (300)
..|.+..+++.||+..+.|.|..+|++||++|++++++. +|+ ++.|++||.+++|++..|.++| .++++++++..
T Consensus 77 ~~~~~~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~~v~~ 156 (385)
T 1j58_A 77 ENLASVNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEEGAEFLLVFD 156 (385)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEEEEEEEEEES
T ss_pred CceEEEEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCCCEEEEEEEC
Confidence 479999999999997777878899999999999999982 345 6799999999999999999999 44577777432
Q ss_pred ecccc--C-------------------------------------------------------CCCcceeeccCCCCCCc
Q 022278 177 RYASL--E-------------------------------------------------------NHITEQIVGSTDKQPLL 199 (300)
Q Consensus 177 ~y~~~--~-------------------------------------------------------g~~p~~~~~~~~d~~~~ 199 (300)
.-... . +..|..++-++.+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~p~evla~~~~vs~~~~~~l~~~~~~i~~~~~p~~l~~~~~~~~~~~~~~~~v~~~~~~~~~ 236 (385)
T 1j58_A 157 DGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPYPFTYRLLEQEPI 236 (385)
T ss_dssp CTTCCGGGEEEHHHHHHTSCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSSCSEEEGGGSCCE
T ss_pred CCCccccchhhhhhhhhcccHHHHHHHhCCCHHHHHhcccccceEeccCCCCccccccccCCCCCCCCCeeeecccCCCe
Confidence 21100 0 00111222233333332
Q ss_pred ccCCceeEEEEeeCCCCC--cceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeC-----CEEEEccCCcEEEe
Q 022278 200 ETPGEVFQLRKLLPQAVP--FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG-----DSWYPVQAGDVLWM 271 (300)
Q Consensus 200 ~~~g~~~~~~~l~p~~~~--~~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~-----g~~~~v~~GD~i~~ 271 (300)
..+++ ..+.+++.+.. ..+.+.+++++||+..+. |.|.. +|.+|||+|++.+.++ ++++.+++||++++
T Consensus 237 ~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~pG~~~~~-h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~i 313 (385)
T 1j58_A 237 ESEGG--KVYIADSTNFKVSKTIASALVTVEPGAMREL-HWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYV 313 (385)
T ss_dssp ECSSE--EEEEESTTTSTTCCSCEEEEEEECTTCEEEE-EECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEE
T ss_pred eCCCc--eEEEeecccCCcccceEEEEEEECCCcccCc-eeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEE
Confidence 22333 34666665443 478999999999999987 67776 8999999999999998 89999999999999
Q ss_pred CCCCceeEEecCCccEEEEEEee
Q 022278 272 APFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
+++++|++.|.|+++++|++.-.
T Consensus 314 p~~~~H~~~n~~~~~~~~l~v~~ 336 (385)
T 1j58_A 314 PFAMGHYVENIGDEPLVFLEIFK 336 (385)
T ss_dssp CTTCBEEEEECSSSCEEEEEEES
T ss_pred CCCCeEEEEECCCCCEEEEEEEC
Confidence 99999999999999999998744
No 11
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.90 E-value=1.5e-22 Score=195.37 Aligned_cols=192 Identities=13% Similarity=0.160 Sum_probs=145.4
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEE-EEcCCcEEEeccCcEEEeCCCCceEEee-CCeEEEEEEEe--
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAML-TNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFER-- 176 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l-~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v~~-- 176 (300)
+..+...+.+++||+..+.|.|..+|+.|||+|+..+ .+ +|+++.+++||.+++|++..|...| +....+.|+.-
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t~v-~G~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~v~d 198 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAASALRFIMEGSGAYTIV-DGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 198 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSCEEEEEEECSCEEEEE-TTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCeeEEEEEEECCCCCcCCccCCcceEEEEEEeeEEEEEE-CCEEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEEccc
Confidence 4579999999999999999988889999999999977 77 9999999999999999999999999 65444444421
Q ss_pred ----ecccc------C-CCCc----c----------eeec---cC--CC-----CCCcc-------------cCC-ceeE
Q 022278 177 ----RYASL------E-NHIT----E----------QIVG---ST--DK-----QPLLE-------------TPG-EVFQ 207 (300)
Q Consensus 177 ----~y~~~------~-g~~p----~----------~~~~---~~--~d-----~~~~~-------------~~g-~~~~ 207 (300)
.|... + ...| . ++.. .+ .. .++.. -++ +++.
T Consensus 199 ~Pl~~~l~~~f~e~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~sP~~~y~w~~~~~~L~~~~~~~~~~~~~~~~ 278 (394)
T 3bu7_A 199 IPLTNCLEANFYEVHPNDYQTTDIPLNDSPLTYGGPALLPQLDKWDKPYSPLLKYSWEPTYEALLNYAKASDGSPYDGLI 278 (394)
T ss_dssp HHHHHHTTCCCEEECTTSSCCCCCCTTHHHHHHCSTTEEESSCCCCCSSCSCCEECHHHHHHHHHHHHTTCCCBTTTBEE
T ss_pred chhhhhcCccccccCcccccCccCCccchhhhhcCcccccccccccCCCCCcEEecHHHHHHHHHHhhhccCcCcCCceE
Confidence 11111 0 0011 1 0100 00 01 11111 011 3333
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC-
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG- 283 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G- 283 (300)
+..+-|...+ ..+.+.+.+++||+.++. |.|.+++.+|||+|+|.+.+||+.+++++||++++|++..|++.|+|
T Consensus 279 l~l~nP~~g~~~~~tl~~~~~~l~PG~~~~~-HrH~~~~v~~VleG~G~~~V~ge~~~~~~GD~~~iP~g~~H~~~N~g~ 357 (394)
T 3bu7_A 279 LRYTNPQTGGHPMLTMGASMQMLRPGEHTKA-HRHTGNVIYNVAKGQGYSIVGGKRFDWSEHDIFCVPAWTWHEHCNTQE 357 (394)
T ss_dssp EEECCTTTSSCSSSSCEEEEEEECTTCBCCC-EEESSCEEEEEEECCEEEEETTEEEEECTTCEEEECTTCCEEEEECCS
T ss_pred EEEeCCCCCCCCCCeeeEEEEEECCCCcCCC-cccCCcEEEEEEeCeEEEEECCEEEEEeCCCEEEECCCCeEEeEeCCC
Confidence 3333365432 468889999999999997 77888899999999999999999999999999999999999999999
Q ss_pred CccEEEEEEee
Q 022278 284 KTRTRYLLYKD 294 (300)
Q Consensus 284 ~e~~~fi~~kd 294 (300)
++++.+|++.|
T Consensus 358 ~e~~~ll~i~D 368 (394)
T 3bu7_A 358 RDDACLFSFND 368 (394)
T ss_dssp SCCEEEEEEES
T ss_pred CCCeEEEEeeC
Confidence 89999999977
No 12
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.89 E-value=2.6e-22 Score=191.01 Aligned_cols=199 Identities=13% Similarity=0.133 Sum_probs=142.0
Q ss_pred ceEEEEecCC-CCCcEEEEEEEEcCCCcCC---CCCCC-ceEEEEEEECEEEEEEcCC-----cEEEeccCcEEEeCCCC
Q 022278 90 TLGAYLITPA-MGSHFVMYLANMQENARSA---LPPHD-VERFIFVVQGSAMLTNASG-----VSSKLMVDSYTYLPPNF 159 (300)
Q Consensus 90 ~~~~~L~sp~-~g~~f~~~lv~l~PG~~~~---~~~h~-gEEf~yVLeG~v~l~v~gg-----~~~~L~~Gds~yfpa~~ 159 (300)
..+++++++. .+..|+++ .++.|++... .|.|. .+|++|||+|++++.+ ++ +++.|++||++++|++.
T Consensus 33 ~~~~~l~~~~~~~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v-~~~~g~~~~~~L~~GD~v~ip~g~ 110 (350)
T 1juh_A 33 QLYRFYVTGPSSGYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWA-QSGNETQQTRVLSSGDYGSVPRNV 110 (350)
T ss_dssp EEEEEEECHHHHTTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEE-EETTSCCEEEEEETTCEEEECTTE
T ss_pred ceEEEEecCCCCCCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEE-CCcCCceEEEEECCCCEEEECCCC
Confidence 3456666654 45678888 6667776654 56565 8999999999999999 88 89999999999999999
Q ss_pred ceEEee-CCeEEEEEEEeecc----------ccC----C---------------------------------CCcce-ee
Q 022278 160 AHSLRA-EGSATLVVFERRYA----------SLE----N---------------------------------HITEQ-IV 190 (300)
Q Consensus 160 ~H~~~N-~~~a~vl~v~~~y~----------~~~----g---------------------------------~~p~~-~~ 190 (300)
+|+++| ...++++++..+-. +.+ + ..|.. ++
T Consensus 111 ~H~~~n~~~~~~~l~v~~p~~~~~~f~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (350)
T 1juh_A 111 THTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSSSDSSSTTGPDSSTISTLQSFDVYAELSFTPRTDTV 190 (350)
T ss_dssp EEEEEECSTTEEEEEEEESSCTTHHHHHHSEECCCTTCCSSCCC--------------CGGGGGGTCEECTTCCCCCCCB
T ss_pred cEEEEeCCCCCEEEEEEcCccHHHHHHHhccccccccccccCCcccccCccccCHHHHHHHHHHcCCEeccccCChhHhh
Confidence 999999 33348888754421 111 0 00110 00
Q ss_pred -------ccCCCCCCc-------c-c--C--C--------ceeEEEEeeC-CCCCc-ceEEEEEEecC---CcccCccee
Q 022278 191 -------GSTDKQPLL-------E-T--P--G--------EVFQLRKLLP-QAVPF-DFNIHIMDFQP---GDFLNVKEV 238 (300)
Q Consensus 191 -------~~~~d~~~~-------~-~--~--g--------~~~~~~~l~p-~~~~~-~~~~~~~tl~P---G~~~p~~~~ 238 (300)
..|.+-|.. + + . | +++.+|.|+. +.... .|.|+.+++++ |+.++ +|+
T Consensus 191 ~~~a~~~~~w~~~~~~~l~~~~~p~~~~~~~g~~~~~~~~g~v~~~~l~~~~~~~~~~f~~~~i~~~~~~~g~~~~-~h~ 269 (350)
T 1juh_A 191 NGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVP-TWS 269 (350)
T ss_dssp TTEESSSSCSSSSCCCCCSSTTCCEEECTTCSCEEEECTTSCEEEEEEECHHHHGGGCEEEEEEEECCCCTTSCCC-CBC
T ss_pred ccccccCCccccCcccccCCCCCceEECCCccchhhcccCCcEEEEEEEeCCcCceeEEEEEEEeeccccCCCCCC-ccc
Confidence 011111111 1 0 0 1 2334666664 33344 78999999999 44676 478
Q ss_pred eccceEEEEEEeeEEEEeCC-EEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 239 HYNQHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 239 H~~eh~~~iL~G~G~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
|.+++.+|||+|++.++++| +++.+++||+++||+|.+|+++|.++. ..+|+.
T Consensus 270 ~~~~~~~~vleG~~~i~i~g~~~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~ 323 (350)
T 1juh_A 270 FPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFV 323 (350)
T ss_dssp CSSCEEEEEEESCEEEEETTSCCEEECTTCEEEECTTCCEEEEESSSS-EEEEEE
T ss_pred CCCcEEEEEEeeEEEEEECCeEEEEeCCCCEEEECCCCCEEEEecCCe-EEEEEE
Confidence 99999999999999999999 999999999999999999999998765 555543
No 13
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.89 E-value=3.8e-23 Score=179.98 Aligned_cols=148 Identities=11% Similarity=0.142 Sum_probs=122.8
Q ss_pred cCCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCcceeeeeee--------eEeCCCCeeec--cCCCCCcc
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKRDH--------ALITPESHVLS--PLPEWTNT 90 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~~~--------av~~~e~~~~~--~~p~~~~~ 90 (300)
-|+++||+++|+|+++||++|||.. .|+. |+++|+++...|+... .+++.+++... ......+.
T Consensus 24 ~s~~~la~~~gis~~~ls~~e~g~~~~p~~~~l~~ia~~l~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 103 (198)
T 2bnm_A 24 MDHAALASLLGETPETVAAWENGEGGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMPDERPILKGVRDNVDYY 103 (198)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTTCTTCBHHHHHHHHHHTTSCTGGGSCCCCCCCBTTBCCCCGGGCCEECCSTTCSTTE
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHhCCCHHHEEccCCCCcccCceEEeecccccccccccCCCce
Confidence 4789999999999999999999999 9998 9999999999998621 33444444221 11222345
Q ss_pred eEEEEecCCCCCcEEEEEEEEcCCCcCC---CCCCCceEEEEEEECEEEEEEcCC----cEEEeccCcEEEeCCCCceEE
Q 022278 91 LGAYLITPAMGSHFVMYLANMQENARSA---LPPHDVERFIFVVQGSAMLTNASG----VSSKLMVDSYTYLPPNFAHSL 163 (300)
Q Consensus 91 ~~~~L~sp~~g~~f~~~lv~l~PG~~~~---~~~h~gEEf~yVLeG~v~l~v~gg----~~~~L~~Gds~yfpa~~~H~~ 163 (300)
....+.++..+..|+++.++++||+... .|.|+++|++||++|++++.+ ++ +++.|++||++|||++.+|.+
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~-~~~~~~~~~~l~~GD~~~~~~~~~H~~ 182 (198)
T 2bnm_A 104 VYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKW-GDKENPKEALLPTGASMFVEEHVPHAF 182 (198)
T ss_dssp EEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEE-SCTTSCEEEEECTTCEEEECTTCCEEE
T ss_pred EEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEE-CCcCCcccEEECCCCEEEeCCCCceEE
Confidence 6667776667789999999999999875 568899999999999999999 88 999999999999999999999
Q ss_pred eeC---CeEEEEEEE
Q 022278 164 RAE---GSATLVVFE 175 (300)
Q Consensus 164 ~N~---~~a~vl~v~ 175 (300)
+|. ++++++|+.
T Consensus 183 ~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 183 TAAKGTGSAKLIAVN 197 (198)
T ss_dssp EESTTSCCEEEEEEE
T ss_pred EecCCCCCeEEEEEe
Confidence 985 689999884
No 14
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.89 E-value=8.3e-22 Score=187.97 Aligned_cols=189 Identities=11% Similarity=0.119 Sum_probs=144.3
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEE-EEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeec
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAML-TNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRY 178 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l-~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y 178 (300)
..|.+.+++++||+..+.|.|..+|++||++|++++ .+ +|+++.|++||++++|++.+|.+.| +++++++++...-
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t~v-~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~p 176 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQSALRFIVEGKGAFTAV-DGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDLP 176 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSCEEEEEEECSSCEEEE-TTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECHH
T ss_pred CcEEEEEEEECCCCCcCCeecCcceEEEEEEEEEEEEEE-CCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECch
Confidence 368999999999998888888999999999999999 88 9999999999999999999999999 5788988885321
Q ss_pred ----------cccCC-CCc----c---------eeec--cC-------CCCCCccc-----------CC---ceeEEEEe
Q 022278 179 ----------ASLEN-HIT----E---------QIVG--ST-------DKQPLLET-----------PG---EVFQLRKL 211 (300)
Q Consensus 179 ----------~~~~g-~~p----~---------~~~~--~~-------~d~~~~~~-----------~g---~~~~~~~l 211 (300)
+..+. ..| . .+.. .. -..++..+ ++ .+..++.+
T Consensus 177 ~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~sp~~~y~~~~~~~~l~~~~~~~~~~~~~G~~~~~~ 256 (354)
T 2d40_A 177 LVNILGCGFAEDYPEEQQPVTRKEGDYLPRYAANMLPLRHQTGNSSPIFNYRYDRSREVLHDLTRLGDADEWDGYKMRYV 256 (354)
T ss_dssp HHHHHTCCCEEECC--CCCCCSCTTTHHHHHSSSEECSSCCCCSSCSCCEECHHHHHHHHHHHHTTSCCBTTTBEEEEEC
T ss_pred hHhhcCceeeecCccccCcCcCCcchhhhhhccCCCCccccccCCCcceeccHHHHHHHHHhhhhccccCCCCCeEEEEe
Confidence 11110 000 0 0000 00 00111110 01 23345555
Q ss_pred eCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEE
Q 022278 212 LPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTR 288 (300)
Q Consensus 212 ~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 288 (300)
.|...+ ..+.+....|+||+..+. |.|..++.+||++|+|.+++||+.+.+++||++++|++..|++.|. +++.
T Consensus 257 np~t~~~~~~ti~~~~~~l~pG~~~~~-H~h~~~ev~~v~~G~g~~~v~~~~~~~~~GD~~~vP~~~~H~~~n~--e~~~ 333 (354)
T 2d40_A 257 NPVTGGYPMPSMGAFLQLLPKGFASRV-ARTTDSTIYHVVEGSGQVIIGNETFSFSAKDIFVVPTWHGVSFQTT--QDSV 333 (354)
T ss_dssp CTTTSSCSSSSCEEEEEEECTTCBCCC-BEESSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCCEEEEEE--EEEE
T ss_pred CCCcCCCCCCcceeEEEEECCCCCCCc-eecCCcEEEEEEeCeEEEEECCEEEEEcCCCEEEECCCCeEEEEeC--CCEE
Confidence 565332 367778889999999987 7888889999999999999999999999999999999999999994 8899
Q ss_pred EEEEee
Q 022278 289 YLLYKD 294 (300)
Q Consensus 289 fi~~kd 294 (300)
+|++-|
T Consensus 334 l~~~~d 339 (354)
T 2d40_A 334 LFSFSD 339 (354)
T ss_dssp EEEEES
T ss_pred EEEEcC
Confidence 999866
No 15
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.85 E-value=8.8e-22 Score=170.88 Aligned_cols=145 Identities=12% Similarity=0.058 Sum_probs=118.3
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEEecCCCC
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYLITPAMG 101 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L~sp~~g 101 (300)
.|+++||+++|+|+++||++|||...|+. |+++|+++...|+....--..++.+. . ...+.....+.++..+
T Consensus 25 ltq~~lA~~~gis~~~is~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~~~~--~-~~~g~~~~~l~~~~~~ 101 (192)
T 1y9q_A 25 LSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSF--P-DDLNMKIHTLFPYAAD 101 (192)
T ss_dssp CCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHHHHTCCSGGGGTTSTHHHHHCCBC--T-TCTTEEEEEEEEEETT
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHcCCCCCCCccceEE--e-CCCCEEEEEeccCCCC
Confidence 48899999999999999999999999988 99999999999986210000011111 1 1234566677766777
Q ss_pred CcEEEEEEEEcCCCcCC--CCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEe
Q 022278 102 SHFVMYLANMQENARSA--LPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFER 176 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~--~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~ 176 (300)
..|+++.++++||+... .|.|+.+||+||++|++++.+ +|+++.|++||++|||++.+|.++| ++++ ++|+..
T Consensus 102 ~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~-~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 102 TGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF-DEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp TTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEE-TTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEE
T ss_pred CcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE-CCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEe
Confidence 89999999999998765 456888999999999999999 9999999999999999999999999 5788 888853
No 16
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.81 E-value=3.7e-18 Score=163.15 Aligned_cols=200 Identities=14% Similarity=0.134 Sum_probs=148.6
Q ss_pred eEEEEecCCCC------CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEE-EEEcCCcEEEeccCcEEEeCCCCceEE
Q 022278 91 LGAYLITPAMG------SHFVMYLANMQENARSALPPHDVERFIFVVQGSAM-LTNASGVSSKLMVDSYTYLPPNFAHSL 163 (300)
Q Consensus 91 ~~~~L~sp~~g------~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~-l~v~gg~~~~L~~Gds~yfpa~~~H~~ 163 (300)
+...|+.|..+ ..|...+.+++||+..+.|.|..+++.||++|+.. +.+ +|+++.+++||++++|++..|.+
T Consensus 84 r~~~l~nP~~~~~~~~t~~L~a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~~v-dG~~~~~~~GD~v~iP~g~~H~~ 162 (368)
T 3nw4_A 84 RALGLANPGLGGNAYISPTMWAAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWTVV-NGDPVRMSRGDLLLTPGWCFHGH 162 (368)
T ss_dssp CEEECCCTTSTTCSCSSSSCEEEEEEECTTCEEEEEEESSCEEEECSSCEEEEEEE-TTEEEEEETTCEEEECTTCCEEE
T ss_pred EEEEEeCCCCCCcCccCCceEEEEEEECCCCccCceecccceEEEEEecceEEEEE-CCEEEEEeCCCEEEECCCCcEEe
Confidence 44455555543 46999999999999998898889999999999996 888 99999999999999999999999
Q ss_pred ee--CCeEEEEEEEe----e------cccc---------------------CCCCcceeeccCCC-----CCCccc----
Q 022278 164 RA--EGSATLVVFER----R------YASL---------------------ENHITEQIVGSTDK-----QPLLET---- 201 (300)
Q Consensus 164 ~N--~~~a~vl~v~~----~------y~~~---------------------~g~~p~~~~~~~~d-----~~~~~~---- 201 (300)
.| ++++.+|.+.. . |+.. ++..|......-.. .||.++
T Consensus 163 ~N~gde~l~~l~v~D~Pl~~~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~~~~~sP~~~ypw~~~~~aL 242 (368)
T 3nw4_A 163 MNDTDQPMAWIDGLDIPFSQQMDVGFFEFGSDRVTDYATPNFSRGERLWCHPGLRPLSGLQNTVASPIGAYRWEFTDRAL 242 (368)
T ss_dssp EECSSSCEEEEEEECHHHHHHHTCCCEEECCSSCSCCCCCSSCHHHHHHCSTTCCCGGGCSCCSSCSCCEECHHHHHHHH
T ss_pred EeCCCCCeEEEEecchHHHhhcCceeeecccccccccccccCCcccchhhccccccccccCCCCCCCceecCHHHHHHHH
Confidence 99 56777665431 1 1111 11111110000000 111110
Q ss_pred --------CC-----c-eeE-EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEc
Q 022278 202 --------PG-----E-VFQ-LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV 263 (300)
Q Consensus 202 --------~g-----~-~~~-~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v 263 (300)
.| . ++. ++..-|..++ ..+.+....|.||..+.. |.|..+..|+|++|+|.+.+||+...+
T Consensus 243 ~~~~~l~~~~~~~~~~~g~~~~~y~NP~tg~~~~pti~~~~~~L~pG~~t~~-hRht~s~Vy~V~eG~G~~~I~~~~~~w 321 (368)
T 3nw4_A 243 TEQLLLEDEGQPATVAPGHAAIRYVNPTTGGDVMPTLRCEFHRLRAGTETAT-RNEVGSTVFQVFEGAGAVVMNGETTKL 321 (368)
T ss_dssp HHHHHHHHTTCSCSSBTTEEEEECBCTTTSSBSSSSCEEEEEEECTTCBCCC-EEESSCEEEEEEESCEEEEETTEEEEE
T ss_pred HhhhhhhhccCCCcccCceEEEEEeCCCCCCCcchhHHhheEEECCCCccCC-eeccccEEEEEEeCcEEEEECCEEEEe
Confidence 01 1 333 3333465443 468888999999999986 788888999999999999999999999
Q ss_pred cCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 264 QAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 264 ~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
++||++.+|++.+|++.|. +++.++.+-|
T Consensus 322 ~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 322 EKGDMFVVPSWVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp CTTCEEEECTTCCEEEEES--SSEEEEEEES
T ss_pred cCCCEEEECCCCcEEEEeC--CCEEEEEEeC
Confidence 9999999999999999997 6888888877
No 17
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.74 E-value=5.8e-17 Score=159.92 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=65.3
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCC----EEEE--ccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD----SWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g----~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
++.+..++|+||+..+. |.|.+ .|.+|||+|++.+.+.+ +.+. |++||++++|+|.+|++.| |+++++|++
T Consensus 337 ~is~~~v~l~pGa~~~p-H~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~ 414 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVP-HYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVS 414 (476)
T ss_dssp TCCEEEEEECTTCEEEE-EEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEE
T ss_pred cceEEEEEecCCceecc-eECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEE
Confidence 68889999999999986 78875 58899999999998865 4444 9999999999999999999 899999999
Q ss_pred Ee
Q 022278 292 YK 293 (300)
Q Consensus 292 ~k 293 (300)
+.
T Consensus 415 f~ 416 (476)
T 1fxz_A 415 FK 416 (476)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 18
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.73 E-value=4.8e-17 Score=138.10 Aligned_cols=106 Identities=16% Similarity=0.303 Sum_probs=94.6
Q ss_pred ccCCCCCCcccCC-c-----eeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEcc
Q 022278 191 GSTDKQPLLETPG-E-----VFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQ 264 (300)
Q Consensus 191 ~~~~d~~~~~~~g-~-----~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~ 264 (300)
-+|++++...+.. + ++..|+|+..+. ..+.+++++++||+.++. |.|.++|.+||++|++.+++||+++.++
T Consensus 10 ~~w~~v~~~~~~~~~~~p~~g~~~~~L~~~~~-~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~v~v~g~~~~l~ 87 (156)
T 3kgz_A 10 GRWDGVAVMPYKQTAEAPFQDVSRQLLFADPN-LACEWRYFEVDEGGYSTL-ERHAHVHAVMIHRGHGQCLVGETISDVA 87 (156)
T ss_dssp TEETTCCCEECCCCSSCSSEEEEEEEEECCTT-CSEEEEEEEEEEEEECCC-BBCSSCEEEEEEEEEEEEEETTEEEEEE
T ss_pred CCccccchhhcccCCCCCcCCeEEEEEEcCCC-CcEEEEEEEECCCCccCc-eeCCCcEEEEEEeCEEEEEECCEEEEeC
Confidence 3688888888753 2 578888886553 678899999999999997 7888999999999999999999999999
Q ss_pred CCcEEEeCCCCceeEEecCCccEEEEEEeecCCC
Q 022278 265 AGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRN 298 (300)
Q Consensus 265 ~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr~ 298 (300)
+||++|++++++|++.|.|+++++||+.-...||
T Consensus 88 ~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 88 QGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp TTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred CCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 9999999999999999999999999999888887
No 19
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.71 E-value=3.4e-16 Score=152.22 Aligned_cols=192 Identities=16% Similarity=0.162 Sum_probs=137.2
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEE---cCCcEEEeccCcEEEeCCCCceEEeeC---CeEEEEEEEe
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN---ASGVSSKLMVDSYTYLPPNFAHSLRAE---GSATLVVFER 176 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v---~gg~~~~L~~Gds~yfpa~~~H~~~N~---~~a~vl~v~~ 176 (300)
++.+..++++||+...+|.|..+|.+||++|++++.+ ++++++.|++||.+++|+|..|.+.|. ++++++.+..
T Consensus 48 ~~s~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~ 127 (416)
T 1uij_A 48 DYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAI 127 (416)
T ss_dssp TCEEEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEec
Confidence 4899999999999887777788999999999999987 246789999999999999999999993 5788887765
Q ss_pred ecc-c-------cCCC-CcceeeccCC----------------CCC-Cc-------------------------------
Q 022278 177 RYA-S-------LENH-ITEQIVGSTD----------------KQP-LL------------------------------- 199 (300)
Q Consensus 177 ~y~-~-------~~g~-~p~~~~~~~~----------------d~~-~~------------------------------- 199 (300)
... | +.|. .|..+++... .++ ..
T Consensus 128 ~~~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~ 207 (416)
T 1uij_A 128 PVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSR 207 (416)
T ss_dssp ESSBTTBCCEEESSCBSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCTTCGGGSBSSSEEECCHHHHHHHTSSCBCCCG
T ss_pred cCCCCCcceeeeecCCcccchhhhcCCHHHHHHHhCcCHHHHHhhhhccccccccCcceEEEeCCcccchhhhcccccCC
Confidence 321 0 1110 0000111000 001 00
Q ss_pred ----------------c-cCC-ceeEEEEeeCCCCC----cceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEe
Q 022278 200 ----------------E-TPG-EVFQLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL 256 (300)
Q Consensus 200 ----------------~-~~g-~~~~~~~l~p~~~~----~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~ 256 (300)
+ +.. ++ .++.+.+.+.. -++.+..+.|+||+..+. |.|... +.+||++|+|++.+
T Consensus 208 ~g~~~~~~~~~l~~~~p~~~~~~G-~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~p-H~h~~A~Ei~~V~~G~~~v~~ 285 (416)
T 1uij_A 208 KTISSEDEPFNLRSRNPIYSNNFG-KFFEITPEKNPQLRDLDIFLSSVDINEGALLLP-HFNSKAIVILVINEGDANIEL 285 (416)
T ss_dssp GGGGCSSSCEETTSSCCSEECSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESEEEEEE
T ss_pred CCCCCcccceeccccCCCccCCCc-eEEEEChHHCccchhcCcceEEEEEcCCcEecc-eEcCCCcEEEEEEeeEEEEEE
Confidence 0 000 11 22233333321 247888999999999885 677755 78999999999975
Q ss_pred CCE-----------------EE--EccCCcEEEeCCCCceeEEecCCccEEEEEEeecCCC
Q 022278 257 GDS-----------------WY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRN 298 (300)
Q Consensus 257 ~g~-----------------~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr~ 298 (300)
-+. .+ .|++||++++|.|.+|+..|+ ++++|+++++-.+.
T Consensus 286 v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~ 344 (416)
T 1uij_A 286 VGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAEN 344 (416)
T ss_dssp EEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTT
T ss_pred EcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCC
Confidence 532 56 899999999999999999999 68999999975433
No 20
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.70 E-value=4.5e-16 Score=150.38 Aligned_cols=190 Identities=12% Similarity=0.083 Sum_probs=139.4
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEE---cCCcEEEeccCcE------EEeCCCCceEEee---CCeEE
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN---ASGVSSKLMVDSY------TYLPPNFAHSLRA---EGSAT 170 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v---~gg~~~~L~~Gds------~yfpa~~~H~~~N---~~~a~ 170 (300)
++.+..++++||+...+|.|..+|++||++|++.+.+ ++.+++.|++||. ++||+|..|.+.| +++++
T Consensus 51 ~~s~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~ 130 (397)
T 2phl_A 51 DYRLVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLR 130 (397)
T ss_dssp TCEEEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEE
T ss_pred cEEEEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeE
Confidence 4899999999999887777899999999999999987 2346799999999 9999999999998 35788
Q ss_pred EEEEEeecc-c------cCCCC-cceeeccCC----------------CCC-Cc--------------------------
Q 022278 171 LVVFERRYA-S------LENHI-TEQIVGSTD----------------KQP-LL-------------------------- 199 (300)
Q Consensus 171 vl~v~~~y~-~------~~g~~-p~~~~~~~~----------------d~~-~~-------------------------- 199 (300)
++.+...-. | +.|.. |..+++... .++ .+
T Consensus 131 ~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~~~~~vLa~af~v~~~~v~~l~~~~~~q~~~~Iv~~~~~~~~~~~~~~~~~ 210 (397)
T 2phl_A 131 IIQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEINRVLFEEEGQQEGVIVNIDSEQIKELSKHAKSS 210 (397)
T ss_dssp EEEEEEESSSSSCCEEECCCBTTBCCGGGGSCHHHHHHHHTSCHHHHHHHHTCSTTCBSSSEEECCTTTHHHHHHHHHTC
T ss_pred EEEeecCCCCccceeeeccCCCchhHHhhcCCHHHHHHHhCCCHHHHHhhhhcccccccCceEEcCcccchhhhccCCCc
Confidence 887744211 1 11210 000111000 000 00
Q ss_pred ---------c---cCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCCE-------
Q 022278 200 ---------E---TPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGDS------- 259 (300)
Q Consensus 200 ---------~---~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g~------- 259 (300)
+ -++|. ++.+.+.+ .++.+..++|+||+..+. |.|... +.+||++|+|++.+-+.
T Consensus 211 ~~~~l~~~~p~~~n~~G~--~~~v~~~~--l~is~a~v~l~pG~~~~P-H~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~ 285 (397)
T 2phl_A 211 SRKSLSKQDNTIGNEFGN--LTERTDNS--LNVLISSIEMEEGALFVP-HYYSKAIVILVVNEGEAHVELVGPKGNKETL 285 (397)
T ss_dssp ---------CEEEETTEE--EEEEEETT--TTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESEEEEEEEEECC--CCS
T ss_pred ccccccccCCcccCCCCe--EEEEeecc--CCeeEEEEEEcCCcEeee-eEcCCCCEEEEEEeeeEEEEEEeccccccCC
Confidence 0 01122 23334444 678899999999999886 677755 78999999999998755
Q ss_pred -----EEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecCCCC
Q 022278 260 -----WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRNP 299 (300)
Q Consensus 260 -----~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr~~ 299 (300)
...|++||++++|.|.+|+..|+| +++|+++++-.+.|
T Consensus 286 g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~ 328 (397)
T 2phl_A 286 EYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNN 328 (397)
T ss_dssp CEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTC
T ss_pred CceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCC
Confidence 678999999999999999999996 89999998765443
No 21
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.70 E-value=6.2e-16 Score=151.07 Aligned_cols=190 Identities=15% Similarity=0.145 Sum_probs=136.3
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc---CCcEEEeccCcEEEeCCCCceEEeeC---CeEEEEEEEe
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA---SGVSSKLMVDSYTYLPPNFAHSLRAE---GSATLVVFER 176 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~---gg~~~~L~~Gds~yfpa~~~H~~~N~---~~a~vl~v~~ 176 (300)
++.+..++|+||+...+|.|..+|.+|||+|++.+.+. +++++.|++||.+++|+|..|.+.|. ++++++.+..
T Consensus 60 ~~s~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~ 139 (434)
T 2ea7_A 60 NYRVVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAI 139 (434)
T ss_dssp TCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEec
Confidence 48999999999998888867889999999999999872 15789999999999999999999993 4788887743
Q ss_pred ec-cc-------cCCC-CcceeeccCC----------------CCC-C--------------------------------
Q 022278 177 RY-AS-------LENH-ITEQIVGSTD----------------KQP-L-------------------------------- 198 (300)
Q Consensus 177 ~y-~~-------~~g~-~p~~~~~~~~----------------d~~-~-------------------------------- 198 (300)
.- .| +.|. .|..+++... .++ .
T Consensus 140 ~s~~pg~~~~f~l~g~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~~~~~~~~q~~g~Iv~~~~~~~~~~~~~~ 219 (434)
T 2ea7_A 140 PVNNPHRFQDFFLSSTEAQQSYLRGFSKNILEASFDSDFKEINRVLFGEERQQQQGEESREEGVIVELKREQIQELMKHA 219 (434)
T ss_dssp ESSBTTBCCEEECSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHHTCC---------CCCSSSEEECCHHHHHHHHTTS
T ss_pred CCCCCCceeeeeecCCcchhhhhhcCCHHHHHHHhCCCHHHHHhhhhcccccccccccccccceEEECCcccChhhcccc
Confidence 21 11 1121 0101111000 000 0
Q ss_pred ----------c----------c---cCCceeEEEEeeCCCCC----cceEEEEEEecCCcccCcceeeccc-eEEEEEEe
Q 022278 199 ----------L----------E---TPGEVFQLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEG 250 (300)
Q Consensus 199 ----------~----------~---~~g~~~~~~~l~p~~~~----~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G 250 (300)
. + -+|| .++.+.+.+.. -++.+..++|+||+..+. |.|... +.+||++|
T Consensus 220 ~~~~~~g~~~~~~~~~l~~~~p~~~~~gG--~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~p-H~hp~A~Ei~~V~~G 296 (434)
T 2ea7_A 220 KSSSRKELSSQDEPFNLRNSKPIYSNKFG--RWYEMTPEKNPQLKDLDVFISSVDMKEGALLLP-HYSSKAIVIMVINEG 296 (434)
T ss_dssp BCCCSSCTTCSSSCEETTSSCCSEEETTE--EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEEES
T ss_pred cccCCCCCCCcccceeeccCCCceeCCCc--EEEEEChhhCccccccCcceEEEEEcCCeeecc-EEcCCCCEEEEEEee
Confidence 0 0 0112 23334444332 247888999999999885 777755 78999999
Q ss_pred eEEEEeCCE----------------EE--EccCCcEEEeCCCCceeEEecCCccEEEEEEeecCC
Q 022278 251 QGIYRLGDS----------------WY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 251 ~G~~~~~g~----------------~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr 297 (300)
+|++.+-+. .+ .|++||++++|.|.+|+..|+ +++.|+++++-.+
T Consensus 297 ~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~ 359 (434)
T 2ea7_A 297 EAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAE 359 (434)
T ss_dssp CEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCT
T ss_pred EEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCC
Confidence 999976643 45 899999999999999999999 5799999986543
No 22
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.70 E-value=3.8e-16 Score=153.00 Aligned_cols=189 Identities=14% Similarity=0.130 Sum_probs=133.9
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc-C--CcEEEeccCcEEEeCCCCceEEeeC---CeEEEEEEEe
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-S--GVSSKLMVDSYTYLPPNFAHSLRAE---GSATLVVFER 176 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~-g--g~~~~L~~Gds~yfpa~~~H~~~N~---~~a~vl~v~~ 176 (300)
++.+..++++||+...+|.|..+|++||++|++++.+. . ++++.|++||.+++|+|..|.+.|. ++++++++..
T Consensus 85 ~~s~~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~ 164 (445)
T 2cav_A 85 DYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAI 164 (445)
T ss_dssp TEEEEEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEE
T ss_pred cEEEEEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEec
Confidence 49999999999998877778899999999999999861 1 3789999999999999999999992 5899998866
Q ss_pred ec------cc--cCC-CCcceeeccCCC----------------CCCcc-------------------c------CC---
Q 022278 177 RY------AS--LEN-HITEQIVGSTDK----------------QPLLE-------------------T------PG--- 203 (300)
Q Consensus 177 ~y------~~--~~g-~~p~~~~~~~~d----------------~~~~~-------------------~------~g--- 203 (300)
+- .. +.| ..|..+++..++ ++..+ . +|
T Consensus 165 ~~~~pg~~~~F~laG~~~~~~~~~~~~~~vLa~af~v~~~~v~~l~~~~~~~g~Iv~~~~~~~~~~~~~~~~~~~~g~~~ 244 (445)
T 2cav_A 165 TFRRPGTVEDFFLSSTKRLPSYLSAFSKNFLEASYDSPYDEIEQTLLQEEQEGVIVKMPKDQIQEISKHAQSSSRKTLSS 244 (445)
T ss_dssp CCSSTTCCCEEESSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCCSSSSEEECCCC-------------------
T ss_pred cCCCCCceeeeeccCCCchhhhhhcCCHHHHHHHhCCCHHHHHhhhcccCCCCcEEEeCCcchhhhcccccccCCCCCCC
Confidence 22 11 111 111111111100 01000 0 00
Q ss_pred -----------------ceeEEEEeeCCCCC----cceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCC---
Q 022278 204 -----------------EVFQLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGD--- 258 (300)
Q Consensus 204 -----------------~~~~~~~l~p~~~~----~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g--- 258 (300)
++ .+..+.+.+.. -++.+.+.+|+||+..+. |.|+.. +..||++|+|.+.+=+
T Consensus 245 ~~~~~~l~~~~p~~~~~~G-~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~P-H~hp~A~ei~~V~~G~~~v~vv~~~~ 322 (445)
T 2cav_A 245 QDKPFNLRSRDPIYSNNYG-KLYEITPEKNSQLRDLDILLNCLQMNEGALFVP-HYNSRATVILVANEGRAEVELVGLEQ 322 (445)
T ss_dssp -CCCEETTSSCCSEESSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEEESCEEEEEEEC--
T ss_pred cccceeccccCCCccCCCc-eEEEeChHHCcccccCCCceEEEEeeCCceeee-EECCCCcEEEEEEeeEEEEEEEeCCC
Confidence 01 11222222221 158899999999999986 788766 6789999999877432
Q ss_pred ---------E----EEEccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 259 ---------S----WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 259 ---------~----~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
+ ...+++||+.++|.|.+|+..|+ +++.|+.++.-
T Consensus 323 ~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~ 370 (445)
T 2cav_A 323 QQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVN 370 (445)
T ss_dssp ---------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEES
T ss_pred cccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEcc
Confidence 2 55699999999999999999998 57999999843
No 23
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.69 E-value=1.5e-15 Score=149.22 Aligned_cols=192 Identities=14% Similarity=0.162 Sum_probs=136.2
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CC-----------------------cEEEeccCcEEEeC
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA--SG-----------------------VSSKLMVDSYTYLP 156 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg-----------------------~~~~L~~Gds~yfp 156 (300)
..+.+..++|+||+-..+|.|...|++||++|++.+.+. ++ +.+.|++||.++||
T Consensus 61 ~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iP 140 (459)
T 2e9q_A 61 AGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVP 140 (459)
T ss_dssp HTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEEC
T ss_pred CceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEEC
Confidence 467888999999998877778899999999999999872 21 35699999999999
Q ss_pred CCCceEEee--CCeEEEEEEEeecc---ccC---------CC-Cc---------------------ceeeccCC------
Q 022278 157 PNFAHSLRA--EGSATLVVFERRYA---SLE---------NH-IT---------------------EQIVGSTD------ 194 (300)
Q Consensus 157 a~~~H~~~N--~~~a~vl~v~~~y~---~~~---------g~-~p---------------------~~~~~~~~------ 194 (300)
+|.+|.+.| +++++++++...-. +++ |. .+ ..+++..+
T Consensus 141 aG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~nif~gf~~evLa~ 220 (459)
T 2e9q_A 141 AGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGEKSGNIFSGFADEFLEE 220 (459)
T ss_dssp TTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------CCCCTTTTSCHHHHHH
T ss_pred CCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccccccccccchhhcCCHHHHHh
Confidence 999999999 56888887755321 111 11 00 01111110
Q ss_pred ----------------C---------------CCCc-------cc---------CC--c---e--e--------------
Q 022278 195 ----------------K---------------QPLL-------ET---------PG--E---V--F-------------- 206 (300)
Q Consensus 195 ----------------d---------------~~~~-------~~---------~g--~---~--~-------------- 206 (300)
+ .|.. +. .| + . +
T Consensus 221 aF~v~~~~v~kL~~~~~~~G~Iv~~~~~l~~~~P~~~~~e~~~~~~~~~~~~~~~g~~e~~~~~~l~~n~~~~~~~~~~~ 300 (459)
T 2e9q_A 221 AFQIDGGLVRKLKGEDDERDRIVQVDEDFEVLLPEKDEEERSRGRYIESESESENGLEETICTLRLKQNIGRSERADVFN 300 (459)
T ss_dssp HHTCCHHHHHHHHTTTCCSTTEEECCSSCCTTTTC------------------------CGGGSCCEEECSTTSCCSEEE
T ss_pred hcCCCHHHHHhhhhcccCCccEEEeCCcccccCCccchhhhcccccccccccccCCccccccceeeeecccccccCCccc
Confidence 0 0000 00 01 0 0 0
Q ss_pred ----EEEEeeCCCCC--c--ceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCC----EEEE--ccCCcEEEe
Q 022278 207 ----QLRKLLPQAVP--F--DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGD----SWYP--VQAGDVLWM 271 (300)
Q Consensus 207 ----~~~~l~p~~~~--~--~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g----~~~~--v~~GD~i~~ 271 (300)
.++.+.+.+.. . ++.+..+.|+||+..+. |.|... |.+||++|+|.+.+-+ +.+. |++||++++
T Consensus 301 ~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~p-H~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~ 379 (459)
T 2e9q_A 301 PRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAP-HYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMI 379 (459)
T ss_dssp TTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEE
T ss_pred CCCeeEEEeccccCccccccccceEEEEeeCCcCccc-eECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEE
Confidence 11222222221 2 68889999999999985 777755 8899999999999865 5554 999999999
Q ss_pred CCCCceeEEecCCccEEEEEEeec
Q 022278 272 APFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
|.|.+|...| |+++++||++++-
T Consensus 380 P~G~~H~~~n-g~~~~~~l~~~~s 402 (459)
T 2e9q_A 380 PQNFVVIKRA-SDRGFEWIAFKTN 402 (459)
T ss_dssp CTTCEEEEEE-EEEEEEEEEEESS
T ss_pred CCCCEEEEEe-CCCCeEEEEEecC
Confidence 9999999999 8999999999753
No 24
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.68 E-value=2.7e-16 Score=129.07 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=95.6
Q ss_pred ceeeccCCCCCCcccC--C-ceeEEEEeeC-CCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEE--eCCEE
Q 022278 187 EQIVGSTDKQPLLETP--G-EVFQLRKLLP-QAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSW 260 (300)
Q Consensus 187 ~~~~~~~~d~~~~~~~--g-~~~~~~~l~p-~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~--~~g~~ 260 (300)
.+.+.+++|+++.+.+ + .++..++|+. .+....+.+..++++||+.++. |.|..++.+|||+|++.+. ++|++
T Consensus 2 ~m~v~~~~~v~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~ 80 (145)
T 3ht1_A 2 MMKRVHRTDVKAEIVREPGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPP-HFHEWEHEIYVLEGSMGLVLPDQGRT 80 (145)
T ss_dssp CCCCCCGGGSCCEECCSTTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCC-EECSSCEEEEEEEECEEEEEGGGTEE
T ss_pred cceEeehhhCCHhHcCCCCCCCcEEEEEEccCCCCCcEEEEEEEECCCCcCCC-ccCCCceEEEEEEeEEEEEEeECCEE
Confidence 4678899999999985 4 6677888875 4445688999999999999996 7888888899999999999 99999
Q ss_pred EEccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 261 YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 261 ~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
+.+++||++++++|++|++.|.|+++++|++.-.-+
T Consensus 81 ~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 81 EEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp EEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred EEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 999999999999999999999999999999876443
No 25
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.68 E-value=1.6e-15 Score=150.40 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=64.8
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCC----EEE--EccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD----SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g----~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
++.+..++|+||+..+. |.|.. .+.+|||+|++.+.+.+ +.+ .|++||++++|+|.+|++.| |+++++|++
T Consensus 371 ~is~a~v~L~PG~~~~p-H~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~ 448 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVP-HYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVA 448 (510)
T ss_dssp TCEEEEEEEETTCEEEE-EEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEE
T ss_pred eEEEEEEEecCCceecc-eECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEE
Confidence 67889999999999986 77774 58899999999998754 444 49999999999999999999 899999999
Q ss_pred Ee
Q 022278 292 YK 293 (300)
Q Consensus 292 ~k 293 (300)
+.
T Consensus 449 f~ 450 (510)
T 3c3v_A 449 FK 450 (510)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 26
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.68 E-value=4e-16 Score=133.80 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=94.8
Q ss_pred eeeccCCCCCCcccCC------ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEE
Q 022278 188 QIVGSTDKQPLLETPG------EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWY 261 (300)
Q Consensus 188 ~~~~~~~d~~~~~~~g------~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~ 261 (300)
.-.-+|++++...++. .++..|.|+..+. ..+.+++++++||+.++. |.|.++|.+||++|++.+.+||+++
T Consensus 16 ~~~~~w~~v~~~~~~~~~~~p~~gv~~r~L~~~~~-~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~~~v~g~~~ 93 (166)
T 3jzv_A 16 QSQYRWPGVDLLAYKEEGSAPFRSVTRQVLFSGNG-LTGELRYFEVGPGGHSTL-ERHQHAHGVMILKGRGHAMVGRAVS 93 (166)
T ss_dssp CCCCCCTTSCEEECCCC-CCSCEEEEEEEEECCTT-CSEEEEEEEEEEEEECCC-BBCSSCEEEEEEEECEEEEETTEEE
T ss_pred cCCcCcccChhhhcccCCCcccCCeEEEEEECCCC-CeEEEEEEEECCCCccCc-eeCCCcEEEEEEeCEEEEEECCEEE
Confidence 3445788888877653 3567888886553 678889999999999997 6888899999999999999999999
Q ss_pred EccCCcEEEeCCCCceeEEecCCccEEEEEEeecCCC
Q 022278 262 PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNRN 298 (300)
Q Consensus 262 ~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr~ 298 (300)
.+++||++|++++++|++.|.|+++++||+.-...||
T Consensus 94 ~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~~d 130 (166)
T 3jzv_A 94 AVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAERD 130 (166)
T ss_dssp EECTTCEEEECTTCCEEEECCTTSCEEEEEEEESSCC
T ss_pred EeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCCC
Confidence 9999999999999999999999999999998887766
No 27
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.67 E-value=2.3e-15 Score=149.07 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=63.8
Q ss_pred eEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCCE----E--EEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDS----W--YPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g~----~--~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+.+..++|+||+.++. |.|.+ .+.+|||+|++.+.+.+. . ..|++||++++|+|.+|+..| ++++++||++
T Consensus 367 ls~a~v~l~pG~~~~p-H~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~ 444 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSP-HWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVF 444 (493)
T ss_dssp CEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEE
T ss_pred eEEEEEEccCCceeee-eECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEE
Confidence 8899999999999986 78875 488999999999987653 3 459999999999999999998 5699999999
Q ss_pred ee
Q 022278 293 KD 294 (300)
Q Consensus 293 kd 294 (300)
.+
T Consensus 445 ~t 446 (493)
T 2d5f_A 445 KT 446 (493)
T ss_dssp ES
T ss_pred EC
Confidence 74
No 28
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.66 E-value=1.9e-15 Score=129.41 Aligned_cols=106 Identities=18% Similarity=0.279 Sum_probs=88.8
Q ss_pred cCCCCCCcccCC-----ceeEEEEeeCCCC---CcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEc
Q 022278 192 STDKQPLLETPG-----EVFQLRKLLPQAV---PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV 263 (300)
Q Consensus 192 ~~~d~~~~~~~g-----~~~~~~~l~p~~~---~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v 263 (300)
.|++++...++. .++..++|+..+. ...+.++.++++||+.++. |.|..+|.+|||+|++.+.+||+++.+
T Consensus 20 ~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~-H~H~~~E~~~Vl~G~~~~~i~~~~~~l 98 (167)
T 3ibm_A 20 RWEGTEEEAYKAEGTHFSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTL-ERHEHTHVVMVVRGHAEVVLDDRVEPL 98 (167)
T ss_dssp EETTCCCC---------CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCC-BBCSSCEEEEEEESEEEEEETTEEEEE
T ss_pred ccccceeeeccCCCCcCCCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCC-ccCCCcEEEEEEeCEEEEEECCEEEEE
Confidence 355555544432 3567888886544 4578999999999999997 678899999999999999999999999
Q ss_pred cCCcEEEeCCCCceeEEecC-CccEEEEEEeecCCC
Q 022278 264 QAGDVLWMAPFVPQWYAALG-KTRTRYLLYKDVNRN 298 (300)
Q Consensus 264 ~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~kd~nr~ 298 (300)
++||++|++++++|++.|.| +++++||+.-+-.||
T Consensus 99 ~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~d 134 (167)
T 3ibm_A 99 TPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSDRD 134 (167)
T ss_dssp CTTCEEEECTTCCEEEEEESSSCCEEEEEEEESSCC
T ss_pred CCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCCcC
Confidence 99999999999999999999 999999999887776
No 29
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.64 E-value=2.6e-15 Score=126.98 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=93.3
Q ss_pred CcceeeccCCCCCCcccCCceeEEEEee-CC-CCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC----
Q 022278 185 ITEQIVGSTDKQPLLETPGEVFQLRKLL-PQ-AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD---- 258 (300)
Q Consensus 185 ~p~~~~~~~~d~~~~~~~g~~~~~~~l~-p~-~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g---- 258 (300)
.+.+++.+++++|+..+...++..+.++ +. .....+.+..++++||+.++. |.|..+|.+||++|++.+.++|
T Consensus 4 ~~~~~v~~~~~~~~~~~~~~G~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~-H~H~~~E~~~Vl~G~~~~~~~~~~~~ 82 (163)
T 1lr5_A 4 RDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPI-HRHSCEEVFTVLKGKGTLLMGSSSLK 82 (163)
T ss_dssp CCCCSEEEGGGSCCBCTTCTTEEEEEEECHHHHCCSSEEEEEEEECTTCBCCE-EEESSCEEEEEEECCEEEEECCSSSS
T ss_pred CCccEecChHHCChhhccCCCcceEEEeccccCCCCcEEEEEEEECCCCcCCC-eECCCCeEEEEEeCEEEEEECCcccc
Confidence 4678999999999999743334555554 43 334578899999999999986 7888889999999999999999
Q ss_pred -----EEEEccCCcEEEeCCCCceeEEecC-CccEEEEEEee
Q 022278 259 -----SWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYKD 294 (300)
Q Consensus 259 -----~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~kd 294 (300)
+++.+++||++|+++|++|++.|.| +++++|++.-.
T Consensus 83 ~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~ 124 (163)
T 1lr5_A 83 YPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIIS 124 (163)
T ss_dssp SCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEE
T ss_pred ccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEEC
Confidence 9999999999999999999999999 99999998754
No 30
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.63 E-value=9e-16 Score=131.72 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=67.0
Q ss_pred CcEEEEEEEEcC-CCcCCC-CCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEe
Q 022278 102 SHFVMYLANMQE-NARSAL-PPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFER 176 (300)
Q Consensus 102 ~~f~~~lv~l~P-G~~~~~-~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~ 176 (300)
..|++.+++++| |+.... +.|.+|||+|||+|++++++ +|++|.|++||++|||++.+|+|+| +++||++|+.-
T Consensus 86 ~~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl-~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq~ 163 (166)
T 2vpv_A 86 EYFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTV-CKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQV 163 (166)
T ss_dssp CSCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred ccceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEE-CCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEEEE
Confidence 478999999999 665544 48999999999999999999 9999999999999999999999999 78899999953
No 31
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.62 E-value=1.7e-13 Score=123.87 Aligned_cols=174 Identities=17% Similarity=0.161 Sum_probs=122.7
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeecccc
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASL 181 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~ 181 (300)
..|..-.+.+ .|... ....+.+|++|||+|+++|+. +|+.+++++||+++||.|..|+|+..+++|.+++...-.+.
T Consensus 45 ~~~~~G~~~~-~g~~~-v~~~p~dE~~~VleG~~~lt~-~g~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~~~~~ 121 (238)
T 3myx_A 45 QGIAAGIVEF-GTALS-VEAYPYTEMLVMHRGSVTLTS-GTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCASTQASG 121 (238)
T ss_dssp TSEEEEEEEE-CSEEE-ESSCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCCEEEEECTTEEEEEEEECSCCS
T ss_pred CCeEEEEEEe-ccccc-cccCCCcEEEEEEEeEEEEEC-CCeEEEEcCCCEEEECCCCEEEEEecCCeEEEEEeccCCCC
Confidence 4677777777 55333 224567999999999999998 99999999999999999999999998888888874331022
Q ss_pred CCCCcceeeccCCCCCCcc---------cCC-ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEee
Q 022278 182 ENHITEQIVGSTDKQPLLE---------TPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQ 251 (300)
Q Consensus 182 ~g~~p~~~~~~~~d~~~~~---------~~g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~ 251 (300)
++ .+. ++.--.+.+..+ +.| -....+.+...+ ...+..-+..-+||..+++ ++...|..|||+|+
T Consensus 122 p~-~~~-~~~i~~~~~l~P~~~p~p~~~l~G~P~~~~~~~~~~~-~g~~~~GiW~~tpG~~~~~--~~~~~E~~~ILeG~ 196 (238)
T 3myx_A 122 PD-KSG-ITALDRLALLTPSSPPDPSIMISPLPQCRSNNLFEDT-ASTLRIGVWDSTPYERISR--PHKIHELMNLIEGR 196 (238)
T ss_dssp CC-CCS-EEEECTTCCCEEECCCCGGGBSSCCCCEEEEEEEECS-SSSCEEEEEEECCEEBCCE--ECSSCEEEEEEECC
T ss_pred CC-CCc-cEEecCCCCCCCCCCCChhheecCCchheeeEEEECC-CCCEEEeEEEeCCCEEECC--cCCCCEEEEEEEeE
Confidence 22 122 222222222222 344 222333343322 2345566888899987653 44556799999999
Q ss_pred EEEEe-CCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 252 GIYRL-GDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 252 G~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
.+++. +|+.+.++|||.+++|+|..-...-..
T Consensus 197 v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 197 VVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp EEEEETTSCEEEECTTCEEEECTTCEEEEEESS
T ss_pred EEEEeCCCCEEEECCCCEEEECCCCEEEEEECc
Confidence 99997 678899999999999999887776653
No 32
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=99.60 E-value=6.3e-14 Score=125.61 Aligned_cols=201 Identities=16% Similarity=0.178 Sum_probs=140.7
Q ss_pred eeEeCCCCeeeccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccC
Q 022278 71 HALITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVD 150 (300)
Q Consensus 71 ~av~~~e~~~~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~G 150 (300)
++++..++..+...+. .+.....|............++.++||+..+.|.|.+.|.+|||+|+.+ . + .-.+.+|
T Consensus 11 ~v~i~~~~~~W~~~~~-~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g~Ee~~VL~G~f~--d-~--~~~~~~G 84 (223)
T 3o14_A 11 PVVIDTDQLEWRPSPM-KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDGGEEFIVLDGVFQ--D-E--HGDYPAG 84 (223)
T ss_dssp CEEEEGGGSCCEECSS-TTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTTCEEEEEEEEEEE--E-T--TEEEETT
T ss_pred eEEeeCccCCceeCCC-CCEEEEEeecCCCccccEEEEEEECCCCCcccccCCCCEEEEEEEeEEE--E-C--CeEECCC
Confidence 4455555554444332 3455556644332233456789999999989889999999999999976 3 3 3489999
Q ss_pred cEEEeCCCCceEEeeCCeEEEEEEEeeccccCCCCcceeeccCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCC
Q 022278 151 SYTYLPPNFAHSLRAEGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPG 230 (300)
Q Consensus 151 ds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG 230 (300)
|+++.|++..|....++.|.+++....+.+.+- +. + +.+..+|.+...+++....|-..+ .-.++...++||
T Consensus 85 d~~~~P~g~~H~p~a~~gc~~~vk~~~~~~~d~--~~--v-~~~~~~W~~~~~~Gv~~~~L~~~~---~E~v~l~r~~~G 156 (223)
T 3o14_A 85 TYVRNPPTTSHVPGSAEGCTIFVKLWQFDPADR--TQ--F-SKNMEAELGAPVEGISTSLLHEDE---RETVTHRKLEPG 156 (223)
T ss_dssp EEEEECTTCEECCEESSCEEEEEEESCSCTTCC--BC--E-EEETTTTCCCCBTTEEEEEEEECS---SCEEEEEEECTT
T ss_pred eEEEeCCCCccccEeCCCCEEEEEecCCCCCcc--cc--c-ccchhcccccCCCCeEEEEEecCC---CcEEEEEEECCC
Confidence 999999999999887777888888777765553 32 2 556666666422333433444333 235678899999
Q ss_pred cccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEe
Q 022278 231 DFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 293 (300)
Q Consensus 231 ~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 293 (300)
..++. |.| .-+++|||+|+ +.+++. ...+||.+..|++..|...+ |++.+. |+.|
T Consensus 157 ~~~~~-~~h-gG~EilVL~G~--~~d~~~--~~~~GsWlR~P~gs~h~~~a-g~~g~~-i~~k 211 (223)
T 3o14_A 157 ANLTS-EAA-GGIEVLVLDGD--VTVNDE--VLGRNAWLRLPEGEALSATA-GARGAK-IWMK 211 (223)
T ss_dssp CEEEE-CCS-SCEEEEEEEEE--EEETTE--EECTTEEEEECTTCCEEEEE-EEEEEE-EEEE
T ss_pred CccCC-CCC-CcEEEEEEEeE--EEECCc--eECCCeEEEeCCCCccCcEE-CCCCeE-EEEE
Confidence 99987 456 44457999998 557775 55799999999999999988 666555 4444
No 33
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.60 E-value=1.4e-14 Score=131.05 Aligned_cols=94 Identities=7% Similarity=0.110 Sum_probs=84.1
Q ss_pred CCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCC-CCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceE
Q 022278 84 LPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALP-PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHS 162 (300)
Q Consensus 84 ~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~-~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~ 162 (300)
.++-++...+++.++..+..|++.+++++||++.+.+ +|.+||++|||+|++++++ +|+++.|++||++|++++.+|.
T Consensus 145 ~~~~~g~~~r~l~p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~-~~~~~~l~~GD~~~~~~~~pH~ 223 (246)
T 1sfn_A 145 FEGDDHLIARKLLPDEPAFDFMVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL-EENYYPVTAGDIIWMGAHCPQW 223 (246)
T ss_dssp TTSCTTEEEEECSCCCTTCSEEEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE-TTEEEEEETTCEEEECTTCCEE
T ss_pred cCCCCCeEEEEeCCCccCCCeEEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE-CCEEEEcCCCCEEEECCCCCEE
Confidence 4555666777788777888999999999999998764 7999999999999999999 9999999999999999999999
Q ss_pred Eee--CCeEEEEEEEeec
Q 022278 163 LRA--EGSATLVVFERRY 178 (300)
Q Consensus 163 ~~N--~~~a~vl~v~~~y 178 (300)
++| ++++++|+++..-
T Consensus 224 ~~n~g~~~~~yl~~kd~~ 241 (246)
T 1sfn_A 224 YGALGRNWSKYLLYKDMN 241 (246)
T ss_dssp EEEESSSCEEEEEEEECS
T ss_pred EEcCCCCCEEEEEEEecc
Confidence 999 7899999997643
No 34
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.57 E-value=1.1e-14 Score=120.47 Aligned_cols=91 Identities=8% Similarity=0.068 Sum_probs=74.0
Q ss_pred eccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCc
Q 022278 81 LSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA 160 (300)
Q Consensus 81 ~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~ 160 (300)
....|... .....|.++..+ .|++.+++++|| ... .+|.++||+|||+|++++++ +|+++.|++||+++||++.+
T Consensus 36 ~~g~p~~~-~~~~~L~~~~~~-~~~~~~~~~~pG-~~~-~h~~~~E~~~VLeG~~~l~~-~g~~~~l~~GD~i~~p~g~~ 110 (133)
T 2pyt_A 36 DGAEPHCV-GLTDLVTEQDGS-SMAAGFMQWDNA-FFP-WTLNYDEIDMVLEGELHVRH-EGETMIAKAGDVMFIPKGSS 110 (133)
T ss_dssp GGGTTSCC-EEEEEECGGGTC-SSEEEEEEEEEE-EEE-EECSSEEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCE
T ss_pred cCCCCCce-EEEEEEecCCCC-cEEEEEEEECCC-Ccc-ccCCCCEEEEEEECEEEEEE-CCEEEEECCCcEEEECCCCE
Confidence 34455432 345556665444 899999999999 222 24678999999999999999 99999999999999999999
Q ss_pred eEEeeCCeEEEEEEEe
Q 022278 161 HSLRAEGSATLVVFER 176 (300)
Q Consensus 161 H~~~N~~~a~vl~v~~ 176 (300)
|.|+|+++++++|+..
T Consensus 111 h~~~~~~~~~~l~v~~ 126 (133)
T 2pyt_A 111 IEFGTPTSVRFLYVAW 126 (133)
T ss_dssp EEEEEEEEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEc
Confidence 9999988999999964
No 35
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.56 E-value=1.4e-14 Score=125.06 Aligned_cols=78 Identities=12% Similarity=0.145 Sum_probs=71.9
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcC-CcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeec
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRY 178 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g-g~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y 178 (300)
..+.+++++++||+.+..|.|.+|||+|||+|++++++ + |+++.|++||++ ||++.+|+|+| +++|+++|+..+.
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~l-d~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~ 154 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNSIDYGIVLEGEIELEL-DDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEA 154 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSEEEEEEEEESCEEEEC-GGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEEC
T ss_pred CCeEEEEEEECCCCCCCCeecCceEEEEEEeCEEEEEE-CCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCC
Confidence 46788899999999998899999999999999999999 7 899999999999 99999999999 6899999998877
Q ss_pred ccc
Q 022278 179 ASL 181 (300)
Q Consensus 179 ~~~ 181 (300)
.|+
T Consensus 155 ~p~ 157 (172)
T 3es1_A 155 PAY 157 (172)
T ss_dssp CCC
T ss_pred Cce
Confidence 664
No 36
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.53 E-value=4.7e-14 Score=115.65 Aligned_cols=88 Identities=20% Similarity=0.282 Sum_probs=76.1
Q ss_pred ceeEEEEee-CCCC-CcceEEEEEEecCCcccCcceeec-cceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEE
Q 022278 204 EVFQLRKLL-PQAV-PFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYA 280 (300)
Q Consensus 204 ~~~~~~~l~-p~~~-~~~~~~~~~tl~PG~~~p~~~~H~-~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~ 280 (300)
+++..+.++ |.+. +..+.+..++++||+.++. |.|. ++|.+|||+|++.+.+||+++.+++||+++++++++|++.
T Consensus 39 g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~~E~~~Vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~ 117 (133)
T 1o4t_A 39 GEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGL-HKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIE 117 (133)
T ss_dssp SEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEE-EECCSEEEEEEEEESEEEEEETTEEEEEETTEEEEECTTCEEEEE
T ss_pred CeEEEEEccChhhCCCceEEEEEEEECCCCccCc-eECCCccEEEEEEeCEEEEEECCEEEEeCCCcEEEECCCCcEEeE
Confidence 456666565 5544 4567788999999999986 6775 7899999999999999999999999999999999999999
Q ss_pred ecCCccEEEEEE
Q 022278 281 ALGKTRTRYLLY 292 (300)
Q Consensus 281 n~G~e~~~fi~~ 292 (300)
|.|+++++|++.
T Consensus 118 n~~~~~~~~l~v 129 (133)
T 1o4t_A 118 NTGNTDLEFLAV 129 (133)
T ss_dssp CCSSSCEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999999999864
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.53 E-value=2.6e-14 Score=110.80 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=67.8
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCce-EEEEEEECEEEEEEcCC--cEEEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 101 GSHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gE-Ef~yVLeG~v~l~v~gg--~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
+..++++.++++||+....|.|+++ |++||++|++++++ ++ +++.|++||++++|++.+|+++| +++++++++.
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~-~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v~ 93 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET-PEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEIE 93 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEE-TTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEe-CCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEEE
Confidence 4589999999999998888888885 69999999999999 77 79999999999999999999999 6789999885
Q ss_pred e
Q 022278 176 R 176 (300)
Q Consensus 176 ~ 176 (300)
-
T Consensus 94 ~ 94 (97)
T 2fqp_A 94 I 94 (97)
T ss_dssp E
T ss_pred E
Confidence 3
No 38
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.52 E-value=3.8e-14 Score=116.20 Aligned_cols=103 Identities=9% Similarity=0.156 Sum_probs=80.9
Q ss_pred eEeCCCCeeeccCC----CCCcceEEEEecCC-C-CCcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcE
Q 022278 72 ALITPESHVLSPLP----EWTNTLGAYLITPA-M-GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVS 144 (300)
Q Consensus 72 av~~~e~~~~~~~p----~~~~~~~~~L~sp~-~-g~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~ 144 (300)
.+++++++.....+ +..+...+.+++|. . ++.+++..++++||+..+.|.|. .+|++||++|++++++ ++++
T Consensus 19 ~v~r~~~~~~~~~~~~~~~~g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-~~~~ 97 (133)
T 1o4t_A 19 MVVRSSEITPERISNMRGGKGEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD-NGKD 97 (133)
T ss_dssp CEEEGGGSCCEEEESGGGCSSEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE-TTEE
T ss_pred EEEEhhhCCEEEecCccCCCCeEEEEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE-CCEE
Confidence 45555554433332 22223444477765 3 56788899999999887777787 5999999999999999 9999
Q ss_pred EEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 145 SKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 145 ~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
+.|++||++++|++.+|+++| +++++++|+.
T Consensus 98 ~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v~ 130 (133)
T 1o4t_A 98 VPIKAGDVCFTDSGESHSIENTGNTDLEFLAVI 130 (133)
T ss_dssp EEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred EEeCCCcEEEECCCCcEEeEECCCCCEEEEEEE
Confidence 999999999999999999998 5789999885
No 39
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.51 E-value=9.1e-14 Score=112.68 Aligned_cols=89 Identities=15% Similarity=0.224 Sum_probs=79.5
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
+++..+.|.+.+....+.+..++++||...+. |.|..++.+||++|++.+.++|+++.+++||++|++++++|++.|.|
T Consensus 32 ~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 32 RGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDR-HSHPWEHEIFVLKGKLTVLKEQGEETVEEGFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEEEEEECTTTCSSEEEEEEEEEEEEEEEE-ECCSSCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCEEEECCS
T ss_pred CCeEEEEEeCCCCCCCEEEEEEEECCCCcCCc-eeCCCcEEEEEEEeEEEEEECCEEEEECCCCEEEECCCCcEEeEeCC
Confidence 55677778765546678889999999999985 78888899999999999999999999999999999999999999999
Q ss_pred CccEEEEEEe
Q 022278 284 KTRTRYLLYK 293 (300)
Q Consensus 284 ~e~~~fi~~k 293 (300)
+++++|++.-
T Consensus 111 ~~~~~~l~v~ 120 (126)
T 1vj2_A 111 DSEVEFLCLI 120 (126)
T ss_dssp SSCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999998764
No 40
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.51 E-value=1.2e-13 Score=117.21 Aligned_cols=88 Identities=14% Similarity=0.173 Sum_probs=79.5
Q ss_pred CCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-
Q 022278 87 WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 165 (300)
Q Consensus 87 ~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N- 165 (300)
+.+...++|+++.. ..|++.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|+++|
T Consensus 28 ~~g~~~~~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v-~g~~~~l~~Gd~i~ip~~~~H~~~n~ 105 (156)
T 3kgz_A 28 FQDVSRQLLFADPN-LACEWRYFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV-GETISDVAQGDLVFIPPMTWHQFRAN 105 (156)
T ss_dssp SEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCCEEEECC
T ss_pred cCCeEEEEEEcCCC-CcEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeC
Confidence 34577888888764 78999999999999988888999999999999999999 9999999999999999999999998
Q ss_pred -CCeEEEEEEEe
Q 022278 166 -EGSATLVVFER 176 (300)
Q Consensus 166 -~~~a~vl~v~~ 176 (300)
+++++++++..
