BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022280
(300 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541506|ref|XP_002511817.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis]
gi|223548997|gb|EEF50486.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis]
Length = 318
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/316 (71%), Positives = 258/316 (81%), Gaps = 25/316 (7%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS--TPLPQLLLDALPHSFVFFDV 59
+KK+VLVVGGTGYLGQHLLQGLSEIE PYD+A THHS TP PQ LLDA+ HS F V
Sbjct: 3 TKKKVLVVGGTGYLGQHLLQGLSEIEDSPYDLAFTHHSNSTP-PQPLLDAVRHS-PSFHV 60
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL++G GF A+ +FGQPDVVVNCAA+S+PR CE DP +AMSIN+PSSLVNWLS+F E +
Sbjct: 61 DLQTGDGFQAITHEFGQPDVVVNCAAISLPRACEKDPATAMSINIPSSLVNWLSTF-EGR 119
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSK+ AEKFI E+C NF ILRSSII+G
Sbjct: 120 DTLLIHLSTDQVYEGVKSFYKEEDEAVPVNVYGKSKLEAEKFISERCLNFVILRSSIIFG 179
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQTISPVPKSLPIQWIDSVLSKGE++EFFHDE RCPVYV+DVV +IL+LTNRW+SE KQM
Sbjct: 180 PQTISPVPKSLPIQWIDSVLSKGEQIEFFHDEFRCPVYVKDVVAVILSLTNRWISESKQM 239
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
QLLLNVGGPDRVSRVQMAE VDRGV SPADISM+I+++V+
Sbjct: 240 QLLLNVGGPDRVSRVQMAEAVADIRGYNSALIKSVSAASVDRGVLSPADISMNISRIVRE 299
Query: 280 LNIDPVTYKDGVKLTL 295
L+ P ++ GVKLTL
Sbjct: 300 LHFSPTPFRHGVKLTL 315
>gi|357514671|ref|XP_003627624.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]
gi|355521646|gb|AET02100.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]
Length = 317
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/319 (70%), Positives = 253/319 (79%), Gaps = 24/319 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKK++L+VGGTGYLGQHLLQ S + VA T+HS+PL Q LLDA P S F VD
Sbjct: 1 MSKKKILIVGGTGYLGQHLLQ--SYYSNQSLTVAFTYHSSPLLQPLLDAFPDS-QSFQVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFDA++ FGQPDVVVNCAA+SVPR CENDPD+A +INVPSSLV WL SF +N
Sbjct: 58 LKSGIGFDAISNAFGQPDVVVNCAAISVPRACENDPDTANAINVPSSLVKWLQSFKQN-S 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAEKFI E NFAILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGEKSFYKEEDIPIPVNVYGKTKVAAEKFISENFPNFAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QT+SPVPKSLPIQWIDS LSK EKV FFHDE RCP++V+D+V IILALT++WLSE KQMQ
Sbjct: 177 QTVSPVPKSLPIQWIDSALSKREKVNFFHDEFRCPIFVKDLVTIILALTSQWLSEGKQMQ 236
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
LLLN GGPDRVSRV+MA+ VDRGV+SPADISMDIT+LVQTL
Sbjct: 237 LLLNAGGPDRVSRVEMADAVAQFRGYDTSLIKAVSASTVDRGVKSPADISMDITRLVQTL 296
Query: 281 NIDPVTYKDGVKLTLAAEA 299
NI+PV++KDGVKLTL EA
Sbjct: 297 NINPVSFKDGVKLTLTTEA 315
>gi|225454083|ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Vitis vinifera]
gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/320 (68%), Positives = 255/320 (79%), Gaps = 23/320 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AMSINVPSSLV WL SF E+
Sbjct: 59 LQSGEGFEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINVPSSLVKWLLSFEESN- 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GP
Sbjct: 118 TLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q ISPVPKSLPIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+
Sbjct: 178 QAISPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMK 237
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
L+LN GGPDRVSR Q+AE VDRGV+SP DISMDIT+L+QTL
Sbjct: 238 LILNAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTL 297
Query: 281 NIDPVTYKDGVKLTLAAEAT 300
+I P + + GV+LTL ++A+
Sbjct: 298 HISPTSLRVGVQLTLESQAS 317
>gi|297810115|ref|XP_002872941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318778|gb|EFH49200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/321 (67%), Positives = 252/321 (78%), Gaps = 24/321 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M K +V++VGGTG+LGQHLLQ + G YDVA THHS+PLP+ LLDA PH F F V
Sbjct: 1 MDKTKVVIVGGTGFLGQHLLQAFAGNNGGDLYDVAFTHHSSPLPRRLLDAFPH-FPAFSV 59
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG GF++++ FGQPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLS+F NK
Sbjct: 60 DLKSGLGFNSISQDFGQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSTFERNK 119
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVYEGVKSFYKEEDE VNVYGKSKVAAE I +KC NFAILRSSII G
Sbjct: 120 -TLLIHLSTDQVYEGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQNFAILRSSIIVG 178
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW-LSEDKQ 238
PQT+SP+PK+LPIQWIDS L KG+ VEFFHDE RCP+YV+D+V I L L +RW +S++KQ
Sbjct: 179 PQTVSPLPKTLPIQWIDSSLKKGDTVEFFHDEFRCPIYVKDLVNITLKLIDRWVVSDEKQ 238
Query: 239 MQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQ 278
MQL+LN GGP+R+SRVQMA+ VDRGV SPADISMDITKL+Q
Sbjct: 239 MQLVLNAGGPERLSRVQMAQVVAEVRGYDMSLIKHVSASSVDRGVVSPADISMDITKLIQ 298
Query: 279 TLNIDPVTYKDGVKLTLAAEA 299
TL I P ++KDGV+LTL +E+
Sbjct: 299 TLEITPTSFKDGVRLTLESES 319
>gi|356520448|ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Glycine max]
Length = 324
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 251/324 (77%), Gaps = 27/324 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIE---GKPY--DVAATHHSTPLPQLLLDALPHSFV 55
MSK ++LVVGGTGYLGQHLLQ G P+ D+A THHS+P PQ LLDA+P S
Sbjct: 1 MSKVKILVVGGTGYLGQHLLQAYVHANANNGTPFAFDLAFTHHSSPPPQPLLDAIPFSLP 60
Query: 56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
F VDLK+G GF+A++ FGQPDVVVNCAA+SVPR CE DP +A +INVPSSLV WL SF
Sbjct: 61 F-QVDLKTGFGFEAISNTFGQPDVVVNCAAISVPRACEIDPATAHAINVPSSLVKWLQSF 119
Query: 116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
E + LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAE+FI E NFAILRSS
Sbjct: 120 -EKRSTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENYPNFAILRSS 178
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
IIYGPQT+SPVPKSLPIQWID L+KGEKVEFFHDE RCP+YV+D+V IIL LT++W+SE
Sbjct: 179 IIYGPQTVSPVPKSLPIQWIDGALAKGEKVEFFHDEFRCPIYVKDLVTIILTLTSQWISE 238
Query: 236 DKQMQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITK 275
KQMQLLLNVGG DRVSR+QMAE VDRGV+SPADISMDIT+
Sbjct: 239 GKQMQLLLNVGGADRVSRLQMAEAVAEFRGYDASLIKSVSASSVDRGVKSPADISMDITR 298
Query: 276 LVQTLNIDPVTYKDGVKLTLAAEA 299
LVQTL I PV++KDGV+LTL EA
Sbjct: 299 LVQTLRIHPVSFKDGVRLTLTTEA 322
>gi|449454474|ref|XP_004144979.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
gi|449472854|ref|XP_004153715.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
Length = 314
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/317 (65%), Positives = 246/317 (77%), Gaps = 23/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS P+ LL ALPH + F VD
Sbjct: 1 MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFD + FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++ WL SF E +
Sbjct: 59 LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVYEGV+SFY EEDE PVNVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPVNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
LLLNVGGP+RVSRV+MAE +DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297
Query: 281 NIDPVTYKDGVKLTLAA 297
+ PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314
>gi|449507663|ref|XP_004163095.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cucumis sativus]
Length = 314
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/317 (64%), Positives = 246/317 (77%), Gaps = 23/317 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M KK+VLVVGGTGYLGQHLL G SEI+G PYD+A T+HS P+ LL ALPH + F VD
Sbjct: 1 MRKKKVLVVGGTGYLGQHLLSGFSEIDGVPYDIAFTYHSFA-PEALLGALPH-LLSFQVD 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
LKSG GFD + FGQPD+VVNCAA+SVPR CE DP SA S+NVP+++ WL SF E +
Sbjct: 59 LKSGQGFDTITENFGQPDIVVNCAAISVPRACEVDPVSAFSVNVPTAIGTWLLSF-EGRN 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVYEGV+SFY EEDE P+NVYGKSK+AAE+++ EK SNFAILRSSII+GP
Sbjct: 118 TLFIHLSTDQVYEGVESFYNEEDETIPLNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPVPKSLP+QWID+ LS+G +VEFFHDE RCPVYV+DVV +I+ L W+SE KQMQ
Sbjct: 178 QTISPVPKSLPVQWIDATLSEGNEVEFFHDEFRCPVYVKDVVNVIITLIKTWISEGKQMQ 237
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
LLLNVGGP+RVSRV+MAE +DRGV+SPADISM+I KL+Q L
Sbjct: 238 LLLNVGGPNRVSRVEMAETVAEIRGHKKSLIKRVSASSIDRGVKSPADISMNIGKLIQIL 297
Query: 281 NIDPVTYKDGVKLTLAA 297
+ PV++ DGV+LTL +
Sbjct: 298 AMSPVSFTDGVRLTLCS 314
>gi|30678677|ref|NP_191965.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656499|gb|AEE81899.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 327
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/320 (65%), Positives = 248/320 (77%), Gaps = 25/320 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
+L+LN GGP+R+SRVQMA+ +DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301
Query: 280 LNIDPVTYKDGVKLTLAAEA 299
L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321
>gi|334186246|ref|NP_001190643.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656502|gb|AEE81902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 331
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 248/324 (76%), Gaps = 29/324 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMA------------------------EVDRGVQSPADISMDITK 275
+L+LN GGP+R+SRVQMA ++DRGV SPADISMDITK
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSLFCQIDRGVVSPADISMDITK 301
Query: 276 LVQTLNIDPVTYKDGVKLTLAAEA 299
L+ TL + P ++K+GV+LTL +E+
Sbjct: 302 LIHTLELSPTSFKEGVRLTLDSES 325
>gi|110736655|dbj|BAF00291.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis
thaliana]
Length = 327
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/320 (65%), Positives = 247/320 (77%), Gaps = 25/320 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAIL SSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILGSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S+DKQM
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSDDKQM 241
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
+L+LN GGP+R+SRVQMA+ +DRGV SPADISMDITKL+ T
Sbjct: 242 RLVLNAGGPERLSRVQMAQMVAEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHT 301
Query: 280 LNIDPVTYKDGVKLTLAAEA 299
L + P ++K+GV+LTL +E+
Sbjct: 302 LELSPTSFKEGVRLTLDSES 321
>gi|356506285|ref|XP_003521916.1| PREDICTED: LOW QUALITY PROTEIN: methionine adenosyltransferase 2
subunit beta-like [Glycine max]
Length = 325
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 245/325 (75%), Gaps = 32/325 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSE--------IEGKPY--DVAATHHSTPLPQLLLDAL 50
MSK ++LVVGGT YLGQHLLQ + I G P+ D+A THHS+P P LLDA+
Sbjct: 1 MSKVKILVVGGTCYLGQHLLQVYAHANANANANISGTPFVFDLAFTHHSSPPPHPLLDAI 60
Query: 51 PHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVN 110
P S F VDLK+G GF+A++ FGQPDVVVNCAA+ VPR CE DP +A +IN+PSSLV
Sbjct: 61 PSSLPF-QVDLKTGLGFEAISNTFGQPDVVVNCAAIXVPRACEIDPATAHAINLPSSLVK 119
Query: 111 WLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
WL SF E + LLIHLSTDQVYEG KSFYKEED PVNVYGK+KVAAE+FI E C NFA
Sbjct: 120 WLQSF-EKRTTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENCPNFA 178
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
ILR SIIYGPQT+SPVPKSLP QWID L+K EKVEFF DE RCP+YV+D+V IILALT
Sbjct: 179 ILRCSIIYGPQTVSPVPKSLPNQWIDGALAKVEKVEFFQDEFRCPIYVKDLVNIILALTT 238
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADIS 270
+W+SE KQMQLLLNVGG DRVSRVQMAE VDRGV+SPADIS
Sbjct: 239 QWISEGKQMQLLLNVGGADRVSRVQMAEAVAQFXGYDTSLIKSMSASSVDRGVKSPADIS 298
Query: 271 MDITKLVQTLNIDPVTYKDGVKLTL 295
MDIT+LVQTL I PV++KDGV+LTL
Sbjct: 299 MDITRLVQTLRIHPVSFKDGVRLTL 323
>gi|125584224|gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japonica Group]
Length = 386
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/320 (65%), Positives = 244/320 (76%), Gaps = 24/320 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALAA--GGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV WL SF N
Sbjct: 58 LRSGDGLRAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNVPSSLVTWLLSFG-NDN 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAEKFI E+CSN+AILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+D+V ++L+LT WL++ K +Q
Sbjct: 177 QTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKAVQ 236
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
+LLNVGGPDRVSR+QMAE VDRGV SP DISMDITKL Q L
Sbjct: 237 VLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQML 296
Query: 281 NIDPVTYKDGVKLTLAAEAT 300
I P++++DGV+ TLAAEAT
Sbjct: 297 GIKPISFQDGVRATLAAEAT 316
>gi|242063580|ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
gi|241932910|gb|EES06055.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
Length = 325
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/318 (66%), Positives = 246/318 (77%), Gaps = 24/318 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S + DVA THHS PQ LLDALP S F DL+
Sbjct: 11 RKRVLVVGGSGYLGQHLLAASSAADR--LDVAFTHHSPAPPQPLLDALP-SVRAFRADLR 67
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG G +A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 68 SGDGLEAISASFGQPHVVVNCAAMSVPRACEMDPPAAMATNVPSSLVNWLLSFG-NEDSL 126
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I E+CSN+AILRSSIIYGPQT
Sbjct: 127 LIHLSTDQVYEGVKSFYKEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYGPQT 186
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
ISPV KSLPIQWID VLS+G++VEFF+DE RCPVYV+D+V +IL+LT WLS +++Q+L
Sbjct: 187 ISPVAKSLPIQWIDGVLSQGQQVEFFNDEFRCPVYVKDMVDVILSLTKTWLSNGEKVQVL 246
Query: 243 LNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNI 282
LNVGGPDRVSR+QMAE V+RGV SP DISMDITKL Q L I
Sbjct: 247 LNVGGPDRVSRLQMAESVAVVRGYDPRIIKSVSASSVNRGVASPPDISMDITKLTQILGI 306
Query: 283 DPVTYKDGVKLTLAAEAT 300
P++++DGV+ TL AEA+
Sbjct: 307 KPISFRDGVRSTLDAEAS 324
>gi|115449925|ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group]
gi|48716437|dbj|BAD23044.1| putative dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica
Group]
gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza sativa Japonica Group]
gi|215697942|dbj|BAG92141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 317
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/320 (65%), Positives = 244/320 (76%), Gaps = 24/320 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALAA--GGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV WL SF N
Sbjct: 58 LRSGDGLRAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNVPSSLVTWLLSFG-NDN 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAEKFI E+CSN+AILRSSIIYGP
Sbjct: 117 TLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGP 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
QTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+D+V ++L+LT WL++ K +Q
Sbjct: 177 QTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKAVQ 236
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
+LLNVGGPDRVSR+QMAE VDRGV SP DISMDITKL Q L
Sbjct: 237 VLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQML 296
Query: 281 NIDPVTYKDGVKLTLAAEAT 300
I P++++DGV+ TLAAEA+
Sbjct: 297 GIKPISFQDGVRATLAAEAS 316
>gi|147839168|emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera]
Length = 368
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/370 (58%), Positives = 255/370 (68%), Gaps = 73/370 (19%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQ-------------------------PDVVVNCAALSVPRVCEND 95
L+SG GF+A++ FGQ P VVVNCAA+SVPR CE D
Sbjct: 59 LQSGEGFEAISRSFGQCEEKRYISSFRMFRLVAVKIWGNGKPHVVVNCAAISVPRSCEMD 118
Query: 96 PDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ------------------------- 130
P +AMSINVPSSLV WL SF E+ LLIHLSTDQ
Sbjct: 119 PAAAMSINVPSSLVKWLLSFEESN-TLLIHLSTDQGLINPTETFMREFWIQIDTDMADHP 177
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
VYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GPQ ISPVPKSL
Sbjct: 178 VYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGPQAISPVPKSL 237
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
PIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+L+LN GGPDR
Sbjct: 238 PIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLILNAGGPDR 297
Query: 251 VSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNIDPVTYKDG 290
VSR Q+AE VDRGV+SP DISMDIT+L+QTL+I P + + G
Sbjct: 298 VSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLRVG 357
Query: 291 VKLTLAAEAT 300
++LTL ++A+
Sbjct: 358 IQLTLESQAS 367
>gi|226504976|ref|NP_001150501.1| LOC100284132 [Zea mays]
gi|195639658|gb|ACG39297.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays]
Length = 350
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/317 (65%), Positives = 243/317 (76%), Gaps = 25/317 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 35 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 91
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N ++L
Sbjct: 92 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NDDSL 150
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 151 LIHLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 210
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQL 241
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W +D K++Q+
Sbjct: 211 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKKVQV 270
Query: 242 LLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLN 281
LLNVGGPDRVSR+QMAE V+RGV SP DISMDITKL Q L
Sbjct: 271 LLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQILG 330
Query: 282 IDPVTYKDGVKLTLAAE 298
I P++++DGV+ TL AE
Sbjct: 331 IKPISFQDGVRSTLDAE 347
>gi|194708380|gb|ACF88274.1| unknown [Zea mays]
gi|413939554|gb|AFW74105.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays]
Length = 322
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/317 (65%), Positives = 243/317 (76%), Gaps = 25/317 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQL 241
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W +D K++Q+
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKKVQV 242
Query: 242 LLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLN 281
LLNVGGPDRVSR+QMAE V+RGV SP DISMDITKL Q L
Sbjct: 243 LLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQILG 302
Query: 282 IDPVTYKDGVKLTLAAE 298
I P++++DGV+ TL AE
Sbjct: 303 IKPISFQDGVRSTLDAE 319
>gi|326491931|dbj|BAJ98190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/321 (62%), Positives = 244/321 (76%), Gaps = 23/321 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M ++RVLVVGG+GYLGQHLL L+ +G DVA THH P+ LLDALP F
Sbjct: 1 MERRRVLVVGGSGYLGQHLLAALATGGDGVGVDVAFTHHRGAAPRALLDALP-GVRAFRA 59
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL+SG G +AV+ FGQP V+VNCAA+SVPR CE DP +AM+ NVPSSLV+W SF N
Sbjct: 60 DLRSGDGLEAVSESFGQPHVIVNCAAISVPRACEMDPAAAMATNVPSSLVDWSLSFG-ND 118
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LLIHLSTDQVYEGVKSFYKE DE PVN+YGKSKVAAEKF+ +KCSN+AILRSSIIYG
Sbjct: 119 KTLLIHLSTDQVYEGVKSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYG 178
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
PQT+SPV KSLPIQW+D+VLS+G++V+FF+DE RCPVYV+D+V +IL+LT WLS+ K++
Sbjct: 179 PQTVSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKI 238
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
++LLNVGG DRVSR+QMAE V+RGV SP DISMDITKL QT
Sbjct: 239 RVLLNVGGADRVSRLQMAESVAEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQT 298
Query: 280 LNIDPVTYKDGVKLTLAAEAT 300
L I P+T+ DGV+ TL EA+
Sbjct: 299 LGIKPITFLDGVRATLDTEAS 319
>gi|357137717|ref|XP_003570446.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Brachypodium distachyon]
Length = 326
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 244/322 (75%), Gaps = 26/322 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSE----IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
+KRVLVVGG+GYLGQHLL L+ G DVA THHS P+ LLDALP F
Sbjct: 6 RKRVLVVGGSGYLGQHLLAALASPGGGGGGVDVDVAFTHHSEAAPRQLLDALPR-LRAFR 64
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL+SG G + +A FGQP V+VNCAA+SVPR CE DP +AM+ N+PSSLVNW SF N
Sbjct: 65 VDLRSGDGLEDIAASFGQPHVIVNCAAISVPRACEMDPAAAMATNIPSSLVNWSLSFG-N 123
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++LLIHLSTDQVYEGVKSFYKEEDE PVN+YGKSKVA+EKFI E C N+AILRSSIIY
Sbjct: 124 SKSLLIHLSTDQVYEGVKSFYKEEDETLPVNMYGKSKVASEKFITENCPNYAILRSSIIY 183
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GPQTISPV KSLPIQW+D VLS+ ++V+FF+DE RCPVYV+D+V +ILALT +WLS+ K
Sbjct: 184 GPQTISPVAKSLPIQWMDGVLSQRQQVDFFNDEYRCPVYVKDMVDVILALTKKWLSDGKT 243
Query: 239 MQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQ 278
+Q+LLNVGGPDRVSR+QMAE V+RGV SP+DISMDIT+L Q
Sbjct: 244 IQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVPASSVNRGVASPSDISMDITRLTQ 303
Query: 279 TLNIDPVTYKDGVKLTLAAEAT 300
L I P+T++DGV+ TL AE++
Sbjct: 304 MLGIQPITFQDGVRATLDAESS 325
>gi|413939553|gb|AFW74104.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 326
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/321 (64%), Positives = 244/321 (76%), Gaps = 29/321 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL----SED-K 237
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W S+D K
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHASDDGK 242
Query: 238 QMQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLV 277
++Q+LLNVGGPDRVSR+QMAE V+RGV SP DISMDITKL
Sbjct: 243 KVQVLLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLT 302
Query: 278 QTLNIDPVTYKDGVKLTLAAE 298
Q L I P++++DGV+ TL AE
Sbjct: 303 QILGIKPISFQDGVRSTLDAE 323
>gi|359489754|ref|XP_003633973.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Vitis vinifera]
Length = 301
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/320 (64%), Positives = 240/320 (75%), Gaps = 40/320 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSKKRVLVVGGTGYLGQHLLQG SEI+G P+D+A THHSTP PQ L+ A+PHS F V+
Sbjct: 1 MSKKRVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTP-PQPLVHAIPHSRAF-HVN 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG GF+A++ FGQ DP +AMSINVPSSLV WL SF E+
Sbjct: 59 LQSGEGFEAISRSFGQ-----------------MDPAAAMSINVPSSLVKWLLSFEESN- 100
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI SN+AILRSSII GP
Sbjct: 101 TLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGP 160
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q ISPVPKSLPIQWID VLS+G+K++FF+DE RCPVYV+DVV IILALT W++E KQM+
Sbjct: 161 QAISPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMK 220
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
L+LN GGPDRVSR Q+AE VDRGV+SP DISMDIT+L+QTL
Sbjct: 221 LILNAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTL 280
Query: 281 NIDPVTYKDGVKLTLAAEAT 300
+I P + + GV+LTL ++A+
Sbjct: 281 HISPTSLRVGVQLTLESQAS 300
>gi|224032413|gb|ACN35282.1| unknown [Zea mays]
gi|413939552|gb|AFW74103.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 330
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 244/325 (75%), Gaps = 33/325 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQ----PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
SG GF+A++ FGQ P VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N
Sbjct: 64 SGDGFEAISASFGQVMFQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-N 122
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+++LLI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIY
Sbjct: 123 EDSLLIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIY 182
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL----S 234
GPQTISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W S
Sbjct: 183 GPQTISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHAS 242
Query: 235 ED-KQMQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDI 273
+D K++Q+LLNVGGPDRVSR+QMAE V+RGV SP DISMDI
Sbjct: 243 DDGKKVQVLLNVGGPDRVSRLQMAESVAVVRGYNPSIIKSVSASSVNRGVASPPDISMDI 302
Query: 274 TKLVQTLNIDPVTYKDGVKLTLAAE 298
TKL Q L I P++++DGV+ TL AE
Sbjct: 303 TKLTQILGIKPISFQDGVRSTLDAE 327
>gi|118486138|gb|ABK94912.1| unknown [Populus trichocarpa]
Length = 300
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/317 (64%), Positives = 235/317 (74%), Gaps = 42/317 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHS-TPLPQLLLDALPHSFVFFD 58
M KRVLVVGGTGYLGQH+L LS I + PYD+A T+HS + L + LLDA+PHS F
Sbjct: 1 METKRVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAF-H 59
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL +G GF ++A KFGQ DPD+AMSINVP SLVNWLSSF E
Sbjct: 60 VDLTTGDGFQSIASKFGQ------------------DPDAAMSINVPCSLVNWLSSF-EE 100
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI + N+AILRSSII+
Sbjct: 101 RDTLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIF 160
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GPQTISPV KSLPIQWID VLSK E+VEFFHDE RCPVYV+DVV IIL+L N+W+ E KQ
Sbjct: 161 GPQTISPVQKSLPIQWIDGVLSKKEQVEFFHDEFRCPVYVKDVVTIILSLINKWIIEGKQ 220
Query: 239 MQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQ 278
M+LLLNVGGPDRVSRVQMAE V RGV SPADISMDI+KL+Q
Sbjct: 221 MKLLLNVGGPDRVSRVQMAETVAHVRGYNTSLIKQVSASSVYRGVSSPADISMDISKLIQ 280
Query: 279 TLNIDPVTYKDGVKLTL 295
T++I P +++DGV LTL
Sbjct: 281 TVSISPTSFRDGVILTL 297
>gi|294463471|gb|ADE77265.1| unknown [Picea sitchensis]
Length = 317
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 229/318 (72%), Gaps = 21/318 (6%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M K V+VVGG+GYLG HLLQ L+ + PYD+A T+HS P DA+ F VD
Sbjct: 1 MGKTLVVVVGGSGYLGLHLLQSLATLADNPYDIAFTYHSHLPPPPFFDAI-GPLHAFKVD 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG G D+++ GQP VVVNCAA+SVPR CE +P +A +INVP L+ W+S+F++
Sbjct: 60 LQSGEGLDSISATLGQPHVVVNCAAISVPRACELNPSAATAINVPRPLIKWMSTFSDRGA 119
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTDQVYEGVKSFYKE+DE VN+YGKSKV AE +I S++AILRSSIIYGP
Sbjct: 120 PLLIHLSTDQVYEGVKSFYKEDDETNAVNMYGKSKVMAENYICSNFSSYAILRSSIIYGP 179
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ PV K+LPIQWID VLS G+++EFFHDE RCP+YV+DVV +IL+L +W S DK +Q
Sbjct: 180 HPVIPVEKTLPIQWIDGVLSSGKEIEFFHDEFRCPIYVKDVVNVILSLIRKWNSGDKCIQ 239
Query: 241 LLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTL 280
++LNVGGPDRVSRVQMAE V+RGV SPADISMD++K+V+ L
Sbjct: 240 VVLNVGGPDRVSRVQMAEVVSELKGYDSSSIKSVSAASVNRGVASPADISMDVSKVVKLL 299
Query: 281 NIDPVTYKDGVKLTLAAE 298
I+P +KDGV+LTL ++
Sbjct: 300 GINPTPFKDGVQLTLESQ 317
>gi|42572791|ref|NP_974492.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|124301070|gb|ABN04787.1| At4g00560 [Arabidopsis thaliana]
gi|332656500|gb|AEE81900.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 253
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/235 (70%), Positives = 190/235 (80%), Gaps = 5/235 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
PQT+SP+PK+LPIQWIDS L KG+ V+FFHDE RCP+YV+D+V I L +RW+S
Sbjct: 182 PQTVSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVS 236
>gi|224034499|gb|ACN36325.1| unknown [Zea mays]
Length = 247
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWF 233
>gi|413939555|gb|AFW74106.1| hypothetical protein ZEAMMB73_970124 [Zea mays]
Length = 238
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+KRVLVVGG+GYLGQHLL S ++ DVA THHS PQ LL+ LP S F DL+
Sbjct: 7 RKRVLVVGGSGYLGQHLLAASSTVDR--LDVAFTHHSPAPPQPLLETLP-SVRAFRADLR 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG GF+A++ FGQP VVVNCAA+SVPR CE DP +AM+ NVPSSLVNWL SF N+++L
Sbjct: 64 SGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNVPSSLVNWLLSFG-NEDSL 122
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI LSTDQVYEGVKSFYKEEDE PVN+YGKSKVAAEK I EKCSN+AILRSSIIYGPQT
Sbjct: 123 LIQLSTDQVYEGVKSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQT 182
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
ISPV KSLPIQW+D VLS+G++VEFF DE RCPVYV+D+V +IL+LT W
Sbjct: 183 ISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWF 233
>gi|3047109|gb|AAC13620.1| F6N23.17 gene product [Arabidopsis thaliana]
gi|7267395|emb|CAB80865.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis
thaliana]
Length = 267
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 165/250 (66%), Positives = 190/250 (76%), Gaps = 21/250 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQ---------------WIDSVLSKGEKVEFFHDECRCPVYVRDVVKI 224
PQT+SP+PK+LPIQ +IDS L KG+ V+FFHDE RCP+YV+D+V I
Sbjct: 182 PQTVSPLPKTLPIQVLLNTISQRYIYTLEFIDS-LKKGDTVDFFHDEFRCPIYVKDLVNI 240
Query: 225 ILALTNRWLS 234
L +RW+S
Sbjct: 241 TFKLIDRWVS 250
>gi|168003982|ref|XP_001754691.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694312|gb|EDQ80661.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 208/317 (65%), Gaps = 23/317 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KK +L+VGG+GYLG HLL+ L+ +A T++S P P L+D LP+ F +DL+
Sbjct: 7 KKVILLVGGSGYLGLHLLEDLASPTCD-CTLAYTYNSHPAPAELVDKLPNVLAFH-LDLR 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
SG G ++ G PDV++NCAA+SVPR CE +P++A +INVP+ LV WL+ +
Sbjct: 65 SGEGLQEISKSLGTPDVLINCAAISVPRACEQEPEAAKAINVPTVLVQWLNDLGAAQPPF 124
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LIHLSTDQVY+G KSFY+E+DE PVN YG++KV AEK+I ++AILRSSIIYGPQ
Sbjct: 125 LIHLSTDQVYKGDKSFYEEKDETKPVNTYGETKVMAEKYIQSNYDHYAILRSSIIYGPQP 184
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
P+PK+LP+QWID VLS G +FF DE RCPVYV+DVV+ I L + + M LL
Sbjct: 185 FIPLPKTLPLQWIDGVLSSGSGADFFEDEYRCPVYVKDVVQAIKLLMEKHFCGMRPMYLL 244
Query: 243 LNVGGPDRVSRVQMAE---------------------VDRGVQSPADISMDITKLVQTLN 281
LN+GGPDR+SR MAE V+RGV SP DISMD++K+V LN
Sbjct: 245 LNIGGPDRLSRAAMAETVAQVRGYDTKLVRRVSSQTAVNRGVVSPPDISMDVSKIVAELN 304
Query: 282 IDPVTYKDGVKLTLAAE 298
+ + GV +TL+++
Sbjct: 305 MKMTDFATGVAMTLSSK 321
>gi|218191852|gb|EEC74279.1| hypothetical protein OsI_09525 [Oryza sativa Indica Group]
Length = 290
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 176/221 (79%), Gaps = 21/221 (9%)
Query: 100 MSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAE 159
M+ NVPSSLV WL SF N LLIHLSTDQVYEGVKSFYKE+DE PVN+YGKSKVAAE
Sbjct: 1 MATNVPSSLVTWLLSFG-NDNTLLIHLSTDQVYEGVKSFYKEDDETLPVNMYGKSKVAAE 59
Query: 160 KFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVR 219
KFI E+CSN+AILRSSIIYGPQTISPV KSLPIQW+DSVLS+G++V+FF+DE RCPVYV+
Sbjct: 60 KFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVK 119
Query: 220 DVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE--------------------V 259
D+V ++L+LT WL++ K +Q+LLNVGGPDRVSR+QMAE V
Sbjct: 120 DMVDVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHSIIKSVSASSV 179
Query: 260 DRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT 300
DRGV SP DISMDITKL Q L I P++++DGV+ TLAAEAT
Sbjct: 180 DRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEAT 220
>gi|42572789|ref|NP_974491.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
gi|332656501|gb|AEE81901.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
thaliana]
Length = 201
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/197 (72%), Positives = 160/197 (81%), Gaps = 5/197 (2%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEG---KPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K +VL+VGGTGYLGQHLLQ + G + YDVA THHS+PLP LLDA PHS F V
Sbjct: 4 KTKVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAF-PV 62
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DLKSG G ++++ F QPDVVVNCAALSVPR CE DPDSAMSINVP+SLVNWLSSF NK
Sbjct: 63 DLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNK 122
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LLIHLSTDQVY+GVKSFYKEEDE VNVYGKSKVAAE I +KC +FAILRSSII+G
Sbjct: 123 -TLLIHLSTDQVYQGVKSFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFG 181
Query: 180 PQTISPVPKSLPIQWID 196
PQT+SP+PK+LPIQ I+
Sbjct: 182 PQTVSPLPKTLPIQMIN 198
>gi|302780343|ref|XP_002971946.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii]
gi|300160245|gb|EFJ26863.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii]
Length = 309
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 196/314 (62%), Gaps = 27/314 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVGG+GY+G HLL+ L+ P ++A T++S P P L + L V + VDL +G
Sbjct: 3 VLVVGGSGYVGLHLLKALAA-RYSPENIAYTYNSHPPP--LSEQL---GVGYRVDLTTGQ 56
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G +AL P VVVNCAA+SVPR CE +P AM++NVP +L+ +L+S LL+H
Sbjct: 57 GLQDLALSV-HPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVH 115
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STDQVYEG+K FY E DE PVNVYG SKV AE I N+AILRSSIIYGPQ +
Sbjct: 116 FSTDQVYEGIKQFYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVH 175
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
V K LP+QW+D LS + V+FFHDE RCP+++ DVVK++ L MQL+LN+
Sbjct: 176 VQKPLPVQWMDMALSARKPVDFFHDEYRCPIFIGDVVKVVALLITLSEQSGGAMQLVLNL 235
Query: 246 GGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNIDPV 285
GGP+R+SR +MA+ VDRGV SPADISMD+ KL TL I
Sbjct: 236 GGPERLSRAEMAQVVARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICLT 295
Query: 286 TYKDGVKLTLAAEA 299
+ +GV+ TL A
Sbjct: 296 PFDEGVRQTLMLAA 309
>gi|302791097|ref|XP_002977315.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii]
gi|300154685|gb|EFJ21319.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii]
Length = 309
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 195/314 (62%), Gaps = 27/314 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVGG+GY+G HLL+ L+ P ++A T++S P P L + L V + VDL +G
Sbjct: 3 VLVVGGSGYVGLHLLKALAA-RYSPENIAYTYNSHPPP--LSEQL---GVGYRVDLTTGQ 56
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G +AL P VVVNCAA+SVPR CE +P AM++NVP +L+ +L+S LL+H
Sbjct: 57 GLQDLALSV-HPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVH 115
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STDQVYEG+K FY E DE PVNVYG SKV AE I N+AILRSSIIYGPQ +
Sbjct: 116 FSTDQVYEGIKQFYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVH 175
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
V K LP+QW+D LS V+FFHDE RCP+++ DVVK++ L MQL+LN+
Sbjct: 176 VQKPLPVQWMDMALSARRPVDFFHDEYRCPIFIGDVVKVVALLITLSEQSGGAMQLVLNL 235
Query: 246 GGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNIDPV 285
GGP+R+SR +MA+ VDRGV SPADISMD+ KL TL I
Sbjct: 236 GGPERLSRAEMAQVVARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICLT 295
Query: 286 TYKDGVKLTLAAEA 299
+ +GV+ TL A
Sbjct: 296 PFDEGVRQTLMLAA 309
>gi|224127570|ref|XP_002320107.1| predicted protein [Populus trichocarpa]
gi|222860880|gb|EEE98422.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/195 (73%), Positives = 161/195 (82%), Gaps = 4/195 (2%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEI-EGKPYDVAATHHS-TPLPQLLLDALPHSFVFFD 58
M KRVLVVGGTGYLGQH+L LS I + PYD+A T+HS + L + LLDA+PHS F
Sbjct: 1 METKRVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAF-H 59
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VDL +G GF ++A KFGQP VVVNCAALSVPRVCE DPD+AMSINVP SLVNWLSSF E
Sbjct: 60 VDLTTGDGFQSIASKFGQPHVVVNCAALSVPRVCEKDPDAAMSINVPCSLVNWLSSF-EE 118
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
++ LLIHLSTDQVYEGVKSFYKEEDE PVNVYGKSKVAAE+FI + N+AILRSSII+
Sbjct: 119 RDTLLIHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIF 178
Query: 179 GPQTISPVPKSLPIQ 193
GPQTISPV KSLPIQ
Sbjct: 179 GPQTISPVQKSLPIQ 193
>gi|215697943|dbj|BAG92142.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 172
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 136/171 (79%), Gaps = 20/171 (11%)
Query: 150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH 209
+YGKSKVAAEKFI E+CSN+AILRSSIIYGPQTISPV KSLPIQW+DSVLS+G++V+FF+
Sbjct: 1 MYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFN 60
Query: 210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE----------- 258
DE RCPVYV+D+V ++L+LT WL++ K +Q+LLNVGGPDRVSR+QMAE
Sbjct: 61 DEFRCPVYVKDMVDVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMAESVADVRGYSHS 120
Query: 259 ---------VDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAAEAT 300
VDRGV SP DISMDITKL Q L I P++++DGV+ TLAAEA+
Sbjct: 121 IIKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLAAEAS 171
>gi|384245244|gb|EIE18739.1| methionine adenosyltransferase regulatory beta subunit-related
[Coccomyxa subellipsoidea C-169]
Length = 317
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 179/319 (56%), Gaps = 42/319 (13%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K VLV GG+GYLGQ L+Q L++ + VA THHST P L D + VDL
Sbjct: 6 KPVVLVTGGSGYLGQFLVQALAKAN---FQVAFTHHSTAAPILRGD-----VTAYWVDLV 57
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS--SFTENKE 120
SG G + ++N AA+S P CE DPD+A ++NVPS L++ LS +
Sbjct: 58 SGEGLEQCISSLPSLSAIINTAAISSPGACEKDPDTARAVNVPSKLLDALSVHAGEHGSH 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L IHLSTDQVY+G +S ++EE+ PVN YGK+K+ AEK I E+ N ILRSSIIYGP
Sbjct: 118 PLFIHLSTDQVYDGSRSNWREEEAGNPVNAYGKTKLEAEKLIQERWPNCVILRSSIIYGP 177
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-------ALTNRWL 233
Q+ +PV ++L +Q++ L +G FF+DE R PV+V D+V ++L L+ RW
Sbjct: 178 QSPTPVSRALFLQFVARQLKEGTPTSFFNDEFRNPVFVDDIVSVVLRLLQPGTVLSGRW- 236
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDI 273
L+ N+GGP+R+SRV MA V+RGV SPADISM
Sbjct: 237 ----ACILVYNMGGPERLSRVDMAAKVAEVWGYSPDAIVSAPSSSVNRGVASPADISMTS 292
Query: 274 TKLVQTLNIDPVTYKDGVK 292
KL L + + + ++
Sbjct: 293 RKLETELGLRLTPFSEALQ 311
>gi|307102810|gb|EFN51077.1| hypothetical protein CHLNCDRAFT_141448 [Chlorella variabilis]
Length = 332
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 162/301 (53%), Gaps = 44/301 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ GGTGY GQ ++ + V TH S+ + LP F V+L G
Sbjct: 4 ILITGGTGYFGQFCVEFFA---ASGCQVGYTHWSSGPQRHCGKVLP-----FKVNLAKGE 55
Query: 66 GFDAV--------ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
G +A AL+ V+N AA+S P CE D +A ++NVP+ L+ L+ +
Sbjct: 56 GLEACLQGLTRGGALRL---VAVINAAAISQPAACERDEAAAAAVNVPTHLLAALAWHRQ 112
Query: 118 NK--ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
E LLIH+STDQVY+G K+ ++E D PVN YG++K+AAE+ + N AILRSS
Sbjct: 113 QHGAEPLLIHMSTDQVYDGSKARWREGDPPRPVNAYGRTKLAAERAVAAGWPNHAILRSS 172
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
II+GP+ PV + L +Q+ID L+ G+ FF+DE R P+ VRD++++ L NR +
Sbjct: 173 IIFGPEPPVPVGRPLFLQFIDGALAAGKPTTFFNDEWRSPIRVRDILRVCQTLINR---Q 229
Query: 236 DKQMQLLLNVGGPDRVSR--------------------VQMAEVDRGVQSPADISMDITK 275
D+ L N+GGPDR+SR A V R SPADISMD ++
Sbjct: 230 DELQHRLFNMGGPDRLSRADMAAAVAAACGYDPALILAAPAASVPRPAPSPADISMDSSR 289
Query: 276 L 276
L
Sbjct: 290 L 290
>gi|255084107|ref|XP_002508628.1| predicted protein [Micromonas sp. RCC299]
gi|226523905|gb|ACO69886.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 170/328 (51%), Gaps = 42/328 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYD-------VAATHHSTPLPQLLLDALPHSFVFF 57
RVL+VGG+GYLGQ LL+ L E +P D A ++ P+ L F
Sbjct: 2 RVLIVGGSGYLGQFLLKYLLE---RPEDEVIAVGYTYADENAGPIDHPLTKI--DRCRAF 56
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
VD +G G DA D+VVNCAA+S P CE + + AM++NVP+ L L +
Sbjct: 57 RVDAATGEGMDACVRAMAPLDLVVNCAAMSSPGKCEKEAELAMNLNVPTHLCRTLLEHNQ 116
Query: 118 NKEN---LLIHLSTDQVYEGVKSFYKEE-DEIAPVNVYGKSKVAAEKFIYEK--CSNFAI 171
E LL+HLSTDQVY+G E+ + +PVN YG+SK+ AE I E
Sbjct: 117 KSEAIAPLLVHLSTDQVYDGESPNSVEDVNAPSPVNTYGRSKLNAELHIAENYVAGRHVS 176
Query: 172 LRSSIIYGPQ-TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
LRSSII G Q + PV + L +I + L E V FF DE RCP+ D+V I+AL+
Sbjct: 177 LRSSIITGSQPPLRPVSRPLFHDFIVNSLKGDEAVTFFEDEYRCPIAAVDIVAHIVALS- 235
Query: 231 RWLSEDKQMQLLL--NVGGPDRVSRVQMAE--------------------VDRGVQSPAD 268
+ +D + L+ N+GGPDR+SRV MA VDRGV SPAD
Sbjct: 236 KLAGKDAKTDWLMRYNMGGPDRLSRVDMARQTAEVLGVSDANVEAVSSASVDRGVISPAD 295
Query: 269 ISMDITKLVQTLNIDPVTYKDGVKLTLA 296
ISM KL + P+ +KD ++L L
Sbjct: 296 ISMLSNKLNSLTLVSPMGWKDQMRLALG 323
>gi|159491675|ref|XP_001703785.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270466|gb|EDO96311.1| predicted protein [Chlamydomonas reinhardtii]
Length = 333
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 173/326 (53%), Gaps = 43/326 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ GG+GYLGQ LL G S G +DV + H T + L A P V VDL +G
Sbjct: 3 VLITGGSGYLGQFLLSG-SHFRGL-HDVLSQVHYTYGSRQLASA-PAGVVAHKVDLSTGE 59
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK---ENL 122
G A + VVNCAA+S P +CE PD+A ++NVP+ LV+ L + L
Sbjct: 60 GLTQ-AFEQTPFHAVVNCAAISQPALCETAPDTARAVNVPTHLVDCLLRQEAERGGLRAL 118
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF----AILRSSIIY 178
LIH+STDQV++G ++ +KE++ VNVYGKSK AE+ I + AILRSSIIY
Sbjct: 119 LIHISTDQVFDGSRAHWKEDEAGNQVNVYGKSKYEAEQHILVRTWGHPYPVAILRSSIIY 178
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD---VVKIILALTNRWLSE 235
GP PVP+ L +Q+ +V + + FF DE R PV+VRD + ++++A + L
Sbjct: 179 GPPAPDPVPRPLFLQFASAVSNPDKPTSFFQDEHRSPVHVRDLQRLTELLIAAHGQQLEA 238
Query: 236 ---------DKQMQLLLNVGGPDRVSRVQMAE--------------------VDRGVQSP 266
+ + N GGP+R+SRV MA V RGV SP
Sbjct: 239 LAPGALATVAARRHRVYNAGGPERLSRVDMARQVADCLGCGHGSIESVPSASVARGVVSP 298
Query: 267 ADISMDITKLVQTLNIDPVTYKDGVK 292
DISMDI++L L P +++ ++
Sbjct: 299 PDISMDISRLQSDLGFKPAAFREAIR 324
>gi|302836329|ref|XP_002949725.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f.
nagariensis]
gi|300265084|gb|EFJ49277.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f.
nagariensis]
Length = 227
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 133/235 (56%), Gaps = 30/235 (12%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE--NLLIHLSTDQVYEGVKS 137
VVNCAA+S P VCE+ P+ A S+NVPS L + + + LIH STDQVY+G +
Sbjct: 1 VVNCAAVSQPGVCESSPEVARSVNVPSHLAHCMLDQARRRGLCATLIHFSTDQVYDGSHA 60
Query: 138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
+KE + PVN YGK+K AE+ + + AILR+SIIYGP PV ++L +Q++ S
Sbjct: 61 LWKEGEPCGPVNTYGKTKWEAEQL--PESTPVAILRASIIYGPPPPDPVNRALFLQFVAS 118
Query: 198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
+ + FF DE R P+YVRD+ +++ L W + NVGGP+R+SRV MA
Sbjct: 119 AVRGSQPTAFFEDEWRSPIYVRDLERLVTRLLAPW------QHRIFNVGGPERLSRVDMA 172
Query: 258 E--------------------VDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 292
V+RGV SPADISMD+++L L+ +++ +K
Sbjct: 173 RQVADALGCGYDAILATSTASVNRGVASPADISMDVSRLTDGLHFRTTPFREALK 227
>gi|303289653|ref|XP_003064114.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454430|gb|EEH51736.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 340
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 163/294 (55%), Gaps = 32/294 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLVVGG+GYLGQ +L+ S+ V T+ ST LP D + H++ +VDL +G
Sbjct: 2 RVLVVGGSGYLGQFVLKAFSDAYPDTEWVGYTYKSTKLPIPPEDDV-HAY---EVDLATG 57
Query: 65 SGFDAV---ALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-K 119
G DA A K G+ D++VNCAA S P CE + +A ++NVPS L++ +++ +E
Sbjct: 58 EGADACIADATKGGESLDLIVNCAAASSPGWCEKNETAATALNVPSKLLDAMTAASETIG 117
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
E LLIH+STDQVY G + E+ A PVN Y +SK+ E+ + ++ + I R SII
Sbjct: 118 EPLLIHMSTDQVYGGDERRSTEDQCPANPVNAYARSKLKGEEEVAKRWAKHVIFRPSIIT 177
Query: 179 GPQ-TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
GPQ +PV + L + +I L + V FF DE R PV D+V + + +D
Sbjct: 178 GPQPPYAPVNRPLFLDFIVDALKGTKPVGFFVDEWRSPVCAHDIVGHVKIFAD--RRDDL 235
Query: 238 QMQLLLNVGGPDRVSRVQM-------------------AEVDRGVQSPADISMD 272
+ L N GGPDR+SRV M A VDRG+ SPADISMD
Sbjct: 236 PRRRLFNCGGPDRLSRVDMALKVAAALGLSGAFSYSHCASVDRGLVSPADISMD 289
>gi|428169456|gb|EKX38390.1| hypothetical protein GUITHDRAFT_115530 [Guillardia theta CCMP2712]
Length = 331
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 151/302 (50%), Gaps = 38/302 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYD----VAATHHSTPLPQLLLDALPHSFVFFDVD 60
RVLV G +GYLGQ LL + D A T S +P + +D
Sbjct: 10 RVLVTGASGYLGQFLLDAIQAHNAGNQDPSIVCAGTFGSRA------GGIPANMTGIQMD 63
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S S F +PDVVVN AA+S P CE + A +INVP++L++ L +
Sbjct: 64 MTSASSIHKGVEDF-RPDVVVNLAAMSAPAACEKQQEEAEAINVPTALLDAL--LQVKSD 120
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L + +STDQ+++G Y EE + PVN YGK+K+ E+ + ++ N ILRSS+IYGP
Sbjct: 121 ALFVQVSTDQIFDGQHPVYDEESDALPVNQYGKTKLRFEQVLRDRWPNHVILRSSLIYGP 180
Query: 181 QTISPVPKSLP-IQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSE 235
++ +Q++D L+K + V F DE RCP+YV DVV I+L + +
Sbjct: 181 NPPRECVRTGSFLQFLDESLAKATAEQPVSLFGDEVRCPIYVNDVVAILLVFILHAKECM 240
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEV---------DR-----------GVQSPADISMDITK 275
+ L++GGP+R+SRV M E+ DR G SP DISM K
Sbjct: 241 SAPLTRTLSMGGPERLSRVAMGEIVSSIRGYSSDRIKSVRRAELQLGFTSPLDISMRSDK 300
Query: 276 LV 277
L
Sbjct: 301 LT 302
>gi|307103361|gb|EFN51622.1| hypothetical protein CHLNCDRAFT_140037 [Chlorella variabilis]
Length = 311
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 45/315 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ VLV G +GYLGQ +++ + GK + V T+ + P+ F VD
Sbjct: 1 MAQPAVLVTGASGYLGQFVVEWYA---GKGWKVGCTYRTGEAPKFG-----SGVQVFRVD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTENK 119
L SG G G V+NCAA + P CE + ++A ++NVP
Sbjct: 53 LGSGEGLHEGCDALGPLAAVINCAAQAAPAACEGEGEAAARAVNVP-------------- 98
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ +L+H+STD VY+G SFY+E+ E+ PVN YG++K E + + ILR SII+G
Sbjct: 99 QPVLVHISTDHVYDGGSSFYREDAELRPVNTYGRTKADGEAEVALRWRRHVILRPSIIFG 158
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV--VKIILALTNRWLSEDK 237
P +P+ + +Q++DS L+ + FF DE R P YV+D+ L
Sbjct: 159 PPPPNPIRRGQFLQFVDSCLAAQKPSTFFTDEWRTPTYVKDLVAACAAAVDACDALPAAP 218
Query: 238 QMQLLLNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLV 277
+ NVGGP R++R+ M A V R +PADISMD + +
Sbjct: 219 PHARVFNVGGPARINRLDMALAVAEVRGHDPALALPGSAAAVARTCATPADISMDTSAVE 278
Query: 278 QTLNIDPVTYKDGVK 292
L + + + ++
Sbjct: 279 AVLGVRMTPFTEALR 293
>gi|397575899|gb|EJK49954.1| hypothetical protein THAOC_31118 [Thalassiosira oceanica]
Length = 361
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 159/365 (43%), Gaps = 107/365 (29%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVL+ G +GY+GQHL++ LS G D LP++ L + F+ D++
Sbjct: 5 KRVLLTGASGYVGQHLIESLSTGTGAGED---------LPRMELYCCYNDLSTFEQDMRE 55
Query: 64 GSGFD---------------AVALKFGQP--------------DVVVNCAALSVPRVCEN 94
G + + F P D +V+ AALS P CEN
Sbjct: 56 AFGEEMSLSSDSKPKIRIQVVSGINFADPGYISRITNCCGDRFDCIVHLAALSSPTHCEN 115
Query: 95 DPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKS 154
PD A IN P L+++ + +I+LSTDQVYEG+KSFY E D PVNVYG++
Sbjct: 116 HPDDAWKINCPVDLLSFKAP--------IIYLSTDQVYEGLKSFYSESDRTVPVNVYGRT 167
Query: 155 KVAAEKFI----------------------------YEKCSNFAILRSSIIYGPQTISPV 186
K+A E+ + + N LRSS+I GP PV
Sbjct: 168 KLAFERVLLRDGGDSSPLLSVDEAREDTERIPRAIEHTAAPNSVCLRSSLILGP----PV 223
Query: 187 P------KSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
P K IQ+I S L ++ +E R V+++DVV+ IL + LS ++Q
Sbjct: 224 PLRNGCRKGFDTFIQFISSRLESAAPTVYYTNEYRSVVHIKDVVRAILHFLSIALSNNEQ 283
Query: 239 M-QLLLNVGGPDRVSRVQMA---------------EVDR-----GVQSPADISMDITKLV 277
+ N+GG R SR +A +R GV SP DISMD+ KL
Sbjct: 284 KGSQVYNLGGTTRASRYDIALAVASQLKLDPASANGAERSVTTGGVASPPDISMDVHKLE 343
Query: 278 QTLNI 282
L +
Sbjct: 344 AELGM 348
>gi|145355883|ref|XP_001422176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582416|gb|ABP00493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 261
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 38/253 (15%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN---LLIHLSTDQVYEGVK 136
V+NCAA+S P CE P+ A N P +L + +SS +++ L I LSTD VY+G +
Sbjct: 10 VINCAAMSSPGQCEAAPELARRANAPRALWSAISSIAQSRGKQAPLWIQLSTDHVYDGER 69
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT-ISPVPKSLPIQWI 195
+ E APVN YG SKV E+ + + +LRSSII GP+ ++ V ++L + +I
Sbjct: 70 ALSDESTACAPVNAYGASKVFCEETLAKDYPRSIVLRSSIITGPKAPLTDVERTLFLDFI 129
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
S +K F+ DE R P+ V D+V+++ L R +D + + N+GGPDRVSRV
Sbjct: 130 ASSFAKETPTTFYDDEFRSPICVFDIVRVVRTLLQR--HDDLPDRRVYNMGGPDRVSRVD 187
Query: 256 M------------------------------AEVDRGVQSPADISMDITKLVQTLNID-- 283
M A+ RGV +P DISMD LV+ + D
Sbjct: 188 MANGVAEFLAKGDAAMEQVFKSKIAVASCAEAKALRGVAAPPDISMDSRALVREICQDWA 247
Query: 284 PVTYKDGVKLTLA 296
P ++++ + + A
Sbjct: 248 PRSFEEQIAVAFA 260
>gi|423346321|ref|ZP_17324009.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
gi|409221119|gb|EKN14072.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
Length = 296
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 44/312 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G++G+ +L LSE G + H P+ H+FV D++
Sbjct: 2 KKILVIGANGFVGRRILDNLSE-NGACEVFGCSLHPDIRPEG-----NHTFVRLDIN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV F PDVVVNC+ALSVP CE + A +INV S V L+ E++ +
Sbjct: 53 --DYPAVEALFDHICPDVVVNCSALSVPDYCEQHREEAYAINV--SAVENLAYCCEHQGS 108
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIHLSTD V++G Y EED AP+N YG +K E+ + C N+AI+R ++YG
Sbjct: 109 RLIHLSTDFVFDGRSDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN---- 230
K+LP +Q + + L G+++ D+ R P +V D+ + L +
Sbjct: 168 -------KALPGQHGNVLQLVKNRLEAGQEIRVVADQYRTPTWVEDIADGVERLVHTDDS 220
Query: 231 --------RWLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTL 280
+LS + + + G DR + V E+ P + + I K + L
Sbjct: 221 GIYHICGAEYLSIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIEKAKREL 280
Query: 281 NIDPVTYKDGVK 292
P T ++G+K
Sbjct: 281 GYRPHTLEEGLK 292
>gi|308813466|ref|XP_003084039.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus
tauri]
gi|116055922|emb|CAL58455.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus
tauri]
Length = 319
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 1 MSKKRV--LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
M+ +RV V+G GYLGQ + L+ +DV + + +DA
Sbjct: 1 MATERVAACVLGADGYLGQFIALDLAH--SGAFDVVHACGRSGDEAIDVDAPSTLRRTSA 58
Query: 59 VDLKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
D S + + + + P VVVNCAA+S P CE +P++A N P L N + +
Sbjct: 59 CDFASIASCENIVRELFDYGATPRVVVNCAAMSAPGACERNPEAAKLANAPRFLWNAVKA 118
Query: 115 FTENKE---NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
+ + I LSTD VY+G E + APVN YG SKV E + + A
Sbjct: 119 EALTRSVQVPMWIQLSTDHVYDGRSPLSDESTKTAPVNAYGASKVFCEDALVQDLGARAV 178
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+LRSSII GP+ L E+ F+ DE R PV V D+ I+ +L
Sbjct: 179 VLRSSIITGPKP---------------PLKDDEQTSFYEDEFRSPVCVHDICHIVRSLAT 223
Query: 231 RWLSEDKQMQLLLNVGGPDRVSRVQM------------AEVD------------------ 260
R + + N+GGPDRVSRV M AE++
Sbjct: 224 R--AGPSPTLRVYNMGGPDRVSRVDMANGVAEYLASGDAELESVYKSKIARASCTEARAL 281
Query: 261 RGVQSPADISMDITKLVQTLNID--PVTYKDGV 291
RGV +P DISMD + L++ + D P ++ D +
Sbjct: 282 RGVDAPPDISMDSSALIRDICRDWSPRSFSDQI 314
>gi|412986107|emb|CCO17307.1| predicted protein [Bathycoccus prasinos]
Length = 386
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 166/370 (44%), Gaps = 91/370 (24%)
Query: 6 VLVVGGTGYLGQHLLQGL----SEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
VLV GG+GYLGQ L++ L EI Y ++ S+ LP+ + + V D
Sbjct: 3 VLVSGGSGYLGQFLIERLLTLNKEINAVHYTCSS--ESSKLPESVHEQHKRRLVCHVCDF 60
Query: 62 KSGSGFDAVALKFGQPD---------VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
++G+G + K + + +VVNC ALS P+ CE + + A IN P+ L L
Sbjct: 61 ETGAGVEECVEKASKGEYLEGNKNLKLVVNCTALSQPKQCEENEEKARKINAPTHLCEAL 120
Query: 113 ----SSFTENKENLLIHLSTDQVYEGVKSFYKEED----EIAPVNVYGKSKVAAEKFIYE 164
+E + LL+H+STDQV+ G S +E+D P+N YG+SK AE ++ E
Sbjct: 121 MRKYGKGSEERVPLLVHMSTDQVFCGSYSNTREDDAREKAFEPINAYGRSKKYAESYLLE 180
Query: 165 KCSNFA--ILRSSIIYGPQ-TISPVPKSLPIQWIDSVL--------SKGEK--------- 204
A ILRSS+I GPQ V + L + +I ++GE+
Sbjct: 181 NYDKNALVILRSSVITGPQPPYRRVDRPLFLDFIAKTCPPNTRGQSAEGEEKEEVKDENA 240
Query: 205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL----------------LLNVGGP 248
VEF+ DE R PV D+ + I+ ++ ++ + + + GGP
Sbjct: 241 VEFWTDEFRNPVSRIDLTEAIVYCFEIFVGLRRKRDVSAFLFEEGGGSSDSTPIYHAGGP 300
Query: 249 DRVSRVQM---------AEVDRG----------------VQSPADISMDITKLVQTLNID 283
+R+SR M A R V++PADISMD TK + L
Sbjct: 301 ERLSRYDMVTIFCNTMRASKKRAKPAEKSKTTSSSAAAVVKTPADISMDSTKFMTVL--- 357
Query: 284 PVTYKDGVKL 293
++GV+L
Sbjct: 358 ----RNGVQL 363
>gi|154489857|ref|ZP_02030118.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC
43184]
gi|423722878|ref|ZP_17697031.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
gi|154089299|gb|EDN88343.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae ATCC
43184]
gi|409242151|gb|EKN34916.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
Length = 296
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 148/312 (47%), Gaps = 44/312 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G++G+ +L LSE G + H P H+ V D++
Sbjct: 2 KKILVIGANGFVGRRILDNLSE-NGACEVFGCSLHPDIRP-----GGNHTSVRLDIN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV F PDVVVNC+ALSVP CE + A +INV S V L+ E++ +
Sbjct: 53 --DYPAVEALFDHICPDVVVNCSALSVPDYCEQHREEAYAINV--SAVENLAYCCEHQGS 108
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIHLSTD V++G Y EED AP+N YG +K E+ + C N+AI+R ++YG
Sbjct: 109 RLIHLSTDFVFDGRSDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN---- 230
K+LP +Q + + L G+++ D+ R P +V D+ + L +
Sbjct: 168 -------KALPGQHGNVLQLVKNRLEAGQEIRVVADQYRTPTWVEDIADGVERLVHTDDS 220
Query: 231 --------RWLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTL 280
+LS + + + G DR + V E+ P + + I K + L
Sbjct: 221 GIYHICGAEYLSIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIEKAKREL 280
Query: 281 NIDPVTYKDGVK 292
P T ++G+K
Sbjct: 281 GYRPHTLEEGLK 292
>gi|409101326|ref|ZP_11221350.1| dTDP-4-dehydrorhamnose reductase [Pedobacter agri PB92]
Length = 302
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 46/314 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L G G LGQ + + + EG+ VA + P + H + + ++D+
Sbjct: 2 KTILTTGSNGLLGQKITEKVLA-EGRVKLVATSRGFNRYP------VSHGYEYAEMDI-- 52
Query: 64 GSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D ++F QPDV+++ AA++ E +S +NV S V L S E K
Sbjct: 53 ---LDVAQVRFVIERYQPDVIIHTAAMTNVDTAEASKESCYELNV--SAVKTLLSLCEEK 107
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V++G YKEED + PV+ YGKSKV AE+ + +N+AILR+ ++YG
Sbjct: 108 NIQLIHLSTDFVFDGANGPYKEEDAVNPVSYYGKSKVLAEELLKTSTANWAILRTILVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S + W L KG+ + +D+ R P D+ + L L+ +K
Sbjct: 168 --ITNDMSRSNIVLWAKGALEKGQPINVVNDQWRMPTLAEDLAEACL------LAVEKNA 219
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
Q + +V G D +S + +++ + P + K ++
Sbjct: 220 QGIYHVSGKDYMSIADLVRKVADYWSLDKSIISEISSDSLNQTAKRPVKTGFVLDKTIRD 279
Query: 280 LNIDPVTYKDGVKL 293
L+ P ++++G+K+
Sbjct: 280 LDYKPHSFEEGLKM 293
>gi|313146992|ref|ZP_07809185.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12]
gi|313135759|gb|EFR53119.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12]
Length = 296
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 116/223 (52%), Gaps = 22/223 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALP-HSFVFFDVDL 61
K +L++G G+ G+ +L LS KP Y+V L D P + F D+
Sbjct: 2 KNILIIGANGFTGRRILNDLS---AKPIYNVTGC-------SLRDDICPGKGYRFVRTDI 51
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 52 RDT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQY 106
Query: 120 ENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++Y
Sbjct: 107 GSRFIHLSTDFVFDGKSNQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVY 166
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
G L Q + + L KGE + D+ R P +V D+
Sbjct: 167 GKALTGQHGNIL--QLVANRLRKGEPIRVVSDQWRTPTFVGDI 207
>gi|424663389|ref|ZP_18100426.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 616]
gi|404577079|gb|EKA81817.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 616]
Length = 297
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 20/222 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS A + ++ L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS---------AKSIYNVTGCSLRDDICPGKGYRFVRTDIR 52
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 53 DT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQYG 107
Query: 121 NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++YG
Sbjct: 108 SRFIHLSTDFVFDGKSNQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
L Q + + L KGE + D+ R P +V D+
Sbjct: 168 KALTGQHGNIL--QLVANRLRKGETIRVVSDQWRTPTFVGDI 207
>gi|237718115|ref|ZP_04548596.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4]
gi|229452536|gb|EEO58327.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4]
Length = 303
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 34/239 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ +L LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRL 220
>gi|423277199|ref|ZP_17256113.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 610]
gi|404587675|gb|EKA92214.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 610]
Length = 297
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 20/222 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS A + ++ L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS---------AKSIYNVTGCSLRDDICPGKGYRFVRTDIQ 52
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DAV F QPD+V+N +ALSVP CE A + NV + V +S E
Sbjct: 53 DT---DAVQRLFNESQPDIVINTSALSVPDYCETHHAEAEATNVTA--VETISHACEQYG 107
Query: 121 NLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V++G + YKEEDE +PVN YG +K+ AEK + + CSN+AI+R ++YG
Sbjct: 108 SRFIHLSTDFVFDGKSNQLYKEEDETSPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYG 167
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
L Q + + L KGE + D+ R P +V D+
Sbjct: 168 KALTGQHGNIL--QLVANRLRKGETIRVVSDQWRTPTFVGDI 207
>gi|383111495|ref|ZP_09932305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2]
gi|313696786|gb|EFS33621.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2]
Length = 303
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 120/232 (51%), Gaps = 34/232 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ +L LS K Y V L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLSAC--KQYKVTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVKHL-FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEEDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+YG K+LP +Q + + L G+++ D+ R P YV DV
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 213
>gi|329963485|ref|ZP_08301014.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT
12057]
gi|328528656|gb|EGF55620.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT
12057]
Length = 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
+K+VL++G G+ G+ +L LS Y V L D P S + F D
Sbjct: 20 RKKVLIIGANGFTGRRVLDDLSR--NIAYRVTGC-------SLHDDICPGSGDYHFVRTD 70
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + + + +PDVVVN +ALSVP CE + A +IN+ + V+ L+ + +
Sbjct: 71 ICDNNALEKL-FEAVRPDVVVNTSALSVPDYCETHHEEADAINITA--VSRLAEYCRMHD 127
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ IHLSTD V+ G Y EED PVN YG +K+ EK I C N+AI+R ++YG
Sbjct: 128 SRFIHLSTDFVFSGNTDRLYTEEDTPGPVNYYGHTKLEGEKRITAICENYAIVRVVVVYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-------- 231
P +Q + L E++ D+ R P YV D+ + + L NR
Sbjct: 188 AAL--PGQHGNILQLVADRLRNNEEIFVVSDQWRTPTYVGDISQGVEKLINRPRNGIYHI 245
Query: 232 ----WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
L+ + + ++ G DR + V E++ P + I K + L P
Sbjct: 246 CGSDCLTIADMARRVADLLGLDRSLIRPVTTKEMNEKTPRPRFSGLSIEKACRELGYQPH 305
Query: 286 TYKDGVKLTLA 296
T ++G+K+
Sbjct: 306 TLEEGMKIMFG 316
>gi|294646105|ref|ZP_06723768.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC
2a]
gi|294808300|ref|ZP_06767058.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides
xylanisolvens SD CC 1b]
gi|345510055|ref|ZP_08789633.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1]
gi|292638549|gb|EFF56904.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC
2a]
gi|294444519|gb|EFG13228.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides
xylanisolvens SD CC 1b]
gi|345454629|gb|EEO51200.2| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1]
Length = 310
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 31/234 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCS 167
+ IHLSTD V++G K F Y EED APVN YG +K E+ + E CS
Sbjct: 110 SRFIHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCS 168
Query: 168 NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+FAI+R +I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 169 SFAIIRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 220
>gi|423213762|ref|ZP_17200291.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens
CL03T12C04]
gi|392693419|gb|EIY86651.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens
CL03T12C04]
Length = 303
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 22/226 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRL-FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVY-----EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V+ E Y EED APVN YG +K E+ + E CS++AI+R +
Sbjct: 110 SRFIHLSTDFVFDEKINEDAGLLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVA 169
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 170 IVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 213
>gi|293369744|ref|ZP_06616320.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD
CMC 3f]
gi|292635166|gb|EFF53682.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD
CMC 3f]
Length = 303
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 34/239 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVSHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRL 220
>gi|223999833|ref|XP_002289589.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974797|gb|EED93126.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 387
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 165/377 (43%), Gaps = 113/377 (29%)
Query: 4 KRVLVVGGTGYLGQHLL-----QGL-------SEIEGKP----------YDVAATHHSTP 41
K++L+ G +GY+GQH++ GL S++ P Y+V ++S
Sbjct: 8 KKILITGSSGYVGQHMISHIGIHGLVVQAPSSSDVNASPLSPSASVNQRYEVYCAYNS-- 65
Query: 42 LPQL------LLDALPHSFVFFDVDLKSGSGFDAVALKF---------GQPDVVVNCAAL 86
LP L + H V ++S S D + G DV+++ AAL
Sbjct: 66 LPNFEDDISNLFNGTAHKLHPSIVKMQSVSNIDFRNPNYIHKIQQACGGTVDVIIHLAAL 125
Query: 87 SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIA 146
S P CE+ + A IN P L++ + ++++STDQVYEG K FY E DE
Sbjct: 126 SSPFYCESHAEEAWKINCPVELLSLKAP--------IMYMSTDQVYEGTKQFYGENDETV 177
Query: 147 PVNVYGKSKVAAEK------------------------FIYEKCSN-------FAILRSS 175
PVNVYG++K+A E+ F+ SN ILRSS
Sbjct: 178 PVNVYGRTKLAFERILLGGLGSSTLLTAKELGSSTLPEFLTNVISNNLRPHNKSVILRSS 237
Query: 176 IIYGPQTISPVP----KSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+I G T P P K P +Q+I+ L ++F +E R V++ DV+ I
Sbjct: 238 LILGKPT--PFPNGCRKGFPSFLQFIEDRLKNQISTDYFVNEYRSVVHLEDVIGSIRHFV 295
Query: 230 NRWLS------EDKQMQLLLNVGGPDRVSRVQMAE---------------VDR-----GV 263
+ LS D+ +Q + N+GG RVSR ++A V+R GV
Sbjct: 296 LKALSPNDDTAADEGVQ-VFNLGGSTRVSRYELATFVATHLNTDSTAVNGVNRPKEGGGV 354
Query: 264 QSPADISMDITKLVQTL 280
SP DISM++ KL + L
Sbjct: 355 PSPPDISMNVDKLAREL 371
>gi|423296281|ref|ZP_17274366.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL03T12C18]
gi|392670891|gb|EIY64369.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL03T12C18]
Length = 303
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 34/239 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRL 220
>gi|336413563|ref|ZP_08593915.1| hypothetical protein HMPREF1017_01023 [Bacteroides ovatus
3_8_47FAA]
gi|335938607|gb|EGN00497.1| hypothetical protein HMPREF1017_01023 [Bacteroides ovatus
3_8_47FAA]
Length = 303
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 34/239 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D APVN YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRL 220
>gi|160884444|ref|ZP_02065447.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483]
gi|299146002|ref|ZP_07039070.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23]
gi|423286494|ref|ZP_17265345.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL02T12C04]
gi|156110183|gb|EDO11928.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus ATCC
8483]
gi|298516493|gb|EFI40374.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23]
gi|392675181|gb|EIY68623.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus CL02T12C04]
Length = 303
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 34/239 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K++L++G G+ G+ ++ LS K Y + L D LP++ + F + D
Sbjct: 2 KKILIIGANGFTGRQIVNDLSAC--KQYKLTGC-------SLHPDILPNNAEDYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRNEADVRHL-FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTA--VGQLADLCEEYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+D AP+N YG +K E+ + E CS++AI+R
Sbjct: 110 SRFIHLSTDFVFDGKINEAAGLLYTEKDLPAPINYYGYTKWKGEERVTETCSSYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+YG K+LP +Q + + L G+++ D+ R P YV DV +L L
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRL 220
>gi|336401989|ref|ZP_08582734.1| hypothetical protein HMPREF0127_00047 [Bacteroides sp. 1_1_30]
gi|335948711|gb|EGN10413.1| hypothetical protein HMPREF0127_00047 [Bacteroides sp. 1_1_30]
Length = 310
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 120/234 (51%), Gaps = 31/234 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS T + L D LP+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCS 167
+ IHLSTD V++G K F Y EED APVN YG +K E+ + E CS
Sbjct: 110 SRFIHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDIPAPVNYYGYTKWKGEEKVAETCS 168
Query: 168 NFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
++AI+R +I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 169 SYAIVRVAIVYGRAL--PGQHGNIVQLVMNRLKTGQEIRVVSDQWRTPTYVGDV 220
>gi|325105059|ref|YP_004274713.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145]
gi|324973907|gb|ADY52891.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145]
Length = 302
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 38/310 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LGQ L + ++ K +++ AT T + +++ ++D+