T Consensus 106 g~~~~~~l~i~~ 117 (156)
T 3kgz_A 106 RGDCLGFLCVVN 117 (156)
T ss_dssp SSSCEEEEEEEE
T ss_pred CCCCEEEEEEEe
Confidence 67899998854
No 41
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.51 E-value=9.9e-14 Score=112.47 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=81.5
Q ss_pred CCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEE
Q 022278 84 LPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSL 163 (300)
Q Consensus 84 ~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~ 163 (300)
.++..+...++|+++..+..|+++.++++||+..+.|.|+.+|++||++|++++.+ +++++.|++||++++|++.+|++
T Consensus 28 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~g~~H~~ 106 (126)
T 1vj2_A 28 TDKVRGVRKRVLIGLKDAPNFVMRLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK-EQGEETVEEGFYIFVEPNEIHGF 106 (126)
T ss_dssp SSSEEEEEEEEEECTTTCSSEEEEEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC-SSCEEEEETTEEEEECTTCCEEE
T ss_pred CCCCCCeEEEEEeCCCCCCCEEEEEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE-CCEEEEECCCCEEEECCCCcEEe
Confidence 45556678888888877889999999999998887788999999999999999999 99999999999999999999999
Q ss_pred ee--CCeEEEEEEE
Q 022278 164 RA--EGSATLVVFE 175 (300)
Q Consensus 164 ~N--~~~a~vl~v~ 175 (300)
+| +++++++++.
T Consensus 107 ~~~~~~~~~~l~v~ 120 (126)
T 1vj2_A 107 RNDTDSEVEFLCLI 120 (126)
T ss_dssp ECCSSSCEEEEEEE
T ss_pred EeCCCCCEEEEEEE
Confidence 98 5688988884
No 42
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.50 E-value=5.1e-14 Score=109.08 Aligned_cols=74 Identities=11% Similarity=-0.012 Sum_probs=67.2
Q ss_pred cceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCC--EEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
..+.+..++++||+.++. |+|..+ +.+|||+|++.+.++| +.+.+++||.+|++++.+|++.|.|+++++||+.
T Consensus 16 ~~~~~~~~~~~Pg~~~~~-H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGW-HRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SSEEEEEEEECTTCBCCS-EECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CeEEEEEEEECCCCCCCC-EECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 356788999999999996 677775 5999999999999998 8999999999999999999999999999999874
No 43
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.50 E-value=4.6e-13 Score=114.45 Aligned_cols=89 Identities=16% Similarity=0.252 Sum_probs=79.6
Q ss_pred CCcceEEEEecCCCC---CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEE
Q 022278 87 WTNTLGAYLITPAMG---SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSL 163 (300)
Q Consensus 87 ~~~~~~~~L~sp~~g---~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~ 163 (300)
+.+....+|+++..| ..|++.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|.+
T Consensus 36 ~~g~~~~~L~~~~~g~~~~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~~~~H~~ 114 (167)
T 3ibm_A 36 FSGARRQTLVGRPAGQEAPAFETRYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL-DDRVEPLTPLDCVYIAPHAWHQI 114 (167)
T ss_dssp -CCEEEEEEECTTTTCCSSSEEEEEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE-TTEEEEECTTCEEEECTTCCEEE
T ss_pred CCCcEEEEEECCCCCCCCCcEEEEEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCcEEE
Confidence 356788889998873 58999999999999988888999999999999999999 99999999999999999999999
Q ss_pred ee---CCeEEEEEEEe
Q 022278 164 RA---EGSATLVVFER 176 (300)
Q Consensus 164 ~N---~~~a~vl~v~~ 176 (300)
+| +++++++++..
T Consensus 115 ~n~~~~~~~~~l~i~~ 130 (167)
T 3ibm_A 115 HATGANEPLGFLCIVD 130 (167)
T ss_dssp EEESSSCCEEEEEEEE
T ss_pred EeCCCCCCEEEEEEEe
Confidence 98 35789888854
No 44
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.49 E-value=1e-13 Score=112.39 Aligned_cols=84 Identities=13% Similarity=0.176 Sum_probs=69.3
Q ss_pred EEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-CCeEE
Q 022278 92 GAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSAT 170 (300)
Q Consensus 92 ~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~~~a~ 170 (300)
+..+.+...++.+...+++++||+....|. +.+|++|||+|++++++ +|+++.|++||++++|++.+|+|+| +++++
T Consensus 28 ~g~v~s~~~~~~~~~~~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~~-~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~ 105 (119)
T 3lwc_A 28 VGNLVDERHGGPITIGYGRYAPGQSLTETM-AVDDVMIVLEGRLSVST-DGETVTAGPGEIVYMPKGETVTIRSHEEGAL 105 (119)
T ss_dssp EEEC------CCCEEEEEEECTTCEEEEEC-SSEEEEEEEEEEEEEEE-TTEEEEECTTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeecCCCCCCEEEEEEEECCCCCcCccC-CCCEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCEEEEEcCCCCeE
Confidence 334445556678999999999998776664 88999999999999999 9999999999999999999999998 48899
Q ss_pred EEEEEee
Q 022278 171 LVVFERR 177 (300)
Q Consensus 171 vl~v~~~ 177 (300)
++|+..+
T Consensus 106 ~l~v~~P 112 (119)
T 3lwc_A 106 TAYVTYP 112 (119)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9998654
No 45
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.49 E-value=1.2e-13 Score=110.95 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=66.3
Q ss_pred ceEEEEEEecCCcccCcceeec-cceEEEEEEeeEEEEe-CCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEe
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRL-GDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYK 293 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~-~eh~~~iL~G~G~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~k 293 (300)
++.+.+++++||+.++. |.|. .++.+|||+|++.+.+ ||+++.+++||+++++++++|++.|.|+++++||+.-
T Consensus 38 ~~~~~~~~~~pg~~~~~-H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIAS-HVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECC-C-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCc-ccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 35677899999999997 5666 5788999999999999 9999999999999999999999999999999999753
No 46
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.49 E-value=3.2e-13 Score=117.00 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=78.6
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCc--ceeeccceEEEEEEeeEEEEeCC----EEEEccCCcEEEeCCCCce
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNV--KEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQ 277 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~--~~~H~~eh~~~iL~G~G~~~~~g----~~~~v~~GD~i~~~~~~~H 277 (300)
+++..+.|.+...+..+.+..++++||+..+. +|+|..+|.+|||+|++.+.++| +++.+++||+++++++++|
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H 180 (198)
T 2bnm_A 101 DYYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPH 180 (198)
T ss_dssp TTEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCE
T ss_pred CceEEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCce
Confidence 45566667776666778888999999999885 57787789999999999999999 9999999999999999999
Q ss_pred eEEec-CCccEEEEEE
Q 022278 278 WYAAL-GKTRTRYLLY 292 (300)
Q Consensus 278 ~~~n~-G~e~~~fi~~ 292 (300)
++.|. |++++++++.
T Consensus 181 ~~~n~~~~~~~~~l~v 196 (198)
T 2bnm_A 181 AFTAAKGTGSAKLIAV 196 (198)
T ss_dssp EEEESTTSCCEEEEEE
T ss_pred EEEecCCCCCeEEEEE
Confidence 99999 9999999874
No 47
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.48 E-value=2.4e-13 Score=113.51 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=83.2
Q ss_pred CCCCCCcccCCceeEEEEeeCCCC-CcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEE-EEccCCcEEE
Q 022278 193 TDKQPLLETPGEVFQLRKLLPQAV-PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW-YPVQAGDVLW 270 (300)
Q Consensus 193 ~~d~~~~~~~g~~~~~~~l~p~~~-~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~-~~v~~GD~i~ 270 (300)
.++.|+..+.| ++.++.|.+.+. ...+.+..++++||..++. |.|..++.+||++|++.+.++|+. +.+++||++|
T Consensus 21 ~~~~~~~~~~g-~~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~i~ 98 (147)
T 2f4p_A 21 GSKGSSDFFTG-NVWVKMLVTDENGVFNTQVYDVVFEPGARTHW-HSHPGGQILIVTRGKGFYQERGKPARILKKGDVVE 98 (147)
T ss_dssp CEECCTTTEES-CEEEEEEECCTTCSSSCEEEEEEECTTCEECS-EECTTCEEEEEEEEEEEEEETTSCCEEEETTCEEE
T ss_pred ccCCCcCEEEC-cEEEEEEECCCCCCCcEEEEEEEECCCCccCc-eECCCceEEEEEeCEEEEEECCEEEEEECCCCEEE
Confidence 33444444444 457777777654 5678888999999999986 788889999999999999999998 9999999999
Q ss_pred eCCCCceeEEecCCccEEEEEEe
Q 022278 271 MAPFVPQWYAALGKTRTRYLLYK 293 (300)
Q Consensus 271 ~~~~~~H~~~n~G~e~~~fi~~k 293 (300)
++++++|++.|.|++++++++.-
T Consensus 99 ip~~~~H~~~n~~~~~~~~l~v~ 121 (147)
T 2f4p_A 99 IPPNVVHWHGAAPDEELVHIGIS 121 (147)
T ss_dssp ECTTCCEEEEEBTTBCEEEEEEE
T ss_pred ECCCCcEEeEeCCCCCEEEEEEE
Confidence 99999999999999999998764
No 48
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.48 E-value=2.3e-12 Score=126.49 Aligned_cols=192 Identities=10% Similarity=0.088 Sum_probs=134.4
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc-C--Cc-----------------------------------
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-S--GV----------------------------------- 143 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~-g--g~----------------------------------- 143 (300)
..+.+..+++.||+-..+|.|+..+++||++|++.+.+. . -+
T Consensus 41 ~gvs~~r~~i~p~Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (466)
T 3kgl_A 41 SGVSFVRYIIESKGLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQG 120 (466)
T ss_dssp HTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-----------------------
T ss_pred CCeEEEEEEECCCCEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccccccccccccc
Confidence 578889999999998888878899999999999988652 1 12
Q ss_pred -------------------------EEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeecccc---CCC-Ccceeecc
Q 022278 144 -------------------------SSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASL---ENH-ITEQIVGS 192 (300)
Q Consensus 144 -------------------------~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y~~~---~g~-~p~~~~~~ 192 (300)
.+.|++||.+++|+|.+|++.| +++++++++.....+. ++. ..-.+.|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n~~nQld~~~~~F~LaG~ 200 (466)
T 3kgl_A 121 QGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGN 200 (466)
T ss_dssp ------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSSTTCCSCSSCCEEESSCC
T ss_pred ccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCCcccccCCceeeeEecCC
Confidence 2489999999999999999999 5788888887654331 110 00011111
Q ss_pred CC---------------C---------------C--------CCcc----------------------------cCC---
Q 022278 193 TD---------------K---------------Q--------PLLE----------------------------TPG--- 203 (300)
Q Consensus 193 ~~---------------d---------------~--------~~~~----------------------------~~g--- 203 (300)
-+ + + ...+ .+|
T Consensus 201 ~~~~~~~~~~~~~~~~~ni~sGF~~e~La~Af~v~~e~~~kL~~~q~~~G~Iv~v~~~l~~~~p~~~~~~~~~~~~glee 280 (466)
T 3kgl_A 201 NPQGQVWIEGREQQPQKNILNGFTPEVLAKAFKIDVRTAQQLQNQQDNRGNIIRVQGPFSVIRPPLRSQRPQEEVNGLEE 280 (466)
T ss_dssp BTTCCTTSTTCTTCCBCCGGGGSCHHHHHHHHTSCHHHHHHHTCTTCCSCSEEECCSCCCCCCCCC--------------
T ss_pred CccccccccccccccCCCccccCCHHHHHHHhCCCHHHHHHHhccccCceeEEEecCcccccCCcccccccccccCCccc
Confidence 10 0 0 0000 000
Q ss_pred -----------------------ceeEEEEeeCCCCC--c--ceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEE
Q 022278 204 -----------------------EVFQLRKLLPQAVP--F--DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYR 255 (300)
Q Consensus 204 -----------------------~~~~~~~l~p~~~~--~--~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~ 255 (300)
++ .++.+.+.+.. . ++.+..+.|+||+..+. |.|+.. +..||++|++.+.
T Consensus 281 ~~c~~r~~~Ni~~p~~~d~~~~~gG-~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~ 358 (466)
T 3kgl_A 281 TICSARCTDNLDDPSNADVYKPQLG-YISTLNSYDLPILRFLRLSALRGSIRQNAMVLP-QWNANANAVLYVTDGEAHVQ 358 (466)
T ss_dssp CCSSCCCEEETTCGGGEEEEETTTE-EEEEECTTTCTTHHHHTCEEEEEEEETTEEEEE-EEESSCCEEEEEEESEEEEE
T ss_pred cccceeccccccCcccCCcccCCCc-eEEEechhhCcccccCceeeEEEEeecCcEeee-eECCCCCEEEEEEeceEEEE
Confidence 00 11112222221 2 68899999999999986 788665 7899999999876
Q ss_pred e---CC-EEE--EccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 256 L---GD-SWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 256 ~---~g-~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
+ +| +.+ .|++||+.++|.|.+|.. |.|+++++||.+++--
T Consensus 359 ~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~ 404 (466)
T 3kgl_A 359 VVNDNGDRVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNA 404 (466)
T ss_dssp EECTTSCEEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSS
T ss_pred EEeCCCcEEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCC
Confidence 4 23 334 599999999999999976 8899999999998643
No 49
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.48 E-value=2.4e-12 Score=126.29 Aligned_cols=192 Identities=10% Similarity=0.110 Sum_probs=130.9
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc-C--Cc-----------------------------------
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA-S--GV----------------------------------- 143 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~-g--g~----------------------------------- 143 (300)
+.+....++|+||+-..+|.|...|.+||++|+..+.+. . .+
T Consensus 48 ~gvs~~R~~i~P~gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 127 (465)
T 3qac_A 48 AGVSVIRRTIEPHGLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQ 127 (465)
T ss_dssp HTCEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCC
T ss_pred cceEEEEEEEcCCcCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccccccccccccc
Confidence 478889999999998888878999999999999988751 2 23
Q ss_pred ---EEEeccCcEEEeCCCCceEEee--CCeEEEEEEEeecccc-------------CC-CCc------------------
Q 022278 144 ---SSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRYASL-------------EN-HIT------------------ 186 (300)
Q Consensus 144 ---~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y~~~-------------~g-~~p------------------ 186 (300)
.+.+++||.+++|+|..|.+.| ++++.++.+...-.+. .| ..|
T Consensus 128 hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~ 207 (465)
T 3qac_A 128 HQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKPQQEHSGEHQFSRESRRGERN 207 (465)
T ss_dssp CCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCCCCSCC--------------C
T ss_pred ccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCCcccccccccccccccccccc
Confidence 3489999999999999999999 6788888775543221 11 011
Q ss_pred -ceeec-----------cCC-----------C-------------C--CCcc---------------cCC-c----ee--
Q 022278 187 -EQIVG-----------STD-----------K-------------Q--PLLE---------------TPG-E----VF-- 206 (300)
Q Consensus 187 -~~~~~-----------~~~-----------d-------------~--~~~~---------------~~g-~----~~-- 206 (300)
.-+++ +++ | + |... .+| + ..
T Consensus 208 ~~ni~sgF~~e~La~Af~v~~~~~~kl~~~q~~rG~Ivrv~~~l~~~~p~~~~~~~~~~~~~~~~~~~nglee~~c~~~l 287 (465)
T 3qac_A 208 TGNIFRGFETRLLAESFGVSEEIAQKLQAEQDDRGNIVRVQEGLHVIKPPSRAWEEREQGSRGSRYLPNGVEETICSARL 287 (465)
T ss_dssp CCCGGGGSCHHHHHHHHTCCHHHHHHHHTTTCCSCSEEEC-CCCC----------------------------CTTTSCC
T ss_pred ccchhhcCCHHHHHHHhCCCHHHHHHhhhccccceeEEEecCcccccCCcccchhhhhcccccccccCCCccccccceec
Confidence 00000 000 0 0 0000 001 0 00
Q ss_pred ------------------EEEEeeCCCCC----cceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEe---CC-E
Q 022278 207 ------------------QLRKLLPQAVP----FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL---GD-S 259 (300)
Q Consensus 207 ------------------~~~~l~p~~~~----~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~---~g-~ 259 (300)
.+..+.+.+.. -++.+.++.|+||+..+. |.|+.. +..||++|+|.+.+ +| +
T Consensus 288 ~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~P-HwHp~A~Ei~yV~~G~~~v~vV~~~g~~ 366 (465)
T 3qac_A 288 AVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAP-HYNLNAHNIMYCVRGRGRIQIVNDQGQS 366 (465)
T ss_dssp EEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred cccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeee-EECCCCCEEEEEEeCCEEEEEEeCCCcE
Confidence 11112222211 136889999999999986 788766 78899999998763 23 3
Q ss_pred EE--EccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 260 WY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 260 ~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
.+ .+++||+.++|.|.+|... .|+++++||.+++-
T Consensus 367 ~f~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s 403 (465)
T 3qac_A 367 VFDEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTS 403 (465)
T ss_dssp EEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESS
T ss_pred EEEEEecCCeEEEECCCcEEEEE-cCCCCeEEEEEecC
Confidence 44 4999999999999999875 68999999999853
No 50
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.48 E-value=1.1e-13 Score=113.37 Aligned_cols=93 Identities=20% Similarity=0.275 Sum_probs=82.4
Q ss_pred CCCCcceEEEEecCCCC-CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEE--EcCCcEEEeccCcEEEeCCCCce
Q 022278 85 PEWTNTLGAYLITPAMG-SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLT--NASGVSSKLMVDSYTYLPPNFAH 161 (300)
Q Consensus 85 p~~~~~~~~~L~sp~~g-~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~--v~gg~~~~L~~Gds~yfpa~~~H 161 (300)
++..+...++++++..+ ..|.+..++++||+..+.|.|+.+|++||++|++++. + +|+++.|++||++++|++.+|
T Consensus 19 ~~~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~-~~~~~~l~~Gd~~~ip~~~~H 97 (145)
T 3ht1_A 19 PGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPPHFHEWEHEIYVLEGSMGLVLPD-QGRTEEVGPGEAIFIPRGEPH 97 (145)
T ss_dssp TTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCCEECSSCEEEEEEEECEEEEEGG-GTEEEEECTTCEEEECTTCCB
T ss_pred CCCCCcEEEEEEccCCCCCcEEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEEeE-CCEEEEECCCCEEEECCCCeE
Confidence 45566788889988766 5899999999999998888899999999999999999 9 999999999999999999999
Q ss_pred EEee--CCeEEEEEEEeec
Q 022278 162 SLRA--EGSATLVVFERRY 178 (300)
Q Consensus 162 ~~~N--~~~a~vl~v~~~y 178 (300)
+++| +++++++++..+-
T Consensus 98 ~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 98 GFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp EEECCTTCCEEEEEEEESC
T ss_pred EeEcCCCCCEEEEEEECCC
Confidence 9999 6788988886443
No 51
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.48 E-value=3.6e-13 Score=114.53 Aligned_cols=89 Identities=12% Similarity=0.165 Sum_probs=76.4
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCC--CceeEEecC
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPF--VPQWYAALG 283 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~--~~H~~~n~G 283 (300)
..+.|.+......+.+.+++++||+.....|.|.. +|.+|||+|++.+.++|+++.+++||+++++++ ++|++.|.|
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~ 109 (163)
T 3i7d_A 30 SSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRT 109 (163)
T ss_dssp EEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTCCCCBEEECCS
T ss_pred EEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEECCEEEEeCCCCEEEECCCCCcceEEEECC
Confidence 44445565556688999999999997743467766 699999999999999999999999999999999 999999999
Q ss_pred CccEEEEEEeec
Q 022278 284 KTRTRYLLYKDV 295 (300)
Q Consensus 284 ~e~~~fi~~kd~ 295 (300)
+++++||+...-
T Consensus 110 ~~~~~~l~v~~p 121 (163)
T 3i7d_A 110 DAPATFLVVGTR 121 (163)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEEEECC
Confidence 999999987643
No 52
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.47 E-value=3.1e-13 Score=113.83 Aligned_cols=82 Identities=18% Similarity=0.356 Sum_probs=71.6
Q ss_pred CCCCCcceEEEEEEecCCc-ccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCC-CceeEEecCCccEEEE
Q 022278 213 PQAVPFDFNIHIMDFQPGD-FLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPF-VPQWYAALGKTRTRYL 290 (300)
Q Consensus 213 p~~~~~~~~~~~~tl~PG~-~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~-~~H~~~n~G~e~~~fi 290 (300)
+......+.+.+++++||+ ..+.|.|+..+|.+|||+|++.+.++|+++.+++||+++++++ ++|++.|.|+++++||
T Consensus 39 ~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l 118 (162)
T 3l2h_A 39 DAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCL 118 (162)
T ss_dssp HHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEE
T ss_pred CCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEE
Confidence 3344467889999999999 5887444378899999999999999999999999999999998 9999999999999998
Q ss_pred EEee
Q 022278 291 LYKD 294 (300)
Q Consensus 291 ~~kd 294 (300)
+...
T Consensus 119 ~v~~ 122 (162)
T 3l2h_A 119 VIGQ 122 (162)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 8654
No 53
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.47 E-value=5.4e-13 Score=107.41 Aligned_cols=86 Identities=16% Similarity=0.241 Sum_probs=74.9
Q ss_pred eEEEEeeC-CCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 206 FQLRKLLP-QAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 206 ~~~~~l~p-~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
+..+.+.| .+....+.+...+++||...+. |.|...|.+||++|++.+.+||+.+.+++||++++++|++|++.|.|+
T Consensus 19 ~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~-H~H~~~Ei~~v~~G~~~~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~ 97 (128)
T 4i4a_A 19 LDGSRLLPWEGLNTPFGGAWCIVRPETKSFR-HSHNEYELFIVIQGNAIIRINDEDFPVTKGDLIIIPLDSEHHVINNNQ 97 (128)
T ss_dssp EEEEECCCCTTCCCSSEEEEEEECTTEECCC-BCCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred CceEeecCccccCCCcEEEEEEECCCCccCC-EecCCeEEEEEEeCEEEEEECCEEEEECCCcEEEECCCCcEEeEeCCC
Confidence 34455666 3445678888999999999986 677888999999999999999999999999999999999999999999
Q ss_pred ccEEEEEE
Q 022278 285 TRTRYLLY 292 (300)
Q Consensus 285 e~~~fi~~ 292 (300)
++++|++.
T Consensus 98 ~~~~~~~i 105 (128)
T 4i4a_A 98 EDFHFYTI 105 (128)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 99988753
No 54
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.46 E-value=1.7e-13 Score=115.77 Aligned_cols=100 Identities=9% Similarity=0.088 Sum_probs=80.6
Q ss_pred eCCCCeeeccCCCCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEE
Q 022278 74 ITPESHVLSPLPEWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYT 153 (300)
Q Consensus 74 ~~~e~~~~~~~p~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~ 153 (300)
++.++++....|+- +..+..+.++..+..|...+++++ ++... ..+..+|++|||+|++++++ +|+++.|++||++
T Consensus 37 ~~~~er~~~G~p~~-~v~i~~l~s~~~~~~~s~g~~~~e-~~~~~-~~~~~eE~~yVLeG~~~l~i-~g~~~~l~~GD~i 112 (151)
T 4axo_A 37 VSESDRLDTGNPSD-VVYTKDLFTLEESPRLGCGMMEMK-ETTFD-WTLNYDEIDYVIDGTLDIII-DGRKVSASSGELI 112 (151)
T ss_dssp CCGGGBCCCSCTTC-CEEEEECSCTTTCSSCEEEEEEEE-EEEEE-EECSSEEEEEEEEEEEEEEE-TTEEEEEETTCEE
T ss_pred ccchhccccCCCCC-CEEEEEeecCCCCCcEEEEEEEEc-Ccccc-EeCCCcEEEEEEEeEEEEEE-CCEEEEEcCCCEE
Confidence 33445555555653 366667888777778999999887 43322 25789999999999999999 9999999999999
Q ss_pred EeCCCCceEEeeCCeEEEEEEEee
Q 022278 154 YLPPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 154 yfpa~~~H~~~N~~~a~vl~v~~~ 177 (300)
|||+|.+|+|+|.++++++||..+
T Consensus 113 ~iP~G~~h~~~n~~~a~~l~V~~P 136 (151)
T 4axo_A 113 FIPKGSKIQFSVPDYARFIYVTYP 136 (151)
T ss_dssp EECTTCEEEEEEEEEEEEEEEEEC
T ss_pred EECCCCEEEEEeCCCEEEEEEECC
Confidence 999999999999889999999653
No 55
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.46 E-value=1.9e-13 Score=109.27 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=67.1
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEE
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v 174 (300)
+.++++..++++||+..+.|.|+++|++||++|++++++ +|+++.|++||++++|++.+|+++|.++++++++
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV-DGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCCcEEEEEEECEEEEEE-CCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 457899999999999888888999999999999999999 9999999999999999999999999777776664
No 56
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.46 E-value=3.4e-13 Score=108.37 Aligned_cols=95 Identities=12% Similarity=0.097 Sum_probs=77.5
Q ss_pred cCCCCCCcccCC-ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEE
Q 022278 192 STDKQPLLETPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLW 270 (300)
Q Consensus 192 ~~~d~~~~~~~g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~ 270 (300)
.++++++..... .++..+.+ . +..+.+..++++||+.++. |.|..+|.+|||+|++.+.++|+.+.+++||++|
T Consensus 16 ~~~~~~~~~~~~~~G~~~~~~-~---~~~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ 90 (126)
T 4e2g_A 16 FYDLTEVRSFSPLPGFAMQAI-Q---GKNLMLNWVRIEPNTEMPA-HEHPHEQAGVMLEGTLELTIGEETRVLRPGMAYT 90 (126)
T ss_dssp EEEGGGSCCBCSSTTEEEEEE-E---CSSCEEEEEEECTTCEEEE-ECCSSEEEEEEEEECEEEEETTEEEEECTTEEEE
T ss_pred hhhcccceecccCCCeEEEEE-e---CCCeEEEEEEECCCCcCCC-ccCCCceEEEEEEeEEEEEECCEEEEeCCCCEEE
Confidence 356666666542 34444444 2 2357788999999999986 7888899999999999999999999999999999
Q ss_pred eCCCCceeEEecCCccEEEEEE
Q 022278 271 MAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 271 ~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
++++++|++.|.|+ ++++|..
T Consensus 91 ip~~~~H~~~~~~~-~~~~l~v 111 (126)
T 4e2g_A 91 IPGGVRHRARTFED-GCLVLDI 111 (126)
T ss_dssp ECTTCCEEEECCTT-CEEEEEE
T ss_pred ECCCCcEEeEECCC-CEEEEEE
Confidence 99999999999998 7777654
No 57
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.46 E-value=2.3e-13 Score=108.20 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=69.5
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEE-EccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWY-PVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~-~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
.+.+..++++||...+. |.|..++.+||++|++.+.++|+.+ .+++||++|+++|++|++.|.|+++++|++.+--
T Consensus 26 ~~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~ 102 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPK-HYSNSYVHLIIIKGEMTLTLEDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAP 102 (117)
T ss_dssp SCEEEEEEEETTCBCCC-EECSSCEEEEEEESEEEEEETTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECS
T ss_pred ceEEEEEEECCCCcCCC-EeCCCcEEEEEEeCEEEEEECCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 45677899999999986 7888889999999999999999999 9999999999999999999999999999988533
No 58
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.46 E-value=2.4e-13 Score=114.58 Aligned_cols=85 Identities=19% Similarity=0.277 Sum_probs=74.1
Q ss_pred EEEecCCCC-CcEEEEEEEEcCCCc-CCCCCC-CceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCC-CceEEee--C
Q 022278 93 AYLITPAMG-SHFVMYLANMQENAR-SALPPH-DVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN-FAHSLRA--E 166 (300)
Q Consensus 93 ~~L~sp~~g-~~f~~~lv~l~PG~~-~~~~~h-~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~-~~H~~~N--~ 166 (300)
...+++..| ..|++++++++||+. .+.|.| ..+|++||++|++++++ +++++.|++||++++|++ .+|+++| +
T Consensus 34 ~~~l~~~~g~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~-~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 34 NKSLGDAVGLRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM-ENDQYPIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EEEHHHHHTCCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTSCCEEEECCSS
T ss_pred EEEccCCCCCCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE-CCEEEEeCCCCEEEECCCCceEEeEeCCC
Confidence 344555555 589999999999994 677767 88999999999999999 999999999999999998 9999999 6
Q ss_pred CeEEEEEEEeec
Q 022278 167 GSATLVVFERRY 178 (300)
Q Consensus 167 ~~a~vl~v~~~y 178 (300)
++++++|+..+.
T Consensus 113 ~~~~~l~v~~p~ 124 (162)
T 3l2h_A 113 ETLVCLVIGQRL 124 (162)
T ss_dssp SCEEEEEEEECC
T ss_pred CCEEEEEEECCC
Confidence 889999997654
No 59
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.46 E-value=3.4e-13 Score=107.88 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=69.4
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
.+.+..++++||..++. |.|.+++.+|||+|++.+.+||+++.+++||++|++++++|++.|.++..+..++.++-
T Consensus 35 ~~~v~~~~l~~G~~~~~-H~H~~~e~~~Vl~G~~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGS-HSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp TEEEEEEEECTTCEEEE-ECCSSCEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred CEEEEEEEECCCCccCc-eeCCCcEEEEEEECEEEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 56788999999999996 78888999999999999999999999999999999999999999999988888777654
No 60
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.45 E-value=4e-13 Score=115.03 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=79.5
Q ss_pred CCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-
Q 022278 87 WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 165 (300)
Q Consensus 87 ~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N- 165 (300)
+++...++|+++.. ..|.+.+++++||+..+.|.|..+|++||++|++++++ +|+++.|++||++++|++.+|.++|
T Consensus 37 ~~gv~~r~L~~~~~-~~~~~~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v-~g~~~~l~~GD~i~ip~g~~H~~~n~ 114 (166)
T 3jzv_A 37 FRSVTRQVLFSGNG-LTGELRYFEVGPGGHSTLERHQHAHGVMILKGRGHAMV-GRAVSAVAPYDLVTIPGWSWHQFRAP 114 (166)
T ss_dssp CEEEEEEEEECCTT-CSEEEEEEEEEEEEECCCBBCSSCEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEECC
T ss_pred cCCeEEEEEECCCC-CeEEEEEEEECCCCccCceeCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeC
Confidence 45577788887664 68999999999999988888999999999999999999 9999999999999999999999998
Q ss_pred -CCeEEEEEEEee
Q 022278 166 -EGSATLVVFERR 177 (300)
Q Consensus 166 -~~~a~vl~v~~~ 177 (300)
+++++++++...
T Consensus 115 ~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 115 ADEALGFLCMVNA 127 (166)
T ss_dssp TTSCEEEEEEEES
T ss_pred CCCCEEEEEEEcc
Confidence 678999988654
No 61
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.45 E-value=2.8e-13 Score=115.25 Aligned_cols=87 Identities=21% Similarity=0.318 Sum_probs=74.6
Q ss_pred eEEEEecCCCC-CcEEEEEEEEcCCCcC-CCCCCCc-eEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCC--CceEEee
Q 022278 91 LGAYLITPAMG-SHFVMYLANMQENARS-ALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA 165 (300)
Q Consensus 91 ~~~~L~sp~~g-~~f~~~lv~l~PG~~~-~~~~h~g-EEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~--~~H~~~N 165 (300)
..+.++++..+ ..|++++++++||+.. ..|.|.+ ||++|||+|++++++ +++++.|++||++++|++ .+|+++|
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~-~~~~~~l~~GD~i~ip~~~~~~H~~~n 107 (163)
T 3i7d_A 29 RSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD-DQGEHPMVPGDCAAFPAGDPNGHQFVN 107 (163)
T ss_dssp EEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTCCCCBEEEC
T ss_pred eEEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE-CCEEEEeCCCCEEEECCCCCcceEEEE
Confidence 34555555555 6899999999999966 5677776 799999999999999 999999999999999999 9999999
Q ss_pred --CCeEEEEEEEeec
Q 022278 166 --EGSATLVVFERRY 178 (300)
Q Consensus 166 --~~~a~vl~v~~~y 178 (300)
+++++++++..+-
T Consensus 108 ~~~~~~~~l~v~~p~ 122 (163)
T 3i7d_A 108 RTDAPATFLVVGTRT 122 (163)
T ss_dssp CSSSCEEEEEEEECC
T ss_pred CCCCCEEEEEEECCC
Confidence 6789999996543
No 62
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.45 E-value=4.7e-13 Score=122.72 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=78.6
Q ss_pred CcceEEEEecCCCCCcEEEEEEEEcCCCcCCC-CCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-
Q 022278 88 TNTLGAYLITPAMGSHFVMYLANMQENARSAL-PPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 165 (300)
Q Consensus 88 ~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~-~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N- 165 (300)
.+...+++.++..+..|++++++++||+..+. |.|..+|++|||+|++++.+ +|+++.|++||+++||++.+|.++|
T Consensus 166 ~g~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i-~~~~~~l~~GD~i~i~~~~~H~~~n~ 244 (274)
T 1sef_A 166 TDVLLWSLLPKEFDFDMNMHILSFEPGASHAYIETHVQEHGAYLISGQGMYNL-DNEWYPVEKGDYIFMSAYVPQAAYAV 244 (274)
T ss_dssp TTEEEEECSCSSTTCSEEEEEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE-TTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred CCeEEEEeCCcccCCCEEEEEEEECCCCccCcceeccCeEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEeC
Confidence 34567777777778899999999999998877 88999999999999999999 9999999999999999999999998
Q ss_pred -C-CeEEEEEEEe
Q 022278 166 -E-GSATLVVFER 176 (300)
Q Consensus 166 -~-~~a~vl~v~~ 176 (300)
+ ++++++++..
T Consensus 245 ~~~~~~~~l~~~~ 257 (274)
T 1sef_A 245 GREEPLMYVYSKD 257 (274)
T ss_dssp CSSSCEEEEEEEE
T ss_pred CCCCCEEEEEEEc
Confidence 5 7789888843
No 63
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.45 E-value=4.2e-13 Score=104.81 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=68.2
Q ss_pred cceEEEEEEecCCcccCcc-eeec-cceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVK-EVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~-~~H~-~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
..+.+..++++||..++.| |.|. .++.+||++|++.+.++|+++.+++||+++++++++|++.|.|++++++++.
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v 95 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNF 95 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 3577889999999998864 3676 7899999999999999999999999999999999999999999999998876
No 64
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.45 E-value=4.1e-13 Score=102.97 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=72.1
Q ss_pred eeEEEEeeCCCCCcceEEEEEEecCCcccCcceeec-cceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 205 VFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 205 ~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~-~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
++..+.+.+ ...+.+..++++||..++. |.|. .++.+||++|++.+.++|+++.+++||++++++|++|++.|.|
T Consensus 16 ~~~~~~~~~---~~~~~~~~~~~~pg~~~~~-H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 16 KMAKIPVFQ---SERMLYDLYALLPGQAQKV-HVHEGSDKVYYALEGEVVVRVGEEEALLAPGMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp SCEEEEEEE---ETTEEEEEEEECTTCEEEE-ECCSSCEEEEEEEESCEEEEETTEEEEECTTCEEEECTTSCEEEECCS
T ss_pred ccccceecC---CCceEEEEEEECCCCcCCc-cCCCCCcEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEeEeCC
Confidence 344455553 2346778899999999986 6676 4689999999999999999999999999999999999999999
Q ss_pred CccEEEEEEe
Q 022278 284 KTRTRYLLYK 293 (300)
Q Consensus 284 ~e~~~fi~~k 293 (300)
++++++++.-
T Consensus 92 ~~~~~~~~v~ 101 (105)
T 1v70_A 92 ASPALLLVVT 101 (105)
T ss_dssp SSCEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999998764
No 65
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.44 E-value=4.2e-12 Score=123.39 Aligned_cols=193 Identities=14% Similarity=0.117 Sum_probs=128.6
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc---CCcEEEeccCcEEEeCCCCceEEee-C--CeEEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNA---SGVSSKLMVDSYTYLPPNFAHSLRA-E--GSATLVVFE 175 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~---gg~~~~L~~Gds~yfpa~~~H~~~N-~--~~a~vl~v~ 175 (300)
+.+....+++.|++-..+|....+|++||++|++.+.+. +.+++.|++||.++||+|..|.+.| + +..+++.+.
T Consensus 42 ~~~~l~~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~ 121 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKIS 121 (418)
T ss_dssp TTCEEEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cceEEEEEEecCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEee
Confidence 567777889999988877655789999999999998762 2357899999999999999999999 3 344555432
Q ss_pred eecc-c-------cCC-CCcceeeccCC----------------------------------------------------
Q 022278 176 RRYA-S-------LEN-HITEQIVGSTD---------------------------------------------------- 194 (300)
Q Consensus 176 ~~y~-~-------~~g-~~p~~~~~~~~---------------------------------------------------- 194 (300)
..-. | +.| ..|..+++..+
T Consensus 122 ~~s~~pg~~~~f~laG~~~~~s~~~gf~~evLa~af~v~~~~v~kl~~~~~~~~~~~~~~~~~~~~~~~~q~~g~Iv~~~ 201 (418)
T 3s7i_A 122 MPVNTPGQFEDFFPASSRDQSSYLQGFSRNTLEAAFNAEFNEIRRVLLEENAGGEQEERGQRRWSTRSSENNEGVIVKVS 201 (418)
T ss_dssp EESSBTTBCCEECSSCCSSCCCGGGGSCHHHHHHHHTSCHHHHHHHTTSCC--------------------CCCSEEECC
T ss_pred cCcCCCCccceeeccCCcchhHHhhcCCHHHHHHHHCcCHHHHHhhhcccccccccccccccccccccccccCCceEEcC
Confidence 1110 1 111 00000111000
Q ss_pred -----------------CCCCc-------------c-c--CCceeEEEEeeCCCC-C----cceEEEEEEecCCcccCcc
Q 022278 195 -----------------KQPLL-------------E-T--PGEVFQLRKLLPQAV-P----FDFNIHIMDFQPGDFLNVK 236 (300)
Q Consensus 195 -----------------d~~~~-------------~-~--~g~~~~~~~l~p~~~-~----~~~~~~~~tl~PG~~~p~~ 236 (300)
..+.. + + .+|. +..+.+.+. . -++.+.+.+|+||+-.+.
T Consensus 202 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~nl~~~~p~~~n~~G~--~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~P- 278 (418)
T 3s7i_A 202 KEHVEELTKHAKSVSKKGSEEEGDITNPINLREGEPDLSNNFGK--LFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLP- 278 (418)
T ss_dssp HHHHHHHHTTCBC--------CTTCCCCEETTCSCCSEEETTEE--EEEECSBTTBHHHHHHTCEEEEEEECTTEEEEE-
T ss_pred hhhhhhccccccccCCCCcCcccCCCcccccccCCCceeCCCCe--EEEechHHcchhhccCCeeEEEEEecCCceeCc-
Confidence 00000 0 0 0121 222333333 1 247899999999999986
Q ss_pred eeecc-ceEEEEEEeeEEEEe---CC--------------------------E-EEEccCCcEEEeCCCCceeEEecCCc
Q 022278 237 EVHYN-QHGLLLLEGQGIYRL---GD--------------------------S-WYPVQAGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 237 ~~H~~-eh~~~iL~G~G~~~~---~g--------------------------~-~~~v~~GD~i~~~~~~~H~~~n~G~e 285 (300)
|.|+. .+..||++|+|.+.+ ++ . ...+++||++++|.|.+||..|.+
T Consensus 279 H~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~-- 356 (418)
T 3s7i_A 279 HFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS-- 356 (418)
T ss_dssp EEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--
T ss_pred eecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--
Confidence 67754 478999999997653 32 1 467899999999999999999865
Q ss_pred cEEEEEEeecCCCC
Q 022278 286 RTRYLLYKDVNRNP 299 (300)
Q Consensus 286 ~~~fi~~kd~nr~~ 299 (300)
+++|++++.-++.|
T Consensus 357 ~l~~v~f~~~~~~~ 370 (418)
T 3s7i_A 357 ELHLLGFGINAENN 370 (418)
T ss_dssp CEEEEEEEESCTTC
T ss_pred CEEEEEEEcCCCCC
Confidence 59999998666544
No 66
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.44 E-value=5.9e-12 Score=124.71 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=63.8
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeC---CE---EEEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG---DS---WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~---g~---~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
++.+..++|+||+..+. |.|+. .+.+||++|++.+.+- |. ...|++||++++|.|.+|+ .+.|+++++|++
T Consensus 393 giS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~-~~ag~e~l~fla 470 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSP-HWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVI-QQAGNQGFEYFA 470 (531)
T ss_dssp TCEEEEEEECTTCEEEE-EEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE-EEEEEEEEEEEE
T ss_pred ceeEEEEEeecCccccc-eEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEE-EecCCCCEEEEE
Confidence 57889999999999986 77875 5889999999998873 32 5789999999999999995 456799999999
Q ss_pred Eee
Q 022278 292 YKD 294 (300)
Q Consensus 292 ~kd 294 (300)
|++
T Consensus 471 F~s 473 (531)
T 3fz3_A 471 FKT 473 (531)
T ss_dssp EES
T ss_pred Eec
Confidence 986
No 67
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.43 E-value=7.2e-13 Score=104.76 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=73.2
Q ss_pred cceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCe
Q 022278 89 NTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGS 168 (300)
Q Consensus 89 ~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~ 168 (300)
+...+.+... .++.+..++++||+..+.|.|+.+|++||++|++++.+ +|+++.|++||++++|++.+|+++|..+
T Consensus 22 g~~~~~l~~~---~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~ 97 (116)
T 2pfw_A 22 GLKRQMLGFN---HELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV-DGVIKVLTAGDSFFVPPHVDHGAVCPTG 97 (116)
T ss_dssp TEEEEEEEEE---TTEEEEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEEESSC
T ss_pred CeEEEEEecC---CceEEEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE-CCEEEEeCCCCEEEECcCCceeeEeCCC
Confidence 3455556543 35999999999998877788999999999999999999 9999999999999999999999999778
Q ss_pred EEEEEEEe
Q 022278 169 ATLVVFER 176 (300)
Q Consensus 169 a~vl~v~~ 176 (300)
++++++..
T Consensus 98 ~~~l~v~~ 105 (116)
T 2pfw_A 98 GILIDTFS 105 (116)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEC
Confidence 99988854
No 68
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.43 E-value=7.2e-13 Score=107.34 Aligned_cols=85 Identities=12% Similarity=0.079 Sum_probs=69.0
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
+.+.+..+...+....+.+..++++||+.++.| ...+|.+|||+|++.+.+||+.+.+++||++++++|++|++.|.+
T Consensus 24 ~~~~~g~v~s~~~~~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 24 ADISVGNLVDERHGGPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTDGETVTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEEEEEEC------CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCEEEEEEEE
T ss_pred CCEEEEEeecCCCCCCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCEEEEEcCC
Confidence 667777777666567788899999999998763 377789999999999999999999999999999999999999986
Q ss_pred CccEEEEE
Q 022278 284 KTRTRYLL 291 (300)
Q Consensus 284 ~e~~~fi~ 291 (300)
++.++|+
T Consensus 102 -~~~~~l~ 108 (119)
T 3lwc_A 102 -EGALTAY 108 (119)
T ss_dssp -EEEEEEE
T ss_pred -CCeEEEE
Confidence 5666554
No 69
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.43 E-value=1.1e-12 Score=103.90 Aligned_cols=74 Identities=12% Similarity=0.209 Sum_probs=67.0
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEe
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~ 176 (300)
..+.+.++++.||...+.|.|+.+|++||++|++++.+ +++++.|++||++++|++.+|.++|.++++++++..
T Consensus 36 ~~~~~~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i-~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i~~ 109 (114)
T 2ozj_A 36 DRVQISLFSFADGESVSEEEYFGDTLYLILQGEAVITF-DDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITL 109 (114)
T ss_dssp SSEEEEEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE-TTEEEEECTTCEEEECTTCCBEEEEEEEEEEEEEEE
T ss_pred CCceEEEEEECCCCccccEECCCCeEEEEEeCEEEEEE-CCEEEEecCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 34677788899998877788999999999999999999 999999999999999999999999977899988854
No 70
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.43 E-value=5.3e-13 Score=122.99 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=78.6
Q ss_pred cCC-ceeEEEEeeCC--CCCcceEEEEEEecCCccc-CcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCc
Q 022278 201 TPG-EVFQLRKLLPQ--AVPFDFNIHIMDFQPGDFL-NVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 201 ~~g-~~~~~~~l~p~--~~~~~~~~~~~tl~PG~~~-p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~ 276 (300)
.++ ++...+.|... ..+..+.+.+++++||+.. ..+|+|..+|.+|||+|++.+++||+++.+++||+++++++++
T Consensus 46 lp~~~~~~~~~L~~p~~~~~~~~~~~~~~l~PG~~~~~~~h~H~~eE~~~Vl~G~l~v~v~g~~~~L~~GD~i~ip~~~~ 125 (278)
T 1sq4_A 46 LPFWDNMRMWVIARPLSGFAETFSQYIVELAPNGGSDKPEQDPNAEAVLFVVEGELSLTLQGQVHAMQPGGYAFIPPGAD 125 (278)
T ss_dssp CTTCEEEEEEEECCCSSSSCCSCEEEEEEEEEEEEESSCCCCTTEEEEEEEEESCEEEEESSCEEEECTTEEEEECTTCC
T ss_pred CCCccCcEEEEEecCCCCCCCcEEEEEEEECCCCccCCCCcCCCceEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCc
Confidence 444 44455666643 3456788889999999988 2346688889999999999999999999999999999999999
Q ss_pred eeEEecCCccEEEEEEee
Q 022278 277 QWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 277 H~~~n~G~e~~~fi~~kd 294 (300)
|++.|.|+++++|++...
T Consensus 126 H~~~N~g~~~~~~l~v~~ 143 (278)
T 1sq4_A 126 YKVRNTTGQHTRFHWIRK 143 (278)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEECCCCCEEEEEEEe
Confidence 999999999999998753
No 71
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.43 E-value=2.2e-12 Score=101.93 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=77.8
Q ss_pred cCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEe
Q 022278 192 STDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM 271 (300)
Q Consensus 192 ~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~ 271 (300)
..+++++.+... ++..+.|.+.+ .+.+..++++||...+. |.|..+|.+||++|++.+.+||+.+.+++||++|+
T Consensus 10 ~~~~~~~~~~~~-g~~~~~l~~~~---~~~~~~~~~~pg~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~i 84 (116)
T 2pfw_A 10 FGEQTEIEDIGG-GLKRQMLGFNH---ELMAVKIWFDKGAEGYV-HAHRHSQVSYVVEGEFHVNVDGVIKVLTAGDSFFV 84 (116)
T ss_dssp CTTTSCCEECST-TEEEEEEEEET---TEEEEEEEECTTEEEEE-ECCSSEEEEEEEEECEEEEETTEEEEECTTCEEEE
T ss_pred cccCceeeeCCC-CeEEEEEecCC---ceEEEEEEECCCCcCCc-EECCcceEEEEEeeEEEEEECCEEEEeCCCCEEEE
Confidence 578888877643 34556665542 37788999999999886 78888899999999999999999999999999999
Q ss_pred CCCCceeEEecCCccEEEEEE
Q 022278 272 APFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+++++|++.|.+ +.+++..
T Consensus 85 p~~~~H~~~~~~--~~~~l~v 103 (116)
T 2pfw_A 85 PPHVDHGAVCPT--GGILIDT 103 (116)
T ss_dssp CTTCCEEEEESS--CEEEEEE
T ss_pred CcCCceeeEeCC--CcEEEEE
Confidence 999999999998 4555543
No 72
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.42 E-value=7.4e-13 Score=101.55 Aligned_cols=75 Identities=13% Similarity=0.258 Sum_probs=67.7
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEe
Q 022278 101 GSHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFER 176 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~ 176 (300)
+..+...+++++||+..+.|.|.+ +|++||++|++++.+ +++++.|++||++++|++.+|+++| +++++++++..
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV-GEEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeC
Confidence 457899999999998887787875 899999999999999 9999999999999999999999998 46899998854
No 73
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.42 E-value=4.3e-12 Score=125.40 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=61.5
Q ss_pred ceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEe-C---CEEE--EccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL-G---DSWY--PVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~-~---g~~~--~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
++.+..+.|+||+..+. |.|+.. +..||++|++.+.+ + .+.+ .|++||+.++|.|.+|...| ++++++||+
T Consensus 357 giS~a~v~L~pGgm~~P-HwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a-~~e~~~~l~ 434 (496)
T 3ksc_A 357 KLSAEHGSLHKNAMFVP-HYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKS-LSDRFSYVA 434 (496)
T ss_dssp TCEEEEEEEETTCEEEE-EEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEE
T ss_pred ceeEEEEEeeCCeEECC-eeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEe-CCCCEEEEE
Confidence 36889999999999997 566554 88999999998873 2 2444 59999999999999997666 589999999
Q ss_pred Eeec
Q 022278 292 YKDV 295 (300)
Q Consensus 292 ~kd~ 295 (300)
+++-
T Consensus 435 f~~s 438 (496)
T 3ksc_A 435 FKTN 438 (496)
T ss_dssp EESS
T ss_pred EECC
Confidence 9853
No 74
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.42 E-value=9.3e-13 Score=113.58 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=67.0
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
....+++++|+||+..+. |.|..+|.+|||+|+..+.++ |+++.+++||.+ ++++.+|++.|.|++++++|+-
T Consensus 77 ~G~~~~~v~l~PG~~~~~-H~H~~eE~~~VLeGel~l~ld~ge~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPM-HRTNSIDYGIVLEGEIELELDDGAKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp CSEEEEEEEECTTCBCCC-BCCSEEEEEEEEESCEEEECGGGCEEEECTTCEE-EECSCCBEEECCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCCCCC-eecCceEEEEEEeCEEEEEECCCeEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEE
Confidence 357788999999999997 677777888999999999998 899999999999 9999999999999999999874
No 75
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.42 E-value=6.9e-13 Score=114.50 Aligned_cols=79 Identities=22% Similarity=0.245 Sum_probs=71.0
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC----CEEEEccCCcEEEeCCCCceeEEecCCc-cEEEEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG----DSWYPVQAGDVLWMAPFVPQWYAALGKT-RTRYLLY 292 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~----g~~~~v~~GD~i~~~~~~~H~~~n~G~e-~~~fi~~ 292 (300)
..+.+.+++++||+..+.| ||..+|.+|||+|++++.+. ++.+.+++||++++|+|.+|+++|+|++ ++++++.
T Consensus 39 ~~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp TTEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 3588999999999999875 77778999999999999996 8999999999999999999999999996 8999998
Q ss_pred eecCC
Q 022278 293 KDVNR 297 (300)
Q Consensus 293 kd~nr 297 (300)
.+.+-
T Consensus 118 ~~~~~ 122 (178)
T 1dgw_A 118 AITFR 122 (178)
T ss_dssp EECCS
T ss_pred ECCCC
Confidence 66543
No 76
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.42 E-value=6.2e-13 Score=121.99 Aligned_cols=98 Identities=8% Similarity=0.074 Sum_probs=84.7
Q ss_pred CCCCCcccCC-ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEe
Q 022278 194 DKQPLLETPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM 271 (300)
Q Consensus 194 ~d~~~~~~~g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~ 271 (300)
+++-....+| ++..++.|+....+..|.+.+++++||+..+. |+|..||.+|||+|+..+++| |+++.+++||++|+
T Consensus 43 ~~iv~s~lPg~~~~~~~vL~sP~~G~~f~~~lv~l~PGg~s~~-~~h~~EEfiyVleG~l~l~l~~g~~~~L~~Gds~y~ 121 (266)
T 4e2q_A 43 ESHVYSPLPDWTNTLGAYLITPATGSHFVMYLAKMKEMSSSGL-PPQDIERLIFVVEGAVTLTNTSSSSKKLTVDSYAYL 121 (266)
T ss_dssp GGCCCEECTTSSSEEEEEEECGGGTCSSEEEEEEECSSEECCC-CCTTEEEEEEEEEECEEEEC--CCCEEECTTEEEEE
T ss_pred cceEEeeCCCCcCEEEEEEcCCCCCCcEEEEEEEECcCCcCCC-CCCCCeEEEEEEEEEEEEEECCCcEEEEcCCCEEEE
Confidence 4566666777 66788888855446788899999999999986 689999999999999999999 99999999999999
Q ss_pred CCCCceeEEecCCccEEEEEEee
Q 022278 272 APFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
+++.+|++.|. ++.++++++-
T Consensus 122 p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 122 PPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp CTTCCCEEEES--SCEEEEEEEE
T ss_pred CCCCCEEEEeC--CCEEEEEEEe
Confidence 99999999994 7899998864
No 77
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.42 E-value=1.6e-13 Score=107.75 Aligned_cols=72 Identities=10% Similarity=0.047 Sum_probs=62.1
Q ss_pred ceEEEEEEecCCcccCcceeeccce-EEEEEEeeEEEEe-CCE--EEEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQH-GLLLLEGQGIYRL-GDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh-~~~iL~G~G~~~~-~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
.+.+..++|+||+.++. |.|.++. .+|+++|++.+.. ||+ +.++++||++|+++|.+|++.|.|+++++||+
T Consensus 16 ~v~v~~~~l~PG~~~~~-H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGH-HTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCS-EECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCc-EeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 56788999999999996 6777773 3456799999987 665 68999999999999999999999999999998
No 78
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.42 E-value=9.2e-13 Score=119.75 Aligned_cols=101 Identities=14% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCCCCcccCC-ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceee-ccceEEEEEEeeEEEEeCCEEEEccCCcEEEe
Q 022278 194 DKQPLLETPG-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVH-YNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM 271 (300)
Q Consensus 194 ~d~~~~~~~g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H-~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~ 271 (300)
+++.....++ ++...+.|.+...+..+.+.+++++||+..+.+++| ..||.+|||+|++.+++||+++.+++||.+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~~~~~~L~~Gd~~~~ 111 (261)
T 1rc6_A 32 DGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYC 111 (261)
T ss_dssp GGSCCBCCTTEEEEEEEECCCGGGTCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEETTEEEEEETTEEEEE
T ss_pred hhcEEeeccCCCCcEEEEEeCCCCCCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEECCEEEEECCCCEEEE
Confidence 4443333443 445666676544455677889999999988765444 57889999999999999999999999999999
Q ss_pred CCCCceeEEecCCccEEEEEEee
Q 022278 272 APFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
+++.+|++.|.|+++++|++.+-
T Consensus 112 ~~~~~H~~~N~~~~~~~~l~v~~ 134 (261)
T 1rc6_A 112 PPGSLMTFVNAQAEDSQIFLYKR 134 (261)
T ss_dssp CTTCCCEEEECSSSCEEEEEEEE
T ss_pred CCCCCEEEEeCCCCCEEEEEEEe
Confidence 99999999999999999998763
No 79
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.41 E-value=1.7e-12 Score=104.28 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=66.7
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEEee
Q 022278 102 SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFERR 177 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~ 177 (300)
..+.+.+++++||+..+.|.|.+ +|++||++|++++++.+|+++.|++||++++|++.+|+++| +++++++++..+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 37 NDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp SSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECSTTCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECCCeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 45788899999999988888885 99999999999999746889999999999999999999999 678999988544
No 80
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.40 E-value=9.8e-13 Score=113.65 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=75.4
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCc-ceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEec
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNV-KEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 282 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~-~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 282 (300)
+++..+.|.+......+.+..++++||+..+. .|+|..+|.+|||+|++.+.+||+++.+++||+++++++++|++.|.
T Consensus 88 ~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~ 167 (192)
T 1y9q_A 88 LNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAV 167 (192)
T ss_dssp TTEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEEEEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEES
T ss_pred CCEEEEEeccCCCCCcEEEEEEEECCCCCccCCCCCCCCEEEEEEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECC
Confidence 45566667776556678888899999998763 35677789999999999999999999999999999999999999999
Q ss_pred CCccEEEEEE
Q 022278 283 GKTRTRYLLY 292 (300)
Q Consensus 283 G~e~~~fi~~ 292 (300)
|++++ |++.
T Consensus 168 ~~~~~-~l~v 176 (192)
T 1y9q_A 168 TEKAV-FQNI 176 (192)
T ss_dssp SSCEE-EEEE
T ss_pred CCCcE-EEEE
Confidence 99998 7654
No 81
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.40 E-value=1.2e-12 Score=105.39 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=66.1
Q ss_pred CcceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 217 PFDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 217 ~~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
...+.+.+++++||..++..|.|... ..+||++|++.+.+||+.+.+++||++|++++++|++.|.|+++++|++.
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i 99 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITIDGEKIELQAGDWLRIAPDGKRQISAASDSPIGFLCI 99 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEETTEEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEECCEEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEE
Confidence 34567788999999999833677655 45569999999999999999999999999999999999999999998765
No 82
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.40 E-value=1.7e-13 Score=107.30 Aligned_cols=73 Identities=11% Similarity=0.047 Sum_probs=62.0
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC---EEEEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD---SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g---~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
.+-+.+++|+||+.++.|.|+..++.++|++|++.+.++| ++..+++||.+|+|.|..|.+.|.|++|++||-
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 3667889999999999844444456778889999999887 567789999999999999999999999999985
No 83
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.40 E-value=1.8e-12 Score=101.23 Aligned_cols=75 Identities=20% Similarity=0.265 Sum_probs=67.9
Q ss_pred CCcEEEEEEEEcCCCcCCCC--CCC-ceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 101 GSHFVMYLANMQENARSALP--PHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~--~h~-gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
+..++++.++++||+....| .|. .+|++||++|++++.+ +++++.|++||++++|++.+|+++| +++++++++.
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~ 96 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV-DGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFY 96 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE-TTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEE
Confidence 35789999999999887766 788 8999999999999999 9999999999999999999999998 5688988884
Q ss_pred e
Q 022278 176 R 176 (300)
Q Consensus 176 ~ 176 (300)
.
T Consensus 97 ~ 97 (113)
T 2gu9_A 97 H 97 (113)
T ss_dssp E
T ss_pred C
Confidence 4
No 84
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.39 E-value=4.2e-12 Score=100.13 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=71.2
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
+++..+.|... .++.+..++++||..++. |.|..++.+||++|++.+.++|+.+.+++||++|+++|++|++.|.+
T Consensus 27 ~~~~~~~l~~~---~~~~~~~~~~~~g~~~~~-H~H~~~e~~~vl~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~ 102 (115)
T 1yhf_A 27 DQMLSRTLVQR---QDLGITVFSLDKGQEIGR-HSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVE 102 (115)
T ss_dssp TCEEEEEEEEE---TTEEEEEEEECTTCEEEE-ECCSSEEEEEEEESEEEEEETTEEEEEETTCEEEECTTSCEEEEESS
T ss_pred CCeEEEEEEeC---CceEEEEEEECCCCccCC-EECCCcEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCEEEEECC
Confidence 34466666643 246778899999999986 78888899999999999999999999999999999999999999998
Q ss_pred CccEEEEEEe
Q 022278 284 KTRTRYLLYK 293 (300)
Q Consensus 284 ~e~~~fi~~k 293 (300)
+..+..++.+
T Consensus 103 ~~~~~~v~~~ 112 (115)
T 1yhf_A 103 AFQMLLVVVK 112 (115)
T ss_dssp CEEEEEEEEC
T ss_pred CceEEEEEEc
Confidence 6555555443
No 85
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.38 E-value=1.4e-12 Score=104.75 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=68.8
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeC-CeEEEEEEEee
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAE-GSATLVVFERR 177 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~-~~a~vl~v~~~ 177 (300)
+..+.+.+++++||+..+.|.|+.+|++||++|++++.+ +|+++.|++||++++|++.+|.++|. .+++++++..+
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~~p 114 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI-GEETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDIFSP 114 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE-TTEEEEECTTEEEEECTTCCEEEECCTTCEEEEEEEES
T ss_pred CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE-CCEEEEeCCCCEEEECCCCcEEeEECCCCEEEEEEECC
Confidence 457889999999999888888999999999999999999 99999999999999999999999993 36998888553
No 86
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.38 E-value=2.2e-12 Score=101.83 Aligned_cols=82 Identities=11% Similarity=0.175 Sum_probs=71.4
Q ss_pred ceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeE
Q 022278 90 TLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSA 169 (300)
Q Consensus 90 ~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a 169 (300)
...+.+.. +..+...+++++||...+.|.|+.+|++||++|++++.+ +|+++.|++||++++|++.+|+++|.+++
T Consensus 29 ~~~~~l~~---~~~~~~~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~ 104 (115)
T 1yhf_A 29 MLSRTLVQ---RQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI-DQETYRVAEGQTIVMPAGIPHALYAVEAF 104 (115)
T ss_dssp EEEEEEEE---ETTEEEEEEEECTTCEEEEECCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTSCEEEEESSCE
T ss_pred eEEEEEEe---CCceEEEEEEECCCCccCCEECCCcEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCCEEEEECCCc
Confidence 34444543 356888999999998888788999999999999999999 99999999999999999999999997788
Q ss_pred EEEEEE
Q 022278 170 TLVVFE 175 (300)
Q Consensus 170 ~vl~v~ 175 (300)
+++|+.
T Consensus 105 ~~~~v~ 110 (115)
T 1yhf_A 105 QMLLVV 110 (115)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 888873
No 87
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.38 E-value=2.1e-12 Score=107.56 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=67.1
Q ss_pred ceEEEEEEecCCcccCcceeec-cceEEEEEEeeEEEEeCCEE------EEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHY-NQHGLLLLEGQGIYRLGDSW------YPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~-~eh~~~iL~G~G~~~~~g~~------~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
.+.+..++++||..++. |.|. .++.+|||+|++.+.++|+. +.+++||++|+++|++|++.|.|+++++|++
T Consensus 42 ~~~~~~~~l~pg~~~~~-H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGL-EIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SCEEEEEEECTTCBCCC-BCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceEEEEEEECCCCccCc-eECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 46677899999999997 4555 56899999999999999999 9999999999999999999999999999887
Q ss_pred Eee
Q 022278 292 YKD 294 (300)
Q Consensus 292 ~kd 294 (300)
...
T Consensus 121 i~~ 123 (148)
T 2oa2_A 121 IYA 123 (148)
T ss_dssp EEE
T ss_pred EEC
Confidence 643
No 88
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.37 E-value=1.8e-12 Score=122.53 Aligned_cols=143 Identities=13% Similarity=0.135 Sum_probs=104.2
Q ss_pred CCcccccccCCCCcceeeecCCCC--------Chhh----hhcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEE
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTL--------SPSH----LQDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYL 95 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~--------sps~----I~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L 95 (300)
..+.||++.++++.++++++++.. +|++ +.++++...+.|+... ...... . ...+..++++
T Consensus 151 p~~vLa~~~~v~~~~~~~l~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~----~~~gg~~~~~ 223 (361)
T 2vqa_A 151 PIAWVEENLGWTAAQVAQLPKKQVYISSYGPASGPLASATPQGQTAKIEVPHTHNL--LGQQPL-V----SLGGNELRLA 223 (361)
T ss_dssp CHHHHHHHHTCCHHHHTTSCSSCCCEECSSCCCCCGGGCCCSSCCCBCCSCCEEEC--TTSCCS-E----EETTEEEEEE
T ss_pred CHHHHHHHhCcCHHHHHhccccCceEEeCCCCCCccccccccCcCCCCCcceEecc--ccCCCc-c----cCCCceEEEE
Confidence 457789999999999999998875 3442 3344455555444210 000000 0 1123456666
Q ss_pred ecCCCC--CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEE--cCCc--EEEeccCcEEEeCCCCceEEee--C
Q 022278 96 ITPAMG--SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTN--ASGV--SSKLMVDSYTYLPPNFAHSLRA--E 166 (300)
Q Consensus 96 ~sp~~g--~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v--~gg~--~~~L~~Gds~yfpa~~~H~~~N--~ 166 (300)
.++... +.|.+.+++++||+..+.|.|.+ +|++||++|++++++ .+|+ ++.|++||++++|++.+|.++| +
T Consensus 224 ~~~~~~~~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 224 SAKEFPGSFNMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp CTTTCTTSTTCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSS
T ss_pred ehhhCcCcccceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCC
Confidence 665443 37999999999999887787777 999999999999997 2466 8999999999999999999999 5
Q ss_pred CeEEEEEEEee
Q 022278 167 GSATLVVFERR 177 (300)
Q Consensus 167 ~~a~vl~v~~~ 177 (300)
++++++++...
T Consensus 304 ~~~~~l~~~~~ 314 (361)
T 2vqa_A 304 KPLDIVVVFND 314 (361)
T ss_dssp SCEEEEEEESS
T ss_pred CCEEEEEEECC
Confidence 78999999543
No 89
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.36 E-value=1.5e-12 Score=126.57 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=71.5
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe----CCEEEEccCCcEEEeCCCCceeEEecC-CccEEEEEEe
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 293 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 293 (300)
++.+.+++++||+..+.| ||..+|.+|||+|+|++.+ +++++.|++||++++|+|.+||++|+| ++++++|+..
T Consensus 48 ~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~ 126 (416)
T 1uij_A 48 DYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLA 126 (416)
T ss_dssp TCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEe
Confidence 499999999999999986 8888999999999999997 689999999999999999999999995 9999999998
Q ss_pred ecC
Q 022278 294 DVN 296 (300)
Q Consensus 294 d~n 296 (300)
+.+
T Consensus 127 ~~~ 129 (416)
T 1uij_A 127 IPV 129 (416)
T ss_dssp EES
T ss_pred ccC
Confidence 864
No 90
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.36 E-value=1.2e-12 Score=125.02 Aligned_cols=142 Identities=10% Similarity=0.004 Sum_probs=101.5
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh------h-----hcccCCcceeeeeeeeEeCCCCeeeccCCCCCcceEEEE
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH------L-----QDLPGFTRSVYKRDHALITPESHVLSPLPEWTNTLGAYL 95 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~------I-----~~~lg~trs~f~~~~av~~~e~~~~~~~p~~~~~~~~~L 95 (300)
.+.+.||+.+++|+..+++++++...+.. + ....+.... ..+++..+..... ..+...+++
T Consensus 175 ~p~evla~~~~vs~~~~~~l~~~~~~i~~~~~p~~l~~~~~~~~~~~~~~-----~~v~~~~~~~~~~---~~~g~~~~~ 246 (385)
T 1j58_A 175 TPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSLKDDIVEGPNGEVPY-----PFTYRLLEQEPIE---SEGGKVYIA 246 (385)
T ss_dssp SCHHHHHHHHTCCTGGGTTSCSSCCSEECCCCCCCHHHHCCCCTTCCCSS-----CSEEEGGGSCCEE---CSSEEEEEE
T ss_pred ccHHHHHHHhCCCHHHHHhcccccceEeccCCCCccccccccCCCCCCCC-----CeeeecccCCCee---CCCceEEEe
Confidence 45678899999999999999987653221 0 000111000 0112211111111 122345667
Q ss_pred ecCCCC--CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcC-----CcEEEeccCcEEEeCCCCceEEee--
Q 022278 96 ITPAMG--SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNAS-----GVSSKLMVDSYTYLPPNFAHSLRA-- 165 (300)
Q Consensus 96 ~sp~~g--~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~g-----g~~~~L~~Gds~yfpa~~~H~~~N-- 165 (300)
.++..+ +.|++++++++||+....|.|.+ +|++||++|++++++ + ++++.|++||++++|++.+|.++|
T Consensus 247 ~~~~~~~~~~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i-~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~ 325 (385)
T 1j58_A 247 DSTNFKVSKTIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTV-FASDGHARTFNYQAGDVGYVPFAMGHYVENIG 325 (385)
T ss_dssp STTTSTTCCSCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEE-EEETTEEEEEEEESSCEEEECTTCBEEEEECS
T ss_pred ecccCCcccceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEE-EcCCCcEEEEEEcCCCEEEECCCCeEEEEECC
Confidence 666554 47999999999999887787888 999999999999999 7 789999999999999999999999
Q ss_pred CCeEEEEEEEee
Q 022278 166 EGSATLVVFERR 177 (300)
Q Consensus 166 ~~~a~vl~v~~~ 177 (300)
+++++++++..+
T Consensus 326 ~~~~~~l~v~~~ 337 (385)
T 1j58_A 326 DEPLVFLEIFKD 337 (385)
T ss_dssp SSCEEEEEEESS
T ss_pred CCCEEEEEEECC
Confidence 678999998553
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.36 E-value=2.5e-12 Score=123.98 Aligned_cols=77 Identities=14% Similarity=0.006 Sum_probs=71.2
Q ss_pred CcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEE-EeCCEEEEccCCcEEEeCCCCceeEEe-cCCccEEEEEEee
Q 022278 217 PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY-RLGDSWYPVQAGDVLWMAPFVPQWYAA-LGKTRTRYLLYKD 294 (300)
Q Consensus 217 ~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~-~~~g~~~~v~~GD~i~~~~~~~H~~~n-~G~e~~~fi~~kd 294 (300)
...+.+++.+++||+.++. |.|..++.+|||+|+|.+ .+||+.+++++||++++|+|..|++.| .|++++.||+.-|
T Consensus 120 t~~L~a~~~~l~PG~~~~~-HrH~~~ev~~IleG~G~~t~v~G~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~v~d 198 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGA-HRHAASALRFIMEGSGAYTIVDGHKVELGANDFVLTPNGTWHEHGILESGTECIWQDGLD 198 (394)
T ss_dssp BTTBEEEEEEECTTCBCCC-EEESSCEEEEEEECSCEEEEETTEEEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEEC
T ss_pred CCeeEEEEEEECCCCCcCC-ccCCcceEEEEEEeeEEEEEECCEEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEEccc
Confidence 3568889999999999997 677778899999999987 999999999999999999999999999 9999999998665
No 92
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.35 E-value=3.9e-12 Score=101.04 Aligned_cols=76 Identities=11% Similarity=0.135 Sum_probs=68.1
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEE-EeccCcEEEeCCCCceEEee--CCeEEEEEEEeec
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSS-KLMVDSYTYLPPNFAHSLRA--EGSATLVVFERRY 178 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~-~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~~~y 178 (300)
..|.+..++++||+..+.|.|+.+|++||++|++++.+ +++++ .|++||++++|++.+|+++| +++++++++..++
T Consensus 25 ~~~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i-~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~ 103 (117)
T 2b8m_A 25 EHVQINHIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL-EDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPH 103 (117)
T ss_dssp SSCEEEEEEEETTCBCCCEECSSCEEEEEEESEEEEEE-TTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSC
T ss_pred CceEEEEEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE-CCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 46788899999999888888999999999999999999 99999 99999999999999999998 5678888885444
No 93
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.35 E-value=1.6e-12 Score=124.29 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=71.7
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEeeEE-EEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeec
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGI-YRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDV 295 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~-~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~ 295 (300)
..+.+++.+++||+.++. |.|.+++.+|||+|+|. +.+||+.+++++||++++|++..|++.|+|+++++||+.-|.
T Consensus 101 ~~L~a~~~~l~PG~~~~~-HrH~~~ev~~VleG~G~~~~vdG~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~D~ 178 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPE-HRHSQNAFRFVVEGEGVWTVVNGDPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGLDI 178 (368)
T ss_dssp SSCEEEEEEECTTCEEEE-EEESSCEEEECSSCEEEEEEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEECH
T ss_pred CceEEEEEEECCCCccCc-eecccceEEEEEecceEEEEECCEEEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEecch
Confidence 468899999999999997 67788999999999995 889999999999999999999999999999999999987763
No 94
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.35 E-value=2.7e-12 Score=116.11 Aligned_cols=82 Identities=9% Similarity=-0.003 Sum_probs=69.9
Q ss_pred eeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe--------CCE------------EEEccCCcEEE
Q 022278 211 LLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--------GDS------------WYPVQAGDVLW 270 (300)
Q Consensus 211 l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~--------~g~------------~~~v~~GD~i~ 270 (300)
+.+.+.+..+.+..++++||+..+.|.|+..+|.+|||+|++.+++ +++ ++.+++||+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~ 113 (239)
T 2xlg_A 34 ASCSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIY 113 (239)
T ss_dssp EEEEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEE
T ss_pred eccCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEE
Confidence 3344445677888899999999887544447789999999999999 999 99999999999
Q ss_pred eCCCCceeEEecCCccEEE-EEE
Q 022278 271 MAPFVPQWYAALGKTRTRY-LLY 292 (300)
Q Consensus 271 ~~~~~~H~~~n~G~e~~~f-i~~ 292 (300)
+|+|++|++.|.|++++++ +++
T Consensus 114 iP~g~~H~~~N~~~~~~~~~l~~ 136 (239)
T 2xlg_A 114 SPNHYMHGFVNPTDKTLPIVFVW 136 (239)
T ss_dssp ECTTEEEEEECCSSSCEEEEEEE
T ss_pred ECCCCCEEEEeCCCCCEEEEEEE
Confidence 9999999999999999988 554
No 95
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.34 E-value=7.3e-12 Score=104.48 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=75.1
Q ss_pred ceEEEEecCCC-CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeCCCCceEEee--
Q 022278 90 TLGAYLITPAM-GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPPNFAHSLRA-- 165 (300)
Q Consensus 90 ~~~~~L~sp~~-g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfpa~~~H~~~N-- 165 (300)
.....|.++.. +..++++.++++||+..+.|.|..+|++||++|++++.+ ++++ +.|++||++++|++.+|+++|
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~-~~~~~~~l~~Gd~i~ip~~~~H~~~n~~ 111 (147)
T 2f4p_A 33 VWVKMLVTDENGVFNTQVYDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE-RGKPARILKKGDVVEIPPNVVHWHGAAP 111 (147)
T ss_dssp EEEEEEECCTTCSSSCEEEEEEECTTCEECSEECTTCEEEEEEEEEEEEEE-TTSCCEEEETTCEEEECTTCCEEEEEBT
T ss_pred EEEEEEECCCCCCCcEEEEEEEECCCCccCceECCCceEEEEEeCEEEEEE-CCEEEEEECCCCEEEECCCCcEEeEeCC
Confidence 45566776665 578999999999999888888888999999999999999 9998 999999999999999999998
Q ss_pred CCeEEEEEEEe
Q 022278 166 EGSATLVVFER 176 (300)
Q Consensus 166 ~~~a~vl~v~~ 176 (300)
+++++++++..
T Consensus 112 ~~~~~~l~v~~ 122 (147)
T 2f4p_A 112 DEELVHIGIST 122 (147)
T ss_dssp TBCEEEEEEEC
T ss_pred CCCEEEEEEEc
Confidence 56788888743
No 96
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.34 E-value=1.1e-11 Score=98.07 Aligned_cols=79 Identities=20% Similarity=0.282 Sum_probs=65.9
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCcc
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTR 286 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 286 (300)
..+.+...+ .+.+.+++++||..++. |.|..++.+|||+|++.+.+||+.+.+++||+++++++++|++.|.+ +
T Consensus 28 ~~~~l~~~~---~~~~~~~~~~~g~~~~~-H~h~~~e~~~vl~G~~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~--~ 101 (114)
T 2ozj_A 28 LSMALAQSD---RVQISLFSFADGESVSE-EEYFGDTLYLILQGEAVITFDDQKIDLVPEDVLMVPAHKIHAIAGKG--R 101 (114)
T ss_dssp EEEECEECS---SEEEEEEEEETTSSCCC-BCCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECTTCCBEEEEEE--E
T ss_pred EEEEEEcCC---CceEEEEEECCCCcccc-EECCCCeEEEEEeCEEEEEECCEEEEecCCCEEEECCCCcEEEEeCC--C
Confidence 344455332 25677888999999986 67888999999999999999999999999999999999999999974 5
Q ss_pred EEEEE
Q 022278 287 TRYLL 291 (300)
Q Consensus 287 ~~fi~ 291 (300)
++|++
T Consensus 102 ~~~~~ 106 (114)
T 2ozj_A 102 FKMLQ 106 (114)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 55554
No 97
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.34 E-value=8e-12 Score=103.97 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=67.1
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcE------EEeccCcEEEeCCCCceEEee--CCeEEE
Q 022278 101 GSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVS------SKLMVDSYTYLPPNFAHSLRA--EGSATL 171 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~------~~L~~Gds~yfpa~~~H~~~N--~~~a~v 171 (300)
+..|.+++++++||+..+.|.|. .+|++||++|++++.+ +++. +.|++||++++|++.+|+++| ++++++
T Consensus 40 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i-~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~ 118 (148)
T 2oa2_A 40 GDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQM-GHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKL 118 (148)
T ss_dssp CSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEE-ESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred CCceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEE-CCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 45788999999999988888775 6799999999999999 8888 999999999999999999998 568898
Q ss_pred EEEEee
Q 022278 172 VVFERR 177 (300)
Q Consensus 172 l~v~~~ 177 (300)
+++..+
T Consensus 119 l~i~~~ 124 (148)
T 2oa2_A 119 YSIYAP 124 (148)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 888443
No 98
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.33 E-value=2.4e-12 Score=125.65 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=70.7
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC----CEEEEccCCcEEEeCCCCceeEEecC-CccEEEEEEe
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG----DSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 293 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~----g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 293 (300)
++.+.+++++||+.++.| ||..+|.+|||+|+|++.+. ++.+.|++||++++|+|.+||++|+| ++++++|+..
T Consensus 60 ~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~ 138 (434)
T 2ea7_A 60 NYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLA 138 (434)
T ss_dssp TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEe
Confidence 489999999999999986 88899999999999999873 68999999999999999999999999 8999999987
Q ss_pred ecC
Q 022278 294 DVN 296 (300)
Q Consensus 294 d~n 296 (300)
|.+
T Consensus 139 ~~s 141 (434)
T 2ea7_A 139 IPV 141 (434)
T ss_dssp EES
T ss_pred cCC
Confidence 643
No 99
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.33 E-value=6.6e-12 Score=106.56 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=74.9
Q ss_pred cceeeccCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEE--eeEEEEeCCEEEEc
Q 022278 186 TEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLE--GQGIYRLGDSWYPV 263 (300)
Q Consensus 186 p~~~~~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~--G~G~~~~~g~~~~v 263 (300)
....+-+++++|..+..+|. ..|.|.+.+ .+-+.++++++ |...+.|.|+..+|.+|||+ |+|.+.+||++++|
T Consensus 15 ~~~~iv~~~ei~~~~~~~G~-srR~l~~~~-~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~idge~~~l 90 (157)
T 4h7l_A 15 AMPQMISLSEIEAVACPCGW-AQRAFGHDA-GTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELNGQSYPL 90 (157)
T ss_dssp TSCEEEETTTSCCEEETTEE-EEEESCGGG-CCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEETTEEEEC
T ss_pred cCceEEEhhhCCCccCCCCe-eeEEeEcCC-CCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEECCEEEEe
Confidence 34456679999999988653 445555543 33345555554 45556644445568999999 99999999999999
Q ss_pred cCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 264 QAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 264 ~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
++||++++++|+.|++. | +++||+.
T Consensus 91 ~~GD~v~IPpg~~H~i~--g--~l~~L~I 115 (157)
T 4h7l_A 91 TKLLAISIPPLVRHRIV--G--EATIINI 115 (157)
T ss_dssp CTTEEEEECTTCCEEEE--S--CEEEEEE
T ss_pred CCCCEEEECCCCeEeeE--C--CEEEEEE
Confidence 99999999999999997 3 7999986
No 100
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.33 E-value=6.7e-12 Score=109.35 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=68.4
Q ss_pred eCCCCCcceEEEEEEecCCcc------cCcceeec---cceEEEEEEeeEEEEeCCEE-----EEccCCcEEEeCCCCce
Q 022278 212 LPQAVPFDFNIHIMDFQPGDF------LNVKEVHY---NQHGLLLLEGQGIYRLGDSW-----YPVQAGDVLWMAPFVPQ 277 (300)
Q Consensus 212 ~p~~~~~~~~~~~~tl~PG~~------~p~~~~H~---~eh~~~iL~G~G~~~~~g~~-----~~v~~GD~i~~~~~~~H 277 (300)
+..+....+.+.+.+++||+. .+. |.|. .+|.+|||+|++.+.++|+. +.+++||+++++++.+|
T Consensus 59 ~~~~~~~~l~~~~~~l~PG~~~~E~~~~~~-H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H 137 (190)
T 1x82_A 59 EQEEKEGDLNFATTVLYPGKVGKEFFFTKG-HFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAH 137 (190)
T ss_dssp CCCSCTTCEEEEEEEECCCEETTEECBCCC-BBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEE
T ss_pred cCCCCCCCeEEEEEEECCCcCCCcccCCCC-eECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeE
Confidence 443334467777889999998 555 4554 47999999999999999987 99999999999999999
Q ss_pred eEEecCCccEEEEEEe
Q 022278 278 WYAALGKTRTRYLLYK 293 (300)
Q Consensus 278 ~~~n~G~e~~~fi~~k 293 (300)
++.|+|+++++|++.-
T Consensus 138 ~~~N~g~~~~~~l~v~ 153 (190)
T 1x82_A 138 RTVNIGDEPFIFLAIY 153 (190)
T ss_dssp EEEECSSSCEEEEEEE
T ss_pred EEEECCcccEEEEEEE
Confidence 9999999999998764
No 101
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.32 E-value=5.3e-12 Score=108.19 Aligned_cols=74 Identities=9% Similarity=0.115 Sum_probs=67.2
Q ss_pred ceEEEEEEecC-CcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 219 DFNIHIMDFQP-GDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 219 ~~~~~~~tl~P-G~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+.+-+++++| |+..+.+++|..|+.+|||+|+..++++|+.+.+++||.+|++++.+|.++|.|+++++++.-
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~g~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVCKNKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEETTEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 45566889999 877777778888999999999999999999999999999999999999999999999998863
No 102
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.31 E-value=8.4e-12 Score=118.76 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=71.3
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEE-EeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY-RLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~-~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
..+.+.+++++||+..+. |.|..++.+|||+|+|.+ .+||+.+.+++||+++++++++|++.|.|+++++||+..|
T Consensus 98 ~~l~~~~~~l~PG~~~~~-H~H~~~e~~yVl~G~g~~t~v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d 174 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPS-HRHNQSALRFIVEGKGAFTAVDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLD 174 (354)
T ss_dssp SSCEEEEEEECTTCEEEE-EEESSCEEEEEEECSSCEEEETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEEC
T ss_pred CcEEEEEEEECCCCCcCC-eecCcceEEEEEEEEEEEEEECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEEC
Confidence 467899999999999986 788888999999999999 9999999999999999999999999999999999998875
No 103
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.31 E-value=9.4e-12 Score=112.02 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=76.4
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEE-eCCCCceeEEec
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLW-MAPFVPQWYAAL 282 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~-~~~~~~H~~~n~ 282 (300)
+++..+.|...+ ..|.+++++||..++. |.|.+++.+|||+|++.+++||+.+.+++||++| +++|++|++.|.
T Consensus 22 ~Gv~~~~l~~~~----~~~~~~~~~pg~~~~~-H~H~~~e~~~Vl~G~~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~ 96 (243)
T 3h7j_A 22 NGVRQYSTVRGD----TEVLMSYVPPHTNVEP-HQHKEVQIGMVVSGELMMTVGDVTRKMTALESAYIAPPHVPHGARND 96 (243)
T ss_dssp TSCEEEEEEETT----EEEEEEEECTTEEEEE-ECCSSEEEEEEEESEEEEEETTEEEEEETTTCEEEECTTCCEEEEEC
T ss_pred CCeEEEEEECCC----CEEEEEEECCCCccCC-EECCCcEEEEEEEeEEEEEECCEEEEECCCCEEEEcCCCCcEeeEeC
Confidence 345666554332 3677888999999996 7888999999999999999999999999999998 999999999999
Q ss_pred CCccEEEEEEeecC
Q 022278 283 GKTRTRYLLYKDVN 296 (300)
Q Consensus 283 G~e~~~fi~~kd~n 296 (300)
|+++++++-.|+..
T Consensus 97 ~~~~~~~l~i~r~~ 110 (243)
T 3h7j_A 97 TDQEVIAIDIKRLK 110 (243)
T ss_dssp SSSCEEEEEEEECC
T ss_pred CCCcEEEEEEeccC
Confidence 99999999888664
No 104
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.31 E-value=1.3e-11 Score=104.13 Aligned_cols=86 Identities=14% Similarity=0.209 Sum_probs=73.7
Q ss_pred ceEEEEecCC-CC-CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC---------cEEEeccCcEEEeCCC
Q 022278 90 TLGAYLITPA-MG-SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASG---------VSSKLMVDSYTYLPPN 158 (300)
Q Consensus 90 ~~~~~L~sp~-~g-~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg---------~~~~L~~Gds~yfpa~ 158 (300)
....+++.+. .| ..+.+++++++||+..+.|.|..+|++||++|++++.+ ++ +++.|++||++++|++
T Consensus 25 ~~~~~l~~~~~~g~~~~~~~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~-~~~~~~~~~~~~~~~l~~Gd~i~ip~~ 103 (163)
T 1lr5_A 25 LSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLM-GSSSLKYPGQPQEIPFFQNTTFSIPVN 103 (163)
T ss_dssp EEEEEEECHHHHCCSSEEEEEEEECTTCBCCEEEESSCEEEEEEECCEEEEE-CCSSSSSCCSCEEEEECTTEEEEECTT
T ss_pred cceEEEeccccCCCCcEEEEEEEECCCCcCCCeECCCCeEEEEEeCEEEEEE-CCccccccCccEEEEeCCCCEEEECCC
Confidence 4555565553 44 47999999999999888888899999999999999999 88 8999999999999999
Q ss_pred CceEEeeC---CeEEEEEEEe
Q 022278 159 FAHSLRAE---GSATLVVFER 176 (300)
Q Consensus 159 ~~H~~~N~---~~a~vl~v~~ 176 (300)
.+|+++|. ++++++++..
T Consensus 104 ~~H~~~n~~~~~~~~~l~i~~ 124 (163)
T 1lr5_A 104 DPHQVWNSDEHEDLQVLVIIS 124 (163)
T ss_dssp CCEEEECCCSSSCEEEEEEEE
T ss_pred CcEEeEeCCCCCCEEEEEEEC
Confidence 99999983 4789998853
No 105
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.30 E-value=6.9e-12 Score=122.83 Aligned_cols=75 Identities=23% Similarity=0.307 Sum_probs=69.3
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe----CCEEEEccCCcEEEeCCCCceeEEecC-CccEEEEEEe
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALG-KTRTRYLLYK 293 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G-~e~~~fi~~k 293 (300)
.+.+.+++++||+..+.| ||..+|.+|||+|+|++.+ +++.+.+++||++++|+|.+||++|+| ++++++|+..
T Consensus 85 ~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~ 163 (445)
T 2cav_A 85 DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFA 163 (445)
T ss_dssp TEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEE
T ss_pred cEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEe
Confidence 499999999999999986 8889999999999999986 248999999999999999999999999 8999999877
Q ss_pred e
Q 022278 294 D 294 (300)
Q Consensus 294 d 294 (300)
|
T Consensus 164 ~ 164 (445)
T 2cav_A 164 I 164 (445)
T ss_dssp E
T ss_pred c
Confidence 6
No 106
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.28 E-value=1.9e-11 Score=103.24 Aligned_cols=84 Identities=7% Similarity=0.119 Sum_probs=71.5
Q ss_pred CceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEec
Q 022278 203 GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAAL 282 (300)
Q Consensus 203 g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~ 282 (300)
++.+.++.|+..+.+..+.+.+++++ |+..+ .||..+|.+|||+|+..++++|+.+.++|||.+|+|+|.+|.+.|.
T Consensus 49 ~~~v~i~~l~s~~~~~~~s~g~~~~e-~~~~~--~~~~~eE~~yVLeG~~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~ 125 (151)
T 4axo_A 49 SDVVYTKDLFTLEESPRLGCGMMEMK-ETTFD--WTLNYDEIDYVIDGTLDIIIDGRKVSASSGELIFIPKGSKIQFSVP 125 (151)
T ss_dssp TCCEEEEECSCTTTCSSCEEEEEEEE-EEEEE--EECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CCCEEEEEeecCCCCCcEEEEEEEEc-Ccccc--EeCCCcEEEEEEEeEEEEEECCEEEEEcCCCEEEECCCCEEEEEeC
Confidence 37788888886555668888899998 66654 4667888999999999999999999999999999999999999998
Q ss_pred CCccEEEEE
Q 022278 283 GKTRTRYLL 291 (300)
Q Consensus 283 G~e~~~fi~ 291 (300)
+++++|+
T Consensus 126 --~~a~~l~ 132 (151)
T 4axo_A 126 --DYARFIY 132 (151)
T ss_dssp --EEEEEEE
T ss_pred --CCEEEEE
Confidence 5666665
No 107
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.28 E-value=1.6e-11 Score=101.28 Aligned_cols=82 Identities=18% Similarity=0.147 Sum_probs=66.8
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
..+..+.|...+.. .+.+.+++++|| .. +.||..+|.+|||+|++.+++||+.+.+++||.+++++|.+|.+.|.
T Consensus 42 ~~~~~~~L~~~~~~-~~~~~~~~~~pG-~~--~~h~~~~E~~~VLeG~~~l~~~g~~~~l~~GD~i~~p~g~~h~~~~~- 116 (133)
T 2pyt_A 42 CVGLTDLVTEQDGS-SMAAGFMQWDNA-FF--PWTLNYDEIDMVLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTP- 116 (133)
T ss_dssp CCEEEEEECGGGTC-SSEEEEEEEEEE-EE--EEECSSEEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCEEEEEEE-
T ss_pred ceEEEEEEecCCCC-cEEEEEEEECCC-Cc--cccCCCCEEEEEEECEEEEEECCEEEEECCCcEEEECCCCEEEEEeC-
Confidence 34456666654444 788889999999 33 34556788999999999999999999999999999999999999984
Q ss_pred CccEEEEE
Q 022278 284 KTRTRYLL 291 (300)
Q Consensus 284 ~e~~~fi~ 291 (300)
+++++|+
T Consensus 117 -~~~~~l~ 123 (133)
T 2pyt_A 117 -TSVRFLY 123 (133)
T ss_dssp -EEEEEEE
T ss_pred -CCEEEEE
Confidence 5666665
No 108
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.27 E-value=2.7e-11 Score=105.46 Aligned_cols=81 Identities=10% Similarity=0.108 Sum_probs=68.8
Q ss_pred EecCCCCCcEEEEEEEEcCCCc------CCCCCC---CceEEEEEEECEEEEEEcCCcE-----EEeccCcEEEeCCCCc
Q 022278 95 LITPAMGSHFVMYLANMQENAR------SALPPH---DVERFIFVVQGSAMLTNASGVS-----SKLMVDSYTYLPPNFA 160 (300)
Q Consensus 95 L~sp~~g~~f~~~lv~l~PG~~------~~~~~h---~gEEf~yVLeG~v~l~v~gg~~-----~~L~~Gds~yfpa~~~ 160 (300)
+..|..+..+.+.+++++||+. +..|.| +.+|++||++|++++.+ ++++ +.|++||++++|++.+
T Consensus 58 l~~~~~~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i-~~~~g~~~~~~l~~GD~v~ip~g~~ 136 (190)
T 1x82_A 58 VEQEEKEGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLL-QTPEGDAKWISMEPGTVVYVPPYWA 136 (190)
T ss_dssp ECCCSCTTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEE-ECTTCCEEEEEECTTCEEEECTTCE
T ss_pred ecCCCCCCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEE-cCcCCcEEEEEECCCcEEEECCCCe
Confidence 3666666789999999999987 555655 45899999999999999 7777 9999999999999999
Q ss_pred eEEee--CCeEEEEEEEe
Q 022278 161 HSLRA--EGSATLVVFER 176 (300)
Q Consensus 161 H~~~N--~~~a~vl~v~~ 176 (300)
|++.| +++++++++..
T Consensus 137 H~~~N~g~~~~~~l~v~~ 154 (190)
T 1x82_A 137 HRTVNIGDEPFIFLAIYP 154 (190)
T ss_dssp EEEEECSSSCEEEEEEEE
T ss_pred EEEEECCcccEEEEEEEC
Confidence 99999 67888888843
No 109
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.25 E-value=1.4e-11 Score=96.50 Aligned_cols=70 Identities=17% Similarity=0.266 Sum_probs=58.5
Q ss_pred EEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCC-cEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEee
Q 022278 106 MYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNASG-VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 106 ~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg-~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~ 177 (300)
...+.+.||. ...|.|+. +|++||++|++++.+ +| +++.|++||++++|++.+|+++|.++++++++...
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~i~~~ 101 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF-ADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELS 101 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE-TTSCEEEECTTEEEEECTTCCEEEEEEEEEEEEEEECC
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE-CCCcEEEECCCCEEEECCCCcEeeEeCCCeEEEEEECC
Confidence 3445667775 44678888 999999999999999 88 99999999999999999999999778999988544
No 110
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.25 E-value=5.3e-11 Score=92.60 Aligned_cols=67 Identities=27% Similarity=0.376 Sum_probs=59.4
Q ss_pred ceEEEEEEecCCcccCcceeecc-ceE-EEEEEeeEEEEeC-CEEEEccCCcEEEeCCCCceeEEecCCcc
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYN-QHG-LLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTR 286 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~-eh~-~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 286 (300)
.+.+..++++||..++. |.|.. .+. +||++|++.+.++ |+++.+++||++|++++++|++.|.++..
T Consensus 32 ~~~~~~~~~~~g~~~~~-H~H~~~~e~~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPV-HSHNIEGELNIVVLEGEGEFVGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp SCEEEEEEECTTCEEEE-ECCSSSCEEEEEEEESCEEEECGGGCEEEECTTEEEEEETTSCEEEEESSSEE
T ss_pred CEEEEEEEECCCCcCCc-ccCCCCccEEEEEEeCEEEEEeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 56777899999999986 67775 466 7999999999999 79999999999999999999999998744
No 111
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.24 E-value=6.4e-11 Score=95.15 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=66.6
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEE
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVF 174 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v 174 (300)
...+..+.++++||...+.|.|+..|++||++|++++.+ +++++.|++||.+++|++..|++.| +++++++++
T Consensus 31 ~~~~~~~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i-~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 31 NTPFGGAWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI-NDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CCSSEEEEEEECTTEECCCBCCSSEEEEEEEESEEEEEE-TTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCCcEEEEEEECCCCccCCEecCCeEEEEEEeCEEEEEE-CCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 357889999999999888888999999999999999999 9999999999999999999999998 567777766
No 112
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.24 E-value=2e-11 Score=95.08 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=65.1
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCc-eEE-EEEEECEEEEEEcC-CcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEe
Q 022278 101 GSHFVMYLANMQENARSALPPHDV-ERF-IFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~g-EEf-~yVLeG~v~l~v~g-g~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~ 176 (300)
+..+...+++++||...+.|.|+. .|+ +||++|++++.+ + |+++.|++||++++|++.+|+++|.++++++++..
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~~~~ 107 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG-DGDAVIPAPRGAVLVAPISTPHGVRAVTDMKVLVTIA 107 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC-GGGCEEEECTTEEEEEETTSCEEEEESSSEEEEEEEE
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe-CCCEEEEECCCCEEEeCCCCcEEEEEcCCcEEEEEEC
Confidence 457888999999998877777875 466 899999999999 8 79999999999999999999999976788877743
No 113
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.22 E-value=3.7e-11 Score=107.15 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=68.6
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-CCeEEEEEEEe
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFER 176 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v~~ 176 (300)
..|.+.+++++||+..+.|.|++++++|||+|++++++ +|+++.|++||++++|++.+|+++| .++++++++.-
T Consensus 151 ~~~~~~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i-~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~~v 225 (227)
T 3rns_A 151 PNLVMTIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV-DGKPFIVKKGESAVLPANIPHAVEAETENFKMLLILV 225 (227)
T ss_dssp TTEEEEEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE-TTEEEEEETTEEEEECTTSCEEEECCSSCEEEEEEEE
T ss_pred CCeEEEEEEECCCCccCCEECCCcEEEEEEeEEEEEEE-CCEEEEECCCCEEEECCCCcEEEEeCCCCEEEEEEEE
Confidence 36888999999999888888999999999999999999 9999999999999999999999999 99999988753
No 114
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.22 E-value=7.6e-11 Score=95.73 Aligned_cols=69 Identities=13% Similarity=-0.017 Sum_probs=54.9
Q ss_pred EEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCC-EEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+-.+++.||+..+. |.|.. +|.+|||+|++.+.++| +.+.+++||++++++|++|++.|.+++ ++|++.
T Consensus 45 ~~~~~~~~g~~~~~-H~H~~~~E~~~vl~G~~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 45 VIRAIPGKEAKPTW-HTHTVGFQLFYVLRGWVEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEECC-----CCC-EEECCSCEEEEEEESEEEEEETTTEEEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEecCCCCCCCC-EECCCCcEEEEEEeCEEEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 33444568998886 67776 89999999999999999 999999999999999999999999884 688743
No 115
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.21 E-value=1.7e-11 Score=110.80 Aligned_cols=83 Identities=13% Similarity=0.216 Sum_probs=69.1
Q ss_pred EEEecCCCCCcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEc-------CCc------------EEEeccCcE
Q 022278 93 AYLITPAMGSHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNA-------SGV------------SSKLMVDSY 152 (300)
Q Consensus 93 ~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~-------gg~------------~~~L~~Gds 152 (300)
..+.....+..|.++.++++||+..+.|.|. .+|++|||+|++++++. +++ ++.|++||+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~ 111 (239)
T 2xlg_A 32 DIASCSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQL 111 (239)
T ss_dssp EEEEEEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEE
T ss_pred EEeccCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCE
Confidence 3444455677899999999999888888665 89999999999999971 455 899999999
Q ss_pred EEeCCCCceEEee--CCeEEE-EEEE
Q 022278 153 TYLPPNFAHSLRA--EGSATL-VVFE 175 (300)
Q Consensus 153 ~yfpa~~~H~~~N--~~~a~v-l~v~ 175 (300)
+++|++.+|.++| ++++++ +++.
T Consensus 112 i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 112 IYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred EEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 9999999999999 567888 4443
No 116
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.21 E-value=8.8e-11 Score=109.18 Aligned_cols=86 Identities=14% Similarity=0.172 Sum_probs=69.4
Q ss_pred cceEEEEecCCCCCcEEEEEEEEcCCC-cCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-
Q 022278 89 NTLGAYLITPAMGSHFVMYLANMQENA-RSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA- 165 (300)
Q Consensus 89 ~~~~~~L~sp~~g~~f~~~lv~l~PG~-~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N- 165 (300)
+..++++.++..++.+..+++++.|++ ..+.|.|. ++|++||++|++++++ +|+++.|++||++++|++.+|+++|
T Consensus 202 g~~~~~l~~~~~~~~~~~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i-~~~~~~l~~GD~~~ip~~~~H~~~n~ 280 (337)
T 1y3t_A 202 DQLHRIVAAQKNTDGQFIVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT-DGQEIQLNPGDFLHVPANTVHSYRLD 280 (337)
T ss_dssp TEEEEEEECGGGTTTSCEEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE-TTEEEEECTTCEEEECTTCCEEEEEC
T ss_pred CcEEEEEecccccCCcEEEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE-CCEEEEECCCCEEEECCCCeEEEEEC
Confidence 356777877665543335666776754 44566787 7999999999999999 9999999999999999999999999
Q ss_pred CCeEEEEEEE
Q 022278 166 EGSATLVVFE 175 (300)
Q Consensus 166 ~~~a~vl~v~ 175 (300)
..+++++|+.
T Consensus 281 ~~~~~~l~v~ 290 (337)
T 1y3t_A 281 SHYTKMVGVL 290 (337)
T ss_dssp SSSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 3379999985
No 117
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.21 E-value=3.2e-11 Score=96.96 Aligned_cols=84 Identities=11% Similarity=0.234 Sum_probs=69.0
Q ss_pred EEecCCC-CCcEEEEEEEEcCCCcCC-CCCCCceEEEE-EEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCe
Q 022278 94 YLITPAM-GSHFVMYLANMQENARSA-LPPHDVERFIF-VVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGS 168 (300)
Q Consensus 94 ~L~sp~~-g~~f~~~lv~l~PG~~~~-~~~h~gEEf~y-VLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~ 168 (300)
+++.+.. ...+.+.+++++||+..+ .|.|+..|++| |++|++++.+ +++++.|++||.+++|++.+|+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i-~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~ 93 (125)
T 3cew_A 15 VELHDSLALTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI-DGEKIELQAGDWLRIAPDGKRQISAASDSP 93 (125)
T ss_dssp EECHHHHTCSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE-TTEEEEEETTEEEEECTTCCEEEEEBTTBC
T ss_pred EEEEcccCCCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE-CCEEEEeCCCCEEEECCCCcEEEEcCCCCC
Confidence 4444443 367888999999998876 57788766555 9999999999 9999999999999999999999998 467
Q ss_pred EEEEEEEeec
Q 022278 169 ATLVVFERRY 178 (300)
Q Consensus 169 a~vl~v~~~y 178 (300)
++++++..+-
T Consensus 94 ~~~~~i~~~~ 103 (125)
T 3cew_A 94 IGFLCIQVKA 103 (125)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEcCC
Confidence 8888885443
No 118
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.21 E-value=2.8e-11 Score=104.32 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=65.9
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcC----CcEEEeccCcEEEeCCCCceEEee--CC-eEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNAS----GVSSKLMVDSYTYLPPNFAHSLRA--EG-SATLVVF 174 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g----g~~~~L~~Gds~yfpa~~~H~~~N--~~-~a~vl~v 174 (300)
+.+.+.+++++||+...+|++..+|++||++|++++++ . ++++.|++||+++||+|.+|.+.| ++ +++++++
T Consensus 39 ~~~~~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v-~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v 117 (178)
T 1dgw_A 39 RDYRVLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVL-VNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKF 117 (178)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSEEEEEEEESEEEEEE-EETTEEEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEE-EeCCCcEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEE
Confidence 57999999999999877774567999999999999998 5 788999999999999999999999 44 6888888
Q ss_pred Eee
Q 022278 175 ERR 177 (300)
Q Consensus 175 ~~~ 177 (300)
...
T Consensus 118 ~~~ 120 (178)
T 1dgw_A 118 AIT 120 (178)
T ss_dssp EEC
T ss_pred ECC
Confidence 653
No 119
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.18 E-value=6.6e-11 Score=103.67 Aligned_cols=76 Identities=16% Similarity=0.245 Sum_probs=67.6
Q ss_pred cceEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeC------CE--EEEccCCcEEEeCCCCceeEEecCCccEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLG------DS--WYPVQAGDVLWMAPFVPQWYAALGKTRTR 288 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~------g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 288 (300)
..+.+.+++++||+..+. |.|.. +|.+||++|++.+.++ ++ ++.+++||++|+++|.+|++.|.|+++++
T Consensus 70 ~~~~~~~~~l~pg~~~~~-H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~ 148 (201)
T 1fi2_A 70 LGVSMNRVDFAPGGTNPP-HIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148 (201)
T ss_dssp SSCEEEEEEECTTCEEEE-EECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred CceEEEEEEECCCCCCCC-eECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEE
Confidence 457888999999999986 67775 6999999999999874 55 89999999999999999999999999999
Q ss_pred EEEEee
Q 022278 289 YLLYKD 294 (300)
Q Consensus 289 fi~~kd 294 (300)
+|+.-+
T Consensus 149 ~l~v~~ 154 (201)
T 1fi2_A 149 MVVSFN 154 (201)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 998644
No 120
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.17 E-value=9.2e-11 Score=95.21 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCcEEEEEEE--EcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCC-cEEEeccCcEEEeCCCCceEEee-CCeEEEEEE
Q 022278 101 GSHFVMYLAN--MQENARSALPPHDV-ERFIFVVQGSAMLTNASG-VSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVF 174 (300)
Q Consensus 101 g~~f~~~lv~--l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg-~~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v 174 (300)
+..+...+++ ++||+..+.|.|.. +|++||++|++++.+ ++ +++.|++||++++|++.+|+++| ..+++++++
T Consensus 38 ~g~~~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~-~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l~~ 115 (134)
T 2o8q_A 38 GGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEY-EDIGAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEI 115 (134)
T ss_dssp TTSCEEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEE-TTTEEEEEETTCEEECCTTCCEEEEEECTTCEEEEE
T ss_pred CCceEEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEE-CCcEEEEecCCCEEEECCCCcEEeEeCCCCeEEEEE
Confidence 4455544444 45777777778887 999999999999999 88 99999999999999999999999 556788866
No 121
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.17 E-value=7.6e-11 Score=115.76 Aligned_cols=88 Identities=16% Similarity=0.251 Sum_probs=74.0
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC--C------------------------
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG--D------------------------ 258 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~--g------------------------ 258 (300)
++.+.+.+.. ....+.+++++||+.++. |+|...+.+||++|+|++.+- |
T Consensus 48 ~~~~~~~~~~l~~~gvs~~r~~i~pggl~~P-h~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q 126 (459)
T 2e9q_A 48 TEVWDQDNDEFQCAGVNMIRHTIRPKGLLLP-GFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQ 126 (459)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEEC
T ss_pred EEecCCCChhhccCceEEEEEEEcCCCEecc-eecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccc
Confidence 4445554422 257888999999999986 677899999999999999874 2
Q ss_pred EEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
+.+.|++||++++|+|.+||++|.|++++++|+..|.+
T Consensus 127 ~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~ 164 (459)
T 2e9q_A 127 KIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTR 164 (459)
T ss_dssp CCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESS
T ss_pred eeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCC
Confidence 36799999999999999999999999999999998854
No 122
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.17 E-value=6.4e-11 Score=116.81 Aligned_cols=88 Identities=15% Similarity=0.231 Sum_probs=74.6
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--------------------------
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-------------------------- 258 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g-------------------------- 258 (300)
++.+.+.+.. -.+.+.+++++||+.++. |+|.+.+.+||++|+|++.+..
T Consensus 33 ~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~P-h~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~ 111 (476)
T 1fxz_A 33 IETWNPNNKPFQCAGVALSRCTLNRNALRRP-SYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRH 111 (476)
T ss_dssp EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECCEEEEEECTTCCCC------------------CC
T ss_pred EEeeCCCChhhccCceEEEEEEEcCCCEecc-eecCCceEEEEEecEEEEEEEcCCCcchhhcccccccccccccccccc
Confidence 4446665433 257899999999999986 6788999999999999998763
Q ss_pred -EEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 259 -SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 259 -~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
+.+.|++||++++|+|++||++|+|++++++|+.=|.+
T Consensus 112 qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~ 150 (476)
T 1fxz_A 112 QKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTN 150 (476)
T ss_dssp CCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCC
Confidence 47899999999999999999999999999999887743
No 123
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.17 E-value=7.9e-11 Score=116.62 Aligned_cols=89 Identities=15% Similarity=0.200 Sum_probs=75.1
Q ss_pred EEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC--------------------------
Q 022278 207 QLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-------------------------- 257 (300)
Q Consensus 207 ~~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-------------------------- 257 (300)
.++.+.+.+.. -++.+++++++||+.+.. |+|...+.+||++|+|++.+.
T Consensus 29 ~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~P-h~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~ 107 (493)
T 2d5f_A 29 LIETWNSQHPELQCAGVTVSKRTLNRNGLHLP-SYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQL 107 (493)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------C
T ss_pred EEEEeCCCChhhccCCEEEEEEEeCCCcEeCc-eecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccc
Confidence 34445554322 358999999999999975 677889999999999999877
Q ss_pred ----CEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 258 ----DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 258 ----g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
.+.+.|++||++++|+|.+||++|+|++++++||.=|.+
T Consensus 108 ~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 108 QDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTS 150 (493)
T ss_dssp SEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTT
T ss_pred ccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCc
Confidence 157899999999999999999999999999999987754
No 124
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.17 E-value=1.6e-10 Score=92.10 Aligned_cols=62 Identities=16% Similarity=0.272 Sum_probs=50.9
Q ss_pred cCCCcCCC---CCCCceEEEEEEECEEEEEEcCCcE--EEeccCcEEEeCCCCceEEee-C-C-eEEEEEE
Q 022278 112 QENARSAL---PPHDVERFIFVVQGSAMLTNASGVS--SKLMVDSYTYLPPNFAHSLRA-E-G-SATLVVF 174 (300)
Q Consensus 112 ~PG~~~~~---~~h~gEEf~yVLeG~v~l~v~gg~~--~~L~~Gds~yfpa~~~H~~~N-~-~-~a~vl~v 174 (300)
.+|..... +.|+++|++|||+|++++++ ++++ +.|++||+++||++.+|+++| . + ++.++++
T Consensus 38 ~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~-~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v 107 (112)
T 2opk_A 38 SNGQASPPGFWYDSPQDEWVMVVSGSAGIEC-EGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAV 107 (112)
T ss_dssp ESSCCCCTTCCBCCSSEEEEEEEESCEEEEE-TTCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred eCCccCCCCccccCCccEEEEEEeCeEEEEE-CCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEE
Confidence 34544433 46899999999999999999 8888 999999999999999999998 3 2 4555555
No 125
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.16 E-value=7.8e-11 Score=92.76 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=59.6
Q ss_pred EEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 224 IMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 224 ~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+.+++||.. + .+|..+|.+|||+|++.+.+| |+.+.+++||++++++|.+|.+.|.++.+..|++|
T Consensus 35 ~~~~~pg~~-~--~hH~~~E~~~Vl~G~~~~~i~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~~ 101 (101)
T 1o5u_A 35 IWEKEVSEF-D--WYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF 101 (101)
T ss_dssp EEEECSEEE-E--EECSSCEEEEEEEEEEEEEETTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEC
T ss_pred EEEeCCCcc-c--ccCCceEEEEEEeCEEEEEECCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEEEC
Confidence 678889874 3 247788999999999999999 99999999999999999999999999999999876
No 126
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.16 E-value=1.4e-10 Score=94.50 Aligned_cols=73 Identities=8% Similarity=0.148 Sum_probs=61.3
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 175 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~ 175 (300)
..+...+.+..||... .+.|.++||+|||+|++++++.+|+.+.|++||+++||++.+|+|+|.+.+|-+++.
T Consensus 47 g~~~~g~w~~~pG~~~-~~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~ 119 (123)
T 3bcw_A 47 GKVESGVWESTSGSFQ-SNTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFV 119 (123)
T ss_dssp TTEEEEEEEEEEEEEE-CCCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred CCEEEEEEEECCCcee-eEcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEE
Confidence 4678888899998654 355667999999999999997567889999999999999999999997767665553
No 127
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.15 E-value=6.9e-11 Score=117.24 Aligned_cols=90 Identities=12% Similarity=0.134 Sum_probs=76.7
Q ss_pred EEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC-------------------------
Q 022278 207 QLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD------------------------- 258 (300)
Q Consensus 207 ~~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g------------------------- 258 (300)
.+..+.+.+.. ..+.+.+++++||+.+.. |+|.+.+.+||++|+|++.+-.
T Consensus 32 ~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lP-h~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~ 110 (510)
T 3c3v_A 32 YIETWNPNNQEFECAGVALSRLVLRRNALRRP-FYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRR 110 (510)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC------------
T ss_pred eEEEeCCCCcccccCcEEEEEEEECCCCCccc-eecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccc
Confidence 45556665532 368999999999999876 6778999999999999998764
Q ss_pred ---------------EEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecCC
Q 022278 259 ---------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 259 ---------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr 297 (300)
+.+.|++||+|++|+|++||++|.|++++++|+..|.+-
T Consensus 111 ~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 111 LQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp --------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred ccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 247999999999999999999999999999999998763
No 128
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=99.15 E-value=4.4e-11 Score=99.94 Aligned_cols=90 Identities=14% Similarity=0.022 Sum_probs=69.9
Q ss_pred ccCCCCCCcccC----CceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEE--EEcc
Q 022278 191 GSTDKQPLLETP----GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW--YPVQ 264 (300)
Q Consensus 191 ~~~~d~~~~~~~----g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~--~~v~ 264 (300)
-+.++++|++.+ .+++..+.|...+. ....+++++++||+.+|. |+|..+|.+|||+|+..+..++.. ++++
T Consensus 12 i~~~~~~W~~~p~~~~~~Gv~~~~L~~~~~-~g~~~~~~~~~pG~~~p~-H~H~~~ee~~VL~G~~~~~~g~~~~~~~~~ 89 (145)
T 2o1q_A 12 VQMDQVDWKPFPAAFSTGGIRWKLLHVSPE-MGSWTAIFDCPAGSSFAA-HVHVGPGEYFLTKGKMDVRGGKAAGGDTAI 89 (145)
T ss_dssp CCGGGSCCEECCGGGEESCCEEEEEEEETT-TTEEEEEEEECTTEEECC-EEESSCEEEEEEEEEEEETTCGGGTSEEEE
T ss_pred EccccCccEeCCcccCCCCcEEEEeeECCC-cccEEEEEEECCCCCCCc-cCCCCCEEEEEEEeEEEEcCCCEecceEeC
Confidence 346678888885 45667777743221 123578999999999997 777777789999999998776655 8999
Q ss_pred CCcEEEeCCCCcee-EEec
Q 022278 265 AGDVLWMAPFVPQW-YAAL 282 (300)
Q Consensus 265 ~GD~i~~~~~~~H~-~~n~ 282 (300)
+||++++|+|..|+ ..+.
T Consensus 90 ~Gd~~~~p~g~~H~p~~~~ 108 (145)
T 2o1q_A 90 APGYGYESANARHDKTEFP 108 (145)
T ss_dssp SSEEEEECTTCEESCCEEE
T ss_pred CCEEEEECcCCccCCeECC
Confidence 99999999999999 5443
No 129
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.14 E-value=1.1e-10 Score=112.65 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=69.8
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe----CCEEEEccCCcE------EEeCCCCceeEEecC-CccE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDV------LWMAPFVPQWYAALG-KTRT 287 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~----~g~~~~v~~GD~------i~~~~~~~H~~~n~G-~e~~ 287 (300)
++.+.+++++||+..+. |+|..+|.+||++|+|++.+ +...+.|++||+ +++|+|..||++|+| ++++
T Consensus 51 ~~s~~~~~l~pgg~~~p-h~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l 129 (397)
T 2phl_A 51 DYRLVEFRSKPETLLLP-QQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDL 129 (397)
T ss_dssp TCEEEEEEECSSEEEEE-EEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCE
T ss_pred cEEEEEEEECCCcCccC-EecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCe
Confidence 48999999999999875 67888899999999999998 678999999999 999999999999999 8999
Q ss_pred EEEEEeec
Q 022278 288 RYLLYKDV 295 (300)
Q Consensus 288 ~fi~~kd~ 295 (300)
++|+..|.
T Consensus 130 ~~i~~~~~ 137 (397)
T 2phl_A 130 RIIQLAMP 137 (397)
T ss_dssp EEEEEEEE
T ss_pred EEEEeecC
Confidence 99988764
No 130
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.13 E-value=4.1e-11 Score=93.87 Aligned_cols=75 Identities=9% Similarity=0.156 Sum_probs=62.7
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCce-EEEEEEECEEEEEEcCCc--EEEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 101 GSHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASGV--SSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gE-Ef~yVLeG~v~l~v~gg~--~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
+.++.+..++++||+.+..|.|+.+ +++|+++|++++...||+ ...|++||++++|+|.+|.++| +++++++.|+
T Consensus 14 ~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 3478889999999999999988776 444568999999874554 5799999999999999999999 6789999885
No 131
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.12 E-value=1.7e-10 Score=102.41 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=68.2
Q ss_pred Eee-CCC--CCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEeCCCCceeEEecCCc
Q 022278 210 KLL-PQA--VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 210 ~l~-p~~--~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e 285 (300)
.|+ |.. .+.++.+-+..+.||...|. |+|..||.||||+|++.++++ |+|.++++||++++++|++|+++ ++++
T Consensus 119 elvGP~g~~~s~~l~lG~v~l~PG~~yP~-HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~r-t~de 196 (217)
T 4b29_A 119 ELAGPSGHFLTQSLRVTVGYWGPGLDYGW-HEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMT-TLTD 196 (217)
T ss_dssp EEEETTSSEECSSCEEEEEEECSSCEEEE-EECSSEEEEEEEEECEEEEETTSCCEEECTTCEEEECTTCCEEEE-CCSS
T ss_pred EEECCCCCCCCCeEEEEEEEECCCCcCCC-CCCCCceEEEEEeCCEEEEECCCCEEecCCCCEEEcCCCCceeEE-ECCc
Confidence 344 643 34678888999999999997 788899999999999999999 99999999999999999999998 6899
Q ss_pred cEE
Q 022278 286 RTR 288 (300)
Q Consensus 286 ~~~ 288 (300)
|+.
T Consensus 197 Pll 199 (217)
T 4b29_A 197 PIL 199 (217)
T ss_dssp CEE
T ss_pred cEE
Confidence 995
No 132
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.12 E-value=1.2e-10 Score=91.68 Aligned_cols=64 Identities=8% Similarity=0.075 Sum_probs=53.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcC-CcEEEeccCcEEEeCCCCceEEeeCCeEEEEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g-g~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v 174 (300)
+.+..||... .+ |+.+|++|||+|++++++ + |+++.|++||+++||++.+|+++|.++.+.+++
T Consensus 35 ~~~~~pg~~~-~h-H~~~E~~~Vl~G~~~~~i-~~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv 99 (101)
T 1o5u_A 35 IWEKEVSEFD-WY-YDTNETCYILEGKVEVTT-EDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYN 99 (101)
T ss_dssp EEEECSEEEE-EE-CSSCEEEEEEEEEEEEEE-TTCCEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred EEEeCCCccc-cc-CCceEEEEEEeCEEEEEE-CCCCEEEECCCCEEEECCCCcEEEEeCCCeeEEEE
Confidence 4566776432 23 788999999999999999 7 999999999999999999999999666666655
No 133
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.12 E-value=2e-10 Score=101.99 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=77.1
Q ss_pred eEEEEecCCC---CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-C
Q 022278 91 LGAYLITPAM---GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-E 166 (300)
Q Consensus 91 ~~~~L~sp~~---g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~ 166 (300)
-...|+.|.- ..++...++.++||...+.|.|..||++|||+|++++.+++++...+++||++++|+|++|.+++ +
T Consensus 116 a~~elvGP~g~~~s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 116 GWFELAGPSGHFLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp EEEEEEETTSSEECSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEETTSCCEEECTTCEEEECTTCCEEEECCS
T ss_pred eEEEEECCCCCCCCCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEECCCCEEecCCCCEEEcCCCCceeEEECC
Confidence 3455666632 46899999999999998889999999999999999999933899999999999999999999998 7
Q ss_pred CeEEEEEEEeeccccCC
Q 022278 167 GSATLVVFERRYASLEN 183 (300)
Q Consensus 167 ~~a~vl~v~~~y~~~~g 183 (300)
+++..+|+ .+..|+..
T Consensus 196 ePllalwv-W~G~~~~~ 211 (217)
T 4b29_A 196 DPILTLVL-WRGAGLGD 211 (217)
T ss_dssp SCEEEEEE-EESTTTTC
T ss_pred ccEEEEEE-EeCCCCCC
Confidence 88877776 35666543
No 134
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.08 E-value=4.7e-10 Score=89.31 Aligned_cols=69 Identities=13% Similarity=0.027 Sum_probs=56.2
Q ss_pred EEEEEecCCcccCc--ceeeccceEEEEEEeeEEEEeCCEE--EEccCCcEEEeCCCCceeEEecCCc-cEEEEE
Q 022278 222 IHIMDFQPGDFLNV--KEVHYNQHGLLLLEGQGIYRLGDSW--YPVQAGDVLWMAPFVPQWYAALGKT-RTRYLL 291 (300)
Q Consensus 222 ~~~~tl~PG~~~p~--~~~H~~eh~~~iL~G~G~~~~~g~~--~~v~~GD~i~~~~~~~H~~~n~G~e-~~~fi~ 291 (300)
+.++. .+|...+. +++|..+|.+|||+|++.++++|+. +.+++||.+++|++++|.+.|+|++ +..+|+
T Consensus 33 i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~ 106 (112)
T 2opk_A 33 IERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLA 106 (112)
T ss_dssp EEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEE
T ss_pred EEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEE
Confidence 33443 45655544 2567777899999999999999999 9999999999999999999999986 565554
No 135
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.07 E-value=3.3e-10 Score=99.19 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=65.8
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcC-----Cc--EEEeccCcEEEeCCCCceEEee--CCeEE
Q 022278 101 GSHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNAS-----GV--SSKLMVDSYTYLPPNFAHSLRA--EGSAT 170 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~g-----g~--~~~L~~Gds~yfpa~~~H~~~N--~~~a~ 170 (300)
+..+.+.+++++||+..+.|.|.. +|++||++|++++.+.+ ++ ++.|++||.++||++..|.++| +++++
T Consensus 69 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~ 148 (201)
T 1fi2_A 69 TLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148 (201)
T ss_dssp TSSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred cCceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEE
Confidence 346899999999999888887875 89999999999998832 56 8999999999999999999998 57899
Q ss_pred EEEEEe
Q 022278 171 LVVFER 176 (300)
Q Consensus 171 vl~v~~ 176 (300)
++++..
T Consensus 149 ~l~v~~ 154 (201)
T 1fi2_A 149 MVVSFN 154 (201)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 888843
No 136
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=99.07 E-value=4.5e-09 Score=96.15 Aligned_cols=182 Identities=17% Similarity=0.222 Sum_probs=121.8
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEEcC-C--cEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccC--C----
Q 022278 113 ENARSALPPHDVERFIFVVQGSAMLTNAS-G--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLE--N---- 183 (300)
Q Consensus 113 PG~~~~~~~h~gEEf~yVLeG~v~l~v~g-g--~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~--g---- 183 (300)
|+.+...|..+.|||+|+++|.+.+.+.+ | +...|++||.+.+|++++|+-...+.+..|+++++=.+.+ +
T Consensus 40 pN~R~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gLviE~~R~~~~~D~l~wy 119 (286)
T 2qnk_A 40 PNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLETELDGLRYY 119 (286)
T ss_dssp CBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEECCCTTCCEEEEEE
T ss_pred CCcCccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcccCCeEEEEEeecCCCCCccceEEE
Confidence 44456667567899999999999999844 3 2689999999999999999987767788888876543311 1
Q ss_pred ---C------------------------------------CcceeeccCCCCCCcccCC----ceeEEE-Eee-------
Q 022278 184 ---H------------------------------------ITEQIVGSTDKQPLLETPG----EVFQLR-KLL------- 212 (300)
Q Consensus 184 ---~------------------------------------~p~~~~~~~~d~~~~~~~g----~~~~~~-~l~------- 212 (300)
. .|+.+.. -|+-+.+. .-+.++ |+.
T Consensus 120 c~~c~~~~~e~~f~~~dl~~ql~~~~~~f~~~~~~rtc~p~~~~~~~----~~p~~~~~~~~~~pf~Lk~Wl~~h~~ei~ 195 (286)
T 2qnk_A 120 VGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLK----EPPFPLSTRSIMEPMSLDAWLDSHHRELQ 195 (286)
T ss_dssp STTSSSEEEEEEECCSSHHHHHHHHHHHHHTSHHHHHSCCCGGGSCS----SCSSCCCCCCCCCCEEHHHHHHHTHHHHH
T ss_pred cCCCCCEEEEEEEEEechHHhhHHHHHHHhcCcccccCCCChhhccc----CCCCCCccccccCCcCHHHHHHhhhHHHh
Confidence 0 0111110 01111111 111122 121
Q ss_pred CC---CCC-cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEE
Q 022278 213 PQ---AVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTR 288 (300)
Q Consensus 213 p~---~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 288 (300)
.. ++. ..+-..++-+-+|.+... +.-. +-=+++|+|+-.+++||..|.+++||.+.++++..|.+....+.-+-
T Consensus 196 s~~~~sLFg~~~eteV~l~G~Ges~~~-~~~~-d~wiWqLEGss~Vt~~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L 273 (286)
T 2qnk_A 196 AGTPLSLFGDTYETQVIAYGQGSSEGL-RQNV-DVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVAL 273 (286)
T ss_dssp TTCCEESSCTTSSEEEEEECSEEEEEC-CCSS-CEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred cCCccccccCCCceEEEEEcCCccccc-cCcC-cEEEEEEcCceEEEECCeEEeccCCCEEEecCCCeEEEEecCCeEEE
Confidence 11 121 234455666888887654 2222 55589999999999999999999999999999999999987777776
Q ss_pred EEEEeecCCCCC
Q 022278 289 YLLYKDVNRNPL 300 (300)
Q Consensus 289 fi~~kd~nr~~~ 300 (300)
+|.-+.-++.|+
T Consensus 274 ~I~~~p~~~~~~ 285 (286)
T 2qnk_A 274 SVTQDPACKKPL 285 (286)
T ss_dssp EEEECGGGCCSC
T ss_pred EEEECccccCCC
Confidence 666666555553
No 137
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.06 E-value=1e-09 Score=83.99 Aligned_cols=60 Identities=13% Similarity=0.231 Sum_probs=54.4
Q ss_pred cCCCCCCCc-eEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEe
Q 022278 116 RSALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 116 ~~~~~~h~g-EEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~ 176 (300)
..+.|.|+. .|++||++|++++.+ +++++.|++||++++|++.+|+++|.++++++++..
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~-~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~i~~ 101 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAF-RDQNITLQAGEMYVIPKGVEHKPMAKEECKIMIIEP 101 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEEC-SSCEEEEETTEEEEECTTCCBEEEEEEEEEEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEE-CCEEEEEcCCCEEEECCCCeEeeEcCCCCEEEEEEc
Confidence 456677887 999999999999999 999999999999999999999999977888888753
No 138
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=99.04 E-value=7.4e-09 Score=93.42 Aligned_cols=166 Identities=12% Similarity=0.069 Sum_probs=113.7
Q ss_pred EEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceE-Eee--CCeE
Q 022278 93 AYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHS-LRA--EGSA 169 (300)
Q Consensus 93 ~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~-~~N--~~~a 169 (300)
+.|.-+..|+ ....|.++|+-..+..-|..+--+|||+|++. + |+ ..|.+++|.++|+|+.-- |+- ++++
T Consensus 82 RlLs~~d~Ga--STl~V~fpp~~~~P~Gi~~ad~E~fVL~G~i~--~-G~--~~l~~h~Y~f~PaGV~~~~~kv~~~~g~ 154 (303)
T 2qdr_A 82 RLLTWHDSGA--STSRVVLPPKFEAPSGIFTADLEIFVIKGAIQ--L-GE--WQLNKHSYSFIPAGVRIGSWKVLGGEEA 154 (303)
T ss_dssp EEEEECTTSC--EEEEEEECTTCEECCBEESSCEEEEEEESEEE--E-TT--EEECTTEEEEECTTCCBCCEEEETTSCE
T ss_pred eecccCCCCc--ceEEEEecCCCCCCCcccccceEEEEEEeEEE--e-CC--EEecCCceEEecCCCccCceeecCCCCc
Confidence 3344455554 34577889987665542332333999999887 5 55 579999999999998664 444 8899
Q ss_pred EEEEEEee-----ccccCCCCcce------eeccCCCCCCcccC--C-ceeEEEEeeCCCCCcceEEEEEEecCCcccCc
Q 022278 170 TLVVFERR-----YASLENHITEQ------IVGSTDKQPLLETP--G-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNV 235 (300)
Q Consensus 170 ~vl~v~~~-----y~~~~g~~p~~------~~~~~~d~~~~~~~--g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~ 235 (300)
++||+..= |..++...|.+ .+-+.+.++|...+ + ..+..++|-.+.. ....+++.+.||.-...
T Consensus 155 ~iL~fe~g~~pl~y~~a~~d~P~Ar~~d~I~v~Ds~~L~W~~t~~p~f~~~~~K~Lr~D~~--G~~TrLlr~~Pg~dt~~ 232 (303)
T 2qdr_A 155 EILWMENGSVPLEYKYAQEDHPDARLSDFIPALDSKLLPWGKADTVQFVQANKKWLRKDIN--GGGVWLLAILPHFDNKY 232 (303)
T ss_dssp EEEEEECSSSCCCEECCSSCCTTCCGGGCEEEEEGGGSCCEECSSSTTCSEEEEEEEECTT--SCEEEEEEECSSEECCS
T ss_pred EEEEEecCCccccccccccCCcchhhcccceecccccCCcccCCCCCccHHHHHHhhcCCC--CCeEEEEEECCCCCCCC
Confidence 99999321 22222223332 22244456666544 3 4445555654333 55677899999988888
Q ss_pred ceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCcee
Q 022278 236 KEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQW 278 (300)
Q Consensus 236 ~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~ 278 (300)
.-+|..-|+.|+|+|.. .+|++.|-+|+++|+
T Consensus 233 v~iHdy~EEvY~LeG~~-----------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 233 QMIQPYNEEGYCLTGYC-----------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EEEECSCEEEEEEEEEE-----------EETTEEEETTEEEEE
T ss_pred ceeeccceeEEEEeeec-----------cCceeeEcCCCCccC
Confidence 88898888999999976 669999999999998
No 139
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=99.04 E-value=3e-08 Score=90.84 Aligned_cols=173 Identities=15% Similarity=0.129 Sum_probs=123.0
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEe-c-c--------CcEEEeCCCCceEEeeCCeEEEE
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKL-M-V--------DSYTYLPPNFAHSLRAEGSATLV 172 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L-~-~--------Gds~yfpa~~~H~~~N~~~a~vl 172 (300)
.+...+++|++|........+.|-.+..|.|.+++++ +|+++.+ . . .|++|+|.+..-.+.+..++++.
T Consensus 28 y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~-~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~~ 106 (270)
T 2qjv_A 28 YVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXA-ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLELA 106 (270)
T ss_dssp SCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEE-TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEEE
T ss_pred EeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEE-CCEEEeccccccccccCCCCcEEEECCCCEEEEEecCCceEE
Confidence 4566788899998776666677888999999999999 9999977 3 2 49999999999899987789999
Q ss_pred EEEeeccccCCCCcceeeccCCCCCCcccC-C-ceeEEEEeeCCCCCcceEEEEEEecCCccc---Ccceeeccc-----
Q 022278 173 VFERRYASLENHITEQIVGSTDKQPLLETP-G-EVFQLRKLLPQAVPFDFNIHIMDFQPGDFL---NVKEVHYNQ----- 242 (300)
Q Consensus 173 ~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~-g-~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~---p~~~~H~~e----- 242 (300)
+...+. ++.-|..++. .+|++..... | ...+++.+++.+...+..+-..+|.||+.- |. |+|...
T Consensus 107 v~sAp~---~~~~p~r~i~-~~d~~~~~rG~g~n~R~V~~i~~~~~~a~~LlvgEv~tpgG~WSSyPp-HkHd~~~~~~e 181 (270)
T 2qjv_A 107 VCSAPG---FGELPVRLIS-PQEVGVEHRGXGRNQRLVHNILPDSQLADSLLVVEVYTNAGATSSWPA-HXHDTAVEGQE 181 (270)
T ss_dssp EEEEEC---CSCCCCEEEC-GGGSEEEEESSGGGCEEEEEEECTTSCCSSCEEEEEEECTTCEESCSC-EECEEEETTTE
T ss_pred EEeeec---CCcCCcEEEC-HHHCCeEeccCccchhhhhhhcCCCCCcceEEEEEEEcCCCccccCCC-cccccccCccc
Confidence 986654 4433555554 3455555443 2 333555666544434433334457788864 75 677652
Q ss_pred ----eEEEE-EE---eeEEEEe------CCEEEEccCCcEEEeCCCCceeEEec
Q 022278 243 ----HGLLL-LE---GQGIYRL------GDSWYPVQAGDVLWMAPFVPQWYAAL 282 (300)
Q Consensus 243 ----h~~~i-L~---G~G~~~~------~g~~~~v~~GD~i~~~~~~~H~~~n~ 282 (300)
|+||. +. |-|.-++ .++.+.|+-||++.+|+|- |...+.
T Consensus 182 ~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp~~a~ 234 (270)
T 2qjv_A 182 TYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HPVATI 234 (270)
T ss_dssp EECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CCEEEC
T ss_pred ccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CCCcCC
Confidence 78866 43 5666656 5789999999999999998 974443
No 140
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=1.1e-09 Score=93.13 Aligned_cols=97 Identities=10% Similarity=0.083 Sum_probs=76.3
Q ss_pred cCCCCCCcccC--CceeEEEEee-CCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcE
Q 022278 192 STDKQPLLETP--GEVFQLRKLL-PQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDV 268 (300)
Q Consensus 192 ~~~d~~~~~~~--g~~~~~~~l~-p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~ 268 (300)
+.++++|++.. ++++..+.|. ..+. ...+++++++||+.+|. |+|...+.+|||+|+..|..+| ..+++||+
T Consensus 13 ~~~~~~W~~~~~~~~Gv~~~~L~~d~~~--g~~v~lvr~~pG~~~p~-H~H~g~ee~~VL~G~~~~~e~~--~~~~~Gd~ 87 (159)
T 3ebr_A 13 DGNDTPWMPFAPYSNDVMVKYFKIDPVR--GETITLLKAPAGMEMPR-HHHTGTVIVYTVQGSWRYKEHD--WVAHAGSV 87 (159)
T ss_dssp CGGGSCCEECTTTCSSSEEEEEEEETTT--TEEEEEEEECSSCBCCC-EEESSCEEEEEEESCEEETTSS--CCBCTTCE
T ss_pred cCCcCCcEeCCCCCCCEEEEEeeEcCCC--CeEEEEEEECCCCCccc-ccCCCCEEEEEEEeEEEEeCCC--eEECCCeE
Confidence 46778888843 3566777764 2222 36788999999999997 6787788899999999875443 48899999
Q ss_pred EEeCCCCceeEEec--CCccEEEEEEe
Q 022278 269 LWMAPFVPQWYAAL--GKTRTRYLLYK 293 (300)
Q Consensus 269 i~~~~~~~H~~~n~--G~e~~~fi~~k 293 (300)
++.|+|..|+..+. +++++..+.-|
T Consensus 88 ~~~P~g~~H~~~~~~~~~e~~~~~~~~ 114 (159)
T 3ebr_A 88 VYETASTRHTPQSAYAEGPDIITFNIV 114 (159)
T ss_dssp EEECSSEEECEEESSSSSSCEEEEEEE
T ss_pred EEECCCCcceeEeCCCCCCCEEEEEEe
Confidence 99999999999999 78888766644
No 141
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.02 E-value=4.4e-10 Score=87.75 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=54.2
Q ss_pred EEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCC-EEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 224 IMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGD-SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 224 ~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g-~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+++.||. .+. |.|.. +|.+|||+|++.+.++| +.+.+++||++++++|++|++.|. ++++++++
T Consensus 32 ~~~~~~g~-~~~-H~H~~~~E~~~Vl~G~~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 32 HLVKLLGD-YGW-HTHGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEE-CCC-BCC--CCEEEEESSSCEEEEETTSCEEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEECCCC-Ccc-eeCCCCCEEEEEEeCEEEEEECCCcEEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 35667886 454 67777 89999999999999999 999999999999999999999995 46777765
No 142
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.98 E-value=1.3e-09 Score=106.86 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=74.6
Q ss_pred EEEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe--CC-----------------------
Q 022278 207 QLRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL--GD----------------------- 258 (300)
Q Consensus 207 ~~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~--~g----------------------- 258 (300)
.++.+.+.+.. ..+.+.+++++||+.++. |+|...+.+||++|+|++.+ .|
T Consensus 34 ~~e~~d~~~~~l~~~gvs~~R~~i~P~gl~~P-h~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~ 112 (465)
T 3qac_A 34 LTEVWDSNEQEFRCAGVSVIRRTIEPHGLLLP-SFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQ 112 (465)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEEECTTCCCCC------------------
T ss_pred EEEEECCCChhhcccceEEEEEEEcCCcCccc-EEcCCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccc
Confidence 34556665422 368889999999999997 66688899999999998884 21
Q ss_pred -----------------EEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecCC
Q 022278 259 -----------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 259 -----------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr 297 (300)
+.+.+++||++++|+|+.||++|+|++|+++|+.=|.+-
T Consensus 113 ~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 113 GSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp ------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred cccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 246899999999999999999999999999999988753
No 143
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.97 E-value=5.2e-10 Score=87.34 Aligned_cols=73 Identities=8% Similarity=0.098 Sum_probs=61.4
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCC---cEEEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTNASG---VSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg---~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
..+....++++||++.+.|.|.. ++++||++|+++++. ++ ++..|++||++|+|+|..|++.| ++++.+|-|.
T Consensus 15 ~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~-~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeVE 93 (98)
T 3lag_A 15 DEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA-PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC-TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEEE
T ss_pred CeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe-CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEEE
Confidence 46888899999999999997765 577788899999998 55 34578999999999999999999 7888888874
No 144
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.96 E-value=2.1e-09 Score=82.22 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=55.7
Q ss_pred eEEEEEEecCCcccCcceeecc-ceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYN-QHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~-eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
..+++..+. +..+. |.|.. .+.+||++|++.+.++|+.+.+++||++++++|++|++.|.+ +.++++.