Sbjct: 2 KKILVTGSNGLLGQKLTDAV--LKNKQFELIATGKGTNR-----HPVKEGYIYEEMDIID 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ K QPD ++N AA++ CE + +NV + V +L L
Sbjct: 55 KESIAFIVNKH-QPDAIINTAAMTNVDTCETQREECWLLNVTA--VEYLIDICRENSIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD +++G Y EE + P++ YG+SK+AAE+ + + ++AILR+ I+YG +
Sbjct: 112 IHLSTDFIFDGEDGPYTEEGQPNPLSYYGESKLAAEQLLEKSGIHYAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ + +S I W L KG + +D+ R P D+ I L L+ +K+ Q +
Sbjct: 170 NDMSRSNIILWAKGALEKGNPINVVNDQWRMPTLAEDLADICL------LAVEKEAQGVY 223
Query: 244 NVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNID 283
N G D +S +++ E +++ + P + K ++ L +
Sbjct: 224 NASGKDLMSIIELVERVADYYGLDKSLIKPISSTTLNQAAKRPKRTGFILDKSIRELGYN 283
Query: 284 PVTYKDGVKL 293
P ++++G+++
Sbjct: 284 PHSFEEGIRI 293
>gi|428297384|ref|YP_007135690.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 6303]
gi|428233928|gb|AFY99717.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 6303]
Length = 289
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 135/253 (53%), Gaps = 30/253 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG H+ Q +++ E + Y +HHS +P + L VDL
Sbjct: 2 KKLLITGASGFLGWHICQ-ITQQEWQVYGTYYSHHSE-IPGIKLQ---------KVDL-- 48
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F A+ F PD V++ AALS P C+N P + +INV +S + ++ + +
Sbjct: 49 -TDFQALKQLFHDIHPDAVIHTAALSQPNFCQNHPQESAAINVTAS--SNIAGLCADAQI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
STD V++G+ + YKE D + PVN+YG+ KV AE+ + +I R +++G
Sbjct: 106 PCAFTSTDLVFDGLNAPYKESDSVNPVNIYGEQKVLAEREMLAIYPQISICRMPLMFGAA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P KS +Q + L G+++ F DE R PV + + I++AL K+ Q
Sbjct: 166 T--PTSKSF-MQGFIATLKAGKELNLFIDEFRTPVSGKTAAQGILIAL--------KKSQ 214
Query: 241 LLLNVGGPDRVSR 253
++++GG +R+SR
Sbjct: 215 GIIHLGGKERISR 227
>gi|380695557|ref|ZP_09860416.1| dTDP-4-dehydrorhamnose reductase [Bacteroides faecis MAJ27]
Length = 302
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K +L++G G+ G+ +L LS E Y+V L D LP+ + F D
Sbjct: 2 KNILIIGANGFTGRQILNDLSNKE--QYNVTGC-------SLHPDILPNGDGKYHFVTTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPD V+NC+ALSVP CE + A NV + V L+ E +
Sbjct: 53 IRDEAAIKHL-FKEAQPDAVINCSALSVPDYCETHHEEAYLTNVTA--VEQLAYLCEIYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EE APVN YG +K E I E CSN+AI+R
Sbjct: 110 SRFIHLSTDFVFDGKIDENSGQLYTEESLPAPVNYYGFTKWKGENRIAEICSNYAIVRVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDV 213
>gi|428225024|ref|YP_007109121.1| dTDP-4-dehydrorhamnose reductase [Geitlerinema sp. PCC 7407]
gi|427984925|gb|AFY66069.1| dTDP-4-dehydrorhamnose reductase [Geitlerinema sp. PCC 7407]
Length = 305
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 136/256 (53%), Gaps = 23/256 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++ +LV G +G+LG +L Q ++ + V T+ + P+ ++ P VDL
Sbjct: 14 QETLLVTGASGFLGWNLCQQAAQR----WRVVGTYGAHPVAIAGVEMRP-------VDL- 61
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ G A + QP V++ AA S P +C+ P+ + INV ++++ L+ ++
Sbjct: 62 TDEGAIAALMASVQPAAVIHLAAQSSPNICQRSPEVSHRINVDAAVL--LAKLCADRAIP 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G +S Y+E D + P++VYG+ K AE+ I A+ R +++G
Sbjct: 120 LVFTSTDLVFDGRRSPYREADPVNPISVYGEQKAIAEEKILSLYPRAAVCRMPLMFG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
PV KS +QW+ L G+++ F DE R PV R V+ +L L+ + + L
Sbjct: 178 AGPVAKSF-LQWMLETLRSGQELALFTDEFRTPVSGRAAVQGLL------LALQQGVSGL 230
Query: 243 LNVGGPDRVSRVQMAE 258
L++GGP+R++R + +
Sbjct: 231 LHLGGPERIARYEFGQ 246
>gi|423225562|ref|ZP_17212029.1| dTDP-4-dehydrorhamnose reductase [Bacteroides cellulosilyticus
CL02T12C19]
gi|392632490|gb|EIY26450.1| dTDP-4-dehydrorhamnose reductase [Bacteroides cellulosilyticus
CL02T12C19]
Length = 299
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 113/230 (49%), Gaps = 15/230 (6%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDL 61
KK+VLV+G G+ G+ +L LS Y V H P D+ + F+ D+
Sbjct: 2 KKKVLVIGANGFTGRRILNDLSR--NDEYIVTGCSLHDDIAP----DSGNYRFISADI-- 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
G + + +P++V+N +ALSVP CE D A SINV + V L+ E
Sbjct: 54 -CQMGEQSALFREVRPNIVINTSALSVPDYCEAHRDEADSINV--NAVGQLAFRCEASAA 110
Query: 122 LLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V+ G Y EED PVN YG +K+ EK + E CSN+AI R ++YG
Sbjct: 111 RFIHLSTDFVFNGDTGQLYTEEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGA 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
P +Q + + L E++ D+ R P YV DV + I L N
Sbjct: 171 AL--PGQHGNILQLVANRLRNNEEIRVVSDQWRTPTYVGDVSQGIEKLIN 218
>gi|53713484|ref|YP_099476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46]
gi|423271451|ref|ZP_17250421.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T00C42]
gi|423275644|ref|ZP_17254588.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T12C13]
gi|52216349|dbj|BAD48942.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46]
gi|392697147|gb|EIY90333.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T00C42]
gi|392701311|gb|EIY94470.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL05T12C13]
Length = 296
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 28/226 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G + YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
K+LP +Q + + L GE + D+ R P +V D+
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDI 207
>gi|60681728|ref|YP_211872.1| rhamnose biosynthesis-like protein [Bacteroides fragilis NCTC 9343]
gi|375358590|ref|YP_005111362.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis 638R]
gi|383118456|ref|ZP_09939198.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5]
gi|423250090|ref|ZP_17231106.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|423255590|ref|ZP_17236519.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|423257426|ref|ZP_17238349.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T00C01]
gi|423265607|ref|ZP_17244610.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T12C05]
gi|423285706|ref|ZP_17264587.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 615]
gi|60493162|emb|CAH07943.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis NCTC 9343]
gi|251945752|gb|EES86159.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5]
gi|301163271|emb|CBW22821.1| putative rhamnose biosynthesis-related protein [Bacteroides
fragilis 638R]
gi|387777794|gb|EIK39890.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T00C01]
gi|392651235|gb|EIY44900.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|392654152|gb|EIY47801.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|392703265|gb|EIY96409.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL07T12C05]
gi|404578757|gb|EKA83476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis HMW 615]
Length = 296
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 28/226 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G + YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
K+LP +Q + + L GE + D+ R P +V D+
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDI 207
>gi|423306750|ref|ZP_17284749.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|423308662|ref|ZP_17286652.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T12C37]
gi|392678124|gb|EIY71533.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|392686767|gb|EIY80068.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T12C37]
Length = 299
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 144/313 (46%), Gaps = 31/313 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MARKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAMEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNITA--VEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCKDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------ 231
YG P +Q + + L E+V D+ R P +V DV + + L N
Sbjct: 169 YGASL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLINHPQNGIY 226
Query: 232 ------WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
L+ + +V G +R + V E++ P + I K+ + L
Sbjct: 227 HLCGSECLTIADIAYWVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKVRRELGYR 286
Query: 284 PVTYKDGVKLTLA 296
P T ++G+KL
Sbjct: 287 PHTLEEGIKLMFG 299
>gi|326799699|ref|YP_004317518.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
gi|326550463|gb|ADZ78848.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
Length = 306
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 44/314 (14%)
Query: 4 KRVLVVGGTGYLGQH----LLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
KR+LV G G LGQ LLQG + G Y +A++ S + + D+
Sbjct: 2 KRLLVTGSNGLLGQKITDILLQG--QFPGFEY-IASSRGSDRF------GTSSRYRYLDL 52
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ A A++ +PD+++N AA+ CE +P+ + +NV + V L + E K
Sbjct: 53 DITHHEQV-AKAIETYRPDIIINTAAMPNVDACEREPEKSYEVNVVA--VAHLIAVCERK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V++G + Y+EED PVN YGK K+AAE+ I + +AI+R+ ++YG
Sbjct: 110 NIHLIHLSTDFVFDGEEGPYEEEDIPNPVNTYGKHKLAAEELIQKATCPWAIVRTILVYG 169
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S + W L G+ + +D+ R P D+ K L + R +
Sbjct: 170 --VLRDMSRSNIVLWAKGALENGQSIRVVNDQWRMPTLAEDLAKACLTIAER------KA 221
Query: 240 QLLLNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQT 279
+ ++ G D S ++ E + + + P + K +
Sbjct: 222 TGMYHISGKDMFSICEIVEAVAAYYRLDASFICKEKSEVLKQDARRPKRTGFILDKAYER 281
Query: 280 LNIDPVTYKDGVKL 293
L+ P ++ +G+KL
Sbjct: 282 LDYVPHSFGEGLKL 295
>gi|319902306|ref|YP_004162034.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108]
gi|319417337|gb|ADV44448.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108]
Length = 311
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 31/310 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK+VL++G G+ G+ +L LS Y+V L D P+S + F +D
Sbjct: 14 KKKVLIIGANGFTGRRILNDLSH--NAAYEVTGC-------SLHDDICPNSGDYHFVRID 64
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + + QP V+N +ALSVP CE + A +IN+ + V L+
Sbjct: 65 IRDCKALNKLFEEV-QPYAVINTSALSVPDYCEIHHEEAEAINITA--VMHLAQHCRTHN 121
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LIHLSTD V++G K Y EED APVN YGK+K+ E+ I C+++AI R ++YG
Sbjct: 122 SRLIHLSTDFVFDGNTKRLYTEEDTPAPVNYYGKTKLEGERQIATICNDYAIARVVVVYG 181
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-------- 231
P Q + + L E++ D+ R P +V DV + + L N
Sbjct: 182 --NALPGQHGNIFQLVANRLRNNEEIFVVSDQWRTPTFVGDVSQGVEKLINHPHNGIYHI 239
Query: 232 ----WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
L+ + ++ G DR + + E+ P + I K + L P
Sbjct: 240 CGGDCLTIAGIAYRVADILGLDRSLICPISTEEMKEKTPRPCFSGLSIEKARKELKYQPH 299
Query: 286 TYKDGVKLTL 295
T +G++L
Sbjct: 300 TLDEGIRLMF 309
>gi|423218418|ref|ZP_17204914.1| dTDP-4-dehydrorhamnose reductase [Bacteroides caccae CL03T12C61]
gi|392627921|gb|EIY21956.1| dTDP-4-dehydrorhamnose reductase [Bacteroides caccae CL03T12C61]
Length = 305
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 28/230 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G G+ G+ LL+ LS K Y+V HS P L + F +VD++
Sbjct: 2 RNILIIGANGFTGRQLLKDLSA--HKQYNVTGCSLHSDIFPAL---ENTKKYRFIEVDIR 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + K PDVV+NC+ALSVP CE + A INV + V L+ + ++
Sbjct: 57 NEASVKEL-FKAICPDVVINCSALSVPDYCETHHEEAYLINVTA--VEQLAHLCKEYQSR 113
Query: 123 LIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
IHLSTD V++G Y EE APVN YG +K E+ + + CSN+AI R I+
Sbjct: 114 FIHLSTDFVFDGKINERTGQLYTEEILPAPVNYYGFTKWKGEEKVADICSNYAIARVEIV 173
Query: 178 YGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
YG K+LP +Q + + L G+++ D+ R P +V D+
Sbjct: 174 YG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTFVGDL 215
>gi|153806520|ref|ZP_01959188.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185]
gi|149131197|gb|EDM22403.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides caccae ATCC
43185]
Length = 305
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 118/230 (51%), Gaps = 28/230 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G G+ G+ LL+ LS K Y+V HS P L + F +VD++
Sbjct: 2 RNILIIGANGFTGRQLLKDLSA--HKQYNVTGCSLHSDIFPAL---ENTKKYRFIEVDIR 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + K PDVV+NC+ALSVP CE + A INV + V L+ + ++
Sbjct: 57 NEASVKEL-FKAICPDVVINCSALSVPDYCETHHEEAYLINVTA--VEQLAHLCKEYQSR 113
Query: 123 LIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
IHLSTD V++G Y EE APVN YG +K E+ + + CSN+AI R I+
Sbjct: 114 FIHLSTDFVFDGKINERTGQLYTEEILPAPVNYYGFTKWKGEEKVADICSNYAIARVEIV 173
Query: 178 YGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
YG K+LP +Q + + L G+++ D+ R P +V D+
Sbjct: 174 YG--------KALPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTFVGDL 215
>gi|336409846|ref|ZP_08590328.1| hypothetical protein HMPREF1018_02344 [Bacteroides sp. 2_1_56FAA]
gi|335946227|gb|EGN08033.1| hypothetical protein HMPREF1018_02344 [Bacteroides sp. 2_1_56FAA]
Length = 296
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 28/226 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGANGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
K+LP +Q + + L GE + D+ R P +V D+
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDI 207
>gi|256421363|ref|YP_003122016.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588]
gi|256036271|gb|ACU59815.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588]
Length = 297
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 40/310 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKS 63
+VL+ G G LGQHL+ +E Y V A+ LPQ +++ +L+
Sbjct: 2 KVLITGSNGLLGQHLIPVF--LEDSRYQVIASGRGPNRLPQ------QTGYIYEATNLRD 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + K+ QPD+V++ AA++ CE + D NV ++ +L E
Sbjct: 54 ATSVKHLLDKY-QPDIVIHAAAMTQVDDCERNKDLCWDTNVAAT--RYLLKAAEAHNTFF 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I LSTD V++G+K Y EED + P++ YG SKVAAE + +AI+R+ ++YG
Sbjct: 111 IFLSTDFVFDGLKGPYAEEDAVNPISYYGSSKVAAENMVRGSKLPWAIVRTVLVYGIAAD 170
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S +S I W+ + L +G+K++ D+ R P V+D LA+ + L DK+
Sbjct: 171 S--KRSNIITWVKNNLEQGKKLKVVDDQWRTPTLVQD-----LAVGCK-LVADKKAAGTF 222
Query: 244 NVGGPDRVSRVQMA---------------EVD-----RGVQSPADISMDITKLVQTLNID 283
++ G + ++ QMA +VD + + PA I K V+ L
Sbjct: 223 HISGSETLTPYQMAVQTADYFKLNTQLLEKVDAKSFTQPAKRPAKTGFVIDKAVKELGFA 282
Query: 284 PVTYKDGVKL 293
P ++ +G+++
Sbjct: 283 PHSFDEGLEI 292
>gi|262406505|ref|ZP_06083054.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22]
gi|262355208|gb|EEZ04299.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22]
Length = 306
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 31/231 (13%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVDLKS 63
+++G G+ G+ +L LS T + L D LP+ + F + D+++
Sbjct: 1 MIIGANGFTGRQILNDLS---------VHTQYKVTGCSLHPDILPNDAGKYRFIETDIRN 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E ++
Sbjct: 52 EADIKRLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNVTA--VSQLAVFCEEYKSRF 108
Query: 124 IHLSTDQVYEGVKSF-------------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
IHLSTD V++G K F Y EED APVN YG +K E+ + E CS+FA
Sbjct: 109 IHLSTDFVFDG-KMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSSFA 167
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+R +I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 168 IIRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 216
>gi|393783919|ref|ZP_10372088.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salyersiae
CL02T12C01]
gi|392667578|gb|EIY61085.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salyersiae
CL02T12C01]
Length = 295
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 144/309 (46%), Gaps = 42/309 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLKSG 64
+L++G G+ G+ +L L + Y++ A+ L D P + F D++
Sbjct: 3 ILIIGANGFTGRRMLDDL--VSCGKYNMTAS-------SLRDDIAPGDGYRFIRADIRRA 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ A+ K PDVV+N +ALSVP CE A + NV + V L+ E + I
Sbjct: 54 AEVQAL-FKEVCPDVVINTSALSVPDFCETHHSEARATNVIA--VEHLAHACEQYGSRFI 110
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G + Y EED PVN YG +K+ E+ + E CSN+AI+R ++YG
Sbjct: 111 HLSTDFVFDGRSECLYTEEDAPNPVNYYGVTKLEGEQRVSEYCSNYAIVRVVVVYG---- 166
Query: 184 SPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------ 231
K+LP +Q + L GE V D+ R P +V D+ + + L +
Sbjct: 167 ----KALPGQHGNILQLVADKLRNGETVRVVSDQWRTPTFVGDISEGVERLMHHPRNGIY 222
Query: 232 ------WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
+S + + +V G DR + V E+ P +DI K + +N
Sbjct: 223 HICGSDCVSIAEIAYRVADVLGLDRSLIQPVTTEEMQEATPRPRFSGLDIAKAKREINYL 282
Query: 284 PVTYKDGVK 292
P T ++G+K
Sbjct: 283 PHTLEEGIK 291
>gi|298481164|ref|ZP_06999358.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22]
gi|298272738|gb|EFI14305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22]
Length = 310
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 29/233 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS V A + T L D P+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS--------VHAQYKVTGC-SLHPDISPNDVGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKCL-FEEVQPDVVINCSALSVPDYCETHHEEAYLTNV--TAVSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEG------------VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS+
Sbjct: 110 SRFIHLSTDFVFDGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSS 169
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+AI+R +I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 170 YAIVRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 220
>gi|295084034|emb|CBK65557.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A]
Length = 310
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 29/233 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH---SFVFFDVD 60
K++L++G G+ G+ +L LS V A + T L D P+ + F + D
Sbjct: 2 KKILIIGANGFTGRQILNDLS--------VHAQYKVTGC-SLHPDISPNDVGKYRFIETD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+++ + + + QPDVV+NC+ALSVP CE + A NV + V+ L+ F E +
Sbjct: 53 IRNEADIKCLFEEV-QPDVVINCSALSVPDYCETHHEEAYLTNV--TAVSQLAVFCEEYK 109
Query: 121 NLLIHLSTDQVYEG------------VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
+ IHLSTD V++G Y EED APVN YG +K E+ + E CS+
Sbjct: 110 SRFIHLSTDFVFDGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSS 169
Query: 169 FAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+AI+R +I+YG P +Q + + L G+++ D+ R P YV DV
Sbjct: 170 YAIVRVAIVYGRAL--PGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDV 220
>gi|284162303|ref|YP_003400926.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631]
gi|284012300|gb|ADB58253.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631]
Length = 291
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 59/315 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS------TPLPQLLLDALPHSFVFFD 58
+V + GG+G LG + + E + Y+V + ++S P+ L D P+S V
Sbjct: 2 KVFITGGSGLLGSKVAEIALE---RGYNVYSGYNSHKPEFGEPVKFDLAD--PNSIVKVI 56
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D++ PDV+++ AAL+ CE + + A INV + + ++
Sbjct: 57 DDVR--------------PDVIIHSAALTDVDRCETEKELAYKINVEGTKI--VAEMARK 100
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+++STD V++G + YKEEDE P+N YG +K+ EK+ C +F I R+ +IY
Sbjct: 101 LGAFLVYISTDYVFDGERGMYKEEDETNPINYYGYTKLLGEKY----CQDFCIARTCVIY 156
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + S K+ W+ + L KGE V+ D+ P ++ K++L + R L E
Sbjct: 157 GARPAS--GKANFALWLINKLEKGECVKIITDQFITPTLNTNLAKMLLEIAERGLKE--- 211
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+ ++ G RVSR + A E++ + P D S+D++K +
Sbjct: 212 ---VFHLAGITRVSRFEFAKEIAREFGLDESLIVPSKMDEMNWIAKRPRDSSLDVSKAAR 268
Query: 279 TLNIDPVTYKDGVKL 293
LN P K +K+
Sbjct: 269 YLNEKPYDLKKALKV 283
>gi|298385499|ref|ZP_06995057.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14]
gi|298261640|gb|EFI04506.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14]
Length = 302
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K ++++G G+ G+ +L LS Y V L D LP + + F D
Sbjct: 2 KNIMIIGANGFTGRQILNDLSS--KAQYKVTGC-------SLHPDILPRNGGNYHFITTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E+ +
Sbjct: 53 IRDEAAVKQL-FKEVQPDVVINCSALSVPDYCETHHEEAWLTNVTA--VEQLAHLCESYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y EE APVN YG +K E+ + E CSN+AI R
Sbjct: 110 SRFIHLSTDFVFDGKIDEKSGQLYTEESLPAPVNYYGFTKWKGEEKVAEICSNYAIARVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDV 213
>gi|265763752|ref|ZP_06092320.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16]
gi|263256360|gb|EEZ27706.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16]
Length = 296
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 28/226 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
K +L++G G+ G+ +L LS V +H T L D P + F D++
Sbjct: 2 KNILIIGVNGFTGRRILNDLS--------VNPIYHVTGC-SLRDDICPGKDYRFVRTDIR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K +PD+V+N +ALSVP CE A + NV + V ++ E +
Sbjct: 53 DENEVRKL-FKECRPDIVINTSALSVPDYCETHHAEAEATNVTA--VETIAHVCEQYGSR 109
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IHLSTD V++G YKEEDE PVN YG +K+ AEK I CSN+AI+R ++YG
Sbjct: 110 FIHLSTDFVFDGKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYG-- 167
Query: 182 TISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
K+LP +Q + + L GE + D+ R P +V D+
Sbjct: 168 ------KALPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDI 207
>gi|427736886|ref|YP_007056430.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
gi|427371927|gb|AFY55883.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
Length = 311
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 132/258 (51%), Gaps = 28/258 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG HL E+ + +DV T+ S L D V D+
Sbjct: 22 KKLLITGSSGFLGWHL----CELAKQKWDVYGTYFSHNL-----DIEGTKLVKLDL---- 68
Query: 64 GSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F QP V++ AA S P C+ P+ ++SINV +SL ++ +
Sbjct: 69 -TDFSELKKLFQEIQPSAVIHTAAQSQPNFCQTHPEESLSINVTASLN--IAGLCADNSI 125
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STD V++G+K FYKE D + PVN+YG+ KV AE + ++ AI R +++G
Sbjct: 126 PCVFTSTDLVFDGLKGFYKETDSVNPVNIYGEHKVIAENGMLKRYPQTAICRMPLMFGGA 185
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T P S +Q L +G++++ F DE R PV + + +L L+ DK +
Sbjct: 186 T--PTATSF-LQSFLKTLQEGKELKLFVDEFRTPVSGKTAAEGLL------LALDKGIG- 235
Query: 242 LLNVGGPDRVSRVQMAEV 259
++++GG +R+SR +
Sbjct: 236 IIHLGGKERISRYDFGRL 253
>gi|327400446|ref|YP_004341285.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6]
gi|327315954|gb|AEA46570.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6]
Length = 289
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 146/309 (47%), Gaps = 47/309 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G LG + + E + Y +H + + +D L + F+
Sbjct: 2 RIFITGGSGLLGHRIAEIALEKGYEVYSGYCHNHPSAGKPVKID-LSNPVSIFET----- 55
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PDV+++ AAL+ CE + + A INV + ++ + LI
Sbjct: 56 -------IKDAKPDVIMHTAALTNVDKCEKEKELAFRINVEGT--KAIAEAVRKLNSFLI 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y+EEDE PVN YG +K+ E++ C +F I R+ +IYG + S
Sbjct: 107 YVSTDYVFDGRKGMYREEDETNPVNYYGHTKLLGEQY----CKDFCIARTCVIYGAKPAS 162
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K + W+ L GEKV D+ P ++ K++L + +K ++ + +
Sbjct: 163 --GKVNFVLWLIDKLRNGEKVRIVTDQYITPTLNTNLAKMMLEIA------EKGLKGVFH 214
Query: 245 VGGPDRVSRVQMAE-------VDRGVQSPA-------------DISMDITKLVQTLNIDP 284
+ G RVSR + AE +D+ + +P+ D S+D +K V+ L+ P
Sbjct: 215 LAGATRVSRFEFAETLADVFGLDKTLITPSKMEEINWVAVRPKDSSLDTSKAVKLLDEKP 274
Query: 285 VTYKDGVKL 293
+ +K+
Sbjct: 275 YALEKALKV 283
>gi|333031141|ref|ZP_08459202.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
gi|332741738|gb|EGJ72220.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011]
Length = 299
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 24/234 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP-HSFVFFDVDLK 62
KR+L+ G G+ G++LLQ ++ K Y++ AT +ST D P + + +DL
Sbjct: 5 KRILITGANGFTGRYLLQYF--MQQKTYELFATSNST-------DKYPTQGYEYQRLDLT 55
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A K QPDV+++ AA+S CE +P A S+NV + V + + +
Sbjct: 56 ESGNVIAYIQKI-QPDVIIHTAAISGIPQCEENPSQAYSVNVEA--VKTIGTVAKKLAIH 112
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I LSTD V++G + Y EED AP+N YGK+K+ AE++I + +++AI R +++YG
Sbjct: 113 FIQLSTDFVFDGKREIPYTEEDIPAPINEYGKTKLEAEQWIQKHLTHYAIARVAVVYGK- 171
Query: 182 TISPVPK----SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
PK + ++ I S LS E++ D+ R P YV D+ + I L +
Sbjct: 172 -----PKDGQHTNIVEIIQSKLSNNEELHLVSDQWRTPTYVGDICQGIHLLIEK 220
>gi|365875832|ref|ZP_09415357.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis Ag1]
gi|442587572|ref|ZP_21006388.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis R26]
gi|365756344|gb|EHM98258.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis Ag1]
gi|442562743|gb|ELR79962.1| dTDP-4-dehydrorhamnose reductase [Elizabethkingia anophelis R26]
Length = 307
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 137/256 (53%), Gaps = 18/256 (7%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+++ +L+ G G+LG+ L++ E G PY V AT L + LP + +F +++
Sbjct: 7 NRQIILITGSNGFLGRRLIK---EFSGLPYRVIAT----SLSDNKISDLPKNTIFRKLNI 59
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + ++ +P V+N A++ CE D D A +INV + L ++ + E+
Sbjct: 60 ADKEEVNHIFDEY-KPSFVINAGAVTNVEACEKDKDFAYAINVDAVLN--IAEQAKKYES 116
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L++ LSTD V++G YKE D+ PVN YG++K +E+ + E ++AILR+ ++YG
Sbjct: 117 LVVQLSTDFVFDGQNGPYKESDKRCPVNEYGRTKALSEEKLEESGCDYAILRTILVYG-N 175
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ P + + W+ +LS+G +++ ++ R P ++ D LA R + E K+ +
Sbjct: 176 SDDPDRGNF-VLWVKKMLSEGNEIKVVNNHWRMPTFIND-----LAEACRLVVE-KKAKG 228
Query: 242 LLNVGGPDRVSRVQMA 257
+ N+ G + S + A
Sbjct: 229 IFNISGEEEYSIEEFA 244
>gi|317479141|ref|ZP_07938281.1| RmlD substrate binding domain-containing protein [Bacteroides sp.
4_1_36]
gi|316904713|gb|EFV26527.1| RmlD substrate binding domain-containing protein [Bacteroides sp.
4_1_36]
Length = 300
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 31/313 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSH---------NVFYQTTGCSLHDDICPHSGDYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVKKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNITA--VEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------ 231
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLISHPQNGIY 226
Query: 232 ------WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
L+ + +V G +R + V E++ P + I K + L
Sbjct: 227 HLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAHRELGYQ 286
Query: 284 PVTYKDGVKLTLA 296
P T ++G+KL
Sbjct: 287 PYTLEEGIKLMFG 299
>gi|301115600|ref|XP_002905529.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110318|gb|EEY68370.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 338
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 62/327 (18%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS--------------EIEGKPYDVAATHHS---TPLPQL 45
K RVLV+GGT Y+ Q +LQ L E+E VA T S PLP
Sbjct: 2 KTRVLVLGGTSYVAQFVLQRLQQYATLRVVDEDTVKEVEA----VACTTRSQPFAPLPAG 57
Query: 46 LLDALPHSF--------VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPD 97
+ A SF V++ VDL + F +P VV+NC A+S P VC+ +P+
Sbjct: 58 FITANSDSFSESKQTVTVYWQVDLMDLEALNKCIDDF-RPTVVINCTAISSPAVCQKEPE 116
Query: 98 SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK---SFYKEEDEIAP--VNVYG 152
A + P LV L +HLSTD VYEG K + YKE+D ++ ++VYG
Sbjct: 117 RA---SAPRGLVALLDELPWPIR--FVHLSTDFVYEGTKPQGTSYKEDDAVSSPDLSVYG 171
Query: 153 KSKVAAEKFIYEK--CSNFA--ILRSSIIYGPQTISPVPKSLP--IQWIDSVLSKGEK-- 204
K+ + F+ + +N ILR + + GP +S P ++W+ L + E
Sbjct: 172 VGKLRFDHFLQNRPNSTNLQALILRIANVVGPTAPLFPDRSAPKFMEWLHHQLFQLETAT 231
Query: 205 -VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM------- 256
++ + DE R +YV D+V +++ L L K+ L+NVGG D +SRV++
Sbjct: 232 PLKLWSDEFRSYLYVFDLVDLLIELLTINL---KEHTTLVNVGGIDALSRVELANKHIAP 288
Query: 257 ---AEVDRGVQSPADISMDITKLVQTL 280
A+VD G SP + ++ +L L
Sbjct: 289 TSRAQVDLGYPSPLNTKLNTLRLANLL 315
>gi|160890313|ref|ZP_02071316.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492]
gi|156860045|gb|EDO53476.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis
ATCC 8492]
Length = 300
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------ 231
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PRQHGNVLQLVANRLRSNEEVFVVSDQWRTPTFVGDVSQGVEKLISHPQNGIY 226
Query: 232 ------WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
L+ + +V G +R + V E++ P + I K + L
Sbjct: 227 HLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKASRELGYQ 286
Query: 284 PVTYKDGVK 292
P T ++G+K
Sbjct: 287 PRTLEEGIK 295
>gi|83643162|ref|YP_431597.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis
KCTC 2396]
gi|83631205|gb|ABC27172.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis
KCTC 2396]
Length = 300
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 27/253 (10%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV--D 60
K RVLV G +G+LG H+ + L++ Y+V A H LP+ D P F V D
Sbjct: 10 KPRVLVTGASGFLGAHICRALNQ----DYEVLAQSHQVTLPE---DLAP-----FRVRQD 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L A+ + PD V++ AALS P C+ P+ ++ +NV ++ L++ ++
Sbjct: 58 LCDAELTQAM-FRNLTPDAVIHAAALSDPNTCQQQPERSLQVNVEAT--RLLAALCAERD 114
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y+E D + P+N YG+ K AEK I E+ I+R ++G
Sbjct: 115 IPLLFTSTDLVFDGRQGVYRESDPVNPINRYGEHKAMAEKLIREQHPRATIVRMPWMFGL 174
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ P S QW++ L +GE + F DE R V + I+ Q
Sbjct: 175 GLLKP---SGVTQWLER-LRQGETLTGFVDEYRSAVDYATAAQGIVRFFQ------MQQG 224
Query: 241 LLLNVGGPDRVSR 253
L L++GG + VSR
Sbjct: 225 LTLHLGGIETVSR 237
>gi|393788011|ref|ZP_10376142.1| dTDP-4-dehydrorhamnose reductase [Bacteroides nordii CL02T12C05]
gi|392656224|gb|EIY49863.1| dTDP-4-dehydrorhamnose reductase [Bacteroides nordii CL02T12C05]
Length = 295
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 52/314 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L++G G+ G+ +L L + + Y++ A + + F D+++ S
Sbjct: 3 ILIIGANGFTGRWILNDL--VAREIYNITACSLRNDIQS------SDGYQFIRADIRNAS 54
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A+ K PDVV+N +ALSVP CE + A + N+ + V L+ E + IH
Sbjct: 55 EVRAL-FKEVCPDVVINTSALSVPDFCETHHNEARATNITA--VEHLARACEQYGSRFIH 111
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G Y EEDE PVN YG +K+ E+ + E C N+AI+R ++YG
Sbjct: 112 LSTDFVFDGRTDRLYTEEDEPNPVNYYGITKLEGEERVAECCGNYAIVRVVVVYG----- 166
Query: 185 PVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
K+LP +Q + + L GE + D+ R P +V D+ + L +
Sbjct: 167 ---KALPGQHGNIVQLVANKLRSGETIRVVSDQWRTPTFVGDISYAVEQLMH------HP 217
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+ ++ G D VS +A E+ P + I K +
Sbjct: 218 RNGIYHICGSDCVSIADIAYRVAEVLKLDRSLILPVTTEEMQEATPRPRFSGLSIAKAKR 277
Query: 279 TLNIDPVTYKDGVK 292
+N P T ++G+K
Sbjct: 278 EINYTPHTLEEGIK 291
>gi|270296883|ref|ZP_06203082.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20]
gi|270272870|gb|EFA18733.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20]
Length = 300
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFD 58
M++K++LV+G G+ G+ +L LS + T L D PHS + F
Sbjct: 1 MTRKKILVIGANGFTGRRILDDLSR---------NLSYQTTGCSLHDDICPHSGNYRFIR 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + + + QPDVV+N +ALSVP CE A ++N+ + V L+ E
Sbjct: 52 TDICNRQAVEKLFQEV-QPDVVINTSALSVPDYCETHHAEADAVNI--TAVEHLAECCEA 108
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ IHLSTD V+ G Y EED APVN YG +K+ EK I C ++AI+R ++
Sbjct: 109 GGSRFIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVV 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------ 231
YG P +Q + + L E+V D+ R P +V DV + + L +
Sbjct: 169 YGAAL--PGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLISHPQNGIY 226
Query: 232 ------WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
L+ + +V G +R + V E++ P + I K + L
Sbjct: 227 HLCGSECLTIADIAYRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAHRELGYQ 286
Query: 284 PVTYKDGVK 292
P T ++G+K
Sbjct: 287 PRTLEEGIK 295
>gi|29346135|ref|NP_809638.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|383122397|ref|ZP_09943090.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
gi|29338029|gb|AAO75832.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842514|gb|EES70594.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6]
Length = 302
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS---FVFFDVD 60
K ++++G G+ G+ +L LS Y V L D LP + + F D
Sbjct: 2 KNIIIIGANGFTGRQILNDLSS--KAQYKVTGC-------SLHPDILPKNGGNYHFITTD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K QPDVV+NC+ALSVP CE + A NV + V L+ E+ +
Sbjct: 53 IRDEAVVKQL-FKDVQPDVVINCSALSVPDYCETHHEEAWLTNVTA--VEQLAHLCESYK 109
Query: 121 NLLIHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ IHLSTD V++G Y E+ APVN YG +K E+ + E CSN+AI R
Sbjct: 110 SRFIHLSTDFVFDGKIDEKSGQLYTEKSLPAPVNYYGFTKWKGEEKVTEICSNYAIARVE 169
Query: 176 IIYGPQTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
I+YG K+LP +Q + + L+ G+++ D+ R P YV DV
Sbjct: 170 IVYG--------KALPGQHGNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDV 213
>gi|427382618|ref|ZP_18879338.1| dTDP-4-dehydrorhamnose reductase [Bacteroides oleiciplenus YIT
12058]
gi|425729863|gb|EKU92714.1| dTDP-4-dehydrorhamnose reductase [Bacteroides oleiciplenus YIT
12058]
Length = 299
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 113/229 (49%), Gaps = 17/229 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK++LV+G G+ G+ +L LS Y V L D P S + F D
Sbjct: 2 KKKILVIGANGFTGRRVLNDLSC--NDEYIVTGC-------SLHDDIAPGSGNYHFISAD 52
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G A + +P+VV+N +ALSVP CE + A SIN+ + V + E
Sbjct: 53 V-CQMGEQAALFREVRPNVVINASALSVPDYCETHHEEAESINITA--VGQFAFRCEVSG 109
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
IHLSTD V+ G YKE D APVN YG +K+ E+ + E CSN+AI+R +++YG
Sbjct: 110 ARFIHLSTDFVFSGDSGQLYKEVDTPAPVNYYGVTKLKGEQRVAELCSNYAIMRIAVVYG 169
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
P +Q + L E+++ D+ R P YV DV + I L
Sbjct: 170 ATL--PGQHGNVLQLVADRLRNNEEIKVVSDQWRTPTYVGDVSQGIEKL 216
>gi|86134015|ref|ZP_01052597.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152]
gi|85820878|gb|EAQ42025.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152]
Length = 299
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 31/261 (11%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+ F + +D+ + S LK +PD ++N AA++ CEND +NV +V W
Sbjct: 43 NDFQYISIDITNKSQLTEELLKI-KPDYIINTAAMTQVDACENDKAKCDILNVE--VVGW 99
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI 171
L+ + LIH+STD +++G K +YKE DE P++ YG SK+ +E+ + + N+ I
Sbjct: 100 LAVICQELSAHLIHISTDFIFDGKKGWYKEIDEPNPLSYYGLSKLKSEQVLEKSNINYTI 159
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
LR+ ++YG + + +S + W+ L ++ D+ R P YV D LAL +
Sbjct: 160 LRTILVYGK--VFDMSRSNIVLWVKESLENKREITIVDDQYRTPTYVED-----LALACK 212
Query: 232 WLSEDKQMQLLLNVGGPDRVS--------------------RVQMAEVDRGVQSPADISM 271
+S DK + N+ + +S + A +++ P
Sbjct: 213 -ISMDKNATGIFNISSSELLSIFDIAKQIAAVFNLDDSYIKSISTATLNQTANRPIKTGF 271
Query: 272 DITKLVQTLNIDPVTYKDGVK 292
D++K + LN P T+KD ++
Sbjct: 272 DLSKTNKELNFYPKTFKDDLQ 292
>gi|428208392|ref|YP_007092745.1| dTDP-4-dehydrorhamnose reductase [Chroococcidiopsis thermalis PCC
7203]
gi|428010313|gb|AFY88876.1| dTDP-4-dehydrorhamnose reductase [Chroococcidiopsis thermalis PCC
7203]
Length = 290
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 52/314 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++LV G +G+LG HL Q + + +DV +T+ H +P + + +DL
Sbjct: 2 KKLLVTGASGFLGWHLCQ----LAKQQWDVYSTYFSHEIEIPGVTM---------LKIDL 48
Query: 62 KSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F A+ F Q P ++ AA S P C+ + + +INV +SL ++ +
Sbjct: 49 RD---FQALKHLFQQIQPSATIHTAAQSSPNYCQTHAEESYAINVTTSLN--IAGLCADF 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I STD V++G+ + Y+E D ++PVN YG+ KV AE+ I + I R +++G
Sbjct: 104 GIPFIFTSTDLVFDGLNAPYRETDPVSPVNAYGEQKVQAEEGILARYPLATICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
T P S IQ L G+++ F DE R P K +L + +KQ+
Sbjct: 164 MAT--PTATSF-IQPFMQTLKDGKELALFTDEFRTPASGTTAAKGLLMVL------EKQV 214
Query: 240 QLLLNVGGPDRVSR--------------------VQMAEVDRGVQSPADISMDITKLVQT 279
Q ++++GG +R+SR + +V PAD+S+D +K
Sbjct: 215 QGMIHLGGKERLSRYDFGRLLVEVFQLPATRLKSCRQQDVKMAAPRPADVSLDSSKAFH- 273
Query: 280 LNIDPVTYKDGVKL 293
L P++ ++ +++
Sbjct: 274 LGYQPLSVREELEM 287
>gi|359463701|ref|ZP_09252264.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris sp. CCMEE 5410]
Length = 300
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 50/310 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q +++ + + A +H + +P VDL+
Sbjct: 12 KLLITGASGFLGWYLCQ-VAQSRWQVFGTAYSH-AVEIP---------GCSMVTVDLRDF 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW-LSSFTENKENLL 123
+ V L+ QPD V++ AA + P VC+ +P S +INV +S W L+ + L
Sbjct: 61 ASLKQV-LQTVQPDAVIHAAAQARPHVCQAEPQSTHAINVEAS---WTLADLCGESQIPL 116
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +STD V++G Y+E D ++P+N YG+ KV AE+ + E+ + I R +++G +
Sbjct: 117 LFVSTDLVFDGQDPPYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFG---V 173
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
+P S IQ + L G ++ F DE R PV D + I+LAL +
Sbjct: 174 TPHAASF-IQPMIQNLEAGIALQLFEDEFRTPVSGLDAARSILLALAKG--------EGY 224
Query: 243 LNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNI 282
+++GG +R+SR +M + V PAD+S+D + L +L
Sbjct: 225 IHLGGKERLSRYEMGQQLVDCLGYPPSLLSGCSQIDVSLSTPRPADVSLD-SSLAYSLGY 283
Query: 283 DPVTYKDGVK 292
+P + ++
Sbjct: 284 EPKVFGQALR 293
>gi|408673089|ref|YP_006872837.1| dTDP-4-dehydrorhamnose reductase [Emticicia oligotrophica DSM
17448]
gi|387854713|gb|AFK02810.1| dTDP-4-dehydrorhamnose reductase [Emticicia oligotrophica DSM
17448]
Length = 300
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 149/311 (47%), Gaps = 40/311 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K++L+ G G LGQ L++ L + + + AT LP + + +D+
Sbjct: 2 KKILITGSNGLLGQKLVELL--LNNQDVQIIATARGENRLP------FHEGYEYHPMDIT 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ +V QP+V+++ AA++ CE++ + + NV S V +L ++
Sbjct: 54 NREQVLSVVESI-QPEVIIHTAAMTNVDQCESEKAACWAQNVSS--VEYLVEACAKTDSF 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+H+STD +++G YKEEDE P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 111 LLHISTDFIFDGTSGPYKEEDEANPISFYGWSKYAAEKLVIHSKIRWAIARTVLVYG--I 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ ++ I W+ L +G+ ++ D+ R P D+ K + K+ + +
Sbjct: 169 AHDMSRTNIILWVKKSLEEGKNIKVVTDQWRTPTLAEDLAKGCALIAT------KEAEGI 222
Query: 243 LNVGGPDRVSRVQMA-------EVDRGVQSPAD-------------ISMDITKLVQTLNI 282
N+ G D ++ +MA ++++ + + AD D+TK + L
Sbjct: 223 FNISGKDFLTPYEMAIMTADYFKLNKSLIAQADSTTFSQPAKRPPRTGFDLTKSREVLGY 282
Query: 283 DPVTYKDGVKL 293
+PV++ +G+++
Sbjct: 283 EPVSFMEGIEV 293
>gi|300772034|ref|ZP_07081904.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300760337|gb|EFK57163.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 308
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK VL+ G G+LGQ L LS Y V AT D + F +D
Sbjct: 1 MSKTTVLITGANGFLGQKLTDLLSA--DSRYKVIATSKGENRNPNKAD-----YTFRQLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ D + L+ +P +++ AAL+ CE P+ +N+ +V L +
Sbjct: 54 ILDTEALDNI-LQHYKPASIIHTAALTSVEACEEQPELCQRLNI--DVVAQLGRYAALNN 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ ++HLSTD V++G YKE+D P++ YG+SKV +E + +A+LR+ ++YG
Sbjct: 111 SYIVHLSTDFVFDGKNGPYKEDDPTNPLSAYGRSKVNSESALALTQCKYAVLRTILVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW------LS 234
I+ +S + W LSK E ++ +D+ R P +V D+ + + + +S
Sbjct: 170 -IIADEKRSNLVLWAKDKLSKQEAIKVVNDQWRMPTFVDDLARACKSAIEKQPTGIFHIS 228
Query: 235 EDKQMQL------LLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
++ M + + + DR +S + A + + P D++K + L+ P
Sbjct: 229 GEEMMSIAEAVYTIADFWNFDRTYISEISAATIGQTDNRPRKTGFDLSKAKRLLDYRPTP 288
Query: 287 YKDGVKL 293
+++ + L
Sbjct: 289 FRESLHL 295
>gi|227536063|ref|ZP_03966112.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243960|gb|EEI93975.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 308
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 26/307 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK VL+ G G+LGQ L LS Y+V AT D + F +D
Sbjct: 1 MSKSTVLITGSNGFLGQKLTDLLSA--DSRYEVIATSKGENRNPNQAD-----YTFRQLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + L+ +P +++ AAL+ CE P+ +N+ +V L +
Sbjct: 54 ILDTESLNNI-LQHYKPASIIHTAALTSVEACEEQPELCQRLNI--DVVAQLGRYAALNN 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ L+HLSTD V++G YKE+D P++ YG+SKV +E + +A+LR+ ++YG
Sbjct: 111 SYLVHLSTDFVFDGKNGPYKEDDPTNPLSAYGRSKVDSENALALTQCKYAVLRTILVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW------LS 234
I+ +S + W LSK E ++ +D+ R P +V D+ + + + +S
Sbjct: 170 -IIADEKRSNLVLWAKDKLSKQEAIKVVNDQWRMPTFVDDLARACKSAIEKQQTGIFHIS 228
Query: 235 EDKQMQL------LLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
++ M + + + DR +S + A + + P D++K + L+ P
Sbjct: 229 GEEMMSIAEAVYTIADFWNFDRTYISEISAATIGQTENRPCKTGFDLSKAKRLLDYQPTP 288
Query: 287 YKDGVKL 293
++ + L
Sbjct: 289 FRKSLHL 295
>gi|348666186|gb|EGZ06014.1| hypothetical protein PHYSODRAFT_532795 [Phytophthora sojae]
Length = 351
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 140/294 (47%), Gaps = 56/294 (19%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIE----------GKPYDVAATHHSTPLPQLLLDALPHSF 54
R+LV+GGT Y+ Q LLQ + + + G+ VA T S P LP F
Sbjct: 3 RILVLGGTSYVAQFLLQRVLQDDALRVASGDQLGEISAVACTIRSEPF-----SPLPAGF 57
Query: 55 V-------------FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMS 101
V ++ VD+ + F P VV+NCAA+S P VC+ DP+ A +
Sbjct: 58 VTAGSEPAARAVRVYWQVDIVDEEALEKCVQDF-HPTVVINCAAISSPAVCQKDPNKACA 116
Query: 102 INVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPV-----NVYGKSKV 156
P +VN L +H STD VYEG +++ + +E A V +VYG SK+
Sbjct: 117 ---PRGVVNLLEKLPWRTR--FVHFSTDFVYEGTQAWGESYEEDAAVSSSKLSVYGASKL 171
Query: 157 AAEKFI----YEKCSNFAILRSSIIYGPQTISPV--PKSLP--IQWIDSVLSKGEK---- 204
++F+ + F +LR + + GP ++PV KS P +QW+ L + E
Sbjct: 172 RFDQFLLSGHWSANFEFLVLRIANVVGP--VAPVFPNKSAPKFMQWLHQQLFQPETADVP 229
Query: 205 VEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE 258
++ + DE R +Y+ D+V I+ L + L+N+GG + +SRV++A
Sbjct: 230 LKLWSDEFRSYLYIHDLVSILFKLLA---TNANASATLVNLGGLEALSRVELAR 280
>gi|189465900|ref|ZP_03014685.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM
17393]
gi|189434164|gb|EDV03149.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides intestinalis
DSM 17393]
Length = 301
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
KK++LV+G G+ G+ +L LS Y V L D P S + F D
Sbjct: 4 KKKILVIGANGFTGRRILNDLSR--NDEYIVTGC-------SLHDDIAPGSGNYRFISAD 54
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G + + +P+VV+N +ALSVP CE + A SINV + V L+ E
Sbjct: 55 I-CQMGEQSALFREVRPNVVINTSALSVPDYCEAHHEEADSINVNA--VGQLAFRCEASA 111
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIHLSTD V+ G Y E D PVN YG +K+ EK E CSN+AI R +++YG
Sbjct: 112 ARLIHLSTDFVFNGDTTQLYTEVDTPDPVNYYGVTKLKGEKRAAELCSNYAIARVAVVYG 171
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
P +Q + L E++ D+ R YV DV + I L N
Sbjct: 172 AAL--PGQHGNVLQLVADRLRNNEEIRVVSDQWRTATYVGDVSQGIEKLIN 220
>gi|428201502|ref|YP_007080091.1| dTDP-4-dehydrorhamnose reductase [Pleurocapsa sp. PCC 7327]
gi|427978934|gb|AFY76534.1| dTDP-4-dehydrorhamnose reductase [Pleurocapsa sp. PCC 7327]
Length = 292
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 31/260 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
+++LV G +G+LG +L Q + +DV T+ H+ +P + L V+L
Sbjct: 2 QKLLVTGASGFLGWNLCQQARQ----KWDVWGTYFTHAVEIPGVTL---------LKVEL 48
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F A+ F QP V++ AA S P C+ PD +INV SSL ++ ++
Sbjct: 49 ---TDFHALKQLFTDIQPAAVIHTAAQSKPNFCQEHPDETYAINVTSSLN--IARLCSDR 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ STD V+ G+ Y+E D ++P++ YG+ KV AE+ + E AI R +++G
Sbjct: 104 AIPCVFTSTDLVFNGLNPPYQETDPVSPISYYGEQKVLAERGMLECYPRTAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
SPV S IQ +L G+++ F DE R PV +L L+ +KQ+
Sbjct: 164 --VASPVAGSF-IQPFIEILKAGKELSLFTDEFRTPVSGSTAASGLL------LALEKQI 214
Query: 240 QLLLNVGGPDRVSRVQMAEV 259
LL++GG + +SR Q +
Sbjct: 215 AGLLHLGGKESISRYQFGRL 234
>gi|158337932|ref|YP_001519108.1| RmlD substrate binding domain-containing protein [Acaryochloris
marina MBIC11017]
gi|158308173|gb|ABW29790.1| RmlD substrate binding domain [Acaryochloris marina MBIC11017]
Length = 299
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 50/314 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q + + V T +S + +P V VDL+
Sbjct: 12 KLLITGASGFLGWYLCQ----VAQSSWQVFGTAYSHAV------EIPGCSVV-TVDLRDF 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW-LSSFTENKENLL 123
+ V L+ QPD V++ AA + P VC+ +P S +INV +S W L+ + L
Sbjct: 61 ASLKQV-LQTVQPDAVIHAAAQARPHVCQAEPQSTHAINVEAS---WTLADLCGESQIPL 116
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +STD V++G Y+E D ++P+N YG+ KV AE+ + E+ + I R +++G +
Sbjct: 117 LFVSTDLVFDGQDPPYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFG---V 173
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
+P S IQ + L G ++ F DE R PV D + I+LAL +
Sbjct: 174 TPHAASF-IQPMIQNLEAGIALQLFEDEFRTPVSGLDAARGILLALAKG--------EGY 224
Query: 243 LNVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNI 282
+++GG +R+SR +M + V PAD+S+D + L +L
Sbjct: 225 IHLGGKERLSRFEMGQQLVDCLGYPPTLLTGCSQTDVSLSTPRPADVSLD-SSLAYSLGY 283
Query: 283 DPVTYKDGVKLTLA 296
P + ++ L
Sbjct: 284 APNLFGQALRQMLG 297
>gi|156328608|ref|XP_001618961.1| hypothetical protein NEMVEDRAFT_v1g224653 [Nematostella vectensis]
gi|156201079|gb|EDO26861.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 5/170 (2%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+ F ++D+D+ + F A LK +P ++N AA++ CEND + +NV ++V
Sbjct: 35 NDFEYYDIDITNKELFIASILKI-KPHYIINTAAMTNVDACENDKEGCYDLNV--NVVEN 91
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI 171
L + LIHLSTD +++GVK Y E+DE P++ YGK+K+ +EK + + NF I
Sbjct: 92 LIEVCQQINTHLIHLSTDFIFDGVKGNYTEDDEPNPLSYYGKTKLISEKLVQDSTINFTI 151
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
LR+ ++YG ++ + +S + W+ L +++ +D+ R P Y D+
Sbjct: 152 LRTILVYG--LVNDMSRSNIVLWVKESLENKKEITIVNDQYRTPTYAEDL 199
>gi|375144324|ref|YP_005006765.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
gi|361058370|gb|AEV97361.1| dTDP-4-dehydrorhamnose reductase [Niastella koreensis GR20-10]
Length = 294
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 41/311 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLKS 63
+VL+ G G LGQHL + L + K Y V AT + LP + +S+ D+
Sbjct: 2 KVLITGANGLLGQHLTKLLLD---KNYQVVATGRGESRLP--FEPSGNYSYHSMDI---- 52
Query: 64 GSGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ FD A + +PDVVV+ AA++ CE P+ INV + + + E +
Sbjct: 53 ANAFDTYAVMNRERPDVVVHAAAMTQVDECELQPEQCDRINVQGTA--QILTDAETFSSH 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
I++STD V++G K Y E+DE P+++YG +K+ AE + FAI+R+ ++YG
Sbjct: 111 FIYISTDFVFDGEKGNYSEDDEPLPISLYGFTKLQAESMVQTSELPFAIVRTCLVYG--N 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + W L +G+ ++ D+ R P YV D+ K I+ + +K+ +
Sbjct: 169 LLKGTRSNIVSWAKDSLEQGKTIQVVSDQVRTPTYVGDLAKGIVLII------EKKATGI 222
Query: 243 LNVGGPD--------------------RVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
N+ G D R+ +V + + + P I K + L
Sbjct: 223 YNISGKDWLTPYDIAIKTANKYQLDAGRIVKVDASTFKQPGRRPLKTGFVIEKARKELGY 282
Query: 283 DPVTYKDGVKL 293
+P+++ +G+ L
Sbjct: 283 EPMSFDEGLNL 293
>gi|312129515|ref|YP_003996855.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM
17132]
gi|311906061|gb|ADQ16502.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM
17132]
Length = 296
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L+Q L+ GK +A LP L + + +D+
Sbjct: 2 KILITGSNGLLGQKLVQQLA---GKGDIIATARGENRLP------LSDGYRYRSLDITDP 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+AV ++ PD +++ AA++ CE D + +NV ++ +L E + +
Sbjct: 53 EAVNAVIIE-ETPDAIIHTAAMTNVDQCETDKEECWKLNVHAT--EYLVKAAEKTGSYFL 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD +++G + Y E+ E P++ YG SK AAEK + N++I R+ ++YG
Sbjct: 110 HVSTDFIFDGKEGPYAEDAEPNPISFYGWSKFAAEKVVQSSSLNWSIARTVLVYG--IAH 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S I W+ L G+ ++ +D+ R P D+ + + +K+ Q + N
Sbjct: 168 DMSRSNIILWVKGSLEAGKTIKVVNDQWRTPTLAEDLAAGCILMV------EKKAQGIYN 221
Query: 245 VGGPDRVSRVQMA 257
+ G D ++ QMA
Sbjct: 222 ISGKDLLNPYQMA 234
>gi|75909858|ref|YP_324154.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75703583|gb|ABA23259.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413]
Length = 294
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 147/318 (46%), Gaps = 57/318 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLL----LDALPHSFVFFD 58
K++L+ G +G+LG HL Q + E + Y +H S P +LL D L +F +
Sbjct: 2 KKLLITGASGFLGWHLCQAAQQ-EWEVYGTYCSHELSVPGIKLLKVNLTDFLELKQIFNE 60
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ +PD V++ AA S P C+ PD + +INV +S L+
Sbjct: 61 I----------------KPDAVIHTAAQSQPNFCQIHPDESYTINVTASCN--LAELCAA 102
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
S++ V++G+KS YKE D + PVN+YG+ KV AE I E+ + R +++
Sbjct: 103 ASIPYAFTSSELVFDGIKSPYKETDTVCPVNIYGEQKVLAEVGILERYPIATVCRMPLMF 162
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDK 237
G T P KS IQ L G+++ F DE R PV K I+LAL +
Sbjct: 163 GNAT--PTAKSF-IQPFIQTLKSGQELTLFIDEFRTPVSGTTAAKGILLAL--------E 211
Query: 238 QMQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLV 277
+++ ++++GG +R+SR +V+ PAD+S+D ++
Sbjct: 212 KVKGIIHLGGKERISRYDFGHILAEVFQLPTAGIKACLQQDVNMAAPRPADVSLDSSQAF 271
Query: 278 QTLNIDPVTYKDGVKLTL 295
L P++ K ++ L
Sbjct: 272 -ALGYQPLSIKSELEALL 288
>gi|288932726|ref|YP_003436786.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642]
gi|288894974|gb|ADC66511.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642]
Length = 290
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 57/313 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G LG L + E K Y+V + ++S P+ P F DL +
Sbjct: 2 RIFITGGSGLLGSKLAEIALE---KGYEVYSGYNSHK-PEF---GKPVKF-----DLANS 49
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
D+V A+ +PDV+V+ AAL+ CE + D A INV + + ++
Sbjct: 50 ---DSVVRAISEVKPDVIVHSAALTDVDRCEVEKDLAYKINVEGTKI--VAEMARKVGAY 104
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
++++STD V++G + YKEEDE P+N YG +K+ EK+ C +F I R+ +IYG +
Sbjct: 105 MVYISTDYVFDGERGMYKEEDETHPINYYGYTKLLGEKY----CRDFCIARTCVIYGAK- 159
Query: 183 ISPVPKSLPIQ---WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
P S + W+ + L GE V+ D+ P ++ K++ R ++
Sbjct: 160 ----PASGKVNFALWLINKLENGESVKIVTDQFITPTLNTNLAKMVFECAER------KL 209
Query: 240 QLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQT 279
+ + ++ G RVSR + A E++ + P D S+D +K
Sbjct: 210 KGVFHLAGATRVSRFEFAKEIARVFGLDDSLITPSRMDEINWIAKRPRDSSLDTSKARNL 269
Query: 280 LNIDPVTYKDGVK 292
L+ P + +K
Sbjct: 270 LDEKPYELRKALK 282
>gi|220907960|ref|YP_002483271.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
gi|219864571|gb|ACL44910.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
Length = 292
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 138/287 (48%), Gaps = 42/287 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVA-ATHHSTPLPQLLLDALPHSFVFFDVDL 61
KK++LV G +G+LG +L Q +++ + + Y A + P F +DL
Sbjct: 2 KKKLLVTGASGFLGWNLCQ-MAQADWQVYGTGFAKNIQIP-----------GVHFRHIDL 49
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
++ L QPD V++ AA S P C+ +P + INV +S L+S +
Sbjct: 50 RNFVELKQFLLDI-QPDGVIHTAAQSNPNYCQLNPQESYEINVRTS--GDLASLCAEMDI 106
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+ STD V++G S Y+E D + P++VYG+ KVAAE+ I + R +++G
Sbjct: 107 PLVFTSTDLVFDGQHSPYRETDPVCPLSVYGEHKVAAERLIQNAHPGAVLARMPLMFG-- 164
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
++ +S IQ +L G++++ F DE R PV + +L + KQ +
Sbjct: 165 -VAASAQSF-IQPFVKILRSGQELKLFVDEFRTPVSAETAARGLLLILQ------KQFKG 216
Query: 242 LLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYK 288
+L++GG +R+SR Q + ++V+ L +DP K
Sbjct: 217 ILHLGGQERLSRYQFGQ----------------QMVEVLQLDPTLLK 247
>gi|345302764|ref|YP_004824666.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus
SG0.5JP17-172]
gi|345111997|gb|AEN72829.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus
SG0.5JP17-172]
Length = 308
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +R+L+ G G LGQ L+ LS+ YDV AT P P+ S + +D
Sbjct: 1 MIYQRILITGANGMLGQELVAQLSQ--HAEYDVLATARD-PEPRFR----GGSCGYVPLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F P VV+NCAA++ CE + ++ +NV + V L+
Sbjct: 54 ITDARAMRRIFQDF-TPTVVINCAAMTQVDRCEIEKEACWRVNVEA--VETLARLCRQFG 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIYG 179
LI +STD V++G Y+E D P+N YG+SK+A+E + E +AI R+ ++YG
Sbjct: 111 ARLIQVSTDFVFDGTAGPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
T + +S W+ LS+G ++ D+ R P YV D+
Sbjct: 171 --TGEQLSRSNIALWVIEQLSQGRRIRVVTDQWRTPTYVADL 210
>gi|428307793|ref|YP_007144618.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
gi|428249328|gb|AFZ15108.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 26/251 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+LV G +G+LG +L Q + + +D+ T+ S L L ++ L VDL
Sbjct: 2 KRILVTGASGFLGWNLCQ----LAKQEWDIYGTYWSNYLDILGVNML-------KVDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + QP +++ AALS P C+N+P+ + INV +S ++ N
Sbjct: 51 LEELKRIFQEI-QPAGIIHTAALSSPNFCQNNPEISHKINVVASCN--IAELAANYAIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V+ G+ + YKE D ++PVN+YG+ KV AE + ++ A+ R +++G
Sbjct: 108 VFTSTDLVFNGLNAPYKETDLVSPVNLYGEQKVMAEVGMLQRYPLTAVCRMPLMFG--VA 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
SP S IQ L +G+++ F DE R PV + + ++LAL +++Q
Sbjct: 166 SPTANSF-IQPFIQGLREGKELSLFTDEFRTPVSGKTAAQGLLLAL--------EKVQGY 216
Query: 243 LNVGGPDRVSR 253
+++GG +RVSR
Sbjct: 217 IHLGGKERVSR 227
>gi|37522690|ref|NP_926067.1| methionine adenosyltransferase [Gloeobacter violaceus PCC 7421]
gi|35213692|dbj|BAC91062.1| glr3121 [Gloeobacter violaceus PCC 7421]
Length = 295
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 38/259 (14%)
Query: 4 KRVLVVGGTGYLG----QHLLQGLSEIEGKPYDVAATHHSTPLP----QLLLDALPHSFV 55
KR+L+ G +G LG LQ E+ G + H PLP QL
Sbjct: 3 KRLLITGASGLLGFQVASRALQSGWEVVGT-----VSRHRCPLPIEQPQL---------- 47
Query: 56 FFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSF 115
D+ L+ S +A ++ +PD +V+CAA+S CE +P A+ +NV ++ L+
Sbjct: 48 --DLALEDLSELEAFVGRY-RPDALVHCAAISEAAQCEANPTVALRVNVAAT--EALART 102
Query: 116 TENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRS 174
+ +STD V++G ++ Y EE +P+ YG++K+AAE+ + E A ++R+
Sbjct: 103 AGRTGCRFVFVSTDLVFDGREAPYCEESLPSPLGCYGRTKMAAEQRVLELGDGGALVVRT 162
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
S++ GP SP + + + L+ G++ F DE R PVY D+ +L L S
Sbjct: 163 SLLLGP---SPSGARSVEERLGAQLAAGKRANLFTDEFRSPVYAPDLAAALLELVEAGQS 219
Query: 235 EDKQMQLLLNVGGPDRVSR 253
LL++GGP+R+SR
Sbjct: 220 G------LLHLGGPERLSR 232
>gi|406035354|ref|NP_001013492.2| methionine adenosyltransferase 2 subunit beta [Danio rerio]
Length = 323
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + +D ++ P F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFKNNDWDALGCGYNRARP-----------FFLKCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F QP V+V+CAA P V E ++AM++NV + + E + L
Sbjct: 64 EDAVRGVIQRF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACA----TLAKEAGGSFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E D P+N+YGKSK+ E+ I C AILR I++G +
Sbjct: 119 IYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAILRVPILFG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + V E H + R P Y DV ++ + R L +D+ ++ +
Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-QDQSLRGIF 235
Query: 244 NVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKL-VQTLNI 282
+ +++++ +M G Q P + ++ ++L + L++
Sbjct: 236 HYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSV 295
Query: 283 DPVTYKDGVKLTL 295
+ +K+ ++ +L
Sbjct: 296 ESTPFKNAIRDSL 308
>gi|428311109|ref|YP_007122086.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
gi|428252721|gb|AFZ18680.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
Length = 291
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 55/311 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++LV G +G+LG +L Q I + +D+ T H+ +P + L VDL
Sbjct: 2 KKLLVTGASGFLGWNLCQ----IAKQEWDIYGTSFSHAIEIPGITL---------LKVDL 48
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ F+ + F QPD V++ AA S P +C+++P+ + INV +S L+ +
Sbjct: 49 RD---FEELKRIFQEIQPDAVIHTAAQSSPNICQSNPEESHKINVTASCN--LAGLCADY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
STD V+ G+ + YKE D ++PVN+YG+ KV AE+ + E+ A+ R +++G
Sbjct: 104 SISCAFTSTDLVFNGLNAPYKETDSVSPVNLYGEQKVMAEEGMLERYPMTAVCRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
++ P +Q L +G+++ F DE R P K ++LAL ++
Sbjct: 164 ---VAAPPAQSFMQPFIQTLREGKELSLFTDEFRTPASGSTAAKGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLVQ 278
+ +++GG +R+SR A+V P D+S+D + +
Sbjct: 213 VNGRIHLGGKERMSRYDFGRSLVEVFELPSEGLKGCGQADVKMAASRPPDVSLD-SSMAF 271
Query: 279 TLNIDPVTYKD 289
L P++ ++
Sbjct: 272 DLGYAPLSLRE 282
>gi|307153579|ref|YP_003888963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
gi|306983807|gb|ADN15688.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
Length = 300
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 51/320 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG +L +I +D+ T+ + PL + +P VDL
Sbjct: 2 KKLLITGASGFLGGNL----GKIAASEWDIYGTYCAHPLTLKDVTLIP-------VDL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F ++ F + P V++ AA S P C+ P+ + INV +SL ++ +
Sbjct: 49 -TDFPSLKQLFAEVNPTAVIHTAAQSKPNFCQQYPEQSYRINVTASLN--IAGLCADYNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STD V+ G+ + YKE D ++P++ YG+ KV AE+ + + AI R +++G
Sbjct: 106 PCVFTSTDLVFNGLNAPYKETDPVSPISYYGEQKVLAEEGMRKIYPKTAICRMPLMFG-- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
SP +S WI S L++G+++ F DE R PV + ++LAL +++
Sbjct: 164 LSSPTAESFIQPWIKS-LNQGKEINLFIDEFRTPVSGSTAARGLLLAL--------EKVA 214
Query: 241 LLLNVGGPDRVSRVQ----MAEVDR----------------GVQSPADISMDITKLVQTL 280
+L++GG +++SR Q MAEV + PAD+S+D ++ + L
Sbjct: 215 GILHLGGVEKISRYQFGLLMAEVLQLPIDLIKSCRQKDLSFAAPRPADVSLDSSQAL-AL 273
Query: 281 NIDPVTYKDGVKLTLAAEAT 300
+P++ ++ +++ +++T
Sbjct: 274 GYNPLSLREELEIFKNSQST 293
>gi|198274918|ref|ZP_03207450.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135]
gi|198272365|gb|EDY96634.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides plebeius DSM
17135]
Length = 305
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 31/309 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++G G+ G+HLL + + H P + A + F+ D+ +
Sbjct: 3 KKILIIGANGFTGRHLLHAFAPKTDWQITGCSLH-----PDICPPACGYRFIQTDITHEE 57
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ QPDVVV+ AA+S E A ++NV + V WL+ E L
Sbjct: 58 EVEKLMEEV---QPDVVVHTAAMSATDYAETHHAEAQAVNVEA--VRWLAQSCEKHHCRL 112
Query: 124 IHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD V+ G S Y E D +PVN YG++K +EK + C ++AI R ++YG
Sbjct: 113 IHLSTDFVFGGDTSRLYTEADTPSPVNYYGRTKWESEKVVASLCRDYAIARIVVVYG--- 169
Query: 183 ISPVPKSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------- 231
+P P + + + L +++ D+ R P YV DVV+ + L +
Sbjct: 170 -APYPGQHGNIVSLVINRLQNHQEIRVADDQWRTPTYVGDVVQGVEKLIEQPVCGIYHIC 228
Query: 232 ---WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
++ + G DR + V A + P + I K + L P+T
Sbjct: 229 GGECMTVADMALRTADTLGLDRSLILPVHTAAMQEKTPRPRFSGLSIEKARRELGYRPLT 288
Query: 287 YKDGVKLTL 295
+++GV+ L
Sbjct: 289 FEEGVRSML 297
>gi|376007543|ref|ZP_09784738.1| putative dTDP-4-dehydrorhamnose reductase, rmlD-like [Arthrospira
sp. PCC 8005]
gi|375324179|emb|CCE20491.1| putative dTDP-4-dehydrorhamnose reductase, rmlD-like [Arthrospira
sp. PCC 8005]
Length = 293
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 131/269 (48%), Gaps = 30/269 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ + F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSEWEVYGTYNSSPV-------IESGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P CE +PD + INV ++ ++S
Sbjct: 52 LGDLKQVWEEI-KPDAVIHAAAASKPNFCEENPDISHKINVVAA--GDIASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINTYGEQKVKAEGEILARYPKAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S IQ L G + F DE R PV + + +L L+ +K++ +L
Sbjct: 167 SPHGGSF-IQGFIKTLKSGNCLNLFEDEFRTPVSGKTAARGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQ----MAEVDRGVQSPAD 268
++GG R+SR + MA+V + PAD
Sbjct: 220 HLGGKQRISRYEFGLLMAQV---LDLPAD 245
>gi|387791925|ref|YP_006256990.1| dTDP-4-dehydrorhamnose reductase [Solitalea canadensis DSM 3403]
gi|379654758|gb|AFD07814.1| dTDP-4-dehydrorhamnose reductase [Solitalea canadensis DSM 3403]
Length = 327
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 39/310 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+VL+ G G LGQ LL L Y V AT L + + +D+ +
Sbjct: 29 KKVLITGSNGLLGQKLLDKLRN--NSTYTVIATAKGVD------RYLEEGYSYESLDVTN 80
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ K +PD V++ AA++ CE+D + +NV + V + +
Sbjct: 81 HAEVIAIMQKH-KPDHVIHTAAMTNVDACESDKELCKKLNVDA--VQYFIEACKQTGAHF 137
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD +++G Y E P++ YG++K+ +E + +AILR+ I+YG +
Sbjct: 138 IHLSTDFIFDGADGPYDENAVANPLSYYGQTKLESELLLINSDIAYAILRTIIVYG--VV 195
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W L KG+K+ +D+ R P D+ I + L+ +K+ Q +
Sbjct: 196 KDMSRSNIILWAKGALEKGQKINVVNDQYRNPTLAEDLADICV------LAMEKRAQGIY 249
Query: 244 NVGGPDRVSRVQMAE--------------------VDRGVQSPADISMDITKLVQTLNID 283
N G D +S +++ E +++ + P + K V+ L +
Sbjct: 250 NASGKDFMSILEIVERVADFWNLDKSLITPISAETLNQSAKRPVKTEFILDKSVKELGYN 309
Query: 284 PVTYKDGVKL 293
P ++++G+K+
Sbjct: 310 PHSFEEGLKI 319
>gi|313676859|ref|YP_004054855.1| dtdp-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126]
gi|312943557|gb|ADR22747.1| dTDP-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126]
Length = 298
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L++ L G +A LP+ ++F +D+ S
Sbjct: 2 KILITGSNGLLGQKLVK-LIIANGGHELIATARGKNRLPK------ESGYIFESLDITSE 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+V + +PDV++N AA++ CE + + +NV + V L +E +
Sbjct: 55 QEVRSVIMNH-RPDVIINTAAMTNVDQCETEQEDCWKLNVTA--VKHLLKASEACNAFFL 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD +++G Y EE PV+ YG+SK+AAE+ I E ++AI R+ ++YG
Sbjct: 112 QLSTDFIFDGEDGPYTEEAIANPVSYYGESKLAAEQLILESKIDWAIARTVLVYG--IAH 169
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S I W+ L +G+ ++ D+ R P D+ K L L +K+ + + N
Sbjct: 170 DMSRSNIILWVKKSLEEGKDIQVVDDQWRTPTLAEDLAKGCL------LIAEKKAKGIYN 223
Query: 245 VGGPDRVSRVQMAEVDRGVQSPADISM---DITKLVQTLNIDPVT 286
+ G D ++ +MA + SM D TK QT P T
Sbjct: 224 ISGDDLLTPYEMAVKTAEFFNLPQTSMTKSDSTKFKQTAKRPPKT 268
>gi|82178568|sp|Q5BJJ6.1|MAT2B_DANRE RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|60688479|gb|AAH91455.1| Zgc:110308 [Danio rerio]
Length = 323
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + +D ++ P F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFKNNDWDALGCGYNRARP-----------FFLKCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V F QP V+V+CAA P V E ++AM++NV + + E + L
Sbjct: 64 EDAVRGVIQSF-QPHVIVHCAAERRPDVVERHTEAAMNLNVHACA----TLAKEAGGSFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E D P+N+YGKSK+ E+ I C A+LR I++G +
Sbjct: 119 IYISTDYVFDGRNPPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + V E H + R P Y DV ++ + R L +D+ ++ +
Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERAL-QDQSLRGIF 235
Query: 244 NVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKL-VQTLNI 282
+ +++++ +M G Q P + ++ ++L + L++
Sbjct: 236 HYSAKEQMTKYEMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSV 295
Query: 283 DPVTYKDGVKLTL 295
+ +K+ ++ +L
Sbjct: 296 ESTPFKNAIRDSL 308
>gi|268317519|ref|YP_003291238.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252]
gi|262335053|gb|ACY48850.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252]
Length = 308
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +R+L+ G G LGQ L+ LS YDV AT P P+ S + +D
Sbjct: 1 MLYQRILITGANGLLGQELVAQLSW--HAEYDVLATARD-PEPRFR----GGSCGYVPLD 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F P VV+NCAA++ CE + ++ +NV + V L+
Sbjct: 54 ITDARAVRRIFQDF-TPTVVINCAAMTQVDRCEIEKEACWRVNVEA--VETLARLCRQFG 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIYG 179
LI +STD V++G Y+E D P+N YG+SK+A+E + E +AI R+ ++YG
Sbjct: 111 ARLIQVSTDFVFDGTAGPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
T + +S W+ LS+G ++ D+ R P YV D+
Sbjct: 171 --TGEQLSRSNIALWVIEQLSQGRRIRVVTDQWRTPTYVADL 210
>gi|441499381|ref|ZP_20981567.1| dTDP-4-dehydrorhamnose reductase [Fulvivirga imtechensis AK7]
gi|441436914|gb|ELR70272.1| dTDP-4-dehydrorhamnose reductase [Fulvivirga imtechensis AK7]
Length = 301
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 23/256 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSF---VFFDVDL 61
++LV G G LGQ L++ L G +V AT ++ D LP S+ F +D+
Sbjct: 2 KILVTGSNGLLGQKLIKLLLSEPG--IEVIATARNS-------DRLPESYGNYEFAALDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ +V K+ PDVV+N AA++ CE++ ++ +NV + V++L E ++
Sbjct: 53 TDETQVLSVIKKYA-PDVVINTAAMTNVDQCESEKEACRKLNVDA--VSYLIKACEATDS 109
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD +++G + E ++ PVN YG+SK+AAE+ I + ++AI R+ ++YG
Sbjct: 110 HLVHCSTDFIFDGTRGPLDENEKPNPVNYYGESKLAAEELIEKSNISWAIARTVLVYG-- 167
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ +S I W+ + L G+ + D+ R P D+ +L K+
Sbjct: 168 IAHDMSRSNIILWVKNSLEGGKDINVVDDQWRTPTLAEDLA------MGCYLIAKKRATG 221
Query: 242 LLNVGGPDRVSRVQMA 257
+ N+ G D ++ MA
Sbjct: 222 IYNISGKDMLTPYDMA 237
>gi|407465567|ref|YP_006776449.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus sp.