T Consensus 31 ~~~~~~~~~--~~~~~-H~H~~~~e~~~v~~G~~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 31 YQFKLVKVE--GEFVW-HEHADTDEVFIVMEGTLQIAFRDQNITLQAGEMYVIPKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp EEEEEEEEE--EECCC-BCCTTCCEEEEEEESEEEEECSSCEEEEETTEEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CEEEEEEEC--CCCCc-eeCCCCcEEEEEEeCEEEEEECCEEEEEcCCCEEEECCCCeEeeEcCC--CCEEEEE
Confidence 344455554 45665 67776 889999999999999999999999999999999999999984 6666654
No 145
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.94 E-value=4.1e-09 Score=90.11 Aligned_cols=105 Identities=16% Similarity=0.154 Sum_probs=77.9
Q ss_pred ceeeccCCCCCCcccCC--ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEcc
Q 022278 187 EQIVGSTDKQPLLETPG--EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQ 264 (300)
Q Consensus 187 ~~~~~~~~d~~~~~~~g--~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~ 264 (300)
..+.-+.++++|++..+ +++.++.|.-.. .....++++.++||+.+|. |.|...+..|||+|.-.+. ++..++++
T Consensus 9 ~~v~v~~~~~~W~~~~~~~~GV~~~~L~~~~-~~g~~v~lvr~~pG~~~p~-H~H~g~ee~~VL~G~f~~~-~~~~~~~~ 85 (165)
T 3cjx_A 9 KLLTVDTTAHPFLKALGGHEGTDIFPLFMDP-YNGLMVMRASFAPGLTLPL-HFHTGTVHMYTISGCWYYT-EYPGQKQT 85 (165)
T ss_dssp SCEEEETTSSCCBCSGGGCTTEEEEEEEEET-TTTEEEEEEEECTTCBCCE-EEESSCEEEEEEESEEEET-TCTTSCEE
T ss_pred ceEEEccccCCcEECCCCCCCEEEEEeEeCC-CCCcEEEEEEECCCCcCCc-ccCCCCEEEEEEEEEEEEC-CCceEEEC
Confidence 34556788899998752 456667664221 1235688999999999996 7888888999999998873 22257889
Q ss_pred CCcEEEeCCCCceeEEecC--CccEEEEEEee
Q 022278 265 AGDVLWMAPFVPQWYAALG--KTRTRYLLYKD 294 (300)
Q Consensus 265 ~GD~i~~~~~~~H~~~n~G--~e~~~fi~~kd 294 (300)
+||+++.|+|..|+..+.. ++++..|+-|+
T Consensus 86 aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 86 AGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp TTEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred CCeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 9999999999999999975 33664444443
No 146
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.93 E-value=3.8e-09 Score=100.11 Aligned_cols=84 Identities=10% Similarity=-0.015 Sum_probs=62.9
Q ss_pred EEEEee-CCCCCcceEEEEEEecCCcccCc--ceeec-cceEEEEEEeeEEEEeCC-----EEEEccCCcEEEeCCCCce
Q 022278 207 QLRKLL-PQAVPFDFNIHIMDFQPGDFLNV--KEVHY-NQHGLLLLEGQGIYRLGD-----SWYPVQAGDVLWMAPFVPQ 277 (300)
Q Consensus 207 ~~~~l~-p~~~~~~~~~~~~tl~PG~~~p~--~~~H~-~eh~~~iL~G~G~~~~~g-----~~~~v~~GD~i~~~~~~~H 277 (300)
..+.++ +...+..+.+. .++.|++..+. .|.|. .+|.+|||+|++.++++| +++.+++||+++++++++|
T Consensus 34 ~~~~l~~~~~~~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H 112 (350)
T 1juh_A 34 LYRFYVTGPSSGYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTH 112 (350)
T ss_dssp EEEEEECHHHHTTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEE
T ss_pred eEEEEecCCCCCCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcE
Confidence 344544 43333334333 45556665442 35555 778999999999999999 9999999999999999999
Q ss_pred eEEecCCccEEEEEE
Q 022278 278 WYAALGKTRTRYLLY 292 (300)
Q Consensus 278 ~~~n~G~e~~~fi~~ 292 (300)
++.|.|+++ ++|+.
T Consensus 113 ~~~n~~~~~-~~l~v 126 (350)
T 1juh_A 113 TFQIQDPDT-EMTGV 126 (350)
T ss_dssp EEEECSTTE-EEEEE
T ss_pred EEEeCCCCC-EEEEE
Confidence 999999987 77764
No 147
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.93 E-value=6.1e-09 Score=88.27 Aligned_cols=78 Identities=15% Similarity=0.183 Sum_probs=60.6
Q ss_pred EEecCCCCCcEEEEEEEEcCCCcCCCCCC-CceEEEEEEE--CEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEE
Q 022278 94 YLITPAMGSHFVMYLANMQENARSALPPH-DVERFIFVVQ--GSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSAT 170 (300)
Q Consensus 94 ~L~sp~~g~~f~~~lv~l~PG~~~~~~~h-~gEEf~yVLe--G~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~ 170 (300)
.+..+..+..+..+++++ |+....|.| ..+|++|||+ |++++++ +|+++.|++||++++|+|..|++.+ +++
T Consensus 37 R~l~~~~~fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i-dge~~~l~~GD~v~IPpg~~H~i~g--~l~ 111 (157)
T 4h7l_A 37 RAFGHDAGTSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL-NGQSYPLTKLLAISIPPLVRHRIVG--EAT 111 (157)
T ss_dssp EESCGGGCCSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE-TTEEEECCTTEEEEECTTCCEEEES--CEE
T ss_pred EEeEcCCCCcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE-CCEEEEeCCCCEEEECCCCeEeeEC--CEE
Confidence 333333343455555555 444566755 4689999999 9999999 9999999999999999999999985 799
Q ss_pred EEEEEe
Q 022278 171 LVVFER 176 (300)
Q Consensus 171 vl~v~~ 176 (300)
+|++..
T Consensus 112 ~L~I~~ 117 (157)
T 4h7l_A 112 IINIVS 117 (157)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999854
No 148
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.91 E-value=3e-09 Score=86.59 Aligned_cols=72 Identities=14% Similarity=0.138 Sum_probs=61.2
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe-CCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~-~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+.+.+.+.+||... . |.|..+|.+|||+|++.+++ ||+.+.+++||++++|+|.+|.+.|.++..-.|++|
T Consensus 48 ~~~~g~w~~~pG~~~-~-~~~~~~E~~~Vl~G~~~l~~~~g~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~~ 120 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-S-NTTGYIEYCHIIEGEARLVDPDGTVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFVT 120 (123)
T ss_dssp TEEEEEEEEEEEEEE-C-CCTTEEEEEEEEEEEEEEECTTCCEEEEETTCEEEECTTCCCEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-e-EcCCCcEEEEEEEEEEEEEECCCeEEEECCCCEEEECCCCeEEEEECCceeEEEEEE
Confidence 466678889999764 2 34444789999999999999 999999999999999999999999998877777765
No 149
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.81 E-value=1e-08 Score=101.38 Aligned_cols=89 Identities=11% Similarity=0.193 Sum_probs=73.1
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---C-CE---------------------
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---G-DS--------------------- 259 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~-g~--------------------- 259 (300)
+..+.+.+.. -+..+.+++++||+.++. |+|...+++||++|+|++.+ + .+
T Consensus 31 ~e~~~~~~~~L~~~gvs~~R~~i~pggl~lP-h~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~q 109 (496)
T 3ksc_A 31 IETWNPNNKQFRCAGVALSRATLQRNALRRP-YYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQ 109 (496)
T ss_dssp EEECCTTSHHHHHHTCEEEEEEECTTEEEEE-EEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCC
T ss_pred EEeccccchhhccCCceEEEEEecCCCEeCc-eEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchh
Confidence 4444444322 368899999999999886 56688899999999999887 3 23
Q ss_pred -EEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecCC
Q 022278 260 -WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 260 -~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr 297 (300)
.+.+++||++.+|+|.+||++|.|+++++.|+.=|+|-
T Consensus 110 k~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n 148 (496)
T 3ksc_A 110 KVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRS 148 (496)
T ss_dssp CEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTC
T ss_pred eeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCc
Confidence 45999999999999999999999999999999888763
No 150
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.77 E-value=3e-08 Score=86.71 Aligned_cols=94 Identities=14% Similarity=-0.032 Sum_probs=72.4
Q ss_pred eccCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEE
Q 022278 190 VGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVL 269 (300)
Q Consensus 190 ~~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i 269 (300)
.+++++++|.+. ++++..+.|...+ ...++++.++||+.+|. |+|..+|..|||+|.-. ++...+.+||++
T Consensus 99 ~~~~~~~~W~~~-~~Gv~~~~L~~~~---~~~v~l~~~~pG~~~p~-H~H~g~E~~~VL~G~f~----de~~~~~~Gd~~ 169 (195)
T 2q1z_B 99 GRRLEDVRWRTL-GGGVRQAILPTGG---EAIARLLWIPGGQAVPD-HGHRGLELTLVLQGAFR----DETDRFGAGDIE 169 (195)
T ss_dssp CSCTTCSCCEEC-SSSCEEEEECCSS---SSEEEEEEECTTCBCCC-CCCSSCEEEEEEESEEE----CSSSEEETTCEE
T ss_pred cCCccccCceec-CCCeEEEEEecCC---CcEEEEEEECCCCCCCC-cCCCCeEEEEEEEEEEE----CCcEEECCCeEE
Confidence 347788999776 3445555554333 24568999999999997 67888889999999833 444578899999
Q ss_pred EeCCCCceeEEecCCccEEEEEE
Q 022278 270 WMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 270 ~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
++++|..|+..+.+++.+.-+..
T Consensus 170 ~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 170 IADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp EECSSCCCCCEECSSSCEEEEEE
T ss_pred EeCcCCccCCEeCCCCCEEEEEE
Confidence 99999999999988887765543
No 151
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.76 E-value=1.7e-08 Score=86.22 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=72.9
Q ss_pred eeEeCCCCeeeccCCC-CCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEecc
Q 022278 71 HALITPESHVLSPLPE-WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMV 149 (300)
Q Consensus 71 ~av~~~e~~~~~~~p~-~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~ 149 (300)
+..+..++..+...+. ..+.....|.... +....+.++.++||+..+.|.|.++|++|||+|+.... ++..+.+++
T Consensus 10 ~v~v~~~~~~W~~~~~~~~GV~~~~L~~~~-~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~--~~~~~~~~a 86 (165)
T 3cjx_A 10 LLTVDTTAHPFLKALGGHEGTDIFPLFMDP-YNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT--EYPGQKQTA 86 (165)
T ss_dssp CEEEETTSSCCBCSGGGCTTEEEEEEEEET-TTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEEET--TCTTSCEET
T ss_pred eEEEccccCCcEECCCCCCCEEEEEeEeCC-CCCcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC--CCceEEECC
Confidence 3445555544443331 3345555553222 22345679999999999989999999999999999852 332578999
Q ss_pred CcEEEeCCCCceEEeeCC----eEEEEEEEe
Q 022278 150 DSYTYLPPNFAHSLRAEG----SATLVVFER 176 (300)
Q Consensus 150 Gds~yfpa~~~H~~~N~~----~a~vl~v~~ 176 (300)
||+++.|++..|...+.+ +|.++|+.+
T Consensus 87 Gd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 87 GCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp TEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred CeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 999999999999998733 787777755
No 152
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.76 E-value=8.1e-09 Score=86.08 Aligned_cols=83 Identities=16% Similarity=0.141 Sum_probs=64.7
Q ss_pred cceEEEEec-CCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE--EEeccCcEEEeCCCCceE-Ee
Q 022278 89 NTLGAYLIT-PAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS--SKLMVDSYTYLPPNFAHS-LR 164 (300)
Q Consensus 89 ~~~~~~L~s-p~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~--~~L~~Gds~yfpa~~~H~-~~ 164 (300)
+....+|.. +..|. .+.+++++||+..+.|.|.++|.+|||+|+.+... ++.. +.+++||+++.|++..|. ..
T Consensus 30 Gv~~~~L~~~~~~g~--~~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~~-g~~~~~~~~~~Gd~~~~p~g~~H~p~~ 106 (145)
T 2o1q_A 30 GIRWKLLHVSPEMGS--WTAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVRG-GKAAGGDTAIAPGYGYESANARHDKTE 106 (145)
T ss_dssp CCEEEEEEEETTTTE--EEEEEEECTTEEECCEEESSCEEEEEEEEEEEETT-CGGGTSEEEESSEEEEECTTCEESCCE
T ss_pred CcEEEEeeECCCccc--EEEEEEECCCCCCCccCCCCCEEEEEEEeEEEEcC-CCEecceEeCCCEEEEECcCCccCCeE
Confidence 455666644 33332 25678999999999998888888999999999775 6666 899999999999999999 55
Q ss_pred eCCeEEEEEE
Q 022278 165 AEGSATLVVF 174 (300)
Q Consensus 165 N~~~a~vl~v 174 (300)
+.+.+.++.+
T Consensus 107 ~~e~~~~l~~ 116 (145)
T 2o1q_A 107 FPVASEFYMS 116 (145)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCeEEEEE
Confidence 5666766655
No 153
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.73 E-value=6.6e-08 Score=79.70 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=60.2
Q ss_pred eCCCCCcc-eEEEEEEecCCcccCc----ceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC-c
Q 022278 212 LPQAVPFD-FNIHIMDFQPGDFLNV----KEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK-T 285 (300)
Q Consensus 212 ~p~~~~~~-~~~~~~tl~PG~~~p~----~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e 285 (300)
+|.+.-.+ ........+|+-...+ .|.|..-+.+||++|+|.+.+||+.+++++||+++++||++|.+.+.++ +
T Consensus 4 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~ 83 (164)
T 2arc_A 4 LPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAR 83 (164)
T ss_dssp STTCCCSSSCEEEEEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEETTEEEEECTTCEEEECTTCCEEEEECTTSS
T ss_pred cccchhhhhhhhcceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEECCEEEEecCCeEEEEcCCCCEEEEeCCCCC
Confidence 34444333 3346666677655321 2456666789999999999999999999999999999999999999874 6
Q ss_pred cEEEEE
Q 022278 286 RTRYLL 291 (300)
Q Consensus 286 ~~~fi~ 291 (300)
++++++
T Consensus 84 ~~~~~~ 89 (164)
T 2arc_A 84 EWYHQW 89 (164)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 666654
No 154
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.72 E-value=4.8e-08 Score=85.32 Aligned_cols=69 Identities=17% Similarity=0.417 Sum_probs=57.2
Q ss_pred EEEEEEecCCc----------ccCcceeeccceEEEEEEeeEEEEeCCE---EE--EccCCcEEEeCCCCceeEEecCCc
Q 022278 221 NIHIMDFQPGD----------FLNVKEVHYNQHGLLLLEGQGIYRLGDS---WY--PVQAGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 221 ~~~~~tl~PG~----------~~p~~~~H~~eh~~~iL~G~G~~~~~g~---~~--~v~~GD~i~~~~~~~H~~~n~G~e 285 (300)
...++++.|+. ..+ .|+|..+|.+||++|+|.+.++|+ |+ .+++||+|++|+|++|++.+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~-~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~ 153 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFE-EHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN 153 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHS-CEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC
T ss_pred ceeEEEECCCcCcchhhhhccCCc-ceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC
Confidence 45567777875 124 478888999999999999999974 65 899999999999999999998777
Q ss_pred cEEEE
Q 022278 286 RTRYL 290 (300)
Q Consensus 286 ~~~fi 290 (300)
.++-|
T Consensus 154 ~~~ai 158 (191)
T 1vr3_A 154 YVKAM 158 (191)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 77665
No 155
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.72 E-value=3.7e-08 Score=95.65 Aligned_cols=79 Identities=11% Similarity=0.105 Sum_probs=67.8
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe----CCEEEEccCCcEEEeCCCCceeEEecCC-ccEEEEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL----GDSWYPVQAGDVLWMAPFVPQWYAALGK-TRTRYLLY 292 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~----~g~~~~v~~GD~i~~~~~~~H~~~n~G~-e~~~fi~~ 292 (300)
..+.+.+++++||+.++.| |..-++.+||++|+|++.+ +-..+.|++||++++|+|..||++|+|+ +++.++++
T Consensus 42 ~~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l 120 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKI 120 (418)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEE
T ss_pred cceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEe
Confidence 3678889999999999874 4456678999999999987 5678999999999999999999999876 68999998
Q ss_pred eecCC
Q 022278 293 KDVNR 297 (300)
Q Consensus 293 kd~nr 297 (300)
.|...
T Consensus 121 ~~~s~ 125 (418)
T 3s7i_A 121 SMPVN 125 (418)
T ss_dssp EEESS
T ss_pred ecCcC
Confidence 77543
No 156
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.71 E-value=4.5e-08 Score=96.08 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=73.2
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--------------------------
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-------------------------- 258 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g-------------------------- 258 (300)
++.+.+.+.. -++.+.+++++||+.++. |+|.-.+.+||++|+|++.+=.
T Consensus 28 ~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lP-h~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~ 106 (466)
T 3kgl_A 28 IEVWDHHAPQLRCSGVSFVRYIIESKGLYLP-SFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQG 106 (466)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---------
T ss_pred EEEECCCChhhccCCeEEEEEEECCCCEeCC-eeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccc
Confidence 4445565422 378999999999999986 6778889999999999776210
Q ss_pred --------------------------------------EEEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecCC
Q 022278 259 --------------------------------------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 259 --------------------------------------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~nr 297 (300)
+.+.|++||++++|+|.+||++|.|+++|++|+.=|.+-
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 107 QGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp --------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred ccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 225899999999999999999999999999999998853
No 157
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.62 E-value=2.3e-08 Score=86.58 Aligned_cols=55 Identities=18% Similarity=0.479 Sum_probs=47.8
Q ss_pred ceeeccceEEEEEEeeEEEEe--CCEEEE--ccCCcEEEeCCCCceeEEecCCccEEEE
Q 022278 236 KEVHYNQHGLLLLEGQGIYRL--GDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 236 ~~~H~~eh~~~iL~G~G~~~~--~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
.|+|..+|.+||++|+|.+.+ ||+|+. +++||+|++|+|++|++.+..+..++-+
T Consensus 95 ~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~i 153 (179)
T 1zrr_A 95 EHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAI 153 (179)
T ss_dssp CBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEE
T ss_pred ceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEE
Confidence 378888999999999999988 899865 9999999999999999998766555544
No 158
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.59 E-value=7.6e-08 Score=90.12 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=67.2
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEE----EeCCEEEEccC-C---cEEEeCCCCceeEEecCCccEEEEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY----RLGDSWYPVQA-G---DVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~----~~~g~~~~v~~-G---D~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+...+.+||...+.|-|+.+.+.++|++|++.+ ..+|+|+.+.. | |.+|||+|..|+++|+|++++++++.
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 3456788999999998888888999999999999 78999999999 9 99999999999999999999999886
Q ss_pred ee
Q 022278 293 KD 294 (300)
Q Consensus 293 kd 294 (300)
=+
T Consensus 353 ~~ 354 (369)
T 3st7_A 353 VN 354 (369)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 159
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.53 E-value=2.8e-07 Score=91.45 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=72.9
Q ss_pred EEEeeCCCCC---cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC---------------------------
Q 022278 208 LRKLLPQAVP---FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG--------------------------- 257 (300)
Q Consensus 208 ~~~l~p~~~~---~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~--------------------------- 257 (300)
+..+.+.... -...+.+++|+|||-.+. |+|.-.+.+||++|+|++-+=
T Consensus 33 ~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lP-h~~~a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~~~ 111 (531)
T 3fz3_A 33 IETWNFNQGDFQCAGVAASRITIQRNGLHLP-SYSNAPQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQER 111 (531)
T ss_dssp EEECCTTSHHHHHHTEEEEEEEECTTEEEEE-EEESSCEEEEEEECEEEEEECCTTCCCCEECCCC--------------
T ss_pred EEEeCCCChhhccCcceEEEEEecCCCEeCC-ccCCCCeEEEEEECcEEEEEEcCCCccccccccccccccccccccccc
Confidence 3344554333 358899999999999986 788888999999999866421
Q ss_pred -----------------------------------------------------------CEEEEccCCcEEEeCCCCcee
Q 022278 258 -----------------------------------------------------------DSWYPVQAGDVLWMAPFVPQW 278 (300)
Q Consensus 258 -----------------------------------------------------------g~~~~v~~GD~i~~~~~~~H~ 278 (300)
-+.+.|++||+|.+|+|+.||
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG~~~w 191 (531)
T 3fz3_A 112 QQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAGVAYW 191 (531)
T ss_dssp -----------------------------------------------------CCSCEESCCEEEETTEEEEECTTCCEE
T ss_pred cccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCCCeEE
Confidence 135789999999999999999
Q ss_pred EEecCCccEEEEEEeecCC
Q 022278 279 YAALGKTRTRYLLYKDVNR 297 (300)
Q Consensus 279 ~~n~G~e~~~fi~~kd~nr 297 (300)
++|.|+++++.++.-|+|-
T Consensus 192 ~yN~G~~~l~iv~~~Dt~n 210 (531)
T 3fz3_A 192 SYNDGDQELVAVNLFHVSS 210 (531)
T ss_dssp EECCSSSCEEEEEEEETTC
T ss_pred EEeCCCceEEEEEEEcccc
Confidence 9999999999999999864
No 160
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.52 E-value=2.5e-07 Score=79.25 Aligned_cols=70 Identities=24% Similarity=0.359 Sum_probs=58.0
Q ss_pred EcCCCcCCCCCCCceEEEEEEECEEEEEEcC-C--cEEEeccCcEEEeCCCCceEEeeCC-eEEEEEEEeeccc
Q 022278 111 MQENARSALPPHDVERFIFVVQGSAMLTNAS-G--VSSKLMVDSYTYLPPNFAHSLRAEG-SATLVVFERRYAS 180 (300)
Q Consensus 111 l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g-g--~~~~L~~Gds~yfpa~~~H~~~N~~-~a~vl~v~~~y~~ 180 (300)
-.|+++...|.|+.||++|||+|++.+.+.+ | +...|++||.+.+|+|++|+-...+ .+..++++++-.+
T Consensus 42 ~Gpn~r~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lviE~~r~~ 115 (174)
T 1yfu_A 42 GGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQRPA 115 (174)
T ss_dssp CSCBCCCCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEEEECCCT
T ss_pred cCCCcCccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEEEeCCCC
Confidence 3566677888899999999999999999833 2 4899999999999999999986554 7888888766544
No 161
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.51 E-value=3e-07 Score=77.93 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=69.8
Q ss_pred EeCCCCeeeccCC-CCCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCc
Q 022278 73 LITPESHVLSPLP-EWTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDS 151 (300)
Q Consensus 73 v~~~e~~~~~~~p-~~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gd 151 (300)
++..++..+...+ ...+.....|.....+ .....+++++||+..+.|.|.+.|.+|||+|+..+.- .+ ..+++||
T Consensus 11 ~v~~~~~~W~~~~~~~~Gv~~~~L~~d~~~-g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~e-~~--~~~~~Gd 86 (159)
T 3ebr_A 11 CLDGNDTPWMPFAPYSNDVMVKYFKIDPVR-GETITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYKE-HD--WVAHAGS 86 (159)
T ss_dssp CCCGGGSCCEECTTTCSSSEEEEEEEETTT-TEEEEEEEECSSCBCCCEEESSCEEEEEEESCEEETT-SS--CCBCTTC
T ss_pred EEcCCcCCcEeCCCCCCCEEEEEeeEcCCC-CeEEEEEEECCCCCcccccCCCCEEEEEEEeEEEEeC-CC--eEECCCe
Confidence 3444444443322 2344566666432222 3556789999999999999989999999999988542 32 4799999
Q ss_pred EEEeCCCCceEEeeC----CeEEEEEE
Q 022278 152 YTYLPPNFAHSLRAE----GSATLVVF 174 (300)
Q Consensus 152 s~yfpa~~~H~~~N~----~~a~vl~v 174 (300)
+++.|+|..|+..+. +.+.++++
T Consensus 87 ~~~~P~g~~H~~~~~~~~~e~~~~~~~ 113 (159)
T 3ebr_A 87 VVYETASTRHTPQSAYAEGPDIITFNI 113 (159)
T ss_dssp EEEECSSEEECEEESSSSSSCEEEEEE
T ss_pred EEEECCCCcceeEeCCCCCCCEEEEEE
Confidence 999999999999875 67877775
No 162
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=98.42 E-value=1.7e-05 Score=71.51 Aligned_cols=167 Identities=12% Similarity=0.105 Sum_probs=112.7
Q ss_pred EEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCC--CceEEee---CCeEEE--EEEEeecc
Q 022278 108 LANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA---EGSATL--VVFERRYA 179 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~--~~H~~~N---~~~a~v--l~v~~~y~ 179 (300)
..++.||...+.|+|. -|.+-||++|+++=.-.-|...++++||.-+..|| +-|+=.| +++.++ |||. +-
T Consensus 45 ~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~-P~- 122 (242)
T 1tq5_A 45 DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM-PE- 122 (242)
T ss_dssp EEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC-CS-
T ss_pred cceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeCCCCcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc-ch-
Confidence 5677898777778765 47799999999998863378899999999999776 6788777 245554 4773 32
Q ss_pred ccCCCCcceeeccCCCCCCcccCCceeEEEEee-CCC------CCcceEEEEEEecCCcccCcceeeccceEEEEEEeeE
Q 022278 180 SLENHITEQIVGSTDKQPLLETPGEVFQLRKLL-PQA------VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQG 252 (300)
Q Consensus 180 ~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~-p~~------~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G 252 (300)
.++.+|..---. +|... + + +.+. +.. ...+..+-..+|+||+.+-+.-...+.--+|+++|+.
T Consensus 123 -~k~~~P~y~~~~---~p~~~-~-g----~~iag~~g~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v 192 (242)
T 1tq5_A 123 -ENGITPRYEQRR---FDAVQ-G-K----QLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNV 192 (242)
T ss_dssp -SCSCCCEEEEEC---CCCCS-S-E----EEEEESSCGGGCEECSSSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEE
T ss_pred -hcCCCCcceeec---CCchh-C-C----EEEEecCCCCCcEeccCCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcE
Confidence 244555544332 44322 2 2 3322 211 1235667778999999874422222334578999977
Q ss_pred EEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 253 IYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 253 ~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+ ||+ .+++||.+.+.++..=.+.+ .++.++|++
T Consensus 193 ~v--~g~--~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 193 TI--NGV--KASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp EE--TTE--EEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred EE--CCE--EeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 55 774 79999999999877667776 467888775
No 163
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.41 E-value=9.4e-07 Score=77.14 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=57.5
Q ss_pred EEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee--CCeEEEEEEE
Q 022278 104 FVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA--EGSATLVVFE 175 (300)
Q Consensus 104 f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N--~~~a~vl~v~ 175 (300)
..+.++.++||+..+.|.|+++|..|||+|+.+ ++...+.+||++++|++..|...+ ++.+.++.+.
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~-----de~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~ 193 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRGLELTLVLQGAFR-----DETDRFGAGDIEIADQELEHTPVAERGLDCICLAAT 193 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSSCEEEEEEESEEE-----CSSSEEETTCEEEECSSCCCCCEECSSSCEEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE-----CCcEEECCCeEEEeCcCCccCCEeCCCCCEEEEEEe
Confidence 344799999999999999999999999999855 244589999999999999999998 6788877764
No 164
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=98.39 E-value=2.2e-05 Score=72.03 Aligned_cols=162 Identities=8% Similarity=0.091 Sum_probs=109.0
Q ss_pred CCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCc-eEEee---CCeEEEEEEEeeccccCCCCcceeeccCCCC
Q 022278 121 PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLRA---EGSATLVVFERRYASLENHITEQIVGSTDKQ 196 (300)
Q Consensus 121 ~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~-H~~~N---~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~ 196 (300)
....|-.+..|.|..++++ +|+++.|..-|++|+|.|.. -.+.. ..++++.+.+.+. .+.-|..++. .+|+
T Consensus 76 l~~rE~~iV~l~G~~~V~v-dG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAPa---~~~~P~r~I~-~~dv 150 (282)
T 1xru_A 76 LERRELGVINIGGAGTITV-DGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPA---HTTYPTKKVT-PDEV 150 (282)
T ss_dssp TTTEEEEEEECSSCEEEEE-TTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEEC---SSCCCCEEEC-HHHH
T ss_pred cCCcEEEEEEccCeEEEEE-CCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEcccc---CCCCCCEEEC-HHHC
Confidence 4566777888999999999 99999999999999999997 55664 3479998885554 4433555554 3444
Q ss_pred CCcccCC----ceeEEEEeeCCC-CC-cceEEEEEEecCCc---ccCcceeec--cceEEEE-EE--eeE--EEEeCCEE
Q 022278 197 PLLETPG----EVFQLRKLLPQA-VP-FDFNIHIMDFQPGD---FLNVKEVHY--NQHGLLL-LE--GQG--IYRLGDSW 260 (300)
Q Consensus 197 ~~~~~~g----~~~~~~~l~p~~-~~-~~~~~~~~tl~PG~---~~p~~~~H~--~eh~~~i-L~--G~G--~~~~~g~~ 260 (300)
....... ...++..+++++ .. -+..|-...+.||+ +.|. |+|. +|+.||. +. |.+ ++.-.++.
T Consensus 151 ~~~~rG~~~~sn~R~I~~il~~~~~~~~qllmg~evltpgg~WSSyPp-HkHDrr~EeyyYF~l~~~gfv~q~~g~p~Et 229 (282)
T 1xru_A 151 SPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPC-HTHERRMEVYFYFNMDDDACVFHMMGQPQET 229 (282)
T ss_dssp CCEEECCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCEESCSE-EECTTEEEEEEEESCCTTCCEEEEEEETTEE
T ss_pred CeeeccCCCCCCcEEEEEeeCCCCCchhhEEEEEEEEeCCCCcCCCCC-ccCCCCceEEEEEEeCCCCEEEEEeCCCCCe
Confidence 4444422 234666677543 33 45667778888997 3564 6774 4556665 22 222 23333444
Q ss_pred --EEccCCcEEEeCCCCceeEEecCCccEEEE
Q 022278 261 --YPVQAGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 261 --~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
..|+-||++.+|++-+|+ ..|-+...||
T Consensus 230 rhi~V~n~daVlvP~wh~h~--~~G~~~Y~yl 259 (282)
T 1xru_A 230 RHIVMHNEQAVISPSWSIHS--GVGTKAYTFI 259 (282)
T ss_dssp EEEEECSSEEEEECTTCEEE--EEESSCCEEE
T ss_pred eEEEEECCCEEEeCCCCCCC--CCCccceEEE
Confidence 467999999999877777 4477776666
No 165
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.38 E-value=1.2e-06 Score=78.24 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=67.3
Q ss_pred cCCCCCCcccCCceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEe
Q 022278 192 STDKQPLLETPGEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM 271 (300)
Q Consensus 192 ~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~ 271 (300)
+.++.+|.+.+.+++..+.|.-.+....+.++++.++||+.+|. |+|...+..|||+|.-. +++. ...+||+++.
T Consensus 15 ~~~~~~W~~~~~~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~-H~H~g~Ee~~VL~G~f~--d~~~--~~~~Gd~~~~ 89 (223)
T 3o14_A 15 DTDQLEWRPSPMKGVERRMLDRIGGEVARATSIVRYAPGSRFSA-HTHDGGEEFIVLDGVFQ--DEHG--DYPAGTYVRN 89 (223)
T ss_dssp EGGGSCCEECSSTTEEEEEEEEESSSSCEEEEEEEECTTEECCC-EECTTCEEEEEEEEEEE--ETTE--EEETTEEEEE
T ss_pred eCccCCceeCCCCCEEEEEeecCCCccccEEEEEEECCCCCccc-ccCCCCEEEEEEEeEEE--ECCe--EECCCeEEEe
Confidence 67888898875445566666432212235677899999999997 78877788999999854 5554 6679999999
Q ss_pred CCCCceeEEecCCccEE
Q 022278 272 APFVPQWYAALGKTRTR 288 (300)
Q Consensus 272 ~~~~~H~~~n~G~e~~~ 288 (300)
|+|..|+..+ ++.+.
T Consensus 90 P~g~~H~p~a--~~gc~ 104 (223)
T 3o14_A 90 PPTTSHVPGS--AEGCT 104 (223)
T ss_dssp CTTCEECCEE--SSCEE
T ss_pred CCCCccccEe--CCCCE
Confidence 9999999887 44444
No 166
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.37 E-value=1.1e-06 Score=75.61 Aligned_cols=78 Identities=12% Similarity=0.154 Sum_probs=64.8
Q ss_pred eEEEEEEecCCcccCcceeec------cceEEEEEEeeEEEEeCCEE---------------------EEccCCcEEEeC
Q 022278 220 FNIHIMDFQPGDFLNVKEVHY------NQHGLLLLEGQGIYRLGDSW---------------------YPVQAGDVLWMA 272 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~------~eh~~~iL~G~G~~~~~g~~---------------------~~v~~GD~i~~~ 272 (300)
+...++.+.||..+|.|.|.. .+|.+++++|+..++++|++ ..++|||.+.++
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 778899999999999855555 66778899999999999866 499999999999
Q ss_pred CCCceeEEecCCccEEEEEEeecCCC
Q 022278 273 PFVPQWYAALGKTRTRYLLYKDVNRN 298 (300)
Q Consensus 273 ~~~~H~~~n~G~e~~~fi~~kd~nr~ 298 (300)
||.+|+|.| |.+.+...-+--+|.|
T Consensus 133 pg~~H~f~a-geegvli~EvSt~~dD 157 (175)
T 2y0o_A 133 PNTKHWFQA-GEEGAVVTEMSSTSTD 157 (175)
T ss_dssp TTCCEEEEE-EEEEEEEEEEEECCCG
T ss_pred CCCcEEEEe-CCCCEEEEEEeCCCCC
Confidence 999999999 5555766666666654
No 167
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.37 E-value=1.1e-06 Score=75.20 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=55.4
Q ss_pred cCCCcCCCCCCCceEEEEEEECEEEEEEcC-C------cEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeecc
Q 022278 112 QENARSALPPHDVERFIFVVQGSAMLTNAS-G------VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYA 179 (300)
Q Consensus 112 ~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g-g------~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~ 179 (300)
.|+.+...|.++.||++||++|++.|.+.+ | +...|++||.+.+|++++|+-...+.+..++++++=.
T Consensus 42 GPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~v~lviErkR~ 116 (176)
T 1zvf_A 42 GPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADTVGIVVEQDRP 116 (176)
T ss_dssp SSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEECCC
T ss_pred CCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCcEEEEEEecCC
Confidence 455667778889999999999999999833 4 4799999999999999999975556677777766544
No 168
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=98.36 E-value=4e-05 Score=70.48 Aligned_cols=175 Identities=8% Similarity=0.128 Sum_probs=109.1
Q ss_pred EEEEcCCCcCCCC--CCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCc-eEEee---CCeEEEEEEEeecccc
Q 022278 108 LANMQENARSALP--PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLRA---EGSATLVVFERRYASL 181 (300)
Q Consensus 108 lv~l~PG~~~~~~--~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~-H~~~N---~~~a~vl~v~~~y~~~ 181 (300)
.++|++|...... ....|-.+..|.|..++++ +|+++.|..-|++|+|.|.. -.+.+ ..+|++.+.+.+ +
T Consensus 61 ~l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v-dg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav~sAP---a 136 (289)
T 1ywk_A 61 ELEIILDKELGVDYFLERRELGVINIGGPGFIEI-DGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYISCVP---A 136 (289)
T ss_dssp CEECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE-TTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEE---C
T ss_pred eEEcCCCceecccccCCCcEEEEEEccCeEEEEE-CCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccc---c
Confidence 3456666444433 4566777888999999999 99999999999999999977 56665 457999888555 4
Q ss_pred CCCCcceeeccCCCCCCcccCC----ceeEEEEeeC-CCCC-cceEEEEEEecCCc---ccCcceeec--cceEEEE-EE
Q 022278 182 ENHITEQIVGSTDKQPLLETPG----EVFQLRKLLP-QAVP-FDFNIHIMDFQPGD---FLNVKEVHY--NQHGLLL-LE 249 (300)
Q Consensus 182 ~g~~p~~~~~~~~d~~~~~~~g----~~~~~~~l~p-~~~~-~~~~~~~~tl~PG~---~~p~~~~H~--~eh~~~i-L~ 249 (300)
.+.-|..++. .+|++...... ...++..+++ +... -+..|-...+.||+ +.|. |+|. +|..||. +.
T Consensus 137 ~~~~P~r~I~-~~dv~~~~rG~~~~sN~R~I~~il~~~~~~s~qllmg~evltpGg~WSSyPp-HkHDrr~E~yyYF~l~ 214 (289)
T 1ywk_A 137 HHKYPNVKIS-IDEITPMETGDPLTLNQRKIYQYIHPNVCESCQLQMGYTILEPGSAWNTMPC-HTHERRMEAYVYFDME 214 (289)
T ss_dssp SSCCCCEEEC-TTTCCCCCBCCGGGTCCEEEEEEESTTTCCCSSCEEEEEEECTTCCCCC---------CEEEEEEESCC
T ss_pred CCCCCCEEEC-HHHCCeeeccCCCCCCcEEEEEeeCCCCCchheEEEEEEEEeCCCCcCCCCC-ccCCCCCeeEEEEEeC
Confidence 4434555555 55665555432 2346666775 4333 45667777888997 3554 6775 3333443 23
Q ss_pred ee-EEEEeCC---EE--EEccCCcEEEeCCCCceeEEecCCccEEEE
Q 022278 250 GQ-GIYRLGD---SW--YPVQAGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 250 G~-G~~~~~g---~~--~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
.+ ..+.+.| +. ..|+-||++.+|++--|. ..|.....||
T Consensus 215 p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~Y~yl 259 (289)
T 1ywk_A 215 EDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSNYSFI 259 (289)
T ss_dssp TTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSCCEEE
T ss_pred CCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcCeEEE
Confidence 22 2444433 33 678999999999976664 3444444444
No 169
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.35 E-value=7.6e-07 Score=75.08 Aligned_cols=86 Identities=12% Similarity=0.029 Sum_probs=66.5
Q ss_pred cCCCCCCcccC----CceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--EEEEccC
Q 022278 192 STDKQPLLETP----GEVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--SWYPVQA 265 (300)
Q Consensus 192 ~~~d~~~~~~~----g~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g--~~~~v~~ 265 (300)
+.++++|.+.+ ..++.++.|--. ......+.++.++||+.+|. |.|...+.+|||+|.-.+.-++ .....++
T Consensus 15 ~~d~~~W~p~P~~l~~~Gv~~k~L~~~-~e~g~~t~lvr~~pG~~~p~-H~H~g~ee~~VL~G~~~~~~Gd~~~~~~~~a 92 (153)
T 3bal_A 15 KISDNNYVPFPEAFSDGGITWQLLHSS-PETSSWTAIFNCPAGSSFAS-HIHAGPGEYFLTKGKMEVRGGEQEGGSTAYA 92 (153)
T ss_dssp ECCGGGCEECCGGGEESCCEEEEEEEE-TTTTEEEEEEEECTTEEECC-EEESSCEEEEEEESEEEETTCGGGTSEEEES
T ss_pred ccccCceecCCCccCCCCeEEEEEEEC-CccceEEEEEEeCCCCCccC-ccCCCCEEEEEEEEEEEecCccccCccccCC
Confidence 46789999886 456677776311 12346677889999999997 7888888899999999875543 2356789
Q ss_pred CcEEEeCCCCceeE
Q 022278 266 GDVLWMAPFVPQWY 279 (300)
Q Consensus 266 GD~i~~~~~~~H~~ 279 (300)
|++++.|+|..|..
T Consensus 93 GsYv~ePpGs~H~p 106 (153)
T 3bal_A 93 PSYGFESSGALHGK 106 (153)
T ss_dssp SEEEEECTTCEESC
T ss_pred CeEEEcCCCCcccc
Confidence 99999999999974
No 170
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.35 E-value=1.5e-06 Score=75.80 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=53.4
Q ss_pred CCCCCCceEEEEEEECEEEEEEcCCc-----EEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccCCCCcc
Q 022278 118 ALPPHDVERFIFVVQGSAMLTNASGV-----SSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENHITE 187 (300)
Q Consensus 118 ~~~~h~gEEf~yVLeG~v~l~v~gg~-----~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~g~~p~ 187 (300)
..|.|+.+|++||++|++.+.+ +++ +..+++||.+++|+|++|++.+.+.- .+...+-|.+.+|+.|.
T Consensus 98 ~~H~H~~~Ei~yVleG~G~f~i-~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~-~~~airlF~~~~~W~~~ 170 (191)
T 1vr3_A 98 EEHLHLDEEIRYILEGSGYFDV-RDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKN-YVKAMRLFVGEPVWTPY 170 (191)
T ss_dssp SCEECSSCEEEEEEEEEEEEEE-ECTTSCEEEEEEETTEEEEECTTCCEEEEECTTC-CEEEEEEESSSCCCCCE
T ss_pred cceECCcceEEEEEeceEEEEE-CCCCCeEEEEEECCCCEEEECcCCcCCcccCCCC-CEEEEEEECCCCCccCC
Confidence 5567888999999999999999 543 45999999999999999999974332 23344567777887654
No 171
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=98.31 E-value=9.1e-05 Score=68.02 Aligned_cols=196 Identities=16% Similarity=0.196 Sum_probs=126.9
Q ss_pred ceEEEEecCCCC---CcEEEEEEEEcCCCcCCCCCCC-ceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCC--ceEE
Q 022278 90 TLGAYLITPAMG---SHFVMYLANMQENARSALPPHD-VERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF--AHSL 163 (300)
Q Consensus 90 ~~~~~L~sp~~g---~~f~~~lv~l~PG~~~~~~~h~-gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~--~H~~ 163 (300)
..++.+.+...- ..|.++--.+.|+...+.|+|. -|.+=||++|+++=.-.-|..-++++||.=+.-||. -|+=
T Consensus 22 ~~v~R~~~~~~~~~~gpf~~ld~~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~~~i~~GdvQwMtAG~GI~HsE 101 (277)
T 2p17_A 22 HRSGSVLEPGNWQEYDPFLLLMEDIFERGTFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAGRGVVHKE 101 (277)
T ss_dssp EEEEEEECSSCHHHHTTEEEEEEEEECTTCCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECTTCEEEEE
T ss_pred eEEeecCCcccccccCCEEEEecCCCCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCceEECCCeEEEEeCCCCEEEEe
Confidence 344455543321 2344442266777777778665 577899999999987534778899999999999885 5766
Q ss_pred ee--CCeEEEE--EEEeeccccCCCCcceeeccCCCCCCcccCCceeEEEEeeCC--------CCCcceEEEEEEecCCc
Q 022278 164 RA--EGSATLV--VFERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQ--------AVPFDFNIHIMDFQPGD 231 (300)
Q Consensus 164 ~N--~~~a~vl--~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~p~--------~~~~~~~~~~~tl~PG~ 231 (300)
.| +++.+.+ |+.-+- ..++.+|..---..+++|....+| ..+|.+... ....+..+.-++|+||+
T Consensus 102 ~~~~~~~~~~lQlWvnLP~-~~k~~~P~y~~~~~~~ip~~~~~g--~~~rviaG~~~g~~~p~~~~~~~~~~~~~L~~g~ 178 (277)
T 2p17_A 102 DPASGSTVHSLQLWVNLPS-AYKMTEPRYQNLRSKDMPVRKEEG--ATIRVFSGSSKGVKAPTKNIVPVTMVEMIVEPGT 178 (277)
T ss_dssp EECTTCCEEEEEEEEECCG-GGTTCCCEEEEECGGGSCEEEETT--EEEEEEESEETTEECCCCCSSCEEEEEEEECTTC
T ss_pred ecCCCCCEEEEEEEeeCCh-hhcCCCCcceeeccccCCeeeeCC--eEEEEEEcCccCCCCceecCCCCEEEEEEECCCC
Confidence 67 3455543 553111 124556776666667788655544 245555421 11236777788999999
Q ss_pred ccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCC-C----CceeEEecCCccEEEEEE
Q 022278 232 FLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAP-F----VPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 232 ~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~-~----~~H~~~n~G~e~~~fi~~ 292 (300)
.+.+.-...++..+|+++|+.. +||+...+.+||.+++.+ + ..=.+.+. ++.++|++
T Consensus 179 ~~~~~~~~~~~~~lyv~~G~v~--v~g~~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a~~Ll~ 240 (277)
T 2p17_A 179 TVVQDLPGHYNGFLYILEGSGV--FGADNIEGKAGQALFFSRHNRGEETELNVTAR--EKLRLLLY 240 (277)
T ss_dssp EEEEEEETTCEEEEEEEESEEE--ETTTTEEEETTEEEEECCCCTTCEEEEEEEES--SSEEEEEE
T ss_pred EEEeccCCCCEEEEEEEeCeEE--ECCCceEeCCCcEEEEcCCCCCccceEEEEeC--CCcEEEEE
Confidence 9765323345567899999865 466334699999999986 6 44456664 46777765
No 172
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=98.31 E-value=7e-06 Score=66.07 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=56.7
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEE
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFE 175 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~ 175 (300)
.+..-+-+..||.-.- ..+..+||+|||+|+++++..||+...+++||+++||+|..-.|+-.+++|=+++.
T Consensus 41 ~~~~GvWe~tPG~~~~-~~~~~~E~~~iLeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~ 112 (116)
T 3es4_A 41 GTIVAVWMAEPGIYNY-AGRDLEETFVVVEGEALYSQADADPVKIGPGSIVSIAKGVPSRLEILSSFRKLATV 112 (116)
T ss_dssp CCEEEEEEECSEEEEE-CCCSEEEEEEEEECCEEEEETTCCCEEECTTEEEEECTTCCEEEEECSCEEEEEEE
T ss_pred CEEEEEEecCCceeEC-eeCCCcEEEEEEEeEEEEEeCCCeEEEECCCCEEEECCCCeEEEEEeEEEeEEEEE
Confidence 4445566888885432 23455699999999999998668889999999999999999999987777655553
No 173
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.31 E-value=2.4e-06 Score=70.18 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=54.6
Q ss_pred EEEEcCCCcC-----CCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-C--CeEEEEEEE
Q 022278 108 LANMQENARS-----ALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-E--GSATLVVFE 175 (300)
Q Consensus 108 lv~l~PG~~~-----~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~--~~a~vl~v~ 175 (300)
.-...|+... .++.|+.-+++||++|++++.+ +++++.+++||.+++||+..|.+.+ . ++.+.+|+.
T Consensus 17 ~~~~~~~~~~~~~~~~p~~h~~~~i~~v~~G~~~~~i-~~~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 17 LTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKN-QGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp EEEEETTSTTCSCEEETTCCSSEEEEEEEEECEEEEE-TTEEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred ceeeccCCchhhhhccccCCCceEEEEEEEeEEEEEE-CCEEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 3344565443 2346888899999999999999 9999999999999999999999997 3 567877773
No 174
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.26 E-value=1.3e-06 Score=73.69 Aligned_cols=103 Identities=13% Similarity=0.070 Sum_probs=75.3
Q ss_pred eeeEeCCCCeeeccCCC---CCcceEEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cE
Q 022278 70 DHALITPESHVLSPLPE---WTNTLGAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VS 144 (300)
Q Consensus 70 ~~av~~~e~~~~~~~p~---~~~~~~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg--~~ 144 (300)
..+++.+++..+...|. ..+.....|--.. .+.-...++.++||+..+.|.|.+.|.+|||+|+....- ++ ..
T Consensus 10 ~~~~v~~d~~~W~p~P~~l~~~Gv~~k~L~~~~-e~g~~t~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~~-Gd~~~~ 87 (153)
T 3bal_A 10 AEEYVKISDNNYVPFPEAFSDGGITWQLLHSSP-ETSSWTAIFNCPAGSSFASHIHAGPGEYFLTKGKMEVRG-GEQEGG 87 (153)
T ss_dssp CCEEEECCGGGCEECCGGGEESCCEEEEEEEET-TTTEEEEEEEECTTEEECCEEESSCEEEEEEESEEEETT-CGGGTS
T ss_pred cceEEccccCceecCCCccCCCCeEEEEEEECC-ccceEEEEEEeCCCCCccCccCCCCEEEEEEEEEEEecC-ccccCc
Confidence 34677888877776651 1345566653322 244556788999999999999999999999999998653 44 34
Q ss_pred EEeccCcEEEeCCCCceEEe-eCCeEEEEEE
Q 022278 145 SKLMVDSYTYLPPNFAHSLR-AEGSATLVVF 174 (300)
Q Consensus 145 ~~L~~Gds~yfpa~~~H~~~-N~~~a~vl~v 174 (300)
..+++|+|+|-|+|..|... .++++.++++
T Consensus 88 ~~~~aGsYv~ePpGs~H~p~~~~~~~~~~~~ 118 (153)
T 3bal_A 88 STAYAPSYGFESSGALHGKTFFPVESQFYMT 118 (153)
T ss_dssp EEEESSEEEEECTTCEESCCEESSCEEEEEE
T ss_pred cccCCCeEEEcCCCCcccceeCCCCeEEEEE
Confidence 78999999999999999844 4555666555
No 175
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=98.26 E-value=0.00013 Score=66.22 Aligned_cols=169 Identities=12% Similarity=0.055 Sum_probs=111.7
Q ss_pred EEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCC--CceEEee---CCeEEE--EEEEeecc
Q 022278 108 LANMQENARSALPPHDV-ERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPN--FAHSLRA---EGSATL--VVFERRYA 179 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~--~~H~~~N---~~~a~v--l~v~~~y~ 179 (300)
..++.||...+.|+|.+ |.+-||++|+++-.-.-|...++++||.-+..|| +.|+=.| +++.++ |||.- .
T Consensus 68 ~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~l--~ 145 (256)
T 2vec_A 68 QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDA--C 145 (256)
T ss_dssp EEEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEEC--C
T ss_pred ccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeCCCCEEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEeC--C
Confidence 56788988778887766 5588999999998863388899999999999776 6899887 245665 47751 1
Q ss_pred ccCCCCcceeeccCCCCCCcccCCceeEEEEee-CCC------CCcceEEEEEEecCCcccCcceeeccceEEEEEEeeE
Q 022278 180 SLENHITEQIVGSTDKQPLLETPGEVFQLRKLL-PQA------VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQG 252 (300)
Q Consensus 180 ~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~-p~~------~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G 252 (300)
| ....|..--- ++|. + . .+.+. +.. ...+..+.-.+|+||+.+.+.-...+ -.+|+++|+.
T Consensus 146 p-~~~~P~yq~~---~~p~----~-~--~~lIag~~G~~~p~~~~~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v 213 (256)
T 2vec_A 146 P-QRENPLIQKL---ALNM----G-K--QQLIASPEGAMGSLQLRQQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKF 213 (256)
T ss_dssp T-TSCCCSEEEE---ECCC----S-S--EEEEEESSCGGGCEECSSSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCE
T ss_pred h-hcCCCCceEE---cCCC----C-C--EEEEEeCCCCCCceEccCCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEE
Confidence 2 1112322211 1231 2 2 23332 211 12356677789999998754221223 5689999988
Q ss_pred EEEeC-CEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 253 IYRLG-DSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 253 ~~~~~-g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
.+.-+ ++...+.+||.+.+.++..=.+.+ .++.++|++
T Consensus 214 ~v~g~~~~~~~l~~gd~~~l~~~~~l~l~a--~~~a~~LL~ 252 (256)
T 2vec_A 214 HALTHHEEKAALTCGDGAFIRDEANITLVA--DSPLRALLI 252 (256)
T ss_dssp EEEETTEEEEEECTTCEEEEESCSEEEEEE--SSSEEEEEE
T ss_pred EECCccccceEECCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 77532 245679999999998776656666 478888876
No 176
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=98.23 E-value=4.9e-05 Score=70.26 Aligned_cols=186 Identities=11% Similarity=0.057 Sum_probs=122.7
Q ss_pred EEEE-EEEEcCCCcCCCCCCC-ceEEEEEE-ECEEEEEEcCCcEEEeccCcEEEeCCCC--ceEEee--CCeEEEE--EE
Q 022278 104 FVMY-LANMQENARSALPPHD-VERFIFVV-QGSAMLTNASGVSSKLMVDSYTYLPPNF--AHSLRA--EGSATLV--VF 174 (300)
Q Consensus 104 f~~~-lv~l~PG~~~~~~~h~-gEEf~yVL-eG~v~l~v~gg~~~~L~~Gds~yfpa~~--~H~~~N--~~~a~vl--~v 174 (300)
|.++ ...+.|+...+.|+|. -|.+=||+ +|+++=.-.-|..-++++||.=+.-||. -|+=.| +++.+.+ |+
T Consensus 39 f~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWv 118 (290)
T 1j1l_A 39 FLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWV 118 (290)
T ss_dssp EEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCEEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEe
Confidence 4443 4467787767777665 47788999 9999987534778899999999998885 476666 3455543 55
Q ss_pred EeeccccCCCCcceeeccCCCCCCcccCCceeEEEEeeCC--------CCCcceEEEEEEecCCcccCcceeeccceEEE
Q 022278 175 ERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQ--------AVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLL 246 (300)
Q Consensus 175 ~~~y~~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~p~--------~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~ 246 (300)
.=+= ..++.+|..---.-+++|....+| +.++.+..+ ....+..+--++|+||+.+-+.-...++..+|
T Consensus 119 nLP~-~~k~~~P~y~~~~~~~ip~~~~~g--~~v~viaG~~~g~~~p~~~~~~~~~~~~~l~~g~~~~~~l~~~~~~~ly 195 (290)
T 1j1l_A 119 NLRS-SEKMVEPQYQELKSEEIPKPSKDG--VTVAVISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQPIPKGWTSFIY 195 (290)
T ss_dssp ECCG-GGTTSCCEEEEECGGGSCCCEETT--EEEEEEESEETTEECCCCCSSCEEEEEEEECTTCEEEEECCTTCEEEEE
T ss_pred cCCh-hhcCCCCcceecccccCCcEeECC--EEEEEEcCCcccCCCceeccCCcEEEEEEECCCCEEEeecCCCCEEEEE
Confidence 2111 124455665555555677655443 355555432 11235667778999999874322223566789
Q ss_pred EEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 247 LLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 247 iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+++|+..+.-+....++.++..++..+|..=.+.|.++++.++|++
T Consensus 196 v~~G~v~v~g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 196 TISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp EEESCEEESCTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred EEeCeEEECCcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 9999987632222256778999999888777777766788888876
No 177
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.17 E-value=5.2e-06 Score=71.40 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=54.4
Q ss_pred cEEEEEEEEcCCCcCCCCCCC-------ceEEEEEEECEEEEEEcCCcE---------------------EEeccCcEEE
Q 022278 103 HFVMYLANMQENARSALPPHD-------VERFIFVVQGSAMLTNASGVS---------------------SKLMVDSYTY 154 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~-------gEEf~yVLeG~v~l~v~gg~~---------------------~~L~~Gds~y 154 (300)
++.--++.+.||+..+.|.|. -+|-++|+.|++++++ +|+. ..|++||++.
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~-~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYV-EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEE-SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEE-CCccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 477788899999988777444 4555559999999999 7755 4999999999
Q ss_pred eCCCCceEEee-CCeEE
Q 022278 155 LPPNFAHSLRA-EGSAT 170 (300)
Q Consensus 155 fpa~~~H~~~N-~~~a~ 170 (300)
+|+++.|++.| .+.+.
T Consensus 131 Ippg~~H~f~ageegvl 147 (175)
T 2y0o_A 131 IPPNTKHWFQAGEEGAV 147 (175)
T ss_dssp ECTTCCEEEEEEEEEEE
T ss_pred ECCCCcEEEEeCCCCEE
Confidence 99999999998 44433
No 178
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.14 E-value=1.8e-05 Score=67.80 Aligned_cols=76 Identities=11% Similarity=0.144 Sum_probs=61.4
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEE---cCC-----cEEEeccCcEEEeCCCCceEEee--CCeEE
Q 022278 102 SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTN---ASG-----VSSKLMVDSYTYLPPNFAHSLRA--EGSAT 170 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v---~gg-----~~~~L~~Gds~yfpa~~~H~~~N--~~~a~ 170 (300)
.+|+.+++...||+.++.|.|++ ..+++||+|+++.++ .++ ++..+.+||.+++|++..|+++| +++|.
T Consensus 67 ~~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 67 NELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SSCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CCeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 58899999999999999998886 678889999999864 234 47889999999999999999999 44544
Q ss_pred EEEEEeeccc
Q 022278 171 LVVFERRYAS 180 (300)
Q Consensus 171 vl~v~~~y~~ 180 (300)
-| +.|.|
T Consensus 147 Sl---HvY~p 153 (171)
T 3eqe_A 147 SL---HVYSP 153 (171)
T ss_dssp EE---EEEES
T ss_pred EE---EEeCC
Confidence 33 34544
No 179
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.14 E-value=1.2e-05 Score=70.93 Aligned_cols=81 Identities=14% Similarity=0.180 Sum_probs=65.4
Q ss_pred EEEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEE----c------CCcEEEeccCcEEEeCC--CC
Q 022278 92 GAYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN----A------SGVSSKLMVDSYTYLPP--NF 159 (300)
Q Consensus 92 ~~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v----~------gg~~~~L~~Gds~yfpa--~~ 159 (300)
.+.++....+.+|+.+++...||..++.|.|+...+++||+|+++.++ . .+++.+|.+|+.++|++ +.
T Consensus 67 ~r~lL~~dp~~~~~v~~l~w~PGq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~ 146 (208)
T 2gm6_A 67 QQMLLHCDSAERFSIVSFVWGPGQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGD 146 (208)
T ss_dssp EEEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBC
T ss_pred eEEEeecCCCCCEEEEEEEeCCCcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCC
Confidence 344554455678999999999999999998988999999999997754 1 23578999999999999 89
Q ss_pred ceEEee---CCeEEEE
Q 022278 160 AHSLRA---EGSATLV 172 (300)
Q Consensus 160 ~H~~~N---~~~a~vl 172 (300)
-|+++| +++|..|
T Consensus 147 iH~V~N~~~~~~avsL 162 (208)
T 2gm6_A 147 IHRVHNAYDDRVSISI 162 (208)
T ss_dssp CEEEEESCSSSCEEEE
T ss_pred eEEeccCCCCCcEEEE
Confidence 999998 3445444
No 180
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=98.13 E-value=1e-05 Score=73.58 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=67.4
Q ss_pred eCCCCC--cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEe--CCCCceeEEecCC-c
Q 022278 212 LPQAVP--FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM--APFVPQWYAALGK-T 285 (300)
Q Consensus 212 ~p~~~~--~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~--~~~~~H~~~n~G~-e 285 (300)
.|..+. ..+.++.+++.||.-+|.|-|..+|-..|||+|+...++. |....++|||+-|| +.|+.|+-.|..+ +
T Consensus 54 dP~~~~fg~l~vln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~ 133 (256)
T 2vec_A 54 DPKLLGYASLRVLNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDK 133 (256)
T ss_dssp BTTBCSCCCEEEEEEEEECTTCEEEEECCSSEEEEEEEEESEEEEEETTSCEEEEETTEEEEECCCTTCCEEEEECCSSS
T ss_pred CHhHhcCCceEeccccccCCCCccCCcCCCCcEEEEEEEeeEEEEEeCCCCEEEECCCeEEEEECCCCeEEEEEECCCCc
Confidence 354444 3567899999999999987777888889999999999999 99999999999999 7779999999765 7
Q ss_pred cEEEE
Q 022278 286 RTRYL 290 (300)
Q Consensus 286 ~~~fi 290 (300)
++.+|
T Consensus 134 ~l~~l 138 (256)
T 2vec_A 134 PLTRM 138 (256)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 88876
No 181
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.05 E-value=3.4e-05 Score=69.40 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=56.9
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v 174 (300)
..+..-+.+..||.... ..++.+||+|||+|+++++..+|+..++++||+++||+|..-.|+-.+.+|=+++
T Consensus 165 g~~~~GiW~~tpG~~~~-~~~~~~E~~~ILeG~v~lt~~~G~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yv 236 (238)
T 3myx_A 165 STLRIGVWDSTPYERIS-RPHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYA 236 (238)
T ss_dssp SSCEEEEEEECCEEBCC-EECSSCEEEEEEECCEEEEETTSCEEEECTTCEEEECTTCEEEEEESSCEEEEEE
T ss_pred CCEEEeEEEeCCCEEEC-CcCCCCEEEEEEEeEEEEEeCCCCEEEECCCCEEEECCCCEEEEEECccEEEEEE
Confidence 35666677777875321 1356789999999999999867889999999999999999999998666654443
No 182
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.95 E-value=3.5e-05 Score=69.48 Aligned_cols=72 Identities=14% Similarity=-0.044 Sum_probs=64.1
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEe--CCCCceeEEecCC-ccEEEE
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWM--APFVPQWYAALGK-TRTRYL 290 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~--~~~~~H~~~n~G~-e~~~fi 290 (300)
-+.++-.++.||.-+|.|-|...|-..|+|+|+...++. |....+++||+-|| +.|+.|+=.|..+ +++.+|
T Consensus 40 l~v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~l 115 (242)
T 1tq5_A 40 LRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLY 115 (242)
T ss_dssp EEEEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEEESSSCEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEE
T ss_pred eEeeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEEeCCCCcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Confidence 467888999999999988777888899999999999999 99999999999999 7779999999764 788776
No 183
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=97.95 E-value=2e-06 Score=74.34 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=48.2
Q ss_pred CCCCCCceEEEEEEECEEEEEEc-CCcE--EEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccCCC
Q 022278 118 ALPPHDVERFIFVVQGSAMLTNA-SGVS--SKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLENH 184 (300)
Q Consensus 118 ~~~~h~gEEf~yVLeG~v~l~v~-gg~~--~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~g~ 184 (300)
..|.|+.+|+.||++|++.+.+. +|+. ..+++||.+++|+|++|++.+.+.. .+...+-|.+.+|+
T Consensus 94 ~~H~H~~~Ei~~Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~-~~~~ir~F~~~~~w 162 (179)
T 1zrr_A 94 NEHTHGEDEVRFFVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFDMGSEP-NFTAIRIFDNPEGW 162 (179)
T ss_dssp SCBEESSCEEEEEEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCCCSSCS-SCEEEEEECCGGGE
T ss_pred cceECChheEEEEEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeeecCCCc-eEEEEEeccCCCCc
Confidence 45778889999999999988762 5676 4599999999999999999873331 22223345554553
No 184
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.89 E-value=7.8e-05 Score=65.68 Aligned_cols=85 Identities=15% Similarity=0.087 Sum_probs=66.2
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe-----C------CEEEEccCCcEEEeCC--
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-----G------DSWYPVQAGDVLWMAP-- 273 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~-----~------g~~~~v~~GD~i~~~~-- 273 (300)
..|.++-.+....+.+-.+...||..+|.| .|...-.++||+|+..... + ++...+++||++++++
T Consensus 66 y~r~lL~~dp~~~~~v~~l~w~PGq~spiH-dH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~ 144 (208)
T 2gm6_A 66 YQQMLLHCDSAERFSIVSFVWGPGQRTPIH-DHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTV 144 (208)
T ss_dssp CEEEEEEECTTSSCEEEEEEECTTCBCCSB-CCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTT
T ss_pred eeEEEeecCCCCCEEEEEEEeCCCcccCcc-cCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCC
Confidence 456666555555677779999999999985 5555567899999997653 2 3578899999999999
Q ss_pred CCceeEEec-CCccEEEE-EE
Q 022278 274 FVPQWYAAL-GKTRTRYL-LY 292 (300)
Q Consensus 274 ~~~H~~~n~-G~e~~~fi-~~ 292 (300)
|..|.+.|. ++++..-| +|
T Consensus 145 g~iH~V~N~~~~~~avsLHvY 165 (208)
T 2gm6_A 145 GDIHRVHNAYDDRVSISIHVY 165 (208)
T ss_dssp BCCEEEEESCSSSCEEEEEEE
T ss_pred CCeEEeccCCCCCcEEEEEEE
Confidence 999999999 78876655 44
No 185
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.87 E-value=0.00017 Score=58.00 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=62.2
Q ss_pred eccC-CCCCCcccCC-----ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEE
Q 022278 190 VGST-DKQPLLETPG-----EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYP 262 (300)
Q Consensus 190 ~~~~-~d~~~~~~~g-----~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~ 262 (300)
+-|+ +|+.+.+... +....|.+...+....+.+-+-..+||..- . +.+.+.|..|||+|+++++.+ |+.++
T Consensus 6 ~~~~~~~~~~~p~~pa~~r~~~~~~~~~~~~~~~g~~~~GvWe~tPG~~~-~-~~~~~~E~~~iLeG~~~lt~ddG~~~~ 83 (116)
T 3es4_A 6 IFNISDDVDLVPAMPAEGRDGGSYRRQIWQDDVENGTIVAVWMAEPGIYN-Y-AGRDLEETFVVVEGEALYSQADADPVK 83 (116)
T ss_dssp EEETTCCCSCEECCCCTTCSSCEEEEEEEECSSSSCCEEEEEEECSEEEE-E-CCCSEEEEEEEEECCEEEEETTCCCEE
T ss_pred eEccccccCcCCCCCcceeecCcceEEEEeeCCCCCEEEEEEecCCceeE-C-eeCCCcEEEEEEEeEEEEEeCCCeEEE
Confidence 4466 7776666432 233444444322222344456688899753 2 234455789999999999875 67899
Q ss_pred ccCCcEEEeCCCCceeEEecCC
Q 022278 263 VQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 263 v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
++|||.+++|+|...-..-...
T Consensus 84 l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 84 IGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp ECTTEEEEECTTCCEEEEECSC
T ss_pred ECCCCEEEECCCCeEEEEEeEE
Confidence 9999999999999876665433
No 186
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.85 E-value=3e-05 Score=69.62 Aligned_cols=70 Identities=7% Similarity=0.078 Sum_probs=57.0
Q ss_pred cceEEEEEEecCCcccCc-ceeeccceEEEEEEeeEEEEeCCE---EEEccCCcEEEeCCCCceeEEec--CCccEE
Q 022278 218 FDFNIHIMDFQPGDFLNV-KEVHYNQHGLLLLEGQGIYRLGDS---WYPVQAGDVLWMAPFVPQWYAAL--GKTRTR 288 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~-~~~H~~eh~~~iL~G~G~~~~~g~---~~~v~~GD~i~~~~~~~H~~~n~--G~e~~~ 288 (300)
.+|.+++..++......+ .|.|..-+.+||++|+|. .+|++ .+++++||+++++||..|.+... ++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~ 80 (276)
T 3gbg_A 5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENIN 80 (276)
T ss_dssp TTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEE
T ss_pred hhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceE
Confidence 468888888888877544 244555579999999999 99999 99999999999999999999877 334443
No 187
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=97.85 E-value=9.6e-05 Score=63.23 Aligned_cols=81 Identities=19% Similarity=0.223 Sum_probs=63.0
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccce-EEEEEEeeEEEEe----CC-----EEEEccCCcEEEeCCCCc
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQH-GLLLLEGQGIYRL----GD-----SWYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh-~~~iL~G~G~~~~----~g-----~~~~v~~GD~i~~~~~~~ 276 (300)
..|.++-.+. .+.+-.++..||..+|. |.|...+ .+.||+|+...+. +| ....+++||+.+.+++..
T Consensus 58 YtR~ll~~~~--~~~v~~l~W~PGq~S~i-HdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~i 134 (171)
T 3eqe_A 58 YGRNAIYRNN--ELEIIVINIPPNKETTV-HDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLI 134 (171)
T ss_dssp SEEEEEEECS--SCEEEEEEECTTCBCCE-ECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCE
T ss_pred EEEEEEecCC--CeEEEEEEECCCCCccc-ccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCE
Confidence 3455554333 45666999999999997 6777554 5669999998653 44 578899999999999999
Q ss_pred eeEEecCCccEEEE
Q 022278 277 QWYAALGKTRTRYL 290 (300)
Q Consensus 277 H~~~n~G~e~~~fi 290 (300)
|.+.|.|+++.+=|
T Consensus 135 H~V~N~~~~~aVSl 148 (171)
T 3eqe_A 135 HKMSNPTSERMVSL 148 (171)
T ss_dssp EEEECCSSSCEEEE
T ss_pred EEEECCCCCCEEEE
Confidence 99999999877654
No 188
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=97.84 E-value=4.4e-05 Score=65.29 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=48.5
Q ss_pred ecCCcccCcceeeccceEEEEEEeeEEEEeCC----EEEEccCCcEEEeCCCCceeEEecC
Q 022278 227 FQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 227 l~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g----~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
-.|++...+| +|..+|.+|+|+|...+.+.+ +...+++||+..+|+|++|+-.+.+
T Consensus 42 ~Gpn~r~d~H-~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 42 GGPNHRTDYH-DDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CSCBCCCCEE-ECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCCCcCccCc-CCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4577779885 888889999999999998754 5899999999999999999987765
No 189
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=97.81 E-value=0.00017 Score=67.43 Aligned_cols=128 Identities=14% Similarity=0.173 Sum_probs=74.0
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCC-eEEEEE----EEeeccc-cCCCC--ccee-----ec--cCCCCCCcccC----C
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEG-SATLVV----FERRYAS-LENHI--TEQI-----VG--STDKQPLLETP----G 203 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~-~a~vl~----v~~~y~~-~~g~~--p~~~-----~~--~~~d~~~~~~~----g 203 (300)
+...|++||.+|+|||+.|.+-+.. -+.+.. +-|.|-- .-|.. |+.+ +. ++...+....+ .
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~~~~Eiq~~SD~t~R~yDy~R~g~~g~pr~lhv~~~~~~l~~~~~~~~~~~~~~~~ 237 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRLDSNGSPRELHFAKAVNAATVPHVDGYIDESTESR 237 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECSSEEEEEEEESCCCCEEEECTTCBCTTSCBCCCCHHHHHHHSCSSCCCCCCCCEEEEE
T ss_pred eEEEcCCCCEEEcCCCCceEecCCCeEEEEEeCCccEEEcccccccCCCCCcccCCHHHHHhhccccCCCcccccceeec
Confidence 5789999999999999999987422 222211 1122210 00111 2211 11 11111100000 0
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCc
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~ 276 (300)
++.....+.| ..+|.+.++++.++..+ ....-..++.+++|+|.+..+|+.+++++||.+|+|+++.
T Consensus 238 ~~~~~~~~~~---~~~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 238 KGITIKTFVQ---GEYFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKYEDKTCPLKKGDHFILPAQMP 304 (319)
T ss_dssp TTEEEEEEEE---CSSCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEETTEEEEEETTCEEEECTTCC
T ss_pred CCceEEEeCC---CCEEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEECCEEEEEcCCcEEEEeCCCc
Confidence 1112223332 23677778888765432 2233447899999999999999999999999999999874
No 190
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=97.72 E-value=2.2e-05 Score=73.16 Aligned_cols=140 Identities=16% Similarity=0.055 Sum_probs=90.0
Q ss_pred CCCccCCcccccccCCCCcceeeecCCCCChhh------hhcccCCcceeeeee----eeEe----CCCCeeeccCCCCC
Q 022278 23 DGGFCSAPSILDRETSSKPMYWKVTNPTLSPSH------LQDLPGFTRSVYKRD----HALI----TPESHVLSPLPEWT 88 (300)
Q Consensus 23 ~~~~~~~~~~a~r~~lsk~~~Sqver~~~sps~------I~~~lg~trs~f~~~----~av~----~~e~~~~~~~p~~~ 88 (300)
.-.-||++++|++||.+..=||..|||+.+|-- ++++|+++--+|-+. ..|. ++++...+.-+-+.
T Consensus 240 ~ReglTQ~~LAe~TGIPq~hISeMenGKr~~IGkdeaR~LA~ALnvDYRvLLP~~~~~d~vgKT~~t~e~s~~S~r~f~s 319 (443)
T 3g7d_A 240 ARRAHTRTSAAEAAGVPPADLEAALRSPASETGLTVLRTLGRALGFDYRVLLPADDQHDGVGKTWTTIEDSRRSRRTFGT 319 (443)
T ss_dssp HHTTCCHHHHHHHHTCCHHHHHHHHHCTTSHHHHHHHHHHHHHHTCCGGGGSCCCCC--CCTTTCBCHHHHHHTCEEETT
T ss_pred HhcCCCHHHHHHHhCCCHHHHHHHhcCCcCCccHHHHHHHHHHhCCCchhccCcccccccccccccchhhcccccCccee
Confidence 467799999999999999999999999997733 999999987777652 1221 12222111122221
Q ss_pred cceEEEEecCCCC---CcEEEEEEEEcCCCcCCCC-CCCceEEEEEEECEEEEEEc-CCc--EEEeccCcEEEeCCCCce
Q 022278 89 NTLGAYLITPAMG---SHFVMYLANMQENARSALP-PHDVERFIFVVQGSAMLTNA-SGV--SSKLMVDSYTYLPPNFAH 161 (300)
Q Consensus 89 ~~~~~~L~sp~~g---~~f~~~lv~l~PG~~~~~~-~h~gEEf~yVLeG~v~l~v~-gg~--~~~L~~Gds~yfpa~~~H 161 (300)
+-+++-+.- .++.-+.+++..++ .... ..-+|.-+.|.+|++++.-. .+. +..|.++||+|+.|-++|
T Consensus 320 ----Ye~AS~A~~phlPdl~g~~l~Vd~~d-~~~DL~d~ge~hY~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H 394 (443)
T 3g7d_A 320 ----YEAASMASAAHLPDLVGSFLRVDADG-RGADLIDHAENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRH 394 (443)
T ss_dssp ----EEEEECCCCTTCTTCEEEEEEEC-------CBCCSSEEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCE
T ss_pred ----eehhhhhccccCCCceeEEEEecCCC-cchhhhhcccceEEEecCceEEEecCCCCccceEECCCCceeecccccc
Confidence 233333322 23344555554322 2222 33457777799999999762 233 358999999999999999
Q ss_pred EEeeCC
Q 022278 162 SLRAEG 167 (300)
Q Consensus 162 ~~~N~~ 167 (300)
.|+.+.
T Consensus 395 ~w~G~G 400 (443)
T 3g7d_A 395 RWHGTG 400 (443)
T ss_dssp EEESSE
T ss_pred cccCCc
Confidence 999533
No 191
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.71 E-value=0.00021 Score=63.12 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=61.7
Q ss_pred EEEecCCCCCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEE----cCC------cEEEeccCcEEEeCCC--Cc
Q 022278 93 AYLITPAMGSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTN----ASG------VSSKLMVDSYTYLPPN--FA 160 (300)
Q Consensus 93 ~~L~sp~~g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v----~gg------~~~~L~~Gds~yfpa~--~~ 160 (300)
+.++....+..|+++++...||..++.|.|+..-++.||+|+++-+. .+| ++..|.+|+.++|.++ .-
T Consensus 62 r~lL~~dp~~~f~v~~l~W~PGq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~I 141 (211)
T 3uss_A 62 QYLLHVDSRQRFSVVSFVWGPGQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDV 141 (211)
T ss_dssp EEEEEECTTSSCEEEEEEECTTCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCC
T ss_pred EEEEecCCCCCEEEEEEEECCCCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCE
Confidence 35665566678999999999999999998889999999999997754 233 3588999999999998 89
Q ss_pred eEEee
Q 022278 161 HSLRA 165 (300)
Q Consensus 161 H~~~N 165 (300)
|+++|
T Consensus 142 H~V~N 146 (211)
T 3uss_A 142 HQVSN 146 (211)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 99998
No 192
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=97.70 E-value=0.0001 Score=67.45 Aligned_cols=75 Identities=12% Similarity=0.232 Sum_probs=57.5
Q ss_pred CCcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEee
Q 022278 101 GSHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 101 g~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~ 177 (300)
|+.++.=++-+.+|.+... ....|..+++|||+..+++ +|+++.|++||++.+||+..|.|.-.+.+++|-|...
T Consensus 204 g~~~eteV~l~G~Ges~~~-~~~~d~wiWqLEGss~Vt~-~~q~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~~~ 278 (286)
T 2qnk_A 204 GDTYETQVIAYGQGSSEGL-RQNVDVWLWQLEGSSVVTM-GGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQD 278 (286)
T ss_dssp CTTSSEEEEEECSEEEEEC-CCSSCEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEEECTTCEEEEEEEC
T ss_pred cCCCceEEEEEcCCccccc-cCcCcEEEEEEcCceEEEE-CCeEEeccCCCEEEecCCCeEEEEecCCeEEEEEEEC
Confidence 3343333333666644322 2333999999999999999 9999999999999999999999998777888877654
No 193
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=97.70 E-value=0.00037 Score=67.04 Aligned_cols=126 Identities=15% Similarity=0.153 Sum_probs=73.7
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCCeEEEEEE-EeeccccCCCCccee-----ec--cCCCCC--CcccCC--ceeEEEE
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF-ERRYASLENHITEQI-----VG--STDKQP--LLETPG--EVFQLRK 210 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v-~~~y~~~~g~~p~~~-----~~--~~~d~~--~~~~~g--~~~~~~~ 210 (300)
....|++||.+|+|||++|.+-...-+.+..- .-.|+ .|..|+.+ +. ++...+ ...+.. .......
T Consensus 240 n~v~l~pGd~~fipAG~~HAy~~G~~~Eima~SDnv~R--~gltpk~~dv~~ll~vl~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T 2wfp_A 240 NVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLR--AGLTPKYIDIPELVANVKFEPKPAGELLTAPVKSGAELDF 317 (394)
T ss_dssp EEEEECTTCEEEECTTCCEEEEEEEEEEEECSSCBCEE--CSSCSSCCCHHHHHHTCCCCBCCGGGSSCCCEEETTEEEC
T ss_pred eEEECCCCCEEEcCCCCceEcCCCcEEEEeccCCcEEE--cCCcCCccCHHHHhhhccccCCCccccccccccCCceEEE
Confidence 35789999999999999999874112222210 00122 34444421 00 111111 000110 0101111
Q ss_pred eeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCc
Q 022278 211 LLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 211 l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~ 276 (300)
+.| ..+|.+.++++.+|.. . -.+.-..++.+++|+|.+..+++..++++||.+|+++++.
T Consensus 318 ~~~---~~~F~v~~~~l~~~~~-~--~~~~~~~il~v~~G~~~l~~~~~~~~l~~G~~~fvpa~~~ 377 (394)
T 2wfp_A 318 PIP---VDDFAFSLHDLALQET-S--IGQHSAAILFCVEGEAVLRKDEQRLVLKPGESAFIGADES 377 (394)
T ss_dssp CCS---SSSCEEEEEECCSSCE-E--ECCSSCEEEEEEEEEEEEEETTEEEEECTTCEEEECGGGC
T ss_pred eCC---CCEEEEEEEEEcCCeE-E--ecCCCcEEEEEEeceEEEEECCeEEEEccCcEEEEeCCCc
Confidence 222 2467888888876532 1 2333447999999999999999889999999999999853
No 194
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=97.60 E-value=9e-05 Score=61.24 Aligned_cols=56 Identities=9% Similarity=0.107 Sum_probs=50.3
Q ss_pred CCCceEEEEEEECEEEEEEcC--------CcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEee
Q 022278 121 PHDVERFIFVVQGSAMLTNAS--------GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 121 ~h~gEEf~yVLeG~v~l~v~g--------g~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~ 177 (300)
+++.+|+++||+|++++.+ . +....|++|+.+.+|.|+.|+-...++++++.|..+
T Consensus 47 H~~tDE~Fivl~G~l~i~~-rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 47 HHSTDEQFILSAGKAILIT-AEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp ESSCCEEEEEEESCEEEEE-EEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEEEES
T ss_pred CCCCCeEEEEEecEEEEEE-ecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEEEEeC
Confidence 3568999999999999998 4 347899999999999999999998889999999877
No 195
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=97.54 E-value=0.00021 Score=61.11 Aligned_cols=62 Identities=15% Similarity=0.189 Sum_probs=49.4
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--------EEEEccCCcEEEeCCCCceeEEec
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--------SWYPVQAGDVLWMAPFVPQWYAAL 282 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g--------~~~~v~~GD~i~~~~~~~H~~~n~ 282 (300)
++.+.++ =.|+....+| +|..+|-+|+|+|...+.+.+ +...+++||+..+|+|++|+=...
T Consensus 34 ~~~V~~v-gGPn~r~D~H-~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 34 GFTVMIV-GGPNERTDYH-INPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SEEEEEE-CSSBCCSCEE-ECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CEEEEEE-cCCCcCCcCc-CCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 4443333 1355668885 888889999999999988755 489999999999999999988665
No 196
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=97.47 E-value=0.00063 Score=59.52 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=60.2
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCc-eEEEEEEECEEEEEE-c---C-------CcEEEeccCcEEEe-CCCCceEEeeCCe
Q 022278 102 SHFVMYLANMQENARSALPPHDV-ERFIFVVQGSAMLTN-A---S-------GVSSKLMVDSYTYL-PPNFAHSLRAEGS 168 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~g-EEf~yVLeG~v~l~v-~---g-------g~~~~L~~Gds~yf-pa~~~H~~~N~~~ 168 (300)
.+|+.+++...||..++.|.|++ -.+++||+|+++-+. . + +++.+|.+|+..|+ |++--|++.|...
T Consensus 68 ~~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~ 147 (200)
T 3eln_A 68 GKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSH 147 (200)
T ss_dssp GTCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCS
T ss_pred CceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCC
Confidence 47899999999999999998885 899999999998874 1 1 12679999999999 7778999999332
Q ss_pred EEEEEEEeeccc
Q 022278 169 ATLVVFERRYAS 180 (300)
Q Consensus 169 a~vl~v~~~y~~ 180 (300)
.+..+-.+.|-|
T Consensus 148 ~~~avSlHvY~p 159 (200)
T 3eln_A 148 TEPAVSLHLYSP 159 (200)
T ss_dssp SCCEEEEEEEES
T ss_pred CCCEEEEEeCCC
Confidence 222333345554
No 197
>3qwg_A ESX-1 secretion-associated regulator ESPR; N-terminal helix-turn-helix motif, transcription factor, transcription; 1.99A {Mycobacterium tuberculosis} PDB: 3qf3_A 3qyx_A
Probab=97.35 E-value=5.3e-06 Score=67.29 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=42.5
Q ss_pred CCccCCcccccccC-----CCCcceeeecCCCC-Chhh-----hhcccCCcceeeeee
Q 022278 24 GGFCSAPSILDRET-----SSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKRD 70 (300)
Q Consensus 24 ~~~~~~~~~a~r~~-----lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~~ 70 (300)
+.--|+++||++++ +|++||||+|||.. .||+ |++.||++..+|+.+
T Consensus 22 ~~~lT~~elA~~~~~~G~~iS~s~is~iE~G~r~~Ps~~~l~~iA~~f~V~~~yl~~~ 79 (123)
T 3qwg_A 22 RGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDD 79 (123)
T ss_dssp TCSCCHHHHHHHHHHTTCCCCHHHHHHHHHTSSCCCCHHHHHHHHHHTTSCTHHHHCH
T ss_pred CCCCCHHHHHHHHcccCCCcCHHHHHHHHcCCCCCCCHHHHHHHHHHhCCCHHHHcCC
Confidence 34569999999998 99999999999996 8998 999999999999973
No 198
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=97.31 E-value=0.0059 Score=59.43 Aligned_cols=64 Identities=17% Similarity=0.191 Sum_probs=46.7
Q ss_pred cceEEEEEEec--CCcccCcceeeccceEEEEEEeeEEEEeCCE-E--EEccCCcEEEeCCCCceeEEec
Q 022278 218 FDFNIHIMDFQ--PGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-W--YPVQAGDVLWMAPFVPQWYAAL 282 (300)
Q Consensus 218 ~~~~~~~~tl~--PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~-~--~~v~~GD~i~~~~~~~H~~~n~ 282 (300)
.+|.+.++++. +|..... ....-..++++++|+|.+..++. . .++++||.+|++++..=.+.+.
T Consensus 355 ~eF~v~~~~~~~~~~~~~~~-~~~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 355 AEFSVLQTIFDKSKGGKQVI-EGLNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SSCEEEEEECCTTTCCEEEE-CCCSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CeEEEEEEEecCCCCceeEE-ecCCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 46888888888 4532211 12334568999999999998775 4 7999999999999954456665
No 199
>3r1f_A ESX-1 secretion-associated regulator ESPR; helix-turn-helix, transcription factor, helix-turn-helix transcription factor; 2.50A {Mycobacterium tuberculosis}
Probab=97.20 E-value=8.7e-06 Score=67.00 Aligned_cols=45 Identities=13% Similarity=0.224 Sum_probs=41.5
Q ss_pred CccCCcccccccC-----CCCcceeeecCCCC-Chhh-----hhcccCCcceeeee
Q 022278 25 GFCSAPSILDRET-----SSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 25 ~~~~~~~~a~r~~-----lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~ 69 (300)
.=-|+++||+++| +|++||||+|||.. .||+ |++.||++..+|+.
T Consensus 25 ~~~T~~elA~~~~~~G~~is~s~is~~E~G~r~~Ps~~~l~~iA~~f~V~~~yl~~ 80 (135)
T 3r1f_A 25 GPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTD 80 (135)
T ss_dssp CCCCHHHHHHHHHTTTCCCCHHHHHHHHHTSSCCCCHHHHHHHHHHHTSCTHHHHC
T ss_pred CCCCHHHHHHHHcccCCCcCHHHHHHHHCCCCCCCCHHHHHHHHHHhCCCHHHHcC
Confidence 4469999999998 99999999999996 8998 99999999999986
No 200
>4ghj_A Probable transcriptional regulator; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE; 1.75A {Vibrio vulnificus}
Probab=97.19 E-value=2.5e-05 Score=61.18 Aligned_cols=39 Identities=3% Similarity=-0.010 Sum_probs=35.9
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh---hhcccCCcce
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH---LQDLPGFTRS 65 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~---I~~~lg~trs 65 (300)
-||++||+++|+|+++||++|||..+|+. |+.+||++.+
T Consensus 50 lTQ~eLA~~~gvs~~~is~~E~G~~~~~~l~~i~~aL~~~~~ 91 (101)
T 4ghj_A 50 LTQSEVAEIAGIARKTVLNAEKGKVQLDIMIAILMALDLTEQ 91 (101)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTCCBHHHHHHHHHHTTCCGG
T ss_pred CCHHHHHHHcCCCHHHHHHHHCCCCCHHHHHHHHHHcCCCcc
Confidence 48899999999999999999999999998 8899998754
No 201
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.10 E-value=0.00076 Score=62.66 Aligned_cols=76 Identities=9% Similarity=0.178 Sum_probs=59.5
Q ss_pred EEEEEEEcCCCcCCCC-CCCceEEEEEEECEEEEEE---cCCcEEEecc-C---cEEEeCCCCceEEee--CCeEE-EEE
Q 022278 105 VMYLANMQENARSALP-PHDVERFIFVVQGSAMLTN---ASGVSSKLMV-D---SYTYLPPNFAHSLRA--EGSAT-LVV 173 (300)
Q Consensus 105 ~~~lv~l~PG~~~~~~-~h~gEEf~yVLeG~v~l~v---~gg~~~~L~~-G---ds~yfpa~~~H~~~N--~~~a~-vl~ 173 (300)
...+.++.||...+.| ++.-.|.++|++|++.+.+ ..|+.+.+.. | +.+|+|+|..|.+.| ++++. +.|
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 3456778999877777 5567799999999999943 2778899998 8 899999999999999 35555 445
Q ss_pred EEeeccc
Q 022278 174 FERRYAS 180 (300)
Q Consensus 174 v~~~y~~ 180 (300)
....|.|
T Consensus 353 ~~~~y~~ 359 (369)
T 3st7_A 353 VNEMFDP 359 (369)
T ss_dssp ESSCCCS
T ss_pred cCcccCC
Confidence 5666665
No 202
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.09 E-value=0.0033 Score=55.38 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=61.8
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe-----CCE------EEEccCCcEEEeCCC-
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-----GDS------WYPVQAGDVLWMAPF- 274 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~-----~g~------~~~v~~GD~i~~~~~- 274 (300)
..|.++-.+....+.+-.+...||..+|. |-|...-.+.||+|+-.... +|. ...+++||++++.|+
T Consensus 60 y~r~lL~~dp~~~f~v~~l~W~PGq~spi-HDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~ 138 (211)
T 3uss_A 60 YQQYLLHVDSRQRFSVVSFVWGPGQITPV-HDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRI 138 (211)
T ss_dssp CEEEEEEECTTSSCEEEEEEECTTCBCCS-BCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTT
T ss_pred eeEEEEecCCCCCEEEEEEEECCCCcCCC-CCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCC
Confidence 34677766655667777999999999998 45554457899999987643 333 478999999999998
Q ss_pred -CceeEEec-CCccE
Q 022278 275 -VPQWYAAL-GKTRT 287 (300)
Q Consensus 275 -~~H~~~n~-G~e~~ 287 (300)
.-|.+.|. |+++.
T Consensus 139 g~IH~V~N~~~d~~a 153 (211)
T 3uss_A 139 GDVHQVSNAFSDRTS 153 (211)
T ss_dssp BCCEEEEESCSSSCE
T ss_pred CCEEEEccCCCCCCE
Confidence 89999998 46753
No 203
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=97.03 E-value=3.8e-05 Score=55.29 Aligned_cols=42 Identities=10% Similarity=0.001 Sum_probs=39.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 23 sq~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ia~~l~v~~~~l~~ 69 (73)
T 3omt_A 23 TNLWLTETLDKNKTTVSKWCTNDVQPSLETLFDIAEALNVDVRELIV 69 (73)
T ss_dssp CHHHHHHHTTCCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGGBC
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 7899999999999999999999999998 99999999988875
No 204
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=96.99 E-value=0.0014 Score=58.62 Aligned_cols=71 Identities=13% Similarity=0.046 Sum_probs=58.1
Q ss_pred CcEEEEEEEEcCCCcC--CCCCCCceEEEEEEECEEEEEEcCCc---EEEeccCcEEEeCCCCceEEeeC----CeEEEE
Q 022278 102 SHFVMYLANMQENARS--ALPPHDVERFIFVVQGSAMLTNASGV---SSKLMVDSYTYLPPNFAHSLRAE----GSATLV 172 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~--~~~~h~gEEf~yVLeG~v~l~v~gg~---~~~L~~Gds~yfpa~~~H~~~N~----~~a~vl 172 (300)
+.|-+-+..+...... ..|.|+.=+++||++|+++ .+ +++ ++.+.+||.+++||+..|.+... ++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~G~~~-~i-~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~ 82 (276)
T 3gbg_A 5 KSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAK-LI-DKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVS 82 (276)
T ss_dssp TTEEEEEEEECTTCEEEEEEEECSSCEEEEESSSCEE-EE-ETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEE
T ss_pred hhhhhhhhhhhcccchhccHhhhcceEEEEEecCceE-EE-CCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEE
Confidence 4677778888776554 3346888999999999999 99 899 99999999999999999999853 556655
Q ss_pred EE
Q 022278 173 VF 174 (300)
Q Consensus 173 ~v 174 (300)
++
T Consensus 83 ~i 84 (276)
T 3gbg_A 83 VI 84 (276)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 205
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=96.98 E-value=0.0027 Score=55.45 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=59.2
Q ss_pred EEEEeeCCCCCcceEEEEEEecCCcccCcceeeccce-EEEEEEeeEEEEe-----C-------CEEEEccCCcEEEe-C
Q 022278 207 QLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQH-GLLLLEGQGIYRL-----G-------DSWYPVQAGDVLWM-A 272 (300)
Q Consensus 207 ~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh-~~~iL~G~G~~~~-----~-------g~~~~v~~GD~i~~-~ 272 (300)
..|.|+-+ ....+.+-.+...||..+|. |.|...+ .++||+|+-.... + +....+++||+.|+ +
T Consensus 58 y~R~ll~~-~~~~~~l~ll~W~PGq~Spi-HDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~ 135 (200)
T 3eln_A 58 YTRNLVDQ-GNGKFNLMILCWGEGHGSSI-HDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYIND 135 (200)
T ss_dssp CEEEEEEC-GGGTCEEEEEEECTTCBCCE-ECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECT
T ss_pred eEEEeeec-CCCceEEEEEEECCCCcCCC-ccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecC
Confidence 45666543 22346666899999999997 6776444 5899999998763 2 23678999999999 7
Q ss_pred CCCceeEEecC-CccE
Q 022278 273 PFVPQWYAALG-KTRT 287 (300)
Q Consensus 273 ~~~~H~~~n~G-~e~~ 287 (300)
++--|.+.|.+ +++.
T Consensus 136 ~~giH~V~N~s~~~~a 151 (200)
T 3eln_A 136 SIGLHRVENVSHTEPA 151 (200)
T ss_dssp TTCEEEEECCCSSCCE
T ss_pred CCcEEEEECCCCCCCE
Confidence 78899999999 5554
No 206
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=96.98 E-value=0.0014 Score=60.74 Aligned_cols=122 Identities=14% Similarity=0.076 Sum_probs=69.9
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCCeEEEEEE-EeeccccCCCCcceeec--cCCCCCCcccCCceeEEEEeeCCCCCcc
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVF-ERRYASLENHITEQIVG--STDKQPLLETPGEVFQLRKLLPQAVPFD 219 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v-~~~y~~~~g~~p~~~~~--~~~d~~~~~~~g~~~~~~~l~p~~~~~~ 219 (300)
+...|++||.+|+|||+.|.+-...-+.+-.- .-.|.|.+=. -+..+. ++...+....+. . ..+.| ..+
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~G~~~Eiqa~SD~t~~pr~l~-v~~~~~vl~~~~~~~~~~~~-~---~~~~~---~~~ 229 (300)
T 1zx5_A 158 NTFETTPYDTFVIRPGIPHAGEGLRVLEVSSNSTLAYFFNEND-WEKVKKVLNTKKVEEFEVKG-K---KGMAE---TEN 229 (300)
T ss_dssp EEEECCTTCEEEECTTCCEEEESEEEEEEEESCCCCEESSTTT-HHHHHHHCCCSBCCGGGTBC-B---TTEEE---CSS
T ss_pred ceeECCCCCEEEcCCCCceEcCCCCeeeecccCCceeecccCC-HHHHHhhccccCCCccccce-e---EEcCC---CCe
Confidence 46889999999999999999874112222110 0012222210 000001 010000000000 0 00112 236
Q ss_pred eEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCce
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQ 277 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H 277 (300)
|.+.++++.+...+ .. .-. .++.+++| |.+..+|+..++++||.+|+|+++..
T Consensus 230 F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~~~~~~l~~G~~~~ipa~~~~ 283 (300)
T 1zx5_A 230 FGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRGKETADLHRGYSCLVPASTDS 283 (300)
T ss_dssp EEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEESSSEEEECTTCEEEECTTCCE
T ss_pred EEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeCCeEEEEccceEEEEeCCCce
Confidence 77888888753332 22 334 68999999 99999998999999999999999854
No 207
>2ewt_A BLDD, putative DNA-binding protein; the DNA-binding domain of BLDD; 1.81A {Streptomyces coelicolor}
Probab=96.97 E-value=3.3e-05 Score=54.98 Aligned_cols=42 Identities=10% Similarity=-0.010 Sum_probs=38.2
Q ss_pred cCCcccccccC--CCCcceeeecCCCCChhh-----hhcccCCcceeee
Q 022278 27 CSAPSILDRET--SSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYK 68 (300)
Q Consensus 27 ~~~~~~a~r~~--lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~ 68 (300)
-|+++||+++| +|++.+|++|+|...|+. |+++||++...|+
T Consensus 22 lsq~~lA~~~g~~is~~~i~~~e~g~~~~~~~~l~~la~~l~v~~~~l~ 70 (71)
T 2ewt_A 22 LSLHGVEEKSQGRWKAVVVGSYERGDRAVTVQRLAELADFYGVPVQELL 70 (71)
T ss_dssp CCHHHHHHHTTTSSCHHHHHHHHHTCSCCCHHHHHHHHHHHTSCGGGGC
T ss_pred CCHHHHHHHHCCcCCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHc
Confidence 37899999999 999999999999999987 8999999988775
No 208
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.91 E-value=3.8e-05 Score=55.98 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=39.3
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+++||+++|+|++.||++|+|...|+. |+++||++...++.
T Consensus 17 sq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~l~~ 63 (77)
T 2k9q_A 17 TAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLRSKGVDLNALFD 63 (77)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTCCSCCHHHHHHHHHHHTTCCHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCcCHHHHhC
Confidence 7889999999999999999999999987 99999999998876
No 209
>3s8q_A R-M controller protein; protein-DNA complex, helix-turn-helix; HET: DNA; 2.10A {Enterobacter SP} SCOP: a.35.1.0 PDB: 3clc_A* 3ufd_A*
Probab=96.91 E-value=3.7e-05 Score=56.58 Aligned_cols=43 Identities=2% Similarity=-0.007 Sum_probs=39.7
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.||++|+|...|+. |+++|+++...++.
T Consensus 25 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~v~~~~l~~ 72 (82)
T 3s8q_A 25 MTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFE 72 (82)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTCCCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred CCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 38899999999999999999999999998 99999999888765
No 210
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=96.85 E-value=3.7e-05 Score=56.62 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=38.6
Q ss_pred CCcccccccCCCCcceeeecCC-CCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNP-TLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~-~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|+++||++|+| ...|+. |+++||++...++.
T Consensus 25 tq~elA~~~gis~~~is~~E~G~~~~p~~~~l~~ia~~l~v~~~~l~~ 72 (78)
T 3qq6_A 25 SLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLD 72 (78)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTSCCCCBHHHHHHHHHHHTCCHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 7899999999999999999999 889987 99999999888765
No 211
>2ofy_A Putative XRE-family transcriptional regulator; transcription regulator, structural genomics, PS protein structure initiative; 1.70A {Rhodococcus SP} SCOP: a.35.1.3
Probab=96.84 E-value=4.6e-05 Score=56.57 Aligned_cols=42 Identities=10% Similarity=0.071 Sum_probs=39.3
Q ss_pred CCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.||++|+|.. .|+. |+++||++...++.
T Consensus 29 sq~~lA~~~gis~~~is~~E~g~~~~p~~~~l~~ia~~l~v~~~~l~~ 76 (86)
T 2ofy_A 29 SMVTVAFDAGISVETLRKIETGRIATPAFFTIAAVARVLDLSLDDVAA 76 (86)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCCSSCBHHHHHHHHHHTTCCHHHHHT
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCCCCCHHHHHHHHHHhCCCHHHHhc
Confidence 899999999999999999999998 8987 99999999988875
No 212
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=96.81 E-value=7.6e-05 Score=53.29 Aligned_cols=42 Identities=10% Similarity=-0.118 Sum_probs=38.1
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYK 68 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~ 68 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...++
T Consensus 27 ~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~l~~~l~~~~~~l~ 73 (74)
T 1y7y_A 27 LSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF 73 (74)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTSCGGGGC
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHHc
Confidence 47899999999999999999999999987 8999999887765
No 213
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=96.81 E-value=6.3e-05 Score=55.27 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=38.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.+|++|||...|+. |+++||++...|++
T Consensus 27 tq~~lA~~~gvs~~~is~~e~g~~~~~~~~~~~ia~~l~v~~~~l~~ 73 (80)
T 3kz3_A 27 SYESVADKMGMGQSAVAALFNGINALNAYNAALLAKILKVSVEEFSP 73 (80)
T ss_dssp CHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGTCH
T ss_pred CHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhH
Confidence 7899999999999999999999999987 99999999887765
No 214
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=96.81 E-value=0.0062 Score=50.23 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=55.8
Q ss_pred ceEEEEEEecCCcc---cCcceeeccc-eEEEEEEeeEEEEeC--------CEEEEccCCcEEEeCCCCceeEEecCCcc
Q 022278 219 DFNIHIMDFQPGDF---LNVKEVHYNQ-HGLLLLEGQGIYRLG--------DSWYPVQAGDVLWMAPFVPQWYAALGKTR 286 (300)
Q Consensus 219 ~~~~~~~tl~PG~~---~p~~~~H~~e-h~~~iL~G~G~~~~~--------g~~~~v~~GD~i~~~~~~~H~~~n~G~e~ 286 (300)
.+.|.+..+.|... +..-|.|..+ |.+++|+|+.++.+. +....+++|+++.+|.|+.|--.+. ++
T Consensus 24 ~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e 101 (140)
T 3d0j_A 24 KWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KD 101 (140)
T ss_dssp SEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TT
T ss_pred CEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--Cc
Confidence 35566787788733 3445677666 778999999999987 4479999999999999999977763 44
Q ss_pred EEEEEEeec
Q 022278 287 TRYLLYKDV 295 (300)
Q Consensus 287 ~~fi~~kd~ 295 (300)
+..++.-+.
T Consensus 102 ~~vLLiEp~ 110 (140)
T 3d0j_A 102 TKMMYVQDS 110 (140)
T ss_dssp CEEEEEEES
T ss_pred eEEEEEEeC
Confidence 555555443
No 215
>3g5g_A Regulatory protein; transcriptional regulator, helix-turn-helix, restriction- modification, transcription regulator; 2.80A {Enterobacter SP} PDB: 3fya_A
Probab=96.78 E-value=5.7e-05 Score=58.47 Aligned_cols=42 Identities=2% Similarity=0.000 Sum_probs=39.4
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+++||+++|+|++.||++|||...|+. |+++||++...++.
T Consensus 43 tq~elA~~~gis~~~is~iE~G~~~ps~~~l~~ia~~l~v~~~~l~~ 89 (99)
T 3g5g_A 43 TQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFE 89 (99)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 7899999999999999999999999998 99999999988875
No 216
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=96.76 E-value=7.5e-05 Score=56.87 Aligned_cols=41 Identities=10% Similarity=-0.036 Sum_probs=37.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.||++|+|.. |+. |+++|+++..+++.
T Consensus 39 Tq~eLA~~~GiS~~tis~iE~G~~-~s~~~l~kIa~~L~v~~~~L~~ 84 (88)
T 3t76_A 39 KKGELREAVGVSKSTFAKLGKNEN-VSLTVLLAICEYLNCDFGDIIE 84 (88)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCC-CCHHHHHHHHHHHTCCGGGTCE
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCC-cCHHHHHHHHHHHCcCHHHHhc
Confidence 889999999999999999999976 777 99999999998875
No 217
>1neq_A DNA-binding protein NER; NMR {Enterobacteria phage MU} SCOP: a.35.1.2 PDB: 1ner_A
Probab=96.71 E-value=7.2e-05 Score=55.17 Aligned_cols=43 Identities=7% Similarity=-0.078 Sum_probs=38.9
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh---hhcccCCcceeeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH---LQDLPGFTRSVYKRD 70 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~---I~~~lg~trs~f~~~ 70 (300)
-|+.+||+++|+|++.+|+++++ .+|+. |+++||++...++..
T Consensus 23 lT~~~LA~~~Gvs~stls~~~~~-~~p~~~~~IA~aLgv~~~~L~~~ 68 (74)
T 1neq_A 23 LSLSALSRQFGYAPTTLANALER-HWPKGEQIIANALETKPEVIWPS 68 (74)
T ss_dssp CCHHHHHHHHSSCHHHHHHTTTS-SCHHHHHHHHHHTTSCHHHHCTT
T ss_pred CCHHHHHHHHCcCHHHHHHHHcC-CCccHHHHHHHHHCcCHHHHhHH
Confidence 48899999999999999999998 57876 999999999998874
No 218
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=96.65 E-value=6.3e-05 Score=55.32 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=39.2
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 28 ltq~elA~~~gis~~~is~~e~g~~~~~~~~l~~l~~~l~~~~~~l~~ 75 (83)
T 3f6w_A 28 ITQKELAARLGRPQSFVSKTENAERRLDVIEFMDFCRGIGTDPYALLS 75 (83)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHcCCCHHHHHH
Confidence 37899999999999999999999999987 99999999887765
No 219
>2wus_R RODZ, putative uncharacterized protein; structural protein, cell WALL morphogenesis, bacterial cytos bacterial actin; 2.90A {Thermotoga maritima}
Probab=96.64 E-value=8e-05 Score=59.22 Aligned_cols=43 Identities=2% Similarity=-0.064 Sum_probs=37.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCCh------hh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSP------SH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sp------s~-----I~~~lg~trs~f~~ 69 (300)
-||++||+++|+|+++||++|+|...| +. |+++||++...++.
T Consensus 21 lSq~eLA~~~gis~~~is~iE~G~~~~~p~~~~~~~~l~~iA~~Lgv~~~~L~~ 74 (112)
T 2wus_R 21 ITLLDASLFTNINPSKLKRIEEGDLKGLDAEVYIKSYIKRYSEFLELSPDEMLK 74 (112)
T ss_dssp CCHHHHHHHSSCCHHHHHHHHHTCCTTSSCHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCcchhHHHHHHHHHHHHhCcCHHHHHH
Confidence 478999999999999999999998865 22 88999999988876
No 220
>3vk0_A NHTF, transcriptional regulator; HTH motif, XRE transcription factor, DNA binding protein; 1.88A {Neisseria meningitidis}
Probab=96.63 E-value=7.7e-05 Score=58.77 Aligned_cols=43 Identities=7% Similarity=-0.052 Sum_probs=40.2
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.||++|+|...|+. |+++||++...++.
T Consensus 35 ltq~elA~~~gis~~~is~~E~G~~~p~~~~l~~ia~~l~v~~~~l~~ 82 (114)
T 3vk0_A 35 WSQEELARQCGLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLL 82 (114)
T ss_dssp CCHHHHHHHHTCCHHHHHHHTTTCCCCCHHHHHHHHHHHTSCHHHHTS
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhC
Confidence 38999999999999999999999999998 99999999998875
No 221
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=96.63 E-value=9.5e-05 Score=51.45 Aligned_cols=43 Identities=9% Similarity=-0.031 Sum_probs=38.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.++|+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 15 ~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~i~~~l~~~~~~l~~ 62 (66)
T 2xi8_A 15 ISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQ 62 (66)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSCCCCHHHHHHHHHHTTSCHHHHEE
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 37899999999999999999999999987 89999999887765
No 222
>3eus_A DNA-binding protein; structural genomics, PSI2,MCSG, protein structure initiative, midwest center for structural genomic binding; 1.80A {Silicibacter pomeroyi}
Probab=96.62 E-value=0.00015 Score=54.22 Aligned_cols=38 Identities=8% Similarity=-0.067 Sum_probs=34.3
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcc
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTR 64 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~tr 64 (300)
-|+++||+++|+|+++||++|+|...|+. |+++||++-
T Consensus 28 ltq~elA~~~gis~~~is~~E~G~~~p~~~~l~~ia~~l~v~~ 70 (86)
T 3eus_A 28 LTQADLAERLDKPQSFVAKVETRERRLDVIEFAKWMAACEGLD 70 (86)
T ss_dssp CCHHHHHHHTTCCHHHHHHHHTTSSCCBHHHHHHHHHHTTCGG
T ss_pred CCHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHcCCCc
Confidence 48899999999999999999999999998 888888753
No 223
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=96.56 E-value=8.1e-05 Score=53.80 Aligned_cols=43 Identities=5% Similarity=-0.027 Sum_probs=39.2
Q ss_pred cCCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.||++|+|.. .|+. |+++||++...++.
T Consensus 21 ~sq~~lA~~~gis~~~i~~~e~g~~~~~~~~~l~~ia~~l~~~~~~l~~ 69 (78)
T 3b7h_A 21 LTINRVATLAGLNQSTVNAMFEGRSKRPTITTIRKVCGTLGISVHDFFD 69 (78)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHCTTCCCCCHHHHHHHHHHHTCCHHHHTC
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCHHHHhc
Confidence 3789999999999999999999999 8887 99999999988875
No 224
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=96.54 E-value=9.1e-05 Score=51.87 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=37.4
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYK 68 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~ 68 (300)
.|+.+||+++|+|++.+|++|+|...|+. |++++|++...++
T Consensus 19 ~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~i~~~l~~~~~~l~ 65 (68)
T 2r1j_L 19 IRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLL 65 (68)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHh
Confidence 37899999999999999999999999987 8899998877654
No 225
>1lmb_3 Protein (lambda repressor); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.80A {Enterobacteria phage lambda} SCOP: a.35.1.2 PDB: 1lrp_A 1rio_A 1lli_A*
Probab=96.52 E-value=0.00013 Score=54.61 Aligned_cols=42 Identities=12% Similarity=0.040 Sum_probs=39.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.||++|+|...|+. |+++||++...|+.
T Consensus 32 sq~~lA~~~gis~~~is~~e~g~~~~~~~~l~~ia~~l~v~~~~l~~ 78 (92)
T 1lmb_3 32 SQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSP 78 (92)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGTCH
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCCCHHHHhh
Confidence 7899999999999999999999999987 99999999988875
No 226
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=96.51 E-value=0.0001 Score=53.04 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=38.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 24 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~la~~l~~~~~~l~~ 71 (77)
T 2b5a_A 24 VSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFR 71 (77)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHHhc
Confidence 47899999999999999999999999987 89999998887764
No 227
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=96.50 E-value=0.0001 Score=52.91 Aligned_cols=43 Identities=7% Similarity=-0.036 Sum_probs=39.1
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 19 ls~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~~~~~~l~~ 66 (76)
T 1adr_A 19 IRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLK 66 (76)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 37899999999999999999999999987 89999999888764
No 228
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.48 E-value=0.0076 Score=49.80 Aligned_cols=74 Identities=15% Similarity=0.314 Sum_probs=54.0
Q ss_pred EEEEEcCCCcCCCC-CCCceEEEEEEECEEEEEEcCCc---EEEeccCcE-EEeCCCCceEEee-CCeEEEEEE-Eeecc
Q 022278 107 YLANMQENARSALP-PHDVERFIFVVQGSAMLTNASGV---SSKLMVDSY-TYLPPNFAHSLRA-EGSATLVVF-ERRYA 179 (300)
Q Consensus 107 ~lv~l~PG~~~~~~-~h~gEEf~yVLeG~v~l~v~gg~---~~~L~~Gds-~yfpa~~~H~~~N-~~~a~vl~v-~~~y~ 179 (300)
++...+||..-+.| +...++++++++|++++.+.+|+ ++.|..... +++||++.|.+.+ ...|.++++ +.+|.
T Consensus 38 ~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~avllvlas~~Yd 117 (141)
T 2pa7_A 38 YIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSDCVMMVLASDYYD 117 (141)
T ss_dssp EEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTTCEEEEEESSCCC
T ss_pred EEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCCeEEEEECCCCcC
Confidence 34445577666666 34568999999999999995553 578887776 8999999999998 555666666 34444
Q ss_pred c
Q 022278 180 S 180 (300)
Q Consensus 180 ~ 180 (300)
|
T Consensus 118 ~ 118 (141)
T 2pa7_A 118 E 118 (141)
T ss_dssp G
T ss_pred H
Confidence 4
No 229
>3mlf_A Transcriptional regulator; structural genomics, helix-turn-helix XRE-family like protei transcription regulator, PSI-2; 2.60A {Staphylococcus aureus subsp}
Probab=96.47 E-value=0.00016 Score=57.05 Aligned_cols=43 Identities=5% Similarity=-0.160 Sum_probs=39.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
.|+.+||+++|+|++.||++|+|...|+. |+++||++...++.
T Consensus 37 ltq~elA~~~gis~~~is~~E~G~~~ps~~~l~~ia~~l~v~~~~l~~ 84 (111)
T 3mlf_A 37 LTQKELGDLFKVSSRTIQNMEKDSTNIKDSLLSKYMSAFNVKYDDIFL 84 (111)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHCCTTCCHHHHHHHHHHHTCCGGGEEC
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHHhC
Confidence 47899999999999999999999999988 99999999998875
No 230
>3f52_A CLP gene regulator (CLGR); helix-turn-helix motif, transcriptional ACTI human pathogen, transcription activator; 1.75A {Corynebacterium glutamicum} PDB: 3f51_A
Probab=96.47 E-value=0.00012 Score=57.61 Aligned_cols=43 Identities=7% Similarity=-0.065 Sum_probs=40.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.||++|+|...|+. |+++||++...++.
T Consensus 42 lsq~~lA~~~gis~~~is~~E~g~~~~~~~~l~~la~~l~v~~~~l~~ 89 (117)
T 3f52_A 42 VTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHALGASVADVLI 89 (117)
T ss_dssp CCHHHHHHHTTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHhCCCHHHHHh
Confidence 38899999999999999999999999998 99999999988875
No 231
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.41 E-value=0.015 Score=47.97 Aligned_cols=80 Identities=14% Similarity=0.075 Sum_probs=62.4
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC----EEEEccCCcE-EEeCCCCceeEEecCCccEEEEEEe
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD----SWYPVQAGDV-LWMAPFVPQWYAALGKTRTRYLLYK 293 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g----~~~~v~~GD~-i~~~~~~~H~~~n~G~e~~~fi~~k 293 (300)
.+.+-++...||..-+.|-|...++.+++++|...+.+++ +.+.+...+. +++||++.|++.|.++. .+.+..|
T Consensus 34 kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~-avllvla 112 (141)
T 2pa7_A 34 KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSD-CVMMVLA 112 (141)
T ss_dssp CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTT-CEEEEEE
T ss_pred cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCC-eEEEEEC
Confidence 4666677778999999865556668899999999998765 3455555554 99999999999999885 8888888
Q ss_pred ecCCCC
Q 022278 294 DVNRNP 299 (300)
Q Consensus 294 d~nr~~ 299 (300)
+-.-||
T Consensus 113 s~~Yd~ 118 (141)
T 2pa7_A 113 SDYYDE 118 (141)
T ss_dssp SSCCCG
T ss_pred CCCcCH
Confidence 765554
No 232
>4ich_A Transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, transcription RE; 1.95A {Saccharomonospora viridis}
Probab=96.41 E-value=0.00052 Score=62.47 Aligned_cols=43 Identities=14% Similarity=-0.024 Sum_probs=0.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.||++|||...|+. |+++||++...|+.
T Consensus 44 ~t~~~la~~~g~s~~~is~~e~g~~~p~~~~l~~ia~~l~~~~~~l~~ 91 (311)
T 4ich_A 44 GAQREFAAAIGLDESKLSKSLNGTRRFSPHELVRIAEHSGVTVNWLIN 91 (311)
T ss_dssp ------------------------------------------------
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHHCCChhhhhc
Confidence 47899999999999999999999999988 99999999998876
No 233
>3fym_A Putative uncharacterized protein; HTH DNA binding, DNA binding protein; 1.00A {Staphylococcus aureus subsp}
Probab=96.40 E-value=0.00011 Score=59.59 Aligned_cols=43 Identities=7% Similarity=0.095 Sum_probs=38.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----------hhcccCCcceeeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----------LQDLPGFTRSVYKRD 70 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----------I~~~lg~trs~f~~~ 70 (300)
||++||+++|+|++++|++|||...|+. |+++||++...++..
T Consensus 18 tq~elA~~~gis~~~is~iE~g~~~~~~~~~~~~~~l~~ia~~L~v~~~~l~~~ 71 (130)
T 3fym_A 18 TLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQA 71 (130)
T ss_dssp CHHHHHHHHCCCHHHHHHHHTTCGGGSSSGGGHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHCCCCCCCchhhhHHHHHHHHHHHhCCCHHHHHHH
Confidence 8899999999999999999999976531 899999999988863
No 234
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=96.40 E-value=0.00016 Score=55.25 Aligned_cols=42 Identities=10% Similarity=-0.028 Sum_probs=39.6
Q ss_pred CCcccccccCCCCcc----eeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPM----YWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~----~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+++||+++|+|++. ||++|+|...|+. |+++||++...|+.
T Consensus 16 sq~~lA~~~gis~~~~~~~is~~E~g~~~p~~~~l~~la~~l~v~~~~l~~ 66 (98)
T 3lfp_A 16 SQEKLGVLAGIDEASASARMNQYEKGKHAPDFEMANRLAKVLKIPVSYLYT 66 (98)
T ss_dssp CHHHHHHHTTCCHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHTSCGGGGGC
T ss_pred CHHHHHHHhCCCcchhhhHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 789999999999999 9999999999998 99999999999876
No 235
>3ivp_A Putative transposon-related DNA-binding protein; APC62618, clostridium diffic structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile}
Probab=96.37 E-value=0.00011 Score=58.60 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=39.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|+++||++|+|...|+. |+++||++...++.
T Consensus 27 sq~~lA~~~gis~~~is~~E~g~~~p~~~~l~~ia~~l~v~~~~l~~ 73 (126)
T 3ivp_A 27 TREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLLNVSVDEFFL 73 (126)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHSCCCCCHHHHHHHHHHHTCCSHHHHS
T ss_pred CHHHHHHHhCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 8899999999999999999999999998 99999999998876
No 236
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.35 E-value=0.033 Score=50.84 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=69.7
Q ss_pred CCceeEEEEeeCCCC----CcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEeCC--C
Q 022278 202 PGEVFQLRKLLPQAV----PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAP--F 274 (300)
Q Consensus 202 ~g~~~~~~~l~p~~~----~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~--~ 274 (300)
+|.++.++.++|... +.-..+.- ...||.-+|.|-|..+|=.-|+|+|+...++. |..-.+++||+-||.+ |
T Consensus 18 ~G~g~~v~R~~~~~~~~~~gpf~~ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~DS~Gn~~~i~~GdvQwMtAG~G 96 (277)
T 2p17_A 18 NSPIHRSGSVLEPGNWQEYDPFLLLME-DIFERGTFDVHPHRGIETVTYVISGELEHFDSKAGHSTLGPGDVQWMTAGRG 96 (277)
T ss_dssp EETTEEEEEEECSSCHHHHTTEEEEEE-EEECTTCCCCEEECSEEEEEEEEESCEEEEETTTEEEEECTTCEEEEECTTC
T ss_pred cCCCeEEeecCCcccccccCCEEEEec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEeeCCCCceEECCCeEEEEeCCCC
Confidence 355567777776432 23345666 77899989988777888888999999999987 7889999999999977 5
Q ss_pred CceeEEecCCccEEEE
Q 022278 275 VPQWYAALGKTRTRYL 290 (300)
Q Consensus 275 ~~H~~~n~G~e~~~fi 290 (300)
+-|+=.|..++++.+|
T Consensus 97 I~HsE~~~~~~~~~~l 112 (277)
T 2p17_A 97 VVHKEDPASGSTVHSL 112 (277)
T ss_dssp EEEEEEECTTCCEEEE
T ss_pred EEEEeecCCCCCEEEE
Confidence 6799999877888775
No 237
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=96.33 E-value=0.021 Score=52.60 Aligned_cols=88 Identities=11% Similarity=-0.051 Sum_probs=70.9
Q ss_pred CceeEEEEeeCC-C-CC--cceEEEEEEecCCcccCcceeeccceEEEEE-EeeEEEEeC-CEEEEccCCcEEEeCCC--
Q 022278 203 GEVFQLRKLLPQ-A-VP--FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLL-EGQGIYRLG-DSWYPVQAGDVLWMAPF-- 274 (300)
Q Consensus 203 g~~~~~~~l~p~-~-~~--~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL-~G~G~~~~~-g~~~~v~~GD~i~~~~~-- 274 (300)
|.++.++.++|. + .. .-..+.-+.+.|+.-+|.|-|...|-.-|++ +|+...++. |..-.+++||+-||.+|
T Consensus 19 G~G~~v~R~~~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn~~~i~~GdvQwMtAG~G 98 (290)
T 1j1l_A 19 GVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRG 98 (290)
T ss_dssp TBTEEEEECTTSTTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEEETTSCEEEECTTCEEEEECTTC
T ss_pred CCCeEEEEeCCCccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEeeCCCCceEECCCcEEEEeCCCC
Confidence 556777777753 2 22 3467889999999888887777888788999 999999987 78899999999999765
Q ss_pred CceeEEecCCccEEEE
Q 022278 275 VPQWYAALGKTRTRYL 290 (300)
Q Consensus 275 ~~H~~~n~G~e~~~fi 290 (300)
+-|+=.|..++++.+|
T Consensus 99 I~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 99 ILHAEMPCSEEPAHGL 114 (290)
T ss_dssp EEEEEEECSSSCEEEE
T ss_pred EEEEeEcCCCCCEEEE
Confidence 6798889877788775
No 238
>2o38_A Hypothetical protein; alpha-beta, helix-turn-helix, structural genomics, PSI-2, PR structure initiative; 1.83A {Rhodopseudomonas palustris} SCOP: a.35.1.13
Probab=96.33 E-value=0.00028 Score=56.67 Aligned_cols=44 Identities=18% Similarity=0.059 Sum_probs=38.8
Q ss_pred cCCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCcceeeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKRD 70 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~~ 70 (300)
-||++||+++|+|++.||++|||.. .|+. |+++||++...++..
T Consensus 54 lTQ~eLA~~lGis~~~Is~iE~G~~~~~s~~~l~~ia~~Lgv~~~~l~~~ 103 (120)
T 2o38_A 54 LSQAAAAARLGINQPKVSALRNYKLEGFSVERLMTLLNALDQDVEIVIRK 103 (120)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTCCTTCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHhCCCcEEeecC
Confidence 3789999999999999999999998 8886 899999988877653
No 239
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=96.31 E-value=0.00023 Score=52.74 Aligned_cols=42 Identities=7% Similarity=-0.007 Sum_probs=37.3
Q ss_pred CCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.+|++|+|.. .|+. |+++||++...++.
T Consensus 33 sq~elA~~~gis~~~is~~e~g~~~~~~~~~l~~la~~l~~~~~~l~~ 80 (83)
T 2a6c_A 33 TQFKAAELLGVTQPRVSDLMRGKIDLFSLESLIDMITSIGLKVEINIK 80 (83)
T ss_dssp CHHHHHHHHTSCHHHHHHHHTTCGGGCCHHHHHHHHHHTTCCCCCCCC
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHcCCCeEEEeC
Confidence 789999999999999999999998 4876 89999998876654
No 240
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=96.31 E-value=0.00023 Score=51.08 Aligned_cols=43 Identities=9% Similarity=0.028 Sum_probs=39.4
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
.|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 24 ~s~~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~ia~~l~~~~~~l~~ 71 (76)
T 3bs3_A 24 RTNRWLAEQMGKSENTISRWCSNKSQPSLDMLVKVAELLNVDPRQLIN 71 (76)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGGBC
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 47899999999999999999999999987 99999999988875
No 241
>3trb_A Virulence-associated protein I; mobIle and extrachromosomal element functions, DNA binding P; 2.00A {Coxiella burnetii}
Probab=96.25 E-value=0.00019 Score=56.21 Aligned_cols=43 Identities=16% Similarity=0.067 Sum_probs=39.3
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
.|+.+||+++|+|++.||++|||...|+. |+++||++...|..
T Consensus 28 ltq~eLA~~lGis~~~is~ie~G~~~~s~~~~~kla~~lgvs~~~ll~ 75 (104)
T 3trb_A 28 MSANQLAKHLAIPTNRVTAILNGARSITADTALRLAKFFGTTPEFWLN 75 (104)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 57899999999999999999999999888 99999999887764
No 242
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=96.24 E-value=0.00017 Score=54.55 Aligned_cols=43 Identities=14% Similarity=0.023 Sum_probs=39.6
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.||++|+|...|+. |+++||++...++.
T Consensus 23 lsq~~lA~~~gis~~~is~~e~G~~~p~~~~l~~ia~~l~v~~~~l~~ 70 (94)
T 2kpj_A 23 KTQLEIAKSIGVSPQTFNTWCKGIAIPRMGKVQALADYFNINKSDLIE 70 (94)
T ss_dssp SCHHHHHHHHTCCHHHHHHHHTTSCCCCHHHHHHHHHHHTCCTHHHHS
T ss_pred CCHHHHHHHHCcCHHHHHHHHhCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 47899999999999999999999999987 99999999998876
No 243
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=96.23 E-value=0.00019 Score=53.92 Aligned_cols=43 Identities=5% Similarity=0.026 Sum_probs=38.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.||++|+|...|+. |+++|+++...++.
T Consensus 27 lsq~~lA~~~gis~~~is~~e~g~~~p~~~~l~~la~~l~v~~~~l~~ 74 (91)
T 1x57_A 27 LTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGKDI 74 (91)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHTCSCCCHHHHHHHHHHHTBCCSSTTT
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHcc
Confidence 37899999999999999999999999987 89999999888654
No 244
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=96.20 E-value=0.00023 Score=52.63 Aligned_cols=43 Identities=2% Similarity=-0.004 Sum_probs=38.6
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.||++|+|...|+. |+++||++...+..
T Consensus 26 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~i~~~l~~~~~~l~~ 73 (88)
T 2wiu_B 26 WTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDA 73 (88)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHCGGGCBHHHHHHHHHHTTCEEEEEC-
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHhcc
Confidence 47899999999999999999999999987 99999999888763
No 245
>3op9_A PLI0006 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, transcription regulat; HET: MSE; 1.90A {Listeria innocua}
Probab=96.19 E-value=0.00015 Score=56.78 Aligned_cols=42 Identities=7% Similarity=-0.087 Sum_probs=39.5
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 24 sq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~la~~l~v~~~~l~~ 70 (114)
T 3op9_A 24 KNHQIAELLNVQTRTVAYYMSGETKPDIEKLIRLATYFHLSIDELVG 70 (114)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTSSCCCHHHHHHHHHHHTCCHHHHHT
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHHhc
Confidence 7899999999999999999999999998 99999999998876
No 246
>1zug_A Phage 434 CRO protein; gene regulating protein, transcription regulation; NMR {Phage 434} SCOP: a.35.1.2 PDB: 2cro_A 3cro_L*
Probab=96.04 E-value=0.00022 Score=50.35 Aligned_cols=43 Identities=0% Similarity=-0.088 Sum_probs=37.7
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.+|++|+|...|.. |++.||++...++.
T Consensus 17 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~l~~i~~~l~~~~~~l~~ 63 (71)
T 1zug_A 17 MTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQY 63 (71)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTCCSSCSTHHHHHHHTTSCHHHHHH
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCChHHHHHHHHHHCCCHHHHhC
Confidence 37899999999999999999999887755 88999998887764
No 247
>1r69_A Repressor protein CI; gene regulating protein; 2.00A {Phage 434} SCOP: a.35.1.2 PDB: 1pra_A 1per_L 1rpe_L* 2or1_L* 1r63_A 2r63_A 1sq8_A
Probab=96.02 E-value=0.00025 Score=49.80 Aligned_cols=43 Identities=7% Similarity=0.059 Sum_probs=38.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~f~~ 69 (300)
.|+.+||+++|+|++.+|++|+|...|+. |++.||++...++.
T Consensus 15 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~l~~la~~l~~~~~~l~~ 61 (69)
T 1r69_A 15 LNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLN 61 (69)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSCSSCTTHHHHHHHTTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCchHHHHHHHHHCcCHHHHhC
Confidence 37899999999999999999999988875 88999998887764
No 248
>3kxa_A NGO0477 protein, putative uncharacterized protein; NEW protein fold, OPPF, STRU genomics, oxford protein production facility; 2.80A {Neisseria gonorrhoeae}
Probab=95.96 E-value=0.00024 Score=58.53 Aligned_cols=43 Identities=12% Similarity=0.162 Sum_probs=39.8
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++++|++|+|...|+. |+++||++...|+.
T Consensus 82 lTq~elA~~lGis~s~is~~E~G~~~ps~~~l~~la~~lgv~~~~l~~ 129 (141)
T 3kxa_A 82 FTQSELATAAGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRA 129 (141)
T ss_dssp CCHHHHHHHTTCCHHHHHHHHHTCSCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCCCHHHHHH
Confidence 38899999999999999999999999988 99999999988875
No 249
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=95.96 E-value=0.05 Score=46.39 Aligned_cols=72 Identities=17% Similarity=0.024 Sum_probs=54.6
Q ss_pred EEecCCcccCcceeeccceEEEEEEeeEEEEeC---------CEEEE--cc---CCcEEEeCCCCceeEEecCCccEEEE
Q 022278 225 MDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG---------DSWYP--VQ---AGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 225 ~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~---------g~~~~--v~---~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
..-.||..=+.|-|+.+..-+.+++|+....+. |+|.. +. ..-.+|+|+|+.|+|.|.++++..++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 334789888887666777889999999988763 23444 43 44689999999999999999888777
Q ss_pred EEeecC
Q 022278 291 LYKDVN 296 (300)
Q Consensus 291 ~~kd~n 296 (300)
|..+--
T Consensus 138 y~~s~~ 143 (174)
T 3ejk_A 138 NCTDIP 143 (174)
T ss_dssp EEESSC
T ss_pred EECCCc
Confidence 765543
No 250
>2l49_A C protein; P2 bacteriophage, P2 C, direct repeats, DNA-binding protein, binding protein; NMR {Enterobacteria phage P2} PDB: 2xcj_A
Probab=95.93 E-value=0.00052 Score=52.01 Aligned_cols=42 Identities=7% Similarity=-0.088 Sum_probs=38.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcc--cCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDL--PGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~--lg~trs~f~~ 69 (300)
|+.+||+++|+|++.||++|+|...|+. |+++ ++++...|+.
T Consensus 19 tq~~lA~~~gis~~~is~~e~g~~~p~~~~l~~ia~~l~~~v~~~~l~~ 67 (99)
T 2l49_A 19 SRQQLADLTGVPYGTLSYYESGRSTPPTDVMMNILQTPQFTKYTLWFMT 67 (99)
T ss_dssp CHHHHHHHHCCCHHHHHHHTTTSSCCCHHHHHHHHSSSSSSSSSSTTTS
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCHHHHHc
Confidence 8899999999999999999999999987 8999 7888887765
No 251
>2p5t_A Putative transcriptional regulator PEZA; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=95.92 E-value=0.0013 Score=54.69 Aligned_cols=43 Identities=12% Similarity=-0.121 Sum_probs=0.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.+|++|+|...|+. |++.+|++...++.
T Consensus 15 ltq~elA~~lgis~~~vs~~e~G~~~~~~~~~~~la~~~~v~~~~l~~ 62 (158)
T 2p5t_A 15 LTQLEFARIVGISRNSLSRYENGTSSVSTELIDIICQKFNVSYVDIVG 62 (158)
T ss_dssp ------------------------------------------------
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCHHHHHHHHHHHCcCHHHHhC
Confidence 48899999999999999999999999987 88888988887775
No 252
>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12}
Probab=95.90 E-value=0.00032 Score=50.88 Aligned_cols=39 Identities=5% Similarity=-0.009 Sum_probs=32.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh----hhcccCCccee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSV 66 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~ 66 (300)
|++++|+++|+|++.+|++|+|...|+. ++.+++.+...
T Consensus 26 tq~elA~~~gvs~~tis~~E~G~~~p~~~~~~l~~~l~~~p~~ 68 (73)
T 3fmy_A 26 TQKEASEIFGGGVNAFSRYEKGNAXPHPSTIKLLRVLDKHPEL 68 (73)
T ss_dssp CHHHHHHHHCSCTTHHHHHHTTSSCCCHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHCCCHHH
Confidence 7899999999999999999999999986 66666655443
No 253
>1b0n_A Protein (SINR protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1 a.35.1.3 PDB: 2yal_A
Probab=95.68 E-value=0.00043 Score=53.43 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=39.0
Q ss_pred CCcccccccCCCCcceeeecCC-CCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNP-TLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~-~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+.+||+++|+|++.+|++|+| ...|+. |+++||++...++.
T Consensus 16 tq~~lA~~~gis~~~i~~~e~g~~~~p~~~~l~~ia~~l~v~~~~l~~ 63 (111)
T 1b0n_A 16 SLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLD 63 (111)
T ss_dssp CHHHHHHHHTCCHHHHHHHHTTCCSCCCHHHHHHHHHHHTCCHHHHHC
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCCHHHHHHHHHHHCcCHHHHhc
Confidence 7899999999999999999999 888987 99999999988875
No 254
>3cec_A Putative antidote protein of plasmid maintenance; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.60A {Nostoc punctiforme}
Probab=95.65 E-value=0.00043 Score=53.28 Aligned_cols=43 Identities=14% Similarity=0.034 Sum_probs=38.6
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...|+.
T Consensus 32 ltq~~lA~~~gis~~~is~~e~g~~~~~~~~l~~l~~~l~v~~~~ll~ 79 (104)
T 3cec_A 32 INTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWLN 79 (104)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCcCCCHHHHHHHHHHHCcCHHHHHh
Confidence 47899999999999999999999999987 88999999877654
No 255
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.63 E-value=0.039 Score=47.99 Aligned_cols=76 Identities=16% Similarity=0.078 Sum_probs=61.0
Q ss_pred EEEEEEecCCcccCcceeeccc-----eEEEEEEe-eEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQ-----HGLLLLEG-QGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~e-----h~~~iL~G-~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
.+....|.||++|+. |..+.. |.-++.-. ...+++||+.+.-++|..+++..-.+|+..|.|++ -+.+++=|
T Consensus 103 ~a~fs~L~pG~~I~p-H~g~~n~~lR~HL~L~~p~~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~-~RvvL~~D 180 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWP-HTGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASS-FRLIFIVD 180 (197)
T ss_dssp EEEEEEECTTEEEEE-ECCSCTTEEEEEEEEECCSSSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSS-CEEEEEEE
T ss_pred eEEEEEeCCCCCcCC-eeCCCCCeEEEEEEEEeCCCCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCC-CEEEEEEe
Confidence 467888999999986 455432 44444444 68899999999999999999999999999999987 67788878
Q ss_pred cCCC
Q 022278 295 VNRN 298 (300)
Q Consensus 295 ~nr~ 298 (300)
+-|-
T Consensus 181 ~~rP 184 (197)
T 3rcq_A 181 VWHP 184 (197)
T ss_dssp EECT
T ss_pred eeCC
Confidence 7663
No 256
>2eby_A Putative HTH-type transcriptional regulator YBAQ; hypothetical protein, JW0472, structural genomics, NPPSFA; 2.25A {Escherichia coli}
Probab=95.46 E-value=0.00057 Score=53.27 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=39.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...++.
T Consensus 25 lsq~~lA~~~gis~~~is~~e~g~~~~~~~~l~~la~~l~~~~~~l~~ 72 (113)
T 2eby_A 25 LKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLN 72 (113)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHHc
Confidence 47899999999999999999999998987 99999999887764
No 257
>2ef8_A C.ECOT38IS, putative transcription factor; helix-turn-helix, DNA binding protein, transcription regulator; HET: CME; 1.95A {Enterobacteria phage P2}
Probab=95.43 E-value=0.00057 Score=49.92 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=36.1
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhccc----CCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLP----GFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~l----g~trs~f~~ 69 (300)
-|+.+||+++|+|++.||++|+|...|+. ++..| +++...++.
T Consensus 24 lsq~~lA~~~gis~~~i~~~e~g~~~~~~~~l~~~~~~l~~~~~v~~~~l~~ 75 (84)
T 2ef8_A 24 LSQSELAIFLGLSQSDISKIESFERRLDALELFELLEVVASRLGLPMDILLK 75 (84)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTSSCCBHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHHccccCCCHHHHHc
Confidence 37899999999999999999999999994 44444 888887764
No 258
>3pxp_A Helix-turn-helix domain protein; DNA-binding, basic helix-loop-helix motif, BHLH motif, lambd repressor-like DNA-binding fold; HET: MSE MYR; 2.30A {Chloroflexus aurantiacus}
Probab=95.43 E-value=0.001 Score=61.48 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=36.5
Q ss_pred cCCcccccccCCCCcceeeecCCCC-Chhh-----hhcccCCccee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTL-SPSH-----LQDLPGFTRSV 66 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~-sps~-----I~~~lg~trs~ 66 (300)
-|+++||+++|+|+++||++|+|.. .||. |+++|+++...
T Consensus 26 LtqeelA~~~gvS~~~is~iE~G~~~~ps~~~l~~lA~aL~v~~~e 71 (292)
T 3pxp_A 26 WTQEVLAERTQLPKRTIERIENGSLAHLDADILLRLADALELTIGE 71 (292)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHTCCSCCCHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHCCCCCCCCHHHHHHHHHhcCCCHHH
Confidence 3889999999999999999999997 8998 99999998765
No 259
>1nr3_A MTH0916, DNA-binding protein TFX; northeast structural genomics consortium, reduced- dimensionality PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.236.1.1
Probab=95.42 E-value=0.001 Score=53.15 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=32.3
Q ss_pred CCcccccccCCCCcceeeecCC------CCChhh-----hhcccCCcce
Q 022278 28 SAPSILDRETSSKPMYWKVTNP------TLSPSH-----LQDLPGFTRS 65 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~------~~sps~-----I~~~lg~trs 65 (300)
||++||+++|+|++.||++|+| ...|+. |+.+++++..
T Consensus 7 TQ~eLA~~~Gvs~~~is~~E~G~~~~~~~~~p~~~~l~~la~~l~v~~~ 55 (122)
T 1nr3_A 7 SQKKIARELKTTRQNVSAIERKAMENIEKSRNTLDFVKSLKSPVRILCR 55 (122)
T ss_dssp SSCSTHHHHHHCCSSSCCHHHHHHTTCSSSSCHHHHHHHHCCCEEEEEC
T ss_pred CHHHHHHHhCCCHHHHHHHHcCCCccchhcccCHHHHHHHHHHHccccc
Confidence 7999999999999999999999 888887 5566665543
No 260
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=95.31 E-value=0.98 Score=39.18 Aligned_cols=163 Identities=14% Similarity=0.080 Sum_probs=94.0
Q ss_pred eEeCCCCeeeccCCCCCcceEEEEecCCCC--CcEEEE--EEEEcCCCcCCCCCCCceEEEEEEECE-EEEEEcCCcEEE
Q 022278 72 ALITPESHVLSPLPEWTNTLGAYLITPAMG--SHFVMY--LANMQENARSALPPHDVERFIFVVQGS-AMLTNASGVSSK 146 (300)
Q Consensus 72 av~~~e~~~~~~~p~~~~~~~~~L~sp~~g--~~f~~~--lv~l~PG~~~~~~~h~gEEf~yVLeG~-v~l~v~gg~~~~ 146 (300)
.+++.+++...+=.+-.|.+-.+. .|... +.|... +.++...+... .-.+.++.+.+|+|. ++|.. +++...