AR2]
gi|407048755|gb|AFS83507.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus sp.
AR2]
Length = 296
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 45/311 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K R +V G G +G +++ LSE+ ++V + +H++ P + ++DL
Sbjct: 6 KMRFIVTGSAGLVGSQIVKDLSELN---HEVFSCYHNSK---------PDNGTLVNLDLT 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + K PD +++ AA++ CE PD AM IN ++ + L+ ++
Sbjct: 54 NQNEIIDTITKIN-PDSIIHLAAMTGVDQCEEQPDLAMKINADATEI--LARQAAKQKAF 110
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G KE D P+ YGKSK+A E + + S +AI R+S +G
Sbjct: 111 FVYVSTDYVFDGKTGMKKESDTPNPLGYYGKSKLAGELTLNKLASPYAIARTSTPFG--- 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ KS PI W+ L + + D+ P +V ++ K+++ + KQ+ +
Sbjct: 168 LHKTKKSFPI-WVKESLESNKDIPVLVDQITSPTFVPNLSKMLIEIAT------KQIVGI 220
Query: 243 LNVGGPDRVSR--------------------VQMAEVDRGVQSPADISMDITKLVQTLNI 282
+ G +SR M+E+ Q P D S+D++ + LN
Sbjct: 221 FHTAGASSISRYNLAEMIAEKLNLDKKYLKPASMSEMSWKAQRPKDSSLDVSLASELLNE 280
Query: 283 DPVTYKDGVKL 293
P T + + +
Sbjct: 281 KPQTIQQSLDI 291
>gi|301782821|ref|XP_002926826.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Ailuropoda melanoleuca]
Length = 334
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 29 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 85
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 86 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 130
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 131 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 188
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 189 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 247
Query: 243 LNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNID 283
+ G +++++ +MA G Q P + +D TKL +TL I
Sbjct: 248 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETLGIG 306
Query: 284 PVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 307 QRTPFRIGIKESL 319
>gi|281341458|gb|EFB17042.1| hypothetical protein PANDA_016526 [Ailuropoda melanoleuca]
Length = 313
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 8 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 65 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 110 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 168 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 226
Query: 243 LNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNID 283
+ G +++++ +MA G Q P + +D TKL +TL I
Sbjct: 227 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETLGIG 285
Query: 284 PVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 286 QRTPFRIGIKESL 298
>gi|403287074|ref|XP_003934782.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Saimiri
boliviensis boliviensis]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPKNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|301782819|ref|XP_002926825.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Ailuropoda melanoleuca]
Length = 323
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 18 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 74
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+ +
Sbjct: 75 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAASIGAF 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 120 LIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 178 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 236
Query: 243 LNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNID 283
+ G +++++ +MA G Q P + +D TKL +TL I
Sbjct: 237 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETLGIG 295
Query: 284 PVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 296 QRTPFRIGIKESL 308
>gi|410096384|ref|ZP_11291371.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides goldsteinii
CL02T12C30]
gi|409226348|gb|EKN19257.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides goldsteinii
CL02T12C30]
Length = 294
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 110/225 (48%), Gaps = 28/225 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDVDLKS 63
+ L++G G+ G+ +LQ LS G + H D P S F D+
Sbjct: 2 KTLIIGANGFTGRRILQHLSLCGGYELTGCSLHK---------DIQPESNTRFVQADIND 52
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +PDVV+N +ALSVP CE+ + A + NV + V + E + +
Sbjct: 53 HPVIGRLIGEM-RPDVVINASALSVPDYCESHHEEAHAANVLA--VENMVRCCEQEGSRF 109
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD V++G +S Y EED APVN YG SK E + CSN+A +R ++YG
Sbjct: 110 IHLSTDFVFDGKNRSLYIEEDIPAPVNYYGLSKYQGELAVAANCSNYANVRVVVVYG--- 166
Query: 183 ISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
K+LP +Q + + L G+++ D+ R P +V D+
Sbjct: 167 -----KALPGQHGNILQLVKNRLEAGQQIRVVSDQYRTPTWVEDI 206
>gi|13528837|gb|AAH05218.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 323
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNTQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|332238967|ref|XP_003268676.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Nomascus leucogenys]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|11034825|ref|NP_037415.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Homo
sapiens]
gi|383873001|ref|NP_001244402.1| methionine adenosyltransferase 2 subunit beta [Macaca mulatta]
gi|296192700|ref|XP_002744186.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Callithrix jacchus]
gi|397479289|ref|XP_003810957.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Pan paniscus]
gi|74719662|sp|Q9NZL9.1|MAT2B_HUMAN RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta; AltName: Full=Putative
dTDP-4-keto-6-deoxy-D-glucose 4-reductase
gi|75040945|sp|Q5R4E0.1|MAT2B_PONAB RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|6815285|gb|AAF28477.1| methionine adenosyltransferase regulatory beta subunit [Homo
sapiens]
gi|12052852|emb|CAB66599.1| hypothetical protein [Homo sapiens]
gi|55733390|emb|CAH93376.1| hypothetical protein [Pongo abelii]
gi|117646290|emb|CAL38612.1| hypothetical protein [synthetic construct]
gi|119581921|gb|EAW61517.1| methionine adenosyltransferase II, beta, isoform CRA_a [Homo
sapiens]
gi|189065444|dbj|BAG35283.1| unnamed protein product [Homo sapiens]
gi|343958844|dbj|BAK63277.1| methionine adenosyltransferase II, beta isoform 2 [Pan troglodytes]
gi|380811856|gb|AFE77803.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Macaca
mulatta]
gi|384942776|gb|AFI34993.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Macaca
mulatta]
gi|410214886|gb|JAA04662.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410255314|gb|JAA15624.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291404|gb|JAA24302.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291408|gb|JAA24304.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410335781|gb|JAA36837.1| methionine adenosyltransferase II, beta [Pan troglodytes]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|351700434|gb|EHB03353.1| Methionine adenosyltransferase 2 subunit beta [Heterocephalus
glaber]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHATGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|348574893|ref|XP_003473224.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Cavia porcellus]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|330689348|pdb|2YDX|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689349|pdb|2YDX|B Chain B, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689350|pdb|2YDX|C Chain C, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689351|pdb|2YDX|D Chain D, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
gi|330689352|pdb|2YDX|E Chain E, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit
Length = 315
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 3 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 49 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 164 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 223 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 281
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 282 RTPFRIGIKESL 293
>gi|218258294|ref|ZP_03474696.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii
DSM 18315]
gi|218225637|gb|EEC98287.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii
DSM 18315]
Length = 295
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 117/228 (51%), Gaps = 30/228 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G+ G+ +L LS G+ V + H P H+FV D++
Sbjct: 2 KKILVIGANGFAGRRILDKLSS-NGECEVVGCSLHPDIQP-----GEKHTFVRVDMN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV + F PDVV+NC+ALSVP CE + A +INV + V L+ E + +
Sbjct: 53 --DYPAVEVLFDHVCPDVVINCSALSVPDYCEQHREEAYAINVAA--VENLAHCCEQQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V++G Y EED AP+N YG +K E+ + C N+A+ R ++YG
Sbjct: 109 RFIHLSTDFVFDGKSDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
K+LP +Q + + L G+++ D+ R P +V D+
Sbjct: 168 -------KALPGQHGNILQLVKNRLEAGQEIRVVSDQYRTPTWVADIA 208
>gi|119581924|gb|EAW61520.1| methionine adenosyltransferase II, beta, isoform CRA_d [Homo
sapiens]
Length = 333
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 28 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 73
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 74 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 130
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 131 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 188
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 189 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 247
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 248 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 306
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 307 RTPFRIGIKESL 318
>gi|197102462|ref|NP_001126137.1| methionine adenosyltransferase 2 subunit beta [Pongo abelii]
gi|55730484|emb|CAH91964.1| hypothetical protein [Pongo abelii]
Length = 323
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|426350908|ref|XP_004043005.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Gorilla gorilla gorilla]
Length = 334
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|296413040|ref|XP_002836226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630035|emb|CAZ80417.1| unnamed protein product [Tuber melanosporum]
Length = 309
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+K V+V GGTG LG+ ++ EG + T +S P +L VD
Sbjct: 1 MSEKVVVVTGGTGQLGRQCVKAF---EGAKWKTIGTGYSRANPPAILK----------VD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L +G A L+ +P VVV+CAA P C+ DP+ +NV +S N L+ N++
Sbjct: 48 L-GNAGEVAGLLEEVKPKVVVHCAAERFPDKCDADPEGVKRLNVQAS--NSLAQECANRD 104
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+LI++STD V++G Y+ + P N YG++K+A E+ + + R ++Y
Sbjct: 105 IILIYISTDYVFDGKPGAAPYEADAATNPANFYGETKLAGEQAVLSAWRKSVVFRIPVLY 164
Query: 179 GPQTISPVPKSLPIQWIDSVLSKG--EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
G + +S +D VL+K E+VE H R P DV +++ + R+ S D
Sbjct: 165 G--EVEESKESAVNVLLDMVLNKAGKERVEMDHWSIRYPTNTSDVARVLKDVAERYTSAD 222
Query: 237 --KQMQLLLNVGGPDRVSRVQMAE 258
+ +L DR+++ ++ +
Sbjct: 223 DIDSLPKVLQFSSEDRMTKYEICQ 246
>gi|374374554|ref|ZP_09632213.1| dTDP-4-dehydrorhamnose reductase [Niabella soli DSM 19437]
gi|373233996|gb|EHP53790.1| dTDP-4-dehydrorhamnose reductase [Niabella soli DSM 19437]
Length = 295
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 147/310 (47%), Gaps = 35/310 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G +G ++++ L E Y+V A+ + L + + F +D
Sbjct: 2 KVLVTGANGLVGSYVIKQLLE---AGYEVYASSKNADLSSFAGE----RYHFRQMDFIDP 54
Query: 65 SG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
F+++ +P+VVV+ A+S P CE + A NV ++ L++ + +
Sbjct: 55 YAVLEVFESI-----RPEVVVHSGAMSKPDDCERNQADAYETNVAGTVQLLLNA--ADHK 107
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ I LSTD ++ G +KEED +P++ YG++K AE+ + E +++I+R+ +YG
Sbjct: 108 SFFIFLSTDFIFNGETGMHKEEDATSPLSYYGRTKQEAEEAVREYGHDWSIVRTVFVYGK 167
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------- 231
++ + + L K E +D+ R P YV D+ K ++A+ +
Sbjct: 168 PLYG---RNCFLTMLAGKLRKNEPFRVVNDQERTPTYVADLAKGVIAIIEKRATGIFHLS 224
Query: 232 ----WLSEDKQMQLLLNVG-GPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
+ MQ+ +G R+ V AE++ + P +DI+K L +PV+
Sbjct: 225 GSDVFTPYQMAMQVAKFMGIAQHRLEPVSSAELNELARRPLKSGLDISKARAVLGYEPVS 284
Query: 287 YKDGVKLTLA 296
+++G++ TL
Sbjct: 285 FEEGLRKTLG 294
>gi|117645018|emb|CAL37975.1| hypothetical protein [synthetic construct]
gi|261859642|dbj|BAI46343.1| methionine adenosyltransferase II, beta [synthetic construct]
Length = 334
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQCPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|332238969|ref|XP_003268677.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Nomascus leucogenys]
Length = 323
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|33519455|ref|NP_877725.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Homo
sapiens]
gi|350537901|ref|NP_001233495.1| methionine adenosyltransferase 2 subunit beta [Pan troglodytes]
gi|296192702|ref|XP_002744187.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Callithrix jacchus]
gi|397479291|ref|XP_003810958.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Pan paniscus]
gi|6006498|emb|CAB56837.1| dTDP-4-keto-6-deoxy-D-glucose 4-reductase [Homo sapiens]
gi|37182512|gb|AAQ89058.1| MAT2B [Homo sapiens]
gi|119581922|gb|EAW61518.1| methionine adenosyltransferase II, beta, isoform CRA_b [Homo
sapiens]
gi|343962313|dbj|BAK62744.1| methionine adenosyltransferase II, beta isoform 2 [Pan troglodytes]
gi|380811854|gb|AFE77802.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|383413005|gb|AFH29716.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|384942778|gb|AFI34994.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca
mulatta]
gi|410214884|gb|JAA04661.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410255312|gb|JAA15623.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410291406|gb|JAA24303.1| methionine adenosyltransferase II, beta [Pan troglodytes]
gi|410335779|gb|JAA36836.1| methionine adenosyltransferase II, beta [Pan troglodytes]
Length = 323
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|348574895|ref|XP_003473225.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Cavia porcellus]
Length = 323
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SEAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|17230828|ref|NP_487376.1| hypothetical protein alr3336 [Nostoc sp. PCC 7120]
gi|17132431|dbj|BAB75035.1| alr3336 [Nostoc sp. PCC 7120]
Length = 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 49/314 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG HL Q + + ++V T+ S L V+L
Sbjct: 2 QKLLITGASGFLGWHLCQ----VAQQEWEVYGTYCSHALS-------IQGIKLLKVNL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F + PD V++ AA S P C+ PD + INV +S L+
Sbjct: 49 -TDFSEIKQIFNEIKPDAVIHTAAQSQPNFCQIHPDESYKINVTASCN--LAELCATSSI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
S++ V++GV S YKE D + PVN+YG+ KV AE I E+ I R +++G
Sbjct: 106 PYAFTSSELVFDGVNSPYKETDTVCPVNIYGEQKVLAEVGILERYPIATICRMPLMFGNA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T P KS IQ L G+++ F DE R PV K IL + +
Sbjct: 166 T--PTAKSF-IQPFIQTLQSGQELTLFIDEFRTPVSGTTAAKGILLTLGK-------VTG 215
Query: 242 LLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQTLN 281
L+++GG +R+SR +V+ PAD+S+D ++ L
Sbjct: 216 LIHLGGKERISRYDFGHILAAVFQLPTTGIKACLQRDVNMAAPRPADVSLDSSQAF-ALG 274
Query: 282 IDPVTYKDGVKLTL 295
P++ K ++ L
Sbjct: 275 YQPLSIKSELEALL 288
>gi|62901974|gb|AAY18938.1| DKFZp564B246 [synthetic construct]
Length = 358
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 53 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 98
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 99 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 155
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 156 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 213
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 214 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 272
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 273 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 331
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 332 RTPFRIGIKESL 343
>gi|426350910|ref|XP_004043006.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Gorilla gorilla gorilla]
Length = 323
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|345007358|ref|YP_004810210.1| dTDP-4-dehydrorhamnose reductase [halophilic archaeon DL31]
gi|344322984|gb|AEN07837.1| dTDP-4-dehydrorhamnose reductase [halophilic archaeon DL31]
Length = 296
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LVVG G LG ++++ E + + + +A T+HST P + P +DL
Sbjct: 2 RLLVVGANGLLGSNVVR---EGQQRGWSIAGTYHST-QPAFEIPLTP-------LDLGES 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
FD + L PDVVVNCAA++ CE DP+SA S+N P ++ ++ +
Sbjct: 51 DTFDDI-LDRHDPDVVVNCAAMTDVDGCETDPESAHSLNGDAPGTIAAQCAA----RGIE 105
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H+STD V++G + Y E + PV VYG+SK A E+ + E+ + + R S ++G
Sbjct: 106 FVHVSTDYVFDGTERDPYSESADPNPVQVYGESKFAGERAVREEVPDALVARLSFVWGIH 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK---- 237
P W+ L GE V F D+ P + +L L +++D
Sbjct: 166 RSRGDLTGFPA-WVRDRLQAGEDVPLFTDQWVTPTRAGQAAETLLDL----IAQDAGGLV 220
Query: 238 -------------QMQLLLNVGGPDR-VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
++ +VG + +S MA+V+R P +D+ + TL+
Sbjct: 221 HVACSSCVTPYEFGAEIAEHVGADEELLSEGSMADVERDAPRPTYSCLDVGTVESTLDRP 280
Query: 284 PVTYKDGVK 292
T ++ ++
Sbjct: 281 QPTLREDIE 289
>gi|443325201|ref|ZP_21053907.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
gi|442795179|gb|ELS04560.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
Length = 293
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 37/261 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++LV G +G+LG +L Q S E+ G Y A L Q VD
Sbjct: 2 KKLLVTGASGFLGWNLCQEASAKWEVFGAYYSHAVKIAGVTLSQ--------------VD 47
Query: 61 LKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
L+ F A+ +PD V++ AA S P C+ +P + INV +S VN ++
Sbjct: 48 LREYEQLKELFSAI-----KPDAVIHSAAASKPNYCQQNPQESYEINVTAS-VN-IAKLC 100
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ STD V++G SFY+E D + P+ +YG+ KV AE+ + +I R +
Sbjct: 101 AEYQIPCAFTSTDLVFDGQGSFYQESDRVCPICIYGEQKVLAEQKMLSVYPKVSICRMPL 160
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
++G SPV S +Q S L G+++ F DE R P I A L+ +
Sbjct: 161 MFG--LPSPVANSF-LQGFISSLKAGQELNLFVDEFRTP------ASAIAAAQGLLLAIE 211
Query: 237 KQMQLLLNVGGPDRVSRVQMA 257
KQ+ +L++GG +RVSR +
Sbjct: 212 KQVSGILHLGGRERVSRYEFG 232
>gi|291387772|ref|XP_002710405.1| PREDICTED: methionine adenosyltransferase II, beta isoform 1
[Oryctolagus cuniculus]
Length = 334
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SDAVHHIIHEF-QPHVIVHCAAERRPDVVENQPDAASQLNVNAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|390941974|ref|YP_006405735.1| dTDP-4-dehydrorhamnose reductase [Belliella baltica DSM 15883]
gi|390415402|gb|AFL82980.1| dTDP-4-dehydrorhamnose reductase [Belliella baltica DSM 15883]
Length = 309
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 37/310 (11%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
SKK +L+ G G LGQ L+ L +E + V T L + L + +D+
Sbjct: 5 SKKTILITGANGLLGQKLV--LQILEEDQFIVIPTG----LGDCRITDLRAKDRWKSLDI 58
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + F +PD V+N AA++ +CE + ++ + +N+ VN L E ++
Sbjct: 59 TNRDEVLDLFESF-KPDFVINTAAMTNVDICEAEKNTCVKLNIYG--VNNLIHACETLKS 115
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+HLSTD +++G Y EED PVN YG +K+ AE+ I ++I+R+ ++YG
Sbjct: 116 HLVHLSTDFIFDGEAGPYSEEDAPNPVNYYGWTKMKAEENIKNAKIKWSIIRTVLVYG-- 173
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S I W+ + L KGE ++ +D+ R P D+ + L L KQ +
Sbjct: 174 IANDMSRSNIILWVKNSLEKGETLQLVNDQFRTPTLAEDLAEGCL------LVIKKQAEG 227
Query: 242 LLNVGGPDRVSRVQMA-------EVDRG-------------VQSPADISMDITKLVQTLN 281
+ N+ G D ++ MA +D+ + P I K + L
Sbjct: 228 VFNISGKDLLTPYDMAIATADYFNLDKSKIKKTNSKAFTQKAKRPMKTGFIIDKAINNLG 287
Query: 282 IDPVTYKDGV 291
P ++ DG+
Sbjct: 288 YSPKSFMDGI 297
>gi|414078574|ref|YP_006997892.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
gi|413971990|gb|AFW96079.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
Length = 291
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 38/263 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL------LLDALPHSFVFF 57
K++L+ G +G+LG HL Q L+++ + Y TH +P + L D +F
Sbjct: 2 KKLLITGVSGFLGWHLCQ-LAQLGWEVYGTYHTHF-LEIPDMKMVKVNLTDFQELKGIFN 59
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+ +PD V++ AA S P C+ + INV +S ++
Sbjct: 60 DI----------------KPDAVIHTAAQSQPNYCQLHSQESYKINVTASCD--IAGLCA 101
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ L STD V++G+ + Y+E D+++PVN+YG+ KV AE I + AI R ++
Sbjct: 102 DNSLPLAFTSTDLVFDGLNAPYQEIDQVSPVNIYGEQKVEAEAGILKVYPQAAICRMPLM 161
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSED 236
+G +T P KS Q+I +L G+++ F DE R PV K ++LAL
Sbjct: 162 FGRET--PTAKSFIQQFI-QILKDGKELSLFIDEFRTPVSANTAAKGLLLAL-------- 210
Query: 237 KQMQLLLNVGGPDRVSRVQMAEV 259
+++ ++++GG +R+SR + ++
Sbjct: 211 EKVNGIIHLGGKERISRYEFGKI 233
>gi|158257270|dbj|BAF84608.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWRQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|291387774|ref|XP_002710406.1| PREDICTED: methionine adenosyltransferase II, beta isoform 2
[Oryctolagus cuniculus]
Length = 323
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SDAVHHIIHEF-QPHVIVHCAAERRPDVVENQPDAASQLNVNAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|345799405|ref|XP_003434556.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Canis lupus familiaris]
Length = 334
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 26 LPNRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 85
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 127
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 128 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 188 --EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 244
Query: 240 QLLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTL 280
+ + G +++++ +MA G Q P + +D TKL +TL
Sbjct: 245 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETL 303
Query: 281 NIDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|345799407|ref|XP_536439.3| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Canis lupus familiaris]
Length = 323
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 15 LPNRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 74
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 116
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 117 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 176
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 177 --EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 233
Query: 240 QLLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTL 280
+ + G +++++ +MA G Q P + +D TKL +TL
Sbjct: 234 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETL 292
Query: 281 NIDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 293 GIGQRTPFRIGIKESL 308
>gi|291567036|dbj|BAI89308.1| putative methionine adenosyltransferase [Arthrospira platensis
NIES-39]
Length = 293
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 30/269 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSRWEVYGTYNSSPVTD-------SGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+ +PD + INV ++ ++S
Sbjct: 52 LGDLKEVWEEI-KPDAVIHAAAASKPNFCQENPDISHKINVVAA--GDMASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N+YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S +Q L G + F DE R PV K +L L+ +K++ +L
Sbjct: 167 SPHGGSF-MQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQ----MAEVDRGVQSPAD 268
++GG R+SR + MA+V + PAD
Sbjct: 220 HLGGKQRISRYEFGLLMAQV---LDLPAD 245
>gi|409993284|ref|ZP_11276431.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
gi|409935863|gb|EKN77380.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
Length = 293
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 30/269 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 3 QKLLVTGASGFLGWNICQ----VAKSRWEVYGTYNSSPVTD-------SGVKFIKTDLTV 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+ +PD + INV ++ ++S
Sbjct: 52 LGDLKEVWEEI-KPDAVIHAAAASKPNFCQENPDISHKINVVAA--GDMASLCGAAGIPY 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ Y+E D + P+N+YG+ KV AE I + AI R ++YG
Sbjct: 109 VFTSTDLVFDGLNPPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYG--IA 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S +Q L G + F DE R PV K +L L+ +K++ +L
Sbjct: 167 SPHGGSF-MQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKGLL------LAIEKKVNGIL 219
Query: 244 NVGGPDRVSRVQ----MAEVDRGVQSPAD 268
++GG R+SR + MA+V + PAD
Sbjct: 220 HLGGKQRISRYEFGLLMAQV---LDLPAD 245
>gi|224539746|ref|ZP_03680285.1| hypothetical protein BACCELL_04655, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224518646|gb|EEF87751.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus
DSM 14838]
Length = 289
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 105/221 (47%), Gaps = 15/221 (6%)
Query: 12 TGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAV 70
G+ G+ +L LS Y V H P D+ + F+ D+ G +
Sbjct: 1 NGFTGRRILNDLSR--NDEYIVTGCSLHDDIAP----DSGNYRFISADI---CQMGEQSA 51
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
+ +P++V+N +ALSVP CE + A SINV + V L+ E IHLSTD
Sbjct: 52 LFREVRPNIVINTSALSVPDYCEAHREEADSINV--NAVGQLAFRCEASAARFIHLSTDF 109
Query: 131 VYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V+ G Y EED PVN YG +K+ EK + E CSN+AI R ++YG P
Sbjct: 110 VFNGDTGQLYTEEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGAAL--PGQHG 167
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+Q + + L E++ D+ R P YV DV + I L N
Sbjct: 168 NILQLVANRLRNNEEIRVVSDQWRTPTYVGDVSQGIEKLIN 208
>gi|440911435|gb|ELR61106.1| Methionine adenosyltransferase 2 subunit beta [Bos grunniens mutus]
Length = 334
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+ E
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAEAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAQRPRNAQLDCSRL-ETLG 304
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 305 IGQRTPFRIGIKESL 319
>gi|218664471|ref|NP_001136304.1| methionine adenosyltransferase 2 subunit beta [Sus scrofa]
gi|198448579|gb|ACH88506.1| methionine adenosyltransferase 2beta [Sus scrofa]
Length = 334
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIYDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y+EED +P+N YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISTDYVFDGKNPPYREEDMPSPLNPYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNPPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|355701312|gb|AES01642.1| methionine adenosyltransferase II, beta [Mustela putorius furo]
Length = 312
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 8 RRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 65 -------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALIGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 110 LIYISSDYVFDGTDPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 168 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRVPTHVKDVATVCRQLAEKRML-DPSIKGT 226
Query: 243 LNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNID 283
+ G +++++ +MA G Q P + +D TKL +TL I
Sbjct: 227 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCTKL-ETLGIG 285
Query: 284 PVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 286 QRTPFRIGIKESL 298
>gi|209522781|ref|ZP_03271339.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|423063314|ref|ZP_17052104.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|209496830|gb|EDZ97127.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|406715436|gb|EKD10592.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 293
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G +G+LG ++ Q + ++V T++S+P+ F DL
Sbjct: 4 KLLVTGASGFLGWNICQ----VAKSEWEVYGTYNSSPVTD-------SGVKFIKTDLTVL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V + +PD V++ AA S P CE +PD + INV ++ ++S +
Sbjct: 53 GDLKQVWEEI-KPDAVIHAAAASKPNFCEENPDISHKINVVAA--GDMASLCGAAGIPYV 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G+ Y+E D + P+N YG KV AE I + AI R ++YG S
Sbjct: 110 FTSTDLVFDGLNPPYRETDLVCPINTYGGQKVKAEGEILARYPKAAICRMPLMYG--IAS 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P S IQ L G + F DE R PV + +L L+ +K++ +L+
Sbjct: 168 PHGGSF-IQGFIKTLKSGNCLNLFEDEFRTPVSGTTAARGLL------LAIEKKVNGILH 220
Query: 245 VGGPDRVSRVQ----MAEVDRGVQSPAD 268
+GG R+SR + MA+V + PAD
Sbjct: 221 LGGKQRISRYEFGLLMAQV---LDLPAD 245
>gi|294507877|ref|YP_003571935.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
gi|294344205|emb|CBH24983.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8]
Length = 307
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 126/260 (48%), Gaps = 23/260 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M RVL+ G G LGQ L+ LS+ + YDV AT P+ + + DV
Sbjct: 1 MLFNRVLITGANGLLGQALVHRLSQ--NREYDVLATARDDA-PRFEDGSC--GYAPLDV- 54
Query: 61 LKSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D VA F PDVVVNCAA++ C+ A ++N + V L+
Sbjct: 55 ----TQPDDVAQIFEDFTPDVVVNCAAMTDVGRCDEHRSEAWAVN--ARAVKTLAKHCRT 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSII 177
L+ +STD V+ G + Y E+ PVN YG++K+A E + E +N+AI+R+ ++
Sbjct: 109 SGARLVQVSTDFVFNGKRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLL 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG T + +S + W+ LS+GE + D+ R P +V D+ I L +
Sbjct: 169 YG--TGRDLRRSNIVLWVADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLH------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMA 257
+ + +V G D VS ++A
Sbjct: 221 EATGIYHVSGADMVSVYELA 240
>gi|432098886|gb|ELK28381.1| Methionine adenosyltransferase 2 subunit beta [Myotis davidii]
Length = 316
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + P+ F V+L
Sbjct: 11 RRVLITGATGLLGRAVYK---EFHQNNWHAVGCGFRRARPK-----------FEHVNLLD 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 57 ANAVHHIIYDF-QPHVIVHCAAERRPDVVENQPDAAAQLNVDAS--GNLAKEAAAIGAFL 113
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 114 IYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG--EV 171
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 172 EKLEESSVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 230
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 231 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPKNSQLDCSKL-ETLGIGQ 289
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 290 RTPFRIGIKESL 301
>gi|423342692|ref|ZP_17320406.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
gi|409216947|gb|EKN09926.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
Length = 295
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 116/228 (50%), Gaps = 30/228 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV+G G+ G+ +L LS G+ V + H P H+FV D++
Sbjct: 2 KKILVIGANGFAGRRILDKLSS-NGECEVVGCSLHPDIQP-----GEKHTFVRVDMN--- 52
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV + F PDVV+NC+ALSVP CE + A + NV + V L+ E + +
Sbjct: 53 --DYPAVEVLFDHVCPDVVINCSALSVPDYCEQHREEAYATNVAA--VENLAHCCEQQGS 108
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD V++G Y EED AP+N YG +K E+ + C N+A+ R ++YG
Sbjct: 109 RFIHLSTDFVFDGKSDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYG- 167
Query: 181 QTISPVPKSLP------IQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
K+LP +Q + + L G+++ D+ R P +V D+
Sbjct: 168 -------KALPGQHGNILQLVKNRLEAGQEIRVVSDQYRTPTWVADIA 208
>gi|218438541|ref|YP_002376870.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
gi|218171269|gb|ACK70002.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
Length = 295
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 51/311 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G +G+LG +L Q I +++ T++S + ++ F VDL
Sbjct: 3 RVLITGASGFLGWNLCQ----IAQTSWEIYGTYYSHAIQSPNVN-------FLKVDL--- 48
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F+ + F P V++ AA S P C+ P+ + INV +SL ++ + +
Sbjct: 49 TDFNNLKQLFADVNPTGVIHLAAQSKPNFCQQYPEPSYLINVTTSLN--IAGLCADYDIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ STD V++G+ YKE D ++P++ YG+ KV AE+ + ++ I R +++G
Sbjct: 107 CVFTSTDLVFDGLNPPYKETDPVSPISYYGEQKVLAEQGMLQRYPKTVICRMPLMFG--F 164
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
SPV S IQ + L +G++++ F DE R PV K ++LAL ++ +
Sbjct: 165 PSPVADSF-IQSFLTTLQQGKELKLFIDEWRTPVSGSTAAKGLLLAL--------EKGER 215
Query: 242 LLNVGGPDRVSRVQ----MAEVDR----------------GVQSPADISMDITKLVQTLN 281
+L++GG +R+SR + MAEV + P D+S+D +K L
Sbjct: 216 ILHLGGKERISRYEFGGLMAEVLQLKTELIKPCSQKDVIMAAPRPTDVSLDSSKAF-ALG 274
Query: 282 IDPVTYKDGVK 292
+P++ ++ ++
Sbjct: 275 YEPLSLREELQ 285
>gi|417399128|gb|JAA46594.1| Putative methionine adenosyltransferase 2 subunit beta [Desmodus
rotundus]
Length = 334
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPR-----------FEHVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + F QP V+V+CAA P V E PD+A +NV +S L+ L
Sbjct: 75 SSAVHHIIYDF-QPHVIVHCAAERRPDVVETQPDAAAQLNVDAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPCPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPISHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|395817686|ref|XP_003782290.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Otolemur
garnettii]
Length = 298
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLVTGATGLLGRAVFK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIVHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 235 GTFHWSGNEQMTKYEMA 251
>gi|90102185|gb|ABD85290.1| methionine adenosyltransferase II beta variant 2 [Homo sapiens]
Length = 306
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 24/295 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 121 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMA-EVDRGVQSPAD-ISMDITKLVQTLNIDPVT-YKDGVKLTL 295
+ G +++++ +MA + P+ + D +KL +TL I T ++ G+K +L
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPDCSKL-ETLGIGQRTPFRIGIKESL 291
>gi|345569802|gb|EGX52628.1| hypothetical protein AOL_s00007g411 [Arthrobotrys oligospora ATCC
24927]
Length = 298
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 29/289 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+KK+VLV G TG LG+ +++ E +DV T S P +L +D
Sbjct: 1 MAKKKVLVTGATGLLGRQVVRAFDEAG---WDVIGTGFSRANPPRILK----------LD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + V L +P ++++CAA P C +DPD ++NV +S + L+ T +
Sbjct: 48 ITNQEDVEKV-LDDVKPAIIIHCAAEKSPDRCASDPDGTKALNVAASQL--LAEQTAARN 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+L+++STD V++G + Y+ + E +P N YG++K E + + +LR +++
Sbjct: 105 IVLVYISTDYVFDGTPGGAPYETDAETSPPNFYGETKRDGEIAVIKASDRAVVLRVPLLF 164
Query: 179 GPQTISPVPKSLPIQWIDSVLSKG--EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
G S +S ID++ +K EKV+ H R P DV +++ + ++ SED
Sbjct: 165 GSGDNS---ESAVNVLIDTIWNKSGKEKVDMDHWAIRYPTNTEDVARVLKDIAEKYTSED 221
Query: 237 -KQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
++ +L DR ++ ++ E R Q+ + + + +V +DP
Sbjct: 222 PTKLPRILQFSSEDRCTKYEICE--RLAQA---LGLPMPHIVANSTVDP 265
>gi|255036982|ref|YP_003087603.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053]
gi|254949738|gb|ACT94438.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053]
Length = 300
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 42/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPH--SFVFFD 58
M KK++L+ G G LGQ L+ L V+ H T + LP + + +
Sbjct: 1 MEKKKILITGSNGLLGQKLVALL---------VSKAHIETIATARGENRLPFQTGYRYVE 51
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+D+ D V L +P V+++ AA++ CE + D+ +NV ++ L +
Sbjct: 52 MDITDPESVDRV-LDVERPHVLIHTAAMTNVDQCEIEKDACWKLNVTAT--ETLVAACAK 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ L H+STD V++G Y+E+D PV+ YG SK AAEK + +AI R+ ++Y
Sbjct: 109 YKIFLEHVSTDFVFDGTSGPYREQDVPNPVSFYGWSKYAAEKAVMSSDIEWAIARTVLVY 168
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + +S I W+ L +G+ ++ D+ R P D LAL +L D++
Sbjct: 169 G--IAHDMSRSNIILWVKKSLEEGKAIKVVTDQFRTPTLAED-----LAL-GCFLIADQE 220
Query: 239 MQLLLNVGGPDRVSRVQMA-------EVDRGVQSPADIS-------------MDITKLVQ 278
+ + ++ G D ++ +MA +D + SP D S +TK
Sbjct: 221 AKGIYHISGKDFLTPYEMALATAEYFGLDASLISPTDASAFTQPARRPPRTGFKLTKASN 280
Query: 279 TLNIDPVTYKDGVKL 293
L +P ++++G+ +
Sbjct: 281 VLGYEPHSFREGIAI 295
>gi|45219849|gb|AAH66645.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 334
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL + L I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-EILGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|355750400|gb|EHH54738.1| hypothetical protein EGM_15630 [Macaca fascicularis]
Length = 357
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 137/312 (43%), Gaps = 58/312 (18%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + + H+
Sbjct: 69 RRVLVTGATGLLGRAVHKEFQQ---------NNWHAV----------------------- 96
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G GF KF QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 97 GCGFRRARPKFDQPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 154
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 155 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 212
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R +V++V + L + + D ++
Sbjct: 213 EKLEESAVTVMFDKVQFSNKSANMDHQQQRFLTHVKEVATVCRQLAEKRML-DPSIKGTF 271
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 272 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 330
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 331 RTPFRIGIKESL 342
>gi|428211935|ref|YP_007085079.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
gi|428000316|gb|AFY81159.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
Length = 291
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 47/306 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG +L Q +++ + + +H T LP L VDL
Sbjct: 2 KKLLITGSSGFLGWNLCQ-VAQANWQVFGTYCSHKIT-LPGCEL---------MPVDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
++ L+ PD V++ AA S P VC+ P+ + INV ++ + L+ + E
Sbjct: 51 FPALKSLFLEIC-PDAVIHAAAQSQPNVCQTYPEDSYKINVTAA--SDLAGLCGDAEIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I STD V++G+ Y E D + PV+ YG+ KV AE + ++ + R +++G
Sbjct: 108 IFTSTDLVFDGLNPPYAETDAVCPVSRYGEQKVQAEGEMRDRNPQTIVCRMPLMFGEG-- 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
PV +S +Q + L G+ + F DE R PV + + ++LAL KQ + L
Sbjct: 166 GPVAQSF-LQPMLQTLRSGQDLALFIDEFRTPVSGKTAAQGLLLAL--------KQNEKL 216
Query: 243 LNVGGPDRVSR-------VQMAEVDRG-------------VQSPADISMDITKLVQTLNI 282
L++GG +RVSR +++ EV +G P D+S+D +K L
Sbjct: 217 LHLGGKERVSRYSFFEQVIEVLEVQQGRIKPCRQQDVKMSAPRPPDVSLDSSKAF-NLGY 275
Query: 283 DPVTYK 288
+P++ +
Sbjct: 276 NPLSLR 281
>gi|354565752|ref|ZP_08984926.1| dTDP-4-dehydrorhamnose reductase [Fischerella sp. JSC-11]
gi|353548625|gb|EHC18070.1| dTDP-4-dehydrorhamnose reductase [Fischerella sp. JSC-11]
Length = 289
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 127/252 (50%), Gaps = 30/252 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G +G+LG HL Q L+ ++ + Y TH + +P L V+L
Sbjct: 4 KLLVTGASGFLGWHLCQ-LANLDWEVYGTYLTH-AVEIPNTKLQ---------KVNL--- 49
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F + F QP V++ AA S P C+N P+ + + NV S ++ +
Sbjct: 50 TNFQELKQIFNEIQPAAVIHTAAQSQPNYCQNHPEESYATNVIVS--QNIADLCADASIP 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ STD V++G+ Y+E D + PVN YG+ KV AE + E+ A+ R +++G T
Sbjct: 108 CVFTSTDLVFDGLNPPYRETDPVCPVNRYGEQKVMAEVGMLERYPMTAVCRMPLMFGAAT 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P S IQ L +G++++ F DE R PV K ++LAL +++Q
Sbjct: 168 --PTATSF-IQPFIKTLQEGKELKLFLDEFRTPVSATTAAKGLLLAL--------EKVQG 216
Query: 242 LLNVGGPDRVSR 253
++++GG +R+SR
Sbjct: 217 IIHLGGQERISR 228
>gi|425459945|ref|ZP_18839431.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9808]
gi|389827492|emb|CCI21189.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9808]
Length = 292
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 148/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K AT + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWATFGTY---------LNHNVNSNDRNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D VA+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLVAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|425456839|ref|ZP_18836545.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9807]
gi|389801969|emb|CCI18926.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9807]
Length = 292
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KRLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV++YG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSIYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPRQQIRPCLQCDVTMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSNK 281
>gi|440751357|ref|ZP_20930590.1| dTDP-4-dehydrorhamnose reductase [Mariniradius saccharolyticus AK6]
gi|436479999|gb|ELP36264.1| dTDP-4-dehydrorhamnose reductase [Mariniradius saccharolyticus AK6]
Length = 309
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 143/314 (45%), Gaps = 42/314 (13%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
K R+LV G G LGQ L+ L E+E A+ + LP+ A S+ + +
Sbjct: 5 KLRILVTGANGLLGQKLVNALKRDPEVE----LFASGKGESRLPK----AWDGSYHWISI 56
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ S G A QP +++ AA++ CE D + + NV + V L + E
Sbjct: 57 DV-SDKGQVENAFAEIQPHTLIHTAAMTQVDDCEKDKEGCWNANVIA--VANLVAAAEVY 113
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ +H+STD +++G Y E+ + PVN YG SK+AAE+ + + + +AI R+ ++YG
Sbjct: 114 QTHFVHVSTDFIFDGENGPYTEDADPNPVNFYGWSKLAAERLVMKAKTPWAIARTILVYG 173
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ L +G+ ++ +D+ R P D+ + L K
Sbjct: 174 --IAQDMSRSNIILWVKKSLEQGKTIQVVNDQWRTPTLAEDLADGCI------LIAKKGA 225
Query: 240 QLLLNVGGPDRVSRVQMA-------EVDRGV-------------QSPADISMDITKLVQT 279
+ N+ G D ++ QMA +D+G+ + P I K V+
Sbjct: 226 TGVFNISGKDLLTPYQMAVMTADYFGLDKGLIQESNSRLFTQPAKRPPKTGFIIDKAVRD 285
Query: 280 LNIDPVTYKDGVKL 293
L P ++ DG+ +
Sbjct: 286 LGYAPKSFSDGIGI 299
>gi|62205265|gb|AAH93030.1| Methionine adenosyltransferase II, beta [Homo sapiens]
Length = 334
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E D AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 132 IYISSDYVFDGTNPPYREGDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|392969674|ref|ZP_10335089.1| dTDP-4-dehydrorhamnose reductase [Fibrisoma limi BUZ 3]
gi|387841868|emb|CCH57147.1| dTDP-4-dehydrorhamnose reductase [Fibrisoma limi BUZ 3]
Length = 303
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 24/258 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHS--FVFFDV 59
KKR+L+ G G LGQ L+ L++ +P D+ AT + LP+S + + +
Sbjct: 2 KKRMLLTGANGLLGQKLVGLLTQ---QPNIDLIATARGA-------NRLPYSEGYTYQPM 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ V + QP VV++ AA++ CE+ D+ + NV + V +L
Sbjct: 52 DITDRQQVLDV-ISETQPQVVIHTAAMTDVDKCESQKDACWAQNVQA--VEYLVEACRAT 108
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 109 NTFLLHVSTDFIFDGTAGPYDEEAEGNPISFYGWSKYAAEKVVIHSGLRWAIARTVLVYG 168
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ L +G+ ++ D+ R P D+ T +L D++
Sbjct: 169 --IAHDMSRSNIILWVKKSLEEGKNIKVVTDQWRSPTLAEDLA------TGCYLIGDQEA 220
Query: 240 QLLLNVGGPDRVSRVQMA 257
+ + N+ G + ++ +MA
Sbjct: 221 EGIFNISGKEVLTPYEMA 238
>gi|72012984|ref|XP_783113.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Strongylocentrotus purpuratus]
Length = 300
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+VLV G +G +G+ L++ E E P DV S L VD++
Sbjct: 2 KVLVTGASGLMGRALMR---EFERTPSCDVLGLAFSRAKGSLR-----------KVDIRD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F QPD +V+ A P V E D ++A +N S ++ + L
Sbjct: 48 EGEVRKVMQEF-QPDAIVHAAVQRRPDVVEKDEEAAKKVNC--SATETIAKISAEMGTFL 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G K YK D P+N YG+ K+ EK N AILR ++YG I
Sbjct: 105 IYISTDYVFDGTKPPYKPTDATNPLNKYGQQKLEGEKISQAHAPNCAILRVPVLYG--QI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDEC-RCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
V +S +++++++ EK + D C RCP V D+ + + RW ++ K M +
Sbjct: 163 ETVEESAVTVLLNTLVNR-EKTDMIDDCCTRCPTSVDDIAVVCRQMCERWKTDPKTMSGV 221
Query: 243 LNVGGPDRVSRVQM 256
+ G + +++ M
Sbjct: 222 FHWCGSEFMTKYTM 235
>gi|410949346|ref|XP_003981384.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Felis catus]
Length = 334
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 26 LPSRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 85
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 127
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 128 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 187
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 188 --EVEKLDESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 244
Query: 240 QLLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTL 280
+ + G +++++ +MA G Q P + +D +KL +TL
Sbjct: 245 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETL 303
Query: 281 NIDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 304 GIGQRTPFRIGIKESL 319
>gi|448569892|ref|ZP_21638975.1| RmlD substrate binding domain superfamily protein [Haloferax
lucentense DSM 14919]
gi|445723696|gb|ELZ75333.1| RmlD substrate binding domain superfamily protein [Haloferax
lucentense DSM 14919]
Length = 300
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 28/235 (11%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFDVD 60
V G G LG ++Q L G+ +V +HS PL Q+ + D
Sbjct: 4 FVTGANGLLGSVVVQAL---RGQGREVVGGYHSAAPAFDCPLHQVDITDTERVVELLDE- 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+D DVV+NCAA + CE++P+ A ++N + L++ ++ E
Sbjct: 60 ------YDV--------DVVINCAAYTDVDGCESNPEVATAVN--GTAPGDLAAVCDDHE 103
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H STD V++G +FY+E DE AP+ YG+SK+A E + E ++ ILR S +YG
Sbjct: 104 IPFVHYSTDYVFDGETDTFYEEADEPAPIQEYGRSKLAGEHAVREVNADALILRLSFVYG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ + P QW+ S L+ G+ V F D+ P +V L L N +S
Sbjct: 164 ARGDTGDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVAATTLELLNAGVS 217
>gi|410949348|ref|XP_003981385.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Felis catus]
Length = 323
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDV 59
+ +RVL+ G TG LG+ + + + + Q+ LLD+ + D
Sbjct: 15 LPSRRVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDF 74
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ----------------QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAALI 116
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 117 GAFLIYISSDYVFDGTNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG 176
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P +V+DV + L + + D +
Sbjct: 177 --EVEKLDESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSI 233
Query: 240 QLLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTL 280
+ + G +++++ +MA G Q P + +D +KL +TL
Sbjct: 234 KGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETL 292
Query: 281 NIDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 293 GIGQRTPFRIGIKESL 308
>gi|83816254|ref|YP_445966.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855]
gi|83757648|gb|ABC45761.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855]
Length = 307
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 23/260 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M RVL+ G G LGQ L+ LS+ + YDV AT P+ + + DV
Sbjct: 1 MLFNRVLITGANGLLGQALVHRLSQ--NREYDVLATARDDA-PRFEDGSC--GYAPLDV- 54
Query: 61 LKSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D VA F P+VVVNCAA++ C+ A ++N + V L+
Sbjct: 55 ----TQPDDVAQIFEDFTPNVVVNCAAMTDVGRCDEHRSEAWAVN--ARAVKTLAKHCRT 108
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSII 177
L+ +STD V+ G + Y E+ PVN YG++K+A E + E +N+AI+R+ ++
Sbjct: 109 SGARLVQVSTDFVFNGKRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLL 168
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
YG T + +S + W+ LS+GE + D+ R P +V D+ I L +
Sbjct: 169 YG--TGRDLRRSNIVLWVADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLH------H 220
Query: 238 QMQLLLNVGGPDRVSRVQMA 257
+ + +V G D VS ++A
Sbjct: 221 EATGIYHVSGADMVSVYELA 240
>gi|426230056|ref|XP_004009098.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Ovis aries]
Length = 323
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 235 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAQRPRNAQLDCSRL-ETLG 293
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 294 IGQRTPFRIGIKESL 308
>gi|149726118|ref|XP_001503384.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Equus caballus]
Length = 323
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 22/255 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVLV G TG LG+ + + + + Q+ LLD+ + DV
Sbjct: 18 RRVLVTGATGLLGRAVYREFKQNNWHAFGCGYRRARPKFEQVNLLDSDAVRHIVHDV--- 74
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 -------------QPHVIVHCAAERRPDVVENQPDAASRLNVDASRN--LAKEAAAIGAF 119
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y+EED +P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 120 LIYISSDYVFDGTNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 177
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 178 VEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 236
Query: 243 LNVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 237 FHWSGNEQMTKYEMA 251
>gi|426230054|ref|XP_004009097.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Ovis aries]
Length = 334
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAQRPRNAQLDCSRL-ETLG 304
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 305 IGQRTPFRIGIKESL 319
>gi|385809297|ref|YP_005845693.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
gi|383801345|gb|AFH48425.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
Length = 294
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 28/258 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ GG+G+LGQ+L LSE + + T ++ + F +DL++
Sbjct: 2 KVLITGGSGFLGQYLNIFLSE----RHQIVTTFYNNS-------GNTNEFNSIHLDLRNF 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDS---AMSINVPSSLVNWLSSFTENKEN 121
S + F PDVVV+ AA+S + EN +++NV L + +
Sbjct: 51 SVLRNIFSNF-IPDVVVHTAAVSDTILNENISTKDVYGINVNVTEELAKLCNEYDAK--- 106
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI+ STD VY G + SF KE+ ++ PV++Y ++K+ E I + N+ ILR+++++G
Sbjct: 107 -LIYTSTDLVYAGYRGSFLKEDAKLIPVSLYAETKLMGEVKIKQTFDNYIILRTALLFG- 164
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
Q+I L + V+ F D+ R PV V + ++I + ++ +S
Sbjct: 165 --FGLNHAKCHFQYIYEQLRNNKPVKVFTDQFRSPVSVIEAARLISEMIDKNISCQ---- 218
Query: 241 LLLNVGGPDRVSRVQMAE 258
++N GGP+RVSR ++ E
Sbjct: 219 -IINFGGPERVSRYELTE 235
>gi|114051822|ref|NP_001039991.1| methionine adenosyltransferase 2 subunit beta [Bos taurus]
gi|122135265|sp|Q29RI9.1|MAT2B_BOVIN RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|88954131|gb|AAI14152.1| Methionine adenosyltransferase II, beta [Bos taurus]
gi|296485092|tpg|DAA27207.1| TPA: methionine adenosyltransferase 2 subunit beta [Bos taurus]
Length = 334
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDAASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAQRPRNAQLDCSRL-ETLG 304
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 305 IGQRTPFRIGIKESL 319
>gi|193214981|ref|YP_001996180.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
gi|193088458|gb|ACF13733.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
Length = 300
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 130/260 (50%), Gaps = 25/260 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV----FFDVD 60
+VL+ G +G LG ++L+ + K D+ T ++P +F +D
Sbjct: 3 KVLLTGASGLLGGNILK--HALANKTLDILPTRLGGDF------SVPEAFRGDKEILPLD 54
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++S + + ++ +P+V+++ AALS P CE ++A +IN + V +++ E+
Sbjct: 55 IRSQTWLWNIISQW-KPEVIIHTAALSEPGACEWQRETAEAINTRA--VKFIADLCEHFG 111
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG- 179
LI +STD V++G K Y E D P+N Y ++K AE+ + ++ ILR+S++ G
Sbjct: 112 IRLIFISTDLVFDGTKGDYLETDPPNPLNFYAETKCRAEEIVASSLHDYVILRTSLLLGA 171
Query: 180 -PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
PQ++ + + L G+ + FF DE R P+ + I L L + ++
Sbjct: 172 SPQSLRSLDERLKADG-----EAGKTMTFFTDEYRNPIAASVLADITLKLAS---GNNRS 223
Query: 239 MQLLLNVGGPDRVSRVQMAE 258
+ L + G D+VSR ++ E
Sbjct: 224 VTGLFHAAGKDKVSRFELGE 243
>gi|432330706|ref|YP_007248849.1| dTDP-4-dehydrorhamnose reductase [Methanoregula formicicum SMSP]
gi|432137415|gb|AGB02342.1| dTDP-4-dehydrorhamnose reductase [Methanoregula formicicum SMSP]
Length = 313
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G G+LG +L + + +P V T +TPL L+ D +P FF +L
Sbjct: 4 KILITGANGFLGANLTR---QFFNRPETSVILTSRNTPL-WLVKDTMP----FFPGNLLD 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K PD+V+N +L +CE +PD A I V S+ + L+ + + +
Sbjct: 56 ERFVEKLLVK-ENPDIVINTVSLVNVDLCEENPDLARQITVDSARI--LAKAAKKTGSRM 112
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII-YGPQT 182
+H+STDQV++G KSFY EED P+N YGK+K+ AE I + I+R++ + P
Sbjct: 113 VHISTDQVFDGEKSFYTEEDMPNPINQYGKTKLEAEHQILRYLQDAMIIRTNFFGWSPCG 172
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+P +W+ L + + ++ F + P+ V + I +L +S D +
Sbjct: 173 HAPTFG----EWVYQCLYERKVMQLFTNFYFSPIEVTSLAGTIDSL----ISTD--FAGI 222
Query: 243 LNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLV 277
L+V G +R S+ D GVQ + D + +V
Sbjct: 223 LHVCGSERCSK-----FDFGVQLAKETGFDPSSIV 252
>gi|302039637|ref|YP_003799959.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira
defluvii]
gi|300607701|emb|CBK44034.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira
defluvii]
Length = 290
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 24/188 (12%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-----LIHLSTDQV 131
P +V++CAALS CE DP A INV + TE L I LSTDQV
Sbjct: 56 PALVIHCAALSRTGACEQDPARARRINVEA---------TERLAGLARDIPFIFLSTDQV 106
Query: 132 YEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
++G K +Y E D + P+NVYG++K AE+ + E ++ +I+R ++ G SP
Sbjct: 107 FDGTKGWYVESDAVHPLNVYGQTKADAEQVVLENPAH-SIVRIALTAG---TSPTHDRSF 162
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
++ + +KG K+ F DE RCP+ +V+ + W L ++GG +R+
Sbjct: 163 VEDMLRAAAKGTKLTLFTDEYRCPIPAGPLVRAL------WEFAAHPRSGLYHLGGSERL 216
Query: 252 SRVQMAEV 259
SR ++ E+
Sbjct: 217 SRWEIGEL 224
>gi|404451293|ref|ZP_11016262.1| dTDP-4-dehydrorhamnose reductase [Indibacter alkaliphilus LW1]
gi|403763047|gb|EJZ24047.1| dTDP-4-dehydrorhamnose reductase [Indibacter alkaliphilus LW1]
Length = 305
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 18/255 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K+VL+ G G LGQ L++ L + K ++ AT + LP+ + ++ DV K
Sbjct: 2 KKVLITGSNGLLGQKLIKKLKD--NKAIELFATGRGESRLPESWQG--DYEWISLDVCDK 57
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + +A K PD V++ AA++ CE D ++ NV +++ N + + +N+ +L
Sbjct: 58 SAV-LELIAKKI--PDCVIHTAAMTQVDDCEADQNACWESNV-TAVRNLIEACEKNQVHL 113
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD +++G Y E PVN YG++K+AAE+ I +AI R+ ++YG
Sbjct: 114 -IHLSTDFIFDGKDGPYDESASANPVNYYGETKLAAEELIKASKCKWAIARTVLVYG--V 170
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S I W+ + L + +K+ D+ R P D+ + + L +K + +
Sbjct: 171 AADMSRSNIILWVKNSLEQRKKINVVTDQWRTPTLAEDLAEGCILLM------EKGSEGI 224
Query: 243 LNVGGPDRVSRVQMA 257
N+ G D ++ MA
Sbjct: 225 FNISGEDFLTPYDMA 239
>gi|434406333|ref|YP_007149218.1| dTDP-4-dehydrorhamnose reductase [Cylindrospermum stagnale PCC
7417]
gi|428260588|gb|AFZ26538.1| dTDP-4-dehydrorhamnose reductase [Cylindrospermum stagnale PCC
7417]
Length = 290
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 28/258 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K++L+ G +G+LG HL Q L++ E + Y +H+ P ++L V+L
Sbjct: 2 KKLLITGASGFLGWHLCQ-LAKEEWEVYGTYFSHYLEIPGVKML-----------KVNLT 49
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
++ + QP V++ AA S P C+ P + INV +S ++ +
Sbjct: 50 DFQELKSIFSQI-QPAAVIHTAAQSQPNYCQLHPQESYIINVTASCN--IAGLCADYGIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
STD V++G+ + Y+E D + PVN+YG+ KV AE+ + K A+ R +++G +T
Sbjct: 107 CAFTSTDLVFDGLNAPYRETDIVCPVNIYGEQKVQAEQGMLAKYPLTAVCRMPLMFGRET 166
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P KS IQ +L +G+++ F DE R PV VK ++LAL +++
Sbjct: 167 --PTAKSF-IQSFIQILKEGKELSLFIDEFRTPVSATTAVKGLLLAL--------EKVNG 215
Query: 242 LLNVGGPDRVSRVQMAEV 259
+++GG +R+SR ++
Sbjct: 216 CIHLGGKERISRYDFGQL 233
>gi|425440546|ref|ZP_18820845.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9717]
gi|389719001|emb|CCH97111.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9717]
Length = 292
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 34/259 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G+LG H+ Q + + Y + + H+ D +L
Sbjct: 2 KRLLITGVSGFLGWHIYQ-----KTRSYWASFGTY-----------FNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHAAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D + PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVFPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA 257
+Q ++++GG +RVSR Q
Sbjct: 213 VQGIIHLGGKERVSRYQFG 231
>gi|425464440|ref|ZP_18843753.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9809]
gi|389833579|emb|CCI21814.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9809]
Length = 292
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A++ F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 VNLTDLAAVRELFQQIKPDAVIHAAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSEHDPVSPVSVYGEQKVAAEKAILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNIPGEQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|431918117|gb|ELK17345.1| Methionine adenosyltransferase 2 subunit beta [Pteropus alecto]
Length = 346
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 139/313 (44%), Gaps = 43/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVL+ G TG LG+ + + + + Q+ LLD+ V +D
Sbjct: 41 RRVLITGATGLLGRAVYKEFRQNNWHAFGCGFRRARPKFEQVNLLDSDAVHNVIYDF--- 97
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 98 -------------QPHVIVHCAAERRPDVVENQPDAAAQLNVDAS--GNLAKEAAAIGAF 142
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 143 LIYISSDYVFDGTDPPYGEEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG--E 200
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 201 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGT 259
Query: 243 LNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNID 283
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 260 FHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNSQLDCSKL-ETLGIG 318
Query: 284 PVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 319 QRTPFRIGIKESL 331
>gi|186683883|ref|YP_001867079.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
gi|186466335|gb|ACC82136.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
Length = 290
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 47/310 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG HL Q L++ E +++ T+ S PL + L + F +LK
Sbjct: 2 KKLLITGASGFLGWHLCQ-LAKPE---WEIYGTYLSHPLEIPGIKTLKANLTNFQ-ELKR 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F+ V +P+ V++ AA S P C+ +P + +INV +S ++ +
Sbjct: 57 I--FNDV-----KPEAVIHTAAHSQPNFCQTNPKESHAINVIASCN--IAGLCADNSIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
STD V++G+ + Y+E D + PVN+YG+ K AE + E+ A+ R +++G T
Sbjct: 108 AFTSTDLVFDGLNAPYQEIDAVCPVNLYGEQKAIAEAGMLERYPLTAVCRMPLMFGAAT- 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
P KS IQ L +++ F DE R PV K ++LAL +++ +
Sbjct: 167 -PTAKSF-IQPFIQTLQAEKELNLFIDEFRTPVSGTTAAKGLLLAL--------EKVNGI 216
Query: 243 LNVGGPDRVSR--------------------VQMAEVDRGVQSPADISMDITKLVQTLNI 282
+++GG +R+SR + +V PAD+S+D +K L
Sbjct: 217 IHLGGKERLSRYDFGKILVEVFQLPTTKLKSCRQEDVKMAAPRPADVSLDSSKAF-ALGY 275
Query: 283 DPVTYKDGVK 292
P++ K+ ++
Sbjct: 276 QPLSLKEELQ 285
>gi|443650588|ref|ZP_21130491.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159026655|emb|CAO89003.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334661|gb|ELS49161.1| rmlD substrate binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 292
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D VA+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLVAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGRNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLRREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|146304023|ref|YP_001191339.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348]
gi|145702273|gb|ABP95415.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348]
Length = 293
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 29/253 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G G LG+ ++Q K Y+V +H + P + F +DL
Sbjct: 2 RVVVTGAGGLLGKRIVQAF-----KDYEVVGVYHRSQ---------PETSPFLVLDL--- 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + ++ PDV+++ AAL+ CE +PD A +NV + + ++ L+
Sbjct: 45 SSLNLRPIEELSPDVIIHAAALTDVDKCEREPDLARLLNV--DVTREIVKVSKRTNAFLV 102
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+EEDE PVNVYG +K+ EK + + S ++R+S YG S
Sbjct: 103 YISTDYVFDGTRGNYREEDETNPVNVYGLTKLEGEKLVRDVDS--LVVRTSTPYGSNPAS 160
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K W+ L GE+V D+ P + ++ D++++ +L+
Sbjct: 161 --GKDNFALWLLKKLKAGERVNALVDQVTSPTLNTNFSLMLREAV------DRRIKGVLH 212
Query: 245 VGGPDRVSRVQMA 257
+ G +VSR + +
Sbjct: 213 LAGRSQVSRYEFS 225
>gi|427728210|ref|YP_007074447.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
gi|427364129|gb|AFY46850.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
Length = 294
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 51/309 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
+++L+ G +G+LG HL Q I + + V T+ H +P + L ++L
Sbjct: 2 RKLLITGASGFLGWHLCQ----IAKQNWQVYGTYCSHDLEIPGINL---------IKLNL 48
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + + QPD V++ AA S P C+ P+ + +NV +S ++ + +
Sbjct: 49 TDFAELKQIFQEI-QPDAVIHTAARSQPNFCQTHPEESHLVNVIASCN--IAGLCADYQI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
STD V++G+ + YKE D + PVN+YG+ KV AE + E+ A+ R +++G