T Consensus 7 ~ii~~~d~~~~pWkNGgG~TrEI~-~P~~~~~~~F~wRiSiA~V~~~g~FS-~FpGidR~i~lL~G~g~~L~~-~~~~~~ 83 (200)
T 1yll_A 7 RILRAVDYPRMPWKNGAGSTEEIA-RDGGDGLDGFGWRLSIADVGESGGFS-GFAGYQRIISVLEGGGMRLRV-DGAESA 83 (200)
T ss_dssp EEECGGGCCEEC-----CEEEEEE-ESSCSGGGSCSEEEEEEEECSCEEEC-CCTTCEEEEEEEESSCEEEEE-TTEECC
T ss_pred EEECHHHCCcccccCCCEeEEEEE-ecCCCCcCCceEEEEEEEeccCCCCC-CCCCccEEEEEEeCCcEEEec-CCCccc
Confidence 356666665532111134444455 65432 344443 55665532221 146889999999998 99998 776544
Q ss_pred e-ccCcEEEeCCCCceEEee-CCeEEEEEEEeeccccCCCCcceeeccCCCCCCcccCCceeEEEEeeCCCCCcceEEEE
Q 022278 147 L-MVDSYTYLPPNFAHSLRA-EGSATLVVFERRYASLENHITEQIVGSTDKQPLLETPGEVFQLRKLLPQAVPFDFNIHI 224 (300)
Q Consensus 147 L-~~Gds~yfpa~~~H~~~N-~~~a~vl~v~~~y~~~~g~~p~~~~~~~~d~~~~~~~g~~~~~~~l~p~~~~~~~~~~~ 224 (300)
| ++.+-+.|+.+.+-.-+. +.+++-+-++ |.+-. +.. .++++--.. .
T Consensus 84 L~~~~~p~~F~G~~~v~a~L~~G~~~DfNlM--~rr~~-~~~--------------------~v~~~~~~~--------~ 132 (200)
T 1yll_A 84 PLRARQAFAFSGDSEVHCTLLDGAIRDFNLI--YAPRR-HRA--------------------RLQWLRVEG--------E 132 (200)
T ss_dssp CBCBTCCEEEETTSCEEEEESSSCEEEEEEE--ECTTT-EEE--------------------EEEEEEEEE--------E
T ss_pred cCCCCCcEEeCCCCcEEEEECCCCEEEEEEE--EcCCc-cEE--------------------EEEEEecCC--------C
Confidence 7 889999998888776665 5666655553 22100 000 111110000 0
Q ss_pred EEecCCcccCcceeeccceEEEEEEeeEEEEeC-CEEEEccCCcEEEeCCCCce
Q 022278 225 MDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLG-DSWYPVQAGDVLWMAPFVPQ 277 (300)
Q Consensus 225 ~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~-g~~~~v~~GD~i~~~~~~~H 277 (300)
..+.+.+ ..-.+|+++|+-.+..+ ++...+.+||.+++....+.
T Consensus 133 ~~~~~~~---------~~~~v~~l~G~~~v~~~~~~~~~L~~~d~l~~~~~~~~ 177 (200)
T 1yll_A 133 LDWHGTA---------STLLLFAQQDGVAISLQGQPRGQLAAHDCLCAEGLQGL 177 (200)
T ss_dssp EEEEECC---------SEEEEEESSSCEEEEETTEEEEEECTTCEEEEESCCSC
T ss_pred eeEcCCC---------CEEEEEEccCcEEEEcCCCceeecCCCCEEEEeCCCcc
Confidence 0011111 11358999999999877 68899999999999876544
No 261
>2jvl_A TRMBF1; coactivator, helix-turn-helix, Pro binding, transcription; NMR {Trichoderma reesei}
Probab=95.31 E-value=0.0015 Score=50.92 Aligned_cols=40 Identities=5% Similarity=0.011 Sum_probs=36.1
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCccee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSV 66 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~ 66 (300)
-|+.+||+++|+|++.||++|+|...|+. |+++||++...
T Consensus 50 lsq~elA~~~gis~~~is~~E~G~~~p~~~~l~~ia~~l~v~~~e 94 (107)
T 2jvl_A 50 MTQAELGKEIGETAATVASYERGTATPDQNILSKMERVLNVKLRG 94 (107)
T ss_dssp CCHHHHHHHHTCCHHHHHHHTTTCSCCCHHHHHHHHHTTTCBSSS
T ss_pred CCHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHhh
Confidence 47899999999999999999999999987 88999988765
No 262
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=95.30 E-value=0.0024 Score=56.76 Aligned_cols=42 Identities=5% Similarity=0.042 Sum_probs=38.5
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-|+++||+++ +|++.+|++|||...|+. |++.||++...|+.
T Consensus 19 ~tq~~la~~~-~s~~~is~~e~g~~~~~~~~l~~l~~~l~~~~~~l~~ 65 (293)
T 2qfc_A 19 LTQKQLSENI-CHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYE 65 (293)
T ss_dssp CCTTTTTTTT-SCHHHHHHHHTSSSCCCHHHHHHHTTTSCCCTHHHHH
T ss_pred CCHHHHHHHH-cCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHHhc
Confidence 3899999999 999999999999999998 99999999887764
No 263
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=95.29 E-value=0.071 Score=40.98 Aligned_cols=61 Identities=11% Similarity=0.116 Sum_probs=47.1
Q ss_pred EEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEeccCcEEEeCCCCceEEeeCCeEEEEE
Q 022278 110 NMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 173 (300)
Q Consensus 110 ~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg--~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~ 173 (300)
.|.||.- .. .-...|..-|++|++++.+ .| +..+.++||++.+|++....++-.+++..++
T Consensus 29 Vm~pGey-tF-~T~~~E~M~vvsG~~~V~l-pg~~ew~~~~aGesF~Vpans~F~l~v~~~~~YlC 91 (94)
T 2oyz_A 29 VMLPGEY-TF-GTQAPERMTVVKGALVVKR-VGEADWTTYSSGESFDVEGNSSFELQVKDATAYLC 91 (94)
T ss_dssp EECSEEE-EE-EESSCEEEEEEESEEEEEE-TTCSSCEEEETTCEEEECSSEEEEEEESSCEEEEE
T ss_pred EEeceEE-EE-cCCCeEEEEEEEeEEEEEc-CCCCcCEEECCCCEEEECCCCEEEEEEcccEeEEE
Confidence 3567632 22 2345788899999999999 44 5799999999999999999999876666554
No 264
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.29 E-value=0.0011 Score=59.09 Aligned_cols=41 Identities=5% Similarity=0.055 Sum_probs=38.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
|+++||+++ +|++.||++|||.+.||. |++.||++...|+.
T Consensus 20 tq~~la~~~-~s~~~~s~~e~g~~~~~~~~l~~i~~~l~~~~~~~~~ 65 (293)
T 3u3w_A 20 TQKQLSENI-CHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYE 65 (293)
T ss_dssp CHHHHHTTT-SCHHHHHHHHTTSCCCCHHHHHHHHHHHTCCTHHHHH
T ss_pred CHHHHHHHh-CCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHHHhC
Confidence 789999999 999999999999999999 99999999998876
No 265
>3bd1_A CRO protein; transcription factor, helix-turn-helix, prophage, structural evolution, transcription; 1.40A {Xylella fastidiosa}
Probab=95.21 E-value=0.00052 Score=50.16 Aligned_cols=42 Identities=5% Similarity=0.019 Sum_probs=37.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh----hhcccC--Ccceeeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPG--FTRSVYKR 69 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg--~trs~f~~ 69 (300)
|+.+||+++|+|++.||++|+|...|.. |+++|| ++...+++
T Consensus 13 sq~~lA~~lgvs~~~is~~e~g~~~p~~~l~~ia~~l~~~v~~~~l~p 60 (79)
T 3bd1_A 13 SVSALAASLGVRQSAISNWRARGRVPAERCIDIERVTNGAVICRELRP 60 (79)
T ss_dssp SHHHHHHHHTCCHHHHHHHHHHTCCCGGGHHHHHHHTTTSSCHHHHCT
T ss_pred CHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCcHHHhCc
Confidence 8999999999999999999999988833 999999 98877754
No 266
>2ict_A Antitoxin HIGA; helix-turn-helix, structural genomics, PSI-2, protein struct initiative, northeast structural genomics consortium, NESG; 1.63A {Escherichia coli} SCOP: a.35.1.3 PDB: 2icp_A
Probab=94.95 E-value=0.001 Score=50.04 Aligned_cols=42 Identities=7% Similarity=-0.005 Sum_probs=37.5
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYK 68 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~ 68 (300)
-|+.+||+++|+|++.+|++|+|...|+. |+++||++...+.
T Consensus 22 ltq~~lA~~~gis~~~is~~e~g~~~~~~~~~~~i~~~l~v~~~~~l 68 (94)
T 2ict_A 22 VSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWL 68 (94)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHTSSCCCHHHHHHHHHHTCSCHHHHH
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCCHHHHHHHHHHHCcCHHHHH
Confidence 37899999999999999999999999977 9999999987454
No 267
>2awi_A PRGX; repressor, pheromone, DNA binding, regulatory domain, transcription; 2.25A {Enterococcus faecalis} SCOP: a.35.1.11 a.118.8.4 PDB: 2axv_A 2axu_A 2aw6_A 2axz_A 2grl_A 2grm_A
Probab=94.91 E-value=0.0015 Score=60.35 Aligned_cols=42 Identities=17% Similarity=0.071 Sum_probs=39.3
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
-||+++|+++ +|++.+|++|||.+.||. |++.+|++...|+.
T Consensus 17 ltq~~la~~~-is~~~is~~E~g~~~~~~~~l~~i~~~l~v~~~~~~~ 63 (317)
T 2awi_A 17 YHQIDLYSGI-MSKSVYIKVEADSRPISVEELSKFSERLGVNFFEILN 63 (317)
T ss_dssp CCHHHHHTTT-SCHHHHHHHHTTCSCCBHHHHHHHHHHHTSCHHHHHH
T ss_pred CCHHHHHHHh-cCHHHHHHHHCCCCCCCHHHHHHHHHHcCCCHHHHHh
Confidence 3789999999 999999999999999998 99999999999886
No 268
>2ppx_A AGR_C_3184P, uncharacterized protein ATU1735; HTH-motif, XRE-family, structural genomics, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: a.35.1.3
Probab=94.77 E-value=0.00061 Score=52.12 Aligned_cols=43 Identities=5% Similarity=-0.079 Sum_probs=36.3
Q ss_pred cCCcccccccCCCCcceeeecCCCCChhh----hhcccCCcceeeee
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSVYKR 69 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~f~~ 69 (300)
-|+++||+++|+|++.||++|+|...|+. |+++|+++...+..
T Consensus 44 lsq~elA~~lgvs~~~is~~E~G~~~p~~~~~~l~~~l~~~~~~l~~ 90 (99)
T 2ppx_A 44 LTQEEFSARYHIPLGTLRDWEQGRSEPDQPARAYLKIIAVDPEGTAA 90 (99)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTSSCCCHHHHHHHHHHHHCHHHHHH
T ss_pred CCHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHCcCHHHHHH
Confidence 47899999999999999999999999984 77777777665543
No 269
>2l1p_A DNA-binding protein SATB1; PSI-biology, NESG, structural genomics, protein structure in northeast structural genomics consortium; NMR {Homo sapiens} PDB: 3nzl_A*
Probab=94.75 E-value=0.0013 Score=49.40 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=26.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH 55 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~ 55 (300)
+|.+||+++|+|.+.||.+|||...|+.
T Consensus 34 kQ~eLAK~iGIsqsTLSaIenG~~~PsL 61 (83)
T 2l1p_A 34 NQSSLAKECPLSQSMISSIVNSTYYANV 61 (83)
T ss_dssp CHHHHHHHSSSCHHHHHHHHTCSSCCCC
T ss_pred CHHHHHHHcCCCHHHHHHHHcCCCCCCc
Confidence 5789999999999999999999999994
No 270
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=94.57 E-value=0.19 Score=42.79 Aligned_cols=74 Identities=14% Similarity=0.039 Sum_probs=52.7
Q ss_pred EEEcCCCcCCCC-CCCceEEEEEEECEEEEEEcCCc----------EEEec---cCcEEEeCCCCceEEee-CC-eEEE-
Q 022278 109 ANMQENARSALP-PHDVERFIFVVQGSAMLTNASGV----------SSKLM---VDSYTYLPPNFAHSLRA-EG-SATL- 171 (300)
Q Consensus 109 v~l~PG~~~~~~-~h~gEEf~yVLeG~v~l~v~gg~----------~~~L~---~Gds~yfpa~~~H~~~N-~~-~a~v- 171 (300)
....+|---+.| +....++++|++|++...+.|.+ .+.|. ..-.+|+|+|..|.+.| .. .|.+
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 344666555666 44578999999999988773432 56787 56789999999999998 43 5655
Q ss_pred EEEEeeccccC
Q 022278 172 VVFERRYASLE 182 (300)
Q Consensus 172 l~v~~~y~~~~ 182 (300)
.+....|.|.+
T Consensus 138 y~~s~~Y~p~~ 148 (174)
T 3ejk_A 138 NCTDIPHRQGE 148 (174)
T ss_dssp EEESSCCCTTS
T ss_pred EECCCccCCCC
Confidence 45566676644
No 271
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=94.54 E-value=0.32 Score=43.35 Aligned_cols=81 Identities=10% Similarity=0.034 Sum_probs=59.7
Q ss_pred cceEEEEEEecCCcccCcceeeccceEEEEEEe-------------------eEEEEeCCEEEEc--------cCCcEEE
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEG-------------------QGIYRLGDSWYPV--------QAGDVLW 270 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G-------------------~G~~~~~g~~~~v--------~~GD~i~ 270 (300)
+.++--++.+.||...|.|-|..-+|.+...-| -..+..||.++.+ +||.-|-
T Consensus 104 k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 104 KCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC 183 (246)
T ss_dssp CCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE
T ss_pred CcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe
Confidence 478888999999999999666667777777766 4456677777766 4555588
Q ss_pred eCCCCceeEEecCC-ccEEEEEEeecCCC
Q 022278 271 MAPFVPQWYAALGK-TRTRYLLYKDVNRN 298 (300)
Q Consensus 271 ~~~~~~H~~~n~G~-e~~~fi~~kd~nr~ 298 (300)
++||.-|||.+.+. .+...-=.--||.|
T Consensus 184 l~Pg~~H~F~ae~g~G~vligEVSt~NDD 212 (246)
T 3kmh_A 184 LPPGLYHSFWAEAGFGDVLVGEVSSVNDD 212 (246)
T ss_dssp ECTTEEEEEEECTTSCCEEEEEEEECCCT
T ss_pred cCCCCEEEEEecCCCccEEEEEcccCcCC
Confidence 88899999999876 35555445555554
No 272
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=94.37 E-value=0.23 Score=39.18 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=48.5
Q ss_pred EEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEeccCcEEEeCCCCceEEeeCCeEEEEE
Q 022278 109 ANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 173 (300)
Q Consensus 109 v~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg--~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~ 173 (300)
-.|.||...-...-...|..-|++|++++.+ .| +..+..+|+++.+|++....++-.+++..++
T Consensus 42 GVm~PGe~~YtF~T~~~E~MevvsG~l~V~L-pg~~eW~~~~aGesF~VpanssF~lkv~~~~~Y~C 107 (111)
T 3hqx_A 42 GVILPTEQPLTFETHVPERMEIISGECRVKI-ADSTESELFRAGQSFYVPGNSLFKIETDEVLDYVC 107 (111)
T ss_dssp EEECCCSSCEEEECSSCEEEEEEESEEEEEE-TTCSSCEEEETTCEEEECTTCEEEEECSSCEEEEE
T ss_pred EEEeccccceEEcCCCcEEEEEEEeEEEEEc-CCcccCEEeCCCCEEEECCCCcEEEEECcceeEEE
Confidence 3457874111113445788899999999999 44 5689999999999999999999777666665
No 273
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=94.21 E-value=0.59 Score=40.41 Aligned_cols=100 Identities=18% Similarity=0.147 Sum_probs=69.2
Q ss_pred eEeCCCCeeeccCCCCCcceEEEEecCCCC-CcEEEE--EEEEcCCCcCCCC-CCCceEEEEEEECE-EEEEEcCC-cEE
Q 022278 72 ALITPESHVLSPLPEWTNTLGAYLITPAMG-SHFVMY--LANMQENARSALP-PHDVERFIFVVQGS-AMLTNASG-VSS 145 (300)
Q Consensus 72 av~~~e~~~~~~~p~~~~~~~~~L~sp~~g-~~f~~~--lv~l~PG~~~~~~-~h~gEEf~yVLeG~-v~l~v~gg-~~~ 145 (300)
.+++.+++...+=.+-.|.+-.+.+.|..+ +.|... +.++... .+.. -.+.++.+.+|+|+ ++|.. +| ...
T Consensus 12 ~~i~~~d~~~~pWkNGgG~TrEI~~~P~~~~~~F~wRiSiA~V~~~--g~FS~FpG~dR~l~lL~G~gl~L~~-~g~~~~ 88 (193)
T 3esg_A 12 SVWRAVDYVRMPWKNGGGSTEEITRDAGTGLEGFGWRLSIADIGES--GGFSSFAGYQRVITVIQGAGMVLTV-DGEEQR 88 (193)
T ss_dssp EEECGGGCEEEECTTSSEEEEEEEECCCBTTTBCSEEEEEEEECSS--EECCCCTTCEEEEEEEESSCEEEEE-TTSCCE
T ss_pred EEecHHHCCcccccCCCeEEEEEEEcCCCcCCCceEEEEEEEEcCC--CCCCCCCCceEEEEEEcCCcEEEEe-CCCccE
Confidence 468888877653222235566666776543 445444 5566542 2222 46889999999997 99998 66 568
Q ss_pred EeccCcEEEeCCCCceEEee-CCeEEEEEE
Q 022278 146 KLMVDSYTYLPPNFAHSLRA-EGSATLVVF 174 (300)
Q Consensus 146 ~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v 174 (300)
.|++.+.+.|+.+.+-.-+. +.+++-+-+
T Consensus 89 ~L~~~~p~~F~G~~~v~a~L~~G~v~DfNl 118 (193)
T 3esg_A 89 GLLPLQPFAFRGDSQVSCRLITGPIRDFNL 118 (193)
T ss_dssp EECBTCCEEEETTSCEEEEESSSCEEEEEE
T ss_pred ecCCCCCEEeCCCCeEEEEECCCCEEEEEE
Confidence 89999999999998887776 677766655
No 274
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.03 E-value=0.28 Score=44.57 Aligned_cols=82 Identities=12% Similarity=0.225 Sum_probs=62.5
Q ss_pred EEEeeCCCCCc-ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEc--cC--------CcEEEeCCCCc
Q 022278 208 LRKLLPQAVPF-DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPV--QA--------GDVLWMAPFVP 276 (300)
Q Consensus 208 ~~~l~p~~~~~-~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v--~~--------GD~i~~~~~~~ 276 (300)
+..+.|+..++ -+.++++.|++|.+... .....|=++..|.|++.+..+|+.++. +. .|.+|++.|..
T Consensus 16 ~~~itp~~a~~~y~~f~~~~L~~Ge~~~~-~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~ 94 (270)
T 2qjv_A 16 IQHISPQNAGWEYVGFDVWQLXAGESITL-PSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTE 94 (270)
T ss_dssp EEEECHHHHTSSSCEEEEEEECTTCEEEE-CCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCC
T ss_pred EEEeCCCCCCcEEeEEEEEEecCCCEEEe-cCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCE
Confidence 44455665455 47899999999998765 455667778999999999999998876 22 59999999997
Q ss_pred eeEEecCCccEEEEEE
Q 022278 277 QWYAALGKTRTRYLLY 292 (300)
Q Consensus 277 H~~~n~G~e~~~fi~~ 292 (300)
=.+.+.. +++|.+.
T Consensus 95 v~i~a~~--~~~~~v~ 108 (270)
T 2qjv_A 95 AXVTAET--DLELAVC 108 (270)
T ss_dssp EEEEESS--SEEEEEE
T ss_pred EEEEecC--CceEEEE
Confidence 7777765 4665543
No 275
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=94.02 E-value=0.48 Score=40.18 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=53.7
Q ss_pred CcceEEEEEEecCCcccCcceeeccceEEEEEEeeE-EEEe---CCEEEE------ccCCcE--EEeCCCCceeEEec-C
Q 022278 217 PFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQG-IYRL---GDSWYP------VQAGDV--LWMAPFVPQWYAAL-G 283 (300)
Q Consensus 217 ~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G-~~~~---~g~~~~------v~~GD~--i~~~~~~~H~~~n~-G 283 (300)
+.....-.+.|.+|..... |...-.|+.|...|.+ .+.+ ||+... +.+|+. +++|+|+.|+.+++ |
T Consensus 46 R~~~T~IYfLL~~g~~S~~-HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g 124 (170)
T 1yud_A 46 RQLWSSIYFLLRTGEVSHF-HRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQD 124 (170)
T ss_dssp SBSCEEEEEEEETTCCEEE-EECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSS
T ss_pred CccceEEEEEECCCCCCee-EEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCC
Confidence 4445566788999998766 5556668999999998 6666 787777 889999 99999999999998 5
No 276
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=93.97 E-value=0.059 Score=49.60 Aligned_cols=70 Identities=6% Similarity=-0.015 Sum_probs=54.9
Q ss_pred eEEEEEEecCCcccCcceeeccc-----------eEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEE
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYNQ-----------HGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTR 288 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~e-----------h~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 288 (300)
..+|. .+.||+.|.. |..+.+ |+=.+..-...+.+||+.+..++|.+.|+....+|+..|.|+++=.
T Consensus 92 ~~vRl-rL~PG~~I~~-HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~GE~w~~d~~~~H~v~N~g~~~RI 169 (290)
T 1e5r_A 92 QMARS-RNLKNAIVIP-HRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRPGEIWFLDAATVHSAVNFSEISRQ 169 (290)
T ss_dssp EEEEE-EEEESEEEEE-ECCC--------CBCCEEEECSCCTTEEEEETTEEECCCTTEEEECCTTSCEEEEESSSSCCC
T ss_pred heEEE-EeCCCCEeeC-ccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCCCCEEEEcCCCeeEEEcCCCCCeE
Confidence 45666 9999999986 454423 3444567778888999999999999999999999999999996644
Q ss_pred EEE
Q 022278 289 YLL 291 (300)
Q Consensus 289 fi~ 291 (300)
.|+
T Consensus 170 hLv 172 (290)
T 1e5r_A 170 SLC 172 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 277
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.71 E-value=0.15 Score=43.67 Aligned_cols=25 Identities=16% Similarity=0.208 Sum_probs=22.9
Q ss_pred EEEccCCcEEEeCCCCceeEEecCC
Q 022278 260 WYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 260 ~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
...++|||++|+|+|-.|+..|.++
T Consensus 202 ~~~l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 202 SCILSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSS
T ss_pred EEEECCCCEEEeCCCCcEEEEECCC
Confidence 5679999999999999999999975
No 278
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=93.62 E-value=0.19 Score=39.39 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=47.2
Q ss_pred EEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEeccCcEEEeCCCCceEEeeCCeEEEEE
Q 022278 110 NMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPPNFAHSLRAEGSATLVV 173 (300)
Q Consensus 110 ~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg--~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~ 173 (300)
.|.||. ... .-...|..-|++|++++.+ .| +..+..+|+++.+|++....++-.+++..++
T Consensus 42 Vm~PGe-Y~F-~T~~~E~MevvsG~l~V~L-pG~~eW~~~~aGesF~VpanssF~lkv~~~t~Y~C 104 (106)
T 3eo6_A 42 LLHPGV-YTL-SSEVAETIRVLSGMAYYHA-EGANDVQELHAGDSMVIPANQSYRLEVMEPLDYLL 104 (106)
T ss_dssp EECSEE-EEE-CCSSCEEEEEEEEEEEEEC-TTCSSCEEEETTCEEEECSSSCEEEEEEEEEEEEE
T ss_pred EEeeeE-EEe-cCCCcEEEEEEEeEEEEEC-CCCccCEEECCCCEEEECCCCcEEEEECceEEEEE
Confidence 456773 222 2345788899999999999 54 5799999999999999999999766666555
No 279
>3bdn_A Lambda repressor; repressor, allostery; HET: DNA; 3.91A {Enterobacteria phage lambda}
Probab=93.57 E-value=0.0081 Score=52.43 Aligned_cols=46 Identities=13% Similarity=0.087 Sum_probs=40.7
Q ss_pred CCCccCCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeeee
Q 022278 23 DGGFCSAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYKR 69 (300)
Q Consensus 23 ~~~~~~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~~ 69 (300)
.-|+ |+.+||+++|+|++.+|++|+|...|+. |+++||++...+..
T Consensus 28 ~~g~-t~~~lA~~~gis~~~i~~~~~g~~~p~~~~l~~ia~~l~v~~~~l~~ 78 (236)
T 3bdn_A 28 ELGL-SQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSP 78 (236)
T ss_dssp TTTC-CSHHHHHHHTSCHHHHHHHTTTTSCCCHHHHHHTTTTTTSCGGGTCH
T ss_pred HcCC-CHHHHHHHHCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCcCHHHhhc
Confidence 3455 9999999999999999999999999976 89999999888764
No 280
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=93.56 E-value=0.27 Score=42.68 Aligned_cols=75 Identities=8% Similarity=0.042 Sum_probs=57.7
Q ss_pred EEEEEEEcCCCcCCCCC---CCceEEEEEE--EC-EEEEEEcCCcEEEeccCcEEEeCCCCceEEee-CCeEEEEEEEee
Q 022278 105 VMYLANMQENARSALPP---HDVERFIFVV--QG-SAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSATLVVFERR 177 (300)
Q Consensus 105 ~~~lv~l~PG~~~~~~~---h~gEEf~yVL--eG-~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl~v~~~ 177 (300)
......|.||+...+|. ...=.+-+.| -. .+.+.+ ||+++..++|++++|.-...|...| ....|++.+...
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V-~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~ 181 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC-ANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDV 181 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE-TTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE-CCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEee
Confidence 56778899998776652 2333333333 33 688999 9999999999999999999999999 556888888777
Q ss_pred ccc
Q 022278 178 YAS 180 (300)
Q Consensus 178 y~~ 180 (300)
..|
T Consensus 182 ~rP 184 (197)
T 3rcq_A 182 WHP 184 (197)
T ss_dssp ECT
T ss_pred eCC
Confidence 766
No 281
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=93.45 E-value=0.23 Score=48.18 Aligned_cols=64 Identities=13% Similarity=0.253 Sum_probs=48.9
Q ss_pred CcEEEEEEEEc--CCCcCCCCCCCceEEEEEEECEEEEEEcCCc-E--EEeccCcEEEeCCCCceEEeeC
Q 022278 102 SHFVMYLANMQ--ENARSALPPHDVERFIFVVQGSAMLTNASGV-S--SKLMVDSYTYLPPNFAHSLRAE 166 (300)
Q Consensus 102 ~~f~~~lv~l~--PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~-~--~~L~~Gds~yfpa~~~H~~~N~ 166 (300)
..|....+++. +++........+-..+.|++|++++.. ++. + ..|++||++++|++..-.++++
T Consensus 355 ~eF~v~~~~~~~~~~~~~~~~~~~~~~illv~~G~g~i~~-~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 355 AEFSVLQTIFDKSKGGKQVIEGLNGPSIVIATNGKGTIQI-TGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp SSCEEEEEECCTTTCCEEEECCCSSCEEEEEEESEEEEEE-TTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CeEEEEEEEecCCCCceeEEecCCCcEEEEEEeCeEEEEe-CCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 47888888887 332222224567889999999999998 654 4 7999999999999977777763
No 282
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=93.42 E-value=0.35 Score=41.13 Aligned_cols=151 Identities=12% Similarity=0.011 Sum_probs=86.8
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCc-EEEeccCcEEE-----eCCCCceEEeeCCeEEEEEEEeec-cc
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV-SSKLMVDSYTY-----LPPNFAHSLRAEGSATLVVFERRY-AS 180 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~-~~~L~~Gds~y-----fpa~~~H~~~N~~~a~vl~v~~~y-~~ 180 (300)
..++++|..--.....++.+++|++|.+.+.. +++ ...+.+||++= .......++...++++++.+.+.- ..
T Consensus 32 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~-~~~~~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~ 110 (246)
T 3of1_A 32 EKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV-NDNKVNSSGPGSSFGELALMYNSPRAATVVATSDCLLWALDRLTFRK 110 (246)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEECCEEEES-TTSCCEEECTTCEECHHHHHHTCCCSSEEEESSCEEEEEEEHHHHHH
T ss_pred eEEECCCCEEEecCCCCCEEEEEEeeEEEEEE-CCEEEEecCCCCeeehhHHhcCCCCCcEEEECCCeEEEEEEhHHHHH
Confidence 45566665443334567899999999999997 554 57899999874 122233455556778887774322 21
Q ss_pred cCCCCcceeecc----CCCCCCcccCCceeEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEE
Q 022278 181 LENHITEQIVGS----TDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR 255 (300)
Q Consensus 181 ~~g~~p~~~~~~----~~d~~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~ 255 (300)
+-...|...... ...++. +.. +.+.... -...+....+++|..+= .+-....+.|+|++|+..+.
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~~~--f~~-------l~~~~l~~l~~~~~~~~~~~g~~i~-~~g~~~~~~y~I~~G~v~v~ 180 (246)
T 3of1_A 111 ILLGSSFKKRLMYDDLLKSMPV--LKS-------LTTYDRAKLADALDTKIYQPGETII-REGDQGENFYLIEYGAVDVS 180 (246)
T ss_dssp TTTTTTSHHHHHSHHHHHHCGG--GTT-------CCHHHHHHHHHTCEEEEECTTCEEE-CTTSBCCEEEEEEECEEEEE
T ss_pred HHHHhHHHHHHHHHHHHhhChh--hhc-------CCHHHHHHHHHhhheEEeCCCCEEE-eCCCcCCEEEEEEecEEEEE
Confidence 111111100000 000000 000 0011111 12334567788888873 24444557899999999988
Q ss_pred eCC--EEEEccCCcEE
Q 022278 256 LGD--SWYPVQAGDVL 269 (300)
Q Consensus 256 ~~g--~~~~v~~GD~i 269 (300)
..+ ....+.+||++
T Consensus 181 ~~~~~~~~~l~~g~~f 196 (246)
T 3of1_A 181 KKGQGVINKLKDHDYF 196 (246)
T ss_dssp ETTTEEEEEEETTCEE
T ss_pred EcCCceEEEcCCCCcc
Confidence 776 46788999975
No 283
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=92.96 E-value=0.004 Score=49.93 Aligned_cols=39 Identities=5% Similarity=-0.012 Sum_probs=32.7
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh----hhcccCCccee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSV 66 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~ 66 (300)
||+++|++.|+|++.+|+.|+|...|+. ++.+++.+...
T Consensus 86 sq~~la~~~g~s~~~i~~~E~g~~~p~~~~~~l~~~~~~~p~~ 128 (133)
T 3o9x_A 86 TQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPEL 128 (133)
T ss_dssp CHHHHHHHHCSCTTHHHHHHHTSSCCCHHHHHHHHHHHHCGGG
T ss_pred CHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHccCHHH
Confidence 7899999999999999999999999986 66666655443
No 284
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=92.64 E-value=0.068 Score=49.16 Aligned_cols=74 Identities=12% Similarity=-0.040 Sum_probs=52.1
Q ss_pred cEEEEEEEEcCCCcCCCCCCC---c------e--EEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEee-CCeEE
Q 022278 103 HFVMYLANMQENARSALPPHD---V------E--RFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRA-EGSAT 170 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~---g------E--Ef~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N-~~~a~ 170 (300)
.+....+.|.||+.-.+|... + - +.-.+..=.+.+.+ +|+.+.+.+|+..||..+.+|...| ....|
T Consensus 90 ~l~~vRlrL~PG~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~v-dg~~~~m~~GE~w~~d~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 90 HLQMARSRNLKNAIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSN-EDTVIHMRPGEIWFLDAATVHSAVNFSEISR 168 (290)
T ss_dssp SEEEEEEEEEESEEEEEECCC--------CBCCEEEECSCCTTEEEEE-TTEEECCCTTEEEECCTTSCEEEEESSSSCC
T ss_pred hhheEEEEeCCCCEeeCccCccccccccCCceEEEeeEecCCCcEEEE-CCEEEecCCCCEEEEcCCCeeEEEcCCCCCe
Confidence 345565589999877665222 1 1 12233344566777 9999999999999999999999999 55678
Q ss_pred EEEEEee
Q 022278 171 LVVFERR 177 (300)
Q Consensus 171 vl~v~~~ 177 (300)
+..|.--
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 7776544
No 285
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=92.11 E-value=1.1 Score=40.59 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=55.1
Q ss_pred EEEee-CCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCce-eEEecCCc
Q 022278 208 LRKLL-PQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQ-WYAALGKT 285 (300)
Q Consensus 208 ~~~l~-p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H-~~~n~G~e 285 (300)
.|.|. +++.+... ++.|.||-..|. --|...-++|||+|+.. +|| ..+.+|++.|+|.|+.= ..+-.|++
T Consensus 81 ~RlLs~~d~GaSTl---~V~fpp~~~~P~-Gi~~ad~E~fVL~G~i~--~G~--~~l~~h~Y~f~PaGV~~~~~kv~~~~ 152 (303)
T 2qdr_A 81 RRLLTWHDSGASTS---RVVLPPKFEAPS-GIFTADLEIFVIKGAIQ--LGE--WQLNKHSYSFIPAGVRIGSWKVLGGE 152 (303)
T ss_dssp EEEEEECTTSCEEE---EEEECTTCEECC-BEESSCEEEEEEESEEE--ETT--EEECTTEEEEECTTCCBCCEEEETTS
T ss_pred eeecccCCCCcceE---EEEecCCCCCCC-cccccceEEEEEEeEEE--eCC--EEecCCceEEecCCCccCceeecCCC
Confidence 34443 44444443 567899999986 56665555999998755 455 46789999999999976 55566888
Q ss_pred cEEEEEE
Q 022278 286 RTRYLLY 292 (300)
Q Consensus 286 ~~~fi~~ 292 (300)
+.+-|.|
T Consensus 153 g~~iL~f 159 (303)
T 2qdr_A 153 EAEILWM 159 (303)
T ss_dssp CEEEEEE
T ss_pred CcEEEEE
Confidence 8877777
No 286
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.01 E-value=0.36 Score=44.74 Aligned_cols=60 Identities=17% Similarity=0.266 Sum_probs=46.3
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCC-ceEEe
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF-AHSLR 164 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~-~H~~~ 164 (300)
..|....+++.++... ...++-..+.|++|+.++.. +++++.|++||++++|++. .-.++
T Consensus 249 ~~F~~~~~~~~~~~~~--~~~~~~~il~v~~G~~~l~~-~~~~~~l~~G~~~~vpa~~~~~~i~ 309 (319)
T 1qwr_A 249 EYFSVYKWDINGEAEM--AQDESFLICSVIEGSGLLKY-EDKTCPLKKGDHFILPAQMPDFTIK 309 (319)
T ss_dssp SSCEEEEEEEEEEEEE--CCCSSCEEEEEEEEEEEEEE-TTEEEEEETTCEEEECTTCCCEEEE
T ss_pred CEEEEEEEEECCceEE--ccCCccEEEEEEcCeEEEEE-CCEEEEEcCCcEEEEeCCCceEEEE
Confidence 4677777777644221 23466788999999999998 8889999999999999987 44554
No 287
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=91.98 E-value=0.52 Score=36.09 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=49.8
Q ss_pred ecCCcccCcceeeccceEEEEEEeeEEEEeCCE--EEEccCCcEEEeCCCCceeEEecCCccEEEEEE
Q 022278 227 FQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS--WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLY 292 (300)
Q Consensus 227 l~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~--~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~ 292 (300)
+.||.+. =.-...|.+-|++|+..+.+.|+ |...++||...+|++..=.++.. ++..|+|.
T Consensus 30 m~pGeyt---F~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 30 MLPGEYT---FGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp ECSEEEE---EEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EeceEEE---EcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 3577642 22345578999999999999985 99999999999999988888874 88999985
No 288
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=91.73 E-value=0.23 Score=36.68 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=32.0
Q ss_pred cceEEEEEEecCCcccCcceeeccc-eEEEEEEeeEEEEe
Q 022278 218 FDFNIHIMDFQPGDFLNVKEVHYNQ-HGLLLLEGQGIYRL 256 (300)
Q Consensus 218 ~~~~~~~~tl~PG~~~p~~~~H~~e-h~~~iL~G~G~~~~ 256 (300)
-++.+.+..|.||+-.+. |.|... ++.||++|++.+-+
T Consensus 34 lgls~~r~~l~~gg~~~P-H~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 34 LDILLNCLQMNEGALFVP-HYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp TTEEEEEEEECTTCEEEE-EEESSCEEEEEEEESCEEEEE
T ss_pred CCcceEEEEEcCCcCcCC-ccCCCCcEEEEEEeceEEEEE
Confidence 478999999999999986 777765 77899999997754
No 289
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=91.68 E-value=0.59 Score=37.74 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=43.8
Q ss_pred CCcccCcc---eee--ccceEEEEEEeeEEEE-eCC-------EEEEccCCcEEEeCCCCceeEEecCCccEEE
Q 022278 229 PGDFLNVK---EVH--YNQHGLLLLEGQGIYR-LGD-------SWYPVQAGDVLWMAPFVPQWYAALGKTRTRY 289 (300)
Q Consensus 229 PG~~~p~~---~~H--~~eh~~~iL~G~G~~~-~~g-------~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~f 289 (300)
|++....| -+| .| .-+-||+|+..|+ +++ +..-..+|++.+++|...|-++...+ +++|
T Consensus 23 P~~ll~~H~~~~Tk~Gtw-g~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVY-PRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEE-EEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred hHHHHhhccccCCCCCEE-EEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 66666654 233 34 4789999999888 333 55678999999999999999998655 4444
No 290
>2fjr_A Repressor protein CI; genetic switch, regulation, cooperativity, transcription regulator; 1.95A {Enterobacteria phage 186} PDB: 2fkd_A
Probab=91.67 E-value=0.0091 Score=50.36 Aligned_cols=41 Identities=2% Similarity=-0.208 Sum_probs=36.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh----hhcccCCcceeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRSVYK 68 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs~f~ 68 (300)
|+.+||+++|+|++.+|+.|++...|.. |++++|++...+.
T Consensus 22 tq~elA~~~Gis~~~i~~~e~g~~~p~~~l~~ia~~~~v~~~~l~ 66 (189)
T 2fjr_A 22 QKIQLANHFDIASSSLSNRYTRGAISYDFAAHCALETGANLQWLL 66 (189)
T ss_dssp SHHHHHHHTTCCHHHHHHHHHSSSCCHHHHHHHHHHHCCCHHHHH
T ss_pred CHHHHHHHhCcCHHHHHHHHhCCCCCHHHHHHHHHHHCCCHHHHh
Confidence 9999999999999999999999999832 8899999887765
No 291
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=91.52 E-value=0.36 Score=46.08 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=47.0
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCC-ceEEee
Q 022278 102 SHFVMYLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNF-AHSLRA 165 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~-~H~~~N 165 (300)
..|....+++.++. .. ...++-..+.|++|++++.. ++++..|++||++++|++. .-.++.
T Consensus 322 ~~F~v~~~~l~~~~-~~-~~~~~~~il~v~~G~~~l~~-~~~~~~l~~G~~~fvpa~~~~~~i~g 383 (394)
T 2wfp_A 322 DDFAFSLHDLALQE-TS-IGQHSAAILFCVEGEAVLRK-DEQRLVLKPGESAFIGADESPVNASG 383 (394)
T ss_dssp SSCEEEEEECCSSC-EE-ECCSSCEEEEEEEEEEEEEE-TTEEEEECTTCEEEECGGGCCEEEEE
T ss_pred CEEEEEEEEEcCCe-EE-ecCCCcEEEEEEeceEEEEE-CCeEEEEccCcEEEEeCCCceEEEEe
Confidence 46777788876542 11 24566789999999999998 8888999999999999984 555553
No 292
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=91.39 E-value=1.4 Score=42.96 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=48.7
Q ss_pred CCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEee
Q 022278 121 PHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 121 ~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~ 177 (300)
..+||+.+|+-+|++.++- .=-...+++||++.+|.|+.+++.=.+++|.++++.-
T Consensus 175 NaDGD~Livpq~G~l~i~T-EfG~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~ 230 (471)
T 1eyb_A 175 NSDGDFLIVPQKGNLLIYT-EFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVY 230 (471)
T ss_dssp ESSEEEEEEEEESCEEEEE-TTEEEEECTTEEEEECTTCCEEEECSSSEEEEEEEEE
T ss_pred cCCCCEEEEEEeCCEEEEE-ecccEEeccCCEEEECCccEEEEeeCCCceEEEEEcc
Confidence 5899999999999999997 6556789999999999999999985338998888653
No 293
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=91.35 E-value=0.35 Score=36.98 Aligned_cols=35 Identities=11% Similarity=0.039 Sum_probs=30.2
Q ss_pred EEEccCCcEEEeCCCCceeEEecCCccEEEEEEeecC
Q 022278 260 WYPVQAGDVLWMAPFVPQWYAALGKTRTRYLLYKDVN 296 (300)
Q Consensus 260 ~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd~n 296 (300)
.-.|++||++++|.|-+=...|.. .|+|++||=-.
T Consensus 7 ~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna 41 (93)
T 1dgw_Y 7 AATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNA 41 (93)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred hceecCCcEEEECCCCceeEEecC--CeEEEEEEecC
Confidence 457999999999999999999985 49999997444
No 294
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=91.21 E-value=1.3 Score=37.96 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=46.2
Q ss_pred cCCcccCccee--eccceEEEEEEeeEE---EEeC------CEEEEcc----CCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 228 QPGDFLNVKEV--HYNQHGLLLLEGQGI---YRLG------DSWYPVQ----AGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 228 ~PG~~~p~~~~--H~~eh~~~iL~G~G~---~~~~------g~~~~v~----~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
.+|.-=+.|-| |.+..-+.+++|+.. +.+. |+|..+. .+-.+|+|+|+.|+|.+.+++ ..++|
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNY 133 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 37887777666 677788999999963 3232 2576663 367899999999999999886 44443
No 295
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=90.93 E-value=0.88 Score=41.73 Aligned_cols=59 Identities=8% Similarity=0.224 Sum_probs=45.1
Q ss_pred CcEEEEEEEEcCCCcCCCCCCCce-EEEEEEECEEEEEEcCCcEEEeccCcEEEeCCCCc-eEEee
Q 022278 102 SHFVMYLANMQENARSALPPHDVE-RFIFVVQGSAMLTNASGVSSKLMVDSYTYLPPNFA-HSLRA 165 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h~gE-Ef~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa~~~-H~~~N 165 (300)
..|....+++.+... ... ++- ..+.|++| +++.. ++++..|++||++++|++.. -.++.
T Consensus 228 ~~F~v~~~~~~~~~~--~~~-~~~~~il~v~~G-~~i~~-~~~~~~l~~G~~~~ipa~~~~~~i~g 288 (300)
T 1zx5_A 228 ENFGLEVVDVTGTAE--IKT-GGVMNILYAAEG-YFILR-GKETADLHRGYSCLVPASTDSFTVES 288 (300)
T ss_dssp SSEEEEEEEEEEEEE--EEC-CSBCEEEEEEES-CEEEE-SSSEEEECTTCEEEECTTCCEEEEEE
T ss_pred CeEEEEEEEECCceE--Eec-CCceEEEEEccc-EEEEe-CCeEEEEccceEEEEeCCCceEEEEe
Confidence 468888888764221 123 666 78999999 99998 88899999999999999984 55543
No 296
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=90.55 E-value=0.8 Score=35.78 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=58.5
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--EEEEccCCcEEEeCCCCceeEEe
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAA 281 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n 281 (300)
|++..+-+.-.+... -. +=.+.||.+. =.-...|.+-|++|...+.+.| +|...++|+...+|++..=.++.
T Consensus 23 GkV~S~~~~~~dG~~-kT--lGVm~PGeY~---F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 23 GRRSERSVILADGSM-HS--LTLLHPGVYT---LSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp TTEEEEEEEETTSCE-EE--EEEECSEEEE---ECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred CeEEEEEEEeCCCCe-EE--EEEEeeeEEE---ecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEE
Confidence 455666555333221 11 2233577642 2224457899999999999999 79999999999999999988888
Q ss_pred cCCccEEEEEE
Q 022278 282 LGKTRTRYLLY 292 (300)
Q Consensus 282 ~G~e~~~fi~~ 292 (300)
. ++..|+|.
T Consensus 97 ~--~~t~Y~Cs 105 (106)
T 3eo6_A 97 M--EPLDYLLS 105 (106)
T ss_dssp E--EEEEEEEE
T ss_pred C--ceEEEEEc
Confidence 5 89999996
No 297
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=90.03 E-value=1.7 Score=37.11 Aligned_cols=62 Identities=11% Similarity=0.212 Sum_probs=45.1
Q ss_pred CCcccCccee--eccceEEEEEEeeEE-EEeC--------CEEEEcc--C--CcEEEeCCCCceeEEecCCccEEEEE
Q 022278 229 PGDFLNVKEV--HYNQHGLLLLEGQGI-YRLG--------DSWYPVQ--A--GDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 229 PG~~~p~~~~--H~~eh~~~iL~G~G~-~~~~--------g~~~~v~--~--GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
+|.-=+.|-| +.+..-+.+++|+.. +.+| |+|..+. + +-.+|+|+|+-|+|.+.+++ ..++|
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 134 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLY 134 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEE
Confidence 7887777656 567778899999862 3222 2576663 2 57899999999999999886 44443
No 298
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=89.97 E-value=0.28 Score=36.27 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=32.8
Q ss_pred CcEEEEEEEEcCCCcCCCCC-CCceEEEEEEECEEEEEE
Q 022278 102 SHFVMYLANMQENARSALPP-HDVERFIFVVQGSAMLTN 139 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~-h~gEEf~yVLeG~v~l~v 139 (300)
-.+.+..+.+.||+...+|. ...-|++||++|++.+.+
T Consensus 34 lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~ 72 (79)
T 1dgw_X 34 LDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVEL 72 (79)
T ss_dssp TTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEE
T ss_pred CCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEE
Confidence 46888999999999888884 457899999999999887
No 299
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=89.74 E-value=0.036 Score=46.46 Aligned_cols=41 Identities=7% Similarity=-0.086 Sum_probs=37.2
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh-----hhcccCCcceeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH-----LQDLPGFTRSVYK 68 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~-----I~~~lg~trs~f~ 68 (300)
|.++||+++|+|+-|+.++++|+.+||. |.++||++.....
T Consensus 28 Twe~IAe~iG~S~v~vtaa~lGQ~~ls~e~A~kLa~~LgL~~e~~~ 73 (156)
T 1dw9_A 28 SFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSIL 73 (156)
T ss_dssp CHHHHHTTSSSCHHHHHHHHTTSSCCCHHHHHHHHHHTTCCHHHHH
T ss_pred CHHHHHHHhCcCHHHHHHHHcCCCCCCHHHHHHHHHHhCcCHHHHH
Confidence 6799999999999999999999999998 8899998877644
No 300
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=89.65 E-value=0.79 Score=45.00 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=40.4
Q ss_pred cCCcccCcceeeccceEEEEEEeeE--EEEeCC-------------------------EEEEccCCcEEEeCCCCceeEE
Q 022278 228 QPGDFLNVKEVHYNQHGLLLLEGQG--IYRLGD-------------------------SWYPVQAGDVLWMAPFVPQWYA 280 (300)
Q Consensus 228 ~PG~~~p~~~~H~~eh~~~iL~G~G--~~~~~g-------------------------~~~~v~~GD~i~~~~~~~H~~~ 280 (300)
.|+++.++ --|...+..+++++.| ..++-. ....++|||++|+|+|..|+..
T Consensus 171 tp~Gs~g~-~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~ 249 (489)
T 4diq_A 171 TPPNSQGF-APHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAE 249 (489)
T ss_dssp ECSSBCCS-CCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEE
T ss_pred cCCCcccc-cCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEE
Confidence 36665553 3456666677777766 222211 2578999999999999999999
Q ss_pred ecCCcc
Q 022278 281 ALGKTR 286 (300)
Q Consensus 281 n~G~e~ 286 (300)
+.+++.
T Consensus 250 s~~~~~ 255 (489)
T 4diq_A 250 CQDGVH 255 (489)
T ss_dssp BCSSCC
T ss_pred ecCCCc
Confidence 997643
No 301
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=89.51 E-value=2.1 Score=36.97 Aligned_cols=62 Identities=11% Similarity=0.153 Sum_probs=43.5
Q ss_pred cCCcccCcceeec---cceEEEEEEeeE-EEEeCC--------EEEEcc----CCcEEEeCCCCceeEEecCCccEEEE
Q 022278 228 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ----AGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 228 ~PG~~~p~~~~H~---~eh~~~iL~G~G-~~~~~g--------~~~~v~----~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
.+|.-=+.|-|+. +..-+.+++|+. .+.+|. +|..+. .+-.+|||+|+.|+|.|.++ +..++
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd-~a~~l 150 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALED-SIVIY 150 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSS-EEEEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCC-CeEEE
Confidence 4777666644433 567788999988 444442 366544 46889999999999999987 34443
No 302
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=89.12 E-value=1.1 Score=38.16 Aligned_cols=55 Identities=20% Similarity=0.258 Sum_probs=40.6
Q ss_pred CCCcCCCCCCCceEEEEEEECEEEEEEc-C-------------------------------------CcEEEeccCcEEE
Q 022278 113 ENARSALPPHDVERFIFVVQGSAMLTNA-S-------------------------------------GVSSKLMVDSYTY 154 (300)
Q Consensus 113 PG~~~~~~~h~gEEf~yVLeG~v~l~v~-g-------------------------------------g~~~~L~~Gds~y 154 (300)
+|+.+..|....+-+..++.|+=...+- - .-+.+|++||.+|
T Consensus 133 ~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~Ly 212 (235)
T 4gjz_A 133 QGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILF 212 (235)
T ss_dssp TTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEE
T ss_pred CCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEE
Confidence 3444444545568899999998777651 0 0146899999999
Q ss_pred eCCCCceEEeeCC
Q 022278 155 LPPNFAHSLRAEG 167 (300)
Q Consensus 155 fpa~~~H~~~N~~ 167 (300)
+|++--|.++|.+
T Consensus 213 iP~gW~H~V~~l~ 225 (235)
T 4gjz_A 213 IPVKYWHYVRALD 225 (235)
T ss_dssp ECTTCEEEEEESS
T ss_pred eCCCCcEEEEECC
Confidence 9999999999943
No 303
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=89.11 E-value=1.5 Score=38.21 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=48.2
Q ss_pred cCCCcCCCC----CCCceEEEEEEECEE-EEEEcC---C-------cEEEecc--CcEEEeCCCCceEEee-CCeEEE-E
Q 022278 112 QENARSALP----PHDVERFIFVVQGSA-MLTNAS---G-------VSSKLMV--DSYTYLPPNFAHSLRA-EGSATL-V 172 (300)
Q Consensus 112 ~PG~~~~~~----~h~gEEf~yVLeG~v-~l~v~g---g-------~~~~L~~--Gds~yfpa~~~H~~~N-~~~a~v-l 172 (300)
.+|---+.| ++...++++|++|++ .+.+ | + ..+.|.+ +-.+|+|+|..|.+.+ .+.|.+ .
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~V-DlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIV-DLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEE-ECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEE
Confidence 455444544 346899999999996 3444 3 2 3457876 6899999999999998 444544 5
Q ss_pred EEEeeccccC
Q 022278 173 VFERRYASLE 182 (300)
Q Consensus 173 ~v~~~y~~~~ 182 (300)
++...|.|..
T Consensus 157 ~~s~~Y~p~~ 166 (205)
T 3ryk_A 157 KVDEYYSADH 166 (205)
T ss_dssp EESSCCCTTT
T ss_pred EcCCCcCCCC
Confidence 5566676643
No 304
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=89.08 E-value=0.86 Score=38.00 Aligned_cols=69 Identities=16% Similarity=0.082 Sum_probs=46.8
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
...+.||..--......+.+++|++|.+.+...+|+...+.+||++=. ......+++..+.++++.+.+
T Consensus 97 ~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~~ 170 (202)
T 3bpz_A 97 FEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSV 170 (202)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEEH
T ss_pred ceEECCCCEEEECCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEEH
Confidence 445677754432334557899999999999865677889999998731 112344555677788887754
No 305
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=88.98 E-value=1 Score=38.49 Aligned_cols=69 Identities=14% Similarity=0.187 Sum_probs=47.5
Q ss_pred cCCCcCCCC-C--CCceEEEEEEECEE-EEEEcCC--------c--EEEecc--CcEEEeCCCCceEEee-CCeEEEEE-
Q 022278 112 QENARSALP-P--HDVERFIFVVQGSA-MLTNASG--------V--SSKLMV--DSYTYLPPNFAHSLRA-EGSATLVV- 173 (300)
Q Consensus 112 ~PG~~~~~~-~--h~gEEf~yVLeG~v-~l~v~gg--------~--~~~L~~--Gds~yfpa~~~H~~~N-~~~a~vl~- 173 (300)
.+|---+.| + +...++++|++|++ .+.+ |. + .+.|.+ +..+|+|+|..|.+.+ .+.|.++.
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~V-D~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAV-DLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEE-ECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEe
Confidence 355444555 3 67889999999997 5555 32 2 256665 4789999999999998 44555544
Q ss_pred EEeecccc
Q 022278 174 FERRYASL 181 (300)
Q Consensus 174 v~~~y~~~ 181 (300)
....|.|.
T Consensus 135 ~s~~Y~p~ 142 (185)
T 1ep0_A 135 CTELYHPE 142 (185)
T ss_dssp ESSCCCGG
T ss_pred cCCccChh
Confidence 45667664
No 306
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=88.91 E-value=2.5 Score=36.68 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=41.9
Q ss_pred cCCcccCcceeec---cceEEEEEEeeE-EEEeCC--------EEEEcc--C--CcEEEeCCCCceeEEecCCc
Q 022278 228 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ--A--GDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 228 ~PG~~~p~~~~H~---~eh~~~iL~G~G-~~~~~g--------~~~~v~--~--GD~i~~~~~~~H~~~n~G~e 285 (300)
.+|.-=+.|-|.. +..-+.+++|+. .+.+|. +|..+. + +-.+|||+|+-|+|.+.+++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD 128 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC
Confidence 4777766654433 667789999986 344442 366554 3 57899999999999999986
No 307
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=88.82 E-value=2.3 Score=39.58 Aligned_cols=30 Identities=10% Similarity=-0.013 Sum_probs=25.4
Q ss_pred EEEEccCCcEEEeCCCCceeEEecCCccEE
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALGKTRTR 288 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~ 288 (300)
....++|||++|+|+|..|...+.++++.-
T Consensus 218 ~~~~L~pGD~LyiP~gwwH~v~s~~~~~sl 247 (342)
T 1vrb_A 218 EIVNLTPGTMLYLPRGLWHSTKSDQATLAL 247 (342)
T ss_dssp EEEEECTTCEEEECTTCEEEEECSSCEEEE
T ss_pred eEEEECCCcEEEeCCCccEEEEECCCCceE
Confidence 567899999999999999999999754433
No 308
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=88.77 E-value=0.82 Score=39.55 Aligned_cols=59 Identities=25% Similarity=0.461 Sum_probs=43.0
Q ss_pred CCceEEEEEEECEE-EEEEcCC----------cEEEecc--CcEEEeCCCCceEEee-CCeEEEE-EEEeecccc
Q 022278 122 HDVERFIFVVQGSA-MLTNASG----------VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLV-VFERRYASL 181 (300)
Q Consensus 122 h~gEEf~yVLeG~v-~l~v~gg----------~~~~L~~--Gds~yfpa~~~H~~~N-~~~a~vl-~v~~~y~~~ 181 (300)
++...+++|++|++ .+.+ |. ..+.|.+ ...+|+|+|..|.+.+ .+.+.++ ++...|.|.
T Consensus 87 ~~q~Klv~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~~s~~Y~p~ 160 (196)
T 1wlt_A 87 KEQGKIIFVPKGRILDVAV-DVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFITHNEYSPP 160 (196)
T ss_dssp SCCEEEEEEEESEEEEEEE-ECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEEESSCCCGG
T ss_pred CCCceEEEEeCCEEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEeCCcCChh
Confidence 45789999999999 5555 32 2357775 5889999999999999 5555554 445666664
No 309
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=88.69 E-value=1.7 Score=34.24 Aligned_cols=82 Identities=7% Similarity=-0.006 Sum_probs=58.6
Q ss_pred ceeEEEEeeCCCCCcceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC--EEEEccCCcEEEeCCCCceeEEe
Q 022278 204 EVFQLRKLLPQAVPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD--SWYPVQAGDVLWMAPFVPQWYAA 281 (300)
Q Consensus 204 ~~~~~~~l~p~~~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g--~~~~v~~GD~i~~~~~~~H~~~n 281 (300)
|++..+-+.-.++.. -. +=.+.||.. ||.=.-...|.+-|++|+..+.+.| +|...++|+..-+|++..=.++.
T Consensus 24 GkV~S~~~~~~dG~~-kT--lGVm~PGe~-~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv 99 (111)
T 3hqx_A 24 GLCISHTVQFEDGTK-KT--LGVILPTEQ-PLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIET 99 (111)
T ss_dssp TTEEEEEEECTTSCE-EE--EEEECCCSS-CEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEEC
T ss_pred CeEEEEEEEeCCCCE-EE--EEEEecccc-ceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEE
Confidence 455666665444321 12 223458861 1212234456899999999999998 69999999999999998888887
Q ss_pred cCCccEEEEE
Q 022278 282 LGKTRTRYLL 291 (300)
Q Consensus 282 ~G~e~~~fi~ 291 (300)
+++..|+|
T Consensus 100 --~~~~~Y~C 107 (111)
T 3hqx_A 100 --DEVLDYVC 107 (111)
T ss_dssp --SSCEEEEE
T ss_pred --CcceeEEE
Confidence 48999999
No 310
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=88.00 E-value=2.1 Score=37.25 Aligned_cols=60 Identities=18% Similarity=0.369 Sum_probs=43.1
Q ss_pred CCceEEEEEEECEE-EEEEcCCc----------EEEeccC--cEEEeCCCCceEEee-CCeEEEE-EEEeeccccC
Q 022278 122 HDVERFIFVVQGSA-MLTNASGV----------SSKLMVD--SYTYLPPNFAHSLRA-EGSATLV-VFERRYASLE 182 (300)
Q Consensus 122 h~gEEf~yVLeG~v-~l~v~gg~----------~~~L~~G--ds~yfpa~~~H~~~N-~~~a~vl-~v~~~y~~~~ 182 (300)
++...+++|++|++ .+.+ |.+ .+.|.+. ..+|+|+|..|.+.+ .+.+.++ ++...|.|..
T Consensus 69 ~~q~Klv~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s~~Y~p~~ 143 (205)
T 1oi6_A 69 PGTAKYVYCARGKAMDIVI-DIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQD 143 (205)
T ss_dssp TCCCEEEEEEESCEEEEEE-CCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGGG
T ss_pred CCCceEEEEeCCEEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEecCCccCHhH
Confidence 45789999999997 5666 432 3566664 789999999999998 4445444 4567776643
No 311
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=87.94 E-value=0.7 Score=40.12 Aligned_cols=52 Identities=12% Similarity=0.054 Sum_probs=39.4
Q ss_pred CCceEEEEEEECEEEEEEcC-CcEEEeccCcEEEeCCCCce---EEeeCCeEEEEEE
Q 022278 122 HDVERFIFVVQGSAMLTNAS-GVSSKLMVDSYTYLPPNFAH---SLRAEGSATLVVF 174 (300)
Q Consensus 122 h~gEEf~yVLeG~v~l~v~g-g~~~~L~~Gds~yfpa~~~H---~~~N~~~a~vl~v 174 (300)
...--++||++|++++.+ + ++.+.|.+||++.+.....- .+..+..++++++
T Consensus 138 ~~~~~~v~~l~G~~~v~~-~~~~~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i 193 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISL-QGQPRGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAV 193 (200)
T ss_dssp CCSEEEEEESSSCEEEEE-TTEEEEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEc-CCCceeecCCCCEEEEeCCCccceeEeccCCceEEEEE
Confidence 345679999999999998 5 68899999999999776544 3333555666555
No 312
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=87.90 E-value=1.4 Score=37.70 Aligned_cols=68 Identities=13% Similarity=0.188 Sum_probs=46.7
Q ss_pred CCCcCCCC-C--CCceEEEEEEECEE-EEEEcCC--------c--EEEecc--CcEEEeCCCCceEEee-CCeEEEEE-E
Q 022278 113 ENARSALP-P--HDVERFIFVVQGSA-MLTNASG--------V--SSKLMV--DSYTYLPPNFAHSLRA-EGSATLVV-F 174 (300)
Q Consensus 113 PG~~~~~~-~--h~gEEf~yVLeG~v-~l~v~gg--------~--~~~L~~--Gds~yfpa~~~H~~~N-~~~a~vl~-v 174 (300)
+|---+.| + +....+++|++|++ .+.+ |. + .+.|.+ +..+|+|+|..|.+.+ .+.|.++. .
T Consensus 58 ~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~v-D~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~ 136 (184)
T 2ixk_A 58 RGVLRGLHYQIRQAQGKLVRATLGEVFDVAV-DLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKT 136 (184)
T ss_dssp TTBEEEEEEESSSCCCEEEEEEESEEEEEEE-ECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCceeeEEeCCCCCcCEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEeC
Confidence 55444555 2 57789999999997 5555 32 2 256666 4789999999999998 44555544 4
Q ss_pred Eeecccc
Q 022278 175 ERRYASL 181 (300)
Q Consensus 175 ~~~y~~~ 181 (300)
...|.|.
T Consensus 137 s~~Y~p~ 143 (184)
T 2ixk_A 137 TDFWAPE 143 (184)
T ss_dssp SSCCCGG
T ss_pred CCccChh
Confidence 6666653
No 313
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=87.90 E-value=3.1 Score=35.43 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=42.0
Q ss_pred CCcccCcceee---ccceEEEEEEeeEE-EEeC--------CEEEEcc----CCcEEEeCCCCceeEEecCCc
Q 022278 229 PGDFLNVKEVH---YNQHGLLLLEGQGI-YRLG--------DSWYPVQ----AGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 229 PG~~~p~~~~H---~~eh~~~iL~G~G~-~~~~--------g~~~~v~----~GD~i~~~~~~~H~~~n~G~e 285 (300)
+|.-=+.|-|+ .+..-+.+++|+.. +.+| |+|..+. .+-.+|+|+|+-|+|.+.+++
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 78777765454 56677899999863 3222 3476664 357899999999999999886
No 314
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=87.76 E-value=1.1 Score=38.81 Aligned_cols=69 Identities=12% Similarity=0.155 Sum_probs=51.0
Q ss_pred cCCCcCCCCCCCceEEEEEEE-CEE-EEEEcCC---------cEEEeccCcEEEeCCCCceEEee-CCeEEEE-EEEeec
Q 022278 112 QENARSALPPHDVERFIFVVQ-GSA-MLTNASG---------VSSKLMVDSYTYLPPNFAHSLRA-EGSATLV-VFERRY 178 (300)
Q Consensus 112 ~PG~~~~~~~h~gEEf~yVLe-G~v-~l~v~gg---------~~~~L~~Gds~yfpa~~~H~~~N-~~~a~vl-~v~~~y 178 (300)
.+|---+.|.|....+++|++ |++ .+.+ |. ....|..+-.+|+|+|..|.+.+ .+.|.++ .+...|
T Consensus 68 ~~GvlRGlH~h~q~Klv~~~~~G~v~dV~V-DlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s~~Y 146 (197)
T 1nxm_A 68 RKNVLRGLHAEPWDKYISVADGGKVLGTWV-DLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVNDYW 146 (197)
T ss_dssp ETTBEEEEEECSSCEEEEECSSCCEEEEEE-ECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESSCC
T ss_pred CCCCcceeeecccceEEEEcCCCEEEEEEE-ECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECCCcc
Confidence 455444566567889999999 995 6666 43 24788899999999999999998 5566665 445566
Q ss_pred ccc
Q 022278 179 ASL 181 (300)
Q Consensus 179 ~~~ 181 (300)
.|.
T Consensus 147 ~p~ 149 (197)
T 1nxm_A 147 ALE 149 (197)
T ss_dssp CGG
T ss_pred Chh
Confidence 554
No 315
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=87.69 E-value=1.1 Score=42.34 Aligned_cols=153 Identities=11% Similarity=0.042 Sum_probs=84.3
Q ss_pred EEEEEcCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEee
Q 022278 107 YLANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 107 ~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v-~gg~~---~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~~ 177 (300)
....+++|..--.....++.|++|++|.+.+.. .+|+. ..+.+||++=- ..-...++...++++++.+.+.
T Consensus 169 ~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i~r~ 248 (416)
T 3tnp_B 169 FEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALWGLDRV 248 (416)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEEEEEHH
T ss_pred EEEEeCCCCEEEeCCCCCceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEEEEeeh
Confidence 356677776543335677999999999999876 23443 46889997642 2223445555677887777443
Q ss_pred c-cccCCCCcceeec----cCCCCCCcccCCceeEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEee
Q 022278 178 Y-ASLENHITEQIVG----STDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQ 251 (300)
Q Consensus 178 y-~~~~g~~p~~~~~----~~~d~~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~ 251 (300)
- ..+-...|..... -...++.. .. |.+.+.. ....+....+++|..+= .+-..-.+.|+|++|+
T Consensus 249 ~f~~ll~~~~~~~~~~~~~~L~~v~lf--~~-------Ls~~el~~L~~~l~~~~~~~Ge~I~-~eGd~~~~~yiI~sG~ 318 (416)
T 3tnp_B 249 TFRRIIVKNNAKKRKMYESFIESLPFL--KS-------LEVSERLKVVDVIGTKVYNDGEQII-AQGDLADSFFIVESGE 318 (416)
T ss_dssp HHHHHHHHHHHHHSSSSSSSGGGCGGG--TT-------CCHHHHHHHHHHCEEEEECTTCEEE-CTTSCCCEEEEEEEEE
T ss_pred hhhhhhhcchhHHHHHHHHHHhhchHh--hc-------CCHHHHHHHHhhceEEEECCCCEEE-eCCCcCCEEEEEEeCE
Confidence 2 1110000110000 00001000 00 1111111 12334566788888773 3444556789999999
Q ss_pred EEEEeCCE------------EEEccCCcEE
Q 022278 252 GIYRLGDS------------WYPVQAGDVL 269 (300)
Q Consensus 252 G~~~~~g~------------~~~v~~GD~i 269 (300)
..+...+. ...+.+||++
T Consensus 319 v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 319 VKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp EEEECC------------CEEEEECTTCEE
T ss_pred EEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 99885532 4677899975
No 316
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=87.66 E-value=3.6 Score=36.29 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=42.1
Q ss_pred cCCcccCcceeec---cceEEEEEEeeE-EEEeCC--------EEEEcc--C--CcEEEeCCCCceeEEecCCc
Q 022278 228 QPGDFLNVKEVHY---NQHGLLLLEGQG-IYRLGD--------SWYPVQ--A--GDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 228 ~PG~~~p~~~~H~---~eh~~~iL~G~G-~~~~~g--------~~~~v~--~--GD~i~~~~~~~H~~~n~G~e 285 (300)
.+|.-=+.|-|+. +..-+.+++|+. .+.+|. +|..+. + +-.+|||+|+.|+|.|.+++
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 147 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN 147 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC
Confidence 4777666654433 667789999996 444443 366553 3 57899999999999999986
No 317
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=87.14 E-value=2.5 Score=37.27 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=42.8
Q ss_pred CCceEEEEEEECEE-EEEEcCC----------cEEEeccC--cEEEeCCCCceEEee-CCeEEE-EEEEeecccc
Q 022278 122 HDVERFIFVVQGSA-MLTNASG----------VSSKLMVD--SYTYLPPNFAHSLRA-EGSATL-VVFERRYASL 181 (300)
Q Consensus 122 h~gEEf~yVLeG~v-~l~v~gg----------~~~~L~~G--ds~yfpa~~~H~~~N-~~~a~v-l~v~~~y~~~ 181 (300)
++...+++|++|++ .+.+ |. ..+.|.+. ..+|+|+|..|.+.+ .+.+.+ .++...|.|.
T Consensus 88 ~~q~KlV~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~~s~~Y~p~ 161 (225)
T 1upi_A 88 PSQAKYVTCVSGSVFDVVV-DIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQ 161 (225)
T ss_dssp TCCCEEEEEEESEEEEEEE-CCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEESSCCCTT
T ss_pred CCcceEEEEeCCeEEEEEE-ECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEecCCccCHH
Confidence 45789999999997 5666 43 23566664 789999999999998 444544 4466777664
No 318
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=86.32 E-value=0.34 Score=46.09 Aligned_cols=28 Identities=7% Similarity=-0.082 Sum_probs=24.0
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...=++||+||+|+|++|+..|..+
T Consensus 291 ~~~~~~Q~~GeavfiPaG~~HQV~Nl~~ 318 (392)
T 2ypd_A 291 RTCTLIQFLGDAIVLPAGALHQVQNFHS 318 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSE
T ss_pred eeEEEEEcCCCEEEecCCCHHHHhcccc
Confidence 4455666899999999999999999975
No 319
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=86.11 E-value=1.9 Score=40.10 Aligned_cols=66 Identities=20% Similarity=0.228 Sum_probs=46.9
Q ss_pred EEcC-CCcCCCCCCCceEEEEEEECEEEEEEc-C-------------------------------------CcEEEeccC
Q 022278 110 NMQE-NARSALPPHDVERFIFVVQGSAMLTNA-S-------------------------------------GVSSKLMVD 150 (300)
Q Consensus 110 ~l~P-G~~~~~~~h~gEEf~yVLeG~v~l~v~-g-------------------------------------g~~~~L~~G 150 (300)
-+.| |+.+..|....+-|+..+.|+=.+.+- . ..+.+|++|
T Consensus 146 ~~gp~g~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pG 225 (342)
T 1vrb_A 146 YAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPG 225 (342)
T ss_dssp EEECSSCCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTT
T ss_pred EEeCCCCCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCC
Confidence 3444 556666655667899999998666652 0 135699999
Q ss_pred cEEEeCCCCceEEeeC--CeEEEEEEE
Q 022278 151 SYTYLPPNFAHSLRAE--GSATLVVFE 175 (300)
Q Consensus 151 ds~yfpa~~~H~~~N~--~~a~vl~v~ 175 (300)
|.+|+|++-.|..++. +.+-=+.+.
T Consensus 226 D~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 226 TMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp CEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred cEEEeCCCccEEEEECCCCceEEEEEC
Confidence 9999999999999984 344444444
No 320
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=85.44 E-value=5.8 Score=34.43 Aligned_cols=66 Identities=9% Similarity=0.078 Sum_probs=45.6
Q ss_pred EEEecCCcccCcceee---ccceEEEEEEeeE-EEEeC--------CEEEE--cc--CCcEEEeCCCCceeEEecCCccE
Q 022278 224 IMDFQPGDFLNVKEVH---YNQHGLLLLEGQG-IYRLG--------DSWYP--VQ--AGDVLWMAPFVPQWYAALGKTRT 287 (300)
Q Consensus 224 ~~tl~PG~~~p~~~~H---~~eh~~~iL~G~G-~~~~~--------g~~~~--v~--~GD~i~~~~~~~H~~~n~G~e~~ 287 (300)
.++..+|.-=+.|-|. .+..-+.+++|+. .+.+| |+|.. +. .+-.+|||+|+-|+|.|.++. .
T Consensus 74 S~S~~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a 152 (205)
T 3ryk_A 74 SYSAEAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-T 152 (205)
T ss_dssp EEESSTTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-E
T ss_pred EEeCCCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-E
Confidence 3444688887775554 3667789999996 22232 34544 44 367999999999999999975 4
Q ss_pred EEE
Q 022278 288 RYL 290 (300)
Q Consensus 288 ~fi 290 (300)
.++
T Consensus 153 ~~~ 155 (205)
T 3ryk_A 153 IVM 155 (205)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 321
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=85.24 E-value=2.8 Score=36.73 Aligned_cols=69 Identities=17% Similarity=0.245 Sum_probs=46.7
Q ss_pred cCCCcCCCC----CCCceEEEEEEECEE-EEEEcCC----------cEEEeccC--cEEEeCCCCceEEee-CCeEEEE-
Q 022278 112 QENARSALP----PHDVERFIFVVQGSA-MLTNASG----------VSSKLMVD--SYTYLPPNFAHSLRA-EGSATLV- 172 (300)
Q Consensus 112 ~PG~~~~~~----~h~gEEf~yVLeG~v-~l~v~gg----------~~~~L~~G--ds~yfpa~~~H~~~N-~~~a~vl- 172 (300)
.+|---+.| ++....+++|++|++ .+.+ |. ..+.|.+. ..+|+|+|..|.+.+ .+.+.++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~V-DlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVV-DLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEE-ECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEE
Confidence 355433444 345789999999997 5555 32 23567664 689999999999998 4445444
Q ss_pred EEEeecccc
Q 022278 173 VFERRYASL 181 (300)
Q Consensus 173 ~v~~~y~~~ 181 (300)
++...|.|.
T Consensus 142 ~~s~~Y~p~ 150 (216)
T 2c0z_A 142 LSSGTYDPA 150 (216)
T ss_dssp EESSCCCTT
T ss_pred ecCCccCHH
Confidence 456677664
No 322
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=85.17 E-value=1.7 Score=40.44 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=23.7
Q ss_pred EEEEccCCcEEEeCCCCceeEEecCC
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
-...++|||++|+|+|-.|+..|.++
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~l~d 286 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIESLLN 286 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECTT
T ss_pred EEEEECCCCEEEECCCCcEEEEEcCC
Confidence 56788999999999999999999974
No 323
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=84.97 E-value=2.4 Score=36.08 Aligned_cols=69 Identities=17% Similarity=0.273 Sum_probs=46.1
Q ss_pred CCCcCCCC----CCCceEEEEEEECEE-EEEEcC-------C--cEEEecc--CcEEEeCCCCceEEee-CCeEEEEE-E
Q 022278 113 ENARSALP----PHDVERFIFVVQGSA-MLTNAS-------G--VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLVV-F 174 (300)
Q Consensus 113 PG~~~~~~----~h~gEEf~yVLeG~v-~l~v~g-------g--~~~~L~~--Gds~yfpa~~~H~~~N-~~~a~vl~-v 174 (300)
+|---+.| ++....+++|++|++ .+.++. | ..+.|.+ +..+|+|+|..|.+.+ .+.|.++. .
T Consensus 56 ~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~ 135 (183)
T 1dzr_A 56 KNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKA 135 (183)
T ss_dssp TTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEE
T ss_pred CCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEc
Confidence 55444445 247789999999997 555521 1 2356666 4789999999999998 45555443 4
Q ss_pred Eeecccc
Q 022278 175 ERRYASL 181 (300)
Q Consensus 175 ~~~y~~~ 181 (300)
...|.|.
T Consensus 136 s~~Y~p~ 142 (183)
T 1dzr_A 136 TNYYSPS 142 (183)
T ss_dssp SSCCCTT
T ss_pred CCccCHh
Confidence 5667663
No 324
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=84.77 E-value=3.5 Score=36.06 Aligned_cols=58 Identities=9% Similarity=0.162 Sum_probs=41.5
Q ss_pred cCCcccCcceeec---cceEEEEEEeeEE-EEeC--------CEEEEcc--C--CcEEEeCCCCceeEEecCCc
Q 022278 228 QPGDFLNVKEVHY---NQHGLLLLEGQGI-YRLG--------DSWYPVQ--A--GDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 228 ~PG~~~p~~~~H~---~eh~~~iL~G~G~-~~~~--------g~~~~v~--~--GD~i~~~~~~~H~~~n~G~e 285 (300)
.+|..=+.|-|+. +..-+.+++|+.. +.+| |+|..+. + +-.+|||+|+-|+|.|.+++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~ 136 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE 136 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC
Confidence 4777766654443 6777899999963 3333 2366553 3 46899999999999999886
No 325
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=84.29 E-value=3.5 Score=37.71 Aligned_cols=66 Identities=9% Similarity=0.181 Sum_probs=47.8
Q ss_pred EEEecCCcccCcce--eeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecC--CccEEEE
Q 022278 224 IMDFQPGDFLNVKE--VHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALG--KTRTRYL 290 (300)
Q Consensus 224 ~~tl~PG~~~p~~~--~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G--~e~~~fi 290 (300)
.++|+.|..+.. + .-..|=++..|.|+|.+..+|+.+.+..-|.+|+|.|..-...+.. .+|++|.
T Consensus 61 ~l~L~~~~~~~~-~~fl~~rE~~iV~lgG~~~V~vdg~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 61 ELEIILDKELGV-DYFLERRELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp CEECCCSGGGTS-SSTTTTEEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred eEEcCCCceecc-cccCCCcEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 466777766654 3 2344556788999999999999999999999999999875444432 2445543
No 326
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=84.01 E-value=5.5 Score=35.47 Aligned_cols=75 Identities=21% Similarity=0.257 Sum_probs=47.1
Q ss_pred CcEEEEEEEEcCCCcCCCCCC-CceEEEEEEEC---EEEEEEc---------------CC--------cEEEeccCcEEE
Q 022278 102 SHFVMYLANMQENARSALPPH-DVERFIFVVQG---SAMLTNA---------------SG--------VSSKLMVDSYTY 154 (300)
Q Consensus 102 ~~f~~~lv~l~PG~~~~~~~h-~gEEf~yVLeG---~v~l~v~---------------gg--------~~~~L~~Gds~y 154 (300)
+.++--++.+.||+.++.|.| .-+|=+.+--| .|+|... || ...+|.||+++-
T Consensus 104 k~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT 183 (246)
T 3kmh_A 104 KCYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC 183 (246)
T ss_dssp CCEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE
T ss_pred CcceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe
Confidence 356666777788877777633 34555555555 2233221 33 445789999999
Q ss_pred eCCCCceEEeeC-C--eEEEEEEEe
Q 022278 155 LPPNFAHSLRAE-G--SATLVVFER 176 (300)
Q Consensus 155 fpa~~~H~~~N~-~--~a~vl~v~~ 176 (300)
++|++-|.|... + ++-+-=|+.
T Consensus 184 l~Pg~~H~F~ae~g~G~vligEVSt 208 (246)
T 3kmh_A 184 LPPGLYHSFWAEAGFGDVLVGEVSS 208 (246)
T ss_dssp ECTTEEEEEEECTTSCCEEEEEEEE
T ss_pred cCCCCEEEEEecCCCccEEEEEccc
Confidence 999999999973 3 344444443
No 327
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=83.52 E-value=2.9 Score=33.26 Aligned_cols=50 Identities=22% Similarity=0.331 Sum_probs=39.3
Q ss_pred CCceEEEEEEECEEEEEE-c-C-----CcEEEeccCcEEEeCCCCceEEeeCCeEEE
Q 022278 122 HDVERFIFVVQGSAMLTN-A-S-----GVSSKLMVDSYTYLPPNFAHSLRAEGSATL 171 (300)
Q Consensus 122 h~gEEf~yVLeG~v~l~v-~-g-----g~~~~L~~Gds~yfpa~~~H~~~N~~~a~v 171 (300)
.+.-.-+-||+|++++.. . + .+...+.+|+...++|...|++.-..++++
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f 92 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQF 92 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEE
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEE
Confidence 456778899999999984 2 1 245789999999999999999996444444
No 328
>1rzs_A Antirepressor, regulatory protein CRO; helix-turn-helix, DNA-binding protein, structural evolution, transcription; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=83.32 E-value=0.1 Score=36.31 Aligned_cols=36 Identities=8% Similarity=0.003 Sum_probs=28.7
Q ss_pred CCcccccccCCCCcceeeecCCCCChhh----hhcccCCcce
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPSH----LQDLPGFTRS 65 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps~----I~~~lg~trs 65 (300)
|+++||+++|+|++-+||.| + .-|+. |.+++|-...
T Consensus 12 tq~~lA~~lGvs~~~Vs~we-~-~~p~~~~~~i~~~~~g~v~ 51 (61)
T 1rzs_A 12 TQRAVAKALGISDAAVSQWK-E-VIPEKDAYRLEIVTAGALK 51 (61)
T ss_dssp SHHHHHHHHTCCHHHHHHCC-S-BCCHHHHHHHHHHTTSCSC
T ss_pred CHHHHHHHhCCCHHHHHHHH-h-hCCHHHHHHHHHHHCCCce
Confidence 89999999999999999999 3 44554 7777765444
No 329
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=83.27 E-value=5.2 Score=32.17 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=38.4
Q ss_pred CCceEEEEEEECEEEEE-EcC-C-----cEEEeccCcEEEeCCCCceEEee-CCeEEE
Q 022278 122 HDVERFIFVVQGSAMLT-NAS-G-----VSSKLMVDSYTYLPPNFAHSLRA-EGSATL 171 (300)
Q Consensus 122 h~gEEf~yVLeG~v~l~-v~g-g-----~~~~L~~Gds~yfpa~~~H~~~N-~~~a~v 171 (300)
.+.-+-+-||+|++++. +++ | +.....+|+...+||+..|+++. ..++++
T Consensus 37 ~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f 94 (127)
T 3bb6_A 37 PGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYF 94 (127)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEE
T ss_pred CCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEE
Confidence 34568899999999987 322 2 34578999999999999999996 445554
No 330
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=82.81 E-value=1.2 Score=34.21 Aligned_cols=69 Identities=9% Similarity=0.202 Sum_probs=45.3
Q ss_pred EEEEc-CCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeCC---CCce--EE-eeCCeEEEEEEEe
Q 022278 108 LANMQ-ENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLPP---NFAH--SL-RAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~-PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfpa---~~~H--~~-~N~~~a~vl~v~~ 176 (300)
..++. +|..--......+.+++|++|.+.+...+|+...+.+||++=..+ +.++ .. ...++++++.+.+
T Consensus 41 ~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~~~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 116 (134)
T 2d93_A 41 FEVVEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCIAQ 116 (134)
T ss_dssp EEEECSSSCEEECTTCEECEEEECCBSCEEEECSSSCEEEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEEEH
T ss_pred EEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEcCCCcEEEecCCCccChhHhcCCCcceeEEEEEecceEEEEEeH
Confidence 45566 665433333456789999999999986567778999999763222 2222 33 4466788887743
No 331
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=82.35 E-value=5.6 Score=30.44 Aligned_cols=68 Identities=9% Similarity=-0.008 Sum_probs=45.2
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. +|+. ..+.+||++=. ......++...++++++.+.+
T Consensus 48 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~g~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~~ 121 (139)
T 3ocp_A 48 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDR 121 (139)
T ss_dssp EEEECSSCEEECTTSCCCEEEEEEECCEEEEE-TTEEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEEEH
T ss_pred EEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE-CCEEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEEcH
Confidence 34556665433334567899999999999987 7665 68899997632 222334455567788887743
No 332
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=82.32 E-value=6.6 Score=33.82 Aligned_cols=64 Identities=9% Similarity=0.061 Sum_probs=45.4
Q ss_pred EEEecCCcccCcceeeccceEEEEEE-eeE-EE-EeC------CEEEE--ccCCcEEEeCCCCceeEEecCCccEEEE
Q 022278 224 IMDFQPGDFLNVKEVHYNQHGLLLLE-GQG-IY-RLG------DSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 224 ~~tl~PG~~~p~~~~H~~eh~~~iL~-G~G-~~-~~~------g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi 290 (300)
..+ .+|.-=+. |-|.+..-+.+++ |+. .+ .+. |+|.. +.++-.+|+|+|+-|+|.+.++. .+++
T Consensus 65 S~s-~~GvlRGl-H~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~ 139 (197)
T 1nxm_A 65 SFS-RKNVLRGL-HAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYS 139 (197)
T ss_dssp EEE-ETTBEEEE-EECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEE
T ss_pred EEC-CCCCccee-eecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEE
Confidence 344 67777676 4467778889999 993 33 333 45654 44788999999999999999865 4433
No 333
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=82.23 E-value=4.3 Score=34.22 Aligned_cols=64 Identities=8% Similarity=0.080 Sum_probs=49.0
Q ss_pred cEEEEEEEEcCCCcCCCCCCCceEEEEEEECE-EEEEE--cCCcEEE------eccCcE--EEeCCCCceEEeeC
Q 022278 103 HFVMYLANMQENARSALPPHDVERFIFVVQGS-AMLTN--ASGVSSK------LMVDSY--TYLPPNFAHSLRAE 166 (300)
Q Consensus 103 ~f~~~lv~l~PG~~~~~~~h~gEEf~yVLeG~-v~l~v--~gg~~~~------L~~Gds--~yfpa~~~H~~~N~ 166 (300)
....++..|.+|..+..|....+|.-|...|. +++.+ .+|+..+ +.+|+. +++|+|..+..++.
T Consensus 48 ~~T~IYfLL~~g~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 48 LWSSIYFLLRTGEVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp SCEEEEEEEETTCCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEES
T ss_pred cceEEEEEECCCCCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEEC
Confidence 35566667788887777766789999999997 57766 3455444 667888 99999999999874
No 334
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=81.92 E-value=7.2 Score=30.28 Aligned_cols=67 Identities=18% Similarity=0.068 Sum_probs=45.8
Q ss_pred EEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeCC-------CCceEEeeCCeEEEEEEEe
Q 022278 109 ANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP-------NFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 109 v~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfpa-------~~~H~~~N~~~a~vl~v~~ 176 (300)
.++++|..--......+.+++|++|.+.+.. +++. ..+.+||++=..+ ....+.+..++++++.+.+
T Consensus 53 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 127 (160)
T 4f8a_A 53 VHCAPGDLIYHAGESVDSLCFVVSGSLEVIQ-DDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIKR 127 (160)
T ss_dssp EEECTTCEEECTTSBCCEEEEEEESEEEEEE-TTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEEEH
T ss_pred eeeCCCCEEEeCCCCccEEEEEEeeEEEEEE-CCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEEcH
Confidence 4556665432233456899999999999998 6554 6899999887532 2334455577888888744
No 335
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=81.86 E-value=1.6 Score=40.78 Aligned_cols=43 Identities=16% Similarity=0.373 Sum_probs=34.3
Q ss_pred cceEEEEEEeeEEEEeCC----EEEEccCCcEEEeCCCCceeEEecC
Q 022278 241 NQHGLLLLEGQGIYRLGD----SWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 241 ~eh~~~iL~G~G~~~~~g----~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
-||-|.|++|+-.++-++ -...++|+|-.|+.|+++|.+.-.|
T Consensus 354 ge~hY~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~G 400 (443)
T 3g7d_A 354 AENHYVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGTG 400 (443)
T ss_dssp SEEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESSE
T ss_pred ccceEEEecCceEEEecCCCCccceEECCCCceeecccccccccCCc
Confidence 355678999988887652 2456899999999999999998554
No 336
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=81.63 E-value=7.3 Score=30.47 Aligned_cols=68 Identities=10% Similarity=0.013 Sum_probs=45.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. +|+. ..+.+||++=. ......++...++++++.+.+
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~ 136 (154)
T 3pna_A 63 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDR 136 (154)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEEEE-TTEEEEEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEE-CCEEEEEecCCCEeeehHhhcCCCcceEEEECcceEEEEEeH
Confidence 35567775443334567899999999999998 7665 67999998632 122233444566788777743
No 337
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=81.08 E-value=4.2 Score=35.43 Aligned_cols=150 Identities=11% Similarity=0.030 Sum_probs=83.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeC---CC--CceEEeeCCeEEEEEEEeec-cc
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLP---PN--FAHSLRAEGSATLVVFERRY-AS 180 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfp---a~--~~H~~~N~~~a~vl~v~~~y-~~ 180 (300)
..++++|..--.....++.+++|++|.+.+.. +|+. ..+.+||++=-- .+ ...++...++++++.+.+.- ..
T Consensus 64 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~-~g~~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~ 142 (291)
T 2qcs_B 64 PVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV-NNEWATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRR 142 (291)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEEEE-TTEEEEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHHH
T ss_pred EEEECCCCEEEeCCCCCceEEEEeeeEEEEEE-CCeEEEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEEEhHHHHH
Confidence 45566765443334567889999999999998 6654 789999987321 12 23445556778888774321 11
Q ss_pred cCCCCcceee----ccCCCCCCcccCCceeEEEEeeCC-CCC-cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEE
Q 022278 181 LENHITEQIV----GSTDKQPLLETPGEVFQLRKLLPQ-AVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 254 (300)
Q Consensus 181 ~~g~~p~~~~----~~~~d~~~~~~~g~~~~~~~l~p~-~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~ 254 (300)
.-...|.... .-...++.. .. ++. ... ....+....+++|..+= .+.....+.|+|++|+..+
T Consensus 143 ~~~~~~~~~~~~~~~~l~~~~lf--~~--------l~~~~~~~l~~~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~ 211 (291)
T 2qcs_B 143 ILMGSTLRKRKMYEEFLSKVSIL--ES--------LDKWERLTVADALEPVQFEDGQKIV-VQGEPGDEFFIILEGSAAV 211 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGG--TT--------CCHHHHHHHHHHCEEEEECTTCEEE-CTTSCCCEEEEEEEEEEEE
T ss_pred HHhhhHHHHHHHHHHHHhhchHh--hh--------CCHHHHHHHHhhcEEEEECCCCEEE-eCCccCCEEEEEEeCEEEE
Confidence 0000011000 000011000 00 010 001 12235677888888773 3444455789999999988
Q ss_pred Ee---CC----EEEEccCCcEE
Q 022278 255 RL---GD----SWYPVQAGDVL 269 (300)
Q Consensus 255 ~~---~g----~~~~v~~GD~i 269 (300)
.. +| ....+.+||++
T Consensus 212 ~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 212 LQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp EEECSTTSCEEEEEEECTTCEE
T ss_pred EEecCCCCccEEEEEeCCCCEe
Confidence 73 23 35678999986
No 338
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=80.54 E-value=2.2 Score=41.25 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=22.8
Q ss_pred EEEEccCCcEEEeCCCCceeEEecC
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALG 283 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G 283 (300)
....++|||++|+|+|..|+..+.+
T Consensus 199 ~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 199 HEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCS
T ss_pred eEEEECCCcEEEECCCceEEEEecC
Confidence 4678999999999999999999885
No 339
>2pij_A Prophage PFL 6 CRO; transcription factor, helix-turn-helix, structural evolution, transcription; 1.70A {Pseudomonas fluorescens}
Probab=80.04 E-value=0.084 Score=36.61 Aligned_cols=27 Identities=4% Similarity=-0.036 Sum_probs=25.6
Q ss_pred CCcccccccCCCCcceeeecCCCCChh
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPS 54 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps 54 (300)
|+.++|+++|+|++.+|+.||+...|+
T Consensus 15 s~~~~A~~lgis~~~vs~~~~~~~~~~ 41 (67)
T 2pij_A 15 TQSALAAALGVNQSAISQMVRAGRSIE 41 (67)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCC
Confidence 889999999999999999999998887
No 340
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=79.97 E-value=2.8 Score=38.22 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=38.7
Q ss_pred cceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCC--ccEEEE
Q 022278 241 NQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGK--TRTRYL 290 (300)
Q Consensus 241 ~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~--e~~~fi 290 (300)
.|=++..|.|+|.+..+|+.+.+..-|.+|+|.|..-...+..+ .|++|.
T Consensus 79 rE~~iV~l~G~~~V~vdG~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 79 RELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp EEEEEEECSSCEEEEETTEEEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred cEEEEEEccCeEEEEECCEEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 34467789999999999999999999999999999754444433 345443
No 341
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=79.47 E-value=4.1 Score=39.32 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=41.0
Q ss_pred EcCCCcCC--CCCCCceEEEEEEECEEEEEEc-C-------------------CcEEEeccCcEEEeCCCCceEEee
Q 022278 111 MQENARSA--LPPHDVERFIFVVQGSAMLTNA-S-------------------GVSSKLMVDSYTYLPPNFAHSLRA 165 (300)
Q Consensus 111 l~PG~~~~--~~~h~gEEf~yVLeG~v~l~v~-g-------------------g~~~~L~~Gds~yfpa~~~H~~~N 165 (300)
+.|+++.. .|....+-|+..+.|+=...+- . ..+.+|++||.+|+|++..|..++
T Consensus 145 ~~~~g~~g~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 145 ITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EECTTCBCSCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred ECCCCCCCccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 34444433 5545668899999998777751 1 125799999999999999999997
No 342
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=78.50 E-value=11 Score=31.12 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=46.5
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEeccCcEEEeCCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v-~gg~~---~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. ....+....++++++.+.+
T Consensus 29 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~v~~i~~ 99 (220)
T 2fmy_A 29 EQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTTILYTDI 99 (220)
T ss_dssp EEEECTTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEEEEEEEH
T ss_pred eeEeCCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEEEEEEeH
Confidence 45567775443334566889999999999854 34554 46789998866 3445566677899988854
No 343
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=78.49 E-value=0.11 Score=36.83 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=29.5
Q ss_pred CCcccccccCCCCcceeeecCCCC-----Chhh------hhcccCCcceeee
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTL-----SPSH------LQDLPGFTRSVYK 68 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~-----sps~------I~~~lg~trs~f~ 68 (300)
|+.+||+++|+|++-+|++.||.. ||.. +++.||..+....
T Consensus 2 T~~diA~~aGVS~sTVSrvLng~~~~~~vs~et~~rI~~aa~~lgY~pn~~a 53 (65)
T 1uxc_A 2 KLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVA 53 (65)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTCTTTTTCTTHHHHHHHHHHHHHTCCCC---
T ss_pred CHHHHHHHHCcCHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHhCCCccHHH
Confidence 678899999999999999999987 4433 4445676655443
No 344
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=77.81 E-value=8.5 Score=31.45 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=45.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeC----CC--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP----PN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfp----a~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=.. .. ...++...++++++.+.+
T Consensus 21 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 100 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 100 (210)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcEEEEEEcH
Confidence 44566765443334556899999999999975 24554 457999988432 22 334455577888888854
Q ss_pred e
Q 022278 177 R 177 (300)
Q Consensus 177 ~ 177 (300)
.
T Consensus 101 ~ 101 (210)
T 3ryp_A 101 K 101 (210)
T ss_dssp H
T ss_pred H
Confidence 3
No 345
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=77.59 E-value=6.7 Score=29.72 Aligned_cols=69 Identities=9% Similarity=0.089 Sum_probs=43.3
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCc------EEEeccCcEEEeC---CCCce--EEeeCCeEEEEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGV------SSKLMVDSYTYLP---PNFAH--SLRAEGSATLVVF 174 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~------~~~L~~Gds~yfp---a~~~H--~~~N~~~a~vl~v 174 (300)
..++++|..--......+.+++|++|.+.+.. .+|+ ...+.+||.+=.. .+.++ +....++++++.+
T Consensus 31 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 31 EKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred EEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 45567775443334557899999999999964 1333 3468999987533 23333 4445677888877
Q ss_pred Ee
Q 022278 175 ER 176 (300)
Q Consensus 175 ~~ 176 (300)
.+
T Consensus 111 ~~ 112 (142)
T 3mdp_A 111 NG 112 (142)
T ss_dssp EH
T ss_pred eH
Confidence 44
No 346
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=77.54 E-value=2 Score=32.83 Aligned_cols=68 Identities=9% Similarity=-0.010 Sum_probs=46.0
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEe-----CCCCceeEEecCCccEEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWM-----APFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~-----~~~~~H~~~n~G~e~~~fi 290 (300)
.++..++++|..+- .+-....+.|+|++|...+...+ ...+.+||++-. ..-.+..+.+..+..+-.|
T Consensus 33 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 105 (138)
T 1vp6_A 33 ALRARTVPAGAVIC-RIGEPGDRMFFVVEGSVSVATPN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSL 105 (138)
T ss_dssp HCEEEEECTTCEEE-CTTSCCCEEEEEEESCEEECSSS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEE
T ss_pred hhcEEEeCCCCEEE-eCCCCcceEEEEEeeEEEEEeCC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEE
Confidence 35678899999884 34555667899999999998776 568899998532 1122445666555444333
No 347
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=77.00 E-value=3 Score=38.58 Aligned_cols=27 Identities=19% Similarity=0.118 Sum_probs=24.0
Q ss_pred EEEEccCCcEEEeCCCCceeEEecCCc
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G~e 285 (300)
-...++|||++|+|+|-.|...|.+..
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~l~~s 266 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVISEEFG 266 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCCEEEECCCCeEEEeeCCCE
Confidence 467889999999999999999999654
No 348
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=76.95 E-value=2.3 Score=32.60 Aligned_cols=48 Identities=8% Similarity=0.043 Sum_probs=37.2
Q ss_pred EEEEEEec-CCcccCcceeeccceEEEEEEeeEEEEe-CCEEEEccCCcEE
Q 022278 221 NIHIMDFQ-PGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~-PG~~~p~~~~H~~eh~~~iL~G~G~~~~-~g~~~~v~~GD~i 269 (300)
.++..+++ +|..+- .+-....+.|+|++|...+.. +|+...+.+||++
T Consensus 38 ~~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~g~~~~l~~G~~f 87 (134)
T 2d93_A 38 VMIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISHPDGKVENLFMGNSF 87 (134)
T ss_dssp TEEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEECSSSCEEEECTTCEE
T ss_pred hheEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEcCCCcEEEecCCCcc
Confidence 46788888 898873 344555678999999998875 5677889999976
No 349
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=76.81 E-value=9.3 Score=30.33 Aligned_cols=50 Identities=12% Similarity=0.073 Sum_probs=40.2
Q ss_pred EEEEEEeeEEEEe-C-------CEEEEccCCcEEEeCCCCceeEEecCCccE--EEEEEe
Q 022278 244 GLLLLEGQGIYRL-G-------DSWYPVQAGDVLWMAPFVPQWYAALGKTRT--RYLLYK 293 (300)
Q Consensus 244 ~~~iL~G~G~~~~-~-------g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~--~fi~~k 293 (300)
-+-||+|+..|+. + .+..-+.+|+..+++|...|-++.++|..+ +|.|=+
T Consensus 41 kL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~leFyc~~ 100 (119)
T 3dl3_A 41 QICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFNINFWSDQ 100 (119)
T ss_dssp EEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEEEEEEECc
Confidence 5789999999993 3 267788999999999999999997777543 555543
No 350
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=76.50 E-value=11 Score=31.31 Aligned_cols=67 Identities=9% Similarity=-0.053 Sum_probs=46.3
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEeccCcEEEeCCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYLPPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v-~gg~~---~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+= .....+....++++++.+.+
T Consensus 25 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~~v~~i~~ 95 (222)
T 1ft9_A 25 SKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERTEVRFADI 95 (222)
T ss_dssp EEEECTTCEEECTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCEEEEEECH
T ss_pred EEEECCCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccceEEEEEeH
Confidence 45567775543334456789999999999853 25654 4678999887 33455566677899988854
No 351
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=76.30 E-value=18 Score=35.44 Aligned_cols=71 Identities=18% Similarity=0.313 Sum_probs=47.7
Q ss_pred EEEEcCCCcC--CCCCCCceEEEEEEECEEEEEEcC--C----------------------cEEEeccCcEEEeCCCCce
Q 022278 108 LANMQENARS--ALPPHDVERFIFVVQGSAMLTNAS--G----------------------VSSKLMVDSYTYLPPNFAH 161 (300)
Q Consensus 108 lv~l~PG~~~--~~~~h~gEEf~yVLeG~v~l~v~g--g----------------------~~~~L~~Gds~yfpa~~~H 161 (300)
-+.+.|+++. ..|....+-|+.-+.|+=...+.. . .+.+|++||.+|+|+|..|
T Consensus 167 N~Y~tp~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEEECSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred eEEecCCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 3455566654 355556678888888887776611 0 1589999999999999999
Q ss_pred EEeeC-CeEEEEEEEeec
Q 022278 162 SLRAE-GSATLVVFERRY 178 (300)
Q Consensus 162 ~~~N~-~~a~vl~v~~~y 178 (300)
..++. ....+-+-..-|
T Consensus 247 ~~~s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 247 QAECQDGVHSLHLTLSTY 264 (489)
T ss_dssp EEEBCSSCCEEEEEEEEC
T ss_pred EEEecCCCceEEEeeccc
Confidence 99983 333333333334
No 352
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=76.07 E-value=15 Score=31.76 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=41.9
Q ss_pred CCceEEEEEEECEE-EEEEcCC----------cEEEecc--CcEEEeCCCCceEEee-CCeEEEE-EEEeecccc
Q 022278 122 HDVERFIFVVQGSA-MLTNASG----------VSSKLMV--DSYTYLPPNFAHSLRA-EGSATLV-VFERRYASL 181 (300)
Q Consensus 122 h~gEEf~yVLeG~v-~l~v~gg----------~~~~L~~--Gds~yfpa~~~H~~~N-~~~a~vl-~v~~~y~~~ 181 (300)
+....+++|++|++ .+-+ |- ....|.+ +-.+|+|+|..|.+.+ .+.+.++ .+...|.|.
T Consensus 66 ~~q~KlV~~~~G~v~DV~V-DlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~~t~~Y~p~ 139 (201)
T 4hn1_A 66 PGQAKYSVCVRGAGLDVVV-DVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFLCSSGYAPA 139 (201)
T ss_dssp SCCCEEEEEEESEEEEEEE-CCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEEESSCCCGG
T ss_pred CCceEEEEEeCCeEEEEEE-ECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEeCCCCcChh
Confidence 46789999999996 3444 32 2456776 6789999999999998 4455554 445556653
No 353
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=75.53 E-value=12 Score=34.51 Aligned_cols=24 Identities=17% Similarity=0.344 Sum_probs=21.8
Q ss_pred cEEEeccCcEEEeCCCCceEEeeC
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAE 166 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~ 166 (300)
.+.+|++||.+|+|++-.|..+|.
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~l 263 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVISE 263 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEES
T ss_pred EEEEECCCCEEEECCCCeEEEeeC
Confidence 357899999999999999999994
No 354
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=74.81 E-value=11 Score=31.21 Aligned_cols=69 Identities=9% Similarity=0.077 Sum_probs=45.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEE----eC-CCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LP-PNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~y----fp-a~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+= +. ....++....++++++.+.+
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~ 109 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDR 109 (227)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEeH
Confidence 45567775443334556889999999999875 24554 3788999873 22 22344555677888888854
No 355
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=74.66 E-value=17 Score=31.32 Aligned_cols=58 Identities=10% Similarity=0.196 Sum_probs=41.4
Q ss_pred cCCcccCcceee---ccceEEEEEEeeE-EEEeC--------CEEEEc--c--CCcEEEeCCCCceeEEecCCc
Q 022278 228 QPGDFLNVKEVH---YNQHGLLLLEGQG-IYRLG--------DSWYPV--Q--AGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 228 ~PG~~~p~~~~H---~~eh~~~iL~G~G-~~~~~--------g~~~~v--~--~GD~i~~~~~~~H~~~n~G~e 285 (300)
.+|.-=+.|-+. .+..-..+++|+. .+.+| |+|..+ . .+-.+|+|+|+-|+|.+.+++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~ 125 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD 125 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC
Confidence 678776764443 4567789999995 33344 355543 3 467999999999999999874
No 356
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=74.64 E-value=4.9 Score=31.50 Aligned_cols=48 Identities=13% Similarity=0.250 Sum_probs=37.9
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEE-EEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSW-YPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~-~~v~~GD~i 269 (300)
.+...++++|..+= .+-....+.|+|++|...+..+|+. ..+.+||++
T Consensus 60 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~f 108 (154)
T 3pna_A 60 AMFPVSFIAGETVI-QQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSF 108 (154)
T ss_dssp HCEEEEECTTCEEE-CTTSCCCEEEEEEESCEEEEETTEEEEEECTTCEE
T ss_pred hceEEEECCCCEEE-eCCCCCCeEEEEEecEEEEEECCEEEEEecCCCEe
Confidence 46678899999884 3555667889999999999988754 558899985
No 357
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=74.47 E-value=3.2 Score=31.59 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=44.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEEEeC----C-CCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYTYLP----P-NFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~yfp----a-~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+ ...+.+||.+=.. . ....+....++++++.+.+
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~-~~-~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~ 107 (138)
T 1vp6_A 36 ARTVPAGAVICRIGEPGDRMFFVVEGSVSVAT-PN-PVELGPGAFFGEMALISGEPRSATVSAATTVSLLSLHS 107 (138)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESCEEECS-SS-CEEECTTCEECHHHHHHCCCCSSCEEESSSEEEEEEEH
T ss_pred EEEeCCCCEEEeCCCCcceEEEEEeeEEEEEe-CC-cceECCCCEeeehHhccCCCceeEEEECCCEEEEEECH
Confidence 45667775443334456789999999999986 55 5689999986321 1 2234455567788888754
No 358
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=74.45 E-value=6 Score=34.66 Aligned_cols=151 Identities=9% Similarity=0.088 Sum_probs=85.5
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeCC---CC--ceEEeeCCeEEEEEEEeec-cc
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP---NF--AHSLRAEGSATLVVFERRY-AS 180 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfpa---~~--~H~~~N~~~a~vl~v~~~y-~~ 180 (300)
..++++|..--.....++.|++|++|.+.+.. +|+. ..+.+||++=--+ +. ..++...++++++.+.+.- ..
T Consensus 64 ~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~g~~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~~~ 142 (299)
T 3shr_A 64 PVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK-EGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQT 142 (299)
T ss_dssp EEEECTTCEEECTTCBCCCEEEEEESCEEEEE-TTEEEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEEEECHHHHHH
T ss_pred eEEECCCCEEEcCCCcCceEEEEEEEEEEEEE-CCEEEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHHHH
Confidence 35566765433334567899999999999988 6654 6899999875222 22 3455556778887774322 11
Q ss_pred cCCCCcc----eeeccCCCCCCcccCCceeEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEE
Q 022278 181 LENHITE----QIVGSTDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR 255 (300)
Q Consensus 181 ~~g~~p~----~~~~~~~d~~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~ 255 (300)
.-...|. ....-...++.-. .+.+.+.. ....+...++++|..+= .+-..-...|+|++|+..+.
T Consensus 143 i~~~~~~~~~~~~~~~l~~~~~f~---------~l~~~~l~~l~~~~~~~~~~~g~~I~-~~G~~~~~~yiI~~G~v~~~ 212 (299)
T 3shr_A 143 IMMRTGLIKHTEYMEFLKSVPTFQ---------SLPEEILSKLADVLEETHYENGEYII-RQGARGDTFFIISKGKVNVT 212 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTSHHHH---------HSCHHHHHHHTTTCEEEEECTTCEEE-CTTCEECEEEEEEESEEEEE
T ss_pred HhhHhHHHHHHHHHHHHhhCHHhh---------hCCHHHHHHHHHhccEEEECCCCEEE-eCCCCCCEEEEEEeeEEEEE
Confidence 0000010 0000011111000 01111111 12234677788998873 34445557899999999988
Q ss_pred eCC-------EEEEccCCcEE
Q 022278 256 LGD-------SWYPVQAGDVL 269 (300)
Q Consensus 256 ~~g-------~~~~v~~GD~i 269 (300)
..+ ....+.+||++
T Consensus 213 ~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 213 REDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp ECCSSSCCCEEEEEEETTCEE
T ss_pred EecCCCCcceEEEEcCCCCEe
Confidence 654 45678999986
No 359
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=74.20 E-value=9.9 Score=31.47 Aligned_cols=68 Identities=10% Similarity=-0.007 Sum_probs=45.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeCC---CC--c--eEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP---NF--A--HSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfpa---~~--~--H~~~N~~~a~vl~v~~ 176 (300)
...+.||..--........+++|++|.+.+.. +|.. ..+.+||++=..+ +. + .+++..+.++++.+.+
T Consensus 100 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i~~ 175 (212)
T 3ukn_A 100 TSFCAPGEFLIRQGDALQAIYFVCSGSMEVLK-DNTVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISL 175 (212)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECCEEEES-SSCEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEEEH
T ss_pred eEEeCCCCEEEECCCcccEEEEEEecEEEEEE-CCeEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEEeH
Confidence 34567775443233457899999999999997 6654 6899999885322 22 2 3344567788888754
No 360
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=73.33 E-value=7.7 Score=29.37 Aligned_cols=49 Identities=24% Similarity=0.234 Sum_probs=35.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCE------EEEccCCcEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS------WYPVQAGDVLW 270 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~------~~~v~~GD~i~ 270 (300)
.++..++++|..+- .+.....+.|+|++|...+.. +|+ ...+.+||++=
T Consensus 28 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 28 ISEEKSFPTGSVIF-KENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp TEEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hhcEEecCCCCEEE-eCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 36788899999884 355556688999999999874 333 45579999864
No 361
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=73.13 E-value=9.4 Score=29.31 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=43.2
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CCcE---EEeccCcEEEe----CC-C-CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNA--SGVS---SKLMVDSYTYL----PP-N-FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg~~---~~L~~Gds~yf----pa-~-~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+... +|++ ..+.+||++=. .. . ..+++...++++++.+.+
T Consensus 37 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 116 (154)
T 2z69_A 37 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 116 (154)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSEEEEEEEH
T ss_pred EEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccceEEEEECH
Confidence 455667654433344567899999999999741 3443 57889998732 22 2 345555677888888854
No 362
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=71.94 E-value=5.9 Score=32.50 Aligned_cols=69 Identities=20% Similarity=0.171 Sum_probs=44.8
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCc-EEEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV-SSKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~-~~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
...+.||..--......+.+++|++|++.+...+|+ ...+.+||++=. ......+.+..+.++++.+.+
T Consensus 96 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~~ 170 (198)
T 2ptm_A 96 FEVFQPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSLSV 170 (198)
T ss_dssp EEEECTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEEH
T ss_pred ceeeCCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEEeH
Confidence 445667754433334567899999999999863454 468999997621 122344555567788887753
No 363
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=70.89 E-value=8.2 Score=31.55 Aligned_cols=49 Identities=12% Similarity=0.084 Sum_probs=36.7
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEE---eCCEE---EEccCCcEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR---LGDSW---YPVQAGDVLW 270 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~---~~g~~---~~v~~GD~i~ 270 (300)
.++..++++|..+- .+-....+.|+|++|...+. -+|++ ..+.+||++-
T Consensus 18 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 18 HCHIHKYPSKSTLI-HQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp TSEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred hcEEEEeCCCCEEE-CCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 35678889999874 35556678999999999887 35654 4469999873
No 364
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=70.69 E-value=4.2 Score=33.65 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=46.1
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe-CCEEEEccCCcEEE-----eCCCCceeEEecCCccEEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GDSWYPVQAGDVLW-----MAPFVPQWYAALGKTRTRYL 290 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~-~g~~~~v~~GD~i~-----~~~~~~H~~~n~G~e~~~fi 290 (300)
.++...+.||..+= .+-....+.|+|++|...+.. +|+...+.+||++= ...--+..+.+.++..+-.|
T Consensus 94 ~~~~~~~~~ge~I~-~~g~~~~~ly~I~~G~v~v~~~~g~~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 94 KLKFEVFQPGDYII-REGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCEEEEEEECEEEEECTTSCCEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred hCCceEECCCCEEE-ECCCcCCeEEEEeccEEEEEECCCeEEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 46788899999884 344555678999999998864 55777899999862 11122345666555444333
No 365
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=70.40 E-value=5.6 Score=30.41 Aligned_cols=48 Identities=15% Similarity=0.126 Sum_probs=36.0
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i 269 (300)
.+...++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 27 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 27 SMSEVTLARGDTLF-HEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELI 80 (149)
T ss_dssp HCEEEEECTTCEEE-CTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEE
T ss_pred hceEEEeCCCCEEE-CCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEe
Confidence 35688899999884 345556678999999998774 4654 467799986
No 366
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=70.31 E-value=7.4 Score=29.71 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=37.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCE-EEEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-WYPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~-~~~v~~GD~i 269 (300)
.+...++++|..+= .+-....+.|+|++|...+..+|+ ...+.+||++
T Consensus 45 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~g~~~~~~~~G~~f 93 (139)
T 3ocp_A 45 CMYPVEYGKDSCII-KEGDVGSLVYVMEDGKVEVTKEGVKLCTMGPGKVF 93 (139)
T ss_dssp HCEEEEECSSCEEE-CTTSCCCEEEEEEECCEEEEETTEEEEEECTTCEE
T ss_pred hcEEEecCCCCEEE-eCCCcCCEEEEEEeCEEEEEECCEEEEEeCCCCEe
Confidence 45778889999874 355566688999999999988875 4567899975
No 367
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=70.20 E-value=8.4 Score=31.41 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=41.6
Q ss_pred EEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe--CCC--CceEEeeCCeEEEEEEEe
Q 022278 110 NMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL--PPN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 110 ~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf--pa~--~~H~~~N~~~a~vl~v~~ 176 (300)
++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. -.+ ..++....++++++.+.+
T Consensus 3 ~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~~ 78 (195)
T 3b02_A 3 RFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLEP 78 (195)
T ss_dssp EECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEECG
T ss_pred EcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEcH
Confidence 345554332223455779999999999875 24554 47789998743 112 233444567888888843
No 368
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=69.64 E-value=14 Score=30.25 Aligned_cols=69 Identities=13% Similarity=-0.022 Sum_probs=45.5
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. .....++....++++++.+.+
T Consensus 24 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~ 102 (216)
T 4ev0_A 24 RRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLALFR 102 (216)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEEEH
T ss_pred EEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEEcH
Confidence 45567775443334456899999999999975 24554 57889998732 122344555577888888854
No 369
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=69.39 E-value=12 Score=31.32 Aligned_cols=69 Identities=10% Similarity=0.168 Sum_probs=45.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEE----eCCC--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LPPN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~y----fpa~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+= +... ...+....++++++.+.+
T Consensus 45 ~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 124 (232)
T 1zyb_A 45 FIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVCISK 124 (232)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEEEEH
Confidence 45567775443334456889999999999874 23443 4678999873 2222 345555677889988864
No 370
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=69.26 E-value=0.45 Score=33.86 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=30.8
Q ss_pred ccCCcccccccCCCCcceeeecCCCCChh--h------hhcccCCcceee
Q 022278 26 FCSAPSILDRETSSKPMYWKVTNPTLSPS--H------LQDLPGFTRSVY 67 (300)
Q Consensus 26 ~~~~~~~a~r~~lsk~~~Sqver~~~sps--~------I~~~lg~trs~f 67 (300)
..|+.+||+++|+|++-+|.+.||....| . +++-||..+...
T Consensus 9 ~~t~~diA~~aGVS~sTVSr~ln~~~~vs~~t~~rV~~~a~~lgY~pn~~ 58 (67)
T 2l8n_A 9 AATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPM 58 (67)
T ss_dssp CCCHHHHHHHTTCCHHHHHHTTTCCCCSCHHHHHHHHHHHHHHCCCC---
T ss_pred CCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHHHHhCCCccHH
Confidence 46899999999999999999999875433 3 455567655443
No 371
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=69.02 E-value=17 Score=30.09 Aligned_cols=69 Identities=10% Similarity=0.069 Sum_probs=45.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe----CCC--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL----PPN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf----pa~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. ..+ ....+...++++++.+.+
T Consensus 36 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 115 (230)
T 3iwz_A 36 RRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQCELAEISY 115 (230)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCEEEEEEEH
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcEEEEEEeH
Confidence 45567775443334556899999999999875 24554 46889998843 222 233444577888888854
No 372
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=68.73 E-value=5.7 Score=32.60 Aligned_cols=68 Identities=16% Similarity=0.079 Sum_probs=43.7
Q ss_pred EEEEEecCCcccCcceeecc--ceEEEEEEeeEEEEe---CCEEE---EccCCcEEEe----CCCCceeEEecCCccEEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYN--QHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWM----APFVPQWYAALGKTRTRY 289 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~--eh~~~iL~G~G~~~~---~g~~~---~v~~GD~i~~----~~~~~H~~~n~G~e~~~f 289 (300)
++..++++|..+- .+-... .+.|+|++|...+.. +|+.. .+.+||++-. ..-.+..+.+..+..+-.
T Consensus 5 ~~~~~~~~g~~i~-~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~ 83 (202)
T 2zcw_A 5 RETVSFKAGDVIL-YPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEP 83 (202)
T ss_dssp -CCEEECTTCEEE-CSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEE
T ss_pred ceEEEECCCCEEE-CCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEE
Confidence 4466788998874 345555 778999999998763 56554 5789998632 222344566665555444
Q ss_pred E
Q 022278 290 L 290 (300)
Q Consensus 290 i 290 (300)
|
T Consensus 84 i 84 (202)
T 2zcw_A 84 L 84 (202)
T ss_dssp C
T ss_pred E
Confidence 4
No 373
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=68.71 E-value=17 Score=29.42 Aligned_cols=70 Identities=11% Similarity=0.103 Sum_probs=44.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC----C-----CceEEeeCCeEEEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP----N-----FAHSLRAEGSATLVV 173 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa----~-----~~H~~~N~~~a~vl~ 173 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||++=..+ . ..+++...++++++.
T Consensus 15 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~~v~~ 94 (207)
T 2oz6_A 15 RRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAE 94 (207)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCEEEEE
T ss_pred eEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcEEEEE
Confidence 44566775443333456789999999999975 23554 4678999874321 1 234444567888888
Q ss_pred EEee
Q 022278 174 FERR 177 (300)
Q Consensus 174 v~~~ 177 (300)
+.+.
T Consensus 95 i~~~ 98 (207)
T 2oz6_A 95 ISYA 98 (207)
T ss_dssp EEHH
T ss_pred ECHH
Confidence 8543
No 374
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=68.47 E-value=2.9 Score=39.04 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.4
Q ss_pred EEccCCcEEEeCCCCceeEEecCC
Q 022278 261 YPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 261 ~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..=+|||+|++.||+-||..|.|-
T Consensus 281 ~~QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 281 FVQRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecce
Confidence 334799999999999999999996
No 375
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=68.45 E-value=10 Score=29.06 Aligned_cols=48 Identities=6% Similarity=0.054 Sum_probs=34.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i 269 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 34 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 34 SSDLVNLDKGAYVF-RQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp TCEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred hCcEEEecCCCEEe-cCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 36788899999884 355566689999999998874 4554 467899986
No 376
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=68.35 E-value=5.4 Score=37.89 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=21.6
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCC
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEG 167 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~ 167 (300)
=++.-++||.+++|||.+|+++|-.
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~ 317 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFH 317 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESS
T ss_pred EEEEEcCCCEEEecCCCHHHHhccc
Confidence 4567799999999999999999943
No 377
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=67.94 E-value=4.9 Score=30.95 Aligned_cols=49 Identities=20% Similarity=0.359 Sum_probs=37.6
Q ss_pred eEEEEEEeeEEEEeCCEEEE--ccCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 243 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 243 h~~~iL~G~G~~~~~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
.+--+==|.|....||+..| |+.||.+..+.|-...++--|+ +|+++++
T Consensus 42 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dge---eyli~re 92 (100)
T 1we3_O 42 KGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGE---EYVILSE 92 (100)
T ss_dssp EEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSC---EEEEECT
T ss_pred CCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCE---EEEEEEh
Confidence 45566678888878888875 9999999999998888875443 4776654
No 378
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=67.85 E-value=14 Score=30.35 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=44.5
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe-----CCC--CceEEeeCCeEEEEEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPN--FAHSLRAEGSATLVVFE 175 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf-----pa~--~~H~~~N~~~a~vl~v~ 175 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+-| -.+ ...+....++++++.+.
T Consensus 28 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (220)
T 3dv8_A 28 TQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWIIP 107 (220)
T ss_dssp EEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEEE
T ss_pred eEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEEE
Confidence 45566665432223456789999999999875 24554 46679999632 122 33344457788988885
Q ss_pred ee
Q 022278 176 RR 177 (300)
Q Consensus 176 ~~ 177 (300)
+.
T Consensus 108 ~~ 109 (220)
T 3dv8_A 108 AE 109 (220)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 379
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=67.68 E-value=12 Score=30.91 Aligned_cols=69 Identities=7% Similarity=0.192 Sum_probs=45.8
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEE----eCCC--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTY----LPPN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~y----fpa~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+= +..+ ..++....++++++.+.+
T Consensus 24 ~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 103 (213)
T 1o5l_A 24 VIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSKILSIPK 103 (213)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEEEEEEEH
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceEEEEEeH
Confidence 55667776543334556889999999999874 24555 4678999773 2222 344555577899988854
No 380
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=67.65 E-value=15 Score=31.53 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=46.1
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC----C--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP----N--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa----~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||++=..+ . ...++...++++++.+.+
T Consensus 71 ~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i~~ 150 (260)
T 3kcc_A 71 IHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 150 (260)
T ss_dssp EEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEEcH
Confidence 45567775543334556899999999999975 24554 5678999884322 2 234455577888888854
Q ss_pred e
Q 022278 177 R 177 (300)
Q Consensus 177 ~ 177 (300)
.
T Consensus 151 ~ 151 (260)
T 3kcc_A 151 K 151 (260)
T ss_dssp H
T ss_pred H
Confidence 3
No 381
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=67.56 E-value=3.9 Score=38.06 Aligned_cols=26 Identities=8% Similarity=-0.083 Sum_probs=23.5
Q ss_pred EEEEccCCcEEEeCCCCceeEEecCC
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
-...++|||++|+|+|-.|+..|.++
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 45679999999999999999999975
No 382
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=67.49 E-value=21 Score=29.73 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=45.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEee
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~~ 177 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. ......+....++++++.+.+.
T Consensus 36 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~ 115 (237)
T 3fx3_A 36 WRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPSP 115 (237)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSEEEEEEEHH
T ss_pred EEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCceEEEEEcHH
Confidence 45566765443334556799999999999976 24554 46789998732 1223445555778888888543
No 383
>2auw_A Hypothetical protein NE0471; alpha-beta structure, structural genomics, PSI, protein STRU initiative; 1.85A {Nitrosomonas europaea} SCOP: a.35.1.10 d.331.1.1
Probab=67.48 E-value=0.44 Score=40.41 Aligned_cols=28 Identities=11% Similarity=-0.111 Sum_probs=25.0
Q ss_pred cCCcccccccCCCCcceeeecCCCCChh
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPS 54 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps 54 (300)
-||.++|++.|+|+..||+.|+|...|+
T Consensus 104 lTQ~elA~~LGvsr~tis~yE~G~r~iP 131 (170)
T 2auw_A 104 LSLTTAAEALGISRRMVSYYRTAHKIIP 131 (170)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHTTSSCCC
T ss_pred CCHHHHHHHhCCCHHHHHHHHcCCCCCC
Confidence 4889999999999999999999987444
No 384
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=67.20 E-value=9.9 Score=28.92 Aligned_cols=69 Identities=10% Similarity=0.022 Sum_probs=43.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC---C--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP---N--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa---~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||++=..+ + ...++...++++++.+.+
T Consensus 30 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~ 108 (149)
T 2pqq_A 30 EVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALGH 108 (149)
T ss_dssp EEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEEG
T ss_pred EEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEeH
Confidence 55667775443333456789999999999875 23554 4788999763221 2 223344467788888754
No 385
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=66.79 E-value=10 Score=31.14 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=35.3
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 269 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i 269 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 26 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 78 (220)
T 3dv8_A 26 LITQHVKKGTIIH-NGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMC 78 (220)
T ss_dssp CEEEEECTTCEEE-EGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEE
T ss_pred CceEEeCCCCEEE-CCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCee
Confidence 4678889999884 344556689999999998773 5654 456799996
No 386
>2h8r_A Hepatocyte nuclear factor 1-beta; trasncription factor, POU, homeo, protein-DNA, human disease; 3.20A {Homo sapiens}
Probab=66.53 E-value=0.48 Score=41.79 Aligned_cols=28 Identities=7% Similarity=-0.021 Sum_probs=23.4
Q ss_pred cCCcccccccCCCCcceeeecCCCCChh
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPS 54 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps 54 (300)
.|+.+||+.+|+|++.|||+||+-+..+
T Consensus 45 ltQ~evA~~tGISqS~ISq~e~~g~~~t 72 (221)
T 2h8r_A 45 IPQREVVDVTGLNQSHLSQHLNKGTPMK 72 (221)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHhCCCHHHHHHHHhCCCchh
Confidence 4678899999999999999999654444
No 387
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=66.18 E-value=6.2 Score=36.56 Aligned_cols=152 Identities=13% Similarity=0.048 Sum_probs=86.2
Q ss_pred EEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcE-EEeccCcEEEeCC---CC--ceEEeeCCeEEEEEEEeec-c
Q 022278 107 YLANMQENARSALPPHDVERFIFVVQGSAMLTNASGVS-SKLMVDSYTYLPP---NF--AHSLRAEGSATLVVFERRY-A 179 (300)
Q Consensus 107 ~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~-~~L~~Gds~yfpa---~~--~H~~~N~~~a~vl~v~~~y-~ 179 (300)
...++++|..--.....++.|++|++|.+.+.. +|+. ..+.+||++=--+ +. ..++...++++++.+.+.- .
T Consensus 154 ~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~-~~~~v~~l~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~~~~f~ 232 (381)
T 4din_B 154 FPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV-NGEWVTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYR 232 (381)
T ss_dssp EEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE-TTEEEEEEESSCCBCGGGGTSCCBCSSEEEESSSCEEEEEEHHHHH
T ss_pred eEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE-CCeEeeeCCCCCEEEchHHhcCCCcceEEEECCCEEEEEEchHHHH
Confidence 456778886554445678999999999999998 6654 6899999864211 22 3445556677777774322 1
Q ss_pred ccCCCCcce----eeccCCCCCCcccCCceeEEEEeeCCCCC-cceEEEEEEecCCcccCcceeeccceEEEEEEeeEEE
Q 022278 180 SLENHITEQ----IVGSTDKQPLLETPGEVFQLRKLLPQAVP-FDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIY 254 (300)
Q Consensus 180 ~~~g~~p~~----~~~~~~d~~~~~~~g~~~~~~~l~p~~~~-~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~ 254 (300)
.+-...|.. +..-...++... . |.+.+.. ....+....+++|..+= .+-..-.+.|+|++|+..+
T Consensus 233 ~ll~~~~~~~~~~~~~~L~~v~~f~--~-------Ls~~el~~l~~~~~~~~~~~ge~I~-~eGd~~~~~yiI~~G~v~v 302 (381)
T 4din_B 233 RILMGSTLRKRKMYEEFLSKVSILE--S-------LEKWERLTVADALEPVQFEDGEKIV-VQGEPGDDFYIITEGTASV 302 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSTTT--T-------CCTTHHHHHHTTCBCCCBCSSCBSS-CTTSBCCEEEEEEESCEEE
T ss_pred HhhhhhhHHHHHHHHHHhhhhHHHH--h-------ccHHHHHHHHHhhhhccCCCCCEEE-eCCCcCCEEEEEEeCEEEE
Confidence 100000110 000000011000 0 0011100 11234456678888874 3555566789999999999
Q ss_pred EeC---C----EEEEccCCcEE
Q 022278 255 RLG---D----SWYPVQAGDVL 269 (300)
Q Consensus 255 ~~~---g----~~~~v~~GD~i 269 (300)
... | ....+.+||++
T Consensus 303 ~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 303 LQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp ECCSSSSSCCCEEEEECTTCEE
T ss_pred EEecCCCCceEEEEEeCCCCEe
Confidence 864 2 35678999986
No 388
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=65.83 E-value=24 Score=29.12 Aligned_cols=64 Identities=9% Similarity=0.025 Sum_probs=44.7
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEE--eCCEEE---EccCCcEEEeCCCCceeEEecCCccE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSWY---PVQAGDVLWMAPFVPQWYAALGKTRT 287 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~--~~g~~~---~v~~GD~i~~~~~~~H~~~n~G~e~~ 287 (300)
.+...++++|..+- .+-....+.|+|++|...+. .+|+.. .+.+||++- .-.+..+.+..+..+
T Consensus 22 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~~v 90 (222)
T 1ft9_A 22 GFRSKIHAKGSLVC-TGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERTEV 90 (222)
T ss_dssp TCEEEEECTTCEEE-CTTCCCCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCEEE
T ss_pred hCcEEEECCCCEEE-CCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccceEE
Confidence 36788899999884 35556678999999999875 467654 568999877 333556666544333
No 389
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=65.58 E-value=34 Score=26.57 Aligned_cols=69 Identities=14% Similarity=0.081 Sum_probs=42.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE-cCCcE---EEeccCcEEEe---CCCCc--eEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN-ASGVS---SKLMVDSYTYL---PPNFA--HSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v-~gg~~---~~L~~Gds~yf---pa~~~--H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|+. ..+.+||++=. -.+.+ .++...++++++.+.+
T Consensus 63 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~ 140 (161)
T 3idb_B 63 EKLVKEGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDR 140 (161)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEEEH
T ss_pred eeEeCCCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEEeH
Confidence 35566665443334567899999999999965 24544 35788996532 11333 3344467788877743
No 390
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=64.73 E-value=25 Score=29.11 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=44.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC---CCc--eEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa---~~~--H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=..+ +.+ .++...++++++.+.+
T Consensus 31 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~ 109 (231)
T 3e97_A 31 ERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTLMLHR 109 (231)
T ss_dssp EEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCEEEEEECH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcEEEEEEeH
Confidence 55677876554334567889999999999875 24444 5788999874221 223 3344467888888743
No 391
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=64.70 E-value=6.5 Score=29.97 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=38.4
Q ss_pred eEEEEEEeeEEEEeCCEEEE--ccCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 243 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 243 h~~~iL~G~G~~~~~g~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
++--+==|.|....||+..| |+.||.+..+.|-...++--| + +|+++++
T Consensus 37 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg-~--ey~i~re 87 (95)
T 3nx6_A 37 KGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEG-V--EYKVLRE 87 (95)
T ss_dssp EEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETT-E--EEEEEEG
T ss_pred ccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECC-E--EEEEEEH
Confidence 46677789999999998775 999999999999888877533 3 4666654
No 392
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=64.10 E-value=12 Score=28.92 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=38.5
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCE-EEEccCCcEEEe
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS-WYPVQAGDVLWM 271 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~-~~~v~~GD~i~~ 271 (300)
.++..++++|..+- .+-....+.|+|++|...+..++. ...+.+||++--
T Consensus 49 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 49 EFQTVHCAPGDLIY-HAGESVDSLCFVVSGSLEVIQDDEVVAILGKGDVFGD 99 (160)
T ss_dssp TCEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEETTEEEEEEETTCEEEC
T ss_pred hceeeeeCCCCEEE-eCCCCccEEEEEEeeEEEEEECCEEEEEecCCCEeCc
Confidence 45678889999874 345556689999999999887664 567899998764
No 393
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=63.55 E-value=9.8 Score=31.52 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=39.5
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC-EEEEccCCcEEEe
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-SWYPVQAGDVLWM 271 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g-~~~~v~~GD~i~~ 271 (300)
..+....+.||..+= .+-....+.|+|++|...+..+| ....+.+||++--
T Consensus 96 ~~~~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~v~~~~~~~~~l~~G~~fGe 147 (212)
T 3ukn_A 96 LIIKTSFCAPGEFLI-RQGDALQAIYFVCSGSMEVLKDNTVLAILGKGDLIGS 147 (212)
T ss_dssp HHCEEEEECTTCEEE-CTTSBCCEEEEEEECCEEEESSSCEEEEECTTCEEEC
T ss_pred HHhheEEeCCCCEEE-ECCCcccEEEEEEecEEEEEECCeEEEEecCCCCcCc
Confidence 356778899999884 34555668899999999998776 4567899998753
No 394
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=63.04 E-value=9.8 Score=31.14 Aligned_cols=68 Identities=10% Similarity=0.026 Sum_probs=45.0
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe-CC-EEEEccCCcEEE-----eCCCCceeEEecCCccEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL-GD-SWYPVQAGDVLW-----MAPFVPQWYAALGKTRTRY 289 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~-~g-~~~~v~~GD~i~-----~~~~~~H~~~n~G~e~~~f 289 (300)
.++...+.||..+= .+-....+.|+|++|...+.. +| ....+.+||++= ...--+..+.+.++..+-.
T Consensus 93 ~~~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~ 167 (198)
T 2ptm_A 93 LLEFEVFQPADYVI-QEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYCTLFS 167 (198)
T ss_dssp HCEEEEECTTCEEE-CTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEE
T ss_pred hccceeeCCCCEEE-ECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEEEEEE
Confidence 46788899999884 344555678999999999884 44 467889999752 1122234556655544433
No 395
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=62.56 E-value=5.7 Score=38.51 Aligned_cols=29 Identities=7% Similarity=-0.136 Sum_probs=24.9
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCCc
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGKT 285 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~e 285 (300)
......++|||++|||+|-.|+..|..++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nleds 292 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTDT 292 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSCE
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCCe
Confidence 35577899999999999999999998643
No 396
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=61.60 E-value=17 Score=29.44 Aligned_cols=48 Identities=8% Similarity=0.049 Sum_probs=35.4
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 270 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~ 270 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-
T Consensus 13 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 13 CHRRRYTAKSTII-YAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp SEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred cceEEECCCCEEE-cCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 4677889999873 345556688999999998762 4554 4567999873
No 397
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=61.45 E-value=16 Score=30.50 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=44.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC--cEEEeccCcEEEeCC---CCc--eEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg--~~~~L~~Gds~yfpa---~~~--H~~~N~~~a~vl~v~~ 176 (300)
...+.+|..--.....++.+++|++|++.+.. .+ ....+.+||++=--+ +.+ .++...++++++.+.+
T Consensus 150 ~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~-~~~~~~~~l~~g~~fGe~~~~~~~~~~~~v~a~~~~~~~~i~~ 224 (246)
T 3of1_A 150 TKIYQPGETIIREGDQGENFYLIEYGAVDVSK-KGQGVINKLKDHDYFGEVALLNDLPRQATVTATKRTKVATLGK 224 (246)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEECEEEEEE-TTTEEEEEEETTCEECHHHHHHTCBCSSEEEESSCEEEEEEEH
T ss_pred eEEeCCCCEEEeCCCcCCEEEEEEecEEEEEE-cCCceEEEcCCCCcccHHHHhCCCCcccEEEECCCEEEEEEeH
Confidence 34557775443334567899999999999998 54 357899999773110 222 3344466788877744
No 398
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=61.39 E-value=15 Score=30.41 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=44.1
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEEE---EccCCcEEEe-----CCCCceeEEecCCccEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWM-----APFVPQWYAALGKTRTRY 289 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~~---~v~~GD~i~~-----~~~~~H~~~n~G~e~~~f 289 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+.. .+.+||++-- ..-.+..+.+..+..+-.
T Consensus 28 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~ 106 (227)
T 3d0s_A 28 QLQPVDFPRGHTVF-AEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVS 106 (227)
T ss_dssp TSCEEEECTTCEEE-CTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEE
T ss_pred hCeEEEeCCCCEEE-cCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEE
Confidence 34678889999884 345556678999999998774 56554 6789998631 122334566655443333
No 399
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=60.88 E-value=24 Score=29.84 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=44.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe--CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL--PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf--pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. ......+....++++++.+.+
T Consensus 34 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~~v~~i~~ 109 (250)
T 3e6c_C 34 IRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPTRTCWFSE 109 (250)
T ss_dssp EEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSEEEEEECH
T ss_pred EEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccEEEEEEcH
Confidence 44566765443333456789999999999875 34555 45789998742 222344444577888888844
No 400
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=60.44 E-value=3.8 Score=31.23 Aligned_cols=55 Identities=16% Similarity=0.276 Sum_probs=36.9
Q ss_pred CCceEEEEEEECEEEEEE-cCCcE---E--EeccCcEEE-------eCCCC-------ceEEeeCCeEEEEEEEe
Q 022278 122 HDVERFIFVVQGSAMLTN-ASGVS---S--KLMVDSYTY-------LPPNF-------AHSLRAEGSATLVVFER 176 (300)
Q Consensus 122 h~gEEf~yVLeG~v~l~v-~gg~~---~--~L~~Gds~y-------fpa~~-------~H~~~N~~~a~vl~v~~ 176 (300)
...+.+++|++|.+.+.. .+|++ . .+.+||.+= +.... ..+....++++++.+.+
T Consensus 45 ~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i~~ 119 (137)
T 1wgp_A 45 DPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIA 119 (137)
T ss_dssp SBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEH
T ss_pred CCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecHHHHHHHhccccccccccceeEEEEeEEEEEEEECH
Confidence 345789999999999764 23444 3 888999762 33321 34566677788887753
No 401
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=60.14 E-value=13 Score=30.03 Aligned_cols=67 Identities=7% Similarity=-0.073 Sum_probs=44.0
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEEE---EccCCcEEE-eC---CCCc--eeEEecCCccEEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLW-MA---PFVP--QWYAALGKTRTRY 289 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~~---~v~~GD~i~-~~---~~~~--H~~~n~G~e~~~f 289 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+.. -+.+||++- +. .+.+ ..+.+..+..+-.
T Consensus 30 ~~~~~~~~g~~l~-~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~ 108 (194)
T 3dn7_A 30 FQLKKVRKKETLL-KTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLS 108 (194)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEE
T ss_pred CEEEEEcCCCEEE-CCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEE
Confidence 4678889999884 345556689999999998763 56554 468999975 31 2333 3555554444333
No 402
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=59.92 E-value=14 Score=30.46 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=44.9
Q ss_pred ceEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEEE---EccCCcEEEeC----C--CCceeEEecCCcc
Q 022278 219 DFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLWMA----P--FVPQWYAALGKTR 286 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~~---~v~~GD~i~~~----~--~~~H~~~n~G~e~ 286 (300)
.-.++..++++|..+- .+-....+.|+|++|...+.. +|+.. .+.+||++--. . -.+..+.+..+..
T Consensus 19 ~~~~~~~~~~~g~~i~-~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~~ 97 (213)
T 1o5l_A 19 LPCGKVIVFRKGEIVK-HQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENSK 97 (213)
T ss_dssp GGGSEEEEECTTCEEE-CTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSEE
T ss_pred hcccEEEEECCCCEEE-cCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccceE
Confidence 3456788899999884 345556688999999998763 56554 57899986321 1 2334566655443
Q ss_pred EE
Q 022278 287 TR 288 (300)
Q Consensus 287 ~~ 288 (300)
+-
T Consensus 98 v~ 99 (213)
T 1o5l_A 98 IL 99 (213)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 403
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=59.53 E-value=6.5 Score=36.48 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=21.3
Q ss_pred EEEeccCcEEEeCCCCceEEeeC
Q 022278 144 SSKLMVDSYTYLPPNFAHSLRAE 166 (300)
Q Consensus 144 ~~~L~~Gds~yfpa~~~H~~~N~ 166 (300)
+.+|++||.+|+|++-.|.++|.