Sbjct: 106 PCAFTSTDLVFDGLNAPYKETDAVCPVNIYGEQKVLAEIGMLERYPMTAVCRMPLMFGNA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P S IQ +L+ G+++ F DE R P + ++LAL +++
Sbjct: 166 T--PTATSF-IQPFIEILTAGKELNLFIDEFRTPASADTAAQGLLLAL--------EKVH 214
Query: 241 LLLNVGGPDRVSR--------------------VQMAEVDRGVQSPADISMDITKLVQTL 280
++++GG +R+SR + +V PAD+S+D ++ L
Sbjct: 215 GIIHLGGKERISRYDFGRLLVEVFQLPETGLKGCRQQDVKMAAPRPADVSLDSSQAF-IL 273
Query: 281 NIDPVTYKD 289
P++ K+
Sbjct: 274 GYKPLSIKE 282
>gi|448639551|ref|ZP_21676798.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
gi|445762672|gb|EMA13891.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
Length = 314
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 32/233 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
++LVVG G LG ++++ + + ++V T+HST PL Q
Sbjct: 20 QLLVVGANGLLGSNVVRAGQQ---RGWNVRGTYHSTRPEFDIPLTQF------------- 63
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFT 116
DL+ FD++ L PDVVVNCAA++ CE +P+ A +N P L ++
Sbjct: 64 -DLREYDSFDSI-LTEHDPDVVVNCAAMTDVDECETNPEQAHVLNGDAPGKL----ATHC 117
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+H+STD V++G + Y E + PV VYG+SK+A E+ + E+ ++ + R S
Sbjct: 118 NVNGIEFVHVSTDYVFDGTRREPYSESADTNPVQVYGESKLAGEQEVIEETTDALVARLS 177
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
++G S P W+ S L GE + F D+ P K +L L
Sbjct: 178 FVWGIHRSSNDLTGFPA-WVRSQLLSGENIPLFTDQWVTPTRAGQAAKTLLDL 229
>gi|223998907|ref|XP_002289126.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974334|gb|EED92663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 331
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 139/323 (43%), Gaps = 91/323 (28%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEG-----------------------KPYDVAATHHST 40
K++L+ G +GY+GQH++ +S I G + Y+V ++S
Sbjct: 8 KKILITGSSGYVGQHMISHIS-IHGLVVPAPSSSDVSASPLSPSASVNQRYEVYCAYNS- 65
Query: 41 PLPQL------LLDALPHSFVFFDVDLKSGSGFDAVALKF---------GQPDVVVNCAA 85
LP L D H V ++S S D + G DV+++ AA
Sbjct: 66 -LPNFEDDLSNLFDGTAHKLHPSIVKMQSVSNIDFCNPNYIHKIQQACGGTVDVIIHLAA 124
Query: 86 LSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEI 145
LS P CE+ + A IN P L++ + ++++STDQVYEG K FY E DE
Sbjct: 125 LSSPFYCESHAEEAWKINCPVELLSLKAP--------IMYMSTDQVYEGTKQFYGENDET 176
Query: 146 APVNVYGKSKVAAEK------------------------FIYEKCSN-------FAILRS 174
PVN+YG++K+A E+ F+ SN ILRS
Sbjct: 177 VPVNMYGRTKLAFERILVGGLGSSTLLTAKELGLCTLPEFLTNVISNNLRPHNKSVILRS 236
Query: 175 SIIYGPQTISP--VPKSLP--IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
S+I G T P K P +Q+I+ L ++F +E R V++ DV+ I
Sbjct: 237 SLILGKPTPFPNGCRKGFPSFLQFIEDRLKNQISTDYFVNEYRSVVHLEDVIGSIRHFVL 296
Query: 231 RWLS------EDKQMQLLLNVGG 247
+ LS D+ +Q + N+GG
Sbjct: 297 KALSPNDDTAADEGVQ-VFNLGG 318
>gi|329665893|pdb|2YDY|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase
2, Beta Subunit In Orthorhombic Crystal Form
Length = 315
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 3 RRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVNLLD 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 49 SNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVGAFL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG +
Sbjct: 106 IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG--EV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + D ++
Sbjct: 164 EKLEESAVTVXFDKVQFSNKSANXDHWQQRFPTHVKDVATVCRQLAEK-RXLDPSIKGTF 222
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G ++ ++ + A G Q P + +D +KL +TL I
Sbjct: 223 HWSGNEQXTKYEXACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLGIGQ 281
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 282 RTPFRIGIKESL 293
>gi|444709551|gb|ELW50560.1| Hyaluronan mediated motility receptor [Tupaia chinensis]
Length = 981
Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 673 IPNRRVLVTGATGLLGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 718
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 719 LLDSNAVHEIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAATIG 775
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 776 AFLIYISSDYVFDGTNPPYREEDIPTPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYG- 834
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 835 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 892
Query: 241 LLLNVGGPDRVSRVQMA-------------------EVDRGVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D +KL +TL
Sbjct: 893 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL-ETLG 951
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 952 IGQRTPFRIGIKESL 966
>gi|425448951|ref|ZP_18828795.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
7941]
gi|389766615|emb|CCI07787.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
7941]
Length = 292
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 53/309 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +I+G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLIFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V N L +++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAV-------NGLLFALEKV 213
Query: 240 QLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQT 279
Q ++++GG +RVSR Q +V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFKLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAFS 272
Query: 280 LNIDPVTYK 288
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|333986784|ref|YP_004519391.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. SWAN-1]
gi|333824928|gb|AEG17590.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. SWAN-1]
Length = 289
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 41/308 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+ + GG+G LG I G Y++ THH P + V FD+ ++
Sbjct: 2 KRLFITGGSGLLGSKF----KYIAGSKYEIVTTHHKNP---------GENSVLFDITDEN 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+L PD V++ AAL+ CE+ P A ++N + + ++ E + L
Sbjct: 49 DVMNKITSL---NPDAVIHAAALTNVDYCEDHPKEAWNVNAKGT--DNIAKACEKTGSKL 103
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGPQT 182
++STD V++G + Y EED+ P+ Y +K+ E+FI + N+AI R S++YG T
Sbjct: 104 TYVSTDFVFDGERGMYSEEDKTNPLGYYASTKLEGEEFIRQYDDLNYAIARVSVLYGWHT 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + W+ L G ++ D+ P + + ++ + +K +
Sbjct: 164 -----RMNFVTWVIDELKNGNEINIVTDQYNSPTLADNAAEAMIKIF------EKDKTGI 212
Query: 243 LNVGGPDRVSRVQMA-------EVDRGVQSPADISMDITKLVQ----TLNIDPVTYKDGV 291
+ G +R++R A ++D + +P + + K + +LN++ V G+
Sbjct: 213 YHTVGDERINRFDFARNIAEVFDLDSSLINPTKSTNFVQKAKRPKDSSLNVEKVQRDLGI 272
Query: 292 KLTLAAEA 299
K+ E
Sbjct: 273 KMLNTTEG 280
>gi|449267237|gb|EMC78203.1| Methionine adenosyltransferase 2 subunit beta, partial [Columba
livia]
Length = 313
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLK 62
+RVLV G TG LG+ + + +E Q+ LLD++ + D
Sbjct: 8 RRVLVTGATGLLGRAVFKEFNENNWNAVGCGYRRAQPRFEQINLLDSIAVHDIIHDF--- 64
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
QP V+V+CAA P V E+ PD+A +NV +S L+
Sbjct: 65 -------------QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGVGAF 109
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI++STD V++G YKE D P+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 110 LIYISTDYVFDGTSPPYKESDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPILYG--E 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + +S D V + H + R P V+DV + L + + D ++
Sbjct: 168 VERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAAVCRQLAEKRML-DPSVKGT 226
Query: 243 LNVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 227 FHWSGNEQMTKYEMA 241
>gi|19527234|ref|NP_598778.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Mus
musculus]
gi|81880218|sp|Q99LB6.1|MAT2B_MOUSE RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|13097444|gb|AAH03457.1| Methionine adenosyltransferase II, beta [Mus musculus]
gi|148700381|gb|EDL32328.1| methionine adenosyltransferase II, beta, isoform CRA_a [Mus
musculus]
Length = 334
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPKNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRTGIKESL 319
>gi|344265235|ref|XP_003404690.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Loxodonta africana]
Length = 334
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 47/315 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVD 60
+RVL+ G TG LG+ + + Q+ L DA+ H+ F
Sbjct: 29 RRVLITGATGLLGRAVYKEFQHNNWHAVGCGFRRARPKFEQVNLLDPDAVHHTLHDF--- 85
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 86 ---------------QPHVIVHCAAERRPDVVENQPDAASQLNVEAS--GNLAKEAAAVG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENHLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -DVEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSRL-ETLG 304
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 305 IGQRTPFRIGIKESL 319
>gi|327260693|ref|XP_003215168.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Anolis carolinensis]
Length = 334
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + ++ +S P +F V+L
Sbjct: 29 RRVLVTGATGLLGRAVYK---EFKENRWNAVGCGYSRARP-----------LFEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+++CAA P V ++ PD+A +NV +S ++ L
Sbjct: 75 ATAVHNLIQGF-QPHVIIHCAAERRPDVVDSQPDAASRLNVVAS--GNIAKEAAQVRAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G YKE D P+N+YG++K+ EK + + + A+LR I+YG +
Sbjct: 132 VYISTDYVFDGTDPPYKENDVPNPLNLYGRTKLEGEKAVLQNNKDAAVLRIPILYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L + + ++ ++
Sbjct: 190 ERLDESAVTVIFDKVQFNNKSANMDHWQQRFPTYVKDVASVCRQLAEKRM-QNPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEV 259
+ G +++++ +MA
Sbjct: 249 HWSGNEQLTKFEMARA 264
>gi|395505024|ref|XP_003756846.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
[Sarcophilus harrisii]
Length = 323
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 18 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGYSRARPR-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ E+ + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDTPNPLNLYGKTKLEGERAVLENNVGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 179 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 237
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 238 HWSGNEQMTKYEMA 251
>gi|425437250|ref|ZP_18817673.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9432]
gi|389677822|emb|CCH93286.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9432]
Length = 292
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|344265237|ref|XP_003404691.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Loxodonta africana]
Length = 323
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 138/315 (43%), Gaps = 47/315 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFDVD 60
+RVL+ G TG LG+ + + Q+ L DA+ H+ F
Sbjct: 18 RRVLITGATGLLGRAVYKEFQHNNWHAVGCGFRRARPKFEQVNLLDPDAVHHTLHDF--- 74
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 75 ---------------QPHVIVHCAAERRPDVVENQPDAASQLNVEAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKAVLENHLGAAVLRIPVLYG- 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 177 -DVEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 234
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G Q P + +D ++L +TL
Sbjct: 235 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSRL-ETLG 293
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 294 IGQRTPFRIGIKESL 308
>gi|313482787|ref|NP_001186203.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Mus
musculus]
gi|26344854|dbj|BAC36076.1| unnamed protein product [Mus musculus]
gi|74187532|dbj|BAE36716.1| unnamed protein product [Mus musculus]
gi|148700382|gb|EDL32329.1| methionine adenosyltransferase II, beta, isoform CRA_b [Mus
musculus]
Length = 323
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPKNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRTGIKESL 308
>gi|427719470|ref|YP_007067464.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 7507]
gi|427351906|gb|AFY34630.1| dTDP-4-dehydrorhamnose reductase [Calothrix sp. PCC 7507]
Length = 294
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 26/257 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG H+ Q I + ++V T+ S + + L + F +LK
Sbjct: 2 QKLLITGASGFLGWHICQ----ITKQEWEVYGTYLSHSIEIAGMKTLKANLTDFQ-ELKR 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ PD V++ AA S P C+ P + +INV +S ++ +
Sbjct: 57 -------IFRDINPDAVIHTAAQSQPNFCQTHPQESQAINVTASCD--IAGLCADYSIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ + Y+E D + P+N+YG+ KV AE + E+ A+ R +++G T
Sbjct: 108 VFTSTDLVFDGLNAPYRETDPVCPINLYGEQKVMAEVGMLERYPQTAVCRMPLMFGMAT- 166
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLL 242
P S IQ L G+++ F DE R PV + I+LAL +++
Sbjct: 167 -PTASSF-IQPFIQTLETGKELNLFIDEFRTPVSATTASQGILLAL--------EKVNGY 216
Query: 243 LNVGGPDRVSRVQMAEV 259
+++GG +R+SR ++
Sbjct: 217 IHLGGKERISRYHFGQL 233
>gi|440755743|ref|ZP_20934945.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
gi|440175949|gb|ELP55318.1| rmlD substrate binding domain protein [Microcystis aeruginosa
TAIHU98]
Length = 292
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKEVFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPREQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSIK 281
>gi|332709592|ref|ZP_08429552.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
gi|332351625|gb|EGJ31205.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
Length = 292
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 34/264 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+K++LV G +G+LG +L Q + + +D+ T+ S + +P DL+
Sbjct: 2 RKKLLVTGASGFLGWNLCQ----LAKEQWDIYGTYFSQTI------DIP-GITLVKADLR 50
Query: 63 SGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
F + F QP V++ AA S P C+ + + SINV +S+ ++ + + +
Sbjct: 51 E---FQEIKHLFAEIQPAGVIHTAAQSKPNFCQTHREESYSINVTASIN--IARLSADYD 105
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ STD V++G+ Y E D ++P++ YG+ KV AE+ + AI R +++G
Sbjct: 106 IPCVFTSTDLVFDGLNPPYLETDPVSPISYYGEQKVMAEEGMRSHYPKVAICRMPLMFG- 164
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
I P S IQ ++ +G + F DE R PV K ++LAL +++
Sbjct: 165 --IVPPTASSFIQPFLKIIREGRPLSLFTDEIRTPVSGTTAAKGLLLAL--------EKV 214
Query: 240 QLLLNVGGPDRVSRVQ----MAEV 259
Q L+N+GG +R+SR MAEV
Sbjct: 215 QGLVNLGGKERISRYDFGCLMAEV 238
>gi|425469816|ref|ZP_18848721.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9701]
gi|389880298|emb|CCI38928.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9701]
Length = 292
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 148/309 (47%), Gaps = 53/309 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLVQT 279
Q ++++GG +RVSR Q ++V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFNLPKEQIKPCLQSDVPMSAPRPQDVSLD-SSLAFS 272
Query: 280 LNIDPVTYK 288
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|84489910|ref|YP_448142.1| dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM
3091]
gi|84373229|gb|ABC57499.1| predicted dTDP-4-dehydrorhamnose reductase [Methanosphaera
stadtmanae DSM 3091]
Length = 286
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ + GG+G LG+ L + I ++ +H+S P + D+
Sbjct: 2 KFFITGGSGLLGERL----ATIASNDDEIVLSHNSNPTKNTI-----------KCDITDK 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + V K +PD +V+CAA++ +CE++ D A IN S ++ EN +I
Sbjct: 47 NEVEKVINK-NKPDTIVHCAAMTDVDLCEDEIDIAYRIN--SDGTRNMAQAAENIGAKII 103
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K +Y E+DE+ P+ +Y KSK E + + +N+AI R S++YG
Sbjct: 104 YVSTDFVFDGDKGYYSEDDEVNPLGIYAKSKYDGEVQLKKYSTNWAIARVSVLYGWH--- 160
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K+ W+ + L + D+ P Y + + I + +DK + +
Sbjct: 161 --KKANFTTWVINQLRSNNSINIVTDQINSPTYADNAGEAIFEIA----KQDKNG--IYH 212
Query: 245 VGGPDRVSRVQMAE 258
G DR++R +
Sbjct: 213 TAGNDRINRFDFTQ 226
>gi|395505022|ref|XP_003756845.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
[Sarcophilus harrisii]
Length = 334
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 29 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGYSRARPR-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ E+ + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDTPNPLNLYGKTKLEGERAVLENNVGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 190 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 248
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 249 HWSGNEQMTKYEMA 262
>gi|76879702|dbj|BAE45720.1| putative protein product of Nbla02999 [Homo sapiens]
Length = 259
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+LR I+YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+ + +S D V + H + R P +V+DV + L + +
Sbjct: 188 -EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239
>gi|425446654|ref|ZP_18826656.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9443]
gi|389733044|emb|CCI03140.1| Genome sequencing data, contig C275 [Microcystis aeruginosa PCC
9443]
Length = 292
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 55/310 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L+ G +G+LG H+ Q K A+ + L H+ D +L
Sbjct: 2 KTLLITGVSGFLGWHIYQ-------KTRSSWASFGTY---------LNHNVNSNDPNLIK 45
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D A+K F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 46 INLTDLAAVKELFQQIKPDAVIHGAAQSKPNLCQEFPQASDAINLTASL--EIARLCSQY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 104 QIPLVFTSTDLVFDGKNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQ 238
+ SP S +Q L +G+++ F DE R V V V ++LAL ++
Sbjct: 164 --SPSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EK 212
Query: 239 MQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
+Q ++++GG +RVSR Q +V P D+S+D + L
Sbjct: 213 VQGIIHLGGKERVSRYQFGLLMAAVFNLPRQQIKPCLQCDVPMSAPRPQDVSLD-SSLAF 271
Query: 279 TLNIDPVTYK 288
+L P++ K
Sbjct: 272 SLGYQPLSNK 281
>gi|126290739|ref|XP_001370026.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 2 [Monodelphis domestica]
Length = 323
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 18 RRALITGATGLLGRAVYK---EFEKNNWHAVGCGYSRARPR-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 64 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 237
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 238 HWSGNEQMTKYEMA 251
>gi|126290742|ref|XP_001369996.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
isoform 1 [Monodelphis domestica]
Length = 334
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + +S P+ F V+L
Sbjct: 29 RRALITGATGLLGRAVYK---EFEKNNWHAVGCGYSRARPR-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 75 THAVHDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAGIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPTIKGTF 248
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 249 HWSGNEQMTKYEMA 262
>gi|430747485|ref|YP_007206614.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
gi|430019205|gb|AGA30919.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
Length = 294
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 47/294 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV++ G +G LG LL L E + + + T T P VDL +
Sbjct: 2 RVVLTGASGQLGSTLLFRLVESGHEVWAWSGTEEGTRGP----------ISLRTVDL-TD 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENL 122
G A L P+VV++ ALS V DP ++N ++ L NW ++
Sbjct: 51 EGAVAHGLAEADPEVVIHAGALSSAEVVRRDPVRGRAVNTEATARLANWCATHGRR---- 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L++ STD V++G K++ +EED+ P+ YG++K AE + + R S++YGP
Sbjct: 107 LVYTSTDMVFDGSKAWSREEDQAEPILAYGRTKHDAEPAVLAVPRGL-VARMSLMYGP-- 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
S + + + L G FF DE R P+ + I++ L + +++ L
Sbjct: 164 -SRSGRESFYERTIAGLRGGVSQTFFEDEFRTPLDLESAALILVRLA------ESEVRGL 216
Query: 243 LNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKL 276
L+V GP+RVSR + A++ P D+S+D +KL
Sbjct: 217 LHVAGPERVSRYDLVRRQAMALGVDPALVLANRQADLTFAEPRPVDVSLDTSKL 270
>gi|428305359|ref|YP_007142184.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
gi|428246894|gb|AFZ12674.1| dTDP-4-dehydrorhamnose reductase [Crinalium epipsammum PCC 9333]
Length = 288
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 33/228 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R+L+VG G LGQ L Q L PY +V A T +DL
Sbjct: 3 RILIVGSAGQLGQELQQTLI-----PYGEVVAVDRKT------------------LDLSQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + QP +V+N AA + E +P++A IN + + L+ E + +L
Sbjct: 40 PDQIRELVQQV-QPQIVINAAAYTAVDQAEKEPETARMINAIAPTI--LAQEVEKLKAIL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K+ Y EED P+++YG+SK+A E+ I E C ++ ILR++ +YG
Sbjct: 97 IHVSTDYVFDGSKNHPYTEEDITNPLSIYGQSKLAGEQGIQENCQSYLILRTAWVYGAYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
S K++ + S+ E+V D+ P + +D+ I +T+
Sbjct: 157 KSNFVKTML-----RLGSEREEVRVVTDQIGTPTWAKDIADAIAQVTS 199
>gi|436834739|ref|YP_007319955.1| dTDP-4-dehydrorhamnose reductase [Fibrella aestuarina BUZ 2]
gi|384066152|emb|CCG99362.1| dTDP-4-dehydrorhamnose reductase [Fibrella aestuarina BUZ 2]
Length = 298
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 35/279 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHS--FVFFDVD 60
K++L+ G G LGQ L+ L+ +P ++ AT + LPH+ + + +D
Sbjct: 2 KKILITGANGLLGQKLVALLAN---QPDVELTATARGA-------NRLPHTDGYTYLAMD 51
Query: 61 LKSGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ + D V GQ PD V++ AA++ CE D D+ + NV + V ++
Sbjct: 52 I---TNRDEVLSVIGQVRPDAVIHGAAMTDVDKCELDKDACWAQNVTA--VEYIVEACRA 106
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++Y
Sbjct: 107 TNAFLCHVSTDFIFDGAAGPYTEEAEGNPISFYGWSKYAAEKVVKHSGLRWAIARTVLVY 166
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G + +S I W+ L G+ + D+ R P D+ AL R ++
Sbjct: 167 G--IAHDMSRSNIILWVKKSLEDGKTINVVTDQFRSPTLAEDLAA-GCALIAR-----QE 218
Query: 239 MQLLLNVGGPDRVSRVQMA-------EVDRGVQSPADIS 270
+ + N+ G D ++ +MA +D+ + PAD S
Sbjct: 219 AEGIFNISGSDVLTPYEMAIQTADYFSLDKSLIKPADGS 257
>gi|172035069|ref|YP_001801570.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC
51142]
gi|354551923|ref|ZP_08971231.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
gi|171696523|gb|ACB49504.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC
51142]
gi|353555245|gb|EHC24633.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
Length = 292
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 33/263 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G+LG ++ Q E + V T++ ++ +D + F VD+ +
Sbjct: 2 KKLLITGASGFLGYNVCQYAQE----NWQVYGTYYHN---RINIDRIN----CFKVDITN 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PD V++ AA S P C+N+P+ A INV +SL L+ +
Sbjct: 51 IQELHTVFNEI-KPDGVIHLAAASKPNYCQNNPEDAYQINVTASLN--LAKLCADGNIPC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ S Y+E D ++P++ YG+ KV AE+ + I R +++G
Sbjct: 108 VFTSTDLVFDGLNSPYQESDPVSPISYYGEQKVQAEQEMLAIYPKTVICRMPLMFG---- 163
Query: 184 SPVPKSLP---IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+P S IQ+ + +G+ + F DE R PV K +L L+ +K
Sbjct: 164 --IPSSHAASFIQFFLTTFREGKPLSLFTDEYRTPVSGLTAAKGLL------LALEKGEG 215
Query: 241 LLLNVGGPDRVSRVQ----MAEV 259
++++GG +R+SR Q MAEV
Sbjct: 216 EIIHLGGKERISRYQFGHLMAEV 238
>gi|255533298|ref|YP_003093670.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366]
gi|255346282|gb|ACU05608.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366]
Length = 303
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 38/310 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VLV G G LGQ + + L + + +A P + + + ++D+
Sbjct: 2 RTVLVTGSNGLLGQKITERLL-VTNQFGLIATAKGGNRFP------VTEGYTYAEMDILD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AV K+ QPD +++ AA++ CE + + A +NV + V L S E L
Sbjct: 55 PENVKAVVEKY-QPDAIIHTAAMTNVDTCEAEKELAYQLNVEA--VKTLVSLCELHNIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+HLSTD +++G Y E P++ YG +K+ AE+ I +AILR+ I+YG +
Sbjct: 112 VHLSTDFIFDGAHGPYDELAAPNPLSYYGITKLEAEEVIKSSTCRWAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + ++ + W + L KG + +D+ R P D+ L L+ +K + +
Sbjct: 170 SDMSRTNIVLWAKTALEKGSPINVVNDQWRMPTLAEDLADCCL------LAVEKDARGVY 223
Query: 244 NVGGPDR--------------------VSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
N G D ++ + +++ + P + K + L
Sbjct: 224 NASGKDMMRISELVARVADYWGLNKSLITEISSESLNQAAKRPVKTGFILDKTINDLGYS 283
Query: 284 PVTYKDGVKL 293
P ++++G+ +
Sbjct: 284 PHSFEEGLAI 293
>gi|112983992|ref|NP_001037747.1| methionine adenosyltransferase 2 subunit beta [Rattus norvegicus]
gi|81883481|sp|Q5U2R0.1|MAT2B_RAT RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|55249791|gb|AAH85899.1| Similar to methionine adenosyltransferase II, beta [Rattus
norvegicus]
gi|149052293|gb|EDM04110.1| rCG33311, isoform CRA_b [Rattus norvegicus]
Length = 334
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHAVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 132 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPKNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRIGIKESL 319
>gi|390354165|ref|XP_799081.3| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+VL+ G +G LG+ +L+ + +DV ++ L VDL
Sbjct: 2 KKVLITGASGLLGREVLKTF---QASGWDVLGLAYTRAKDNL-----------KKVDLTD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +K QPDVV++ AA V E DP + +NV ++ V ++S E LL
Sbjct: 48 TEPLQDV-IKEYQPDVVIHAAAERRTDVVERDPQTVQKLNVGATAV--IASVCEKLGILL 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++ST+ V++G K YK D P+N YG+SK E E ILR ++YG +I
Sbjct: 105 VYISTNYVFDGTKPPYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYG--SI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + + KV+ D + R P +VRDV ++L L R ++ + +
Sbjct: 163 ERLNESAATYLLHQIQDDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGER-VSGI 221
Query: 243 LNVGGPDRVSRVQMAEV-------------------DRGVQSPADISMDITKLV-QTLNI 282
L+ ++++R QMA + G P + SMDI+ + Q + +
Sbjct: 222 LHWNTSEQLTRYQMALIITDVFNLPQDHLIANPNPPSAGTPRPHNASMDISAVTDQGVKV 281
Query: 283 DPVTYKDGVKLTLA 296
+++ G++ +LA
Sbjct: 282 SDTSFRKGIEESLA 295
>gi|375012065|ref|YP_004989053.1| dTDP-4-dehydrorhamnose reductase [Owenweeksia hongkongensis DSM
17368]
gi|359347989|gb|AEV32408.1| dTDP-4-dehydrorhamnose reductase [Owenweeksia hongkongensis DSM
17368]
Length = 298
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 18/254 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L G G LGQ L+ LS+ + + +A L + + +D+
Sbjct: 2 KILTTGSNGLLGQKLVHKLSK-DSEVELIATARGENRLSN------KEGYKYHSLDITDE 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K+ +PD V++ AA++ CE D + +NV ++ ++ + L+
Sbjct: 55 KAVAETIVKY-KPDSVIHTAAMTNVDACEADKEGCDKLNVDAT--QYIVDACKANNAHLV 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
HLSTD +++G Y EE + P++ YG+SK+ AE+ + E N AILR+ ++YG
Sbjct: 112 HLSTDFIFDGKDGPYDEEAKPNPISYYGESKLKAEEIVLESGQNAAILRTVLVYG--IAE 169
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S W L KG+++ D+ R P D+ + L+ ++ + + N
Sbjct: 170 DMSRSNIALWAKGALQKGQQINVVDDQFRSPTLAEDLADGCI------LAAKQKAKGIYN 223
Query: 245 VGGPDRVSRVQMAE 258
+ G D++S +++ +
Sbjct: 224 ISGKDQLSVLEIVQ 237
>gi|416375764|ref|ZP_11683395.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
gi|357266478|gb|EHJ15099.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
Length = 249
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 43/268 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG +L Q E + V ++++ L D+ +FV DV
Sbjct: 2 KKLLVTGASGFLGYNLCQYAQE----NWQVYGSYYNHKL-----DSKNINFVKVDV---- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ D + F Q PD V++ AA S P C+N+P+ + INV +S ++ +
Sbjct: 49 -TNIDELQTIFKQIKPDAVIHLAAASKPNYCQNNPEDSYKINVTAS--GNIAKLCADVNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK---FIYEKCSNFAILRSSIIY 178
+ STD V++G+ YKE D ++P++ YG+ KV AE+ IY K I R +++
Sbjct: 106 PCVFTSTDLVFDGLNLPYKESDPVSPISYYGEQKVKAEQEMLIIYPKT---VICRMPLMF 162
Query: 179 GPQTISPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G +P +ID L +G+K+ F DE R PV K +L L+
Sbjct: 163 G------IPSPYAASFIDFFLKTFREGKKLSLFTDEYRTPVSGLTAAKGLL------LAL 210
Query: 236 DKQMQLLLNVGGPDRVSRVQ----MAEV 259
+K ++++GG RVSR + MAEV
Sbjct: 211 EKGEGEIIHLGGRKRVSRYEFGNLMAEV 238
>gi|149052294|gb|EDM04111.1| rCG33311, isoform CRA_c [Rattus norvegicus]
Length = 323
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLITGATGLLGRAVYK---EFQQSNWHAVGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED +P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPKNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|345329789|ref|XP_001513330.2| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Ornithorhynchus anatinus]
Length = 325
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E E + S P+ F V+L
Sbjct: 20 RRALITGATGLLGRAVYK---EFEQNNWHAVGCGFSRARPK-----------FEQVNLLD 65
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + F QP V+V+CAA P V EN PD+A +NV +S L+ L
Sbjct: 66 NNAVRDIIQDF-QPHVIVHCAAERRPDVVENQPDAASQLNVAAS--GNLAKEAAGIGAFL 122
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 123 IYISSDYVFDGTNPPYREDDVPNPLNLYGKTKLEGEKAVLENNVGAAVLRIPVLYG--EV 180
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 181 EKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRML-DPSIKGTY 239
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 240 HWSGNEQMTKYEMA 253
>gi|363739065|ref|XP_414497.3| PREDICTED: methionine adenosyltransferase 2 subunit beta [Gallus
gallus]
Length = 321
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + +E ++ + P+ F V+L +
Sbjct: 16 RRVLITGATGLLGRAVFKEFNE---NNWNAVGCGYRRAQPK-----------FEQVNLLN 61
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 62 SVAVHDIIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGIGAFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 119 IYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 177 ERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKRML-DPSIKGTF 235
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 236 HWSGNEQMTKYEMA 249
>gi|330508400|ref|YP_004384828.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP6]
gi|328929208|gb|AEB69010.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP6]
Length = 290
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 52/312 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+ + GG+G G L + ++ G+ H+ P + + DL
Sbjct: 2 RIFITGGSGLAGSKLAE-MALARGEQVYSGYAHNQPPYGKEV-----------KFDLLDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+G + +PDV+V+ AAL+ CE D A INV + ++ + L+
Sbjct: 50 NGIRDTIERM-RPDVIVHSAALTDVDRCERKKDLAYRINVEGTRT--IAEAARKAGSYLV 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+EE+E PV+ YG SK+ E+F ++ I R+ +IYG +
Sbjct: 107 YISTDYVFDGQRGLYREEEETNPVSYYGLSKLLGEQFCLDQG---CIARTCVIYGSR--- 160
Query: 185 PVPKSLPIQ---WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
P S + W+ + L G++V D+ P ++ ++L NR LS
Sbjct: 161 --PASGKVNFALWLLNALKSGKEVRVVTDQFITPTLNSNLAAMVLEAANRNLSG------ 212
Query: 242 LLNVGGPDRVSRV--------------------QMAEVDRGVQSPADISMDITKLVQTLN 281
+ ++ G RVSR QM+++ + P D S+D +K +TL
Sbjct: 213 IYHLSGAARVSRYDFACELARAFDIDRRLIIPSQMSDIGWLARRPMDSSLDTSKASRTLK 272
Query: 282 IDPVTYKDGVKL 293
P+ + +++
Sbjct: 273 NRPLNLYESLQV 284
>gi|166366805|ref|YP_001659078.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa NIES-843]
gi|166089178|dbj|BAG03886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa NIES-843]
Length = 292
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 32/258 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ +IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSENDTVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQMA 257
Q ++++GG +RVSR Q
Sbjct: 214 QGIIHLGGKERVSRYQFG 231
>gi|374636183|ref|ZP_09707763.1| dTDP-4-dehydrorhamnose reductase [Methanotorris formicicus Mc-S-70]
gi|373559866|gb|EHP86147.1| dTDP-4-dehydrorhamnose reductase [Methanotorris formicicus Mc-S-70]
Length = 296
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + DSA IN + ++ + + L H+STD V++G
Sbjct: 63 NPDFVVNTAAMTNVDLCETERDSAYKINALGA--KYIGEACKEIDCYLCHISTDYVFDGE 120
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y EEDEI P+N YG +K EK + E + +I+R S+ P ISPV + W
Sbjct: 121 KGDYVEEDEINPINYYGYTKAEGEKLLNELDYDSMSIVRISV---PYCISPVKVNF-FMW 176
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L E + D+ P YV + + ++ + +K + LL+ GG ++VSR
Sbjct: 177 VLERLKNNEAINAVIDQWNTPTYVNEFIGGVVKIY------EKDIGGLLHFGGGEKVSRY 230
Query: 255 QMA 257
+ A
Sbjct: 231 EFA 233
>gi|354477489|ref|XP_003500952.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Cricetulus griseus]
Length = 323
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQQSNWHTIGCGFRRARPK-----------FEQVNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ + L
Sbjct: 64 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGAS--GNLAKEAASIGAFL 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 121 IYISSDYVFDGTDPPYTEEDIPNPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYG--EV 178
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 179 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 237
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 238 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPRNAQLDCSKL-ETLGIGQ 296
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 297 RTPFRIGIKESL 308
>gi|422302212|ref|ZP_16389575.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9806]
gi|389788681|emb|CCI15591.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis
aeruginosa PCC 9806]
Length = 292
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 53/309 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ ++L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KINL- 48
Query: 63 SGSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV F Q PD V++ AA S P +C+ P ++ IN+ +SL ++ +
Sbjct: 49 --TDLAAVRELFQQIKPDAVIHGAAQSKPNLCQEFPQASEVINLTASL--EIARLCSQYQ 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+ STD V++G + Y E D ++PV+VYG+ KVAAEK I AI R +++G
Sbjct: 105 IPLVFTSTDLVFDGKNAPYSESDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG- 163
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQM 239
+ SP S +Q L +G+++ F DE R V V V ++LAL +++
Sbjct: 164 -SPSPTANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVNGLLLAL--------EKV 213
Query: 240 QLLLNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLVQT 279
Q ++++GG +RVSR Q ++V P D+S+D + L +
Sbjct: 214 QGIIHLGGKERVSRYQFGLLMAAVFNLPKEQIKPCLQSDVPMSAPRPQDVSLD-SSLAFS 272
Query: 280 LNIDPVTYK 288
L P++ K
Sbjct: 273 LGYQPLSIK 281
>gi|326928318|ref|XP_003210327.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Meleagris gallopavo]
Length = 342
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + +E ++ + P+ F V+L +
Sbjct: 37 RRVLITGATGLLGRAVFKEFNE---NNWNAVGCGYRRAQPK-----------FEQVNLLN 82
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 83 SVAVHDIIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVAAS--GNLAKEAAGIGAFL 139
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG +
Sbjct: 140 IYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG--EV 197
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P V+DV + L + + D ++
Sbjct: 198 ERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKRML-DPSIKGTF 256
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 257 HWSGNEQMTKYEMA 270
>gi|257058009|ref|YP_003135897.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
gi|256588175|gb|ACU99061.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
Length = 294
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 31/262 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G +G+LG HL Q + ++V T+ H+ +P + D L F +D+
Sbjct: 2 KKLLITGASGFLGWHLCQKAQQ----SWEVYGTYFNHNITIPNV--DLLKIDLTNF-LDI 54
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ + +PD +++ AA S P C+ P + IN+ +S+ +++ + E
Sbjct: 55 KT-------CINQLKPDGIIHLAAASKPNYCQIYPQESAKINIEASIN--IANLCSDLEI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I STD V++G+ Y+E D ++P++ YG+ KV AE+ + + R +++GP
Sbjct: 106 PCIFTSTDLVFDGLNPPYQETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGPA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP S I + L +G+++ F DE R PV +L L+ +K
Sbjct: 166 --SPTSASF-IDFFIKTLKEGKELSLFIDEFRTPVSSSTAADGLL------LALEKASGD 216
Query: 242 LLNVGGPDRVSRVQ----MAEV 259
+L++GG +R+SR Q MA+V
Sbjct: 217 ILHLGGKERISRYQFGLLMAQV 238
>gi|449475207|ref|XP_002189542.2| PREDICTED: methionine adenosyltransferase 2 subunit beta
[Taeniopygia guttata]
Length = 369
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 28/258 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL----LLDALPHSFVFFDV 59
+RVL+ G TG LG+ + + +E ++ + P+ LLD + + D
Sbjct: 64 RRVLITGATGLLGRAVFKEFNE---NNWNTVGCGYRRAQPRFEHVNLLDCIAVHDIIHDF 120
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QP V+V+CAA P V E PD+A +NV +S L+
Sbjct: 121 ----------------QPHVIVHCAAERRPDVVEGQPDAASQLNVAASAN--LAKEAAGV 162
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++STD V++G YKE D P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 163 GAFLIYISTDYVFDGTSPPYKETDVPNPLNLYGKTKLEGEKAVLENNEETAVLRIPVLYG 222
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S D V + H + R P V+DV + L + + D +
Sbjct: 223 --EVERLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAAVCRQLAEKRML-DPSI 279
Query: 240 QLLLNVGGPDRVSRVQMA 257
+ + G +++++ +MA
Sbjct: 280 KGTFHWSGNEQMTKYEMA 297
>gi|338213431|ref|YP_004657486.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
gi|336307252|gb|AEI50354.1| dTDP-4-dehydrorhamnose reductase [Runella slithyformis DSM 19594]
Length = 298
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 22/256 (8%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPY--DVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G G LGQ L++ L + P+ +A + LP + ++ +D+
Sbjct: 2 KKILITGSNGLLGQKLVELLLK---HPHIQCIATARGANRLP------FTEGYDYYSMDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + K +PDVV++ AA++ CE+D D+ + NV + V ++ +
Sbjct: 53 TKREEVEDIIGK-TKPDVVIHGAAMTNVDQCESDKDNCWAQNVHA--VQYIVDACRTYDI 109
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L H+STD +++G Y EE E P++ YG SK AAEK + +AI R+ ++YG
Sbjct: 110 FLCHVSTDFIFDGAAGPYTEEGEANPLSFYGWSKYAAEKIVQHSGIRWAIARTVLVYG-- 167
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ ++ I W+ L + ++ D+ R P D+ +L D++
Sbjct: 168 IAHDMSRTNIILWVKKSLEDAKNIKVVTDQWRTPTLAEDLA------MGCFLIADQEATG 221
Query: 242 LLNVGGPDRVSRVQMA 257
+ N+ G D ++ +MA
Sbjct: 222 IFNISGKDFLTPYEMA 237
>gi|292656186|ref|YP_003536083.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
gi|291370755|gb|ADE02982.1| RmlD substrate binding domain superfamily [Haloferax volcanii DS2]
Length = 300
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 18/235 (7%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VK 136
D+V+NCAA + CE++P+ A ++N + L++ +++E IH STD V++G
Sbjct: 63 DLVINCAAYTDVDGCESNPEVATAVN--GTAPGDLAAVCDDREIPFIHYSTDYVFDGETD 120
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
FY+E DE AP+ YG+SK+ E + + + ILR S +YG + + P QW+
Sbjct: 121 GFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLSFVYGARGDTSDLVGFP-QWVA 179
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS-------------EDKQMQLLL 243
S L+ G+ V F D+ P +V L L + +S D ++
Sbjct: 180 STLAAGDTVPLFTDQTMTPSRAGNVATTTLELLDAGVSGTFHVASQSAVTPSDFGEKICE 239
Query: 244 NVGG-PDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAA 297
+GG + MA++DR P +D++ + L T +D + AA
Sbjct: 240 VIGGDATLIESSVMADLDRPAARPRRSCLDVSNVEGELGCSQPTLEDDLAALEAA 294
>gi|410029346|ref|ZP_11279182.1| dTDP-4-dehydrorhamnose reductase [Marinilabilia sp. AK2]
Length = 305
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 42/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDV-DL 61
K+VL+ G G LGQ L+ L + Y+V AT + LP+ D + ++ DV DL
Sbjct: 2 KKVLITGANGLLGQKLVYKLKG--NQRYEVYATGRGKSRLPKEWGDG--YHWLSLDVTDL 57
Query: 62 KSG-SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ FD V +PD +++ AA++ CE + ++ NV + VN L+ E +
Sbjct: 58 EQVIHVFDKV-----KPDFLIHTAAMTHVDECELNQEACELQNVEA--VNNLNQACEKQR 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD ++ G Y E PVN YG +K+ +E+ + +AI R+ ++YG
Sbjct: 111 THFIHLSTDFIFSGADGPYDENAIPDPVNYYGVTKLKSEELLRSSSLKWAIARTVLVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S I W+ + L G+ ++ +D+ R P D+ + + +K+
Sbjct: 170 -IAADMSRSNIILWVKNSLENGKNIQVVNDQWRTPTLAEDLADGCILIM------EKEAT 222
Query: 241 LLLNVGGPDRVSRVQMA---------------EVDRGV-----QSPADISMDITKLVQTL 280
+ N+ G D ++ MA EVD + + P I K V L
Sbjct: 223 GVFNISGKDMLTPYDMAMMTADYFGLDKSLIQEVDSTIFTQPAKRPLKTGFIIKKAVNEL 282
Query: 281 NIDPVTYKDGVKL 293
P ++ DG+ +
Sbjct: 283 GYSPKSFTDGIGI 295
>gi|393796123|ref|ZP_10379487.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
BG20]
Length = 296
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 38/277 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH---HSTPLPQLLLDALPHSFVFFDVDL 61
+ +V G G +G L+ L + Y H H P LD L +L
Sbjct: 2 KYVVTGSAGLIGNQLVSDLEQSGQTVYSCYNKHKPLHGIPTK---LDLL---------NL 49
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K S L+ QPDV+++ AAL+ CE++P+ A IN ++ + T
Sbjct: 50 KEISN----VLRKLQPDVIIHLAALTDVEKCESEPNLAYLINTKAT--EHIVKETNQIGC 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L +LSTD V++G K Y E+D P+N YGK+K+ EK + S+++I+R+S +G
Sbjct: 104 FLTYLSTDYVFDGKKGLYYEDDFPNPLNQYGKTKLEGEKAVEHCISHWSIIRTSTPFGNH 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
I ++ P+ WI + K + D+ P YV ++ K+I+ +T L
Sbjct: 164 LIK---QTFPL-WIIENIKKNNMLNLIEDQFTTPTYVPNLTKMIIDVTTNNLVG------ 213
Query: 242 LLNVGGPDRVSRVQMAE-------VDRGVQSPADISM 271
++ G R+SR A+ +D+ P + M
Sbjct: 214 YFHLSGSTRISRYSFAKMIADKLNLDKSFLKPVKMDM 250
>gi|309789989|ref|ZP_07684565.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG-6]
gi|308228009|gb|EFO81661.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6]
Length = 293
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 146/313 (46%), Gaps = 55/313 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH-HSTPLPQLLLDALPHSFVFFDVDLK 62
+R+ + GGTGYLG LL+ ++E + V A++ H P A P + + +DL+
Sbjct: 3 ERIFITGGTGYLGTALLR---QLELRAAHVGASYLHQPP------TAFP-NVAWVRMDLR 52
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A+ F QP +++ A + +PD S L+ +++ +
Sbjct: 53 EPEEVRAILHAF-QPTAIIHTA------FVQYEPDLLAITGYGSGLIAEIAASLGAR--- 102
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+S+D +++G ++ Y E D P++ YG++K AE+ + ++R+S+IYG
Sbjct: 103 LIHMSSDVIFDGERTGPYTENDAPNPISAYGEAKALAERLVQAAYPAATLVRTSLIYG-- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P+ + ++ + + F DE RCP++V D+ ++ L N +
Sbjct: 161 -FAPIDRQ--TRFALEIAAGQRSDRLFSDEYRCPIFVDDLAAALIELLN------TEHTG 211
Query: 242 LLNVGGPDRVSRVQMA------------EVDRG------VQSPADISMDITKLVQTLNID 283
+LN+ G +RVSR ++ ++ G V+ P + S+DI++ L+
Sbjct: 212 VLNIAGAERVSRYELGCLLAQALGYNPDQIQAGRSAELPVRRPRNCSLDISRAQALLH-- 269
Query: 284 PVTYKDGVKLTLA 296
T GV+ LA
Sbjct: 270 --TRLRGVREVLA 280
>gi|383318636|ref|YP_005379477.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
gi|379320006|gb|AFC98958.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
Length = 280
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 142/300 (47%), Gaps = 54/300 (18%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+++V G+G LG +++ L + ++V T++ TP + D+ + G+
Sbjct: 1 MILVTGSGLLGSDMIRVLR----REHEVVGTYNKTP---------KEGTIRLDITDREGT 47
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A++ +P+ VV+ AAL+ CE+ AM++N + + + +++
Sbjct: 48 ---IRAIRELKPEYVVHTAALTNVDYCEDHEAEAMAVNGQGT--KNVVDAARAAGSKVVY 102
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G + Y+E+D++ P++ Y +SK+ E + E+ +F I R+S++YG
Sbjct: 103 VSTDYVFDGSRGMYREDDDVCPISAYARSKLMGELHV-EEMEDFIIARTSVVYGN----- 156
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ + W+ L+KG++++ D+ P D + + AL S + +
Sbjct: 157 -ARQNFVSWVKDSLAKGQRIKVVTDQFNSPTLSYDCAEAVAALIRSGASG------IYHT 209
Query: 246 GGPDRVSRVQMAE-------VDRGV-------------QSPADISMDITKLV---QTLNI 282
G +R+SR + A +D G+ + P D S+D+T++ + LNI
Sbjct: 210 AGSERISRYEFARKIALFYGLDLGLIEPVPTSALSQKARRPMDSSLDVTRISAYHRMLNI 269
>gi|406662690|ref|ZP_11070779.1| dTDP-4-dehydrorhamnose reductase [Cecembia lonarensis LW9]
gi|405553312|gb|EKB48580.1| dTDP-4-dehydrorhamnose reductase [Cecembia lonarensis LW9]
Length = 305
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHS-TPLPQLLLDALPHSFVFFDVDLK 62
K+VL+ G G LGQ L+ L E Y V AT + LP + F + +D+
Sbjct: 2 KKVLITGANGLLGQKLVFKLKE--ESTYQVFATGRGESRLP----NEWGTGFKWESLDV- 54
Query: 63 SGSGFDAVALKF--GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ D V F +PD +++ AA++ CE +P++ NV + V L E
Sbjct: 55 --TDLDEVLAIFEKNKPDFLIHTAAMTNVDECELNPEACDVQNVNA--VQNLIDACEVHR 110
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
IHLSTD ++ G + Y E+ PVN YG SK+ +E + +AI+R+ ++YG
Sbjct: 111 THFIHLSTDFIFSGAEGPYDEDALPDPVNYYGSSKLKSEMLVRSSNLKWAIVRTVLVYG- 169
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S I W+ L G+ ++ +D+ R P D+ + L +K+
Sbjct: 170 -IAADMSRSNIILWVKKSLENGKSIQVVNDQWRTPTLAEDLADGCILLM------EKEAT 222
Query: 241 LLLNVGGPDRVSRVQMA---------------EVDRGV-----QSPADISMDITKLVQTL 280
+ N+ G D ++ +MA EVD V + P I K + L
Sbjct: 223 GVFNISGKDMLTPYEMAILTADYFGLNKSLIQEVDSTVFTQPAKRPLKTGFIIKKAMNEL 282
Query: 281 NIDPVTYKDGVKL 293
P ++ DG+ +
Sbjct: 283 GYSPKSFTDGIGI 295
>gi|218244985|ref|YP_002370356.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
gi|218165463|gb|ACK64200.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
Length = 294
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 31/262 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDVDL 61
K++L+ G +G+LG HL Q + ++V T+ H +P + D L F +D+
Sbjct: 2 KKLLITGASGFLGWHLCQKAQQ----SWEVYGTYFNHKITIPNV--DLLKIDLTNF-LDI 54
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K+ + +PD +++ AA S P C+ P + IN+ +S VN +++ + E
Sbjct: 55 KT-------CINQLKPDGIIHLAAASKPNYCQIYPQESAKINIEAS-VN-IANLCSDLEI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I STD V++G+ + YKE D ++P++ YG+ KV AE+ + + R +++G
Sbjct: 106 PCIFTSTDLVFDGLNAPYKETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFG-- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP S I + + L +G+++ F DE R PV +L L+ K
Sbjct: 164 LASPTSASF-IDFFINTLKEGKELSLFIDEFRTPVSSSTAADGLL------LALQKASGN 216
Query: 242 LLNVGGPDRVSRVQ----MAEV 259
+L++GG +R+SR Q MA+V
Sbjct: 217 ILHLGGKERISRYQFGLLMAQV 238
>gi|40714032|dbj|BAD06938.1| methionine adenosyltransferase II beta subunit [Mus musculus]
Length = 334
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 41/312 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL+ G TG LG+ + + E + + P+ F V+L
Sbjct: 29 RRVLITGATGLLGRAVYK---EFQQSNWHTVGCGFRRARPK-----------FEQVNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F QP V+V+CAA P V E+ PD+A +NV +S L+ L
Sbjct: 75 SEAVHHLIHDF-QPHVIVHCAAEGRPDVVESQPDAASQLNVGAS--GNLAKEAAAIGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V +G Y EED +P+N+YGK+K+ EK E A+LR ++YG +
Sbjct: 132 IYISSDYVLDGTNPPYTEEDIPSPLNLYGKTKLDGEKAALENNLGAAVLRIPVLYG--EV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L + + D ++
Sbjct: 190 EKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKGTF 248
Query: 244 NVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLNIDP 284
+ G +++++ +MA G Q P + +D +KL +TL I
Sbjct: 249 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPKNAQLDCSKL-ETLGIGQ 307
Query: 285 VT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 308 RTPFRTGIKESL 319
>gi|448310069|ref|ZP_21499921.1| dTDP-4-dehydrorhamnose reductase [Natronorubrum bangense JCM 10635]
gi|445588399|gb|ELY42642.1| dTDP-4-dehydrorhamnose reductase [Natronorubrum bangense JCM 10635]
Length = 297
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 31/309 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G +G L++ + E ++V T+H T P ++ L ++DL+
Sbjct: 3 ILVIGANGLVGSSLVRTCLDRE---HEVIGTYH-TERPDFDIELL-------ELDLRDSD 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
AV + P VVNCAA + CE +P++A ++N V L+ ++ +H
Sbjct: 52 RIRAVVERVA-PTAVVNCAAYTDVDGCEQNPETAHAVNAEGPGV--LAEVCAERDVSFVH 108
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G + Y E+D+ P+ VYG++K+ E+ + E S + R S ++G +
Sbjct: 109 FSTDYVFGGEAEEPYTEDDDPNPIQVYGETKLEGEQRVLEAHSGAIVCRLSFVWGRHGAT 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------------TNRW 232
P+ P W+ GE V F D+ P D +++L L +
Sbjct: 169 GDPEGFP-AWVLGRAQSGEVVPLFTDQKVTPTRAGDASEVVLELLECDVAGLFHVASQDC 227
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQ---MAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
++ + +L+L P ++ + +V+R P + ++V++L D T +
Sbjct: 228 VTPYEFGRLILEEKEPSTTGLLEESSLEDVERAAPRPGYTCLSTDRVVKSLGHDRPTVEA 287
Query: 290 GVKLTLAAE 298
V L+ E
Sbjct: 288 AVSTVLSTE 296
>gi|296482879|tpg|DAA24994.1| TPA: methionine adenosyltransferase 2 subunit beta-like [Bos
taurus]
Length = 334
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 41/315 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVL+ G TG G+ + + E + + P+ F V+
Sbjct: 26 IPNRRVLITGATGLFGRAVYK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 71
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 72 LLDSNAVHHIIYDF-QPHVIVHCAAERRPDVVENHPDTASQLNVDAS--GNLAKEAAAIG 128
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI++S+D V++G Y+EED P+N+YGK+K+ EK E A+LR ++YG
Sbjct: 129 AFLIYISSDYVFDGTNPPYREEDIPNPLNLYGKTKLEGEKADLENNLGAAVLRIPVLYG- 187
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 188 -EVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIK 245
Query: 241 LLLNVGGPDRVSRVQMAEVDR-------------------GVQSPADISMDITKLVQTLN 281
+ G +++++ +MA G P + +D ++L +TL
Sbjct: 246 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAHRPRNAQLDCSRL-ETLG 304
Query: 282 IDPVT-YKDGVKLTL 295
I T ++ G+K +L
Sbjct: 305 IGQRTPFRIGIKESL 319
>gi|326434355|gb|EGD79925.1| hypothetical protein PTSG_10207 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKSG 64
VL+ G GY+ H++ L + + + P PQ +L PH V + ++LK
Sbjct: 50 VLITGANGYVASHVITVLDN-QWRHGKLRLWASGLP-PQTVLTN-PHLDVLRERLELKDD 106
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN--- 121
G F PD++++ AA+S +C ++PD A +IN + L+ T +K
Sbjct: 107 KGIQDGVRAF-DPDLILHFAAMSSTSLCASNPDLAWNINAEGTRRLALALTTTHKSTTAH 165
Query: 122 -----------LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L + +STD VY+G + +E VYG++K AAE+ A
Sbjct: 166 QQQQQQQQQHPLFVLISTDWVYDGTAANVREHAPAPGFGVYGQTKAAAEEATSSVLGEHA 225
Query: 171 -ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
ILRS++++GP ++ + + W+ L E++ + DE R PVYV D+ +++L
Sbjct: 226 LILRSALVFGPPSLVDARRRSTLGWMADALRNYERITAYEDEYRTPVYVGDIARLML 282
>gi|193216392|ref|YP_001997591.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
gi|193089869|gb|ACF15144.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC
35110]
Length = 307
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFVFFDVD 60
S KRVL+ G G LGQ L + + YD+ AT TP Q SF F +D
Sbjct: 4 SYKRVLITGANGLLGQKLTDCFAA--DRAYDLLATARQPTPYNQ------TASFGFISLD 55
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + F +P+ +VN A + CE + D NV + V L++ +
Sbjct: 56 MLDRQAVKELVWNF-EPNFIVNAGAYTNVDGCEKEKDLCWKGNVIA--VENLAAAARLVK 112
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
++H+STD +++G Y E + P++ YG+SK+A+E + ++AI+R+ ++YG
Sbjct: 113 AQVVHVSTDYIFDGKNGPYDEAQQPNPLSYYGRSKLASENVLRNSGEHWAIIRTMVVYG- 171
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ K+ + W+ L G++V D+ D+ + I L N K
Sbjct: 172 -VAAQCKKNFAL-WLAGELKAGKQVRIVDDQFGNTTLADDLARGIYMLVN------KAKH 223
Query: 241 LLLNVGGPDRVSR----VQMAEV---DRGVQSPADISMDITKLVQ 278
+ N+ G D VSR +++AEV D+ + +P + D+++L +
Sbjct: 224 GVYNMVGGDNVSRYEFALRLAEVFGFDKNLITPIKTA-DLSQLAE 267
>gi|434387600|ref|YP_007098211.1| dTDP-4-dehydrorhamnose reductase [Chamaesiphon minutus PCC 6605]
gi|428018590|gb|AFY94684.1| dTDP-4-dehydrorhamnose reductase [Chamaesiphon minutus PCC 6605]
Length = 293
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 46/294 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G+LG +L Q ++ T+ + + D H +D +
Sbjct: 3 KLLITGVSGFLGWNLCQQARS----QWETHGTYSQNAIE--ISDVRLHQIDLTQLDAVTA 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DA+A PD +++ AA + P C+ P+ + IN+ +S L+ + +
Sbjct: 57 K-IDAIA-----PDAIIHTAAAASPNFCQTHPELSARINIGAS--QLLAKICNRAKIPFV 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G + Y+E D ++P+N+YG+ KVAAE+ I + I R +++G
Sbjct: 109 FTSTDLVFDGKNAPYRETDPVSPLNIYGEQKVAAERKILDTYPQATICRMPLMFG--MAP 166
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQLLL 243
P S WI + L+ + ++ F DE R PV + +++AL + +L
Sbjct: 167 PTASSFLQPWIKA-LAAEQTLQLFIDEFRTPVSAVTAARGLLMAL--------RSSPGIL 217
Query: 244 NVGGPDRVSRVQMAEV------------------DRGVQSP--ADISMDITKLV 277
N+GG +R+SR + + D + +P AD+S+D TK +
Sbjct: 218 NLGGKERLSRYEFGRLLAEAFGFDLSLLLPISQRDLPMAAPRAADVSLDSTKAI 271
>gi|417764863|ref|ZP_12412830.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417771570|ref|ZP_12419464.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418683522|ref|ZP_13244721.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418697021|ref|ZP_13258022.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
str. H1]
gi|418708110|ref|ZP_13268923.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418728723|ref|ZP_13287294.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12758]
gi|421127687|ref|ZP_15587908.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421134312|ref|ZP_15594453.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|289451026|gb|ADC93942.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar
Autumnalis]
gi|289451110|gb|ADC94025.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar
Grippotyphosa]
gi|400324753|gb|EJO77043.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353307|gb|EJP05483.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409946357|gb|EKN96367.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409955188|gb|EKO14128.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
str. H1]
gi|410021611|gb|EKO88395.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410434746|gb|EKP83881.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410771600|gb|EKR46801.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776575|gb|EKR56552.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12758]
gi|455669232|gb|EMF34388.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 296
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 55/317 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K + TH L + LD + ++D
Sbjct: 1 MDSNTILITGASGLLGHHLSRFFLENGNKVIALRKTH---SLGIIGLDEI-------EID 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP-SSLVNWLSSFTENK 119
L + + K G PD +++CA L+ CE + A I++ S ++ +S +K
Sbjct: 51 LLDFNTVKNLLTKIG-PDYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD +++G E+ + P+NVYGK+K +E+ + S ILR++ +G
Sbjct: 110 ---MIHISTDHLWDGTMQMVTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRTN-FFG 165
Query: 180 P-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
P Q++S WI + L++ EK+ F D P+ + + ++IL L
Sbjct: 166 PGLQWRQSLS--------DWIINSLNRNEKINAFSDVFFTPISIYHLARVILFLI----- 212
Query: 235 EDKQMQLLLNVGGPDRVSRVQMA-----------EVDRGVQ---------SPADISMDIT 274
K+ + + + G +R+S+ A E+ R + P D+S+
Sbjct: 213 -QKKAKGIYHTVGSERISKYDFAISIAKSFNKSTELIRPISIQNIQFNALRPLDMSLSTD 271
Query: 275 KLVQTLNIDPVTYKDGV 291
K+V LN+ T + G+
Sbjct: 272 KIVGFLNVSMPTVQAGI 288
>gi|119486569|ref|ZP_01620619.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
gi|119456186|gb|EAW37318.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC
8106]
Length = 291
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG ++ Q I ++V T+ S + +P + DL
Sbjct: 2 KKILVTGASGFLGWNICQ----IAASQWEVYGTYRSKAV------KIPGVNII-QRDLTD 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G A+ + QP +++ AA S P C+ PD INV +S+ L+ +
Sbjct: 51 FQGLKALIEEI-QPTAIIHAAAQSKPNYCQLHPDETYPINVTASIN--LAGLCADYSIAC 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
STD V+ G+ YKE D ++PV++YG+ KVAAE+ + E+ A+ R +++G
Sbjct: 108 AFTSTDLVFNGLNPPYKETDPVSPVSIYGEQKVAAEQGMLERNPQVAVCRMPLMFG--KA 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP S IQ L G++++ F DE R V + +L + + +L
Sbjct: 166 SPHAVSF-IQGFVQALKAGKELQVFTDEYRTSVSGTTAAEGLLLAL-------AKAKGIL 217
Query: 244 NVGGPDRVSRVQ----MAEV------------DRGVQSPA----DISMDITKLVQTLNID 283
++GG +R+SR MAEV + VQ PA D+S+D +K L
Sbjct: 218 HLGGKERMSRYDFAQLMAEVFELPIEKIQPCLQQDVQMPASRPPDVSLDSSKAF-GLGYQ 276
Query: 284 PVTYKD 289
P++ ++
Sbjct: 277 PLSIRE 282
>gi|318065111|ref|NP_001188160.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus]
gi|308323562|gb|ADO28917.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus]
Length = 322
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 48/315 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + ++V ++ P+ F +L
Sbjct: 18 RRVLVTGATGLLGRAVYK---EFQNNDWEVLGCGYTRARPR-----------FLSCNLLD 63
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AV F QP V+V+CAA P V E+ ++A+++NV + + E L
Sbjct: 64 EEAVRAVIHNF-QPHVIVHCAAERRPDVVEHHTEAALNLNVHACA----TLAKEAAGIFL 118
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y D P+N+YGKSK+ E+ I C AILR I+YG +
Sbjct: 119 IYISTDYVFDGRNPPYGGNDTPNPLNMYGKSKLKGEEEILRHCPGAAILRVPILYG--EV 176
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-- 241
V +S D + E H + R P Y DV WL + + L
Sbjct: 177 EKVEESAVTVLWDCIQEGAESSTVDHCQQRFPTYTSDV----HVSAGIWLIDVSGLILHG 232
Query: 242 LLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKL-VQTL 280
+ + G +++++ ++A G Q P + ++ ++L + L
Sbjct: 233 IFHYSGKEQMTKYEIACAIADAFNLPRSHLIPLTEQPAGAGAQRPQNAQLECSRLDLLGL 292
Query: 281 NIDPVTYKDGVKLTL 295
+++P +K ++ L
Sbjct: 293 SVEPTPFKTAIRNCL 307
>gi|434398695|ref|YP_007132699.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
gi|428269792|gb|AFZ35733.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
Length = 295
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 31/258 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G +G+LG ++ Q L++ + + Y +H++ Q ++ DL
Sbjct: 2 NKLLITGVSGFLGWNIYQ-LAKSQWQVYGTCYSHYNLYSQQNIIK----------TDLT- 49
Query: 64 GSGFDAVALK--FGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D VALK F P V++ AA S P C+ +P + INV +S+ L+
Sbjct: 50 ----DLVALKNLFKTIDPSAVIHTAAASKPNFCQTNPIESYEINVTASMN--LAHLCAEY 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ I STD V++G Y E D ++P++ YG+ KV AE+ + E A+ R +++G
Sbjct: 104 QIPCIFTSTDLVFDGQNPPYSETDPVSPISYYGEQKVVAEQQMLEIYPATAVCRMPLMFG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
SP S +ID+ L G+++ F DE R P V +A L+ ++Q+
Sbjct: 164 --MPSPTANSFIQGFIDN-LQTGKELNLFIDEFRTP------VSGTMAAQGLLLALEQQV 214
Query: 240 QLLLNVGGPDRVSRVQMA 257
LL++GG +R+SR Q
Sbjct: 215 SGLLHLGGKERISRYQFG 232
>gi|343083516|ref|YP_004772811.1| dTDP-4-dehydrorhamnose reductase [Cyclobacterium marinum DSM 745]
gi|342352050|gb|AEL24580.1| dTDP-4-dehydrorhamnose reductase [Cyclobacterium marinum DSM 745]
Length = 315
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 147/311 (47%), Gaps = 37/311 (11%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K ++L+ G G LGQ +++ + IEGK +A S LP +V+ ++D+
Sbjct: 10 KPKILITGANGLLGQKIIKEIL-IEGKYEAIATGRGSCRLPTEW-----RGYVYEEMDIT 63
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S A+ K P V++ A+++ CE + + NV ++L N + E ++
Sbjct: 64 KPSEVLAI-FKAYAPQYVIHAASMTDVDRCEVNRHTCFEQNVTATL-NIMKG-CELVKSH 120
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI +STD +++G Y E + P+N YGK+K+ E + + N+ I+R++++YG
Sbjct: 121 LIFISTDFIFDGKNGPYDELAKPNPLNYYGKTKIETEIAVQKYKHNWTIVRTNLVYG--I 178
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S + W+ L + +++ D+ R P D+ K L + +K +
Sbjct: 179 AHDMSRSNIVLWVKKGLEQNKELSLVDDQFRTPTLAEDLAKGCLLIV------EKNATGI 232
Query: 243 LNVGGPDRVSRVQMA-------EVD-RGVQS------------PADISMDITKLVQTLNI 282
N+ G + +S MA E+D +G++ P +DI+K LN
Sbjct: 233 YNISGDELLSPYDMAMLTVKFFELDPKGIKKTDSSVFSQVASRPLRTGLDISKAKNILNF 292
Query: 283 DPVTYKDGVKL 293
P T+++G+++
Sbjct: 293 KPKTFEEGIEI 303
>gi|83523771|ref|NP_001016828.2| methionine adenosyltransferase 2 subunit beta [Xenopus (Silurana)
tropicalis]
gi|82178023|sp|Q566L8.1|MAT2B_XENTR RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|62203140|gb|AAH93462.1| methionine adenosyltransferase II, beta [Xenopus (Silurana)
tropicalis]
Length = 334
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FEYLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 AAAVKALIQDF-KPHVIIHCAAERRPDIVESQPEFASLLNVVAS--ENLAKEAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L LT R L +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRL-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQM 256
+ G +++++ +M
Sbjct: 249 HWSGNEQMTKYEM 261
>gi|431797117|ref|YP_007224021.1| dTDP-4-dehydrorhamnose reductase [Echinicola vietnamensis DSM
17526]
gi|430787882|gb|AGA78011.1| dTDP-4-dehydrorhamnose reductase [Echinicola vietnamensis DSM
17526]
Length = 310
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVD 60
+K +LV G G LGQ L+ L +E + V AT + LPQ F + +D
Sbjct: 7 NKPTLLVTGANGLLGQKLVNRL--LEKDSFHVIATGRGACRLPQTW-----EGFTYASMD 59
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ V ++ P+VV++ AA++ CE ++ NV + V + E
Sbjct: 60 ITDKENVLEVFQRYS-PEVVIHGAAMTNVDECETAQEACYQQNVAA--VGNIIVAAEQYH 116
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ L+H+STD +++G Y E+ PVN YG++K+ AE I + N+ I R+ ++YG
Sbjct: 117 SFLVHVSTDFIFDGEAGPYTEDAVPNPVNYYGETKLQAEALIQQSSLNWGIARTVLVYGI 176
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ +S + W+ L +G+ ++ D+ R P D+ + + L +++ +
Sbjct: 177 S--HDMSRSNIVLWVKKSLEEGKDLQLVDDQLRTPTLAEDLAEGCI------LMAEQRAK 228
Query: 241 LLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQT 279
+ N+ G + ++ MA +Q+ +D TK+ +T
Sbjct: 229 GVFNISGDELLTPYDMA-----IQTAEFFKLDKTKINKT 262
>gi|390438373|ref|ZP_10226849.1| Genome sequencing data, contig C275 [Microcystis sp. T1-4]
gi|389838224|emb|CCI30973.1| Genome sequencing data, contig C275 [Microcystis sp. T1-4]
Length = 292
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 49/307 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHH-STPLPQLLLDALPHSFVFFDVDLK 62
K +L+ G +G+LG H+ Q + + H+ ++ P L+ V+L
Sbjct: 2 KTLLITGVSGFLGWHIYQK-TRSSWASFGTYFNHNVNSNDPNLI-----------KVNLT 49
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + +PD V++ AA S P +C+ P ++ +IN+ +SL ++
Sbjct: 50 DLAAVKEIFQRI-KPDAVIHGAAQSKPNLCQEFPQASEAINLTASL--EIARLCSQYHIP 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G + Y E ++PV+VYG+ KVAAEK I AI R +++G +
Sbjct: 107 LVFTSTDLVFDGKNAPYSEHGPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFG--S 164
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
SP S +Q L +G+++ F DE R V V V ++LAL +++Q
Sbjct: 165 PSPSANSF-LQPFLKTLQEGKELSLFTDEYRTAVGVNSAVDGLLLAL--------EKVQG 215
Query: 242 LLNVGGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLVQTLN 281
++++GG +RVSR Q ++V P D+S+D + L +L
Sbjct: 216 IIHLGGKERVSRYQFGLLMAAVFNIPREQIKPCLQSDVPMSAPRPQDVSLD-SSLAFSLG 274
Query: 282 IDPVTYK 288
P++ K
Sbjct: 275 YQPLSIK 281
>gi|91202782|emb|CAJ72421.1| similar to dTDP-6-deoxy-L-lyxo-4-hexulose reductase (Rmld)
[Candidatus Kuenenia stuttgartiensis]
Length = 288
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 50/294 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGL---SEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++L++G G LG L GL SE E +P V HS +++
Sbjct: 2 KILIIGSNGALGWELRNGLPHLSETEKQPLSVICASHS------------------QIEI 43
Query: 62 KSGSG-FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S F+A+A PDV++NCAA + CE + A ++N + L+ +N
Sbjct: 44 TNASNTFEAIARTM--PDVIINCAAFTDVDACETNIGKAYAVNADGAKNVALAG--KNLH 99
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G K+ Y E D P++VYG+SK A E+ + E N+ I+R S +YG
Sbjct: 100 ARVIHISTDYVFDGAKNTPYNETDLPRPLSVYGRSKRAGEEAVQEINGNYTIIRISRLYG 159
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI-----------ILAL 228
+ V K L + V+S D+ P Y D+V I +
Sbjct: 160 QHKSNFVTKILHLGLEKHVVS------VVTDQFGSPTYAADLVHALWYVLSLDLHGIYHI 213
Query: 229 TN----RWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQ 278
N W +++ L N+ + ++ + R P + S++ TK VQ
Sbjct: 214 ANDGICSWYEWAREIFRLSNI--QVSLQSIKAEDFKRAATVPQNSSLNCTKFVQ 265
>gi|126176068|ref|YP_001052217.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155]
gi|386342822|ref|YP_006039188.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS117]
gi|125999273|gb|ABN63348.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155]
gi|334865223|gb|AEH15694.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS117]
Length = 304
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 117/222 (52%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAF-IAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ S+ + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIESRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|418722899|ref|ZP_13281873.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12621]
gi|409963733|gb|EKO27456.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. UI 12621]
gi|456822228|gb|EMF70714.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Canicola str. LT1962]
Length = 296
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 55/317 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K + TH L + LD + ++D
Sbjct: 1 MDSNTILITGASGLLGHHLSRFFLENGNKVIALRKTH---SLGIIGLDEI-------EID 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVP-SSLVNWLSSFTENK 119
L + + K G PD +++CA L+ CE + A I++ S ++ +S +K
Sbjct: 51 LLDFNIVKNLLTKIG-PDYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSK 109
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD +++G E+ + P+NVYGK+K +E+ + S ILR++ +G
Sbjct: 110 ---MIHISTDHLWDGTMQMVTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRTN-FFG 165
Query: 180 P-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
P Q++S WI + L++ EK+ F D P+ + + ++IL L
Sbjct: 166 PGLQWRQSLS--------DWIINSLNRNEKINAFSDVFFTPISIYHLARVILFLI----- 212
Query: 235 EDKQMQLLLNVGGPDRVSRVQMA-----------EVDRGVQ---------SPADISMDIT 274
K+ + + + G +R+S+ A E+ R + P D+S+
Sbjct: 213 -QKKAKGIYHTVGSERISKYDFAISIAKSFNKSTELIRPISIQNIQFNALRPLDMSLSTD 271
Query: 275 KLVQTLNIDPVTYKDGV 291
K+V LN+ T + G+
Sbjct: 272 KIVGFLNVSMPTVQAGI 288
>gi|115530810|emb|CAL49345.1| methionine adenosyltransferase II, beta [Xenopus (Silurana)
tropicalis]
Length = 334
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENNWHVLGCGYSRARPR-----------FEYLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 AAAVKALIQDF-KPHVIIHCAAERRPDIVESQPEFASLLNVVAS--ENLAKEAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSIPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P YV+DV + L LT R L +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANMDHWQQRFPTYVKDVASVCLQLTERRL-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQM 256
+ G +++++ +M
Sbjct: 249 HWSGNEQMTKYEM 261
>gi|434394824|ref|YP_007129771.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 7428]
gi|428266665|gb|AFZ32611.1| dTDP-4-dehydrorhamnose reductase [Gloeocapsa sp. PCC 7428]
Length = 301
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 38/230 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+ +L++G TG LGQ L + L++I DV A T +DL
Sbjct: 2 RPSILLIGNTGQLGQQLQRYLAQI----VDVTAVGRPT------------------IDLT 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ K QP +++N AA + E +P+ A +IN + + L++ + +
Sbjct: 40 QPDSLRQIIRKV-QPQIIINAAAYTAVDKAETEPEVASAINAIAPGI--LAAEAQQLHSH 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G +S Y+E D P+ VYG+SK+A E+ I + C + ILR++ +YG
Sbjct: 97 LIHISTDYVFDGCQSHPYQETDATNPLGVYGRSKLAGEQAIQDNCDRYIILRTAWVYG-- 154
Query: 182 TISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
S ++ ++L G E++ D+ P + D+ + I L
Sbjct: 155 -------SHGNNFVKTMLRLGADREEIRVVADQIGSPTWTGDITRAIAQL 197
>gi|113971860|ref|YP_735653.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4]
gi|113886544|gb|ABI40596.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4]
Length = 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ AA H +A H DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---------AAGHRVIATGFSRAEAGIHRL-----DLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ +N + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEAAKNHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ E PVN YG SK+ E + FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAEPNPVNFYGASKLQGETCVLNTDRGFAVLRLPILYGE--VTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ +S + I+ +L S+ ++V+ H R P D+ I L R
Sbjct: 165 LSESAVLVLINQLLDSRPQRVD--HWAIRAPTSTADIANAIAKLIQR 209
>gi|389860502|ref|YP_006362741.1| dTDP-4-dehydrorhamnose reductase [Thermogladius cellulolyticus
1633]
gi|388525405|gb|AFK50603.1| dTDP-4-dehydrorhamnose reductase [Thermogladius cellulolyticus
1633]
Length = 298
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 22/253 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV GGTG LG L+ L E + ++V AT+H+T P + + + +V FD ++
Sbjct: 3 RVLVTGGTGLLGWSLVNRLVE---RGFEVYATYHATRPP--VAEGVKWVWVDFDDPHEAR 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+++ +P+VVV+ AA + CE + A+++N S+ L++ +
Sbjct: 58 PLVESL-----RPEVVVHAAAYTDVDGCEANKLLALNVNYVST--RELATACRGVCKYFV 110
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y+E D P+N YG +K+ E + + +LR+S +YG S
Sbjct: 111 YISTDYVFDGEKGLYREGDPPNPLNYYGLTKLMGEIAVAANLEYYLVLRTSGLYG---CS 167
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P K LS+G+ VE F D+ P Y D+ I L + + + L+
Sbjct: 168 PGGKRGFALDALGKLSRGQVVEAFVDQFLSPTYAPDLADAITRLL------EGRPRGFLH 221
Query: 245 VGGPDRVSRVQMA 257
V G +RVSR + A
Sbjct: 222 VAG-ERVSRYEFA 233
>gi|387198512|gb|AFJ68854.1| rossmann-fold nad -binding domain-containing protein, partial
[Nannochloropsis gaditana CCMP526]
Length = 278
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 19/167 (11%)
Query: 81 VNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--- 137
++ AA+S P C +P+ AM +N P +L++ + + E LL+ STDQV+ G S
Sbjct: 1 MHLAAMSSPAACARNPEKAMRVNCPLALLD--ALALHSPEALLVFFSTDQVFSGTVSPPA 58
Query: 138 FYKEEDEIA------PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP---K 188
Y E E PVNVYG+SK A E+ I ++ ILRSS I GP P P +
Sbjct: 59 LYSEAGESGRREEEEPVNVYGRSKRAFERAIQDRWPRHLILRSSNIIGP----PSPFLRQ 114
Query: 189 SLPIQWIDSVLSKG-EKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+QW+D +L +E F DECR +Y++DV+ ++ AL + + S
Sbjct: 115 GKFLQWLDELLETSVGPLELFDDECRSFLYLQDVLSLLCALLDSYRS 161
>gi|333910067|ref|YP_004483800.1| dTDP-4-dehydrorhamnose reductase [Methanotorris igneus Kol 5]
gi|333750656|gb|AEF95735.1| dTDP-4-dehydrorhamnose reductase [Methanotorris igneus Kol 5]
Length = 296
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 13/183 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + D A IN V ++ + L H+STD V++G
Sbjct: 63 NPDFVVNTAAMTNVDLCETEKDLAYKINALG--VKYIGEICKEITCSLCHISTDYVFDGE 120
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
K Y EEDEI P+N YG +K E+ + E + +I+R S+ P ISPV + W
Sbjct: 121 KGNYVEEDEINPINYYGYTKAEGERLLRELDYDLISIVRISV---PYCISPVKTNF-FMW 176
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L E V D+ P YV ++V+ I+ + + LL+ GG ++VSR
Sbjct: 177 VLEKLRNNEVVNAVIDQWNTPTYVNELVEGIVKIY------ENDFNGLLHFGGGEKVSRY 230
Query: 255 QMA 257
+ A
Sbjct: 231 EFA 233
>gi|160873576|ref|YP_001552892.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195]
gi|378706817|ref|YP_005271711.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678]
gi|160859098|gb|ABX47632.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195]
gi|315265806|gb|ADT92659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678]
Length = 304
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + +FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSDDFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ S+ + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIESRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|418025748|ref|ZP_12664725.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS625]
gi|353535009|gb|EHC04574.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS625]
Length = 304
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KILVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ + + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|344241545|gb|EGV97648.1| Hyaluronan mediated motility receptor [Cricetulus griseus]
Length = 843
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVLV G TG LG+ + + E + + P+ F V+L
Sbjct: 538 RRVLVTGATGLLGRAVYK---EFQQSNWHTIGCGFRRARPK-----------FEQVNLLD 583
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKEN 121
+ F QP V+V+CAA P V E+ PD+A +NV +S L +S
Sbjct: 584 SEAVHHLIHDF-QPHVIVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAASIG----A 638
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LI++S+D V++G Y EED P+N+YGK+K+ EK + E A+LR ++YG
Sbjct: 639 FLIYISSDYVFDGTDPPYTEEDIPNPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGE- 697
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S D V + H + R P +V+DV + L + + D ++
Sbjct: 698 -VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRML-DPSIKG 755
Query: 242 LLNVGGPDRVSRVQMA----------------EVDR---GVQSPADISMDITKLVQTLNI 282
+ G +++++ +MA D G Q P + +D +KL +TL I
Sbjct: 756 TFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQRPRNAQLDCSKL-ETLGI 814
Query: 283 DPVT-YKDGVKLTL 295
T ++ G+K +L
Sbjct: 815 GQRTPFRIGIKESL 828
>gi|448343110|ref|ZP_21532052.1| dTDP-4-dehydrorhamnose reductase [Natrinema gari JCM 14663]
gi|445624170|gb|ELY77559.1| dTDP-4-dehydrorhamnose reductase [Natrinema gari JCM 14663]
Length = 296
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
++LVVG G LG ++++ + + +DV T+HST PL Q
Sbjct: 2 QLLVVGANGLLGSNVVRASQQ---RGWDVYGTYHSTQPTFHIPLKQF------------- 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL+ F + L PDVV+NCAA++ CE +P+ A +N L++ +
Sbjct: 46 -DLREYDSFGDI-LTEHDPDVVINCAAMTDVDSCETNPEQAYVLN--GDAPGGLAAHCDA 101
Query: 119 KENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+H+STD V++G + Y E + V VYG+SK+A E+ + E+ ++ + R S +
Sbjct: 102 NGVEFVHISTDYVFDGTEREPYSESADTNAVQVYGESKLAGEQAVIEETTDALVARLSFV 161
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+G S P W+ L + + F D+ P KI+L L +
Sbjct: 162 WGIHCSSNDLTGFPA-WVRDQLQSDQDIPLFTDQWVTPTRAGQAAKILLDLVEQ 214
>gi|255099386|ref|ZP_05328363.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-63q42]
gi|255305244|ref|ZP_05349416.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile ATCC 43255]
Length = 290
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A S D+D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSINQPKYVILATTRS----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ + A IN V L+ +E LI
Sbjct: 48 TNVDNFILH-NKPDVVVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYGNGN- 163
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILAL 228
++ +++ + ++V +D+ P D+ KII+ +
Sbjct: 164 ---------NFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLAKIIIRI 202
>gi|423089711|ref|ZP_17078063.1| dTDP-4-dehydrorhamnose reductase [Clostridium difficile
70-100-2010]
gi|357557835|gb|EHJ39358.1| dTDP-4-dehydrorhamnose reductase [Clostridium difficile
70-100-2010]
Length = 290
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A S D+D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSINQPKYVILATTRS----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ + A IN V L+ +E LI
Sbjct: 48 TNVDNFILH-NKPDVVVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG 160
>gi|163846690|ref|YP_001634734.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl]
gi|222524495|ref|YP_002568966.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl]
gi|163667979|gb|ABY34345.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl]
gi|222448374|gb|ACM52640.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl]
Length = 285
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 33/257 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +R L+ GGTGYLGQ L++ + +AAT HS P L + +D
Sbjct: 1 MNGERYLITGGTGYLGQALIRHARCLG---VQIAATFHSQTPPALA------EVAWHPLD 51
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+ + A+ ++ QP V+V+ A + DPD + V ++
Sbjct: 52 LRDAAAVMAL-IREVQPTVIVHTA------FRQYDPDL---MAVTGEGAGHVAVAAAQIG 101
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LIH+S+D +++G K Y E+D P+ YG++K AE + AI+R+S+IYG
Sbjct: 102 ARLIHMSSDVIFDGEKGEPYTEDDPPNPITDYGRAKARAEALVQAAYPAAAIVRTSLIYG 161
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
P+ + +++GE+ E F DE RCP++V D+ ++ L R
Sbjct: 162 ---FEPMDRHTAFAL---AVARGERPERLFRDEFRCPIFVDDLAVALIDLAQR------D 209
Query: 239 MQLLLNVGGPDRVSRVQ 255
+ ++N+ G + +SR +
Sbjct: 210 YRGVINLAGAEILSRYE 226
>gi|388579495|gb|EIM19818.1| methionine adenosyltransferase II, beta [Wallemia sebi CBS 633.66]
Length = 294
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 19/225 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G +G LG+ +L S +G V +S +L+ DL
Sbjct: 3 KVLVTGASGLLGRAILDNFSN-DGS-IQVTGLAYSRSSDKLI-----------KCDLNDE 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V ++ QPDV+++CAA P V +NDP + +NV S LS +N +I
Sbjct: 50 KAIEGV-IREQQPDVLIHCAAERRPDVAQNDPAATEKLNVDVS--GNLSRLMKNIGGSII 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G K Y D P+N+YGK+K+A EK + + ILR ++YG +
Sbjct: 107 YISTDYVFDGTKPPYTTTDTPNPLNLYGKTKLAGEKAVTQNNDKSVILRVPVLYG--RVE 164
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+S ID+V +G+ + H R P V +V + ALT
Sbjct: 165 NTKESAVTILIDAV-KEGKAKKMEHYANRFPTNVDNVAIALNALT 208
>gi|217971668|ref|YP_002356419.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223]
gi|217496803|gb|ACK44996.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223]
Length = 304
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 116/222 (52%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATDPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ + + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|118431352|ref|NP_147762.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1]
gi|116062675|dbj|BAA80165.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1]
Length = 300
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 147/304 (48%), Gaps = 33/304 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV GGTG LG +L+Q L + K Y V T++ P L A + V+L+
Sbjct: 2 KLLVTGGTGLLGYNLVQQLLK---KGYSVYPTYNKNT-PFKLAGAR-----WSKVNLEDP 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + + +PD V++ AA + CE + A IN +S+ ++ +LLI
Sbjct: 53 SQLTQL-FRDIKPDAVIHTAAYTDVDGCELHRERAYRINFLASMT--VARLAARHGSLLI 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC--SNFAILRSSIIYGPQT 182
++STD V++G K Y+EE+ P+N YG SK+ E N ++R S +YG
Sbjct: 110 YVSTDYVFDGDKGMYREEEAPNPINYYGLSKLLGEVATLSAMDKENVLVVRVSGLYG--- 166
Query: 183 ISPVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYV----RDVVKI-------ILALTN 230
SP K + I ++ +L +GE+V F+D+ P Y R ++ + +L L
Sbjct: 167 YSPTGKRNFGINVLEKLL-RGEEVRAFYDQYLSPTYTYFLSRRLIDVLEREIRGVLHLAG 225
Query: 231 RWLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYK 288
LS + QL+ V G D + + M E + + P D S+D T + + L ++ + +
Sbjct: 226 ERLSRLEFAQLIAKVLGADAELIKPISMKEANLPARRPRDSSLDTT-MAKKLGLELPSQE 284
Query: 289 DGVK 292
+ VK
Sbjct: 285 ESVK 288
>gi|114045934|ref|YP_736484.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7]
gi|113887376|gb|ABI41427.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7]
Length = 306
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 139/312 (44%), Gaps = 37/312 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S +A H DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSRA------EAGIHRL-----DLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ + + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEVAKTHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ E PVN YG SK+ E + + FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAEPNPVNFYGASKLQGETCVLSTDNGFAVLRLPILYGE--VTQ 164
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-----------S 234
+ +S + I+ +L G H R P D+ I L R L S
Sbjct: 165 LNESAVLVLINQLL-DGRPQRVDHWAIRAPTSTADIANAIAKLIQRQLHAADVSGIYHFS 223
Query: 235 EDKQM---QLLLNVG---GPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYK 288
+ M Q+LL++G G D + + P D ++ +L + +K
Sbjct: 224 ATQTMTKYQMLLSLGELLGIDSAHLLPDQTPTDSAKRPQDCTLSCGRLAALGIYSELAFK 283
Query: 289 DGVKLTLAAEAT 300
G+ L+ +T
Sbjct: 284 TGLTQALSQSST 295
>gi|448331200|ref|ZP_21520467.1| dTDP-4-dehydrorhamnose reductase [Natrinema versiforme JCM 10478]
gi|445609671|gb|ELY63465.1| dTDP-4-dehydrorhamnose reductase [Natrinema versiforme JCM 10478]
Length = 297
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 30/302 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLVVG G LG L+ E + DV T+HST P + H D++
Sbjct: 3 VLVVGSGGLLGSALVARCLE---RSIDVVGTYHSTA-PAFDIPLEQH-------DIRETD 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
F + L QPD VVNCAA++ CE+D ++A ++N + ++S ++ +H
Sbjct: 52 AFRTI-LDDHQPDTVVNCAAMTDVDGCESDREAAFAVN--GTAPGEIASCCAVRDVPFVH 108
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G S Y E P+ VYG+SK+A E+ + + + R S +YG + +
Sbjct: 109 VSTDYVFDGNASEPYDETASTDPIQVYGESKLAGEEAVQGVDGDILVARLSFVYGVRGDT 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS---------- 234
P W+ + L+ G+ V F D+ P IL L
Sbjct: 169 NNLIGFPA-WVRNTLADGDDVPLFVDQHLTPTRAGQAADTILELHEAGAEGLYHVACRSC 227
Query: 235 ----EDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 290
E L + Q A+V R + P+ +D+T + + L T +D
Sbjct: 228 VTPYEFGHEIARLQDADDTLIDESQQADVQRDAERPSYTCLDVTAVEEELGRRQPTLEDD 287
Query: 291 VK 292
++
Sbjct: 288 LR 289
>gi|448636948|ref|ZP_21675396.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
gi|445765254|gb|EMA16393.1| dTDP-4-dehydrorhamnose reductase [Haloarcula sinaiiensis ATCC
33800]
Length = 292
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 26/230 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG +G LG ++ ++ V A H P D H +D+ S
Sbjct: 2 QILVVGASGLLGGNVTS--VALDRNETVVTAYHSEDPG----FDCPSHQ-----IDITSS 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS-LVNWLSSFTENKENLL 123
+ D + ++ PD +VNCAA++ CE D + A ++N + V W + ++ + L
Sbjct: 51 AAVDDLVIEV-DPDAIVNCAAMTDVDGCETDREQAYAVNADGAEHVAWAA---DSVDAAL 106
Query: 124 IHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ- 181
+H STD V+ G ++ Y E E AP VYG+SK+A E+ + E + I R S +YG
Sbjct: 107 VHTSTDYVFSGEETDRYPETAEPAPKQVYGESKLAGERHVRETHPDPLITRLSFVYGRSL 166
Query: 182 ---TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+IS P W+ KG+++ F D+ P Y + VK +L L
Sbjct: 167 PDGSISGFPA-----WVLEKARKGDEIPLFTDQRVSPSYAKPTVKTLLDL 211
>gi|383934825|ref|ZP_09988264.1| spore coat polysaccharide biosynthesis protein spsK [Rheinheimera
nanhaiensis E407-8]
gi|383703956|dbj|GAB58355.1| spore coat polysaccharide biosynthesis protein spsK [Rheinheimera
nanhaiensis E407-8]
Length = 291
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV+NCAA + + + + + IN ++ V L+ + LL+ STD V+ G
Sbjct: 51 QPDVVINCAAYTKVALAQQQAELCLQIN--TNAVVHLAQLCAKAQCLLVQFSTDYVFNGE 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y E D AP+NVYG+SK+ AE+ I + C + I R+S ++ + L
Sbjct: 109 KGSAYIETDSTAPLNVYGQSKLLAEQAIQQHCQRYLIFRTSWLFSQYGHNFYRTML---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
++ KG + DE CP Y DV +L + ++ DK
Sbjct: 165 --TLAEKGTAISVVDDETGCPTYAGDVADAVLKVLAQYNQSDK 205
>gi|313114188|ref|ZP_07799740.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623597|gb|EFQ07000.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 280
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G++G +LQ + +GK Y+ L ALP F + +
Sbjct: 2 KKILITGAGGFVGSRILQ---QWQGK-YE--------------LCALPKGFFCTADEALT 43
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A+ PDV+++ AALS C P A NV L WL+ + + L
Sbjct: 44 RAQVEAL-----HPDVILHTAALSDTSYCAQHPAEAYRANV--ELPVWLARAAQQTKAKL 96
Query: 124 IHLSTDQVYEGVKSFYKEEDEIA--PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-P 180
+ S+DQVY GV+ + +A P N+YG+ K+ AE+ + E C + LR+S +Y P
Sbjct: 97 VAFSSDQVYAGVQQQGPLPETLALHPANIYGQYKLKAEQRVLELCPDSVHLRASWMYDLP 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
P+ +LP+ + + L KGE + F ++ R YVR V++
Sbjct: 157 GYGLPIRGNLPLNLLRAAL-KGEALRFSRNDHRGVTYVRQVIE 198
>gi|348539164|ref|XP_003457059.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Oreochromis niloticus]
Length = 325
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 21/254 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G TG LG+ + + E + V T + P+LL DL
Sbjct: 19 RVLVTGATGLLGRAVCR---EFHSAGWTVIGTGYRRARPRLL-----------RCDLTDE 64
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ +PDV+V+CAA P V E ++A+++NV ++ + L+ L +
Sbjct: 65 DAVRGLLHEY-KPDVIVHCAAERRPDVMERHTEAAVNLNVHAT--STLAKEAATCGALFL 121
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G Y E+D P+NVYG+SK+ E+ C +LR +++G +
Sbjct: 122 YISTDYVFDGRNPPYGEDDSPNPLNVYGRSKLEGERETLRHCPGAVVLRVPVLFG--EVE 179
Query: 185 PVPKSLPIQ-WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S+ ++ + E H R P RDV + L+ R +D ++ +
Sbjct: 180 SVTESVVTSLYLKVQEASEESCTLDHVLQRFPTDARDVAAVCRKLSER-ARQDPSIRGIF 238
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 239 HFSGKEQMTKYEMA 252
>gi|337286096|ref|YP_004625569.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfatator indicus DSM
15286]
gi|335358924|gb|AEH44605.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfatator indicus DSM
15286]
Length = 279
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV+NCAA ++ E P AM +N + N L + L+H STD V++G
Sbjct: 52 RPDVVINCAAYNLVDRAEEFPWEAMRVNF-GGVCN-LVYACRTYNSFLVHYSTDYVFDGE 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y EED+ P+N YGKSK+ E FI + N+ I R+S +YG + + K + QW
Sbjct: 110 KEGLYTEEDDTNPLNNYGKSKLYGENFIRDNLENYLIFRTSWVYGEGKQNFLYKLM--QW 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ K E + DE P R +V++ L + L K + L+N G R
Sbjct: 168 AE----KQEYLRIACDEFSVPTSTRTIVEVTLKALDTGL---KGLYHLVNSGYASRYEWA 220
Query: 255 Q----------------MAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
+ A+ D + P +M +++ + LNI+ +++
Sbjct: 221 KAFFKIKGIKKFIYPASQADFDLPAKRPRFSAMSNSRICKKLNIEIADWRE 271
>gi|373951167|ref|ZP_09611128.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183]
gi|386323014|ref|YP_006019131.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175]
gi|333817159|gb|AEG09825.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175]
gi|373887767|gb|EHQ16659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183]
Length = 304
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 116/222 (52%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S +++ N LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSERNPQAALALNLTASQALAMAAKANNA--WLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAVTHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVLS-KGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ + + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIERRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|373457577|ref|ZP_09549344.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
gi|371719241|gb|EHO41012.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
Length = 301
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 24/254 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP--HSFVFFDVDLKS 63
++VVG G LGQ+L++ + K AA+ P P H + + +D+ +
Sbjct: 4 LIVVGANGLLGQNLIKRFRK---KHQIFAASVEEQPF-------FPADHVYSYTQLDITN 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
L+ +PD+V+N AA + CE P+ S+NV V +L + + +
Sbjct: 54 RVAVIDF-LQTIKPDIVINTAAFTNVDACEEQPEHCWSVNVRG--VEYLVDASRSFNPIF 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IH+STD V++G Y EEDE P Y +SK+AAE + + I R+ +++G +
Sbjct: 111 IHVSTDYVFDGENGPYSEEDEPNPRGNYARSKLAAEHVVENSNLEYIIARTQVLFG---V 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ + + W+ L+ +K+ D+ P Y D + I L R + L
Sbjct: 168 ANGVRHNFVTWVIEQLTNNKKIRIVDDQIGTPTYAPDFCEAIDRLLER------EAFGLF 221
Query: 244 NVGGPDRVSRVQMA 257
+V G + +SR A
Sbjct: 222 HVSGAEIISRYDFA 235
>gi|152998986|ref|YP_001364667.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185]
gi|151363604|gb|ABS06604.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185]
Length = 304
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 115/222 (51%), Gaps = 22/222 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G TG LG+ +++ L E+ G ++V AT S S +DL +
Sbjct: 3 KIMVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRA-----------SERVHKLDLTAP 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A + QP V+V+CAA P V E +P +A+++N+ +S L+ + LI
Sbjct: 49 LAVEAFIAR-EQPQVIVHCAAERRPDVSEQNPQAALALNLTAS--QALAMAVKANNAWLI 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y E+ PVN YG+SK+ E+ + ++FA+LR I+YG +
Sbjct: 106 YISTDYVFDGTQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYG--QVE 163
Query: 185 PVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKII 225
+ +S + ++ ++ + + V+ H R P D+ + I
Sbjct: 164 KLSESAVLVLVNQLIDRRAQGVD--HWAVRSPTSTADIAQAI 203
>gi|254443027|ref|ZP_05056503.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
gi|198257335|gb|EDY81643.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae
bacterium DG1235]
Length = 305
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 35/303 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G +G LG + + + V HH P P L +DL
Sbjct: 2 KILLTGASGLLGSAFARSAKR---RGHQVIGIHHQNPAPSSDLAQT------RTLDLTDL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +A+ L+ PD +VNCAA+S P CE P + +NV +L L+ + LI
Sbjct: 53 NALEALTLEHF-PDAIVNCAAISEPSACEAKPTHSRLVNV--ALPEKLALLARHLFATLI 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYG--PQ 181
H+S++QV++G Y + +P N Y + K+ +E ++E + FA LR ++ G P
Sbjct: 110 HISSEQVFDGTAHIYHRDSPPSPPNEYARQKLDSELRVHELAAEFATTLRLPLLIGNSPT 169
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------WL 233
+ + L W + G+ F DE R P + ++ L R W
Sbjct: 170 GTRSLHERLFASW-----AAGQPTPLFTDEYRQPCLADNAADAMVELCERNDLKGVYSWA 224
Query: 234 SEDK------QMQLLLNVGGPDR-VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
+ ++L + G P+ + Q + R A +S D+ L L P
Sbjct: 225 GQKTLSRYEIGQRILKHFGLPETLIQAAQRGDDPRFAHRQARLSFDLAPLASKLKTQPQG 284
Query: 287 YKD 289
D
Sbjct: 285 LSD 287
>gi|255654310|ref|ZP_05399719.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-23m63]
gi|296452600|ref|ZP_06894294.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP08]
gi|296880988|ref|ZP_06904934.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP07]
gi|296258561|gb|EFH05462.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP08]
gi|296428009|gb|EFH13910.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile
NAP07]
Length = 290
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ + A + D D+ +
Sbjct: 2 KILITGSNGQLGKELVNQLE----------AINQSMSQPKYAILATTRN----DFDIYNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDVVVNCAA + CE++ ++A +N V L+ +E LI
Sbjct: 48 TNVDNFILN-NKPDVVVNCAAYTKVDACEDNIETAYKVNALG--VRNLAIASEKVNAKLI 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+E+ + P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDSKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYGNGN- 163
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILAL 228
++ +++ + ++V +D+ P D+ KII+ +
Sbjct: 164 ---------NFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLTKIIIRI 202
>gi|254973883|ref|ZP_05270355.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-66c26]
gi|255091268|ref|ZP_05320746.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile CIP 107932]
gi|255312927|ref|ZP_05354510.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-76w55]
gi|255515686|ref|ZP_05383362.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-97b34]
gi|255648780|ref|ZP_05395682.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium
difficile QCD-37x79]
gi|260682000|ref|YP_003213285.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196]
gi|260685598|ref|YP_003216731.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291]
gi|306518897|ref|ZP_07405244.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile QCD-32g58]
gi|384359554|ref|YP_006197406.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile BI1]
gi|260208163|emb|CBA60476.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196]
gi|260211614|emb|CBE01844.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291]
Length = 290
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG+ L+ L A + S P+ ++ A + D+D+ +
Sbjct: 2 KILITGSNGQLGKELVSQLE----------AINQSINQPKYVILATTRN----DLDISNQ 47
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ D L +PDV+VNCAA + CE++ + A IN V L+ +E L+
Sbjct: 48 TNIDNFILH-NKPDVIVNCAAYTKVDACEDNIEIAYKINALG--VRNLAIASEKVNAKLV 104
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+E+++ P +VYGKSK+ EKF+ + + ILR++ +YG
Sbjct: 105 HISTDYVFNGFSKYPYREDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYGNGN- 163
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVVKIILAL 228
++ +++ + ++V +D+ P D+ KII+ +
Sbjct: 164 ---------NFVKTMIKLSLENKEVNVVNDQFGTPTSTVDLAKIIIRI 202
>gi|148222444|ref|NP_001089523.1| methionine adenosyltransferase 2 subunit beta [Xenopus laevis]
gi|82249356|sp|Q4QQZ4.1|MAT2B_XENLA RecName: Full=Methionine adenosyltransferase 2 subunit beta;
AltName: Full=Methionine adenosyltransferase II beta;
Short=MAT II beta
gi|67678004|gb|AAH97788.1| MGC115498 protein [Xenopus laevis]
Length = 334
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 20/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R L+ G TG LG+ + + E + + V +S P+ F ++L
Sbjct: 29 RRALITGATGLLGRAVYK---EFKENSWHVLGCGYSRARPR-----------FECLNLLD 74
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ F +P V+++CAA P + E+ P+ A +NV +S L+ L
Sbjct: 75 EAAVKALIQDF-KPHVIIHCAAERRPDIVESQPELASLLNVVAS--ENLAKVAAGVGAFL 131
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++S+D V++G Y+E+ P+N+YGK+K+ E+ + + A+LR ++YG +
Sbjct: 132 IYVSSDYVFDGTSPPYREDSIPHPLNLYGKTKLDGERAVLQNNEGAAVLRVPVMYG--DV 189
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S D V + H + R P +V+DV + L LT R + +D ++ +
Sbjct: 190 EKLSESAVTILFDKVQFSNKSANLDHCQQRFPTHVKDVATVCLQLTERKI-QDPSIKGIY 248
Query: 244 NVGGPDRVSRVQMA 257
+ G +++++ ++A
Sbjct: 249 HWSGNEQMTKYEIA 262
>gi|170724953|ref|YP_001758979.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908]
gi|169810300|gb|ACA84884.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908]
Length = 327
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 16/175 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV++ G TG LG+ +++ L + + + + AT S + +DL
Sbjct: 24 RVMITGSTGLLGRAVVKQLKQTD--EHLLIATGFSRA-----------ETGIYKLDLTDE 70
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ QPDV+++CAA P + E P++A+++N+ ++ L+ + + LI
Sbjct: 71 EAISEF-IGVHQPDVIIHCAAERRPDISEQSPEAALALNLGAT--GALAKAAKQQGTWLI 127
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++STD V++G + Y E D+ PVN YG+SK+ E+ + S+FA+LR I+YG
Sbjct: 128 YISTDYVFDGTEPSYSEADKPNPVNFYGESKLQGEQALLATASDFAVLRLPILYG 182
>gi|167622550|ref|YP_001672844.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
gi|167352572|gb|ABZ75185.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
Length = 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 16/175 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G +G LG+ L++ L + + A +S P + +DL
Sbjct: 6 KIMVTGASGLLGRALIKQLGQ--NSQQQIIACGYSRFGPNI-----------ERLDLTQA 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + K +PD++++CAA P V E DP +A+++N S +L+ L+
Sbjct: 53 AQVSSFVAKH-KPDIILHCAAERRPDVSEQDPQAALALN--SEATQFLTQAASQHGAWLL 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++STD V++G +S Y+E+ E PVN YG+SK+ E + + FAILR I+YG
Sbjct: 110 YISTDYVFDGSQSPYREDAETNPVNFYGQSKLKGELVVSDAQQGFAILRLPILYG 164
>gi|294055959|ref|YP_003549617.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM
45221]
gi|293615292|gb|ADE55447.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM
45221]
Length = 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 43/302 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD--VDLK 62
++LV G TG LG L + + +++ A HS + H V + +D
Sbjct: 2 KILVTGATGLLGNAYLDAATR---RSHELIALSHS--------QVVQHPAVVRNEQIDGT 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A+ L+ PDV+VNCAA+S P + +P A INV +L L+ + +
Sbjct: 51 DLDSLTALCLEI-WPDVIVNCAAISNPASVDANPQLAEKINV--ALPRHLAQISTHLGAR 107
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGP 180
L+H+STD V++G + Y+ D P ++YG++K+ AE+ + E S + +LR I+ G
Sbjct: 108 LLHISTDMVFDGHSAEAYRSTDMPCPTSLYGQTKLMAEREVLEHNSEDPVVLRIPILMGN 167
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
SP + + + + KGE+ + F DE R P +V +++ LSE + +
Sbjct: 168 ---SPSGARSLHEKLFAAIRKGERPKLFCDEIRQPCSAGNVADVLVE-----LSERRDLH 219
Query: 241 LLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLV--------------QTLNIDPVT 286
+ + G + +SR E+ + + D+ +D+ + V T N+DP+
Sbjct: 220 GIFHWAGNEALSRF---EIGQRILKHFDLPLDMVESVVKGDNPDFANRPSNLTFNLDPIV 276
Query: 287 YK 288
K
Sbjct: 277 GK 278
>gi|423063931|ref|ZP_17052721.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|406714595|gb|EKD09757.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 291
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+VG +G +G HL+ + + ++V T+H P L D D
Sbjct: 3 ILIVGASGLVGSHLVMACQQ---RGWNVVGTYHQFEQPHL------KPLKITDADAVQA- 52
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ QP VV A S CE +P+ INV SL N S E L+ +
Sbjct: 53 -----LIRETQPQVVFLPAFRSNVDYCEQNPEETYQINVVGSL-NVAKSCKEVDAKLVFY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
S+D V+ G Y+E DE P+ VYG+ K+ E+ I + +N+ ILR +++YG +
Sbjct: 107 -SSDYVFNGEAGPYREVDEPEPICVYGRQKLEVEQQIAQLMTNYLILRVTVVYGHEAQG- 164
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
K+ I+ I S L G+ + D+ P V D+ + L ++ L +V
Sbjct: 165 --KNFLIRLI-STLQNGQMIRVPEDQVGSPTLVDDIAEASCRLIEAGVTG------LFHV 215
Query: 246 GGPDRVSRVQM--------------------AEVDRGVQSPADISMDITKLVQTLN 281
GPD +SR + +E+++ + P M +LV+T+N
Sbjct: 216 AGPDVMSRYEFSLTVAELLGLERDNILPVITSELEQLAKRPLKAGMVCDRLVETIN 271
>gi|336122430|ref|YP_004577205.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis
IH1]
gi|334856951|gb|AEH07427.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis
IH1]
Length = 304
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA++ +CE + + A N + V ++ + L H+STD V++G
Sbjct: 69 NPDFVVNTAAITNVDLCETEREVAYKTNALA--VKYVGEACKKLNIPLCHISTDYVFDGE 126
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D I P+N YG +K EK + E + +I+R S+ P ISP+ + + W
Sbjct: 127 KGDYIENDRINPINYYGWTKAEGEKILNELNHDLTSIVRISV---PYCISPIKVNF-LMW 182
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ + L +G KV D+ P YV ++++ I+ + +K++ LL+ GG ++VSR
Sbjct: 183 VLNTLKEGNKVNAVIDQWNTPTYVPELMEGIVKI------HEKEVNGLLHFGGGEKVSRY 236
Query: 255 QMA 257
+ A
Sbjct: 237 EFA 239
>gi|117922141|ref|YP_871333.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3]
gi|117614473|gb|ABK49927.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3]
Length = 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S + L +DL +
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSRAEAGIHL-----------LDLTQAA 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + QP+V+V+CAA P V E P+ A+++N+ +S L+ + + L++
Sbjct: 50 EVEAFIAR-EQPEVIVHCAAERRPDVSERSPEHALALNLSAS--QTLAEVAKTHQAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ PVN YG+SK+ E + S FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAVPNPVNFYGESKLQGETCVLNTDSGFAVLRLPILYGE--VTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+ +S + I +L S+ ++V+ H R P D+ I L R L
Sbjct: 165 LSESAVLVLIKLLLDSRPQRVD--HWAIRAPTSTADIANAIAKLIQRQL 211
>gi|124007540|ref|ZP_01692245.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134]
gi|123987023|gb|EAY26779.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134]
Length = 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 35/243 (14%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN-----KENLLIHLSTDQ 130
+PD V++ AA++ CE D +NV S V +L + K L+HLSTD
Sbjct: 70 KPDAVIHTAAMTQVDDCETQRDLCWQLNVNS--VEYLIEACQQLKQAGKAPFLVHLSTDF 127
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+++G Y EE PV+ YG+SK+AAE+ + ++I R+ ++YG + +S
Sbjct: 128 IFDGAAGPYHEEATANPVSYYGESKLAAEQALLASNIQWSIARTVLVYG--ITEAMSRSN 185
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
I W+ L +G+ + +D+ R P D+ +L DK++ + N+ G D
Sbjct: 186 IILWVKKSLEEGKTIHVVNDQWRTPTLAEDLA------MGCFLMADKKISGIFNISGKDF 239
Query: 251 VSRVQMA--------------------EVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 290
++ +MA + + P + K +Q LN P ++ +G
Sbjct: 240 LTPYEMAIKTAKYFNLDASLIVKTDASRFSQPAKRPPKTGFILDKAIQQLNYAPRSFDEG 299
Query: 291 VKL 293
+ +
Sbjct: 300 IAI 302
>gi|149278594|ref|ZP_01884730.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
gi|149230589|gb|EDM35972.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
Length = 304
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LGQ + + L E + +A+ P + + + ++D+
Sbjct: 2 KTILVTGSNGLLGQKITERLLETQQFKL-IASAKGENRYP------VKEGYTYVEMDILD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ V ++ +PD +++ AA++ CE+ + A +NV + V L + E L
Sbjct: 55 PANVKEV-IETHKPDAIIHTAAMTNVDTCEDQKELAHELNVTA--VETLLANCEPHNIQL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+HLSTD +++G Y E P++ YG +K+ AE+ I +AILR+ I+YG +
Sbjct: 112 VHLSTDFIFDGADGPYDELAAPNPLSYYGITKLEAEEVIKNSKCRWAILRTIIVYG--IV 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S + +S + W L KG + +D+ R P D+ L L+ +
Sbjct: 170 SDMSRSNIVLWAKGALEKGNPINVVNDQWRMPTLADDLADCCL------LAVQHDAHGVF 223
Query: 244 NVGGPDRVS 252
N G D +S
Sbjct: 224 NASGKDMMS 232
>gi|150400814|ref|YP_001324580.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3]
gi|150013517|gb|ABR55968.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3]
Length = 305
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD VVN AA + +CE + + A N S V ++ + + L H+STD V++G
Sbjct: 65 NPDFVVNTAAFTNVDLCETEKEQAYKTNALS--VGYVGAPCKKLNIPLCHISTDYVFDGE 122
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTISPVPKSLPIQW 194
Y E DEI P+N YG +K EK + E + +I+R S+ P ISPV + W
Sbjct: 123 DGNYVENDEINPINYYGYTKAEGEKILNELNHDLTSIVRISV---PYCISPVKVNF-FMW 178
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ +L KGE + D+ P ++ ++V I+ + K L + GG ++VSR
Sbjct: 179 VLDMLKKGEDMNILIDQWNTPTFINELVDGIVII------HKKDASGLFHFGGGEKVSRY 232
Query: 255 QMA 257
+ A
Sbjct: 233 EFA 235
>gi|332293420|ref|YP_004432029.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter sp. 4H-3-7-5]
gi|332171506|gb|AEE20761.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter sp. 4H-3-7-5]
Length = 297
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 44/241 (18%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF---DVD 60
K+++V G G LG LL+ + HH+ ++F D+D
Sbjct: 13 KKIVVTGALGQLGMALLE------------QSKHHA-----------DFEYIFLSRKDLD 49
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S ++ L QPDVV+N AA + E+D D A IN + V +L+ + ++
Sbjct: 50 ITSRDNI-SIVLDKHQPDVVINTAAYTAVDAAEDDKDQAFLIN--EAAVGYLAEECKKRK 106
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFI-YEKCSNFAILRSSIIY 178
LIH+STD V++G KS Y E D+ P VYG SK+ E+ I + +AI+R+S +Y
Sbjct: 107 CALIHISTDYVFDGDKSTAYVESDKPNPQTVYGASKLGGEQLIEASNITKYAIIRTSWVY 166
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++ ++L GE ++ +D+ CP + D+ IL + R L E
Sbjct: 167 SV---------YGHNFVKTMLRLGEERGQLSVVNDQLGCPTWANDLADTILTVA-RELKE 216
Query: 236 D 236
D
Sbjct: 217 D 217
>gi|379335378|gb|AFD03360.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium W5-47b]
Length = 295
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 31/263 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+K L+ GG+G LGQ+L +E D T ++ + F D
Sbjct: 1 MSRK-FLITGGSGLLGQYL-----NVEAAKEDDILTIYNNNVGNC------SEFKSTKAD 48
Query: 61 LKSGSGFDAVALKFG--QPDVVVNCAALS--VPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ + F+ + F +PDVV++ AA++ +P +N P ++NV ++ ++
Sbjct: 49 I---TNFNMMKEIFSSSKPDVVIHTAAVTNPIPLRGQN-PKDVYNVNVNAT--KNIADLC 102
Query: 117 ENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ + LI++STD VY G + S KEE ++ PV++Y ++K+ E + E N+ ILR++
Sbjct: 103 KQFDAKLIYISTDLVYAGYRGSMLKEEAKLIPVSLYAETKLMGEMKVIETLENYLILRTA 162
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++YG + L G V+ F D+ R P++++D +I + + ++
Sbjct: 163 LLYG---FGLNHSRCHFHKMTEELKNGNPVKLFVDQFRTPIFLQDAAEITIKIAQMDINS 219
Query: 236 DKQMQLLLNVGGPDRVSRVQMAE 258
+ +N+GG +RVSR ++ +
Sbjct: 220 ET-----INLGGVERVSRYELGK 237
>gi|442610607|ref|ZP_21025318.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441747824|emb|CCQ11380.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 295
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G TG LG+ L ++ G + + +S L + +DL
Sbjct: 3 ILITGATGLLGRCLYSTMNTKLGTEHKIIGVGYSRAKAPL-----------YSLDLGKED 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + QPDVV++ AA P VCE DP++ ++NV ++ + L+ L
Sbjct: 52 ALKAF-FETHQPDVVIHAAAERKPDVCEQDPEATRALNVDTT--DRLARLASQHNAKLFF 108
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G + Y E DE + VN YG+SK AE + N A++R ++YG +
Sbjct: 109 ISTDYVFDGKHAPYTENDEHSAVNFYGRSKSMAEAKVLASDKNHAVVRVPVLYG--DVET 166
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILAL 228
+ +S VLS + HD R P +V D+ ++ L
Sbjct: 167 LSESAVTIIAKHVLSDNQSA---HDNWAIRYPTHVEDIALTLIDL 208
>gi|119357789|ref|YP_912433.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM
266]
gi|119355138|gb|ABL66009.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM
266]
Length = 290
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 30/227 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GG G LG L + P LP D+D+ +
Sbjct: 3 ILVTGGNGQLGSEL--------------RSLQRDYPAWMFCFCDLP------DLDITDSN 42
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DA+ ++ + +V+VNCAA + E +P A +N + V L++ + LLIH
Sbjct: 43 AVDAL-MRTCKCNVIVNCAAYTAVDQAEQEPGRAYRVNRDGAGV--LAACAKAHHALLIH 99
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G Y+E D AP+ +YGKSK AAE+ I+E +F ILR+S +Y +
Sbjct: 100 ISTDYVFDGNSCLPYRETDRPAPLGIYGKSKRAAEELIFEIAPSFLILRTSWLYSLYGHN 159
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ L + ++ + ++ D+ P Y D+ + I+ + +
Sbjct: 160 FLKTMLRLG------AEKDVIKVIFDQTGTPTYAGDLARAIMTILGK 200
>gi|148508211|gb|ABQ75999.1| predicted dTDP-4-dehydrorhamnose reductase [uncultured
haloarchaeon]
Length = 290
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 31/254 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++GG+G +G +++Q E E +V ATH+++P + +D
Sbjct: 2 RLLIIGGSGLVGSNIVQ---EAETNDIEVYATHNTSP----------SEYTEISLDKTDQ 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+A + PDV+++ AA CE + + A ++N + +++ + I
Sbjct: 49 ERTKAIAEEV-DPDVIIDTAAYHAVDDCETNREHAWTVNAAGTKNAAVAASSVGAH--YI 105
Query: 125 HLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+LSTD V+ G KS Y E+D ++PVN Y ++K A E+ S+ ILR S++YG
Sbjct: 106 YLSTDYVFLGNKSDTPYSEDDPVSPVNYYAETKYAGER-ASRIVSDATILRPSVVYG--- 161
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + W L GE++ +D+ Y D+ + +A+ + L+ L
Sbjct: 162 ---LAGNNFTTWALGELESGEEINIVNDQFSTTTYAPDLAQACVAVAKKGLTG------L 212
Query: 243 LNVGGPDRVSRVQM 256
+ GP R SR Q
Sbjct: 213 YHAAGPVRQSRFQF 226
>gi|448482200|ref|ZP_21605321.1| dTDP-4-dehydrorhamnose reductase [Halorubrum arcis JCM 13916]
gi|445821264|gb|EMA71056.1| dTDP-4-dehydrorhamnose reductase [Halorubrum arcis JCM 13916]
Length = 292
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ +D+ + + D + + PD ++NCAA++ CE DP+ A ++N + ++
Sbjct: 43 YQIDITASAAVDDLITEV-DPDAIINCAAMTDVDGCETDPERAHAVNADGA--ERVARAA 99
Query: 117 ENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
++ L+H STD V+ G ++ Y E E P VYG+SK+A E+ + + S+ I R S
Sbjct: 100 DSVNAALVHTSTDYVFNGEETALYSETAEPDPKQVYGESKLAGERRVRKTHSDPLIARLS 159
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG P W+ KG+ + F D+ P Y + K +L L L
Sbjct: 160 FVYGRSLPDGAISGFP-AWVLERARKGDNIPLFTDQRVSPSYAKSTAKTLLDL----LEA 214
Query: 236 DKQ----------------MQLLLNVGG--PDRVSRVQMAEVDRGVQSPADISMDITKLV 277
D++ +L+++ G ++ M++VDR + P +D T +
Sbjct: 215 DQEGTFNVPSRSCVTPYEFGELIVDEAGFADATLTESSMSDVDRDAERPQYTCLDTTAIE 274
Query: 278 QTLN 281
+ L+
Sbjct: 275 EALD 278
>gi|448416594|ref|ZP_21578834.1| RmlD substrate binding domain superfamily protein [Halosarcina
pallida JCM 14848]
gi|445678886|gb|ELZ31368.1| RmlD substrate binding domain superfamily protein [Halosarcina
pallida JCM 14848]
Length = 282
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 27/265 (10%)
Query: 32 DVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
DVA T+HST P + H D++ F+++ L+ +PD VVNCAA++
Sbjct: 11 DVAGTYHSTQ-PAFEFPLVQH-------DIRDTERFESM-LREHEPDAVVNCAAMTDVDG 61
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
CE+ P++A +N L+S +H+STD V++G Y E+ P+
Sbjct: 62 CESQPEAAFEVN--GDAPGALASICAEHSVPFVHVSTDYVFDGEAAEPYSEDATTNPIQE 119
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YGKSK+ E + E ++R S +YG + + P W+ L G++V F D
Sbjct: 120 YGKSKLEGEHQVREVDGETMLVRLSFVYGVRGDTDELVGFPA-WVRDTLDAGDEVPLFVD 178
Query: 211 ECRCPVYVRDVVKIILAL------------TNRWLSEDKQMQLLLNVGGPDR--VSRVQM 256
+ P + IL L + ++ + Q + +V G D V +
Sbjct: 179 QRITPSRAGHAAEAILELLDAEAYNCYHVASRSCVTPHEFGQAIADVQGADNTLVRESKQ 238
Query: 257 AEVDRGVQSPADISMDITKLVQTLN 281
A+V R P D ++++K+ L
Sbjct: 239 ADVSRDAARPQDTCLNVSKVEDALG 263
>gi|448737105|ref|ZP_21719157.1| dTDP-4-dehydrorhamnose reductase [Halococcus thailandensis JCM
13552]
gi|445804318|gb|EMA54575.1| dTDP-4-dehydrorhamnose reductase [Halococcus thailandensis JCM
13552]
Length = 301
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG G LG +++ ++ + ++ A T+H+T + D H ++D++
Sbjct: 2 QLLVVGANGLLGSNVI---AKALARDWECAGTYHAT---EPAFDVPLH-----ELDIRDT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F + L + D V+NCAA++ CE +P+ A ++N + L+ ++E
Sbjct: 51 DRFTTI-LDAHEFDAVLNCAAMTDVDGCERNPEHAHAVN--GAAPGELARVCADRELAFC 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL-RSSIIYGPQT 182
H+STD V++G + Y E +P VYG+SK+ E+ + EK + A+L R S IYG
Sbjct: 108 HVSTDYVFDGNAERRYTESAPTSPQQVYGESKLTGERTV-EKAHDGALLARLSFIYGTHG 166
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP 215
+ P W+ L KGE + F D+ P
Sbjct: 167 ATGTLTGFP-AWVSDQLRKGESIPLFADQTVTP 198
>gi|432900828|ref|XP_004076715.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Oryzias latipes]
Length = 326
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 22/255 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G TG LG+ + + E + + V T + P+ F D+
Sbjct: 19 KVLVTGATGLLGRAVCK---EFQSNGWSVIGTGYRRAQPR-----------FLRCDMTDE 64
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
++ L +PDV+V+CAA P V E ++A+ +NV ++ ++ L I
Sbjct: 65 DAVRSL-LHEHKPDVIVHCAAERRPDVMERHTEAAVHLNVHAT--GTVAKEAAVCGALFI 121
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G Y E+D PVNVYG+SK+ E+ C ILR +++G + S
Sbjct: 122 YISTDYVFDGRSPPYGEDDCPNPVNVYGRSKLEGERESLRHCPGAVILRVPVLFG-EVES 180
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
V ++ W+ V E D C R P RDV + L R +D ++ +
Sbjct: 181 VVESAVTALWL-KVEEADEDGCSALDHCLQRFPTDARDVAAVCRKLAERG-RQDPSIRGI 238
Query: 243 LNVGGPDRVSRVQMA 257
+ G +++++ +MA
Sbjct: 239 FHFSGKEQMTKYEMA 253
>gi|406863767|gb|EKD16814.1| RmlD substrate binding domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 644
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 31/269 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++ L+ G TG LG+ +++ E +DV T + P +L +DL S
Sbjct: 331 RKALITGATGLLGRQVVKAF---ERGGWDVKGTGFTRANPPTILK----------LDLGS 377
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A A++ +P VVV+CAA P C++DP ++NV +S L+ LL
Sbjct: 378 EADVSA-AIQELKPQVVVHCAANRFPDKCDSDPVGTRALNVEASAS--LARLCAASSTLL 434
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
I++STD V+ G++ + Y+ +P N YG +K EK + YEK +LR
Sbjct: 435 IYISTDYVFPGLEGDAPYEATSTPSPPNSYGLTKWDGEKAVLAEYEKAGKQGWGVVLRVP 494
Query: 176 IIYGPQTISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG +P ++ + +D+V KG+ V+ H R P DV +++ + +
Sbjct: 495 VLYG-NAGTPAESAVNVL-MDAVYKAQEKGQGVKMDHWAIRYPTNTEDVGRVLQDVATHY 552
Query: 233 LSEDKQMQL--LLNVGGPDRVSRVQMAEV 259
LS D + L +L D++++ ++ E+
Sbjct: 553 LSTDDKSSLPTILQFSSEDKMTKYEICEI 581
>gi|159898981|ref|YP_001545228.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159892020|gb|ABX05100.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 286
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 31/259 (11%)
Query: 5 RVLVVGGTGYLGQHL--LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
R+L+ G +GYLGQ + + I K Y + P P + DL
Sbjct: 3 RLLITGASGYLGQRVAYFAQQTTIWDKVY---SQTWRNP---------PTAGEHVACDLA 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTENKEN 121
+ +A+ L+ QP +++ AA++ P + D A+ ++NV +S L+ + +
Sbjct: 51 DQAQLEAL-LEQIQPTAIIHTAAVT-PAMGPAMTDQALWAVNVQASAT--LARWAAQHQV 106
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H+S+D V+ G ++ Y E D AP++ YG SK A E + AI R+S++YG
Sbjct: 107 RLVHVSSDAVWGGREAAYTESDVPAPIHPYGASKAAGEAVVAALDPQAAIARTSLLYGQN 166
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ P + + +GE+ F DE RCPV+V DV + ++ L++ +
Sbjct: 167 PLDPNTT------MALAMLRGERHGVLFTDELRCPVFVEDVAQALIE-----LAQKPSLY 215
Query: 241 LLLNVGGPDRVSRVQMAEV 259
+ ++ GP +SR ++ +
Sbjct: 216 GIFHLVGPQILSRFELGQA 234
>gi|255524618|ref|ZP_05391571.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|255511642|gb|EET87929.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
Length = 293
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 40/306 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ GG G LG L IE D+ L Q + DA + ++D+ +
Sbjct: 2 KLLITGGKGQLGCQLK---FIIEKNSSDIG------KLDQRIKDAECKFTDYNELDITNC 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ + F +PDV++NCAA + CEND D+A +N P +L + +E
Sbjct: 53 AEVISYVSSF-KPDVIINCAAYTNVDGCENDKDAAFKVNAIGPRNL----AIASEKYGIK 107
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H+STD V+ G + +KE D PV+VYGK+K+ E ++ E CSN+ I+R++ +YG
Sbjct: 108 LLHVSTDYVFNGEGTVPFKEYDVPNPVSVYGKTKLLGESYVREHCSNYFIVRTAWLYG-- 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA--LTNR-------- 231
K+ + S G V+ + P Y D+ IL LTN
Sbjct: 166 ---EYGKNFVYTIMKSAKENGH-VDVVDYQRGNPTYAEDLAHHILKIILTNEYGIYHCTG 221
Query: 232 -----WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
W D +++ G V+ + +V+R + PA S+D L TL +
Sbjct: 222 TGECSWY--DFACKIVEYSGIDCEVTPITPGKVNRLAKRPAYSSLDNMMLRVTLGDEMRP 279
Query: 287 YKDGVK 292
+K+ +K
Sbjct: 280 WKEALK 285
>gi|239788389|dbj|BAH70880.1| ACYPI005374 [Acyrthosiphon pisum]
Length = 300
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 20/239 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDV+V+CAA P E+DP +A +NV S L+ + L+++STD V+ G +
Sbjct: 60 PDVIVHCAAERFPDKVESDPQAAYDLNVGVSA--HLADVANHLNVPLLYISTDYVFNGDE 117
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-QTISPVPKSLPIQWI 195
S YKE DE +P+N YG+ K+ EK + N ILR ++YGP +++ + + +
Sbjct: 118 SPYKETDEPSPINEYGRLKLLGEKAVLAANLNNIILRIPVLYGPVESLEESAITYLLIGL 177
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR-- 253
+ E + + E R P V D+ I+ L + + + + G + ++
Sbjct: 178 KKCQNNNELFKVSNYELRNPSSVDDIAHIVFNLVEKKILSSNDISGIYQWCGKEMYTKYD 237
Query: 254 --VQMAEV-------------DRGVQSPADISMDITKLVQTLNIDPVTYKDGVKLTLAA 297
+MA++ GV+ P + +D++++ Q ++DG+K LA+
Sbjct: 238 MVAKMAKIFDMSMEQVVPVNGQSGVKRPFNTLLDVSRINQLGIGTHTNFEDGIKTVLAS 296
>gi|170290460|ref|YP_001737276.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174540|gb|ACB07593.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 302
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 26/254 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GGTG LG HL+ L+ + Y V ATHH P + +V+ D+
Sbjct: 3 ILVTGGTGLLGWHLVNKLA----RDYRVIATHHINRPPS---EDQRVEWVYLDL-----L 50
Query: 66 GFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
++ + G +P++V++ AA + CE D A +N ++ L+
Sbjct: 51 DYEGIKRIIGDLRPEIVIHTAAYTDVDGCEIDRKRAFDVNYLAT--KSLARACRGVCEYF 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G + Y EED P+N YG +K+ E + ++R+S IYG
Sbjct: 109 IYISTDYVFDGERGHYSEEDLPYPINYYGLTKLLGEVATTDLLDKSLVIRTSGIYG---C 165
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP K + LS+G++V F D+ P Y + IL L + ++ L
Sbjct: 166 SPGGKRGFALSLLEKLSRGDEVMAFTDQYLSPTYAPHLASNILKLL------ELRVNGFL 219
Query: 244 NVGGPDRVSRVQMA 257
++ G DR SR + A
Sbjct: 220 HIAG-DRASRYEFA 232
>gi|429859322|gb|ELA34110.1| nad dependent epimerase dehydratase family protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 317
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ K V+V G TG LG+ + + K ++V T +S + F VD
Sbjct: 1 MAGKDVVVTGATGLLGRQVARAFDR---KSWNVKGTGYSRA----------DNVSVFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L S G + L+ +P VVV+CAA P ++DPD+A ++NV ++ L+S +
Sbjct: 48 LGSPVGVEKF-LEESKPRVVVHCAAQRYPDKVDSDPDAARALNVAATKS--LASLCAARG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LI++STD V+ G ++ Y+ + + P N+YG++K+ E + E+ +L
Sbjct: 105 IFLIYISTDYVFSGKPGEAPYENDAQTGPTNLYGQTKLDGEHAMLEEYKQAGREGLGVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG Q +P + I +D++ + KV+ H R P DV ++ +
Sbjct: 165 RVPVLYG-QAETPAESATNI-LLDTLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDIA 222
Query: 230 NRWLSEDKQMQL--LLNVGGPDRVSRVQMAEVDRGVQSPADISMD 272
+++ D + +L DR+++ ++ + D+SMD
Sbjct: 223 VKYIEADDRSSFPKILQFSSEDRMTKYEICQT---FAEIMDLSMD 264
>gi|28896998|ref|NP_796603.1| dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD
2210633]
gi|153839167|ref|ZP_01991834.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ3810]
gi|260362308|ref|ZP_05775275.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
K5030]
gi|260897623|ref|ZP_05906119.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
Peru-466]
gi|260899554|ref|ZP_05907949.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ4037]
gi|28805206|dbj|BAC58487.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
RIMD 2210633]
gi|149747339|gb|EDM58317.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ3810]
gi|308087496|gb|EFO37191.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
Peru-466]
gi|308108746|gb|EFO46286.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
AQ4037]
gi|308111340|gb|EFO48880.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus
K5030]
Length = 290
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 42/313 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VL++G +G++G + L + K Y +A P ++ +D + F+V +
Sbjct: 2 KNVLLLGESGFVGSVVYNSLHCV-CKVYTIA------PNKKITIDNV------FEV---A 45
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F ++ + DVV+NC A++ CEN+ +N ++ V + + ++K+ L
Sbjct: 46 NDVFKSIEI--NNIDVVINCIAMANLDQCENNKLDCELVN--TTFVTHIVDYLKDKDIKL 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+S++ VY+G+ + Y E P+N YG K A+ +I +N+AI R +YGP+ I
Sbjct: 102 VHISSNAVYDGLNAPYSENSLREPINYYGICKSNADYYIESNLNNYAIARPITVYGPRKI 161
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL- 242
+ P+ +I + GE + D ++V D+ I L+ LS+ K + L
Sbjct: 162 E--QRDNPVSFIVKKILSGESFDLVDDNIVNMIHVEDLSNAIKKLS---LSDLKGVYNLS 216
Query: 243 --------------LNVGGPD--RVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
+ G D ++++V + + P + S D K+ LNI+P
Sbjct: 217 GDVSECRYDLGIRIAKIMGSDLNKINKVSGSNFKMAAKRPYNTSFDNKKMKSVLNIEPKN 276
Query: 287 YKDGVKLTLAAEA 299
+ L A+A
Sbjct: 277 IDIAISEILNAKA 289
>gi|340517615|gb|EGR47859.1| predicted protein [Trichoderma reesei QM6a]
Length = 327
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 57/327 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VLV G TG LG+ + G ++V + +S +D
Sbjct: 1 MAQRTVLVTGATGLLGREVAAAFRNSSG--WNVKGSGYSRA----------DGVDIIKLD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+SG+ A + +PDVVV+CAA P + DP++A ++N+ +S L+S T ++
Sbjct: 49 LESGADI-AKTIDEIRPDVVVHCAAQRFPDKVDKDPEAARTLNIAAS--KSLASVTAARD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
L+I++STD V+ G ++ Y+ + P N+YG++K+ EK + E+ + +L
Sbjct: 106 ILMIYISTDYVFPGRPGEAPYEADATPEPTNLYGQTKLDGEKAVREEYAIAGKEGLGVVL 165
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKI------I 225
R ++YG +T S ++ + + ++G K++ H R P DV ++ +
Sbjct: 166 RVPVLYGHAETPSESAVNVLMDSVWKAQTQGTKIKMDHWAIRYPTNTEDVGRVCHGKSRL 225
Query: 226 LALTN---RWL--SEDKQMQLLLNVGGPDRVSRVQMAEV--------------------- 259
+ L N ++L S+ K + +L DRV++ ++ +
Sbjct: 226 MLLYNVAVKYLDSSDRKHLPQILQFSSEDRVTKYEICQRFGDIMGLSIANIEPNTEGNDP 285
Query: 260 DRGVQSPADISMDITKLVQTLNIDPVT 286
+ VQ P D + T+ ++ LNID T
Sbjct: 286 NASVQRPYDCHLS-TRELKNLNIDVST 311
>gi|330834784|ref|YP_004409512.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4]
gi|329566923|gb|AEB95028.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4]
Length = 300
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDVV++ AAL+ CE D A +NV + ++ + +LL+++STD V++GV
Sbjct: 60 KPDVVIHAAALTNVDKCEEDKGLAKLLNV--DVTREIAKSSNQHGSLLVYVSTDYVFDGV 117
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
K Y+EEDE P+N YG +K+ E+ + E S+F I R+S YG S K W+
Sbjct: 118 KGNYREEDEPNPINFYGLTKLQGEREVMENSSSFIIARTSTPYGSNPAS--EKDNFALWL 175
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQLLLNVGGPDRVSR- 253
L EKV D+ P + AL + L E K+ ++++ +VSR
Sbjct: 176 IKKLKNNEKVNVVTDQITSP-----TLNTSFALMLKELIESYKRYNFIIHLTDASQVSRY 230
Query: 254 ---VQMAEV 259
V++AEV
Sbjct: 231 EFSVKLAEV 239
>gi|296242300|ref|YP_003649787.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM
11486]
gi|296094884|gb|ADG90835.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM
11486]
Length = 306
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 25/256 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV GGTG LG + + S K + V AT++ P L + ++L+
Sbjct: 10 RVLVTGGTGLLGYWIAETYSS---KGFKVYATYNEKNPPGL-------EAAWIKLNLEDP 59
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+V + +PD++V+ AA + CE + + A +N L + + + I
Sbjct: 60 ESIISVVREV-RPDIIVHSAAYTDVDGCEVNKEKAYRVNY---LGTEALARAGRETDYFI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
++STD V+ G K Y+EED APVN YG SK+ E + N I+R S +YG
Sbjct: 116 YVSTDYVFNGEKGLYREEDTPAPVNYYGLSKLLGEVAVRAILPKNSVIVRVSGLYG---Y 172
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
SP K + L +GE VE F D+ P Y R + +I+ L D + +L
Sbjct: 173 SPTGKKNFGVIVLERLLRGENVEAFIDQWLSPTYTRFLSEILAKLV------DTKPTGVL 226
Query: 244 NVGGPDRVSRVQMAEV 259
++ G +R+SR + A +
Sbjct: 227 HIAG-ERLSRYEFARL 241
>gi|87311330|ref|ZP_01093451.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645]
gi|87285910|gb|EAQ77823.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645]
Length = 348
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY-EGVKS 137
V+NC + CE DP A IN S V L + E + L+ LS D VY + +
Sbjct: 89 AVLNCGGCCALKSCELDPSMAWRINFES--VRNLLTVLEGSDTRLVQLSIDLVYSDKLGG 146
Query: 138 FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
Y E + PV +YGK+ AAE I + A+LR S+ P +S + I WI S
Sbjct: 147 GYLEHEPTDPVTIYGKTMAAAENLIQLERPESAVLRISL---PMGVSFNGHAGAIDWIQS 203
Query: 198 VLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
K + ++DE R P Y + ++I + R L+ + + GGP R+S Q+A
Sbjct: 204 RFMKNKPATLYYDEIRTPTYTDCMNRVIDDVLGRDLAG------IFHAGGPRRLSLYQIA 257
Query: 258 E------------------VDRGVQSP--ADISMDITKLVQTLNIDP 284
+ V+ G P D++MD TKL L +P
Sbjct: 258 QIINRVGDYNPHNLMGCMRVEAGPIPPRAGDVTMDSTKLADQLGYEP 304
>gi|320101334|ref|YP_004176926.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162]
gi|319753686|gb|ADV65444.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162]
Length = 298
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 24/254 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV GGTG LG + + E + Y+V A+HH + LD + + + D KS
Sbjct: 2 RILVTGGTGLLGLWVTKVFLE---RGYEVYASHHERK--PVGLDGVTWEQMNLE-DFKS- 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A +K +PD +++ AA + CE + A +N ++ + ++ L+
Sbjct: 55 ---VADTVKRVKPDAIIHTAAFTDVDGCEEKKELAYRVNYLATRI--IAETARELNAYLV 109
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
++STD V++G + Y+E D APVN YG +K+ E + I+R S +YG S
Sbjct: 110 YISTDYVFDGERGMYREFDAPAPVNYYGLTKLLGEVAVNTLAPRSLIVRVSGLYG---FS 166
Query: 185 PVPK-SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P K + + ++ +++ E+V+ FHD+ P YVR + + I + R ++ ++
Sbjct: 167 PTGKRNFGLVALEKLMNN-EQVDAFHDQYLSPTYVRPLAERIADMVKR------EVVGVI 219
Query: 244 NVGGPDRVSRVQMA 257
+V G +R SR + A
Sbjct: 220 HVAG-ERASRYEFA 232
>gi|427705639|ref|YP_007048016.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7107]
gi|427358144|gb|AFY40866.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7107]
Length = 291
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 51/313 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ G +G+LG HL Q L++ E + Y +H +P + + V+L
Sbjct: 2 RKLLITGASGFLGWHLCQ-LAKQEWEVYSTYNSHF-IEIPGIKI---------LKVNL-- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F + F + P V++ AA S P C+ P + INV S ++ +
Sbjct: 49 -TDFQELKQLFNEINPAAVIHTAAHSQPNFCQIYPQESHLINVTVSCN--IAGLCADYAI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+ STDQV+ G+ + Y E + P+N+YG+ KV AE + E+ A+ R +++G
Sbjct: 106 PCVFTSTDQVFNGLNAPYNEAVPVCPINIYGEQKVMAEMGMLERYPLTAVCRMPLLFGSA 165
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQ 240
T P +S IQ L + +++ F DE R P K ++LA+ +++
Sbjct: 166 T--PTAQSF-IQPFIQTLKEEKELNLFIDEYRTPASGTTTAKGLLLAV--------EKVN 214
Query: 241 LLLNVGGPDRVSRVQMAEV--------DRGVQS------------PADISMDITKLVQTL 280
++++GG +R+SR ++ G++S PAD+S+D ++ L
Sbjct: 215 GIIHLGGKERISRYDFGQLLVEVFKLPSTGIKSCRQKDVKMSAPRPADVSLDSSQAF-GL 273
Query: 281 NIDPVTYKDGVKL 293
P++ K+ +K+
Sbjct: 274 GYQPLSIKEELKI 286
>gi|410939649|ref|ZP_11371476.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira noguchii str.
2006001870]
gi|410785517|gb|EKR74481.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira noguchii str.