T Consensus 262 ~~~l~pGD~LyiP~gWwH~V~~l 284 (349)
T 3d8c_A 262 ETVVGPGDVLYIPMYWWHHIESL 284 (349)
T ss_dssp EEEECTTCEEEECTTCEEEEEEC
T ss_pred EEEECCCCEEEECCCCcEEEEEc
Confidence 57999999999999999999993
No 404
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=59.20 E-value=16 Score=28.52 Aligned_cols=48 Identities=4% Similarity=-0.110 Sum_probs=35.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEE--eCCEEE---EccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSWY---PVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~--~~g~~~---~v~~GD~i 269 (300)
.+...++++|..+= .+-....+.|+|++|...+. .+|+.. .+.+||++
T Consensus 60 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 60 AMFEKLVKEGEHVI-DQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp HCEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEE
T ss_pred hcceeEeCCCCEEE-eCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEe
Confidence 46678899999884 35556668899999999885 455544 46789964
No 405
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=58.75 E-value=5.4 Score=39.21 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.6
Q ss_pred EEccCCcEEEeCCCCceeEEecCC
Q 022278 261 YPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 261 ~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..=+|||++++.||.-||..|.|-
T Consensus 315 ~iQkPGdfVit~PgtyH~Vqs~Gf 338 (510)
T 4ask_A 315 FVQRPGDLVWINAGTVHWVQATGW 338 (510)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecCe
Confidence 445799999999999999999996
No 406
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=58.30 E-value=18 Score=32.14 Aligned_cols=70 Identities=11% Similarity=0.054 Sum_probs=44.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CC--cEEEeccCcEEE----e-CCCCceEEeeCCeEEEEEEEee
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNA--SG--VSSKLMVDSYTY----L-PPNFAHSLRAEGSATLVVFERR 177 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg--~~~~L~~Gds~y----f-pa~~~H~~~N~~~a~vl~v~~~ 177 (300)
..++++|..--.....++.+++|++|.+.+... +| ....+.+||++= + ..-..+++...++++++.+.+.
T Consensus 38 ~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i~~~ 116 (333)
T 4ava_A 38 PLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRG 116 (333)
T ss_dssp EEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEECHH
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEEcHH
Confidence 345566644322234567899999999999751 23 246789999872 1 1223445556778888887544
No 407
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=58.06 E-value=15 Score=31.82 Aligned_cols=48 Identities=10% Similarity=0.103 Sum_probs=37.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCC-EEEEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGD-SWYPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g-~~~~v~~GD~i 269 (300)
.++..++++|..+= .+-....+.|+|++|+..+..+| ....+.+||++
T Consensus 61 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~g~~~~~l~~G~~f 109 (291)
T 2qcs_B 61 AMFPVSFIAGETVI-QQGDEGDNFYVIDQGEMDVYVNNEWATSVGEGGSF 109 (291)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCEEEEEEECCEEEEETTEEEEEECTTCEE
T ss_pred hccEEEECCCCEEE-eCCCCCceEEEEeeeEEEEEECCeEEEEcCCCCcc
Confidence 46788899999883 35555667899999999998877 44678899986
No 408
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=58.00 E-value=12 Score=30.55 Aligned_cols=66 Identities=12% Similarity=-0.022 Sum_probs=43.7
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEEe-----CCCCceeEEecCCccEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM-----APFVPQWYAALGKTRTR 288 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~~-----~~~~~H~~~n~G~e~~~ 288 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|++ ..+.+||++-. ..-.+..+.+..+..+-
T Consensus 22 ~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~ 98 (216)
T 4ev0_A 22 FQRRLYPQGKPIF-YQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELL 98 (216)
T ss_dssp CEEEEECTTCEEE-CTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEE
T ss_pred heEEEeCCCCEEE-eCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEE
Confidence 4678889999874 355566789999999998873 5653 56789998632 11223455565444333
No 409
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=56.95 E-value=6.8 Score=37.02 Aligned_cols=28 Identities=11% Similarity=-0.077 Sum_probs=24.4
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...++|||.+|||+|-.|+..|..+
T Consensus 215 ~~~ev~l~pGEtLfIPsGWwH~V~nled 242 (371)
T 3k3o_A 215 KCYKCSVKQGQTLFIPTGWIHAVLTPVD 242 (371)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEEeCCCCeEEEecCCC
Confidence 4567899999999999999999999744
No 410
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=56.80 E-value=6.8 Score=37.29 Aligned_cols=28 Identities=11% Similarity=-0.153 Sum_probs=24.6
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...++|||.+|||+|-.|+..|..+
T Consensus 242 ~~~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 242 KCYKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEeeCCCceEEEecCCC
Confidence 4567899999999999999999999854
No 411
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=56.65 E-value=6 Score=39.15 Aligned_cols=24 Identities=25% Similarity=0.692 Sum_probs=21.7
Q ss_pred EEccCCcEEEeCCCCceeEEecCC
Q 022278 261 YPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 261 ~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..=+|||+|++.||.-||..|.|-
T Consensus 340 ~vQkpGd~Vi~~PgayH~v~n~G~ 363 (531)
T 3avr_A 340 FIQRPGDLVWINAGTVHWVQAIGW 363 (531)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecce
Confidence 445899999999999999999996
No 412
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=56.55 E-value=32 Score=28.26 Aligned_cols=64 Identities=14% Similarity=0.131 Sum_probs=43.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEE--eCCEE---EEccCCcEEEeCCCCceeEEecCCccE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR--LGDSW---YPVQAGDVLWMAPFVPQWYAALGKTRT 287 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~--~~g~~---~~v~~GD~i~~~~~~~H~~~n~G~e~~ 287 (300)
.++..++++|..+- .+-....+.|+|++|...+. .+|+. ..+.+||++-- -.+..+.+..+..+
T Consensus 26 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A~~~~~v 94 (220)
T 2fmy_A 26 EFREQRYSKKAILY-TPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCT--HTRAFIQAMEDTTI 94 (220)
T ss_dssp GSEEEEECTTCEEE-CTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEES--CSSSEEEESSSEEE
T ss_pred hhheeEeCCCCEEE-CCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCC--ccceEEEEcCcEEE
Confidence 35688899999884 34555668899999999875 35654 46689998765 23455666554433
No 413
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=56.53 E-value=17 Score=29.53 Aligned_cols=66 Identities=12% Similarity=0.030 Sum_probs=41.2
Q ss_pred EEEcCCCcCCCCCCCc--eEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe----CCCCceEEeeCCeEEEEEE
Q 022278 109 ANMQENARSALPPHDV--ERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL----PPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 109 v~l~PG~~~~~~~h~g--EEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf----pa~~~H~~~N~~~a~vl~v 174 (300)
.++++|..--...... +.+++|++|.+.+.. .+|++ ..+.+||.+=. .....++....++++++.+
T Consensus 8 ~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 8 VSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp EEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred EEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 3456664432223445 678999999999875 24554 46889997743 2223344555677888877
No 414
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=56.40 E-value=8.4 Score=32.16 Aligned_cols=68 Identities=13% Similarity=0.019 Sum_probs=43.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCE---EEEccCCcEEEe-----CCCCceeEEecCCccEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS---WYPVQAGDVLWM-----APFVPQWYAALGKTRTRY 289 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~---~~~v~~GD~i~~-----~~~~~H~~~n~G~e~~~f 289 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+ ...+.+||++-. ..-.+..+.+..+..+-.
T Consensus 32 ~~~~~~~~~g~~i~-~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~ 110 (232)
T 2gau_A 32 EIQPFPCKKASTVF-SEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLA 110 (232)
T ss_dssp HCEEEEECTTCEEE-CTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEE
T ss_pred hCeEEEECCCCEEE-eCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEE
Confidence 46788899999884 345556678999999998873 454 357789998622 112344566655444333
No 415
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=55.89 E-value=25 Score=28.23 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=45.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcEE---EeccCcEEE-eC---CC--CceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVSS---KLMVDSYTY-LP---PN--FAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~~---~L~~Gds~y-fp---a~--~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++. .+.+||.+= +. .+ .+......++++++.+.+
T Consensus 32 ~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i~~ 111 (194)
T 3dn7_A 32 LKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSITY 111 (194)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEEEH
T ss_pred EEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEEeH
Confidence 45567775443334556899999999999875 356553 578999885 21 23 334455578888888843
No 416
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=55.81 E-value=17 Score=29.96 Aligned_cols=49 Identities=8% Similarity=-0.050 Sum_probs=36.7
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 270 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~ 270 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-
T Consensus 33 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 33 HSHRRRYPTRTDVF-RPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp TSEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred hCeEEEeCCCCEEE-CCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 35688899999884 345556789999999998774 5554 4578999974
No 417
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=55.78 E-value=20 Score=33.52 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=44.8
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCc--EEEeccCcEEEeCC---C--CceEEeeCC-eEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTYLPP---N--FAHSLRAEG-SATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~--~~~L~~Gds~yfpa---~--~~H~~~N~~-~a~vl~v~~ 176 (300)
..++++|..--.....++.|++|++|++.+.. .++ ...+.+||++=.-+ + ...++...+ +++++.+.+
T Consensus 363 ~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~-~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~~~~~i~~ 438 (469)
T 1o7f_A 363 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK 438 (469)
T ss_dssp EEECSTTCEEECTTSCCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECGGGGTCCSCCSSEEEESSSSEEEEEEEH
T ss_pred eeEecCCCEEEeCCCcCCeEEEEEEeEEEEEE-cCCeeEEEecCCCEEEEehhhcCCCceEEEEEecCCEEEEEEcH
Confidence 34677776543334577899999999999998 554 57899999773221 2 222333444 578777743
No 418
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=55.40 E-value=15 Score=34.04 Aligned_cols=25 Identities=8% Similarity=0.086 Sum_probs=22.2
Q ss_pred EEEeccCcEEEeCCCCceEEeeCCe
Q 022278 144 SSKLMVDSYTYLPPNFAHSLRAEGS 168 (300)
Q Consensus 144 ~~~L~~Gds~yfpa~~~H~~~N~~~ 168 (300)
+.+|++||.+|+|+|-.|.+.|-+.
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEECCCCEEEeCCCCcEEEecCCC
Confidence 5789999999999999999999443
No 419
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=55.33 E-value=52 Score=27.44 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=41.9
Q ss_pred EEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC----CC---ceEEeeC-CeEEEEEEE
Q 022278 109 ANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP----NF---AHSLRAE-GSATLVVFE 175 (300)
Q Consensus 109 v~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa----~~---~H~~~N~-~~a~vl~v~ 175 (300)
.++++|..--......+.+++|++|.+.+.. .+|++ ..+ +||.+=..+ .. ++..... ++++++.+.
T Consensus 21 ~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~~v~~i~ 99 (238)
T 2bgc_A 21 KQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIK 99 (238)
T ss_dssp EEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECSSEEEEEEEE
T ss_pred EEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEEcceEEEEEe
Confidence 3456665432223456889999999999875 24554 345 899875433 22 3555544 578888885
Q ss_pred e
Q 022278 176 R 176 (300)
Q Consensus 176 ~ 176 (300)
+
T Consensus 100 ~ 100 (238)
T 2bgc_A 100 I 100 (238)
T ss_dssp H
T ss_pred H
Confidence 4
No 420
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=55.12 E-value=9.7 Score=36.83 Aligned_cols=28 Identities=11% Similarity=-0.077 Sum_probs=24.6
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...++|||.+|||+|-.|+..|..+
T Consensus 299 ~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 299 KCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred ceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 3457789999999999999999999854
No 421
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=53.93 E-value=22 Score=29.70 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=44.4
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEEe----CCC--CceeEEecCCccEEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM----APF--VPQWYAALGKTRTRY 289 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~~----~~~--~~H~~~n~G~e~~~f 289 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-- ... .+..+.+..+..+-.
T Consensus 43 ~~~~~~~~ge~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~ 121 (232)
T 1zyb_A 43 LHFIKHKAGETII-KSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEVHTVC 121 (232)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCEEEEE
T ss_pred cEEEEECCCCEEE-CCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccceEEEE
Confidence 6788899999884 345556678999999998763 4543 46789998632 121 345666655544433
Q ss_pred E
Q 022278 290 L 290 (300)
Q Consensus 290 i 290 (300)
|
T Consensus 122 i 122 (232)
T 1zyb_A 122 I 122 (232)
T ss_dssp E
T ss_pred E
Confidence 3
No 422
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=53.67 E-value=22 Score=30.96 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=43.3
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcC---Cc---EEEeccCcEEEeCC---CC--ceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNAS---GV---SSKLMVDSYTYLPP---NF--AHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g---g~---~~~L~~Gds~yfpa---~~--~H~~~N~~~a~vl~v~~ 176 (300)
...+.+|..--......+.+++|++|++.+...+ |+ ...+.+||++=--+ +. ..++...++++++.+.+
T Consensus 182 ~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~ 261 (299)
T 3shr_A 182 ETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVIDR 261 (299)
T ss_dssp EEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEEEH
T ss_pred EEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEEeH
Confidence 4556777544333456789999999999998722 22 35789999874221 21 22333467778877754
No 423
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=53.27 E-value=15 Score=29.88 Aligned_cols=45 Identities=16% Similarity=-0.012 Sum_probs=31.6
Q ss_pred EEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEEE---EccCCcEEE
Q 022278 225 MDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSWY---PVQAGDVLW 270 (300)
Q Consensus 225 ~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~~---~v~~GD~i~ 270 (300)
.++++|..+- .+-....+.|+|++|...+.. +|+.. .+.+||++-
T Consensus 2 ~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 2 KRFARKETIY-LRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFG 52 (195)
T ss_dssp EEECTTCEEE-CTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred eEcCCCCEEE-CCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEec
Confidence 3567787763 244455678999999998763 56544 677999863
No 424
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=52.71 E-value=18 Score=30.14 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=35.6
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 269 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i 269 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 34 ~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 34 AVWRSYDRGETLF-LQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp CEEEEECTTCEEE-CTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred CEEEEECCCCEEE-cCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5678889999884 345556689999999998774 5554 456899986
No 425
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=52.22 E-value=17 Score=29.56 Aligned_cols=48 Identities=19% Similarity=0.072 Sum_probs=35.6
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCE---EEEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDS---WYPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~---~~~v~~GD~i 269 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+ ...+.+||++
T Consensus 61 ~~~~~~~~~ge~i~-~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 61 YMQCYAAPRDCQLL-TEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp TCEEEEECTTCEEE-CTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred hcEEEEeCCCCEEE-cCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 46788889999874 345556688999999998764 444 3467899985
No 426
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=51.73 E-value=9 Score=37.47 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=24.3
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...++|||++|||+|-.|+..|..+
T Consensus 334 ~~~~~~l~pGe~lfIPsGWwH~V~nled 361 (488)
T 3kv5_D 334 KCYKCVVKQGHTLFVPTGWIHAVLTSQD 361 (488)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEeeCCCCEEEeCCCceEEeeCCCC
Confidence 3457789999999999999999999854
No 427
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=51.32 E-value=31 Score=26.20 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=36.6
Q ss_pred eEEEEEEeeEEEEeCCEEEE--ccCCcEEEeCC-CCceeEEecCCccEEEEEEee
Q 022278 243 HGLLLLEGQGIYRLGDSWYP--VQAGDVLWMAP-FVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 243 h~~~iL~G~G~~~~~g~~~~--v~~GD~i~~~~-~~~H~~~n~G~e~~~fi~~kd 294 (300)
.+--+==|.|....||+..+ |+.||.+..+. |-...++--| + +|+++++
T Consensus 37 ~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dg-e--ey~i~re 88 (97)
T 1pcq_O 37 RGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN-E--EVLIMSE 88 (97)
T ss_dssp EEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETT-E--EEEEEEG
T ss_pred ccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECC-E--EEEEEEh
Confidence 45666778888777787665 99999999999 8777777544 2 5666654
No 428
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=50.39 E-value=29 Score=29.70 Aligned_cols=69 Identities=12% Similarity=0.072 Sum_probs=45.2
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEE---eCCE---EEEccCCcEEEeCC----C--CceeEEecCCccEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYR---LGDS---WYPVQAGDVLWMAP----F--VPQWYAALGKTRTR 288 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~---~~g~---~~~v~~GD~i~~~~----~--~~H~~~n~G~e~~~ 288 (300)
.++..++++|..+- .+-....+.|+|++|...+. .+|+ ...+.+||++--.+ . .+..+.+..+..+-
T Consensus 68 ~~~~~~~~~ge~i~-~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~ 146 (260)
T 3kcc_A 68 HCHIHKYPSKSTLI-HQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVA 146 (260)
T ss_dssp TSEEEEECTTCEEE-CTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEE
T ss_pred hCEEEEECCCCEEE-CCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEE
Confidence 45688899999884 34555668999999999887 3554 45578999873221 1 23355665554443
Q ss_pred EE
Q 022278 289 YL 290 (300)
Q Consensus 289 fi 290 (300)
.|
T Consensus 147 ~i 148 (260)
T 3kcc_A 147 EI 148 (260)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 429
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=49.29 E-value=64 Score=27.01 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=44.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeC---CCCc----eEEeeCCeEEEEEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLP---PNFA----HSLRAEGSATLVVFE 175 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfp---a~~~----H~~~N~~~a~vl~v~ 175 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=.. .+.+ ......++++++.+.
T Consensus 45 ~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~ 124 (243)
T 3la7_A 45 VETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAP 124 (243)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEESSSEEEEEEE
T ss_pred eEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEccceEEEEEc
Confidence 45567775443334456799999999999875 24554 467899976321 1222 344457788888885
Q ss_pred ee
Q 022278 176 RR 177 (300)
Q Consensus 176 ~~ 177 (300)
+.
T Consensus 125 ~~ 126 (243)
T 3la7_A 125 IE 126 (243)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 430
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=48.87 E-value=20 Score=29.80 Aligned_cols=69 Identities=4% Similarity=0.012 Sum_probs=44.1
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. .....++....++++++.+.+
T Consensus 35 ~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~ 113 (232)
T 2gau_A 35 PFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPV 113 (232)
T ss_dssp EEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCEEEEEEEH
T ss_pred EEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecceEEEEEEH
Confidence 45667775443334456789999999999874 13443 57889998732 112345555677888888854
No 431
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=48.75 E-value=11 Score=35.92 Aligned_cols=28 Identities=11% Similarity=-0.090 Sum_probs=24.4
Q ss_pred CCEEEEccCCcEEEeCCCCceeEEecCC
Q 022278 257 GDSWYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 257 ~g~~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
..-...++|||++|||+|-.|+..|..+
T Consensus 243 ~~~~v~l~pGe~lfIPsGW~H~V~nled 270 (397)
T 3kv9_A 243 KCYKCVVKQGHTLFVPTGWIHAVLTSQD 270 (397)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCCEEEeCCCCeEEccCCcC
Confidence 4466789999999999999999999844
No 432
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=48.35 E-value=24 Score=28.59 Aligned_cols=69 Identities=9% Similarity=0.012 Sum_probs=42.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEe-----CCCCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYL-----PPNFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yf-----pa~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=. ......+....++++++.+.+
T Consensus 64 ~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i~~ 142 (187)
T 3gyd_A 64 CYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPTDFAVLSR 142 (187)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEEEEEEEEH
T ss_pred EEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCeEEEEEcH
Confidence 44566765443334566899999999999876 23433 47889987631 222233444456777777743
No 433
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=48.26 E-value=41 Score=31.30 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=45.9
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CCc-----EEEeccCcEEEeCC----CCceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNA--SGV-----SSKLMVDSYTYLPP----NFAHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg~-----~~~L~~Gds~yfpa----~~~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--.....++.+++|++|.+.+... +|+ ...+.+||++=..+ ...++....++++++.+.+
T Consensus 67 ~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i~~ 146 (469)
T 1o7f_A 67 YENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRIEQ 146 (469)
T ss_dssp EEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEEEH
T ss_pred EEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEEcH
Confidence 446677754433345678899999999999861 232 25788999875432 2234455567888888864
Q ss_pred e
Q 022278 177 R 177 (300)
Q Consensus 177 ~ 177 (300)
.
T Consensus 147 ~ 147 (469)
T 1o7f_A 147 E 147 (469)
T ss_dssp H
T ss_pred H
Confidence 3
No 434
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=48.18 E-value=47 Score=25.28 Aligned_cols=49 Identities=20% Similarity=0.336 Sum_probs=36.6
Q ss_pred eEEEEEEeeEEEEeCC-EEEE--ccCCcEEEeCCCCceeEEecCCccEEEEEEee
Q 022278 243 HGLLLLEGQGIYRLGD-SWYP--VQAGDVLWMAPFVPQWYAALGKTRTRYLLYKD 294 (300)
Q Consensus 243 h~~~iL~G~G~~~~~g-~~~~--v~~GD~i~~~~~~~H~~~n~G~e~~~fi~~kd 294 (300)
.+--+==|.|....|| +..| |+.||.+..+.|-...++--| + +|+++++
T Consensus 39 ~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dg-e--ey~i~re 90 (99)
T 1p3h_A 39 EGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNG-E--EYLILSA 90 (99)
T ss_dssp EEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETT-E--EEEEEEG
T ss_pred eEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECC-E--EEEEEEh
Confidence 4566677888887778 6664 999999999999888877533 2 5666654
No 435
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=46.94 E-value=47 Score=27.34 Aligned_cols=49 Identities=16% Similarity=0.090 Sum_probs=36.3
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLW 270 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~ 270 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-
T Consensus 28 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 28 VVTERNFQPDELVV-EQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp TEEEEEECTTCBCC-CTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred hcEEEEECCCCEEE-eCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 46788999999984 355566789999999998764 4543 5678999863
No 436
>1ic8_A Hepatocyte nuclear factor 1-alpha; transcription regulation, DNA-binding, POU domain, diabetes, disease mutation, MODY3, transcription/DNA comple; 2.60A {Homo sapiens} SCOP: a.4.1.1 a.35.1.1
Probab=46.31 E-value=1.3 Score=38.18 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=24.2
Q ss_pred cCCcccccccCCCCcceeeecCCCCChh
Q 022278 27 CSAPSILDRETSSKPMYWKVTNPTLSPS 54 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqver~~~sps 54 (300)
-|+.+||+.+|+|++.||+++|+.+.++
T Consensus 44 itQ~~lA~~~GiSqs~ISr~l~~~~~~~ 71 (194)
T 1ic8_A 44 IPQREVVDTTGLNQSHLSQHLNKGTPMK 71 (194)
T ss_dssp CCHHHHHHHHCCCHHHHHHHHHSBCCCC
T ss_pred CCHHHHHHHhCCChHHHHHHHhcCcccc
Confidence 3678899999999999999999876555
No 437
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=46.20 E-value=54 Score=27.52 Aligned_cols=64 Identities=17% Similarity=0.076 Sum_probs=42.4
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEEe--CCCCceeEEecCCc
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWM--APFVPQWYAALGKT 285 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~~--~~~~~H~~~n~G~e 285 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++-. ....+..+.+..+.
T Consensus 31 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~ 102 (250)
T 3e6c_C 31 MGLIRDFAKGSAVI-MPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPT 102 (250)
T ss_dssp GSEEEEECTTCEEE-CTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSE
T ss_pred hCeEEEECCCCEEE-CCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccE
Confidence 46788899999884 345556689999999998763 4554 45679998732 11134455555443
No 438
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=45.35 E-value=28 Score=29.34 Aligned_cols=47 Identities=11% Similarity=0.024 Sum_probs=35.1
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVL 269 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i 269 (300)
+++.++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++
T Consensus 43 ~~~~~~~~ge~i~-~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 43 PVVETFERNKTIF-FPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CEEEEECTTCEEE-CTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred heeEEECCCCEEE-cCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 5578889999884 344556688999999998773 4544 457899976
No 439
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=44.37 E-value=14 Score=30.50 Aligned_cols=69 Identities=7% Similarity=-0.058 Sum_probs=44.6
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEEeCC---C---CceeEEecCCccEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWMAP---F---VPQWYAALGKTRTR 288 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~~~~---~---~~H~~~n~G~e~~~ 288 (300)
.++..++++|..+- .+-....+.|+|++|...+.. +|+. ..+.+||++--.+ + .+..+.+..+..+-
T Consensus 31 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~ 109 (227)
T 3dkw_A 31 SSDLVNLDKGAYVF-RQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLF 109 (227)
T ss_dssp SCEEEECCTTEEEE-CTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEE
T ss_pred hCEEEEECCCCEEE-cCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEE
Confidence 35678889999874 355566689999999998874 4544 4566999864321 2 23455565554444
Q ss_pred EE
Q 022278 289 YL 290 (300)
Q Consensus 289 fi 290 (300)
.|
T Consensus 110 ~i 111 (227)
T 3dkw_A 110 RF 111 (227)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 440
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=44.16 E-value=21 Score=27.36 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=20.1
Q ss_pred EEEEeCCEEEEccCCcEEEeCC
Q 022278 252 GIYRLGDSWYPVQAGDVLWMAP 273 (300)
Q Consensus 252 G~~~~~g~~~~v~~GD~i~~~~ 273 (300)
+++..+|+-|.|.+||++.++-
T Consensus 3 AIi~~gGkQykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKTGGKQYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEETTEEEEECTTCEEEESC
T ss_pred EEEEeCCEEEEEeCCCEEEECC
Confidence 5788999999999999999984
No 441
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=44.02 E-value=28 Score=36.42 Aligned_cols=69 Identities=14% Similarity=0.073 Sum_probs=44.3
Q ss_pred EEEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCC------c--EEEeccCcEEEe----CCCCceEEeeCCeEEEEEE
Q 022278 107 YLANMQENARSALPPHDVERFIFVVQGSAMLTNASG------V--SSKLMVDSYTYL----PPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 107 ~lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg------~--~~~L~~Gds~yf----pa~~~H~~~N~~~a~vl~v 174 (300)
....+++|..--.....++.|+.|++|++.+.+ .+ + ...+.+||+|-- ..-...+.+..++++++.+
T Consensus 66 ~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i-~~~~~~~~~~~v~~l~~G~sFGEall~n~pRtaTv~a~~~s~l~~l 144 (999)
T 4f7z_A 66 YYENLEKGITLFRQGDIGTNWYAVLAGSLDVKV-SETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (999)
T ss_dssp EEEEECTTCEEECTTSCCCEEEEEEESEEEEEE-CSSSCTTSCEEEEEEETTCEECGGGGGTCCCSSEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEE-ecCCCCCCceeEEEecCCcchhhhhccCCCcceEEEeccceEEEEE
Confidence 455667775543345778999999999999988 31 1 247899998742 1011223444667777776
Q ss_pred Ee
Q 022278 175 ER 176 (300)
Q Consensus 175 ~~ 176 (300)
.+
T Consensus 145 ~r 146 (999)
T 4f7z_A 145 EQ 146 (999)
T ss_dssp EH
T ss_pred EH
Confidence 43
No 442
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=42.90 E-value=70 Score=31.04 Aligned_cols=69 Identities=13% Similarity=0.003 Sum_probs=49.9
Q ss_pred ceEEEEEEecCCccc-Ccc-eeeccceEEEEEEeeEEEEeCCEEEEccCCcEEEeCCCCceeEEecCCccEEEEE
Q 022278 219 DFNIHIMDFQPGDFL-NVK-EVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVLWMAPFVPQWYAALGKTRTRYLL 291 (300)
Q Consensus 219 ~~~~~~~tl~PG~~~-p~~-~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i~~~~~~~H~~~n~G~e~~~fi~ 291 (300)
.+++++. .++.++ ... -...-++-+++-+|.+.+.-.=-+..|++||++.||-|+.+.+.-.+ +.+-++
T Consensus 156 G~aI~~y--~~n~sM~~~~f~NaDGD~Livpq~G~l~i~TEfG~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi 226 (471)
T 1eyb_A 156 GLAIHIF--LCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE--ETRGYI 226 (471)
T ss_dssp CEEEEEE--EECSCCCSEEEEESSEEEEEEEEESCEEEEETTEEEEECTTEEEEECTTCCEEEECSS--SEEEEE
T ss_pred ceEEEEE--eCCCCcccceeecCCCCEEEEEEeCCEEEEEecccEEeccCCEEEECCccEEEEeeCC--CceEEE
Confidence 3454444 356665 221 22234456888999999999999999999999999999999998776 555433
No 443
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=41.24 E-value=20 Score=29.57 Aligned_cols=70 Identities=13% Similarity=0.143 Sum_probs=43.4
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEE--cCCcE---EEeccCcEEEeCC---CC---ceEEeeCCeEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTN--ASGVS---SKLMVDSYTYLPP---NF---AHSLRAEGSATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v--~gg~~---~~L~~Gds~yfpa---~~---~H~~~N~~~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .+|++ ..+.+||.+=..+ +. ..+....++++++.+.+
T Consensus 34 ~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 113 (227)
T 3dkw_A 34 LVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPSQLFRFSN 113 (227)
T ss_dssp EEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCCEEEEEES
T ss_pred EEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcEEEEEEeH
Confidence 34556664432233456889999999999875 13433 4678999875332 22 33344467788888854
Q ss_pred e
Q 022278 177 R 177 (300)
Q Consensus 177 ~ 177 (300)
.
T Consensus 114 ~ 114 (227)
T 3dkw_A 114 K 114 (227)
T ss_dssp H
T ss_pred H
Confidence 3
No 444
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=40.69 E-value=24 Score=33.31 Aligned_cols=34 Identities=9% Similarity=0.305 Sum_probs=25.7
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeec
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRY 178 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y 178 (300)
-+.++++||.+|+|+|--|.+.|-+.+ |.|..-|
T Consensus 217 ~ev~l~pGEtLfIPsGWwH~V~nledS--Iai~~NF 250 (371)
T 3k3o_A 217 YKCSVKQGQTLFIPTGWIHAVLTPVDC--LAFGGNF 250 (371)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEE--EEEEEEE
T ss_pred EEEEECCCcEEEeCCCCeEEEecCCCe--EEECCcc
Confidence 457899999999999999999983332 3444444
No 445
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=40.35 E-value=31 Score=33.25 Aligned_cols=66 Identities=8% Similarity=0.187 Sum_probs=43.9
Q ss_pred cCCCcCCCCCCC--ceEEEEEEECEEEEEEc-----------------------------CCcEEEeccCcEEEeCCCCc
Q 022278 112 QENARSALPPHD--VERFIFVVQGSAMLTNA-----------------------------SGVSSKLMVDSYTYLPPNFA 160 (300)
Q Consensus 112 ~PG~~~~~~~h~--gEEf~yVLeG~v~l~v~-----------------------------gg~~~~L~~Gds~yfpa~~~ 160 (300)
++|+.+..|... .--+..|+.|+=...+- ...+.++++||.+|+|+|--
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 455555666332 33456889998766541 12367899999999999999
Q ss_pred eEEeeCCeEEEEEEEeecc
Q 022278 161 HSLRAEGSATLVVFERRYA 179 (300)
Q Consensus 161 H~~~N~~~a~vl~v~~~y~ 179 (300)
|.+.|-+.+ |.|..-|-
T Consensus 319 H~V~nleds--Iai~~NF~ 335 (447)
T 3kv4_A 319 HAVLTPVDC--LAFGGNFL 335 (447)
T ss_dssp EEEEESSCE--EEEEEEEC
T ss_pred EEEecCCCE--EEEccccc
Confidence 999994443 34444443
No 446
>2hin_A GP39, repressor protein; transcription factor, dimer interface, helix-turn-helix; 1.05A {Enterobacteria phage N15} PDB: 3qws_A
Probab=39.78 E-value=1.2 Score=32.14 Aligned_cols=30 Identities=7% Similarity=-0.043 Sum_probs=26.6
Q ss_pred ccCCcccccccCCCCcceeeecCCCCChhh
Q 022278 26 FCSAPSILDRETSSKPMYWKVTNPTLSPSH 55 (300)
Q Consensus 26 ~~~~~~~a~r~~lsk~~~Sqver~~~sps~ 55 (300)
+.|+++||+.+|+|++-+||=+++...|..
T Consensus 10 ~G~~~~lA~~lGVs~~aVs~W~~g~~iP~~ 39 (71)
T 2hin_A 10 FGDVEKAAVGVGVTPGAVYQWLQAGEIPPL 39 (71)
T ss_dssp HSSHHHHHHHHTSCHHHHHHHHHHTSCCHH
T ss_pred HCCHHHHHHHHCCCHHHHHHHHhCCCCCHH
Confidence 457999999999999999999888888875
No 447
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=39.34 E-value=28 Score=33.00 Aligned_cols=67 Identities=6% Similarity=0.142 Sum_probs=44.0
Q ss_pred cCCCcCCCCCC--CceEEEEEEECEEEEEEc-----------------------------CCcEEEeccCcEEEeCCCCc
Q 022278 112 QENARSALPPH--DVERFIFVVQGSAMLTNA-----------------------------SGVSSKLMVDSYTYLPPNFA 160 (300)
Q Consensus 112 ~PG~~~~~~~h--~gEEf~yVLeG~v~l~v~-----------------------------gg~~~~L~~Gds~yfpa~~~ 160 (300)
++|+.+..|.. +.--+..|+.|+=...+- ...+..+++||.+|+|+|--
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 44555566632 234566788887655541 12467899999999999999
Q ss_pred eEEeeCCeEEEEEEEeeccc
Q 022278 161 HSLRAEGSATLVVFERRYAS 180 (300)
Q Consensus 161 H~~~N~~~a~vl~v~~~y~~ 180 (300)
|.+.|-+.+ |.+..-|-.
T Consensus 262 H~V~nledS--Iai~gNFl~ 279 (392)
T 3pua_A 262 YATLTPVDC--LAFAGHFLH 279 (392)
T ss_dssp EEEEEEEEE--EEEEEEECC
T ss_pred EEEecCCCE--EEEcCcccC
Confidence 999984332 455555544
No 448
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=39.07 E-value=20 Score=27.55 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=19.9
Q ss_pred EEEEeCCEEEEccCCcEEEeCC
Q 022278 252 GIYRLGDSWYPVQAGDVLWMAP 273 (300)
Q Consensus 252 G~~~~~g~~~~v~~GD~i~~~~ 273 (300)
+++..+|+-|.|.+||++.++-
T Consensus 3 AIi~~gGkQykV~~Gd~i~vek 24 (103)
T 3r8s_R 3 AVFQSGGKQHRVSEGQTVRLEK 24 (103)
T ss_dssp EEEECSSSEEEEETTCEEEESC
T ss_pred EEEEECCEEEEEeCCCEEEECC
Confidence 5788999999999999999974
No 449
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=38.17 E-value=34 Score=33.05 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=26.8
Q ss_pred CcEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeecc
Q 022278 142 GVSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYA 179 (300)
Q Consensus 142 g~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~ 179 (300)
..+.++.+||.+|+|+|=-|.+.|-+.+ +.|..-|-
T Consensus 265 ~~~v~l~pGE~LfIPsGWwH~V~nleds--Iait~NF~ 300 (451)
T 2yu1_A 265 CQRIELKQGYTFVIPSGWIHAVYTPTDT--LVFGGNFL 300 (451)
T ss_dssp CEEEEECTTCEEEECTTCEEEEECSSCE--EEEEEEEC
T ss_pred ceEEEECCCcEEEeCCCceEEEecCCCe--EEEeeeeC
Confidence 3467899999999999999999994433 34444443
No 450
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=38.10 E-value=36 Score=35.62 Aligned_cols=55 Identities=11% Similarity=0.135 Sum_probs=38.9
Q ss_pred CCCceEEEEEEECEEEEEEcCC--cEEEeccCcEEEeC---CCCceE--Eee-CCeEEEEEEEe
Q 022278 121 PHDVERFIFVVQGSAMLTNASG--VSSKLMVDSYTYLP---PNFAHS--LRA-EGSATLVVFER 176 (300)
Q Consensus 121 ~h~gEEf~yVLeG~v~l~v~gg--~~~~L~~Gds~yfp---a~~~H~--~~N-~~~a~vl~v~~ 176 (300)
...++.|++|++|++++.. .+ ...+|++||+|=-- -+.++. ++. ...+.++.+.+
T Consensus 376 GE~gds~YIIlsG~V~V~~-~~~~~v~~L~~Gd~FGElALL~~~PR~aTV~a~~d~c~fl~i~k 438 (999)
T 4f7z_A 376 GEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK 438 (999)
T ss_dssp TSBCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECGGGGTCSCBCSSEEEESSSSEEEEEEEH
T ss_pred CCcCCeEEEEEeeEEEEEE-cCCcceEEecCCCcccchhhccCCCeeEEEEEecCceEEEEeeH
Confidence 4578999999999999987 54 35789999997532 234443 333 33588887765
No 451
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=37.95 E-value=2.7 Score=32.50 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=25.5
Q ss_pred EEEEEee--EEEEeCCE-EEEccCCcEEEeCCCC
Q 022278 245 LLLLEGQ--GIYRLGDS-WYPVQAGDVLWMAPFV 275 (300)
Q Consensus 245 ~~iL~G~--G~~~~~g~-~~~v~~GD~i~~~~~~ 275 (300)
-|++.|+ |.+.+||. -+.+++||.+.+.+|.
T Consensus 33 TYvI~GeGSG~I~lNGAAArl~~~GD~vII~aY~ 66 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYA 66 (102)
T ss_dssp EECEEESSTTCEEEEGGGGGGCCTTCEEEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHHHhccCCCCEEEEEEcc
Confidence 5777765 88999994 6889999999998775
No 452
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=37.53 E-value=27 Score=34.05 Aligned_cols=57 Identities=7% Similarity=0.104 Sum_probs=39.5
Q ss_pred cCCCcCCCCCCCce--EEEEEEECEEEEEEc-----------------------------CCcEEEeccCcEEEeCCCCc
Q 022278 112 QENARSALPPHDVE--RFIFVVQGSAMLTNA-----------------------------SGVSSKLMVDSYTYLPPNFA 160 (300)
Q Consensus 112 ~PG~~~~~~~h~gE--Ef~yVLeG~v~l~v~-----------------------------gg~~~~L~~Gds~yfpa~~~ 160 (300)
++|+.+..|..... -+..|+.|+=...+- ..-+.++++||.+|+|+|--
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 45555566643333 356888887666541 12257899999999999999
Q ss_pred eEEeeCCe
Q 022278 161 HSLRAEGS 168 (300)
Q Consensus 161 H~~~N~~~ 168 (300)
|.+.|-+.
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999433
No 453
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=37.01 E-value=18 Score=35.75 Aligned_cols=25 Identities=8% Similarity=-0.072 Sum_probs=22.5
Q ss_pred EEEccCCcEEEeCCCCceeEEecCC
Q 022278 260 WYPVQAGDVLWMAPFVPQWYAALGK 284 (300)
Q Consensus 260 ~~~v~~GD~i~~~~~~~H~~~n~G~ 284 (300)
...++|||.+|||+|-.|+..|.-+
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEecCCceEEEecCCC
Confidence 4789999999999999999999844
No 454
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=36.58 E-value=32 Score=30.41 Aligned_cols=48 Identities=13% Similarity=0.098 Sum_probs=35.8
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CC--EEEEccCCcEE
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GD--SWYPVQAGDVL 269 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g--~~~~v~~GD~i 269 (300)
.+...++++|..+= .+-..-.+.|+|++|...+.. +| ....+.+||++
T Consensus 35 ~~~~~~~~~g~~i~-~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 35 SVQPLRAAAGQVLL-RQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp HCEEEEECTTCEEE-CTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred hCeEEEECCCCEEE-eCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 45678889998873 355556688999999998864 23 46678999986
No 455
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=36.18 E-value=2e+02 Score=24.39 Aligned_cols=97 Identities=7% Similarity=-0.017 Sum_probs=55.3
Q ss_pred CCCCCCcccC-CceeEEEEee-CCC--CCcceEEEEEEecCCcccCcceeeccceEEEEEEee-EEEEeCC-EEEEccCC
Q 022278 193 TDKQPLLETP-GEVFQLRKLL-PQA--VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQ-GIYRLGD-SWYPVQAG 266 (300)
Q Consensus 193 ~~d~~~~~~~-g~~~~~~~l~-p~~--~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~-G~~~~~g-~~~~v~~G 266 (300)
.+|.+..+-. |++.+.+.+. |.+ ..|++-+.+-+++-.+ |+-.--+.+-.+.+|+|+ ..+..+| ..+.++++
T Consensus 16 ~~d~~~~pWkNGgG~TrEI~~~P~~~~~~F~wRiSiA~V~~~g--~FS~FpG~dR~l~lL~G~gl~L~~~g~~~~~L~~~ 93 (193)
T 3esg_A 16 AVDYVRMPWKNGGGSTEEITRDAGTGLEGFGWRLSIADIGESG--GFSSFAGYQRVITVIQGAGMVLTVDGEEQRGLLPL 93 (193)
T ss_dssp GGGCEEEECTTSSEEEEEEEECCCBTTTBCSEEEEEEEECSSE--ECCCCTTCEEEEEEEESSCEEEEETTSCCEEECBT
T ss_pred HHHCCcccccCCCeEEEEEEEcCCCcCCCceEEEEEEEEcCCC--CCCCCCCceEEEEEEcCCcEEEEeCCCccEecCCC
Confidence 3444444433 5666777765 543 2366666666666533 343445667789999998 5566666 46777777
Q ss_pred cEEEeCCCCceeEEec-CC-ccEEEEE
Q 022278 267 DVLWMAPFVPQWYAAL-GK-TRTRYLL 291 (300)
Q Consensus 267 D~i~~~~~~~H~~~n~-G~-e~~~fi~ 291 (300)
+....+...+=.-+.+ |. .+|-.++
T Consensus 94 ~p~~F~G~~~v~a~L~~G~v~DfNlM~ 120 (193)
T 3esg_A 94 QPFAFRGDSQVSCRLITGPIRDFNLIY 120 (193)
T ss_dssp CCEEEETTSCEEEEESSSCEEEEEEEE
T ss_pred CCEEeCCCCeEEEEECCCCEEEEEEEE
Confidence 7654544443333333 33 3444443
No 456
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=35.42 E-value=3.2 Score=31.80 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=26.5
Q ss_pred EEEEEEee--EEEEeCC-EEEEccCCcEEEeCCCC
Q 022278 244 GLLLLEGQ--GIYRLGD-SWYPVQAGDVLWMAPFV 275 (300)
Q Consensus 244 ~~~iL~G~--G~~~~~g-~~~~v~~GD~i~~~~~~ 275 (300)
.-|++.|+ |++.+|| --+.+++||.+.+.+|.
T Consensus 31 eTYvI~GerSG~I~lNGAAArl~~~GD~vII~aY~ 65 (97)
T 1uhe_A 31 STYVILGKKRGEICVNGAAARKVAIGDVVIILAYA 65 (97)
T ss_dssp EEECEEECSTTCEEEEGGGGGGCCTTCEEEEEEEE
T ss_pred EEEEEeeccCCeEEEchHHHccCCCCCEEEEEECc
Confidence 35888895 8899999 46889999999988764
No 457
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=33.80 E-value=48 Score=30.93 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=40.6
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcC--------Cc---EEEeccCcEEEeC---CCCc--eEEeeCCeEEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNAS--------GV---SSKLMVDSYTYLP---PNFA--HSLRAEGSATL 171 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~g--------g~---~~~L~~Gds~yfp---a~~~--H~~~N~~~a~v 171 (300)
...+.+|..--.....++.|++|++|++.+...+ |+ ...+.+||+|=-- .+.+ .++...+++++
T Consensus 292 ~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~fGE~all~~~~r~~tv~A~~~~~l 371 (416)
T 3tnp_B 292 TKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYFGELALVTNKPRAASAHAIGTVKC 371 (416)
T ss_dssp EEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEESGGGGTCCSCCSSEEEEEEEEEE
T ss_pred EEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEecHHHHhCCCCceeEEEEcCCeEE
Confidence 4456777544333456799999999999998511 22 3678899977311 1222 22333456666
Q ss_pred EEEEe
Q 022278 172 VVFER 176 (300)
Q Consensus 172 l~v~~ 176 (300)
+.+.+
T Consensus 372 l~I~~ 376 (416)
T 3tnp_B 372 LAMDV 376 (416)
T ss_dssp EEEEH
T ss_pred EEEEH
Confidence 66643
No 458
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=33.66 E-value=85 Score=26.05 Aligned_cols=67 Identities=9% Similarity=0.076 Sum_probs=42.5
Q ss_pred EEEEEecCCcccCcceeeccceEEEEEEeeEEEEe---CCEE---EEccCCcEEEeCC---CC----ceeEEecCCccEE
Q 022278 222 IHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRL---GDSW---YPVQAGDVLWMAP---FV----PQWYAALGKTRTR 288 (300)
Q Consensus 222 ~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~---~g~~---~~v~~GD~i~~~~---~~----~H~~~n~G~e~~~ 288 (300)
++..++++|..+- .+-....+.|+|++|...+.. +|+. .-+ +||++--.+ +. ++...+.- ++.+
T Consensus 18 ~~~~~~~~ge~i~-~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~ 94 (238)
T 2bgc_A 18 IKPKQFHKKELIF-NQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQAT 94 (238)
T ss_dssp CCCEEEETTCEEE-CTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEE
T ss_pred ceEEEECCCCEEE-eCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceE
Confidence 5567788998873 344556678999999998764 4543 334 899874432 22 45666654 4555
Q ss_pred EEE
Q 022278 289 YLL 291 (300)
Q Consensus 289 fi~ 291 (300)
.+.
T Consensus 95 v~~ 97 (238)
T 2bgc_A 95 AYV 97 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 459
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=33.52 E-value=36 Score=32.38 Aligned_cols=34 Identities=9% Similarity=0.301 Sum_probs=25.5
Q ss_pred cEEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeec
Q 022278 143 VSSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRY 178 (300)
Q Consensus 143 ~~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y 178 (300)
-+..+++||.+|+|+|--|.+.|-+.+ |.|..-|
T Consensus 245 ~~v~l~pGe~lfIPsGW~H~V~nledS--Iai~~NF 278 (397)
T 3kv9_A 245 YKCVVKQGHTLFVPTGWIHAVLTSQDC--MAFGGNF 278 (397)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEE--EEEEEEE
T ss_pred EEEEECCCCEEEeCCCCeEEccCCcCe--EEECCcc
Confidence 356899999999999999999984332 3444444
No 460
>1zx4_A P1 PARB, plasmid partition PAR B protein, PARB; translation; HET: CIT; 2.98A {Enterobacteria phage P1} PDB: 2ntz_A
Probab=33.33 E-value=3.1 Score=35.78 Aligned_cols=34 Identities=15% Similarity=0.016 Sum_probs=30.8
Q ss_pred cCCcccccccCCCCcceeee----------------cCCCCChhh-----hhccc
Q 022278 27 CSAPSILDRETSSKPMYWKV----------------TNPTLSPSH-----LQDLP 60 (300)
Q Consensus 27 ~~~~~~a~r~~lsk~~~Sqv----------------er~~~sps~-----I~~~l 60 (300)
.||++||++.|+|+.-+|++ |++++.|++ +++.+
T Consensus 25 ~tQ~eIA~~lGiSr~~VSR~L~~A~~~~~lv~lfp~~~~ls~p~~~~L~k~~~~l 79 (192)
T 1zx4_A 25 MSQKDIAAKEGLSQAKVTRALQAASAPEELVALFPVQSELTFSDYKTLCAVGDEM 79 (192)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHTSCHHHHTTCSCGGGCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHhCcCHHHHHHHHHHhccchhhHHHcCCcccCccchHHHHHHHHHHh
Confidence 89999999999999999994 899999998 66666
No 461
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=32.54 E-value=49 Score=30.33 Aligned_cols=68 Identities=15% Similarity=0.226 Sum_probs=41.1
Q ss_pred EEEcCCCcCCCCCCCceEEEEEEECEEEEEEc--CCc----EEEeccCcEEEeCC---CCc--eEEeeCCeEEEEEEEe
Q 022278 109 ANMQENARSALPPHDVERFIFVVQGSAMLTNA--SGV----SSKLMVDSYTYLPP---NFA--HSLRAEGSATLVVFER 176 (300)
Q Consensus 109 v~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~--gg~----~~~L~~Gds~yfpa---~~~--H~~~N~~~a~vl~v~~ 176 (300)
..+.+|..--.....++.|++|++|++.+... +|+ ...+.+||+|=--+ +.+ .++...++++++.+.+
T Consensus 274 ~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~~~ll~i~~ 352 (381)
T 4din_B 274 VQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPLKCVKLDR 352 (381)
T ss_dssp CCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSCBEEEEEEH
T ss_pred ccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCCEEEEEEeH
Confidence 34556654433345679999999999999862 121 46799999872111 222 2333456677776643
No 462
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=32.17 E-value=65 Score=32.54 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=44.5
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCc--EEEeccCcEEEeC---CC--CceEEeeCC-eEEEEEEEe
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGV--SSKLMVDSYTYLP---PN--FAHSLRAEG-SATLVVFER 176 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~--~~~L~~Gds~yfp---a~--~~H~~~N~~-~a~vl~v~~ 176 (300)
..++++|..--......+.+++|++|.+.+.. .|+ ...+.+||++=.- .+ ...+.+..+ +++++.+.+
T Consensus 58 ~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~~-~g~~il~~l~~Gd~fGe~al~~~~~~~~tv~A~edd~~ll~I~~ 133 (694)
T 3cf6_E 58 ESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI-YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDK 133 (694)
T ss_dssp EEECSTTCEEECTTSBCCEEEEEEESEEEEEE-TTTEEEEEEETTCEECHHHHHHTCBCSSEEEECSSSEEEEEEEH
T ss_pred EEEECCCCEEECCCCcCCeEEEEEEEEEEEEE-eCCEEEEEeCCCCEeehHHHhCCCCceEEEEEeeCceEEEEEeH
Confidence 44567765443334566889999999999987 554 4688999966321 12 334444566 588888853
No 463
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=31.31 E-value=1e+02 Score=23.07 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=24.7
Q ss_pred EEeccCcEEEeCCCCceEEeeCCeEEEEEE
Q 022278 145 SKLMVDSYTYLPPNFAHSLRAEGSATLVVF 174 (300)
Q Consensus 145 ~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v 174 (300)
-.|++||.+.+|++-+-...+.....++.+
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~~~le~v~F 37 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAASDLNMVGI 37 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEESSSEEEEEE
T ss_pred ceecCCcEEEECCCCceeEEecCCeEEEEE
Confidence 479999999999999999998545666655
No 464
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=30.26 E-value=42 Score=33.09 Aligned_cols=37 Identities=14% Similarity=0.275 Sum_probs=27.7
Q ss_pred EEEeccCcEEEeCCCCceEEeeCCeEEEEEEEeeccccC
Q 022278 144 SSKLMVDSYTYLPPNFAHSLRAEGSATLVVFERRYASLE 182 (300)
Q Consensus 144 ~~~L~~Gds~yfpa~~~H~~~N~~~a~vl~v~~~y~~~~ 182 (300)
...+++||.+|+|+|--|.+.|-+.+ |.+..-|-...
T Consensus 367 ~v~l~pGEtlfIPsGW~HaV~tleDS--IaiggNFl~~~ 403 (528)
T 3pur_A 367 RVVIKEGQTLLIPAGWIHAVLTPVDS--LVFGGNFLHLG 403 (528)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEE--EEEEEEECCGG
T ss_pred EEEECCCCEEEecCCceEEEecCCCe--EEEcCcccchh
Confidence 46899999999999999999984333 55555554433
No 465
>2cw1_A SN4M; lambda CRO fold, de novo protein; NMR {Synthetic} SCOP: k.46.1.1
Probab=28.82 E-value=3.2 Score=29.28 Aligned_cols=27 Identities=11% Similarity=-0.082 Sum_probs=22.8
Q ss_pred CCcccccccCCCCcceeeecCCCCChh
Q 022278 28 SAPSILDRETSSKPMYWKVTNPTLSPS 54 (300)
Q Consensus 28 ~~~~~a~r~~lsk~~~Sqver~~~sps 54 (300)
|+..+|+++|+|++-+||.+|..-...
T Consensus 15 sq~~~A~~Lgvsq~aVS~~~~~~r~i~ 41 (65)
T 2cw1_A 15 NQEYAARALGLSQKLIEEVLKRGLPVY 41 (65)
T ss_dssp CHHHHHHHSSSCHHHHHHHHHTTCCCB
T ss_pred CHHHHHHHhCCCHHHHHHHHHhcCCce
Confidence 999999999999999999987654333
No 466
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=28.43 E-value=4.9 Score=31.32 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=21.6
Q ss_pred CCCccCCcccccccCCCCcceeeecC
Q 022278 23 DGGFCSAPSILDRETSSKPMYWKVTN 48 (300)
Q Consensus 23 ~~~~~~~~~~a~r~~lsk~~~Sqver 48 (300)
.+..+|.++||++.++|+.+++|+=+
T Consensus 23 ~~~~~s~~ela~~~~i~~~~v~~il~ 48 (129)
T 2y75_A 23 GEGPTSLKSIAQTNNLSEHYLEQLVS 48 (129)
T ss_dssp TSCCBCHHHHHHHTTSCHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHCcCHHHHHHHHH
Confidence 45678999999999999999887643
No 467
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=27.75 E-value=5 Score=30.70 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=24.8
Q ss_pred EEEEEe---eEEEEeCC-EEEEccCCcEEEeCCCC
Q 022278 245 LLLLEG---QGIYRLGD-SWYPVQAGDVLWMAPFV 275 (300)
Q Consensus 245 ~~iL~G---~G~~~~~g-~~~~v~~GD~i~~~~~~ 275 (300)
-|++.| .|++.+|| --+.+++||.+.+.+|.
T Consensus 33 TYvI~GerGSG~I~lNGAAArl~~~GD~vII~aY~ 67 (96)
T 1vc3_B 33 TYALPGERGSGVIGINGAAAHLVKPGDLVILVAYG 67 (96)
T ss_dssp EECEEECTTTTCEEEEGGGGGTCCTTCEEEEEEEE
T ss_pred EEEEEccCCCCeEEEchHHHccCCCCCEEEEEECc
Confidence 466666 48999999 46889999999988764
No 468
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=27.64 E-value=8.7 Score=31.36 Aligned_cols=45 Identities=20% Similarity=0.319 Sum_probs=33.3
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEe---eEEEEeCCE-EEEccCCcEEEeCCCC
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEG---QGIYRLGDS-WYPVQAGDVLWMAPFV 275 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G---~G~~~~~g~-~~~v~~GD~i~~~~~~ 275 (300)
.+.+..+.-|..+ .-|++.| .|++.+||. -+.+++||.+.+.+|.
T Consensus 60 kV~IvNvnNG~Rf----------eTYvI~GerGSG~I~lNGAAArl~~~GD~VII~sYa 108 (143)
T 1pqh_A 60 AIDIWNVTNGKRF----------STYAIAAERGSRIISVNGAAAHCASVGDIVIIASFV 108 (143)
T ss_dssp EEEEEETTTCCEE----------EEEEEEECTTCCCEECCGGGGGTCCTTCEEEEEEEE
T ss_pred EEEEEECCCCceE----------EEEEEEccCCCceEEechHHHccCCCCCEEEEEECc
Confidence 4566666666653 3467766 599999994 5789999999998774
No 469
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=26.00 E-value=1.1e+02 Score=24.61 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=26.3
Q ss_pred EEEEccCCcEEEeCCCCceeEEec--CC-ccEEEEEEe
Q 022278 259 SWYPVQAGDVLWMAPFVPQWYAAL--GK-TRTRYLLYK 293 (300)
Q Consensus 259 ~~~~v~~GD~i~~~~~~~H~~~n~--G~-e~~~fi~~k 293 (300)
.+..+++|+|+.+-|+.+|.-.+. |. ++.+=++.|
T Consensus 112 ~~v~l~~G~FaiFfP~d~H~p~~~~~~~~~~irKvVvK 149 (155)
T 1s4c_A 112 FTVTMKPKMFAVFYPYEPHKPCCVVNGKTEKIKKLVVK 149 (155)
T ss_dssp EEEEECTTEEEEECTTCCEEEEEC-----CBCEEEEEE
T ss_pred EEEEeCCCEEEEECCCcccccccccCCCCCcEEEEEEE
Confidence 678899999999999999987664 33 456666655
No 470
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=25.29 E-value=1.1e+02 Score=26.13 Aligned_cols=21 Identities=10% Similarity=0.001 Sum_probs=18.1
Q ss_pred EEeccCcEEEeCCCCceEEee
Q 022278 145 SKLMVDSYTYLPPNFAHSLRA 165 (300)
Q Consensus 145 ~~L~~Gds~yfpa~~~H~~~N 165 (300)
..-++|+.+.||+...|.+.-
T Consensus 171 i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 171 VAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp ECCCTTEEEEEETTSCEEECC
T ss_pred ecCCCCeEEEECCCCEEeccC
Confidence 456899999999999999883
No 471
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=25.16 E-value=8.4 Score=31.31 Aligned_cols=46 Identities=20% Similarity=0.403 Sum_probs=33.7
Q ss_pred EEEEEEecCCcccCcceeeccceEEEEEEe---eEEEEeCCE-EEEccCCcEEEeCCCCc
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQHGLLLLEG---QGIYRLGDS-WYPVQAGDVLWMAPFVP 276 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G---~G~~~~~g~-~~~v~~GD~i~~~~~~~ 276 (300)
.+.+..+.-|..+ .-|++.| .|++.+||- -+.+++||.+.+.+|..
T Consensus 43 kV~IvNvnNG~Rf----------eTYvI~GerGSG~I~lNGAAArl~~~GD~vII~aYa~ 92 (139)
T 2c45_A 43 QVTIVDIDNGARL----------VTYAITGERGSGVIGINGAAAHLVHPGDLVILIAYAT 92 (139)
T ss_dssp CEEEEETTTCCEE----------EECEEEECTTTTCEEEESSTTTTSCTTCEEEEEECCE
T ss_pred EEEEEECCCCceE----------EEEEEEccCCCCEEEEchHHHccCCCCCEEEEEECCc
Confidence 3556666666653 3467666 589999994 68899999999998864
No 472
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=23.88 E-value=10 Score=29.79 Aligned_cols=50 Identities=14% Similarity=0.337 Sum_probs=35.0
Q ss_pred CCcceEEEEEEecCCcccCcceeeccceEEEEEEe---eEEEEeCCE-EEEccCCcEEEeCCCC
Q 022278 216 VPFDFNIHIMDFQPGDFLNVKEVHYNQHGLLLLEG---QGIYRLGDS-WYPVQAGDVLWMAPFV 275 (300)
Q Consensus 216 ~~~~~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G---~G~~~~~g~-~~~v~~GD~i~~~~~~ 275 (300)
....-.+.+..+.-|..+ .-|++.| .|.+.+||. -+.+++||.+.+.+|.
T Consensus 41 i~~~E~V~I~NvnNG~Rf----------~TYvI~GerGSg~I~lNGAAAr~~~~GD~vII~ay~ 94 (114)
T 3oug_A 41 IIENEKVQVVNLNNGERL----------ETYVIKGEPNSKTIALNGPAARRCEIGDQLFIISYT 94 (114)
T ss_dssp CCTTBEEEEEETTTCCEE----------EEEEEEECTTSCCEEEEGGGGGGCCTTCEEEEEEEE
T ss_pred CCcCCEEEEEECCCCceE----------EEEEEEccCCCCEEEeCCHHHhccCCCCEEEEEECC
Confidence 333334566666666653 3467766 589999994 6889999999998764
No 473
>1jhg_A Trp operon repressor; complex (regulatory protein-peptide), DNA-binding regulatory complex (regulatory protein-peptide) complex; HET: TRP; 1.30A {Escherichia coli} SCOP: a.4.12.1 PDB: 1co0_A* 1mi7_R 1p6z_R 1wrp_R* 1zt9_A* 2oz9_R* 3ssw_R 3wrp_A 1rcs_A* 1wrs_R* 1wrt_R 2xdi_A 3ssx_R* 1trr_A* 1tro_A*
Probab=23.44 E-value=4.2 Score=31.35 Aligned_cols=26 Identities=12% Similarity=0.022 Sum_probs=21.9
Q ss_pred CCccCCcccccccCCCCcceeeecCC
Q 022278 24 GGFCSAPSILDRETSSKPMYWKVTNP 49 (300)
Q Consensus 24 ~~~~~~~~~a~r~~lsk~~~Sqver~ 49 (300)
+|=-|+.+||+++|.|.++||-+-|-
T Consensus 56 ~ge~TQREIA~~lGiS~stISRi~r~ 81 (101)
T 1jhg_A 56 RGEMSQRELKNELGAGIATITRGSNS 81 (101)
T ss_dssp HCCSCHHHHHHHHCCCHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHCCChhhhhHHHHH
Confidence 55578999999999999999988553
No 474
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=22.88 E-value=1.4e+02 Score=25.24 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=41.3
Q ss_pred EEEEEEecCCcccCcceeeccc---eEEEEE----EeeEEEEeC-------------------CE--EEEccCCcEEEeC
Q 022278 221 NIHIMDFQPGDFLNVKEVHYNQ---HGLLLL----EGQGIYRLG-------------------DS--WYPVQAGDVLWMA 272 (300)
Q Consensus 221 ~~~~~tl~PG~~~p~~~~H~~e---h~~~iL----~G~G~~~~~-------------------g~--~~~v~~GD~i~~~ 272 (300)
.+-...++||+.... |.|... =.+|+- .|+-.+... .. ...-++||++..|
T Consensus 104 ~~W~~~~~~G~~~~~-H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFp 182 (216)
T 2rg4_A 104 DIWINILPEGGVHGS-HIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWE 182 (216)
T ss_dssp EEEEEEECTTCCEEE-ECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEE
T ss_pred eEEEEEcCCCCcccC-ccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEEC
Confidence 455667789998775 566543 335553 244444432 11 5677999999999
Q ss_pred CCCceeEEecC
Q 022278 273 PFVPQWYAALG 283 (300)
Q Consensus 273 ~~~~H~~~n~G 283 (300)
+..+|+..-..
T Consensus 183 S~l~H~V~p~~ 193 (216)
T 2rg4_A 183 SWLRHEVPMNM 193 (216)
T ss_dssp TTSCEEECCCC
T ss_pred CCCEEeccCCC
Confidence 99999887643
No 475
>2lnu_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Haloarcula marismortui}
Probab=21.77 E-value=98 Score=26.30 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=23.5
Q ss_pred CCceEEEEEEECEEEEEEcCCcEEEecc
Q 022278 122 HDVERFIFVVQGSAMLTNASGVSSKLMV 149 (300)
Q Consensus 122 h~gEEf~yVLeG~v~l~v~gg~~~~L~~ 149 (300)
-.+.+-.|+.-|++++.+ +|+.++|..
T Consensus 71 ~~g~~~~~~~~G~~~F~l-~G~~~~L~~ 97 (190)
T 2lnu_A 71 SDDRTVRYLHVATLSFDL-DGESRDLHA 97 (190)
T ss_dssp SSSSEEEEEEEEEEEEEE-TTEEEEEEE
T ss_pred cCCceEEEEEeEEEEEEE-CCEEEEEEE
Confidence 367888999999999999 999988875
No 476
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=21.61 E-value=20 Score=32.62 Aligned_cols=48 Identities=8% Similarity=0.077 Sum_probs=0.0
Q ss_pred eEEEEEEecCCcccCcceeeccceEEEEEEeeEEEEeCCEEEEccCCcEE
Q 022278 220 FNIHIMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQAGDVL 269 (300)
Q Consensus 220 ~~~~~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~~~~v~~GD~i 269 (300)
-.++..+++||..+= .+.....+.|+|++|+..+...+ ...+++||++
T Consensus 249 ~~~~~~~~~~ge~I~-~~G~~~~~ly~I~~G~v~v~~~~-~~~l~~G~~f 296 (355)
T 3beh_A 249 RALRARTVPAGAVIC-RIGEPGDRMFFVVEGSVSVATPN-PVELGPGAFF 296 (355)
T ss_dssp --------------------------------------------------
T ss_pred HhceEEEECCCCEEE-eCCCcCceEEEEEeeEEEEEECC-eeEECCCCEE
Confidence 356788899999884 35555667899999999988776 5789999975
No 477
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=20.84 E-value=12 Score=30.73 Aligned_cols=27 Identities=4% Similarity=-0.026 Sum_probs=23.1
Q ss_pred CCCccCCcccccccCCCCcceeeecCC
Q 022278 23 DGGFCSAPSILDRETSSKPMYWKVTNP 49 (300)
Q Consensus 23 ~~~~~~~~~~a~r~~lsk~~~Sqver~ 49 (300)
.+...|.++||++.++|..|++|+=+.
T Consensus 25 ~~~~~s~~~IA~~~~is~~~l~kil~~ 51 (162)
T 3k69_A 25 RDSKVASRELAQSLHLNPVMIRNILSV 51 (162)
T ss_dssp TTSCBCHHHHHHHHTSCGGGTHHHHHH
T ss_pred CCCCcCHHHHHHHHCcCHHHHHHHHHH
Confidence 357899999999999999999997543
No 478
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=20.79 E-value=21 Score=32.43 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=0.0
Q ss_pred EEEEcCCCcCCCCCCCceEEEEEEECEEEEEEcCCcEEEeccCcEE
Q 022278 108 LANMQENARSALPPHDVERFIFVVQGSAMLTNASGVSSKLMVDSYT 153 (300)
Q Consensus 108 lv~l~PG~~~~~~~h~gEEf~yVLeG~v~l~v~gg~~~~L~~Gds~ 153 (300)
..+++||..--......+++++|++|++++.. .+ ...+++||.+
T Consensus 253 ~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~-~~-~~~l~~G~~f 296 (355)
T 3beh_A 253 ARTVPAGAVICRIGEPGDRMFFVVEGSVSVAT-PN-PVELGPGAFF 296 (355)
T ss_dssp ----------------------------------------------
T ss_pred EEEECCCCEEEeCCCcCceEEEEEeeEEEEEE-CC-eeEECCCCEE
Confidence 44556665443333456789999999999987 55 5678888865
No 479
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=20.57 E-value=1.1e+02 Score=26.86 Aligned_cols=49 Identities=14% Similarity=0.111 Sum_probs=38.1
Q ss_pred EEEEEeeEEEEeCCEEEE---ccCCcEEEeCCCCceeEEec--CCccEEEEEEe
Q 022278 245 LLLLEGQGIYRLGDSWYP---VQAGDVLWMAPFVPQWYAAL--GKTRTRYLLYK 293 (300)
Q Consensus 245 ~~iL~G~G~~~~~g~~~~---v~~GD~i~~~~~~~H~~~n~--G~e~~~fi~~k 293 (300)
.-+-+|.-++.-||.+.. |+.||.+..++|.|+-..|+ |.+++--|.-|
T Consensus 10 ~~Fa~GT~VLMADGS~K~IEdI~vGD~Vmg~DG~pR~V~~l~rG~d~mY~I~~k 63 (237)
T 1gpp_A 10 ACFAKGTNVLMADGSIECIENIEVGNKVMGKDGRPREVIKLPRGSETMYSVVQK 63 (237)
T ss_dssp EEECTTCEEEBTTSCEEEGGGCCTTCEEEBTTSSEEEEEECCEEEEEEEEEEEC
T ss_pred cccCCCCEEEEeCCCcceeeecccCCEEecCCCCcceEEEeccccceeEEEeec
Confidence 456788888888997765 68999999999999988887 44555555554
No 480
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=20.18 E-value=20 Score=31.41 Aligned_cols=46 Identities=15% Similarity=0.061 Sum_probs=30.1
Q ss_pred ceeeccceEEEEEEeeEEEEeCCE------EEEccCCcEEEeCCCCceeEEe
Q 022278 236 KEVHYNQHGLLLLEGQGIYRLGDS------WYPVQAGDVLWMAPFVPQWYAA 281 (300)
Q Consensus 236 ~~~H~~eh~~~iL~G~G~~~~~g~------~~~v~~GD~i~~~~~~~H~~~n 281 (300)
||||.+.|...-+.....+.++|+ -..+++||.+.+-.|....+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~L~~~~~~Hl~VLRl~~Gd~v~l~dg~G~~~~a 59 (234)
T 1z85_A 8 HHHHHMPHLFYGTAQNGEVIFDEREAHHMRVVRLKEGDVIEATDGNGFSYTC 59 (234)
T ss_dssp ------CCCEECEEETTEEEECHHHHHHHHHTTCCTTCEEEEECSBSEEEEE
T ss_pred cccccCCCCCCccCCCCEEEeCHHHHHHHHhhcCCCCCEEEEEeCCCCEEEE
Confidence 577888888877776667777774 4468999999988887775544
No 481
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=20.12 E-value=97 Score=31.27 Aligned_cols=45 Identities=13% Similarity=0.094 Sum_probs=34.6
Q ss_pred EEEecCCcccCcceeeccceEEEEEEeeEEEEeCCE--EEEccCCcEE
Q 022278 224 IMDFQPGDFLNVKEVHYNQHGLLLLEGQGIYRLGDS--WYPVQAGDVL 269 (300)
Q Consensus 224 ~~tl~PG~~~p~~~~H~~eh~~~iL~G~G~~~~~g~--~~~v~~GD~i 269 (300)
..++++|..+= .+-....+.|+|++|...+...|+ ...+.+||++
T Consensus 58 ~~~~~kGe~I~-~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLF-NQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEE-CTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred EEEECCCCEEE-CCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEe
Confidence 56889999873 344555678999999999887664 6778899965
Done!