2006001870]
Length = 295
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 57/318 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +L+ G +G LG HL + E Y V A + L + +D + ++D
Sbjct: 1 MNSNTILITGASGLLGHHLSKFFLE---NGYKVIALRKAHSLGIVGIDEI-------EID 50
Query: 61 LKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L FD V L +P+ +++ A L+ CE + A I++ S V ++
Sbjct: 51 LLD---FDTVKNLLTKIRPNYIIHSAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQ 105
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G E+ + PVNVYGK+K +E + S ILR++ +
Sbjct: 106 INSKMIHISTDHLWDGTMQMVTEDVPVCPVNVYGKTKAESEHAVLAVNSEALILRTN-FF 164
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ E + F+D P+ + + ++IL+L
Sbjct: 165 GPGLQWRQSLS--------DWIINSLNRNESINTFYDVFFTPISIYHLARVILSLI---- 212
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDI 273
K+ + + + G +R+S+ A ++ P D+S+
Sbjct: 213 --QKKTKGIYHTVGSERISKYHFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLST 270
Query: 274 TKLVQTLNIDPVTYKDGV 291
K+V LN T + G+
Sbjct: 271 DKVVGFLNTSMPTIQAGI 288
>gi|297184077|gb|ADI20196.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 298
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L G G LGQ + ++ + AT + + A + +D+ +
Sbjct: 2 KILFTGSNGLLGQKI--AVATANYPQHSFLATSRGANRTKAMGTA-----TYASMDITNA 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V F +PDV+++ AA++ CE PD A +NV + N ++ E ++ +
Sbjct: 55 EDVSNVVGDF-EPDVIIHGAAMTHVDECELQPDQATLLNVEGTR-NIANAANEVGAHV-V 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD +++G YKE+ + P++ YG +K+ AE I + S ++ILR+ ++ G
Sbjct: 112 HISTDFIFDGKDGPYKEDAKAQPLSHYGWTKLEAEDIIKDLPS-WSILRTVLVIG--MAE 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + W L KG+ + D+ R P D+ + L L+ D+ Q + N
Sbjct: 169 DLSRSNIVLWAKGALEKGQPINVVDDQFRTPTLAEDLAQGAL------LAADQCAQGVFN 222
Query: 245 VGGPD--------------------RVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
+ GPD V+R +++ + P DI+K + L +P
Sbjct: 223 ISGPDFMSIYDLVGQVAAYFGLSMESVTRTDSTTLNQPAKRPPRTGFDISKARKELGYEP 282
Query: 285 VTYKDGVKL 293
T+ +++
Sbjct: 283 HTFNQALEI 291
>gi|255523732|ref|ZP_05390698.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|296186736|ref|ZP_06855138.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium
carboxidivorans P7]
gi|255512601|gb|EET88875.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7]
gi|296048773|gb|EFG88205.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium
carboxidivorans P7]
Length = 300
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%), Gaps = 17/225 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LG+ L S+ ++V + S + L D H FV D+
Sbjct: 5 KKILITGSNGMLGKDLTSLFSK--NDNFEVFGINRSNDIN--LKD--DHYFV---CDITD 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + LK+ P+++++CAA CE D + A +N S+ + LSS+ K
Sbjct: 56 FEELNNI-LKYINPEIIIHCAANVNVDGCEKDKNYAYKLNSESTKI--LSSYKSEKTKF- 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD ++ G YKE+D+ P+N Y SK E F + N I+R++ IYG
Sbjct: 112 IYISTDSIFNGETGNYKEDDKANPLNYYAFSKFEGENFALLQNKNAIIIRTN-IYGFH-- 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
P SL ++W L K+ F+D P+Y + KI++ L
Sbjct: 169 KPYGSSL-VEWALKNLKSENKISGFNDVYFNPIYTGQLGKIVMKL 212
>gi|402773069|ref|YP_006592606.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
gi|401775089|emb|CCJ07955.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
Length = 293
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VK 136
D +VN AA + E++PD AM +N + +++ + L+HLSTD V++G +
Sbjct: 53 DAIVNAAAYTQVDKAESEPDVAMRVN--GAGAGFVAETAAELKVPLLHLSTDYVFDGTLD 110
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+E+DE P YG+SK+ E+ I +C N ILR++ +Y P ++
Sbjct: 111 RPYREDDEPGPTGAYGRSKLEGERQIAARCENSVILRTAWVYSP---------FGANFVK 161
Query: 197 SVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGG----- 247
++LS GE ++ D+ P D+ +LA+ R + + D +++ + ++ G
Sbjct: 162 TMLSLGETRDEIGVVADQIGNPTNALDIADALLAIAERLVDDSDPRLRGVFHMTGQGEAS 221
Query: 248 ------------------PDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
P RV R+ A+ + PA+ +D KL + + ++D
Sbjct: 222 WADMADAIFAAAEKQGRKPVRVKRISTADYPTPARRPANSRLDNAKLDASYGVALPKWRD 281
Query: 290 GVKLTLA 296
V +A
Sbjct: 282 SVNACVA 288
>gi|358392298|gb|EHK41702.1| hypothetical protein TRIATDRAFT_31249 [Trichoderma atroviride IMI
206040]
Length = 319
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 25/270 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VLV G TG LG+ ++ + + V T HS VD
Sbjct: 1 MAERTVLVTGATGLLGREVVSAFKLLHSG-WAVKGTGHSRA----------DGVDILKVD 49
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+S A L +P VVV+CAA P + DP+ A ++N+ +S + L+S T ++
Sbjct: 50 LESAEDV-AKTLDETRPQVVVHCAAQRFPDKVDKDPEGARALNIAASKL--LASVTAARD 106
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
L+I++STD V+ G + Y+ + P N+YG++K+ E + E+ + +L
Sbjct: 107 ILMIYISTDYVFPGRPGDAPYEADATPGPTNLYGQTKLDGENAVLEEYAKAGKEGLGIVL 166
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G K++ H R P D+ +I + +
Sbjct: 167 RVPVLYGHAETPSESAVNVLMDSVWKAQTEGTKIKMDHWALRYPTNTEDIGRICHDVAVK 226
Query: 232 WL--SEDKQMQLLLNVGGPDRVSRVQMAEV 259
+L + K + +L D++++ ++ +
Sbjct: 227 YLESGDRKNLPRILQFSSEDKMTKYEICQT 256
>gi|373457587|ref|ZP_09549354.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
gi|371719251|gb|EHO41022.1| dTDP-4-dehydrorhamnose reductase [Caldithrix abyssi DSM 13497]
Length = 297
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDV----AATHHSTPLPQLLLDALPHSFVF 56
M KRVL+ G GY+ Q LLQ +P +V AA L +DAL
Sbjct: 1 MCVKRVLITGINGYISQFLLQT------RPENVEIIGAARRDDLSAHALNIDAL------ 48
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+DL AL G D V++ AA+S +C+ +P+ A+ +N ++ L+ +
Sbjct: 49 IKLDLSQAVQPQLNALS-GPVDAVIHTAAVSSLALCQKEPELALRVNAQAT--RELAHWC 105
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ LI+LSTD V++G Y E + P+N YG SK E + E NFAI R ++
Sbjct: 106 KTNGARLIYLSTDIVFKGDHPPYDENSKPEPINHYGLSKWQGEIAVQETMDNFAIGRIAL 165
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
P ++ I W L+ E + F DE R P Y ++ +
Sbjct: 166 ALAPGLNG--TRNF-IDWFLERLNNNETIPLFKDEIRTPTYTVELAR 209
>gi|149200332|ref|ZP_01877351.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155]
gi|149136568|gb|EDM25002.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155]
Length = 288
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 50/300 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K++VL+ G G+LG L LSE Y+V T+ ++ A S DL+
Sbjct: 2 KEKVLITGIHGFLGTELANVLSE----DYEVYGTYFNSS-------ATSSSHKTGRCDLR 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S +V L +P V + AALS P C+ + + IN +S LS +
Sbjct: 51 KLSEVKSV-LDRVRPSKVFHLAALSDPNTCDREAKLSEEINFLAS--RLLSELCAERGIK 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ STD V++G K Y EEDE+ P++ Y + K+ AE+ + + + +I R ++Y +
Sbjct: 108 LLFTSTDLVFDGRKGNYSEEDEVNPLSRYAEHKLMAEE-VMKGNDSASICRMPLMY---S 163
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +S+ + I L E+V F DE R +V K ++ +++ L L
Sbjct: 164 TADNKRSM-VYGIKEKLKNREQVGLFTDEYRSAAHVNCASKALMKVSSLELG-------L 215
Query: 243 LNVGGPDRVSRVQMA--------------------EVDRGVQSPADISMD----ITKLVQ 278
+++GGP R SR +M +V + PAD+S D I+K +Q
Sbjct: 216 VHLGGPLRESRYEMGLLIAEAFSLPKYFIKPCLQKDVKMAAERPADVSFDNSVAISKAIQ 275
>gi|209520653|ref|ZP_03269406.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160]
gi|209498936|gb|EDZ99038.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160]
Length = 307
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 18/229 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V+V+GG+G LG+ L L+ +G + + T S P Q++ +D++
Sbjct: 3 KVVVIGGSGLLGRALNDELARHDG--WQIVTTAFSRPSRQMVA-----------LDVRDS 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ +PD VV AA P VCE DP A ++NV + V ++ +
Sbjct: 50 LAVERF-IEHVKPDAVVIAAAERRPDVCERDPALARALNVDA--VRTIARAANRHGAWTL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G Y+ + AP+N YG+SK+ E+ + E +LR ++YGP
Sbjct: 107 SISTDYVFDGTHPPYRHDSTPAPLNAYGQSKLEGERALIETADRGCVLRLPLLYGPIVSW 166
Query: 185 P--VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
P SL S S G+ R P + DV +I + R
Sbjct: 167 PESAVTSLVPAIAASAASDGQTATMDAWAIRYPTFTPDVAVVIRQMLER 215
>gi|24375660|ref|NP_719703.1| dTDP-4-dehydrorhamnose reductase family [Shewanella oneidensis
MR-1]
gi|24350574|gb|AAN57147.1| dTDP-4-dehydrorhamnose reductase family [Shewanella oneidensis
MR-1]
Length = 306
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG+ +++ L+ + V AT S + +DL
Sbjct: 4 IMVTGATGLLGRAVVKQLT---AAGHRVIATGFSCAEANI-----------HKLDLTQAI 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+A + +P+V+V+CAA P V E P+ A+++N+ +S L+ + L++
Sbjct: 50 AVEAFIAR-ERPEVIVHCAAERRPDVSEQSPEQALALNLSAS--QTLAKAAKQHGAWLLY 106
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G Y E+ PVN YG+SK+ E + S FA+LR I+YG ++
Sbjct: 107 ISTDYVFDGTTPPYAEDAAPNPVNFYGESKLQGETCVLNTDSRFAVLRLPILYG--EVTQ 164
Query: 186 VPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S + I+ +L S+ ++V+ + R P D+ I L R L + + +
Sbjct: 165 LSESAVLVLINQLLDSRPQRVDAW--AIRSPTSTADIAGAIAKLIKRQLHAADVLG-IYH 221
Query: 245 VGGPDRVSRVQM 256
P +++ QM
Sbjct: 222 FSSPQTMTKYQM 233
>gi|219848619|ref|YP_002463052.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485]
gi|219542878|gb|ACL24616.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485]
Length = 473
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 49/290 (16%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
L+ GGTGYLG L++ + G P VA H TP P ++ +DL+ +
Sbjct: 191 LITGGTGYLGNTLIR-HARARGLPI-VATFHRQTPPPST-------DITWYPLDLRDPTA 241
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
+ + QP V+++ A + +PD M+I +++ LIH+
Sbjct: 242 VRRLITEV-QPAVIIHTA------FRQYEPD-LMAIT--GEGAGHVAAAAAEIGARLIHM 291
Query: 127 STDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
S+D +++G K+ Y E D P+ YG++K AE+ + + AI+R+S+IYG P
Sbjct: 292 SSDVIFDGEKAGAYTEADPPNPITDYGRAKARAEELVQHHHPHAAIVRTSLIYG---FDP 348
Query: 186 VPKSLPIQWIDSVLSKGEKVE-FFHDECRCPVYV---------------RDVVKIILALT 229
+ + +++GE+ E F+DE RCPV+V R V+ + A T
Sbjct: 349 LDRH---SAFALAVARGERTEKLFYDELRCPVFVDDLAAALLDLAQSDYRGVINLAGAET 405
Query: 230 NRWLSEDKQMQLLLNVGG--PDRVSRVQMAEVDRGVQSPADISMDITKLV 277
LS + +LL G PDR+ AE P + ++DI++ +
Sbjct: 406 ---LSRYEWGRLLAQAHGLDPDRIVGALSAESP--TPRPRNCALDISRAL 450
>gi|118588018|ref|ZP_01545428.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614]
gi|118439640|gb|EAV46271.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614]
Length = 296
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+++N AA + E D +A ++N L+ + ++LIH STD V++G +
Sbjct: 53 PDLIINTAAYTAVDRAETDSQAAFAVNRDGP--RNLAEAAQKHGSVLIHFSTDYVFDGSQ 110
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E+DE+ P+ VYG+SK A E I ILR+S +YG + V L +
Sbjct: 111 PHAYVEQDEVGPIGVYGESKEAGEAAIRAVTERHLILRTSWVYGVHGANFVRTMLRL--- 167
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ + +D+ CP Y D+ +++L L R L+
Sbjct: 168 ---AQERAHIRVVNDQSGCPTYAADLAEVVLRLAERVLN 203
>gi|427739287|ref|YP_007058831.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
gi|427374328|gb|AFY58284.1| dTDP-4-dehydrorhamnose reductase [Rivularia sp. PCC 7116]
Length = 294
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 35/231 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYD--VAATHHSTPLPQLLLDALPHSFVFFDVDL 61
K +L++G G +G L + L +PY +A L Q P +F
Sbjct: 3 KSILLIGCNGQIGTQLQKTL-----QPYGNVIAVARREAELTQ------PQTFEKL---- 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
++ QP +++N AA + E++P+ A +IN + + ++ +
Sbjct: 48 ----------IEQNQPQIIINAAAYTAVDKAESEPELANTINAIAPQL--MAQQAQQSGA 95
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LLIHLSTD V++G + Y+E+D P+++YGK+K+ AE+ I CS++ ILR++ +YG
Sbjct: 96 LLIHLSTDYVFDGKNNCPYQEDDATNPLSIYGKTKLLAEQAIRSTCSDYLILRTAWVYGC 155
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
S K++ + ++ +++ D+ P + +D+ + I AL ++
Sbjct: 156 GGKSNFVKTML-----RLGAQKSELKIVCDQIGSPTWAKDIAEAITALISK 201
>gi|329766671|ref|ZP_08258214.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329136926|gb|EGG41219.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 311
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 30/234 (12%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KK++ V+G +G LG ++ ++ Y+V T++ T + H V + L
Sbjct: 2 KKKICVIGASGLLGYKIIHSCND-----YEVFGTYNQT--------QINHDHVHL-IQLD 47
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S D + QPD +VN AA++ CE + A +NV + + +
Sbjct: 48 ITSPADCEKIIEIQPDYIVNTAAITNVDYCEKYKEKAHLVNVIGT--QNIVKIAKKLNCK 105
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--- 179
L+H+STD ++ G YKE+D PVN YG++K+ +E + + ++ ILR++++YG
Sbjct: 106 LVHISTDGIFSGNDLNYKEDDPPNPVNYYGQTKLESENAV-KTLDDYLILRTNVLYGYVS 164
Query: 180 -------PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
+ P+ L WI S L K +K+ +D+ P ++ KII+
Sbjct: 165 KNIIKSRSNYLKPINFGL---WILSELHKNKKIRIVNDQFSNPTLADNLAKIIM 215
>gi|406996384|gb|EKE14771.1| hypothetical protein ACD_12C00310G0004 [uncultured bacterium]
Length = 290
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 126/254 (49%), Gaps = 26/254 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G +G LG L+ + K Y V AT S P F F + DLK+
Sbjct: 2 KKILITGTSGMLGATLVN----LWNKKYHVYATSGSN------FSNNPAVF-FKEFDLKT 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ L++ +PDV+++CAA++ C+N+P AM +N S+ + F E+K L
Sbjct: 51 -RNYQSL-LQWVKPDVILHCAAITSHEYCQNNPKEAMLVN-GESVKKLIEVFPESK---L 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I +STD V+ E+ + P +YGKSK EK I N ++R++II + I
Sbjct: 105 IFISTDAVFPLNTHLAGEKTKTIPSTIYGKSKELGEKNILNLARNGYVIRTTII--GKNI 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S ++WI + L G+ + + + P+ + + + W+ +K + +L
Sbjct: 163 NTRKQSF-VEWIINSLRGGKMINLYDNTLFTPISIWHFAQEL-----EWIINNK-VPKIL 215
Query: 244 NVGGPDRVSRVQMA 257
+V G + +S+ +
Sbjct: 216 HVAGDEIISKYTLG 229
>gi|448729950|ref|ZP_21712262.1| dTDP-4-dehydrorhamnose reductase [Halococcus saccharolyticus DSM
5350]
gi|445794271|gb|EMA44824.1| dTDP-4-dehydrorhamnose reductase [Halococcus saccharolyticus DSM
5350]
Length = 304
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G +G +++ E + V T+ S P P L + S D+ +
Sbjct: 3 LLVLGAGGLVGSNVVTAAVARE---WSVTGTYRSEP-PTLDV-----SLTELDIRNRKRV 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ PD VVNCAAL+ CE +PD A ++N + L++ E +H
Sbjct: 54 ---RSVVRRTSPDAVVNCAALTDVDACEREPDRARTVNADAP--GALAAVCEEDAIPFVH 108
Query: 126 LSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G + Y E P+ YG+SK+A E+ + + ++R S +YG +
Sbjct: 109 LSTDYVFDGRADTRYDESATPNPIQEYGRSKLAGEQAVRRQHDTPLVVRLSFVYGIGRAN 168
Query: 185 P--VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
P V P W+ L GE V F D+ P K +L L
Sbjct: 169 PPGVVAGFP-AWVRDRLHAGESVPLFTDQRVTPTRAGQAAKTVLDL 213
>gi|384484132|gb|EIE76312.1| hypothetical protein RO3G_01016 [Rhizopus delemar RA 99-880]
Length = 283
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDV+V+CAA P V E D + +NV + L++ ++K +LI++STD V++G
Sbjct: 44 QPDVLVHCAAERRPDVAEKDQSGVLRLNVETP--RNLATICKSKGVMLIYISTDYVFDGT 101
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y+ +D+ P+ YG++K+ EK I E + ILR I+YG + +S I
Sbjct: 102 SPPYEVDDKPNPLQFYGQTKLDGEKVIREVYPDAVILRVPILYGATEYN--GESAVNVLI 159
Query: 196 DSVLSKG-EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
D+VLSK KV+ R P V DV +++ L + +++ + ++ + + + +++
Sbjct: 160 DTVLSKKVSKVDNVAQ--RYPTNVADVARVLKDLAVKKINDKQDIRGIYHFSAKESMTKY 217
Query: 255 QMAE 258
QM E
Sbjct: 218 QMCE 221
>gi|310829176|ref|YP_003961533.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
gi|308740910|gb|ADO38570.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
Length = 288
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ R+ + G G LG L + L E D+ T DVD
Sbjct: 2 LENDRIWITGAEGQLGHTLYKTL---EDAARDILTTDK-------------------DVD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ G A +PDV++NCAA++ + CE +P A +N + LS +
Sbjct: 40 VTDLDGIMQYA-DINRPDVIINCAAMADVKDCEEEPIQAYKVNALGA--RNLSIASRKIG 96
Query: 121 NLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+I +STD V+ G+ + Y E D PV VYGKSK+A E F+ E ++RSS IYG
Sbjct: 97 AKIIQISTDDVFGGMSQKTYTEFDTPEPVTVYGKSKLAGEGFVRELNPRHLVIRSSWIYG 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S + W+ + KGE E +D+ P ++ K I+ L
Sbjct: 157 QS------GSNFVFWVLEMARKGEPFEVPNDQVGSPTSAVELAKFIVRL 199
>gi|428314793|ref|YP_007150977.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
gi|428256176|gb|AFZ22133.1| dTDP-4-dehydrorhamnose reductase [Microcoleus sp. PCC 7113]
Length = 301
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 31/239 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+L+ G TG LGQ L + L+ + GK V ST VDL
Sbjct: 2 RRILLTGCTGQLGQELQRTLAPL-GK---VIGVDRST------------------VDLSQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ +PDV+VN AA + E + + A +IN + V ++ + L
Sbjct: 40 ETTIRQRLVEI-KPDVIVNAAAYTAVDKAETETELAQAINATAPKV--MAEEAQRLGATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K+ Y E+D P+ VYG++K+ E+ I + C+N ILR++ +YG
Sbjct: 97 IHVSTDYVFDGGKNTPYTEDDVTNPLGVYGRTKLEGEEGIRQTCTNHLILRTAWVYG--- 153
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ K ++ + + ++ E+V D+ P + D+ + I L ++ E Q+ +
Sbjct: 154 --SLGKVNFVKTMLRLFAEREEVRVVADQVGSPTWAADLAQAIATLLSQTNQEPGQLSI 210
>gi|455789097|gb|EMF41033.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 40/282 (14%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDV 59
S K++L+ G +G LG +L + + + H + + + ++ +D L F+ V
Sbjct: 3 SSKKILITGASGLLGHYLSNFFQTSRYQIFALKGKHSVNVSGVKEIEIDLLD----FYKV 58
Query: 60 -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL LK PD +++CA L+ CE + A I++ S + ++
Sbjct: 59 TDL----------LKKIHPDYIIHCAGLTNVDQCERNVVLAEKIHIDLSFL--VAKVAGQ 106
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G + E+ + P+NVYG++K AEK + S ILR++ +
Sbjct: 107 INSKIIHISTDHLWDGSEPMVIEDTPVCPLNVYGRTKAEAEKAVISVNSKALILRTN-FF 165
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ EK++ F D P+ + + ++L R +
Sbjct: 166 GPGLEWRQSLS--------DWIITSLNRNEKIKAFSDVFFTPISMFHLSNLML----RLI 213
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMA-EVDRGVQSPADISMDIT 274
+E+ + + +V G +R+S+ A + + + PAD+ I+
Sbjct: 214 TEEAKG--IYHVVGSERISKYDFAVSISKILNKPADLIQAIS 253
>gi|424874697|ref|ZP_18298359.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393170398|gb|EJC70445.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 295
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ E +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAV--AAAAARIEAPVIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ +R +++ + ++ +
Sbjct: 155 --FGTNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVADPEPSLRGIF 212
Query: 244 NVGGPDRVSRVQMAE 258
++ G S AE
Sbjct: 213 HLTGSGEASWADFAE 227
>gi|417759221|ref|ZP_12407258.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000624]
gi|417777161|ref|ZP_12424986.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000621]
gi|418670791|ref|ZP_13232153.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000623]
gi|409944696|gb|EKN90276.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000624]
gi|410573038|gb|EKQ36095.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000621]
gi|410582220|gb|EKQ50019.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira interrogans
str. 2002000623]
Length = 294
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 138/282 (48%), Gaps = 40/282 (14%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATH--HSTPLPQLLLDALPHSFVFFDV 59
S K++L+ G +G LG +L + + + H + + + ++ +D L F+ V
Sbjct: 3 SSKKILITGASGLLGHYLSNFFQTSRYQIFALKGKHSVNVSGVKEIEIDLLD----FYKV 58
Query: 60 -DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL LK PD +++CA L+ CE + A I++ S + ++
Sbjct: 59 TDL----------LKKIHPDYIIHCAGLTNVDQCERNVVLAEKIHIDLSFL--VAKVAGQ 106
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH+STD +++G + E+ + P+NVYG++K AEK + S ILR++ +
Sbjct: 107 INSKIIHISTDHLWDGSEPMVIEDTPVCPLNVYGRTKAEAEKAVISVNSKALILRTN-FF 165
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
GP Q++S WI + L++ EK++ F D P+ + + ++L R +
Sbjct: 166 GPGLEWRQSLS--------DWIITSLNRNEKIKAFSDVFFTPISMFHLSNLML----RLI 213
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMA-EVDRGVQSPADISMDIT 274
+E+ + + +V G +R+S+ A + + + PAD+ I+
Sbjct: 214 TEEAKG--IYHVVGSERISKYDFAVSISKILNKPADLIQAIS 253
>gi|343426532|emb|CBQ70061.1| related to Vacuolar protein sorting-associated protein VPS5
[Sporisorium reilianum SRZ2]
Length = 1252
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 44/243 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q + K YD A S P L ++L
Sbjct: 2 KVLITGASGLLGRAVHQ---QCIDKGYDTQALAFSRADPAKKL---------VKLNLTDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ +F +PDV+V+ AA P V E DP ++ +INV P+S+ + +K L
Sbjct: 50 AAVESCLREF-EPDVIVHTAAERRPDVVEKDPAASHAINVDAPASIATIAAQL--DKVPL 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYGP 180
LI++STD V++G K YK +D P+N YG SK+ E+ + E K +F LR ++YG
Sbjct: 107 LINISTDYVFDGSKPPYKVDDAPNPLNAYGVSKLQGERAVEEHAKPGHFTNLRVPVLYGR 166
Query: 181 -------------QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
I P P S + D+ R P V DV K IL
Sbjct: 167 TITNDESAVNILLDAIQPPPGSTATKKCDAYA------------VRYPTNVADVAKAILK 214
Query: 228 LTN 230
L
Sbjct: 215 LAQ 217
>gi|323446280|gb|EGB02502.1| hypothetical protein AURANDRAFT_72848 [Aureococcus anophagefferens]
Length = 870
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 124/312 (39%), Gaps = 76/312 (24%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVLVVG +GY+ QHL+ LS + V TH P + S +D +S
Sbjct: 99 KRVLVVG-SGYVAQHLVASLSAT--GEFAVCYTHRRAAAPFAAPPGV-DSCALDLLDAES 154
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
A AL +PDVVVNCAAL+ P CE D A + N P + L + + LL
Sbjct: 155 C----AAALWAQRPDVVVNCAALASPAACEADEARAAATNCPLGFLECLHACCPDA--LL 208
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPV---------------------NVYGKSKVAAEKFI 162
+H STD V GV +D+ AP YG++K+A E +
Sbjct: 209 VHCSTDLVLAGV------DDDGAPAYGDGGASAPRAAALAAAARPATAYGRTKLAFEAAL 262
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLP---IQWIDSVLSKGEKVEFFHDECRCPVYVR 219
+ R S + G +P P + QW+ L +GE V + DE R V VR
Sbjct: 263 AAGWQRAVVFRLSNVVG----APAPFTGDGKFAQWVAGELRRGEPVTLWSDEARNFVDVR 318
Query: 220 DVVKIILAL----------------------------TNRWLSEDKQMQ----LLLNVGG 247
V + A T R+ ++ + + L +N GG
Sbjct: 319 QVCDGVAAAARLYGVSRQPCDASDARALAAAAHSPAETARFHAKARALHPAVFLHVNCGG 378
Query: 248 PDRVSRVQMAEV 259
PD +SR +
Sbjct: 379 PDCLSRYALGRA 390
>gi|302348458|ref|YP_003816096.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15]
gi|302328870|gb|ADL19065.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15]
Length = 283
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 50/308 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R LV+G TG LG L+ L K DVA T+H + P F +D+ +
Sbjct: 3 ERYLVLG-TGQLGSELVGLLRGEREKGKDVAYTYHGSD---------PFGF-GQQLDVTN 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K PDV++N A++ CE+D A+ +N + V ++ + +
Sbjct: 52 FELLEDLIIKV-SPDVIINAVAMTNVDACESDRARALKVNAEA--VKHVARAVRVVGSYM 108
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IH+STD V++G K Y+E++E P+N YG +K+ E + + ++R+S ++
Sbjct: 109 IHVSTDYVFDGTKGLYREDEEPNPINYYGLTKLLGEAYALSYDDSL-VVRTSGVF----- 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
K P ++ L +G V+ + P+ R + + ILAL + + ++
Sbjct: 163 --RDKGFP-SFVVRQLRQGRAVKAYAG-FYSPISARKLAEAILALA------ELRKTGII 212
Query: 244 NVGGPDRVSRVQMA-EVDRG------------------VQSPADISMDITKLVQTLNIDP 284
NV G +RVSR Q+A EV + + P D S+DI++ LN D
Sbjct: 213 NVAG-ERVSRYQLAVEVAKAFGLDPSPVTEVKEVEGWVAKRPYDSSLDISRARALLNFDF 271
Query: 285 VTYKDGVK 292
+ ++ ++
Sbjct: 272 YSLRENLR 279
>gi|110636916|ref|YP_677123.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC
33406]
gi|110279597|gb|ABG57783.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC
33406]
Length = 298
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++L+ G G LGQ L+ S + KP + AT ++ D +++ +D+ S
Sbjct: 2 KILITGSNGLLGQKLV---SLLYLKPEITLIATARGANRDEIYED-----YIYESMDITS 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V K +PD V++ AA++ CE + ++ + N+ S V + + L
Sbjct: 54 EENVLKVFRKH-KPDAVIHTAAMTHVDQCELNKEACVDQNITS--VKHIVKACKEVGAFL 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+STD +++G + EE+ PVN YG +K AEK + +AI R+ +++G +
Sbjct: 111 LHVSTDFIFDGTRGPLTEEEIPNPVNYYGWTKWEAEKAVENSGLKWAIARTVLVFG--VV 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S + W+ + L + +++ +D+ R P D+ WL Q + +
Sbjct: 169 QDMSRSNIVLWVKNNLEQKKEINVVNDQWRTPTLAEDLA------MGCWLIVKNQAEGIF 222
Query: 244 NVGGPDRVSRVQMA-------EVDRGVQSPADIS 270
N+ G + +S ++A ++D+G+ AD S
Sbjct: 223 NISGEEMLSPYELAHKVADVWKLDKGLIKQADSS 256
>gi|209967308|ref|YP_002300223.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum centenum SW]
gi|209960774|gb|ACJ01411.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum
SW]
Length = 299
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 38/241 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++R+L++GGTG +G L + E + + V+A S +D
Sbjct: 1 MERRRLLLLGGTGQVGTALRRLAPE---RGWSVSAPERSV------------------LD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + D++ D+VVN AA + E + D+A++ N ++ L+ E
Sbjct: 40 LATAD-RDSLRQAVAAADLVVNAAAYTRVDQAETERDAAIAAN--ATGPGLLARVCAEAE 96
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+HLSTD V++G + Y+E+D +AP+ VYG SK A E + E ILR++ ++
Sbjct: 97 RPLLHLSTDYVFDGSGTRPYREDDPVAPLGVYGASKAAGEAAVREAGPRHVILRTAWVFS 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
P + ++ ++L G +V D+ CP D+ L + +R L+ D
Sbjct: 157 PDGNN---------FLRTMLRLGRERPEVRVVDDQRGCPTAADDIAAACLGIADR-LAAD 206
Query: 237 K 237
+
Sbjct: 207 R 207
>gi|428778940|ref|YP_007170726.1| dTDP-4-dehydrorhamnose reductase [Dactylococcopsis salina PCC 8305]
gi|428693219|gb|AFZ49369.1| dTDP-4-dehydrorhamnose reductase [Dactylococcopsis salina PCC 8305]
Length = 294
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD+++N A + E++P+ A ++N S+ L+ E L H+STD V++G
Sbjct: 51 QPDIIINAGAYTSVDRAESEPELAHAVN--SNAPTILAESAEKIGARLFHISTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D+ P+ VYG+SK E+ I C+N+ ILR++ +YG +
Sbjct: 109 KNKPYTEQDKTHPIGVYGRSKQGGEEGIKSHCNNYVILRTAWVYGVYGKG--------NF 160
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++L G E+++ D+ P + D+ K I+ L
Sbjct: 161 VKTMLRLGQEREELKVVFDQVGTPTWTNDIAKAIMGL 197
>gi|149909225|ref|ZP_01897882.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36]
gi|149807749|gb|EDM67695.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36]
Length = 293
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G +GQ + I+ + +DV T T +D+ +
Sbjct: 3 RLLVTGQKGQIGQSIK---DRIDHQEWDVLLTDIET------------------LDITNA 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V F +P+VV+N AA + EN+ +A S+N + L+ N LLI
Sbjct: 42 AQVARVFKAF-KPNVVINAAAYTEVDKAENEAGAAESVNAYGPYL--LALQCHNVGALLI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H ST+ ++ G Y E D AP+NVYG++K+ E++I S++ I+R+S ++
Sbjct: 99 HFSTEYIFNGHSDCRYVETDTPAPLNVYGRTKLQGEQYIKTYLSHYIIIRTSWVFSEYAR 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-L 242
+ V L S+ + E + +D+ CP Y DV + L + ++E + QL
Sbjct: 159 NFVTTML------SLRREAEPIRIVNDQFGCPTYAGDVANLALDIAKERMAETNRYQLGE 212
Query: 243 LNVGGPDRVSRVQMA 257
N G VS A
Sbjct: 213 YNFCGDSEVSWFDFA 227
>gi|392310811|ref|ZP_10273345.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas citrea NCIMB
1889]
Length = 289
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 122/258 (47%), Gaps = 33/258 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K+V++ G TG LG+ LL L E+ G + A S + +L L+ F D
Sbjct: 2 KKVMITGATGMLGRALLNTLKPIFEVIGTGFSRA----SDNIAKLDLNDQEAICQFLDTH 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
QPDV+++ AA P VCE P+ +++NV ++ +L+ + +
Sbjct: 58 ---------------QPDVLIHAAAERKPDVCEQSPEQTLALNVQAT--QFLAQQCKLRN 100
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LI +STD V++G ++ Y E P+N YG+SK AE+ + +++R ++YG
Sbjct: 101 IRLIFISTDYVFDGTQAPYIENSATNPLNFYGQSKQQAEQAVLANSELHSVIRVPVLYG- 159
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSEDKQM 239
++ + +S + I +S+ + E H R P +V D+ ALT R L + +
Sbjct: 160 -DVTHLAES-AVTVIAEQISETQPSEHDHWAIRYPTHVEDI-----ALTLRDLLKQPDNL 212
Query: 240 QLLLNVGGPDRVSRVQMA 257
+ ++ +S+ MA
Sbjct: 213 GGIFHISNHQAMSKYDMA 230
>gi|257387274|ref|YP_003177047.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM
12286]
gi|257169581|gb|ACV47340.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM
12286]
Length = 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 36/235 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHST------PLPQLLLDALPHSFVFFD 58
R+LVVG G LG +++ + + +DV T+HST PL Q
Sbjct: 2 RLLVVGANGLLGSNVVLAGQQ---RGWDVCGTYHSTQPAFDIPLTQF------------- 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSA--MSINVPSSLVNWLSSFT 116
DL FD L PDVV+NCAA++ CE +P+ A ++ N P L T
Sbjct: 46 -DLGEHDTFDET-LAEHDPDVVINCAAMTDVDGCETNPEQAYVLNGNAPGELA------T 97
Query: 117 ENKENL--LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ N IH+STD V++G ++ Y E + P VYG+SK+ E+ ++ + I R
Sbjct: 98 DCDANGVDFIHVSTDYVFDGTQRTPYSESADPDPAQVYGQSKLVGEQAVHGEVPETLIAR 157
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S ++G P WI + E V F D+ P + +L L
Sbjct: 158 LSFVWGIHRSRGDLTGFPA-WIRNRHQSDETVPLFTDQWVTPTRAGQAAETLLDL 211
>gi|295676079|ref|YP_003604603.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002]
gi|295435922|gb|ADG15092.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002]
Length = 307
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGK-PYDVAATHHSTPLPQLLLDALPHSFVFFDV--DL 61
+V V+GG+G LG+ L+ E+ G+ + + +T S P PQ+ V DV L
Sbjct: 3 KVAVIGGSGLLGRALID---ELAGQVDWHIVSTAFSRPSPQM---------VRLDVRDSL 50
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D V PD VV AA P VCE DP A ++NV + V ++S
Sbjct: 51 AVERFIDHVV-----PDAVVIAAAERRPDVCERDPAHARALNVDA--VQMIASAANRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ +STD V++G Y+ + AP+N YG+SK+ E+ + E +LR ++YGP
Sbjct: 104 WTLSISTDYVFDGKHPPYRHDSTPAPLNAYGQSKLEGERALIETAERGCVLRLPLLYGP 162
>gi|448584430|ref|ZP_21647304.1| RmlD substrate binding domain superfamily protein [Haloferax
gibbonsii ATCC 33959]
gi|445728328|gb|ELZ79934.1| RmlD substrate binding domain superfamily protein [Haloferax
gibbonsii ATCC 33959]
Length = 218
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 100 MSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAA 158
M+ V + L++ +++E +H STD V++G Y+E+ E AP+ YG+SK+A
Sbjct: 1 MAAAVNGTAPGDLAAVCDDREIPFVHYSTDYVFDGETDGLYEEDAETAPIQEYGRSKLAG 60
Query: 159 EKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYV 218
E+ + E ++ +LR S +YG + + P QW+ S L+ G+ V F D+ P
Sbjct: 61 ERAVREVTADALVLRLSFVYGARGDTGDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRA 119
Query: 219 RDVVKIILALTNRWLS-------------EDKQMQLLLNVGG-PDRVSRVQMAEVDRGVQ 264
+V L L + +S D ++ +GG P + MA++DR
Sbjct: 120 GNVATTTLELLDAGVSGTYHVASQSAVTPSDFGAEICEVIGGDPSLIESSVMADLDRPAA 179
Query: 265 SPADISMDITKLVQTLN 281
P +D++K+ L
Sbjct: 180 RPRRSCLDVSKVEGELG 196
>gi|156050135|ref|XP_001591029.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980]
gi|154692055|gb|EDN91793.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 315
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 26/266 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K+ L+ G TG LG+ +L+ + ++V T S P +L A DL S
Sbjct: 3 KKALITGATGLLGRQVLKVFDR---ENWNVVGTGFSRAKPPTILKA----------DLAS 49
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S V L +P VV++CAA P C+NDP+ ++N+ +S L+ + LL
Sbjct: 50 ESEVSKV-LDESKPQVVIHCAANRFPDKCDNDPEGTRALNIAASAS--LAKLCAAQSILL 106
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
I++STD V+ G + + Y+ P N+YG++K EK + YEK +LR
Sbjct: 107 IYISTDYVFPGTEGDAPYETSHSPKPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRVP 166
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
++YG + I + K V+ H R P D+ +++ + ++L
Sbjct: 167 VLYGEGEPEESAIGVLINSVWKAQEKDANVKMDHWAIRYPTNTEDIGRVLSDIAIKYLES 226
Query: 235 -EDKQMQLLLNVGGPDRVSRVQMAEV 259
E + +L D+ ++ ++ ++
Sbjct: 227 KEPSSLPRILQFSSEDKYTKYEICQL 252
>gi|196232434|ref|ZP_03131287.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428]
gi|196223506|gb|EDY18023.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428]
Length = 296
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++++VG G LG LL+ E + +V + LLD S + +D
Sbjct: 3 RKIVIVGSGGRLGAALLREWRE---RGEEVVGFNRE------LLDLGDFSAIRERLD--- 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
AL+F DV+VNCAA + CE +P+ A +N S V L+ K+
Sbjct: 51 -------ALEF---DVLVNCAAQTNVDRCECEPEEAFRVN--SGGVAALADVCTRKKARC 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K Y E+DE P++ YG+SK++ E+ + I+R S ++GP
Sbjct: 99 IHISTDYVFDGTKEKPYTEDDEPRPISKYGESKLSGERCLQAVSDRHLIVRVSWVFGPDR 158
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
S V Q I L++ ++VE D+ P Y D +++ L +
Sbjct: 159 ASFVD-----QIIQRALTQ-DRVEAIADKISVPTYTLDAARLLWPLVEQ 201
>gi|427711660|ref|YP_007060284.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. PCC 6312]
gi|427375789|gb|AFY59741.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. PCC 6312]
Length = 317
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 2 SKKRVLVVGGTGYLGQHLLQ---GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S RV+++G G +G L Q L I+ P ++ +P +
Sbjct: 8 SSLRVMILGANGQVGWQLQQQGLALKRIDTFPLEI--------IP------IARQGTQLT 53
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+DL S V ++ QP +V+N AA + E++P+ A+ IN ++ L+ E
Sbjct: 54 LDLTDSSAIQTV-IRTHQPHIVINAAAYTAVDRAESEPELALEIN--GTVPGVLAVAVEK 110
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LLIH STD V++G S Y E D P+N YG+SK+ E+ I K N ILR+S +
Sbjct: 111 IGGLLIHYSTDYVFDGTSSTPYLETDSTTPINAYGQSKLIGEQAIQAKAQNHLILRTSWV 170
Query: 178 Y 178
Y
Sbjct: 171 Y 171
>gi|386811463|ref|ZP_10098689.1| TDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
gi|386406187|dbj|GAB61570.1| TDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
Length = 331
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 80 VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-F 138
V+N A + CE + A +NV S++N L ++E LIHLSTD V+ G S
Sbjct: 73 VLNGAGSCALKSCEMNSVLAYRVNV-QSVLNVLE-MMGDQEIRLIHLSTDLVFPGKPSGL 130
Query: 139 YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSV 198
Y EE ++PV +YGK+ AE+ I + + AI R S+ P IS + I WI S
Sbjct: 131 YTEESPLSPVTMYGKTMALAEEIIMLRYPSAAIFRISL---PMGISVNGHAGAIDWILSR 187
Query: 199 LSKGEKVEFFHDECRCPVYVRDVVKII-LAL-----------TNRWLSEDKQMQLLLNVG 246
K + DE R P Y D KI+ L L ++R LS + Q++ VG
Sbjct: 188 FKKNNPATLYFDELRSPFYCEDFNKIVELTLGEKIRGIYHLGSHRHLSLYQIGQIVNKVG 247
Query: 247 G--PDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
G P + E +++M KL++ L +DP
Sbjct: 248 GYAPHLLKGCMRKEAGPMPPRAGNVTMSNRKLIEALGVDP 287
>gi|189424718|ref|YP_001951895.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ]
gi|189420977|gb|ACD95375.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ]
Length = 277
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 139/312 (44%), Gaps = 54/312 (17%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LVVG G LGQ L+ L E G+ D LP D+D+
Sbjct: 2 ILVVGANGMLGQDLMGLLGE-RGRGVD-----------------LP------DIDITDMV 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
V +P VV+NCAA + CE++ ++AM +N V +L+ T L+
Sbjct: 38 SVQQVLTAL-KPKVVINCAAYTDVDGCESNTETAMQVN--GEGVAFLALVTREIGAKLVQ 94
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G K S Y+E+D P+N+YG+SK+A E + N ++R+ +YG +
Sbjct: 95 VSTDYVFDGSKGSPYREDDLQQPLNIYGESKLAGELNVDINPDNL-LVRTQWLYGLHGKN 153
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------------- 231
V L + SVL+ D+ P + D+ + I+AL ++
Sbjct: 154 FVETMLKLGQEKSVLT------VVDDQIGSPTWTMDLARGIIALVDKDCRGTYHCANSGH 207
Query: 232 --WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
W K + G P +V + +++R + P ++D +KLV +P +++
Sbjct: 208 TSWNGFAK--AIFDEAGLPVQVLPMTTEQLNRPARRPLYSTLDCSKLVADTGFEPQAWRE 265
Query: 290 GVK--LTLAAEA 299
+K L L EA
Sbjct: 266 ALKQYLNLRKEA 277
>gi|71022409|ref|XP_761434.1| hypothetical protein UM05287.1 [Ustilago maydis 521]
gi|46101303|gb|EAK86536.1| hypothetical protein UM05287.1 [Ustilago maydis 521]
Length = 1249
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 44/241 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q + K YD A L L S +DL
Sbjct: 2 KVLITGASGLLGRAVHQHCID---KGYDSKA---------LALTRSDPSKQLVKLDLTDT 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ + + L+ QPD++V+ AA P V E DP ++ +INV P+S+ L+S EN L
Sbjct: 50 AAVE-LCLREYQPDLIVHTAAERRPDVVEKDPAASHAINVDAPASIAT-LASQLENAP-L 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCSNFAILRSSIIYGP 180
L+++STD V++G K Y +D P+N YG SK+ E+ + + K F LR ++YG
Sbjct: 107 LVNISTDYVFDGSKPPYTVDDAPNPLNAYGVSKLQGERAVASHAKPGYFTNLRVPVLYGK 166
Query: 181 -------------QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
I P P S +Q D+ R P V+DV K IL
Sbjct: 167 TITNDESAVNVLLNAIQPPPGSTDLQKCDAYA------------VRYPTNVQDVAKAILK 214
Query: 228 L 228
L
Sbjct: 215 L 215
>gi|402772656|ref|YP_006592193.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
gi|401774676|emb|CCJ07542.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. SC2]
Length = 310
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 31/254 (12%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+ R V+GG+G +G L++ LS + + A+ P+ + + + D+
Sbjct: 5 ASARYCVIGGSGAIGSALMKSLS---AQRKEAIASTRRQPVDR-------QNEFYLDL-- 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
G D L F DVV+ A+++ C ++P+ A +NV + ++ ++ K
Sbjct: 53 ----GADLPELSFSARDVVILTASMTRLAECRSEPERARRVNVDAQVL--IAEQAVKKGA 106
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++ LST+QV++G KS E+ +P +VYGK K AE + + AI+R S + GP
Sbjct: 107 FVVFLSTNQVFDGTKSGVGPEEPRSPRSVYGKLKAEAESALSRLGDSVAIVRLSKVVGPH 166
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
L +W LS+GE +E F D P+ + VV + + R L
Sbjct: 167 L------DLFQRWRRE-LSRGETIEAFDDLLLAPIAMAKVVAGVELIGLRRLGG------ 213
Query: 242 LLNVGGPDRVSRVQ 255
+ ++GG D +S +Q
Sbjct: 214 VWHLGGSDEISYLQ 227
>gi|220932571|ref|YP_002509479.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168]
gi|219993881|gb|ACL70484.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168]
Length = 287
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKENLLIHLSTDQVYEG- 134
PD+V++C AL CE D A IN + V SS E K L+++ST V+ G
Sbjct: 50 PDIVIHCLALDDIEACERDKAMAFQINSYGAQNVAIASSMCEAK---LVYISTSHVFSGR 106
Query: 135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+E DE+ PVNVYG SK+ AE FI E F I+R+ +YGP S + K +
Sbjct: 107 LNRPYRESDELQPVNVYGLSKLLAENFIKEINRKFFIVRTGWLYGPGRDSLIGKLIET-- 164
Query: 195 IDSVLSKGEK-VEFFHDECRCPVYVRDVVKII 225
SK EK VE D P ++ D+ II
Sbjct: 165 -----SKQEKTVELPGDRYDTPTFIGDLAHII 191
>gi|294142523|ref|YP_003558501.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12]
gi|293328992|dbj|BAJ03723.1| dTDP-4-dehydrorhamnose reductase, putative [Shewanella violacea
DSS12]
Length = 306
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++++ G TG LG+ + ++IE + + V AT S + + +DL +
Sbjct: 3 KIMITGATGLLGRAVK---TQIEASQIHQVIATGFSRAQAGI-----------YKLDLTN 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D + QPD++V+CAA P V E +P +A+++N+ ++ L+ +
Sbjct: 49 TQAADEF-IAHHQPDIIVHCAAERRPDVSELNPSAALALNLGAT--KALAESASKHGIWI 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I++STD V++G Y E + P+N YG+SK E+ + +FA+LR I+YG +
Sbjct: 106 IYISTDYVFDGSAPNYAEFHKPNPLNFYGESKWQGEQALLATSKDFAVLRLPILYG--QV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
V +S + ++ ++ K + E H R P +D+ I + + +++ +++ +
Sbjct: 164 ETVSESAILILLNHLMDK-QTQEVDHWAVRSPTSTQDIALAIEKMIDLQVAQ-QELSGIY 221
Query: 244 NVGGPDRVSRVQM 256
+ G + +S+ QM
Sbjct: 222 HFSGKETMSKYQM 234
>gi|443898086|dbj|GAC75424.1| C-3 sterol dehydrogenase [Pseudozyma antarctica T-34]
Length = 1153
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + +E K YD A + P S +DL
Sbjct: 2 KVLITGASGLLGRAVHHLCTE---KSYDTKALAFTRSDP---------SKGLVKLDLTDP 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ LK QPDV+V+ AA P V ENDP ++ +INV P+S+ + +K +
Sbjct: 50 AAVESC-LKDFQPDVIVHTAAERRPDVVENDPAASHAINVEAPASIATLAAQL--DKPPI 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYG 179
LI++STD V++G K Y +D P+N YG SK+ E+ + E K +F LR ++YG
Sbjct: 107 LINISTDYVFDGSKPPYTVDDAPNPLNAYGVSKLQGERAVAEHAKPGHFTNLRVPVLYG 165
>gi|325295552|ref|YP_004282066.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066000|gb|ADY74007.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 291
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+VVVNCAA ++ E D SA+ +N S V L+ L+H STD V++G
Sbjct: 59 KPNVVVNCAAYNLVDKAEEDYVSAVKVN--SVGVRNLAFACNRYRAFLVHYSTDYVFDGK 116
Query: 136 K--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
K + Y E+D+ P+N YGKSK+ E+FI E+ NF ILR S +YG + + K L +
Sbjct: 117 KENALYIEDDKPNPLNEYGKSKLIGEEFIKEEIDNFLILRVSWVYGEGRQNFIYKLL--K 174
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
W ++ + ++ +DE P R +V + L
Sbjct: 175 WAEN----NDYLKISYDEISVPTSTRTIVDVTL 203
>gi|385811284|ref|YP_005847680.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
gi|383803332|gb|AFH50412.1| dTDP-4-dehydrorhamnose reductase [Ignavibacterium album JCM 16511]
Length = 303
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV----FFD 58
K R+L+ G G LGQ L + S+ L L A SF+ +
Sbjct: 8 KNRILIFGSNGMLGQRLSEYFSK--------------NSLELLTSSAEEKSFIENLDYVQ 53
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D+ + + F PD ++N AA + + E + ++A +NV + V +++
Sbjct: 54 CDITDRNKTKNLIYDFC-PDFIINAAAFTNVDLSETERETAWKVNVKA--VEYMAEAARI 110
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +IH STD +++G Y E P+ YG++K+A+E + I+R++++Y
Sbjct: 111 IDAHIIHFSTDYIFDGRNGPYLESAMPNPLGYYGRTKLASENVLKLYAVKHTIIRTNVLY 170
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GP + ++W+ L +++ D+ P Y+ D+V+ + + + +
Sbjct: 171 GPAKFG---RPDFVKWVVESLKNKKQIRIVTDQINNPTYLDDLVQAVDKII------ESK 221
Query: 239 MQLLLNVGGPDRVSRVQMAEV 259
+ + N+GG + +SR + ++
Sbjct: 222 REGIYNIGGQEFLSRFKFTQI 242
>gi|386001792|ref|YP_005920091.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta harundinacea 6Ac]
gi|357209848|gb|AET64468.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta harundinacea 6Ac]
Length = 312
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V+ + AAL+ CE+DPD A NV + ++ L+++STD V++G
Sbjct: 63 PQVIFHTAALTDVDRCEDDPDLAWRTNVLGT--ERVARAAAEVGAHLVYVSTDYVFDGEG 120
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ--- 193
Y+EED PVN Y ++K++AE F C A R+S+IYG + P S +
Sbjct: 121 GMYREEDRTDPVNCYARTKLSAEGF----CDLVA--RTSVIYGAR-----PASGKVNFAL 169
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
W+ L+ GE+V D+ P ++ +++L R LS + ++ G RVSR
Sbjct: 170 WLIERLAAGEEVRIVTDQFITPTLNTNLARMLLEAGERRLSG------VYHMAGATRVSR 223
Query: 254 VQMA-EVDRG-------------------VQSPADISMDITKLVQTLNIDPVTYKDGVK 292
A E+ R + P D S+D +K + L P ++ ++
Sbjct: 224 YDFAVEIARAFGLDEGLIAPSRISDMRWRAKRPRDSSLDTSKAARLLAEGPSPLRESLR 282
>gi|91782662|ref|YP_557868.1| NAD dependent epimerase/dehydratase [Burkholderia xenovorans LB400]
gi|91686616|gb|ABE29816.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
Length = 306
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 16/176 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G +G LG+ L L++ G + VAAT S P P + +D++
Sbjct: 3 KVAVIGASGLLGRALADELAQQPG--WQVAATAFSRPAPGRIA-----------LDIRDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ ++ PD +V AA P VCE+DP A ++NV + V L++ + +
Sbjct: 50 QAVEQF-VEREAPDALVIAAAERRPDVCEHDPALARALNVDA--VRTLAAAANRRGAWTL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+STD V++G Y+ + AP+N YG SK+ E+ + E +LR ++YGP
Sbjct: 107 SISTDYVFDGTHPPYQHDSVPAPLNAYGHSKLEGERALTESTDLGCVLRLPLLYGP 162
>gi|320104538|ref|YP_004180129.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644]
gi|319751820|gb|ADV63580.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644]
Length = 318
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 46/283 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
LVVGG+G +G LL+ L+ G P TH +TP P + +DL
Sbjct: 18 ALVVGGSGQIGGWLLESLAR-RGLP--AVGTHQTTPAPGTV-----------PLDLGDAQ 63
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
+A+ ++ +P ++ A + CE DP + N P L S E +
Sbjct: 64 SVEALLVEL-RPPLIFLPAGFTWVDGCERDPVRCDAANRREPIRLARLASRIV--PEVRV 120
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS-NFAILRSSIIYGPQT 182
IH STD V++G EE P++ YG++K+AAE+ + E I+R++ ++GP+
Sbjct: 121 IHFSTDYVFDGAHGPDDEEAIPNPLSEYGRAKLAAERELTELLGERLLIIRTTWVFGPER 180
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
K+ Q + L +G+ + D+ P Y D+ ++ L R L
Sbjct: 181 QG---KNFAYQ-VARTLREGKPLVCPSDQISNPTYSPDLADAVVELALR------SAHGL 230
Query: 243 LNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
L++ GPDR+ R + A +L Q LN+DP
Sbjct: 231 LHLAGPDRLPRCEFAR----------------RLAQGLNLDPT 257
>gi|158333988|ref|YP_001515160.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017]
gi|158304229|gb|ABW25846.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017]
Length = 304
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 48/287 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-LPHSFVFFDV 59
M+K R+L++G G LGQ L + L + G+ V +P+ L +A LP
Sbjct: 1 MAKSRILLLGAQGQLGQELQKTLPTM-GELIAVGKETVDLAVPEQLHEAILP-------- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD++VN AA + E++ A ++N + V L+ +
Sbjct: 52 ---------------VQPDIIVNAAAYTAVDRAESEVKLAHTVNQKAPTV--LAELAQTL 94
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LLIH+STD V++G +S Y E D P +VYG SK E+ I + ILR++ +Y
Sbjct: 95 GALLIHISTDYVFDGTQSHPYTESDAPHPQSVYGHSKWQGEEGIRQTWDQHIILRTAWVY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G Q ++ ++L G + V D+ P + +++ I +L + W +
Sbjct: 155 GTQGKG--------NFVKTMLRLGRERSDVRVVDDQVGTPTWAKEIGDAIASLIHHWSTS 206
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
D Q L G + +RGV S D ++ I Q L +
Sbjct: 207 DPVTQAELY--GTYHFT-------NRGVASWYDFAVAIFAEAQALGV 244
>gi|345888284|ref|ZP_08839386.1| hypothetical protein HMPREF0178_02160 [Bilophila sp. 4_1_30]
gi|345040915|gb|EGW45130.1| hypothetical protein HMPREF0178_02160 [Bilophila sp. 4_1_30]
Length = 285
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++F PDV+ N + + E P A+S+N L +L + L+H S+DQV
Sbjct: 50 IEFINPDVIFNTVSWNTENPAEKQPQEALSVN--RGLPAFLGGLVKGTPRFLVHYSSDQV 107
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKS 189
+ G K S Y EED+ P+++ GKS++A E+ + E N I+R+ ++GP S + +
Sbjct: 108 FNGRKDSPYTEEDKADPISLCGKSRLAGEQALLELNADNICIIRTGWLFGPDGDSFLKRL 167
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
L ++G VE HD+ P Y +D+ + L L R
Sbjct: 168 L-----GQAKTEG-TVEVIHDQIGSPTYAKDLAQATLQLVKR 203
>gi|325970226|ref|YP_004246417.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
gi|324025464|gb|ADY12223.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 21/179 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G G LG L + L E AT LP + V DVD +
Sbjct: 3 ILITGAHGQLGNELQKILEE---------ATSERGKLPLFYERS---RIVAVDVDELDIT 50
Query: 66 GFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN 121
DAV F +P++ NCAA++ CE + D+A +N P +L + E
Sbjct: 51 SSDAVDAFFSVHKPNLAFNCAAMTNVDGCEGNEDAAYLVNAVGPKNL----ALACERHGA 106
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V++G+ + Y E DE AP YG+SK+A E+F+ C N I R++ +YG
Sbjct: 107 RLMHISTDYVFDGLGTRPYVETDETAPNTAYGRSKLAGEQFVLASCRNSCICRTAWLYG 165
>gi|116749692|ref|YP_846379.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
gi|116698756|gb|ABK17944.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
Length = 294
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 38/250 (15%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+P +V+NCAA + E +P +A ++N P+ + ++ + LIH+STD V++
Sbjct: 52 RPRLVINCAAYTAVDRAEGEPGAAFAVNRDGPAHI----AAACGRLNSPLIHISTDYVFD 107
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G S YKE+D + PV+VYG+SK E + + N I+R++ ++G S V L +
Sbjct: 108 GRASAPYKEDDPVNPVSVYGRSKWEGEAAVRSRLQNHLIVRTAWLFGANGNSFVKTILRL 167
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGPDRV 251
++ ++ D+ CP + D+ + L+ R L + + + G V
Sbjct: 168 A------AERAELRIVSDQYGCPTWTGDLASALTGLSKRVLDGARTVPWGTYHYCGKGAV 221
Query: 252 SRVQMAEV-------DRGVQSPADIS-----------------MDITKLVQTLNIDPVTY 287
S + A RG + PA + +D K+ I+PV++
Sbjct: 222 SWYEFARAIVEASAFARGGKMPAVVPIATADYPLPARRPAWSVLDCGKMASEFGIEPVSW 281
Query: 288 KDGVKLTLAA 297
++G+ + + A
Sbjct: 282 REGLAVVIGA 291
>gi|337287918|ref|YP_004627390.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobacterium sp. OPB45]
gi|334901656|gb|AEH22462.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobacterium geofontis
OPF15]
Length = 277
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G L + + E K Y AA P+ LD
Sbjct: 2 KFLITGARGQLAREFISYFQE---KGYGFAA------FPKDELDV--------------- 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S F+ V +K +PD+++NC+A + + E + A +N + N S E K L
Sbjct: 38 SDFEKVYQTIKEIKPDIIINCSAYNQVDLAEKEKHLAYKVNTIG-VYNLAISAREIKAKL 96
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H STD V++G K+ FY EED+ P+N YGKSK+ E FI E N+ I R S +YG
Sbjct: 97 -VHYSTDYVFDGTKTGFYTEEDQPNPLNEYGKSKLFGEFFIQEVLENYLIFRVSWVYGKG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
T + + K ++ K E ++ DE P R +V++ L
Sbjct: 156 TQNFLYK------LEEWAKKQEVLKIAVDEFSVPTSTRTIVEVTL 194
>gi|284039662|ref|YP_003389592.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74]
gi|283818955|gb|ADB40793.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LGQ L+ GL + +A LP + + +D+
Sbjct: 2 KKILLTGANGLLGQKLV-GLLTKQPNVELIATARGENRLP------FSDGYTYRAMDITD 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PDVV++ AA++ CE D+ + NV + V ++ L
Sbjct: 55 RQQVLDV-IGDVRPDVVIHGAAMTDVDKCEVQKDACWAQNVHA--VEYIIEACRAANAFL 111
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+H+STD +++G Y E+ E P++ YG SK A E + +AI R+ ++YG
Sbjct: 112 VHVSTDFIFDGAAGPYDEDAEANPISFYGWSKQAGESAVRHSDIRWAIARTVLVYG--IA 169
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W+ L G+ ++ D+ R P D+ +L D++ + +
Sbjct: 170 HDMSRSNIILWVKKSLEDGKNIKVVTDQWRSPTLAEDLA------MGCFLIADQEAEGIF 223
Query: 244 NVGGPDRVSRVQMA 257
N+ G + ++ +MA
Sbjct: 224 NISGKEVLTPYEMA 237
>gi|386874689|ref|ZP_10116922.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus
Nitrosopumilus salaria BD31]
gi|386807558|gb|EIJ66944.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus
Nitrosopumilus salaria BD31]
Length = 249
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 28/230 (12%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
V+ G G+LG + L K + S +L D+ + F
Sbjct: 5 VIIGCGFLGSKIFTNLKNNNKKVIGTNFQNTSNEFKKL------------DI-----TNF 47
Query: 68 DAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
D V L +PD+V+NCAA + E + A +N V ++ + + LIH
Sbjct: 48 DLVNSFLNKEKPDLVINCAANTDIDYLEKNEKFANMVNGIG--VENIAKTCKEISSKLIH 105
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII-YGPQTIS 184
+STD V++G + YKEED++ P+NVYGKSK+ EK + E +F I+R+++ Y Q
Sbjct: 106 ISTDSVFDGTQGLYKEEDDVKPINVYGKSKLLGEKLLQENLDDFIIIRTNLFGYHHQG-- 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
WI L + ++ F D P+ + + +IL N S
Sbjct: 164 ----KFLFNWILKNLKENKEFTGFEDIIFNPLEISFLSDLILKFGNMEYS 209
>gi|281204543|gb|EFA78738.1| methionine adenosyltransferase regulatory beta subunit
[Polysphondylium pallidum PN500]
Length = 305
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 16/258 (6%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K RVLV G +G LG+ ++ + K ++V S + + F VD+
Sbjct: 4 KIRVLVTGSSGLLGRAFMRTFAGCADK-FNVLGLAFSR------YEKYKNQFPLEHVDIN 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ +F +PDV+++ AA P +CEND D + +NV S+ +++ N
Sbjct: 57 DRVQLTDIVNRF-KPDVIIHSAAERRPDICENDKDRVIQLNVKST--EFINELAMNVGAY 113
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-Q 181
L+ +S+D V++G + YK + + P++ YG++K A+E + N ILR ++YG +
Sbjct: 114 LVLISSDYVFDGENAPYKTDAQTNPLSFYGETKRASEVVCLKNPRNI-ILRVPVLYGQVE 172
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
T+S ++ + I K VE + + R P V DV K L L + +
Sbjct: 173 TLSESAVTVVAEQI----KKNANVEIDNWQLRYPTLVDDVAKCTLMLICKKKENGDSISG 228
Query: 242 LLNVGGPDRVSRVQMAEV 259
+ + ++++ +MA V
Sbjct: 229 IYHFTDNQKLTKYEMAVV 246
>gi|156740402|ref|YP_001430531.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM
13941]
gi|156231730|gb|ABU56513.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM
13941]
Length = 281
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 127/259 (49%), Gaps = 33/259 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV- 59
++ + +L+ GG+G+LG L+ + + ++V AT+HS P++ S V +++
Sbjct: 2 LTGRTILITGGSGFLGSALV---NTARAQGWNVVATYHSHQ-PRI-------SGVRWEML 50
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL++G+ + + PDVV++ A + PD M+I + +
Sbjct: 51 DLRNGAATRTLIEQIA-PDVVIHTAYR------QEGPD-MMAITAGGAGAVAQGAVMVRA 102
Query: 120 ENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIHLS+D V++G +S Y E D PV YG +K AE+ + + I+R+S+IY
Sbjct: 103 R--LIHLSSDVVFDGERSGRYTEADAPQPVTAYGAAKADAERLVADTHPAALIVRTSLIY 160
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
G P Q++ V+ + FF DE RCP+ V D+ +L L D+
Sbjct: 161 G----GPKCPGRHEQFVLDVIDGRAEAIFFTDEWRCPIEVGDLAAALLELA----VLDRS 212
Query: 239 MQLLLNVGGPDRVSRVQMA 257
+L+V GPD VSR + A
Sbjct: 213 G--ILHVAGPDVVSRYEFA 229
>gi|116748974|ref|YP_845661.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
gi|116698038|gb|ABK17226.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans
MPOB]
Length = 294
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 49/316 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L+ G +G LG ++ + ++ +++ H P+ +D + V ++
Sbjct: 2 KRLLLTGASGLLGWNVCR----LKRDRWEIHGVAHRHPI---AIDGVRGHVVDLTDRAQT 54
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F + +P V++ AA + C+ + + INV + +++
Sbjct: 55 ADMFRRL-----KPRAVIHAAAATNVNWCQENRAESYRINVEAPF--HIAALCAESAIPY 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ +S+D V++G+ Y E D ++PVNVYG+ K AE+ + + N I R +++G
Sbjct: 108 LFISSDMVFDGLSPPYGERDPVSPVNVYGEQKARAEEMVAAEYPNAVICRLPLMFG---- 163
Query: 184 SPVP-KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK-IILALTNRWLSEDKQMQL 241
P P S +Q + + G ++ F DE R PV V+ I LAL +Q
Sbjct: 164 EPGPFSSGFVQPMIEAMRSGRELPLFTDEIRTPVSAESAVEGIFLAL--------RQTGG 215
Query: 242 LLNVGGPDRVSRVQM----------------AEVDRGVQSPA----DISMDITKLVQTLN 281
+L++GG +RVSR A R V+ PA D+S+D T+ +L
Sbjct: 216 ILHLGGRERVSRYAFGLLLARLAGFGEAGLRACRQRDVKMPAPRPRDVSLDSTRAF-SLG 274
Query: 282 IDPVTYKDGVKLTLAA 297
P +D ++ LA+
Sbjct: 275 YSPGRIEDELRRLLAS 290
>gi|386401506|ref|ZP_10086284.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
gi|385742132|gb|EIG62328.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. WSM1253]
Length = 294
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
DVDL + + F +PDVVVN AA + E++PD A ++N + +++
Sbjct: 35 DVDLLNAVSIERAIAAF-RPDVVVNPAAYTAVDKAESEPDLAFALN--RNGAGLVAAAAA 91
Query: 118 NKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
++ +IHLSTD V++G+K+ Y E D + P +VYG+SK+A E + ILR+S
Sbjct: 92 DQGIPVIHLSTDYVFDGMKTGAYVESDPVNPQSVYGRSKLAGELAVAAANPRHVILRTSW 151
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+Y P + V + I + S+ +++ +D+ CP Y D+ I A+ R
Sbjct: 152 VYAPFGGNFV------RTILRLASERDRLRVVNDQVGCPTYAPDIADAIRAIAGR 200
>gi|329848962|ref|ZP_08263990.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
gi|328844025|gb|EGF93594.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19]
Length = 293
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSF 115
D+DL +A ++ PDV+++ AA + E++PD A IN P L +S
Sbjct: 34 DIDLSRPDSLEA-PVRAASPDVIISSAAYTAVDKAESEPDLARRINGDAPGELARIAASL 92
Query: 116 TENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
L+HLSTD V+ G K Y E D P +VYG +K+A E+ I NF ILR+
Sbjct: 93 NVP----LLHLSTDYVFPGDKDGVYDEADTPEPASVYGATKLAGERQIAANTDNFVILRT 148
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ +Y P + ++ ++L G +++ D+ CP Y ++ + +L + +
Sbjct: 149 AWVYSPYGNN---------FVKTMLRLGKTRDEINVVADQHGCPTYAPEIARALLTVAQK 199
Query: 232 WLSE-DKQMQLLLNVGGPDRVSRVQMAEV 259
++ D +++ + ++ G + AE
Sbjct: 200 IAADPDPKLRGIFHLTGTGETTWADFAET 228
>gi|282165389|ref|YP_003357774.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE]
gi|282157703|dbj|BAI62791.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE]
Length = 281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 51/293 (17%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+++V G+G LG +++ L K ++V T S P V D+ +
Sbjct: 1 MILVTGSGLLGSDVIRVLR----KEHEVTGTFSSHP---------KEGAVRLDI---TDR 44
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G A+ +P+ VV+ AAL+ CE+ PD A SIN + + LI+
Sbjct: 45 GNTIRAVGELKPEYVVHTAALTNVDYCEDHPDEAASINDMGT--KNVVDAARMAGARLIY 102
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+STD V++G K Y+EED + P++VY SK+ E + E AI R+S++YG
Sbjct: 103 VSTDFVFDGSKGMYREEDPVNPISVYAYSKLMGEYRVKE-LPGSAIARTSVVYGN----- 156
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ + W+ L+K + ++ D+ P D I AL + +
Sbjct: 157 -ARQNFVTWVRDSLAKKQTIKVVTDQFNSPTLSYDCALAIAALIRHG------AEGTYHT 209
Query: 246 GGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQ 278
G +R+SR A + + + PAD S+D++K+ Q
Sbjct: 210 AGGERISRYDFAVKIARFYGLDPGLIEPVTSDTLKQKAKRPADSSLDVSKIGQ 262
>gi|410914824|ref|XP_003970887.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Takifugu rubripes]
Length = 311
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 22/254 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G TG LG+ + + E + + V +L L D ++
Sbjct: 6 KVLVTGATGLLGRAVCR---EFQNNSWAVLGIGFRRARSGILRCDL--------TDEEAV 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G L+ +PDV+++CAA P V E ++A+++NV ++ + L+ +
Sbjct: 55 RGL----LQDYKPDVIIHCAAERRPDVVERHTEAAVNLNVHTT--STLAKEAAACGAFFL 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-QTI 183
++STD V++G Y E+D P+NVYG+SK+ E+ CS +LR +++G +T+
Sbjct: 109 YISTDYVFDGRNPPYGEDDAPNPLNVYGRSKLEGERETLRHCSGAVVLRVPVLFGEVETV 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
S ++ W+ V E H + R P RDV + L+ R +D ++ +
Sbjct: 169 S--ESAVTCLWL-RVQEATEGSTLDHCQQRFPTDTRDVAAVCRKLSER-ARQDPSIRGIF 224
Query: 244 NVGGPDRVSRVQMA 257
+ +++++ +MA
Sbjct: 225 HFSAKEQMTKYEMA 238
>gi|116251390|ref|YP_767228.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115256038|emb|CAK07119.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + V ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGVVAQAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKVSAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ +R +++ + ++ +
Sbjct: 155 --FGNNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVADPEPSLRGIF 212
Query: 244 NVGGPDRVSRVQMAE 258
++ G S AE
Sbjct: 213 HLTGSGEASWADFAE 227
>gi|306820758|ref|ZP_07454384.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|402310376|ref|ZP_10829342.1| dTDP-4-dehydrorhamnose reductase [Eubacterium sp. AS15]
gi|304551207|gb|EFM39172.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|400368828|gb|EJP21835.1| dTDP-4-dehydrorhamnose reductase [Eubacterium sp. AS15]
Length = 286
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G LG+ L Q L+ H +DVD
Sbjct: 2 KYLITGANGQLGREL------------------------QKQLNKSDHDLFLYDVDTMDI 37
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ ++ V + +PDV+ NCAA + CEND ++A IN + L+ +E +
Sbjct: 38 TDYNQVEKIVSNIRPDVIFNCAAHTNVDGCENDIENAYKINAIGAQN--LAMISEEIGSK 95
Query: 123 LIHLSTDQVYEGVKSFYK-EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+H STD V+ G + E D + P VYGKSK+ E+ + + CS + I+R++ +YG
Sbjct: 96 FVHFSTDYVFSGEDEIPRIESDFVNPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V L + + +K+ D+ P Y +D+ K+ + L+N
Sbjct: 156 N-NFVRTMLKLS------KQNDKLTVVGDQFGSPTYTKDLAKVAIDLSN 197
>gi|428777837|ref|YP_007169624.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
gi|428692116|gb|AFZ45410.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
Length = 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+DL + + V +K +PD+++N A + E++PD A ++N + V L+ E
Sbjct: 34 DLDLSNLNQIRDV-IKTQKPDLIINSGAYTAVDQAESEPDLAQTLNGDAPRV--LAECAE 90
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
L H+STD V++G K+ Y EED+ P+ VYG+SK+A E I C N+ ILR++
Sbjct: 91 QIGARLFHISTDYVFDGEKNQPYTEEDQPNPIGVYGQSKLAGEVGIQNNCQNYVILRTAW 150
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+YG ++ ++L G E+++ D+ P + D+ + ++ L
Sbjct: 151 VYGTYGKK--------NFVKTMLRLGAEREELKVVSDQVGTPSWTYDIAQAVVGL 197
>gi|149277579|ref|ZP_01883720.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
gi|149231812|gb|EDM37190.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39]
Length = 293
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 25/224 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVD-LK 62
++L+ G G LG H+ Q L ++ + Y + T S +PQ ++ D+ L+
Sbjct: 2 KILITGINGMLGGHIKQSLLSMDMVELYGASRTAASENIPQ--------EYMIGDLTVLE 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPS-SLVNWLSSFTENKEN 121
S + F + DV+V+CAA +CE D A NV S SL+ SF
Sbjct: 54 SYTRFKNIHF-----DVIVHCAAEVNLSLCEKDWAVAELANVTSTSLLTSNLSFDR---- 104
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
I++STD V++G K Y E D+ P+N Y SK+ E + +F +LR++ IYG
Sbjct: 105 -FIYISTDSVFDGSKGNYTETDQTHPLNNYALSKLKGEHVVTSSVGDFIVLRTN-IYGAS 162
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
+P+ SL +W LS+G + + + P+Y+ + II
Sbjct: 163 --NPMRNSL-FEWAYKELSEGRAINGYDNVIFNPLYIGQLTNII 203
>gi|443324888|ref|ZP_21053610.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
gi|442795490|gb|ELS04855.1| dTDP-4-dehydrorhamnose reductase [Xenococcus sp. PCC 7305]
Length = 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 140/322 (43%), Gaps = 67/322 (20%)
Query: 4 KRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++L++G TG +GQ LL Q L E+ +TP Q ++D
Sbjct: 2 KKILLIGSTGQVGQELLTTLQSLGEL------------TTPTRQ-------------ELD 36
Query: 61 L-KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
L K DA+A P+++VN AA + E + AM+IN + V + +
Sbjct: 37 LTKPDEIRDAIASV--SPEIIVNAAAYTAVDKAETESQLAMAINALAPEV--MGEMAQKI 92
Query: 120 ENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+H+STD V++G + YKE+D P+ VYGKSK+ E I +KC + ILR++ +Y
Sbjct: 93 SAKLVHISTDYVFDGQHCTNYKEDDITNPLGVYGKSKLTGELGIRKKCDDHIILRTAWVY 152
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------- 231
G + K++ + ++ ++++ D+ P + D+ I + +
Sbjct: 153 GCKGHGNFVKTML-----RLGAERDELKVVEDQIGTPTWAYDIAAAIANIIEKPTEIPSG 207
Query: 232 -----------W-------LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDI 273
W E +Q+ L + +V + AE Q PA+ +
Sbjct: 208 TYHYTNTGVASWYDFALAIFDEARQLNFPLKI---KKVLPITTAEYPTPAQRPANSILST 264
Query: 274 TKLVQTLNIDPVTYKDGVKLTL 295
TK Q + + P ++D +K L
Sbjct: 265 TKFTQMVGLYPPYWRDSLKKML 286
>gi|291295470|ref|YP_003506868.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279]
gi|290470429|gb|ADD27848.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279]
Length = 283
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 30/255 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V GGTGYLG LL+ S G+P+ + A++ S P A+P + +D++
Sbjct: 2 RVFVTGGTGYLGSTLLRLGS---GRPWVLGASYWSQP------PAVP-GVAWVRLDVRDA 51
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + ALK +P+VV++ A + P + +I V ++ ++ LI
Sbjct: 52 AAVEQ-ALKEFRPEVVIHTA------YSKASPAALEAITVQGTVH--VARACRALGARLI 102
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
HLSTDQ+++G Y E P+ YG++K+ AE ++ I+R+S+I+G +
Sbjct: 103 HLSTDQLFDGENPPYAESAAPNPLTEYGQAKLRAEHWVQAILPTATIVRTSLIWGLNPLD 162
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
V + ++ D G F DE R VYV D+ + + L +L+
Sbjct: 163 -VTSQMVLELADGKREGG----LFSDEYRSFVYVEDLAQALGELVG------LDYAGILH 211
Query: 245 VGGPDRVSRVQMAEV 259
+GG + +SR++ +
Sbjct: 212 LGGAEVLSRLEFGRL 226
>gi|398339499|ref|ZP_10524202.1| dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri serovar Bim
str. 1051]
Length = 222
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 31/238 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L+ G +G LG HL + E K V A + L + LD + ++D
Sbjct: 1 MDLNTILITGASGLLGHHLSKFFLENGNK---VIALRKAHSLGIVGLDEI-------EID 50
Query: 61 LKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L FD V L +P+ +++CA L+ CE + A I++ S V ++
Sbjct: 51 LLD---FDTVKNLLTKIRPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQ 105
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ ++H+STD +++G E+ + PVN+YGK+K +E+ + S ILR++ +
Sbjct: 106 INSKMVHISTDHLWDGTMQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FF 164
Query: 179 GP-----QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
GP Q++S WI + L++ EK+ F+D P+ + + ++IL +
Sbjct: 165 GPGLQWRQSLS--------DWIINSLNRNEKINAFYDVFFTPISIYHLARVILLFIQK 214
>gi|351695278|gb|EHA98196.1| Methionine adenosyltransferase 2 subunit beta, partial
[Heterocephalus glaber]
Length = 234
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V+V+CAA + EN PD+A NV +S L+ LI++S+D V++G
Sbjct: 14 PHVIVHCAAERRSDIVENQPDAASQPNVDAS--GNLAKEAAAVGAFLIYISSDYVFDGTN 71
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+EED A +N+YGK+K+ EK + E A+LR ++YG + + +S D
Sbjct: 72 PPYREEDIPATLNLYGKTKLEGEKAVLENNLRAAVLRIPVLYG--EVEKLEESAVTVMFD 129
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
V + H + R P +V+DV + L + + D ++ + G +++++ +M
Sbjct: 130 KVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRML-DPSIKGTFHWSGNEQMTKYEM 188
Query: 257 A 257
A
Sbjct: 189 A 189
>gi|241204006|ref|YP_002975102.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857896|gb|ACS55563.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAVAEAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE 235
++ ++L E + D+ CP D+ ILA+ +R +++
Sbjct: 155 --FGANFVKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIASRIVAD 203
>gi|331004825|ref|ZP_08328243.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989]
gi|330421356|gb|EGG95604.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989]
Length = 304
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 58 DVDLKSGSGFDAVA---LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
++DL S S D + L F P +VVN AA + E++P A +N S V +L+
Sbjct: 39 ELDLSSISSVDEIVERLLCFQTPSLVVNAAAYTAVDKAESEPSLADKVNHTS--VGFLAQ 96
Query: 115 FTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ LIH+STD V++G + Y E D+++P+ VYG++K E+ + + ILR
Sbjct: 97 YCAKGAIPLIHISTDYVFDGTATTAYTESDDVSPLGVYGETKWLGEQAVKSVLAQHIILR 156
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+S ++G + V L + + E++ D+ CP Y D+ + IL + R+
Sbjct: 157 TSWVFGISGNNFVKTMLRLS------ADREQLTIVSDQYGCPTYAGDIARAILCIVKRYA 210
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAE 258
S + + G +VS + ++
Sbjct: 211 SGQSLNWGVYHCVGEGKVSWYEFSQ 235
>gi|392544063|ref|ZP_10291200.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas piscicida JCM
20779]
Length = 289
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+V++ G TG LG+ L Q LS EI G + AA PL +L D H+ V +D
Sbjct: 3 KVMITGATGLLGRALCQELSSTHEILGCGFSRAAA----PLHKL--DLADHNSVLDFLDN 56
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S P+V+++ AA P CE D + +++NV ++ +L+ ++
Sbjct: 57 HS-------------PEVLIHAAAERRPEQCERDQAATLALNVAAT--EFLAQACRERDI 101
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+STD V++G + Y E D PVN YG++K AAE+ I + I+R ++YG
Sbjct: 102 RFFFISTDYVFDGTSAPYVETDITNPVNFYGQTKQAAERAILADSALHTIVRVPVLYGE- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + I L H R P +V D+ ALT + + +
Sbjct: 161 -VKTLEES-AVTVIAKQLLANPASSHDHWAIRYPTHVNDI-----ALTLKDVIAQPSLSG 213
Query: 242 LLNVGGPDRVSRVQMAEV-DRGVQSP 266
++++ G +++ +MA V + +Q P
Sbjct: 214 IIHISGNQALTKYEMALVMSQALQLP 239
>gi|359457652|ref|ZP_09246215.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris sp. CCMEE 5410]
Length = 304
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 48/287 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA-LPHSFVFFDV 59
M+K R+L++G G LGQ L + L + G+ V +P+ L A LP
Sbjct: 1 MAKSRILLLGAQGQLGQELQKTLPTM-GELIAVGKEAADLAVPEQLHKAILP-------- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD++VN AA + E++ + A ++N + V L+ +
Sbjct: 52 ---------------VQPDIIVNAAAYTAVDQAESEVELAHTVNQKAPTV--LADIAKTV 94
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H+STD V++G +S Y E D P +VYG SK E+ I + ILR++ +Y
Sbjct: 95 GALLVHISTDYVFDGTQSHPYTESDSPNPQSVYGHSKWQGEEGIRHIWNQHIILRTAWVY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
G Q ++ ++L G +V D+ P + +++ I L + W +
Sbjct: 155 GTQGKG--------NFVKTMLRLGRERSEVRVVDDQVGAPTWAKEIGDAIATLIHHWSTS 206
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
D Q ++ G + +RGV S D ++ I Q L +
Sbjct: 207 DPATQ--ADLYGTYHFT-------NRGVASWYDFAVAIFAEAQALGV 244
>gi|284997404|ref|YP_003419171.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5]
gi|284445299|gb|ADB86801.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5]
Length = 274
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 55/297 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +G LG L + L K Y+ L L + D +K
Sbjct: 2 RILLIGASGQLGLELSEVLKGDVIKVYNTKEVQGGYKLD------LTNYLAVKDFIVKK- 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+PDV++N A+L+ CE + A +N + V + + E LI
Sbjct: 55 -----------KPDVIINTASLTDVDKCETEKGEAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG +K+ E + + I S +
Sbjct: 102 HISTDYVFDGEKGLYKEEDLPNPINYYGLTKLLGETYALSYDDSLVIRTSGVFR------ 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L D + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------DYRKTGILN 205
Query: 245 VGGPDRVSRVQMA--------------EVDRGV----QSPADISMDITKLVQTLNID 283
V G +RVSRV +A EVD + + P D S+DI+K + L++D
Sbjct: 206 VAG-ERVSRVDLAIKIKEKFNLPGWVKEVDNVMGWIAKRPFDSSLDISKAKRILSVD 261
>gi|448726613|ref|ZP_21709007.1| dTDP-4-dehydrorhamnose reductase [Halococcus morrhuae DSM 1307]
gi|445793943|gb|EMA44507.1| dTDP-4-dehydrorhamnose reductase [Halococcus morrhuae DSM 1307]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LVVG G LG +++ ++ + ++ T+HST P ++D++
Sbjct: 2 QLLVVGANGLLGSNVI---AKALARDWECTGTYHSTD-PTF-------DIPLHELDVRDT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F + L + D V+NCAA++ CE +P+ A +IN + L+ +++
Sbjct: 51 DRFTTI-LDANEFDTVLNCAAMTDVDGCEENPEHAHAIN--GAAPGELARVCADRDLAFC 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G + Y E P VYG+SK+ E+ + + + R S +YG
Sbjct: 108 HVSTDYVFDGDAERSYTESAPTNPQQVYGESKLTGERTVRKAHDGALLARLSFVYGTHGA 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ P W+ L K E + F D+ P +++ L
Sbjct: 168 TGTLTGFP-AWVSDRLRKAESIPLFTDQTVTPSRAGQAATMLIDL 211
>gi|84872457|gb|ABC67268.1| VldD [Streptomyces hygroscopicus subsp. limoneus]
Length = 294
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 23/254 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +GYL H+ L+ + + V ++ + LP+ + VD+ SG
Sbjct: 4 RILILG-SGYLAGHIAARLTRLGAE--TVLSSRRAPVLPE------SRGVRWKQVDVTSG 54
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +PD VV S CE+ P+ A + + +++ + + LL+
Sbjct: 55 PQVAAL-MDAVEPDAVVAVHGPSDITWCESHPEEAYATH--HGGARNIAAALDGRPVLLV 111
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G Y E + PVN YG++K+AAE+ + + S +LR S++YG +
Sbjct: 112 --STDNVFSGEDESYGESAQTFPVNAYGRAKLAAERELLDTSSAL-VLRVSLVYGWEDRG 168
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P P L + S++ K E++ D PV+V DV L +S + L+
Sbjct: 169 PRPNFL-TSVVRSLMRK-EQLRIPDDHWNTPVHVEDVAAWATTL----MSSGRTGT--LH 220
Query: 245 VGGPDRVSRVQMAE 258
+GGP R+ RV A
Sbjct: 221 LGGPRRIGRVDWAR 234
>gi|427729722|ref|YP_007075959.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
gi|427365641|gb|AFY48362.1| dTDP-4-dehydrorhamnose reductase [Nostoc sp. PCC 7524]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +L++G G +GQ + Q LS HH +++ A P VDL
Sbjct: 3 KSILLLGSNGQVGQEIQQLLSP-----------HH-----KIIPVARP------TVDLTQ 40
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ QP +++N AA + E +P+ A +IN + + ++ ++ + L
Sbjct: 41 PENLRPI-IRDTQPQIIINAAAYTAVDKAETEPELATTINATAPQI--IAEESQKLGSFL 97
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IHLSTD V++G +S Y+E D P+NVYGK+K+A E I + + ILR++ +YG
Sbjct: 98 IHLSTDYVFDGQQSHPYQETDTTNPLNVYGKTKLAGEIAIGQTHPDHIILRTAWVYGSFG 157
Query: 183 ISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKII 225
S ++ ++L G +++ D+ P + +D+ +I
Sbjct: 158 KS--------NFVKTMLRLGKERQEIRVVADQIGSPTWAQDIADVI 195
>gi|386836368|ref|YP_006241426.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|76262890|gb|ABA41505.1| dTDP-4-dehydrorhamnose reductase [Streptomyces hygroscopicus subsp.
jinggangensis]
gi|374096669|gb|AEY85553.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451789726|gb|AGF59775.1| dehydrogenase [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 324
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 23/254 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +GYL H+ L+ + + V ++ + LP+ + VD+ SG
Sbjct: 34 RILILG-SGYLAGHIAARLTRLGAE--TVLSSRRAPVLPE------SRGVRWKQVDVTSG 84
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +PD VV S CE+ P+ A + + +++ + + LL+
Sbjct: 85 PQVAAL-MDAVEPDAVVAVHGPSDITWCESHPEEAYATH--HGGARNIAAALDGRPVLLV 141
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G Y E + PVN YG++K+AAE+ + + S +LR S++YG +
Sbjct: 142 --STDNVFSGEDESYGESAQTFPVNAYGRAKLAAERELLDTSSAL-VLRVSLVYGWEDRG 198
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P P L + S++ K E++ D PV+V DV L +S + L+
Sbjct: 199 PRPNFL-TSVVRSLMRK-EQLRIPDDHWNTPVHVEDVAAWATTL----MSSGRTGT--LH 250
Query: 245 VGGPDRVSRVQMAE 258
+GGP R+ RV A
Sbjct: 251 LGGPRRIGRVDWAR 264
>gi|409204080|ref|ZP_11232279.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas flavipulchra
JG1]
Length = 289
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 33/275 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLS---EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+V++ G TG LG+ L Q LS EI G + AA PL +L D H+ V +D
Sbjct: 3 KVMITGATGLLGRALCQELSSTHEILGCGFSRAAA----PLHKL--DLADHNSVLDFLDS 56
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S P+V+++ AA P CE D + +++NV ++ +L+ ++
Sbjct: 57 HS-------------PEVLIHAAAERRPEHCERDQAATLALNVAAT--EFLAQACRERDI 101
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+STD V++G + Y E D PVN YG++K AAE+ I + I+R ++YG
Sbjct: 102 RFFFISTDYVFDGTSAPYVETDITNPVNFYGQTKQAAERAILADSALHTIVRVPVLYGE- 160
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + I L H R P +V D+ +LT + + +
Sbjct: 161 -VKTLEES-AVTVIAKQLLTNPASSHDHWAIRYPTHVNDI-----SLTLKDVIAQPSLGG 213
Query: 242 LLNVGGPDRVSRVQMAEV-DRGVQSPADISMDITK 275
++++ G ++ +MA+V + +Q P M +++
Sbjct: 214 IIHISGNQAFTKYEMAQVMAKALQLPTQDLMPLSQ 248
>gi|282601176|ref|ZP_05981009.2| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum
variabile DSM 15176]
gi|282569884|gb|EFB75419.1| NAD dependent epimerase/dehydratase family protein [Subdoligranulum
variabile DSM 15176]
Length = 281
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G+LG +LQ L+ +L L LPH + ++G
Sbjct: 3 RVLLTGAGGFLGARILQQLAG------------------RLELLTLPHGLM-----ARAG 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ PD +++ AALS CE P+ + NV WL+ L+
Sbjct: 40 QEELREAVARLHPDAILHTAALSDTGYCEAHPEESYRANVEVPF--WLAEAARAAGAKLV 97
Query: 125 HLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-PQ 181
S+DQVY G++ + E ++P NVYG+ K AE+ + + +LR++ +Y P
Sbjct: 98 AFSSDQVYAGLQEHGPFTENTPLSPANVYGRHKREAEQRVLDILPGAVLLRATWLYDLPG 157
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
P+ +LP+ + + + GE + F + R Y R V+ +L
Sbjct: 158 YGLPIRGNLPLNLLRAART-GEVLRFSRRDYRGVTYARQAVEALL 201
>gi|448599699|ref|ZP_21655502.1| RmlD substrate binding domain superfamily protein [Haloferax
alexandrinus JCM 10717]
gi|445736372|gb|ELZ87916.1| RmlD substrate binding domain superfamily protein [Haloferax
alexandrinus JCM 10717]
Length = 216
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 112 LSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L++ +++E +H STD V++G SFY+E+DE AP+ YG+SK+A E + + ++
Sbjct: 11 LAAVCDDREIPFVHYSTDYVFDGETDSFYEEDDEPAPIQEYGRSKLAGENAVRDVNTDAL 70
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
ILR S +YG + + P QW+ S L+ GE V F D+ P +V L L
Sbjct: 71 ILRLSFVYGARGDTSDLVGFP-QWVASTLAAGETVPLFTDQTMTPSRAGNVATTTLEL 127
>gi|407774429|ref|ZP_11121727.1| dTDP-4-dehydrorhamnose reductase [Thalassospira profundimaris
WP0211]
gi|407282471|gb|EKF08029.1| dTDP-4-dehydrorhamnose reductase [Thalassospira profundimaris
WP0211]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 32/226 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKS 63
++LV G G L L AA+ H P QL +FV + DL+
Sbjct: 3 KILVFGKNGQLASCL--------------AASAHEFPDAQL-------TFVGREECDLED 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + V + QPD+VVN AA + + E + A +N + V ++ + L
Sbjct: 42 ASQIEPVIDRL-QPDIVVNAAAYTAVDLAEQQENIAFKVNFDA--VRAMAQALAKRAIPL 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + Y+EEDE++P+ VYG SK+A E + E I+R+S +Y
Sbjct: 99 IHVSTDYVFDGKGTRPYREEDEVSPLGVYGNSKLAGEVAVREAHQKHLIVRTSWVY---- 154
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ + +++++ ++V D+ CP D+ IL L
Sbjct: 155 -SQFGKNF-VKTMLNLMAQRDEVRIVDDQTGCPTSAHDLAHAILEL 198
>gi|342217258|ref|ZP_08709905.1| putative dTDP-4-dehydrorhamnose reductase [Peptoniphilus sp. oral
taxon 375 str. F0436]
gi|341588148|gb|EGS31548.1| putative dTDP-4-dehydrorhamnose reductase [Peptoniphilus sp. oral
taxon 375 str. F0436]
Length = 296
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P V++NCA +S + CE DPD A +N + L+ + LIH+STD V+ G
Sbjct: 67 PTVIINCAGMSSAKACEKDPDEAFRVNALGA--KNLAIAANHYGARLIHISTDDVFNGKD 124
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
E E P+ VYGK+K EKFI E + I+RSS +Y +TI+ + KSL
Sbjct: 125 DTPVNEMVEPKPITVYGKTKHLGEKFIQEFTQKYFIVRSSWVYDLRTIAKIEKSL 179
>gi|397689379|ref|YP_006526633.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
gi|395810871|gb|AFN73620.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
Length = 287
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
VD+ + + L F PD V+N AA + E + + A +NV V L+ ++
Sbjct: 38 VDITDKNSVKKIILDFF-PDFVINAAAYTNVDKAETEREEAWKLNVTG--VENLAFYSWT 94
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ LIH+STD +++G Y E D P++ YG++K+AAE I + ILR++++Y
Sbjct: 95 IDAHLIHISTDYIFDGKNGPYIETDRPCPISYYGRTKLAAENSIRANGVRYTILRTNVLY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
GP + K ++W+ + L + + + D+ P + D+ I A T + E
Sbjct: 155 GP---AKGGKPDFVKWVINSLKENKVINIVTDQFNNPTFTDDLANAI-AKTIEFRKEG-- 208
Query: 239 MQLLLNVGGPDRVSRVQMAE 258
+ N+GG + +SR + +
Sbjct: 209 ---IYNIGGKEILSRYEFTQ 225
>gi|206900982|ref|YP_002250211.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12]
gi|206740085|gb|ACI19143.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12]
Length = 281
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 40/235 (17%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
KKR+L+ G G+LGQ+ ++ + E P TH D++L+
Sbjct: 2 KKRILITGAKGFLGQYFVKEFEDEEVIP----ITHQ-------------------DINLE 38
Query: 63 SGSGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKE 120
+ + + +LK PD+V++ AA+ P +CE DP+ A +N V + V S +
Sbjct: 39 DKNAIEKITSLK---PDLVIHPAAIRSPDICEEDPEKAWKVNAVGTKHVAIACSLLDIP- 94
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LI++STD V+ G K Y E P+N+YGK+K+ E F E C I+R+S ++G
Sbjct: 95 --LIYISTDYVFSGGKDTPYTEFYPPNPINLYGKTKLYGEIFTKEFCKKHFIIRTSYVFG 152
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII--LALTNRW 232
+ + + I + L +G++++ + Y +D+V+ + L+ TN +
Sbjct: 153 EYGNNALTQ------IYNSLKEGKEIKLSNYHFASCTYAKDLVRKVKELSFTNLY 201
>gi|325970219|ref|YP_004246410.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
gi|324025457|gb|ADY12216.1| dTDP-4-dehydrorhamnose reductase [Sphaerochaeta globus str. Buddy]
Length = 299
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G G LG L + L E + ++ + + + + +D L D+ +
Sbjct: 3 ILITGAKGQLGNELCRILGEGVSERGELPLFYERSRIVAVDVDEL---------DITTSD 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
D+ +P++V NCAA++ CE + D+A +N P +L + E L
Sbjct: 54 AVDSF-FALHKPNLVFNCAAMTNVDGCEGNEDAAYLVNAVGPKNL----AVACERHGARL 108
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V++G+ + Y E DE AP YG+SK+A E+F+ C N I R++ +YG
Sbjct: 109 MHISTDYVFDGLGTRPYVETDEPAPNTAYGRSKLAGERFVLASCRNSCICRTAWLYG 165
>gi|332705309|ref|ZP_08425387.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
gi|332355669|gb|EGJ35131.1| dTDP-4-dehydrorhamnose reductase [Moorea producens 3L]
Length = 296
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G TG +GQ L LS PL Q++ D+DL
Sbjct: 2 KKILLTGITGQVGQELEDTLS----------------PLGQVI------GVGRSDMDLAE 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V + +PDV+VN AA + E + A SIN + + ++ +N +L
Sbjct: 40 PESIRQVIHQI-KPDVIVNAAAYTAVDKAETELALAKSINAVAPTI--MAEEAQNLGAIL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G K+ Y E+D P+ YGKSK+ E+ + +KC ILR++ +YG +
Sbjct: 97 LHISTDYVFDGKKNTPYTEQDTPNPIGSYGKSKLQGEEGVQQKCDRILILRTAWVYGTRG 156
Query: 183 ISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
++ ++L G E++ D+ P + +D+ I L
Sbjct: 157 HG--------NFVKTMLRLGAEREELRVVADQVGTPTWAKDIAVTITQL 197
>gi|386812185|ref|ZP_10099410.1| dTDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
gi|386404455|dbj|GAB62291.1| dTDP-4-dehydrorhamnose reductase [planctomycete KSU-1]
Length = 285
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 47/292 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+G G LG++L+ LS + HS + +++ + H VD+
Sbjct: 2 KILVIGSDGMLGRYLVNYLSNLS----------HSKSISEVI--GVNHK----QVDITHH 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +P+ ++NCAA + CE A ++N + L++ ++ E +I
Sbjct: 46 SDTSRLIAHI-RPNTIINCAAFTNVDACETQIPVAFAVNAAGAKNIALAA--KHAEAKVI 102
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+STD V++G K+ Y E D+ P++VYGKSK+A E I E N+ I+R++ ++GP
Sbjct: 103 QISTDYVFDGTKNEPYIETDQTNPISVYGKSKLAGELAIQEILDNYIIIRTAWLFGPWRR 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-KQMQLL 242
+ V L + K V D+ P Y ++ I + +S D + + +
Sbjct: 163 NFVTTMLDLG------KKNRSVSVVTDQYGSPTYTANLSHAIGTM----ISLDLRGLYHI 212
Query: 243 LNVGGPDR----------------VSRVQMAEVDRGVQSPADISMDITKLVQ 278
N G R V V+ A+ R P + S++ TK Q
Sbjct: 213 TNSGTCSRYEWAKKIFELTDSSVSVLPVKTADYKRAAMVPQNSSLNCTKYTQ 264
>gi|91202893|emb|CAJ72532.1| similar to TDP-rhamnose synthetase, NAD(P)-binding [Candidatus
Kuenenia stuttgartiensis]
Length = 330
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 27/283 (9%)
Query: 23 LSEIEGKPYDVAATHHSTPLPQLLLDALPHSFV------FFDVDLKSGSGFDAVALKFGQ 76
++ + G P A H + P+ ++ P + +D++ G A+ +K +
Sbjct: 11 ITGVNGVPGYNAFRHFHSQYPEHVVAIRPTRYWPLRGEGIIPLDIEDVQGLAAL-MKTWK 69
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
+ +++ A + CE +P+ A +NV S+ N L + LL LSTD V+ G
Sbjct: 70 FNSILHAAGSCALKSCELNPEMAYRVNVQSA-KNILKIIGDRTIRLLF-LSTDLVFPGKS 127
Query: 137 S-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y E D ++PV VYGK+ V AE+ I + + I R S+ P IS + I WI
Sbjct: 128 SGCYTESDAVSPVTVYGKTMVMAEEIIAHEYPSAVIFRISL---PMGISVNGHAGAIDWI 184
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKII-LALTN-----------RWLSEDKQMQLLL 243
S K ++DE R P Y D I +AL N R+LS + Q++
Sbjct: 185 LSRFKKNNPATLYYDEIRSPFYCEDFNSIAEIALENKICGIYHLGSHRYLSLYQIGQIVN 244
Query: 244 NVGGPDRVSRVQMAEVDRGVQSP--ADISMDITKLVQTLNIDP 284
VGG ++ G P +++M KL+ L DP
Sbjct: 245 KVGGYSPRLLKGCMRIEAGPMPPRAGNVAMSNKKLLAALGFDP 287
>gi|127514272|ref|YP_001095469.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4]
gi|126639567|gb|ABO25210.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4]
Length = 307
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 118/242 (48%), Gaps = 30/242 (12%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+V+++CAA P V E DP++A ++N+ ++ L+ + L ++STD V++G
Sbjct: 59 KPEVILHCAAERRPDVSERDPEAAKALNLAAT--RQLAQAAKANGAWLCYISTDYVFDGT 116
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y EED+ P+N YG++K E+ + E FA+LR I+YG + + +S + +
Sbjct: 117 SPDYGEEDQTYPLNFYGETKREGEQALIEVSREFAVLRLPILYG--RVESLDESAVLVML 174
Query: 196 DSVLSKGEKVEFFHDE--CRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
+++ +V D+ R P D+ ++ L R + + + + G +R+++
Sbjct: 175 KQLVN---QVPTQQDDWAVRSPTSTLDIANALVKLVARQ-QQAGDVAGIYHFTGTERMTK 230
Query: 254 VQ----MAEVDRGVQS---------------PADISMDITKLVQTLNIDPVTYKDGVKLT 294
Q MAE+ G+ S P D S+ + +L + ++ GVK +
Sbjct: 231 YQMLLKMAEI-MGLSSKHISPQSSPSDLAKRPKDCSLSMARLKSLAIKSEIDFEQGVKYS 289
Query: 295 LA 296
L+
Sbjct: 290 LS 291
>gi|190891197|ref|YP_001977739.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 652]
gi|190696476|gb|ACE90561.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CIAT 652]
Length = 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSAQRPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAIAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE--------- 235
++ ++L E + D+ CP D+ ILA+ R +++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTF 212
Query: 236 --------------DKQMQLLLNVGGPD-RVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
+ LL GG + V R+ A+ + PA+ ++ KL T
Sbjct: 213 HLTGSGEASWADFAEAIFAALLKSGGKNVGVERIPTADYPTPAKRPANSRLNGDKLATTY 272
Query: 281 NIDPVTYKDGVKLTL 295
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|186684650|ref|YP_001867846.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
gi|186467102|gb|ACC82903.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102]
Length = 296
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 88/155 (56%), Gaps = 8/155 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++ QP +++N AA + E++P+ A +IN + L+ ++ ++ LIH+STD V
Sbjct: 48 IRSKQPQIIINAAAYTAVDKAESEPELASAINATAPLI--IAQESQKLGAFLIHISTDYV 105
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G Y+E D P++VYGK+K+A E+ I E C++ ILR++ +YG KS
Sbjct: 106 FDGNGYRPYQETDATNPLSVYGKTKLAGEEAIRETCAHHLILRTAWVYG-----TFGKSN 160
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
++ + + ++ +++ D+ P + +D+ +I
Sbjct: 161 FVKTMLRLGAERQELRVVADQIGSPTWAQDIATVI 195
>gi|387906721|ref|YP_006337058.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. KJ006]
gi|387581613|gb|AFJ90327.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. KJ006]
Length = 314
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 133/333 (39%), Gaps = 57/333 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ +L++G +G LG+ + LS E VA ++ + P DV
Sbjct: 1 MSQPTILLIGASGLLGRAVAAALSR-EASLTLVATIRNADTAGARRVALPPEHTARLDV- 58
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCENDP +A +INV + + +
Sbjct: 59 ------LDQPALERLFDARRPSAVIVCAAERRPDVCENDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPL 170
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSK------------GEKVEFFHDECRCPVYVRDVVKI 224
+YGP + W +S ++ E R P Y DV ++
Sbjct: 171 LYGPI----------VDWRESAVTSLVPAIVAAAQPGAEPARMDAWAIRYPTYTPDVAQV 220
Query: 225 ILALTNR------------WLSE------DKQMQLLLNVGGPDRVSRVQMAEVDRGVQSP 266
I LT R W +E D +L +G R + + P
Sbjct: 221 IRDLTLRHLAGAPVTGIRHWSAEEPMTKYDIAQRLAAALG--HRAALAPIHAPTDATPRP 278
Query: 267 ADISMDITKLVQTLNIDPVTYKDGVKLTLAAEA 299
D +D ++ V+ L ID T D L + A+A
Sbjct: 279 YDCHLDASR-VRALGIDHATPFDAGLLAVLADA 310
>gi|380478611|emb|CCF43499.1| RmlD substrate binding domain-containing protein [Colletotrichum
higginsianum]
Length = 317
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ K V+V G TG LG+ + + E + ++V T S F VD
Sbjct: 1 MAGKNVVVTGATGLLGRQVARAF---ELRSWNVKGTGFSRA----------DGVSVFKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S + L +P VVV+CAA P ++DPD+A ++NV ++ L++ +
Sbjct: 48 LGNTSEVEKF-LDESKPQVVVHCAAQRFPDKVDSDPDAARALNVAAT--KSLANLCAARS 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E+ +L
Sbjct: 105 TLLIYISTDYVFSGKPGEAPYEADAPTGPTNLYGQTKLDGELAVLEEYKAAGLEGLGLVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG + +P + I +D++ + KV+ H R P DV ++ +
Sbjct: 165 RVPVLYG-KAHTPAESATNI-LMDTLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDIA 222
Query: 230 NRWL--SEDKQMQLLLNVGGPDRVSRVQMAEV 259
++L S+ M +L D++++ ++ +
Sbjct: 223 GKYLEASDRSSMPKVLQFSSEDKMTKYEICQT 254
>gi|254167999|ref|ZP_04874847.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|289595932|ref|YP_003482628.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|197623042|gb|EDY35609.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|289533719|gb|ADD08066.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
Length = 283
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 32/229 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V ++G G LG L++ EI + PL LD
Sbjct: 2 KVAIIGANGQLGSDLVEVFGEI------------AVPLTHRDLDV--------------- 34
Query: 65 SGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +D++ LK PDV++N AA E +P A ++N +L +++ + +
Sbjct: 35 TNYDSLKILKKIDPDVIINTAAYVRVDDAEKEPKKAFNVNAIGAL--YVAKIANKLDAIN 92
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y EED P+NVYG SK E F + I+R + +YG +
Sbjct: 93 VYISTDYVFDGRKGAPYTEEDMPNPINVYGASKYMGEIFTRNYSKKYYIVRVASLYGKKG 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ + WI +GE+++ D P Y RDV + + L R
Sbjct: 153 ARGKGGNF-VNWIIEKARRGEEIKVVDDIIMSPTYTRDVAETLKKLLER 200
>gi|240948931|ref|ZP_04753287.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305]
gi|240296746|gb|EER47357.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305]
Length = 292
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 35/261 (13%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
++D+ S + F +PDV++N AA + E++ + + +INV +L+
Sbjct: 34 ELDITDQSAVKKIVKTF-KPDVIINAAAHTAVDRAESEVELSEAINVKGP--QYLAEAAN 90
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+++H+STD V+EG S YKE+D+ P VYG++K+A E + + S ILR++
Sbjct: 91 EIGAMILHISTDYVFEGTGSGEYKEDDQTNPQGVYGRTKLAGEIAVQQANSRSIILRTAW 150
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
++G + V L + + + D+ P Y D+ K ++ + N+ L+
Sbjct: 151 VFGEHGHNFVKTML------RLAKDRDSLGIVGDQFGGPTYAGDIAKTLIEIANQILAGK 204
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVDRG-------------------------VQSPADISM 271
+ + + G VS + A+ + PA+ +
Sbjct: 205 EDAFGVYHFTGKPYVSWYEFAKAIFAEAELQNILEKSPLVNSIATSDYPTPAKRPANSRL 264
Query: 272 DITKLVQTLNIDPVTYKDGVK 292
D+TK+ Q NI+P ++ +K
Sbjct: 265 DLTKIKQVFNIEPSNWQKALK 285
>gi|313115158|ref|ZP_07800643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622524|gb|EFQ05994.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 305
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG +L+ L E P+P+ LL+A + D+D+ +
Sbjct: 2 KIIVTGCKGQLGTEILKQLRE---------GRSEIGPVPEKLLNATVIAVDLPDLDISNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PDV++NCAA + CE + D+A N P +L + E
Sbjct: 53 KMVDEF-IRRNRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNL----AQAAEKTGAR 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ + C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGVAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ IL L
Sbjct: 167 ----SYYGKNF-VKTIVNAGKKFGKLEVVNDQCGNPTNAVDLAHEILQL 210
>gi|225163945|ref|ZP_03726235.1| dTDP-4-dehydrorhamnose reductase [Diplosphaera colitermitum TAV2]
gi|224801438|gb|EEG19744.1| dTDP-4-dehydrorhamnose reductase [Diplosphaera colitermitum TAV2]
Length = 314
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 44/260 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL V G H G IEG AA H F +DL
Sbjct: 26 RVLAVPGPA----HARAGFGPIEG-----AARH-------------------FTLDLAEP 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
VAL PD +VNCAA++ P CE DP + +NV L L+ + I
Sbjct: 58 GAVTTVALDL-FPDAIVNCAAIAEPARCEADPVLSQRLNV--ELPLELARVAHHMSARFI 114
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYGPQTI 183
H+S++QV++G + Y +P+N+YG+ K+ +E+ + F A++R+ ++ G
Sbjct: 115 HVSSEQVFDGTRPPYAIGSPPSPINLYGRQKLESERAVTHAAPEFAAVVRAPLLTGNSLT 174
Query: 184 S--PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + L W + G F DE R P ++ +++L L R M+
Sbjct: 175 GTRSLHEKLFADW-----AAGRAPRLFADEFRQPCTAENLAEVLLELCER-----PAMRG 224
Query: 242 LLNVGGPDRVSRVQMAEVDR 261
+ + G + +SR +A R
Sbjct: 225 VYHWAGAEVLSRHDIARRIR 244
>gi|451947382|ref|YP_007467977.1| dTDP-4-dehydrorhamnose reductase [Desulfocapsa sulfexigens DSM
10523]
gi|451906730|gb|AGF78324.1| dTDP-4-dehydrorhamnose reductase [Desulfocapsa sulfexigens DSM
10523]
Length = 293
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 38/183 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF---DVDL 61
++L+ GG G LGQ DV + LLDA H + +D+
Sbjct: 2 KILICGGHGQLGQ--------------DVGS----------LLDA-DHEVMSCGSRQLDI 36
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENK 119
+ S ++ + QPD+V+NCAA + CE + A +N P +L + E
Sbjct: 37 SNTSQVASIFSNY-QPDIVINCAAYTAVDKCETETQLAWQVNATGPENL----ARQAEET 91
Query: 120 ENLLIHLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
LIH+STD V++G K+ Y E++++AP++ YG+SK+A E+ I SN+ ILR++
Sbjct: 92 GARLIHISTDYVFDGKKTATESYSEDEDVAPLSEYGRSKLAGEQAIEAYSSNYLILRTAW 151
Query: 177 IYG 179
+YG
Sbjct: 152 LYG 154
>gi|218197439|gb|EEC79866.1| hypothetical protein OsI_21362 [Oryza sativa Indica Group]
Length = 170
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +KRVLVVGG+GYLGQHLL L+ G DVA THH PQ LL ALP F VD
Sbjct: 1 MERKRVLVVGGSGYLGQHLLAALA--AGGEVDVAFTHHRDTPPQPLLHALP-GLRAFRVD 57
Query: 61 LKSGSGFDAVALKFGQ 76
L+SG G AV+ FGQ
Sbjct: 58 LRSGDGLRAVSESFGQ 73
>gi|119947065|ref|YP_944745.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
gi|119865669|gb|ABM05146.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
Length = 294
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 32/263 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G +G L + L + T L LD+ +D+
Sbjct: 2 RVLITGSKGQVGHCLTEQL-------------RNYTDAQFLALDSKG-------LDITDQ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S AV +F +P +++N AA + E++ D A +IN + +L+ ++ +++
Sbjct: 42 SAVQAVVNEF-KPTIIINAAAYTAVDRAEDESDLAYAINRDGA--KYLAEAAQSVNAVIL 98
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K Y E D +P +YG+SK+A EK + E CS ILR++ ++G
Sbjct: 99 HISTDYVFSGDKEGMYTEADLTSPQGIYGESKLAGEKAVIEACSRHIILRTAWVFGEHGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + D +
Sbjct: 159 NFVKIMLRLAKTHDTLG------IVGDQFGGPTYAGDIASALVTVAKTLSNGDNDKYGIY 212
Query: 244 NVGGPDRVSRVQMAEV--DRGVQ 264
+ G VS Q A+ D VQ
Sbjct: 213 HYSGFPHVSWSQFAQAIFDEAVQ 235
>gi|311745813|ref|ZP_07719598.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1]
gi|126576015|gb|EAZ80293.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1]
Length = 311
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 21/258 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHS-FVFFDV 59
++KK++ + G G LGQ L+ L +E ++V LP F + +
Sbjct: 8 VNKKKLFITGVNGLLGQKLVAQL--LEKDEFEVIGCGKGES-------RLPFGGFKYVSL 58
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ + V L +PD++++ AA++ CE + ++A NV ++ ++L +E
Sbjct: 59 DITDEAKVQEV-LSEIKPDILIHGAAMTNVDECELNQEAAYDANVNAT--SYLLQASEKL 115
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I +STD ++ G + EE PVN YG++K+ AE+ + +AI R+ +++G
Sbjct: 116 NTHFIFVSTDFIFSGEEGPLDEEAIAKPVNYYGETKLKAEQLVMNSTFKWAIARTVLVFG 175
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S I W+ S L G+ ++ D+ R P D+ + L ++
Sbjct: 176 --IAHDMSRSNIILWVKSSLESGKNIQVVDDQYRTPTLAEDLAAGCI------LIAEQGA 227
Query: 240 QLLLNVGGPDRVSRVQMA 257
+ + N+ G D ++ +MA
Sbjct: 228 EGVYNISGSDFMTPYEMA 245
>gi|183597262|ref|ZP_02958755.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827]
gi|188023577|gb|EDU61617.1| dTDP-4-dehydrorhamnose reductase [Providencia stuartii ATCC 25827]
Length = 297
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 22/175 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L PL +L+ AL + DL
Sbjct: 2 KILLLGKNGQVGWELQRAL----------------LPLGELI--ALDRHSKDYCGDLSKL 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ A ++ QPDV+VN AA + E++PD + IN S V L+ E LLI
Sbjct: 44 NDL-AETIELLQPDVIVNAAAYTAVDKAESEPDVSKLIN--SEAVKILAQCAEKVNALLI 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V+ G + F+ E+D+ + +N+YG++K+ E++I + C N ILR+S +Y
Sbjct: 101 HYSTDYVFSGEGEHFWNEDDQTSALNIYGQTKLEGEQYIQKYCPNHLILRTSWVY 155
>gi|414077754|ref|YP_006997072.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
gi|413971170|gb|AFW95259.1| dTDP-4-dehydrorhamnose reductase [Anabaena sp. 90]
Length = 295
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++ QP++++N AA + E++P++A IN + + ++ ++ + LIHLSTD V
Sbjct: 48 IRETQPEIIINAAAYTAVDKAESEPENAHLINTVAPQI--IAEESQKLGSFLIHLSTDYV 105
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G + Y+E D P++VYG++K+A E I + C + ILR++ +YG S
Sbjct: 106 FNGNSHYPYRETDSTNPLSVYGQTKLAGEIAIQQNCPHHIILRTAWVYGTYGKS------ 159
Query: 191 PIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
++ ++L G+ +V D+ P + +D+ I + + SE+ + N G
Sbjct: 160 --NFVKTMLRVGQERSEVRVVADQIGSPTWAQDIASTITQIIPQLTSENAGIYHYTNSG 216
>gi|406880071|gb|EKD28510.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 291
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 22/223 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V+G +G++G ++ + L + K +H++ L +L ++ + +L+
Sbjct: 2 IIVIGASGFIGSYIYENLKSKKYKLTGTYNSHYTNGLVKLNIE---------NDNLRD-- 50
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
LK + V CA+ S EN+ ++ ++NV S L + + K +
Sbjct: 51 -----VLKNYNIKIAVICASESSISKIENEKNNFHNVNVNSQ--KQLLEYFKEKNIKPVF 103
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
+S+D +Y+G + Y E+D+ P+N+YGK K+ E FI +NF I+R S +Y ++ +
Sbjct: 104 ISSDNIYDGNEGDYCEDDKRNPLNIYGKQKLEIENFIVSHFNNFLIVRLSKVYSSKSEN- 162
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
K+ WI+S+ S G + D P +V D+ II L
Sbjct: 163 --KNFITDWINSLYS-GNTLNLATDRVISPTHVIDIANIIEIL 202
>gi|379718540|ref|YP_005310671.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus 3016]
gi|378567212|gb|AFC27522.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus 3016]
Length = 283
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+++CAA + E+D D A +N + +++ E + L ++STD V++G
Sbjct: 50 RPDVIIHCAAYTAVDQAESDVDGAYLVNAVGT--RNMAAAAEKVGSKLCYISTDYVFDGK 107
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D+ P +YGKSK A E+ CS + I+R+S +YG + V L +
Sbjct: 108 GTSPYREYDKTNPSGIYGKSKEAGEQLAMSLCSRYFIVRTSWVYGLHGNNFVKTMLKLS- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
++++ HD+ P + D+ +LAL N
Sbjct: 167 -----EDRDRLKVVHDQIGSPTFTEDLAGFLLALVN 197
>gi|240144746|ref|ZP_04743347.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82]
gi|257203267|gb|EEV01552.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82]
Length = 291
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 3 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 36
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 37 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 93
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 94 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 152
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 153 IFRTAWLYG 161
>gi|388856639|emb|CCF49756.1| related to Vacuolar protein sorting-associated protein VPS5
[Ustilago hordei]
Length = 1318
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 116/233 (49%), Gaps = 28/233 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ + Q ++ K YD A + P+ L +DL
Sbjct: 2 KVLITGASGLLGRAVHQQCNQ---KGYDTKALAFTRSDPEKQL---------VKLDLTDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
+ ++ +F QPDV+V+ AA E DP ++ +INV P+S+ S + L
Sbjct: 50 TALESCLREF-QPDVIVHTAAERRSDFVEKDPAASHAINVDAPASIAMLASKL--DHVPL 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE--KCSNFAILRSSIIYGP 180
LI++STD V++G K YK +D P+N YG K+ E+ + E K +F LR I+YG
Sbjct: 107 LINISTDYVFDGFKPPYKVDDAPNPLNAYGVGKLQGERAVAENAKPGHFTNLRVPILYG- 165
Query: 181 QTISPVPKSLPIQWIDSVL-----SKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+TI+ ++ + +D++ + +K + + R P V DV K IL L
Sbjct: 166 KTITNNESAVNV-LLDAIQPPAGSTTPKKCDAY--AVRYPTNVGDVAKAILKL 215
>gi|336421633|ref|ZP_08601789.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000104|gb|EGN30257.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium
5_1_57FAA]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG+ PDV++NCAA++ VCE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGEINRPDVIINCAAVTDTDVCEREPELAFRVNALGA--RNLSIVARKVGAKMVQLST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ K+ Y E D+ P VYG+SK A E ++ E I+RS+ +YG Q + V
Sbjct: 103 DDVFDGLSKTPYSEFDDTNPKTVYGRSKRAGENYVKEFTHKHFIIRSNWVYG-QGNNFVT 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRW 232
K L +G + D+ P +D+ +IIL L TN +
Sbjct: 162 KVL------DAADEGRTLAVASDQFGSPTSAKDLARIILYLIPTNEY 202
>gi|196005271|ref|XP_002112502.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens]
gi|190584543|gb|EDV24612.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens]
Length = 298
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 44/315 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---VD 60
K+VL+ G +G LG+ + + +D AT L +S D VD
Sbjct: 2 KKVLITGASGLLGRAI--------KREFDNDATWKVL--------GLAYSRAGGDLRRVD 45
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + V +F QPDV+V+ AA P + + D A +NV S L + T N
Sbjct: 46 LSDVNAVKEVVREF-QPDVIVHAAAERRPDIVDKKTDVARQLNVDVSRNLALIAKTFN-- 102
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYG 179
++++STD V++G Y+ D+ AP+N YG K EK + E ILR I+YG
Sbjct: 103 CFILYVSTDYVFDGCNPPYQPADQPAPLNTYGMLKWQGEKAVLETYPKRSGILRLPILYG 162
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + +S + ++ + + E E R P YV DV +I ++++ L +D+
Sbjct: 163 --EVEYLEESAVTVLLKAIQNGNKPGEMSDYEKRYPTYVGDVAVVIRQISDKTL-QDENF 219
Query: 240 QLLLNVGGPDRVSRVQMA-------EVDR-----------GVQSPADISMDITKLVQTLN 281
+ + G + +++ QMA +D G + P + +DI+ L Q
Sbjct: 220 YGIWHWSGLEELTKYQMALKIAKAFNIDYKHLVAVNKPSPGAKRPYNSHLDISTLTQLNF 279
Query: 282 IDPVTYKDGVKLTLA 296
+++DG+ ++L+
Sbjct: 280 GQQTSFQDGIMISLS 294
>gi|291534624|emb|CBL07736.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis M50/1]
Length = 290
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 2 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 35
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 36 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 92
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 93 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 151
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 152 IFRTAWLYG 160
>gi|399039912|ref|ZP_10735366.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF122]
gi|398061797|gb|EJL53583.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF122]
Length = 298
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 8/152 (5%)
Query: 28 GKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALS 87
GK V H T LP + AL D+D+++ A+ L+ PD++VN AA +
Sbjct: 7 GKNGQVGRELHRTLLPLGAVTALERR----DIDMEATETLPAI-LEEHAPDLIVNAAAWT 61
Query: 88 VPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIA 146
E+ P++A +N + + ++ F ++ L+H STD V++G K Y E D+
Sbjct: 62 QVDRAESTPEAAFRVNAEAPQI--IARFARDRGATLVHYSTDYVFDGRKEAPYVESDDTN 119
Query: 147 PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
P+NVYG+SK A E+ I F ILR+S ++
Sbjct: 120 PLNVYGQSKRAGEQAIEASGCRFVILRTSWVF 151
>gi|320104167|ref|YP_004179758.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319751449|gb|ADV63209.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 300
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G+ G L+ L E + ++V A T + D S V +DL
Sbjct: 2 RILLTGAAGWFGAFALESLIE---RGHEVVAWSGRTQGERRFQD---RSIVLEPIDLGHP 55
Query: 65 SGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + Q P+ +++ AA++ DPD A +NV ++ L + +
Sbjct: 56 DQ-ERLVRRLDQVDPEAILHAAAIASADAAFRDPDQAQRVNVQAT--ETLGLWCALRRRR 112
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
LI STD V+ G +E D P YG++K+ AE+ + + +R S++YG
Sbjct: 113 LIFTSTDLVFGGSGPPRRETDPAQPSLTYGRTKLEAERRLAQVNPEALSVRLSLMYG--- 169
Query: 183 ISPVPKSLPIQWIDSV---LSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ +S + + D V L++G F DE R P + V ++++ WL
Sbjct: 170 ---LTRSDRLSFFDQVLADLAQGRPRALFIDEYRTPAHAPTVARLLVE----WLESPTFP 222
Query: 240 QLLLNVGGPDRVSRV--------------QMAEVDRGVQS------PADISMDITKL 276
L++VGGPDR+SR Q+ + R + + PAD+++D T+L
Sbjct: 223 SGLVHVGGPDRLSRFDLVRQAAACLGLDPQLVQPSRMIDTRFNEPRPADVALDTTRL 279
>gi|295100776|emb|CBK98321.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
L2-6]
Length = 281
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 4 KRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
KRVLV G G++G +L +G + P D T + + + +L
Sbjct: 2 KRVLVTGAGGFVGARILDMWRGQFALCAFPSDTLRTADESAVLRFILKE----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
PDV+V+ AALS + C+ +P+ + NV L W++ E
Sbjct: 51 ---------------HPDVIVHTAALSNTQYCQQEPEDSFRANV--LLPEWVAKGAEEVG 93
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+ S+DQVY GV + E ++P NVYG+ K+ AE + +C + LR +Y
Sbjct: 94 AKLLSCSSDQVYAGVTQRGALAETLPLSPSNVYGQHKLEAEARVLARCPDAVALRLPWMY 153
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
P P+ +LP+ + + GE + F ++ R YVR+V++
Sbjct: 154 DLPGYHLPIRGNLPLNILRAA-KTGEVLRFSRNDYRGVGYVREVIE 198
>gi|402873332|ref|XP_003900533.1| PREDICTED: methionine adenosyltransferase 2 subunit beta [Papio
anubis]
Length = 278
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ +RVLV G TG LG+ + + E + + P+ F V+
Sbjct: 15 IPNRRVLVTGATGLLGRAVHK---EFQQNNWHAVGCGFRRARPK-----------FEQVN 60
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + F QP V+V+CAA P V EN PD+A +NV +S L+
Sbjct: 61 LLDSNAVHHIIHDF-QPHVIVHCAAERRPDVVENQPDAASQLNVDAS--GNLAKEAAAVG 117
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL 172
LI++S+D V++G Y+EED AP+N+YGK+K+ EK + E A+L
Sbjct: 118 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLEIALL 169
>gi|388254825|gb|AFK24940.1| dTDP-4-dehydrorhamnose reductase [uncultured archaeon]
Length = 315
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 53/276 (19%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-----------LDA 49
M KK++LV+G +G G ++Q + +DV T+++ L L+
Sbjct: 1 MEKKKMLVLGASGLTGYKVMQ----LAKSRFDVQGTYNARSTSYDLLLKLDLSKPDELNK 56
Query: 50 LPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLV 109
L H +PDVVVN AL CE+ P+ A IN +++V
Sbjct: 57 LMHEV---------------------KPDVVVNTTALHNVDYCESHPEEAYHIN--AAMV 93
Query: 110 NWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSN 168
++ +N +H+STD V++G K Y E D P +VY KSK+ E F C +
Sbjct: 94 KEMAEHCDNIGARFVHISTDFVFDGRKGAPYTESDPPNPESVYAKSKLEGETFA-RTCQS 152
Query: 169 FAILRSSIIY--------GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD 220
+ ++R+S++Y G + S P + + W S L++ E+++ D+ P
Sbjct: 153 WCVIRTSVVYGWTPLETQGSTSSSGKPMNFAL-WALSKLARAEELKIVSDQFTSPTLADV 211
Query: 221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQM 256
+ +I+ + +++ L +V G SR +
Sbjct: 212 LAAVIVKVAGTAAGKNE----LYHVAGTSCTSRYEF 243
>gi|381400853|ref|ZP_09925772.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae PYKK081]
gi|380834137|gb|EIC13986.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae PYKK081]
Length = 308
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 32/234 (13%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K + L+ G G +G L+ ++++GK D+ A +T LD VF
Sbjct: 16 KMKYLITGANGQVGNQLV---AQLQGKA-DIFAADRAT------LDITNRETVF------ 59
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A + +PD+++N AA + E++PD A +IN + L+ + +
Sbjct: 60 -------QAARTFRPDIIINAAAHTAVDKAESEPDLAHAINCTGA--ENLALAAQEVGAI 110
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++H+STD V++G ++ Y+E D +AP + YGKSK+A E+ + C+ ILR++ ++G
Sbjct: 111 VLHISTDYVFDGKGETAYRETDPVAPQSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEH 170
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+ V L + + + + D+ P Y D+ ++A+ + +++
Sbjct: 171 GNNFVKTMLRLG------ASRDTLGVVADQFGSPTYAGDIAAALIAMAEQIVNQ 218
>gi|384161398|ref|YP_005543471.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208]
gi|384170498|ref|YP_005551876.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens XH7]
gi|328555486|gb|AEB25978.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208]
gi|341829777|gb|AEK91028.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens XH7]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRRLKR-EG--YEVIA------LTKAMMNISDQQSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYTSLEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GARFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGNNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|321479218|gb|EFX90174.1| hypothetical protein DAPPUDRAFT_299978 [Daphnia pulex]
Length = 269
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 24/260 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS KRV++ G +G LG+ +L + + + V T S L+ +D
Sbjct: 1 MSSKRVVITGASGLLGRAVL---AAFKNSQWTVLGTSFSRTGEDLV-----------SID 46
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + + + F P+ +V+CAA P + D D + +NV ++ L+
Sbjct: 47 ICNHAKTEELIRNF-MPNCIVHCAAQRFPDKVDKDLDGTIRLNVEAT--KNLAVLAAKLG 103
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+I++STD V++G K Y E D P+N YGK+K+ E+ E + +LR ++YGP
Sbjct: 104 ATMIYISTDYVFDGTKPPYSETDTPNPLNTYGKTKLQGEQVTLESSQDHIVLRVPVLYGP 163
Query: 181 -QTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQ 238
+ I ++ +Q +L E + D E R P +V D+ I + L +
Sbjct: 164 VEYIGESAVTVLLQ----LLFDSESNKLVSDSEIRYPSHVDDIAFICVKLL-ELKQTNAD 218
Query: 239 MQLLLNVGGPDRVSRVQMAE 258
++ + + GG + +++ M +
Sbjct: 219 VKGIFHWGGKESMTKYGMVQ 238
>gi|385266701|ref|ZP_10044788.1| SpsK [Bacillus sp. 5B6]
gi|385151197|gb|EIF15134.1| SpsK [Bacillus sp. 5B6]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKQ-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|170698254|ref|ZP_02889331.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10]
gi|170136835|gb|EDT05086.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10]
Length = 314
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPENVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV ++I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHL 229
Query: 234 S 234
+
Sbjct: 230 A 230
>gi|148658677|ref|YP_001278882.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1]
gi|148570787|gb|ABQ92932.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 31/254 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG+G+LG L++ L+ +G +DV AT HS PQ + +DL++
Sbjct: 7 RLLITGGSGFLGARLVE-LALAQG--WDVVATCHSR-RPQT------PGVRWETLDLRNA 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + + PDVV++ A + PD I S+ V + + + LI
Sbjct: 57 AATRRLVEQV-TPDVVIHTAYR------QEGPDMMAIIGEGSAAVAQGAFAVQAR---LI 106
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLS+D V++G + Y E DE PV YG +K +E+ + I+R+S+IYG
Sbjct: 107 HLSSDVVFDGERIGRYTETDEPQPVTTYGAAKALSERLVAAAHPGALIVRTSLIYG---- 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P +++ VL + FF DE RCP+ V D+ +L L + D+ ++
Sbjct: 163 GPDRPGRHERFVLDVLDGRAEAVFFTDELRCPIEVGDLAAALLELA----TIDRSG--IV 216
Query: 244 NVGGPDRVSRVQMA 257
+V G D VSR + A
Sbjct: 217 HVAGSDVVSRYEFA 230
>gi|456873229|gb|EMF88638.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira santarosai
str. ST188]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+ +++CA L+ CE + A I++ S V ++ + ++H+STD +++G
Sbjct: 52 RPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQINSKMVHISTDHLWDGT 109
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-----QTISPVPKSL 190
E+ + PVN+YGK+K +E+ + S ILR++ +GP Q++S
Sbjct: 110 MQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FFGPGLQWRQSLS------ 162
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
WI + L++ EK+ F+D P+ + + ++IL+L K+ + + + G +R
Sbjct: 163 --DWIINSLNRNEKINAFYDVFFTPISIYHLARVILSLIQ------KKTKGIYHTVGSER 214
Query: 251 VSR--------------------VQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 290
+S+ + + ++ P D+S+ K+V LN T + G
Sbjct: 215 ISKYDFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLSTDKVVGFLNTSMPTIQAG 274
Query: 291 V 291
+
Sbjct: 275 I 275
>gi|237711070|ref|ZP_04541551.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA]
gi|423239166|ref|ZP_17220282.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
gi|229454914|gb|EEO60635.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA]
gi|392646953|gb|EIY40659.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei CL03T12C01]
Length = 287
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 52/289 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
VLV G G LG + +L+ H ++F DV+
Sbjct: 2 NVLVTGANGQLGNEM------------------------RLMAQNSSHHYIFTDVEELDI 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F+A+ +K + ++VNCAA + END D A ++N + V L++ + +
Sbjct: 38 TDFNAILQTVKEKEIQIIVNCAAYTNVDKAENDFDIANALN--NIAVGRLANVAKAQNAT 95
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V+ G Y E+D P+ VYGK+K+A E+ I + N+ ILR++ +Y
Sbjct: 96 LIHISTDYVFNGNNHIPYTEDDITDPIGVYGKTKLAGEETIKKVGCNYIILRTAWLYSKW 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ V + +LS D+ P Y +D+ I + R
Sbjct: 156 GNNFVKTMQKLTLEKDILS------VIFDQIGSPTYAKDLAHAISLIIER---------N 200
Query: 242 LLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLV-QTLNIDPVTYKD 289
+LN G S + GV S D + +I +L NI P+ +D
Sbjct: 201 MLNQQGIYHYS-------NEGVCSWFDFAKEICELSGHNCNITPIHSQD 242
>gi|154687906|ref|YP_001423067.1| SpsK [Bacillus amyloliquefaciens FZB42]
gi|154353757|gb|ABS75836.1| SpsK [Bacillus amyloliquefaciens FZB42]
Length = 282
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKQ-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|295105609|emb|CBL03153.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
SL3/3]
Length = 278
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G++G ++Q A H+ L P F+ +
Sbjct: 2 KKILVTGAGGFVGSRVMQQW-----------AGHYE-------LCTFPKGFL-------A 36
Query: 64 GSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+G DAV A+ +PDV+++ AA+S C P+ A NV S+ WL+
Sbjct: 37 TAGEDAVRQAVLQQRPDVILHTAAISDTGYCAGHPEQAYRANVELSV--WLARAAAEIGA 94
Query: 122 LLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+ S+DQVY GV+ E + P NVYG+ K+ E+ + C +LR++ +Y
Sbjct: 95 KLVAFSSDQVYAGVEQSGPLPETIPLKPANVYGQGKLEMEQRVQALCPGAVLLRATWMYD 154
Query: 180 -PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
P P+ +LP+ + + +GE V F + R YVR V ++ A
Sbjct: 155 LPGYRLPIRGNLPLNLLRAA-QRGESVRFSVWDFRGITYVRQAVALLEA 202
>gi|284174227|ref|ZP_06388196.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
gi|384434882|ref|YP_005644240.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
gi|261603036|gb|ACX92639.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2]
Length = 272
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 58/302 (19%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDA--LPHSFVFFDVDLK 62
R+L++G +G LG L LS K ++V T++S+ + LD PH D +K
Sbjct: 2 RILLIGASGQLGVELSNVLS----KKHEVIKTYNSSEIQGYKLDITDFPH---LEDFIIK 54
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+PDV++N AA++ CE + D A IN S V + ++
Sbjct: 55 K------------RPDVIINTAAMTDVDKCEIEKDKAYKIN--SQAVKHIVRAGRVVDSY 100
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+IH+STD V++G K YKE++ P+N YG SK+ E F + I+R+S ++
Sbjct: 101 VIHISTDYVFDGNKGNYKEDNIPNPINYYGLSKLLGEIFASSYDESL-IIRTSGVFR--- 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
K PI ++ L +G+ V F P+ R K+ LA+ D + +
Sbjct: 157 ----NKGFPI-YVYKTLKEGKTVLAFKG-YYSPISAR---KLALAIDELL---DLRKTGI 204
Query: 243 LNVGGPDRVSRVQMA--------------EVDR----GVQSPADISMDITKLVQTLNIDP 284
++V G +R+SR ++A EVD + P D S+DI+K + L ID
Sbjct: 205 IHVAG-ERISRYELAIKIKEKFNLPGEVKEVDEIKSWIAKRPYDSSLDISKARKLLTIDF 263
Query: 285 VT 286
T
Sbjct: 264 YT 265
>gi|327404132|ref|YP_004344970.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823]
gi|327319640|gb|AEA44132.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 40/312 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ +++ ++ +A + P+ S + ++DL +
Sbjct: 2 KILITGSNGLLGQKIVKRC--LKHHISFIATSKGVNRNPEC------PSENYIELDLVNS 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A+ +K +P +++ AAL+ CE P+ +NV +S N L + +
Sbjct: 54 EEVEAL-IKAQKPTAIIHTAALTNVDYCELHPEECYFVNVRAS--NVLFEAAKKVKAHFQ 110
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
LSTD V++G YKE+D + P+++Y +SKV AE+ + +N++I R+ I+YG T
Sbjct: 111 LLSTDFVFDGENGPYKEDDTVNPLSIYAQSKVDAEELLLNDSDTNWSIARTIIVYG--TG 168
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S I W L KGE ++ D+ R P + D+ + + R + +
Sbjct: 169 FGLSRSNMILWALEALPKGEVMKLVDDQFRAPTWADDLAYGCVEIIKR------NERGIF 222
Query: 244 NVGGP-DRVSRVQMAEVDRGVQ-------------------SPADISMDITKLVQTLNID 283
++ GP R + + EV + ++ P D++K Q L+
Sbjct: 223 HLSGPVTRSVKAIVEEVGKALELENIAIETISSTTLNQAAKRPPRTGFDLSKAAQKLDYL 282
Query: 284 PVTYKDGVKLTL 295
P+ ++ + L L
Sbjct: 283 PLDIQESIPLLL 294
>gi|424894482|ref|ZP_18318056.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393178709|gb|EJC78748.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 295
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 39/255 (15%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + ++ +IH+ST
Sbjct: 44 AAAFSTLRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAVAEAAARIGVP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A E + N+ ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATAPISVYGRSKLAGETAVAAANPNYVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR------------- 231
++ ++L E + D+ CP D+ ILA+ R
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQRGCPTSALDIADAILAIATRLEADPAPSLRGTF 212
Query: 232 ---------W--LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
W +E+ +LL + G V R+ A+ + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAELLKSGGKKVGVERIPTADYPTPAKRPANSRLNGDKLAKTY 272
Query: 281 NIDPVTYKDGVKLTL 295
I +K + + +
Sbjct: 273 GIRLPEWKQSMMIVM 287
>gi|310829415|ref|YP_003961772.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
gi|308741149|gb|ADO38809.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612]
Length = 287
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 39/186 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSE--IEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++L+ G G LG+ L+ + IE YDV P+L D+
Sbjct: 2 KILITGSNGQLGRQLITECKKRSIEYVGYDV---------PEL--------------DIT 38
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ +V K PD+++NCAAL+ CE + A ++N P +L + ++NK+
Sbjct: 39 NIKLVQSVVEK-ESPDIIINCAALTDVDGCERNAKLAFAVNAYGPKNL----AEISKNKD 93
Query: 121 NLLIHLSTDQVYEGVKSF-------YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
LL+HLSTD V++G F Y E D P VYGKSK A E F+ + S + I+R
Sbjct: 94 ILLVHLSTDYVFDGQGVFENGHKRPYVESDCTNPKTVYGKSKKAGEDFVVDNTSKYFIIR 153
Query: 174 SSIIYG 179
S+ +YG
Sbjct: 154 SAWLYG 159
>gi|37678486|ref|NP_933095.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016]
gi|37197226|dbj|BAC93066.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016]
Length = 293
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 38/263 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+VG +G LG L++ L T H L LD +D+
Sbjct: 2 RVLIVGSSGQLGHCLVRSLQ-----------TEHDI----LALDRQ-------QLDICEE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V F QP V+N AA + E++P+ A +N + L+ + L+
Sbjct: 40 QAVEKVFATF-QPQFVINAAAYTAVDKAESEPEMAYRVNEEGPKL--LAQECHHHGCPLV 96
Query: 125 HLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K+ Y E+D AP N+YG SK+A E + CS + ILR+S ++
Sbjct: 97 HISTDYVFDGDKNGLYCEDDRPAPGNIYGMSKLAGEHAVQHACSQYYILRTSWVF----- 151
Query: 184 SPVPKSLPIQWIDSVLSKG-EKVEF--FHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ ++L +G E+ + D+ P Y D+ ++I L R+ +
Sbjct: 152 ----SEFGNNFVKTMLRQGAERTQLGIVSDQVGGPTYAGDIARVIGRLLERFQFGEPVEY 207
Query: 241 LLLNVGGPDRVSRVQMAEVDRGV 263
L + G VS + A+ G+
Sbjct: 208 GLYHFSGMPHVSWFEFAQAIFGL 230
>gi|110635097|ref|YP_675305.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1]
gi|110286081|gb|ABG64140.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1]
Length = 295
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 28/179 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDLK 62
++LV G G L + LL D AA H P L LD A P ++DL
Sbjct: 2 KILVTGKNGQLARSLL-----------DRAARH-----PHLALDFAARP------ELDLA 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A A+ PD+VVN AA + E++P+ A ++N + ++ T +
Sbjct: 40 DPRTI-APAIARHAPDLVVNAAAYTAVDQAEDEPELAHAVN--GAAAGLIARATAARGIP 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V++G + Y+EED + P++VYG SK+A E+ + E+ + ILR++ +Y P
Sbjct: 97 LIHISTDYVFDGALARPYREEDPVNPLSVYGASKLAGERAVREQNPDHLILRTAWVYSP 155
>gi|126654758|ref|ZP_01726292.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp.
CCY0110]
gi|126623493|gb|EAZ94197.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp.
CCY0110]
Length = 292
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +GQ L Q LS I +V AT+ +DL S
Sbjct: 3 KILLTGSDGQVGQDLQQTLSPIG----EVIATNRQ------------------QLDLTSP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V K QPD+++N AA + E++ D A ++N + + ++ + L+
Sbjct: 41 DNIRQVIQKI-QPDIIINSAAYTAVDKAESESDLAFAVNGVAPAI--IAEEAKKIGAFLL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K+ Y E D P+ VYGKSK+A E+ I + + ILR++ +YG +
Sbjct: 98 HISTDYVFDGKKNTPYLETDITHPLGVYGKSKLAGEQGIEKNGDRYVILRTAWVYGTEGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQMQLL 242
K++ + + E++ D+ P + D+ I LT L+E +++
Sbjct: 158 GNFVKTML-----RLGQQKEQLGIVSDQVGSPTWSYDIANTISQILTKLNLAETREIYHF 212
Query: 243 LNVG 246
N G
Sbjct: 213 TNSG 216
>gi|340379657|ref|XP_003388343.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
[Amphimedon queenslandica]
Length = 301
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+K +VL+ G +G LG+ + Q L + ++V +S +L+ DL
Sbjct: 3 TKGKVLLTGASGLLGRQIYQCLKK---SSWEVMGLAYSRGGEELV-----------KADL 48
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ F +P +V++ AA P + D D A +NV ++ L+ + +
Sbjct: 49 LDFEKMREIMTDF-KPAIVIHSAAERRPDKVQKDEDKARGLNVTAT--QELTRLCQELGS 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+++STD V++G Y+ +D P+N YG+ K+ EK + + AI+R I+YGP
Sbjct: 106 FLVYISTDYVFDGTSPPYRHDDAPNPLNTYGQLKLDGEKAVSSYIDS-AIVRVPILYGP- 163
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S ++LS + E R P + RD+ + A +++ L++ + +
Sbjct: 164 -VETLDESAVTILFKALLS-NDPAPMSDYEKRYPTHTRDIGVFLEAFSSKVLTDREICRG 221
Query: 242 LLNVGGPDRVSR----VQMAEVDR--------------GVQSPADISMDITKLVQTLNID 283
+ GG + +++ ++MA+V + G P + D ++ + +D
Sbjct: 222 SWHFGGSEVLTKYDMVLKMAKVFKLSSKHLIPVREPSGGAPRPFNNEFDYSQTKKHFTMD 281
Query: 284 PVTYKDGVKLTL 295
+++DG+K L
Sbjct: 282 ITSFEDGIKTVL 293
>gi|402697119|gb|AFQ90747.1| methionine adenosyltransferase II beta, partial [Chrysemys picta]
Length = 211
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP V+V+CAA P V E+ D+ +NV +S L+ LI++STD V++G
Sbjct: 37 QPHVIVHCAAERRPDVVESQADAVSQLNVTAS--GNLAKEAAGVGAFLIYISTDYVFDGT 94
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
YKE D P+N+YGK+K+ EK + E A+LR I+YG + + +S
Sbjct: 95 NPPYKESDAPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPILYG--EVENLEESAVTVMF 152
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
D V + H + R P ++DV + L+ +
Sbjct: 153 DKVQFSNKSANMDHWQQRFPTNIKDVACVCRQLSEK 188
>gi|336437119|ref|ZP_08616828.1| hypothetical protein HMPREF0988_02413 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006253|gb|EGN36289.1| hypothetical protein HMPREF0988_02413 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 312
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+D+ S L+ +P+ ++NCA L+ +CE + + A +N + LS+
Sbjct: 63 DLDITSAEEVTLFGLR-NRPNTIINCAGLTDTELCERNVEEAYKVNALGA--RNLSAVAR 119
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +I LSTD V+ + + E D PV VYGKSK+A E F+ E I+RSS
Sbjct: 120 KLDARIIQLSTDDVFSSSEDRKFHEFDTPKPVTVYGKSKLAGENFVKELAPKHLIIRSSW 179
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+YG + V I KGE+++ DE P ++ K+I+ L +
Sbjct: 180 VYGKGGANFV------NMIIEKAKKGEQIQVPDDEFALPTSAAELSKVIIRLIQK----- 228
Query: 237 KQMQLLLNVGGPDRVSRVQMAE 258
+Q + V G R SR ++A+
Sbjct: 229 EQEGIYHAVCGGVRCSRYELAK 250
>gi|33637051|gb|AAQ23688.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus]
Length = 286
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MSK ++LV G G LG +++ L ++E + Y Q + + H
Sbjct: 1 MSKHKILVTGAKGQLGAEMVKLLKDMEYEVYGYGRAELDITDFQQVKSVIDHI------- 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
P+VV++ AA + E++PD A +N + ++S E+
Sbjct: 54 ---------------HPNVVIHAAAYTNVDAAESEPDQAFFVNAYGTRNVVVAS--EHIG 96
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+++STD V++G + Y E +P++VYGKSK+A E+F+ + S F I+R+S +YG
Sbjct: 97 AKFVYISTDYVFDGTANAPYNEFAFTSPISVYGKSKLAGEQFVRDLHSKFFIIRTSWVYG 156
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFF--HDECRCPVYVRDVVKIILALTN 230
+ V L + E+ E F D+ CP Y D+ I L +
Sbjct: 157 KHGNNFVKTMLKLA--------QEQKELFVVDDQIGCPTYTVDLASCIFQLIH 201
>gi|358388586|gb|EHK26179.1| hypothetical protein TRIVIDRAFT_35388 [Trichoderma virens Gv29-8]
Length = 318
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 129/269 (47%), Gaps = 26/269 (9%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+++ VL+ G TG LG+ ++ G + V + +S +D
Sbjct: 1 MAQRTVLITGATGLLGRAVVAAFHTRSG--WTVKGSGYSRA----------DGVDILKLD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+S + A L +P VVV+CAA P + DP++A ++N+ +S L+S T ++
Sbjct: 49 LESEADI-AKTLDEIRPQVVVHCAAQRFPDKVDKDPEAARALNIAAS--KSLASATAARD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ G + Y+ + P N+YG++K+ EK + E+ + L
Sbjct: 106 IFMIYISTDYVFPGRPGDAPYEADATPGPTNLYGQTKLDGEKAVLEEYAAAGKEGLGVAL 165
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T S ++ + + ++G K++ H R P DV ++ + +
Sbjct: 166 RVPVLYGHAETPSESAVNVLMDSVWKAQTEGTKIKMDHWAIRYPTNTGDVGRVCHDVATK 225
Query: 232 WL--SEDKQMQLLLNVGGPDRVSRVQMAE 258
+L ++ K + L DR+++ ++ +
Sbjct: 226 YLDSADRKHLPRTLQFSSEDRMTKYEICQ 254
>gi|421729809|ref|ZP_16168938.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407075775|gb|EKE48759.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|206561476|ref|YP_002232241.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315]
gi|198037518|emb|CAR53455.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315]
Length = 307
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 40/240 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K +LV G G +G L++ L + GK VAAT DVD
Sbjct: 9 KPTILVTGANGQVGWELVRALQPL-GKV--VAATRS-------------------DVDFA 46
Query: 63 SGSGFDAVAL-KFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DA A+ +F + PD+V+N AA + EN+PD+A ++N + +
Sbjct: 47 -----DAAAVGRFVETVAPDIVINAAAYTAVDRAENEPDAAFAVNRDAVRAM--ARVAAA 99
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +LL+H STD V++G K Y E D+I P+NVYG SK+A E+ + + ++ + R+S +
Sbjct: 100 RGSLLVHFSTDYVFDGSKQAPYSESDDIGPLNVYGASKLAGEQAVADIGGDWLVFRTSWV 159
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y + + + L + + E + +D+ P R + + + + L+E +
Sbjct: 160 YASRGQNFLRTMLRLG------TSREALSVVNDQYGAPTSARTIADLTVHAIAKSLAERR 213
>gi|291540641|emb|CBL13752.1| RmlD substrate binding domain [Roseburia intestinalis XB6B4]
Length = 178
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 43/189 (22%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G G LG+ + Q E K DV+ F + D+
Sbjct: 3 KKILVTGCNGQLGRAIRQ-----EYKGEDVS---------------------FINTDVAE 36
Query: 64 GSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNW 111
G G A+ + + +PDV++NCAA + CE D+A IN P +L
Sbjct: 37 GEGIVALDITDVNAVLALVRAERPDVIINCAAHTNVDACEQQWDAAYRINAIGPRNL--- 93
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
S +IH+STD V+EG + Y E DEI PV+ YGK+K EKF+ E +
Sbjct: 94 -SIAAREVGAKMIHVSTDYVFEGNGTKPYTEFDEIHPVSAYGKTKAEGEKFVREFADRYF 152
Query: 171 ILRSSIIYG 179
I R++ +YG
Sbjct: 153 IFRTAWLYG 161
>gi|427722511|ref|YP_007069788.1| dTDP-4-dehydrorhamnose reductase [Leptolyngbya sp. PCC 7376]
gi|427354231|gb|AFY36954.1| dTDP-4-dehydrorhamnose reductase [Leptolyngbya sp. PCC 7376]
Length = 292
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 36/246 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G +G LGQ + Q L E +G+ Y ++ S L + +L S+++ +V
Sbjct: 3 KILLIGSSGQLGQEV-QKLLEFKGEDY-ISCDRGSLNLSNI---SLIESYIY-NV----- 51
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
QPD+V+NC+A + E + + A IN +V ++ T+ + LI
Sbjct: 52 -----------QPDIVINCSAYTAVDRAEEEVEQAFLIN--HLVVEAIAKATKQIGSYLI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G Y EED P + YGKSK+A E+ I ++ + I+R++ +YG
Sbjct: 99 HISTDYVFDGQNYLPYSEEDLTNPRSTYGKSKLAGEQAIIKQTDKYIIVRTAWVYGIYGK 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVE---FFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ ++L G+ E D+ P + +D+ +L + + E+ +
Sbjct: 159 G--------NFVKTMLKLGQARENLGIVSDQIGSPTWTKDLAMALLQICKQLSQENSGIY 210
Query: 241 LLLNVG 246
N G
Sbjct: 211 HFTNSG 216
>gi|186476724|ref|YP_001858194.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
gi|184193183|gb|ACC71148.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815]
Length = 306
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V V+G +G LG+ + L + + + + T S P+P+ ++P +D++
Sbjct: 3 KVAVIGASGLLGRTIAGEL--VRQQDWQIVQTTFSRPMPE----SVP-------LDIRDA 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D ++ +P+ +V AA P VCEN+P A ++NV + V ++S + ++
Sbjct: 50 SAVDQF-VERERPNAIVIAAAERRPDVCENNPALARALNVDA--VRAIASAARRHDAWVL 106
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+STD V++G Y+ + +P+N YG+SK+ E+ + + +LR +++GP
Sbjct: 107 SISTDYVFDGTAPPYRYDATPSPINAYGRSKLEGERALADAADLGCVLRLPLLFGP 162
>gi|317484421|ref|ZP_07943336.1| RmlD substrate binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316924340|gb|EFV45511.1| RmlD substrate binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 285
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++F PDV+ N + + E P A+S+N L +L + L+H S+DQV
Sbjct: 50 IEFINPDVIFNTVSWNTENPAEKQPQEALSVN--RGLPAFLGGLVKGTPRFLVHYSSDQV 107
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKS 189
+ G K S Y EED+ P++ GKS++A E+ + E N I+R+ ++GP S
Sbjct: 108 FNGRKDSPYTEEDKADPISPCGKSRLAGEQALLELNADNICIIRTGWLFGPDGDS----- 162
Query: 190 LPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILAL 228
++ +L + + VE HD+ P Y +D+ + L L
Sbjct: 163 ----FLKRLLGRAKTEGTVEVIHDQIGSPTYAKDLAQATLQL 200
>gi|218680959|ref|ZP_03528856.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 894]
Length = 295
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAKAAARIGVP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y E+D AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKTSAYSEKDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR------------- 231
++ ++L E + D+ CP D+ ILA+ R
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGIF 212
Query: 232 ---------W--LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
W +E+ LL + G R+ R+ A+ + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAALLKSGGRSVRIERIPTADYPTPAKRPANSRLNGEKLARTY 272
Query: 281 NIDPVTYKDGVKLTL 295
I +K + + +
Sbjct: 273 GIRLPEWKKSMTVVM 287
>gi|394991339|ref|ZP_10384145.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 916]
gi|393807870|gb|EJD69183.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 916]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|375364221|ref|YP_005132260.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371570215|emb|CCF07065.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|171320478|ref|ZP_02909509.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
gi|171094289|gb|EDT39365.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
Length = 314
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAAALSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHL 229
Query: 234 S 234
+
Sbjct: 230 A 230
>gi|157960380|ref|YP_001500414.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
gi|157845380|gb|ABV85879.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
Length = 307
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 26/255 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-DL-K 62
+++V G TG LG+ +++ L + Q++ + + +V DL +
Sbjct: 6 KIMVTGATGLLGRAVVKQLKQCSDF--------------QVIECGFSRASIGIEVLDLTQ 51
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S F+ VA +PD +V+CAA P V E P +A+++N +S + L+
Sbjct: 52 SEQVFEFVAKH--KPDAIVHCAAERRPDVSEQAPQAALALNAEAS--DSLAKAASQNGAW 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+++STD V++G Y+E + PVN YG+SK+ E + + +FAILR I+YG
Sbjct: 108 LLYISTDYVFDGTAPKYEESSQTNPVNFYGQSKLQGENLVADSEPSFAILRLPILYG--D 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ + +S + + +L+ VE+ D R P D+ I + L+ KQ+
Sbjct: 166 VESLNESAVMVLLKHLLAP--HVEYLDDWAVRSPTSTADIAVAIHEMLVLQLA-GKQLSG 222
Query: 242 LLNVGGPDRVSRVQM 256
+ + +S+ QM
Sbjct: 223 RYHFSAEETMSKYQM 237
>gi|157961263|ref|YP_001501297.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
gi|157846263|gb|ABV86762.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345]
Length = 363
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 5 RVLVVGGTGYLGQHLLQ--GLSEIEGKPYDVAATHHSTPLPQLL---------LDALPHS 53
R+L+ G G LGQ LL GL+++ VA LP+ L + +
Sbjct: 2 RILITGAAGQLGQALLSIAGLTQVNLAERTVAQQMLVALLPEALECIETTDEVIGVSHQA 61
Query: 54 FVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
D+D FD +A PDVV+NCAA + E D D AM IN + L+
Sbjct: 62 LDICDID-SIRKAFDTIA-----PDVVINCAAYNAVDKAEFDIDKAMLINAEGPKL--LA 113
Query: 114 SFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAI 171
+ L+H+STD V++G + Y E+D AP++VYGKSK+ E+++ + S I
Sbjct: 114 GECQRHNIRLVHISTDFVFDGELLRAYTEQDSPAPLSVYGKSKLEGERWVSDILGSKATI 173
Query: 172 LRSSIIY 178
+R+S +Y
Sbjct: 174 IRTSWLY 180
>gi|444359915|ref|ZP_21161188.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia BC7]
gi|444368980|ref|ZP_21168764.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|443599916|gb|ELT68157.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|443601235|gb|ELT69385.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia BC7]
Length = 302
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 40/240 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K +LV G G +G L++ L + GK VAAT DVD
Sbjct: 4 KPTILVTGANGQVGWELVRALQPL-GKV--VAATRS-------------------DVDFA 41
Query: 63 SGSGFDAVAL-KFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DA A+ +F + PD+V+N AA + EN+PD+A ++N + +
Sbjct: 42 -----DAAAVGRFVETVAPDIVINAAAYTAVDRAENEPDAAFAVNRDAVRAM--ARVAAA 94
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +LL+H STD V++G K Y E D+I P+NVYG SK+A E+ + + ++ + R+S +
Sbjct: 95 RGSLLVHFSTDYVFDGSKQAPYSESDDIGPLNVYGASKLAGEQAVADIGGDWLVFRTSWV 154
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y + + + L + + E + +D+ P R + + + + L+E +
Sbjct: 155 YASRGQNFLRTMLRLG------TSREALSVVNDQYGAPTSARTIADLTVHAIAKSLAERR 208
>gi|269986680|gb|EEZ92960.1| dTDP-4-dehydrorhamnose reductase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 43/296 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ LV+GG+G++G +L + + A+ H +L D+
Sbjct: 2 KTLVLGGSGFIGYYLAKYFNATS------ASAHQKEGYIKL--------------DITDK 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V K +P++++N A++ +CE + ++AM +N V WLSS ++ +
Sbjct: 42 EEVSEVLNKI-KPELIINSTAIADVDLCEKEKETAMLVN--GYAVEWLSSLSKEIGAEFV 98
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAI-LRSSIIYGPQTI 183
+STD V++G YKEED P+N YGKSK+ E+ N AI LR + YG
Sbjct: 99 QISTDYVFDGFTGNYKEEDNPNPINEYGKSKLIGEE---NALKNDAIVLRIEMPYGINVA 155
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------------ 231
K++ + + + L +G+ V D+ P +V D+ K + L +
Sbjct: 156 K--NKNVFFESVINNLKEGKTVNAAVDQIISPTFVEDIPKAVEVLVKKGANGIFHLASKE 213
Query: 232 WLSEDKQMQLLLNVGGPDR--VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
S + + ++ +V D+ + V++A+ + P + ++I K+ + I P+
Sbjct: 214 HFSRFEFVNIIADVFNFDKTIIKPVKLADFKMLAKRPKNTFLNIDKISKFYEIKPL 269
>gi|452857407|ref|YP_007499090.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452081667|emb|CCP23438.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 282
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|392394625|ref|YP_006431227.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525703|gb|AFM01434.1| nucleoside-diphosphate-sugar epimerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 324
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 115/238 (48%), Gaps = 25/238 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGL--SEIEGKPYDVAATHHSTPLPQLLLDALPHSFV-FFDVDL 61
+VLV GG G++G HL++ L IE D + S + H V F +D+
Sbjct: 2 KVLVTGGAGFIGSHLVESLVCQGIEVSIIDNLVSGQS---------CMSHPLVAFHHMDI 52
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S AV ++ +PDVV + AA + R DP +N+ + +N L + E K
Sbjct: 53 CSRDA-KAVIIR-EKPDVVFHLAAQTDVRKSLQDPQYDAKVNICGT-INLLEACREAKVR 109
Query: 122 LLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFI--YEKCS--NFAILRSSI 176
LI ST VY + K EED +AP++ YG SK AAE +I + + ++ ILR S
Sbjct: 110 KLIFTSTSAVYGDLHKEPISEEDPVAPISYYGLSKWAAESYILLFHQLYGISYTILRFSN 169
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD---ECRCPVYVRDVVKIILALTNR 231
+YGP I+ + ++D + +K K H + R VYV+DVV+ I A R
Sbjct: 170 VYGPGQIAKGEGGVVAVFLDHIHAK--KTLNIHGDGAQTRDFVYVKDVVRAIQAAVER 225
>gi|411116892|ref|ZP_11389379.1| dTDP-4-dehydrorhamnose reductase [Oscillatoriales cyanobacterium
JSC-12]
gi|410712995|gb|EKQ70496.1| dTDP-4-dehydrorhamnose reductase [Oscillatoriales cyanobacterium
JSC-12]
Length = 295
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G+ L Q L TPL ++ + D L
Sbjct: 3 RILLTGANGQVGEELRQTL----------------TPLGEV---------ISVDRTLWDM 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S DA+ ++ QP+++VN AA + E++P+ A ++N ++ V E E L
Sbjct: 38 SEPDAIRPVVQTVQPNLIVNAAAYTAVDKAESEPELAHAVNGKAAQV-----IAEEAEKL 92
Query: 123 ---LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIH+STD V++G S Y E D P+ VYGKSK+ E+ + + C I+R++ +Y
Sbjct: 93 GAGLIHISTDYVFDGKHSSPYLETDSTNPLGVYGKSKLLGEEVVRQHCQKHMIIRTAWVY 152
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G Q K++ V ++ +++ D+ P + +D+ I L
Sbjct: 153 GIQGKGNFVKTML-----RVGAQRDELRVVTDQIGAPTWAKDLASAIAHL 197
>gi|223937614|ref|ZP_03629517.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
gi|223893777|gb|EEF60235.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
Length = 282
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 67 FDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F+AV F + P +V++CAALS C+ +P A +N+ + L+ EN L
Sbjct: 43 FEAVKRAFTEQKPQLVIHCAALSKSPACQANPLLARKVNI--EVTKHLAGLAENIPFLF- 99
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G Y E + P++VY ++KVAAE+F+ N ++R+S+ G S
Sbjct: 100 -FSTDLVFDGRAGNYDEAAAVNPLSVYAETKVAAEEFVLGN-PNHTVIRTSLNGG---TS 154
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
P + + G+ + F DE R P + I+ W Q L +
Sbjct: 155 PTGDRGFNEEMRRAWQAGKTLNLFTDELRSP------IPAIITARAVWELVSAQKPGLYH 208
Query: 245 VGGPDRVSRVQMAEV 259
+ G +R+SR Q+ EV
Sbjct: 209 IAGSERMSRWQIGEV 223
>gi|256376132|ref|YP_003099792.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
gi|255920435|gb|ACU35946.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV+G +GYLG + + D P A + ++D++ G
Sbjct: 10 RVLVIG-SGYLGGAVA---GRLRAGGVDAVVCSRRRPGA-----ASAGGAPWRELDVRDG 60
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + P+ VV S CE +P+ A + + ++ E + +LI
Sbjct: 61 RACRELVAEL-APEGVVVVHGPSDITWCEANPELAREAHAGGARN--IADAVEGRHVVLI 117
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--PQT 182
STD V++G ++ E D ++P N YG +K+AAE+ E+ S A LR S+++G P
Sbjct: 118 --STDNVFDGTRASSGESDPVSPANAYGAAKLAAERTFLERGSALA-LRVSLVHGWDPDG 174
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ P + ++ L G +++ D PV+V DV ++AL + +
Sbjct: 175 LRPNFATTCVR----ALRDGRELDVPEDHWNTPVHVDDVSAWVVALMG------ARRTGV 224
Query: 243 LNVGGPDRVSRVQMAE 258
L++GGPDR+SR++ A
Sbjct: 225 LHLGGPDRLSRLEWAR 240
>gi|172037461|ref|YP_001803962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142]
gi|354553657|ref|ZP_08972963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
gi|171698915|gb|ACB51896.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142]
gi|353554374|gb|EHC23764.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51472]
Length = 293
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +GQ L Q L I +V AT+ +DL S
Sbjct: 3 KILLTGSDGQVGQDLQQTLVPIG----EVVATNRQ------------------QLDLTSP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V + QPD++VN AA + E++ D A +IN + + ++ + L+
Sbjct: 41 NNIRQVIQEI-QPDIIVNSAAYTAVDKAESESDLAFAINAIAPAI--MAEEAKKIGAFLL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ Y E D+ P+ VYG+SK+A E+ I + + ILR++ +YG +
Sbjct: 98 HISTDYVFDGTQNTPYLETDKTHPLGVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTEGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII-LALTNRWLSEDKQMQLL 242
K++ + + E++ D+ P + D+ I LT L+E +++
Sbjct: 158 GNFVKTML-----RLGQEKEQLGIVSDQVGTPTWSYDIANTISQMLTQLNLAETREIYHF 212
Query: 243 LNVG 246
N G
Sbjct: 213 TNSG 216
>gi|311278964|ref|YP_003941195.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1]
gi|308748159|gb|ADO47911.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1]
Length = 293
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E + A SIN + L+ LLIH+STD V+ G
Sbjct: 52 KPDIIINAAAYTAVDKAEAESQLAYSINHIGA--KNLAEAATKVGALLIHISTDYVFPGT 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D+ PV+VYG+SK+ E I C+ + I+R++ ++G + V L +
Sbjct: 110 KEGLYTESDQTGPVSVYGRSKLDGENAIIASCAKYIIIRTAWVFGEHGHNFVKTMLRLA- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
++++ D+ P Y D+ K I+A+ +++ E+
Sbjct: 169 -----KTNKQLKVVSDQQGGPTYAGDIAKAIVAIAVKFMKEE 205
>gi|451345063|ref|YP_007443694.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens IT-45]
gi|449848821|gb|AGF25813.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens IT-45]
Length = 282
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYETDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|307153969|ref|YP_003889353.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
gi|306984197|gb|ADN16078.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822]
Length = 294
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 31/226 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR+L++G G LGQ L L+ PL +++ S +DL
Sbjct: 2 KRILLLGSNGQLGQELQTTLA----------------PLGEII------SVARDQLDLTQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + P+++VN AA + E++ + A ++N + + L+ ++
Sbjct: 40 TESIRQLIAQV-HPEMIVNAAAYTAVDKAESETELAYAVNEIAPKI--LARESQKLAATF 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G + E DE P+ VY KSK+A EK I E C + ILR++ +YG
Sbjct: 97 LHVSTDYVFDGTRGIPLTETDETNPIGVYAKSKLAGEKAIAENCERYIILRTAWVYGTYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+L + ++ E++ D+ P + +D+ I L
Sbjct: 157 KSNFVKTLL-----RLGAEREQLRVVADQVGTPTWAKDIADAIAKL 197
>gi|418678040|ref|ZP_13239314.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687551|ref|ZP_13248710.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742348|ref|ZP_13298721.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|400321230|gb|EJO69090.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410737875|gb|EKQ82614.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750706|gb|EKR07686.1| putative dTDP-4-dehydrorhamnose reductase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 282
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 42/241 (17%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+ +++CA L+ CE + A I++ S V ++ + ++H+STD +++G
Sbjct: 52 RPNYIIHCAGLTNVDDCEKNESLAKKIHIDVSHV--IAQTASQINSKMVHISTDHLWDGT 109
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-----QTISPVPKSL 190
E+ + PVN+YGK+K +E+ + S ILR++ +GP Q++S
Sbjct: 110 MQMVTEDVPVCPVNIYGKTKAESERAVLAVNSEALILRTN-FFGPGLQWRQSLS------ 162
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
WI + L++ EK+ F+D P+ + + ++IL L K+ + + + G +R
Sbjct: 163 --DWIINSLNRNEKINAFYDVFFTPISIYHLARVIL------LFIQKKTKGIYHTVGSER 214
Query: 251 VSR--------------------VQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDG 290
+S+ + + ++ P D+S+ K+V LN+ T + G
Sbjct: 215 ISKYDFAISIAKSFNKSTELIRPISIQDIQLNALRPLDMSLSTDKVVGFLNVSMPTIQAG 274
Query: 291 V 291
+
Sbjct: 275 I 275
>gi|123410516|ref|XP_001303722.1| dTDP-4-dehydrorhamnose reductase [Trichomonas vaginalis G3]
gi|121885122|gb|EAX90792.1| dTDP-4-dehydrorhamnose reductase, putative [Trichomonas vaginalis
G3]
Length = 285
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV GG+G+LG+ L+ LS K Y V A H ++DL
Sbjct: 2 KTILVTGGSGFLGRRLVSHLS----KNYTVVAPTHG------------------ELDLTD 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ K P ++++ AA+S +CE +P+ + SIN+ + +L+ + L
Sbjct: 40 REKIISEVTKI-NPQIIIHTAAISNTGLCEQNPELSESINLNGT--KYLAEAASKINSKL 96
Query: 124 IHLSTDQVYEG--VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-P 180
I S+DQ+Y G K E+ ++ PVNVYGK K+ AE+ + E LR + +Y P
Sbjct: 97 IFCSSDQIYNGNAEKGPLSEDIDVHPVNVYGKHKLEAERKLQEILPTSVSLRLTWMYDHP 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFH--DECRCPVYVRDVVKII 225
+ P K+LPI ++ +K + V F +E R +V +VV+ I
Sbjct: 157 SSKIPQHKNLPIMLLE---AKEKNVPFVTTVNEYRAITFVGEVVENI 200
>gi|269102101|ref|ZP_06154798.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161999|gb|EEZ40495.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 296
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 9/167 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +++N AA + E + D + +IN L +L+ EN L+H+STD V+ G
Sbjct: 52 KPHIIINAAAHTAVDKAETEVDLSYAINRDGPL--YLAQAAENVGATLLHISTDYVFSGD 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P VYGKSK+A E + + CS ILR++ ++G + + V L +
Sbjct: 110 KDGMYIETDTVDPQGVYGKSKLAGENAVLDNCSRSIILRTAWVFGEEGNNFVKTMLRLA- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+ +++ D+ P Y RD+ ++++ ++E +L
Sbjct: 169 -----QQRDELGIVADQFGGPTYARDIATALISIARTIIAEGSNFEL 210
>gi|172065131|ref|YP_001815843.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6]
gi|171997373|gb|ACB68290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6]
Length = 314
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 1 MSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 59 ------LDQPALEHLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAP--ARIGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGTAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHL 229
Query: 234 S 234
+
Sbjct: 230 A 230
>gi|424880972|ref|ZP_18304604.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517335|gb|EIW42067.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 295
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A PDV+V+ AA + E++ + A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALHPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAEAAARIGAP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAASPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE 235
++ ++L E + D+ CP D+ ILA+ R +++
Sbjct: 155 --FGTNFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVAD 203
>gi|417110006|ref|ZP_11963497.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512]
gi|327188679|gb|EGE55882.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512]
Length = 295
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSALRPDVIVSAAAYTGVDKAESEAELAFSVNAAGAGAIAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED AP++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYSEEDATAPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE--------- 235
++ ++L E + D+ CP D+ ILA+ R +++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVADPAPSLRGTF 212
Query: 236 --------------DKQMQLLLNVGGPD-RVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
+ LL GG + V R+ A+ + PA+ ++ KL T
Sbjct: 213 HLTGSGEASWADFAEAIFAALLKSGGKNVGVERIPTADYPTPAKRPANSRLNGDKLATTY 272
Query: 281 NIDPVTYKDGVKLTL 295
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|257058395|ref|YP_003136283.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
gi|256588561|gb|ACU99447.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802]
Length = 296
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P++++N AA + E +P+ A+++N + + ++ L+H+STD V++G
Sbjct: 52 HPNIIINGAAYTAVDQAEKEPELALAVNGIAPTI--IAEEAHKLGAFLLHISTDYVFDGT 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y EED PV+VYG+SK+A E+ I + + ILR++ +YG S +
Sbjct: 110 KNIPYTEEDPTHPVSVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKS--------NF 161
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E++ D+ P + +D+ + I Q+ L L++ +
Sbjct: 162 VKTMLRLGQEREQIRVVSDQIGSPTWAQDIAQTI-----------NQLLLTLDLKNTAEI 210
Query: 252 SRVQMAEVDRGVQSPADISMDITKLVQTL-------NIDPVTYKD 289
+ GV S D ++ I + Q + +DP+T D
Sbjct: 211 YHF----TNSGVASWYDFAVTIFEEAQNIGFPLKVQQVDPITTAD 251
>gi|313117361|ref|YP_004044344.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|448287733|ref|ZP_21478938.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|312294252|gb|ADQ68683.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
gi|445570866|gb|ELY25424.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM
11551]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 16/225 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G LG +++ + + + + T+HS + D H +D+ +
Sbjct: 2 QLLILGANGLLGSNVV---TAAQDRGWRTTGTYHS---ERPTFDIPLHQ-----IDITNT 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PD VVNCAA++ CE + + A +N + ++S +
Sbjct: 51 DAVQRV-LSEVEPDWVVNCAAMTDVDGCEENTEHAHEVNARAP--GEIASQCVESSIRFL 107
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G V Y+E+D P+ YGKSK A E + E+ + I R S +YG
Sbjct: 108 HVSTDYVFDGTVNGVYEEDDAPQPIQEYGKSKFAGENEVVERDPDALITRLSFVYGMHRG 167
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S P W+ L GE+ F D+ P + I L
Sbjct: 168 SDQLTGFPA-WVRGRLLDGEQTPLFTDQHVTPTRAGQAAETICDL 211
>gi|443686642|gb|ELT89839.1| hypothetical protein CAPTEDRAFT_48086, partial [Capitella teleta]
Length = 211
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+VGGTG +GQ + Q L E K + A +++L+
Sbjct: 2 KILLVGGTGLIGQEVQQLLQE---KLINCIAPGRD------------------ELNLEHP 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
D+ +LK QPD+V+NCA + P EN+P IN + L+ + L+
Sbjct: 41 ESIDS-SLKNYQPDIVINCAGYNDPVKAENEPSKCFRINRDAMAT--LADCCNRQNTTLV 97
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++ST +V++G+ K Y E+D P V S+ AE+ I E+C ILR S + I
Sbjct: 98 YISTYRVFDGIKKEAYSEKDIPNPSGVLATSRWQAEQQISERCPRHIILRLSWV-----I 152
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S +L ++++ +S+ ++V D+ CP D ++I+A+
Sbjct: 153 SYKRTNL-LKYLLDQISREQEVAVVSDQQGCPTPSEDAARVIVAI 196
>gi|288801217|ref|ZP_06406672.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299
str. F0039]
gi|288331828|gb|EFC70311.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299
str. F0039]
Length = 284
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G LG ++ +HH +F++D+
Sbjct: 2 RILVTGSNGQLGSEIV---------ALQAQESHHQ----------------WFNLDINEL 36
Query: 65 SGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
D A++ D ++NCAA + E D + +N + +L+ E
Sbjct: 37 DITDKKAIEQFVMSNSIDGIINCAAYTNVDKAEEDIEVCYKVNRDAP--QYLAQAIEKVG 94
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G+ + Y E+D PV +YGKSK+A E+ + C I+R++ +Y
Sbjct: 95 GFIIHISTDYVFDGISNIPYTEQDNPNPVTIYGKSKIAGEQNVCNSCKRHVIIRTAWVYS 154
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNR----- 231
S ++ +++ G++ + D+ P Y RD+ K I + N+
Sbjct: 155 ---------SFGKNFVKTMIKLGKEKANLGVIFDQIGSPTYARDLAKTITTIINQGIIPG 205
Query: 232 -----------WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
W K + L + +V + A+ + P +D TK+ +T
Sbjct: 206 TYNFSNEGVISWFDFTKHIHQLAKITSC-KVIPIHTADYPTLAKRPHFSVLDKTKIKKTY 264
Query: 281 NIDPVTYKDGVK 292
NI+ ++D ++
Sbjct: 265 NIEIPYWRDSLE 276
>gi|161523066|ref|YP_001585995.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|189348108|ref|YP_001941304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|160346619|gb|ABX19703.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
gi|189338246|dbj|BAG47314.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC
17616]
Length = 333
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV+G +G LG+ ++ L+ + +A + LL P DV
Sbjct: 13 VLVIGASGLLGRAVVASLAR-DPAFATIATIRNRDTRGARLLALPPDKIAILDV------ 65
Query: 66 GFDAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 66 -LDRPALERAFDLYRPAAVVVCAAERRPNVCERDPAGARAINVDAP--ARIGALAARYGA 122
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 123 WTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPI 182
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ S V +P + S + + V R P Y DV +I L +R L+
Sbjct: 183 ADWSESAVTSLVP-AIVASARAGADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA 237
>gi|428211038|ref|YP_007084182.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
gi|427999419|gb|AFY80262.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria acuminata PCC 6304]
Length = 289
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 34/244 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P VVVNCAA + E +P+ AM+IN + V L++ LIH+STD V++G
Sbjct: 51 KPQVVVNCAAYTAVDKAETEPELAMAIN--GTGVGILAAECHQLGARLIHVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I + + ILR++ +YG K++
Sbjct: 109 QSHPYGETDTTHPLGQYGASKLAGEEAIRQVGGDAIILRTAWVYGTGGSGNFVKTML--- 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------------TN----RW------ 232
+ S+ E++ D+ P + D+ I ++ TN W
Sbjct: 166 --RLGSQREELGVVTDQVGSPTWTGDLAAAIASMIQLAIPSGTYHYTNSGVASWYDFAIA 223
Query: 233 -LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDGV 291
E + + L + RV + E + PA + + K+ TL P ++ G+
Sbjct: 224 IFEEAQALNFPLQI---QRVKPISTEEYPTPARRPAYSVLSLAKIAATLGTYPPHWRQGL 280
Query: 292 KLTL 295
+ L
Sbjct: 281 RQML 284
>gi|221213793|ref|ZP_03586767.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
gi|221166582|gb|EED99054.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
Length = 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 32/240 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V+GGTG +G L++ ++G VA P Q+L DL
Sbjct: 9 IIVLGGTGQVGFELVRA---VQGIGPIVA------PARQVL-------------DLSDLC 46
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ L+ P VV+N AA + E+D D+AM IN ++L + L+ LLIH
Sbjct: 47 AVESWILR-QNPLVVLNAAAYTAVDRAESDRDAAMRIN--AALPDTLARTCARIGALLIH 103
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V++G K Y E D+ AP+NVYG+SK+A E+ I E + AI R+S +YG + +
Sbjct: 104 YSTDYVFDGSKPDLYTESDDPAPLNVYGESKLAGERAIAEAAAPHAIFRTSWVYGNRGSN 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ L + ++ ++ D+ P + R + ++ + L +R +S Q N
Sbjct: 164 FMNTML------RLANERDRFRIVGDQIGAPTWSRTIAELTVHLLSRTVSNGAIDQEFWN 217
>gi|217966753|ref|YP_002352259.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724]
gi|217335852|gb|ACK41645.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724]
Length = 278
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 30/177 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G+LGQ+ ++ E + +DV H D++++
Sbjct: 2 KVLITGAGGFLGQYFVK-----EFQDHDVIPLTHK------------------DINIEDK 38
Query: 65 SGFDAV-ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + + LK PD+V++ AA+ P +CE DPD A +N + ++ + L
Sbjct: 39 NTIEKIIELK---PDLVIHPAAIRSPDICERDPDLAWKVNALGT--KHIAIACSILDIPL 93
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
I++STD V+ G K S Y E D P+NVYG++K+ E F+ E C + I+R+S ++G
Sbjct: 94 IYISTDYVFSGDKNSPYTEFDTPNPINVYGRTKLQGELFVKEFCEKYFIIRTSYVFG 150
>gi|300853734|ref|YP_003778718.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
gi|300433849|gb|ADK13616.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P +++NCAA + CE D +SA+ +N + L+S +N + LIH+STD V+ G
Sbjct: 64 PSIIINCAAYTNVDKCETDFESALKVNSLGARNLALAS--QNTKIRLIHISTDYVFNGRG 121
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ ++E D PV+VYGK+K+ E++I E CS + I+R+S +YG
Sbjct: 122 TVPFREYDLPDPVSVYGKTKLLGEQYIKENCSRYFIVRTSWLYG 165
>gi|310792470|gb|EFQ27997.1| RmlD substrate binding domain-containing protein [Glomerella
graminicola M1.001]
Length = 317
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 33/272 (12%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS K V+V G TG LG+ + + +++G + V T +S F VD
Sbjct: 1 MSGKDVVVTGATGLLGRQVARAF-DLQG--WSVKGTGYSRA----------DGVSVFKVD 47
Query: 61 LKSGSGFDAVALKF---GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
L G A KF +P VVV+CAA P ++DPD+A ++NV ++ L+
Sbjct: 48 L----GDTAEVEKFLDESKPQVVVHCAAQRFPDKVDSDPDAARALNVAAT--KSLAKLCA 101
Query: 118 NKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-----CSNFA 170
+ LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E+ C
Sbjct: 102 ARSTLLIYISTDYVFSGKPGEAPYEADAPTGPTNLYGQTKLDGELAVLEEYKAAGCEGLG 161
Query: 171 -ILRSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+LR ++YG T + ++ ++ + KV+ H R P DV ++ +
Sbjct: 162 LVLRVPVLYGKADTPAESATNILMETLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDI 221
Query: 229 TNRWL--SEDKQMQLLLNVGGPDRVSRVQMAE 258
++L + M +L D++++ ++ +
Sbjct: 222 AVKYLEAGDRSSMPKVLQFSSEDKMTKYEICQ 253
>gi|406915076|gb|EKD54200.1| DTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A+ PD+++N AA + E + D+AM +N V L+ LL+H+STD
Sbjct: 51 AIDNTAPDIIINTAAYTAVDDAEKNSDAAMRVNYLG--VKNLAELCRRYNILLLHISTDY 108
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G + + Y+EED P+NVYG SK EK I + + ILR S I+ + +
Sbjct: 109 VFDGKQYTLYQEEDFPNPINVYGLSKWLGEKAITDHHDRYIILRVSGIFSEYNHNFLKTI 168
Query: 190 LPIQWIDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILALTNR 231
L + EK+EF D+ CP Y D+ I+ +L +
Sbjct: 169 LRLS--------REKIEFNVVADQITCPTYAEDIADILFSLIKK 204
>gi|421480255|ref|ZP_15927893.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
CF2]
gi|400221449|gb|EJO51905.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
CF2]
Length = 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV+G +G LG+ ++ L+ + +A + LL P DV
Sbjct: 13 VLVIGASGLLGRAVVASLAR-DPAFAAIATIRNRDTRGARLLALPPDKIAILDV------ 65
Query: 66 GFDAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
D AL+ +P VV CAA P VCE DP A +INV + + + +
Sbjct: 66 -LDRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAP--ARIGALAAHYGA 122
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 123 WTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPI 182
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ S V +P + S + + V R P Y DV +I L +R L+
Sbjct: 183 ADWSESAVTSLVP-AIVASARAGADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA 237
>gi|167758135|ref|ZP_02430262.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704]
gi|167664032|gb|EDS08162.1| dTDP-4-dehydrorhamnose reductase [Clostridium scindens ATCC 35704]
Length = 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG+ PDV++NCAA++ VCE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGEINRPDVIINCAAVTDTDVCEREPELAFRVNALGA--RNLSIVARKVGAKMVQLST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ K+ Y E D+ P VYG+SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGLSKTPYSEFDDTNPKTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGRGN-NFVT 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRW 232
K L +G + D+ P +D+ +IIL L TN +
Sbjct: 162 KVL------DAADEGRTLAVASDQFGSPTSAKDLARIILYLIPTNEY 202
>gi|406885325|gb|EKD32554.1| hypothetical protein ACD_77C00058G0008 [uncultured bacterium]
Length = 312
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 16/165 (9%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKEN-----LLIHLSTDQV 131
++VNCAA + E+D +SA ++NV ++ L L+ N + LLIH+STD V
Sbjct: 64 IIVNCAAYTAVDKAEDDINSATAVNVDAAKNLAEALAKLNNNSDAGRTSPLLIHISTDYV 123
Query: 132 YEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
++G K + Y+E+D P VYG++K+ EK + + N+ I+R+S +Y + V
Sbjct: 124 FDG-KGYKPYREDDACNPAGVYGRTKLEGEKAVEKSGCNYLIIRTSWLYSSYGANFVKT- 181
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
I + + E + D+ P Y D+ K I A+ ++L+
Sbjct: 182 -----IARLAGEKESLNVVFDQVGTPTYAGDLAKAIDAVVKKYLT 221
>gi|308175508|ref|YP_003922213.1| spore coat polysaccharide synthesis protei SpsK [Bacillus
amyloliquefaciens DSM 7]
gi|384166302|ref|YP_005547681.1| spore coat polysaccharide synthesis protein SpsK [Bacillus
amyloliquefaciens LL3]
gi|307608372|emb|CBI44743.1| spore coat polysaccharide synthesis protei SpsK [Bacillus
amyloliquefaciens DSM 7]
gi|328913857|gb|AEB65453.1| spore coat polysaccharide synthesis protein SpsK [Bacillus
amyloliquefaciens LL3]
Length = 282
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRRLKQ-EG--YEVIA------LTKAMMNISDQQSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + EN
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYTSLEA--ENT 93
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + D+ A P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GARFIHISTDYVFSGKGTRPSHTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + ++V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGNNFVNTMLKLA------DTHDQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|194334529|ref|YP_002016389.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM
271]
gi|194312347|gb|ACF46742.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM
271]
Length = 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
DV++NCAA + E+D D+AM +N V L+ + LL+ +STD V+ G S
Sbjct: 54 DVIINCAAYTAVDRAEDDADTAMRVNRDGPGV--LAECARERGALLLQVSTDYVFNGESS 111
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+E DE++P+ VYG+SK E+ + +++ I R+S +Y + V L +
Sbjct: 112 VPYRECDEVSPLGVYGQSKWEGEELVRRSGASYMIFRTSWLYSAHGNNFVKTMLRLG--- 168
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +++ D+ P Y D+ + ++ + R
Sbjct: 169 ---AERDELRVVFDQVGTPCYAADLARALMHVLER 200
>gi|110349046|gb|ABG73090.1| RfbD [Rhizobium leguminosarum bv. trifolii TA1]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++P+ A S+N + +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEPELAFSVNAAGAGAGCRGFCAIGAP--VIHIST 101
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
+ V+ G ++F Y EED AP++VYG+SK+A E+ + N ILR++ +Y P
Sbjct: 102 EYVFSGDRAFAYSEEDATAPISVYGRSKLAGEEAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLL 243
++ ++L E + D+ CP D+ ILA+ R +++ + ++
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRVVADPEPSLRGTF 212
Query: 244 NVGGPDRVSRVQMAE 258
++ G S AE
Sbjct: 213 HLTGSGEASWADFAE 227
>gi|423410996|ref|ZP_17388116.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3O-2]
gi|423433219|ref|ZP_17410223.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4O-1]
gi|401109171|gb|EJQ17098.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3O-2]
gi|401112701|gb|EJQ20577.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4O-1]
Length = 279
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD++++ AA + E+D +SA +N + +L+ E ++STD V++G
Sbjct: 51 QPDIIIHTAAYTQVDQAESDEESAFKVNAEGT--KYLAQAAEAVGAKFCYVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K YK +D+ P VYGKSK+ E++ E CS I+R+S ++G + V L +
Sbjct: 109 KDTPYKPDDQTNPQTVYGKSKLVGEQYTQEYCSKSYIVRTSWVFGLYGNNFVKTMLRL-- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ +++ HD+ P Y D+ + I++L
Sbjct: 167 ----AEENKELGIVHDQVGSPTYTTDLARFIISL 196
>gi|385775563|ref|YP_005648131.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A]
gi|323474311|gb|ADX84917.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A]
Length = 274
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 55/297 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G +G LG L + L K Y+ + +DL +
Sbjct: 2 RILITGASGQLGIELSEVLKGDLIKVYNTKEVQGG-----------------YKLDLTNY 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +K +PDV++N A+L+ C + A +N + V + + E LI
Sbjct: 45 SAVEDFIIK-KKPDVIINTASLTDVDKCGIERGLAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKE+D P+N YG SK+ E + + +LR+S ++
Sbjct: 102 HISTDYVFDGEKGLYKEDDLPNPINYYGLSKLLGETYALS-YDDTLVLRTSGVFR----- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L D + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------DYRKTGILN 205
Query: 245 VGGPDRVSRVQMA--------------EVD--RG--VQSPADISMDITKLVQTLNID 283
V G +R+SRV +A EVD +G + P D S+DI+K + L++D
Sbjct: 206 VAG-ERISRVDLAMKIKEKFNLGGSVKEVDDVKGWVAKRPFDSSLDISKAKKILSVD 261
>gi|150020962|ref|YP_001306316.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429]
gi|149793483|gb|ABR30931.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429]
Length = 285
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 27/220 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LGQ Q L + EG Y AT + +L + L F
Sbjct: 2 RILITGAYGQLGQDF-QKLFDKEGIEY--IATDNKEGYKKLDITNLDKVIEF-------- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A +K PDV++NCAA + E + A +IN S V L+ + L+
Sbjct: 51 ----AKKIK---PDVIINCAAYNAVDKAEEEWKVAYNINGLS--VRNLAIAASLNNSFLV 101
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G K Y D P++ YG+SK EK + + N+A++R+S ++G I
Sbjct: 102 HYSTDYVFDGRKGMPYTIYDTPNPLSKYGESKYLGEKLLSQFYDNYALIRTSWVFGKGNI 161
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ K I+W K EK+ DE P Y D+ K
Sbjct: 162 NFAKKV--IEW----SKKYEKISLVIDEISAPTYTVDLAK 195
>gi|402082163|gb|EJT77308.1| methionine adenosyltransferase 2 subunit beta [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 320
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 30/273 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS KRVL+ G TG LG+ +++ + +G AA + VD
Sbjct: 1 MSDKRVLITGATGLLGREVVRAFQDKKGWAVTGAAFSRA------------DGVSILKVD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + AL +P VVV+CAA P + DP+ +NV ++ L+
Sbjct: 49 LGNVVEIEK-ALDKIRPQVVVHCAANRFPDKVDKDPEGTRRLNVAAT--GTLARLCAATG 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK-------CSNFAI 171
+LI++STD V+ G ++ Y + E P N+YG++K+ E+ + E + +
Sbjct: 106 AVLIYISTDYVFSGRPGEAPYAADAETGPTNLYGQTKLDGERAVLEAYGGGGKGKARGVV 165
Query: 172 LRSSIIYGPQTI---SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
LR ++YG S V + + W + + + V+ H R P DV ++ +
Sbjct: 166 LRVPVLYGHAETPAESAVNVLMDVLW-QAQGDEAKAVKMDHWALRYPTNTEDVGRVCADV 224
Query: 229 TNRWLSEDKQMQL--LLNVGGPDRVSRVQMAEV 259
++L D L LL D++++ ++ ++
Sbjct: 225 AEKYLDTDDSATLPKLLQFSSEDKLTKYEICQL 257
>gi|15922287|ref|NP_377956.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7]
gi|145579383|pdb|2GGS|A Chain A, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose
Reductase From Sulfolobus Tokodaii
gi|145579384|pdb|2GGS|B Chain B, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose
Reductase From Sulfolobus Tokodaii
gi|15623076|dbj|BAB67065.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7]
Length = 273
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 54/300 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ G +G LG L + LSE ++V ++S+ + + +DL
Sbjct: 2 RTLITGASGQLGIELSRLLSE----RHEVIKVYNSSEIQG-----------GYKLDLTDF 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +K +PDV++N AA++ CE + + A IN + V + + ++ ++
Sbjct: 47 PRLEDFIIK-KRPDVIINAAAMTDVDKCEIEKEKAYKINAEA--VRHIVRAGKVIDSYIV 103
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG SK+ E F + S I+R+S I+
Sbjct: 104 HISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQDDS--LIIRTSGIFR----- 156
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G+ V F P+ R + IL L + + +++
Sbjct: 157 --NKGFPI-YVYKTLKEGKTV-FAFKGYYSPISARKLASAILELL------ELRKTGIIH 206
Query: 245 VGGPDRVSRVQMA--------------EVD--RG--VQSPADISMDITKLVQTLNIDPVT 286
V G +R+SR ++A EVD RG + P D S+D ++ + L+ D T
Sbjct: 207 VAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYT 265
>gi|257077379|ref|ZP_05571740.1| dTDP-4-dehydrorhamnose reductase [Ferroplasma acidarmanus fer1]
Length = 275
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 41 PLPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM 100
L +L +++P S +DL++ + + K+ D V+NCAA++ CE + DSA
Sbjct: 15 ALSSILENSIPLSHDV--IDLRNVNNIENTLDKY-SFDTVINCAAMTSVDKCEIEIDSAY 71
Query: 101 SINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK 160
IN S + ++ + LIH+STD V+ G K Y E+D P+N YG SK+ +
Sbjct: 72 YINGLS--MKYIGDYCRENNKYLIHVSTDYVFNGNKGNYTEDDISYPINYYGLSKLIGDT 129
Query: 161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRD 220
+ N I+R+S +YG + + P+ ID L + F D PV
Sbjct: 130 YA-NSYQNSLIIRTSGVYGAKN------NFPLYVIDR-LRNNSGINAF-DNYYSPVNANV 180
Query: 221 VVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA 257
+ I L D ++ +LNV GP R+SR + A
Sbjct: 181 LAHSISKLL------DLKLTGILNVSGP-RLSRYEFA 210
>gi|300853757|ref|YP_003778741.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
gi|300433872|gb|ADK13639.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM
13528]
Length = 294
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VNCAA + CE D ++A +N + L+S +N + L+H+STD V+ G
Sbjct: 64 PDIIVNCAAYTNVDKCEIDFENAFKVNSLGARNLALAS--QNTKTKLVHISTDYVFNGRG 121
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ ++E D P++VYGK+K+ E++I E CS + I+R+S +YG
Sbjct: 122 AIPFRECDLPDPISVYGKTKLLGEQYIRENCSRYFIVRTSWLYG 165
>gi|386721118|ref|YP_006187443.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus K02]
gi|384088242|gb|AFH59678.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus mucilaginosus K02]
Length = 283
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+++CAA + E+D D A +N + +++ E + L ++STD V++G
Sbjct: 50 RPDVIIHCAAYTAVDQAESDVDGAYLVNAVGT--RNMAAAAEKVGSKLCYISTDYVFDGK 107
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D+ P +YGKSK A E+ CS + I+R+S +YG + V L +
Sbjct: 108 GTSPYREYDKTNPSGIYGKSKEAGEQLAMSLCSRYFIVRTSWVYGLHGNNFVKTMLKLS- 166
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
++++ HD+ P + D+ +LAL
Sbjct: 167 -----EDRDRLKVVHDQIGSPTFTEDLAGFLLAL 195
>gi|430752003|ref|YP_007214911.1| dTDP-4-dehydrorhamnose reductase [Thermobacillus composti KWC4]
gi|430735968|gb|AGA59913.1| dTDP-4-dehydrorhamnose reductase [Thermobacillus composti KWC4]
Length = 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V++CAA + + E++PD+A +N + ++ E L+++STD V++G
Sbjct: 58 RPDAVIHCAAHTAVDLAESEPDAAYRVNAYGT--RNVAVAAEEIGAKLVYISTDYVFDGR 115
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D P +VYGKSK+A E C + I+R+S +YG + V L
Sbjct: 116 GSQPYREYDRTDPQSVYGKSKLAGELLAQTLCRRYFIVRTSWVYGKYGSNFVKTML---- 171
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + ++++ HD+ P Y D+ + +L L
Sbjct: 172 --RLAGERDRLKVVHDQVGSPTYTLDLAEFLLEL 203
>gi|361127549|gb|EHK99515.1| putative Methionine adenosyltransferase 2 subunit beta [Glarea
lozoyensis 74030]
Length = 314
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 31/268 (11%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +++ E +DV T L A P + + D+
Sbjct: 3 RTALITGATGLLGRQVVKAFERAE---WDVKGTG--------LTRAKPPTILKLDL---- 47
Query: 64 GSGFD-AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
GS D A ++ +P VVV+CAA P C+NDP+ ++NV +S L+
Sbjct: 48 GSEADVAKTIEDIKPSVVVHCAANRFPDKCDNDPEGTRALNVAASAS--LAKICAANSIF 105
Query: 123 LIHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------ILRS 174
LI++STD V+ G + + Y+ P N+YG++K EK + + +LR
Sbjct: 106 LIYISTDYVFPGTEGDAPYEVTSTPNPPNLYGETKHEGEKAVLAELEKAGKQGWAVVLRV 165
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWL 233
++YG + P ++ + +DS+ E V H R P DV ++ + ++L
Sbjct: 166 PVLYG-EAEKPAESAVNVL-MDSIWKAQEGSVNMDHWALRYPTNTEDVGRVCQDIAAKYL 223
Query: 234 SEDKQMQL--LLNVGGPDRVSRVQMAEV 259
S + + L +L D+ ++ ++ E+
Sbjct: 224 STEDKTSLPKILQFSSEDKFTKYEICEL 251
>gi|298290102|ref|YP_003692041.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506]
gi|296926613|gb|ADH87422.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 47 LDALPHSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV-- 104
L AL H+ +D+ S A AL+ +P VV+N AA + E++P+ A IN
Sbjct: 28 LTALDHA----GLDITDASALKA-ALEQYRPQVVINAAAYTAVDKAESEPEKANLINAVA 82
Query: 105 PSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIY 163
P + +S LIH+STD V++G K+ Y E D +AP+ VYG SK A E+ +
Sbjct: 83 PGLIAQACASHGAG----LIHISTDYVFDGTKAGAYVESDPVAPLGVYGASKEAGERAVR 138
Query: 164 EKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ I+R+S +YG + + L + +++ D+ CP RD+ +
Sbjct: 139 DSLDRHLIVRTSWVYGVHGANFLKTMLRLA------ETRDRLTVVADQTGCPTATRDIAE 192
Query: 224 IILALTNRWLSED 236
+L + + D
Sbjct: 193 GLLTAAMQLATAD 205
>gi|332715610|ref|YP_004443076.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3]
gi|325062295|gb|ADY65985.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 33/254 (12%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PDVVV+ AA + E +PD A ++N + ++ + +IH+STD
Sbjct: 45 ALRDAKPDVVVSAAAYTAVDKAETEPDIAFAVNRDGAKA--VARAANDIGVPVIHISTDY 102
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D P +VYG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKTTAYVENDPTGPASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------------------ 231
L + +++ D+ CP D+ I+++ R
Sbjct: 163 LRLS------ESRDEINVVADQFGCPTSANDIAIAIVSIAKRLATDPSAHLRGVFHMSGT 216
Query: 232 ----WLSEDKQMQLLL--NVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
W KQ+ N G V+ + A+ Q PA+ +D KL + I
Sbjct: 217 GETNWAGFAKQIFAFSAENGGKSIVVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIRLP 276
Query: 286 TYKDGVKLTLAAEA 299
++ + +AA A
Sbjct: 277 EWQTSTRAVMAALA 290
>gi|167945178|ref|ZP_02532252.1| putative dTDP-4-keto-L-rhamnose reductase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 239
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + V + + + A++ + + V L+ + L++H STD V++G
Sbjct: 25 KPDLIVNAAAYTA--VDKAEAEEALATTINGTAVGVLAEQARKRNALMVHYSTDYVFDGT 82
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K + Y EEDE P+N YG+SK+A E+ + E + I R++ +Y + + + L
Sbjct: 83 KPTPYTEEDEPNPINAYGRSKLAGEQAVAEVGGEYLIFRTTWVYAARGHNFIKTIL---- 138
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ + ++++ D+ P + R++ RW+ +Q + L
Sbjct: 139 --RLAGERDELKIIDDQHGAPTWARNIADATALALARWMLLKEQGREL 184
>gi|363889678|ref|ZP_09317035.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM5]
gi|363892910|ref|ZP_09320056.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM2]
gi|361962154|gb|EHL15302.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM2]
gi|361966435|gb|EHL19347.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium CM5]
Length = 286
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ G G LG+ L + +++ + + Y +DVD
Sbjct: 2 RYLITGANGQLGRVLQKEINKSDNEIY------------------------LYDVDTMDI 37
Query: 65 SGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ ++ V PDV+ NCAA + CE D D+A IN + L+ E+ ++
Sbjct: 38 TDYEQVKNIILDIIPDVIFNCAAHTNVDKCEEDIDNAYKINAIGAQN--LAMIAEHIDSK 95
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H STD V+ G + E + A P VYGKSK+ E+ + + CS + I+R++ +YG
Sbjct: 96 LVHFSTDYVFSGEDEIPRIESDFANPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDG 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+ V L + + +K+ D+ P Y +D+ K+ L L+
Sbjct: 156 N-NFVRTMLNLS------KQNDKLTVVGDQFGSPTYTKDLAKVALNLS 196
>gi|350545358|ref|ZP_08914847.1| dTDP-4-dehydrorhamnose reductase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526861|emb|CCD39394.1| dTDP-4-dehydrorhamnose reductase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 329
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL++GG G++GQ L E+ + VA + P L H + +D
Sbjct: 17 VLIIGG-GFVGQCLA---DELLSNGHRVAIACRNRP------QGLRHRDRWIQLDATDAV 66
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
F A+ + +P VVV S C DP A I+ S++ F LL+
Sbjct: 67 AFRK-AVGWLRPSVVVLVNGPSDISECAKDPVEAARIH--SAVARNACEFAPTAYKLLV- 122
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISP 185
STD V++G ++ E P+N YG++K+AAE+ ++ F I R+S+IYG +
Sbjct: 123 -STDNVFDGRRTTCTEAVTPEPLNAYGRAKLAAERILHAYGGQFLIARTSLIYGWEEDQR 181
Query: 186 VPK---SLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ +L IQ L+ E +E D P+ V D KI R L E+ + L
Sbjct: 182 GWQNFFALSIQ----RLAFAETLEVPADLWNTPIVVADAAKIY----RRCLEEN--VTGL 231
Query: 243 LNVGGPDRVSRVQMAEV 259
L+V GP R+SR+ A +
Sbjct: 232 LHVAGPQRISRLDWARL 248
>gi|417925576|ref|ZP_12568995.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
SY403409CC001050417]
gi|341591202|gb|EGS34410.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
SY403409CC001050417]
Length = 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ R+ + G G +G+ L + L E +V AT + ++D +
Sbjct: 1 MSRNRIWISGADGKIGKVLQKYLDPFED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P++++NC+AL+ P +C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNIIINCSALTDPVLCQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|126178138|ref|YP_001046103.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1]
gi|125860932|gb|ABN56121.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1]
Length = 270
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD+VVN AA + CE++ D A ++N + +++S + L+H STD V++G K
Sbjct: 52 PDLVVNAAAYTDVDGCEDNRDLAFAVN--GEALAYIASACSDAGATLVHYSTDYVFDGSK 109
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y E D AP+NVYG SK+ E+ I + ++ I+R+S ++G + V L +
Sbjct: 110 REYIESDTPAPINVYGASKLLGEQNIVKNTGDYRIIRTSWLFGRHGKNFVETMLHLS--- 166
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ ++V +D+ P Y D+ +
Sbjct: 167 ---KQMDQVRVVNDQVGKPTYTVDLAR 190
>gi|397690694|ref|YP_006527948.1| dTDP-4-dehydrorhamnose reductase [Melioribacter roseus P3M]
gi|395812186|gb|AFN74935.1| putative dTDP-4-dehydrorhamnose reductase [Melioribacter roseus
P3M]
Length = 293
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 41/263 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSE---IEGKPYDVAATHHSTPLPQLLL---DALPHSFVFFD 58
++ + GG+G +GQ+L ++E I + Y QL L D L F F
Sbjct: 2 KIFITGGSGLIGQYLNIYIAEKHDILTQYYRNKGNCKEYNSVQLQLNDYDKLKEIFENF- 60
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAM-SINVPSSLVNWLSSFTE 117
+PD VV+ AA+S ++ S + INV ++ L+ +E
Sbjct: 61 -----------------RPDAVVHAAAISNSAKADSLSRSYVYEINVNAT--KKLAELSE 101
Query: 118 NKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +I+LSTD VY G + S+ E ++ PV++Y ++K+ E+ I E N+ ILR ++
Sbjct: 102 RYNSKIIYLSTDLVYAGYRGSYLNENAKLIPVSLYAETKLMGEQKIKEATQNYIILREAL 161
Query: 177 IYG---PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
IYG T + ++L + E+V+ F D+ R P+ ++ ++I L
Sbjct: 162 IYGFGLNHTTNFFQETLK------KIKNNERVKLFTDQFRSPLSLKVAARMIARLIE--- 212
Query: 234 SEDKQMQLLLNVGGPDRVSRVQM 256
ED + + LN GG +R+SR +
Sbjct: 213 IEDLKSE-TLNFGGNERLSRYDL 234
>gi|83645210|ref|YP_433645.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396]
gi|83633253|gb|ABC29220.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396]
Length = 303
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
++V G TG LG L + LS + G+ + AL + DL
Sbjct: 3 IMVTGATGQLGWELARSLSML-GR-----------------VRALGRN----QCDLNDPG 40
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
AV +PDV+VN AA + E+D AM +N S V L+ +N L +H
Sbjct: 41 SLRAVVRDI-KPDVIVNAAAYTAVDKAESDRGGAMRVNSDSVAV--LAEEAKNCGALFVH 97
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G K Y E D + P+N YG SK++ E I + N+ I R+S +Y + +
Sbjct: 98 YSTDYVFNGEKGAPYVEVDPVCPINTYGYSKLSGENLIRQVDGNYLIFRTSWVYASRGKN 157
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
+ L + VLS D+ P + RD+ ++ L
Sbjct: 158 FLLTMLNLAQTKEVLS------VVSDQRGAPTWARDLAQMTL 193
>gi|302379941|ref|ZP_07268420.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
ACS-171-V-Col3]
gi|302312167|gb|EFK94169.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
ACS-171-V-Col3]
Length = 281
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L Q LD L + D D
Sbjct: 1 MTRNRIWISGADGKIGKVL------------------------QKYLDPLEDEVLATDKD 36
Query: 61 LKSGSGFDAVAL--KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T +
Sbjct: 37 IVDIVNSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVD 96
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S +
Sbjct: 97 AK--IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWL 154
Query: 178 YGP 180
+ P
Sbjct: 155 FSP 157
>gi|300710893|ref|YP_003736707.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|448297014|ref|ZP_21487064.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|299124576|gb|ADJ14915.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
gi|445580691|gb|ELY35069.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3]
Length = 283
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 28/254 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV G +G LG+ LL + E V T+++TP+ H V DV + G
Sbjct: 4 LLVTGASGLLGRCLL----DAEWSGGRVVGTYYTTPIES------GHETVHLDV--RDGE 51
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENLL 123
+ + PDVV++ AA + CE+DP A N + +V+ ++ +
Sbjct: 52 AVARLVERV-DPDVVIHSAAATSVEACEDDPKLAHGTNARGTKHVVDAATAVGAR----V 106
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I+ ST V+ + E+DE AP+N YG+SK+ E+++ I+R ++ +
Sbjct: 107 IYPSTAYVFGDGGPVHAEDDEPAPMNRYGRSKLDGERYVQAASPENTIVRFCVVV---NL 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
P W+ L GE+V D+ P + D + + L + + +
Sbjct: 164 GPADSPDFGSWVRGRLESGERVRLIDDQEITPTVLSDAIDALGYLV------EHETAGVF 217
Query: 244 NVGGPDRVSRVQMA 257
+V PDR++R ++
Sbjct: 218 HVASPDRLTRYELG 231
>gi|374849339|dbj|BAL52357.1| dTDP-4-dehydrorhamnose reductase [uncultured planctomycete]
Length = 288
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 31/238 (13%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
++DL +G G L +P VV+NCAA + E +P A ++N V L+ E
Sbjct: 32 ELDLAAG-GLATEVLAAYRPQVVLNCAAYNHVDQAEQEPQQAFAVNALG--VRELARACE 88
Query: 118 NKENLLIHLSTDQVY---EGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
+ L+H STD V+ G + Y E D+ PVNVYG SK+A E F+ I+R+
Sbjct: 89 KRGVFLVHFSTDYVFGLETGRRHPYTENDQPGPVNVYGVSKLAGEYFVRSITPYHLIVRT 148
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR 231
+YG P +++ +L + H D+ P V D+V +L R
Sbjct: 149 CGLYG----RPGQGGKRTNFVELILHQAATTPILHVVADQVCSPTCVPDLVDAVLQCLER 204
Query: 232 WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
L+ L+++ VS + A+ G+ A +S++ + P++++D
Sbjct: 205 GLTG------LVHLANEGAVSWYEFAQ---GILQVARLSVE---------LRPISWRD 244
>gi|347831528|emb|CCD47225.1| similar to methionine adenosyltransferase 2 subunit beta isoform 2
[Botryotinia fuckeliana]
Length = 315
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K L+ G TG LG+ +L+ + ++ T S P +L VDL S
Sbjct: 3 KTALITGATGLLGRQVLKVFDR---ENWNTVGTGFSRAKPPTILK----------VDLAS 49
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
A AL +P VV++CAA P C+NDP+ ++N+ +S L+ + L
Sbjct: 50 EPEV-AKALNESKPQVVIHCAANRFPDKCDNDPEGTRALNIAASAS--LAKLCAEQSIFL 106
Query: 124 IHLSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFA---ILRSS 175
+++STD V+ G + + Y+ P N+YG++K EK + YEK +LR
Sbjct: 107 VYISTDYVFPGTEGDAPYETSHIANPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRVP 166
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
++YG + + + K ++ H R P DV +++ + ++L
Sbjct: 167 VLYGEGEPEESAVGVLVNSVWKAQEKDANIKMDHWALRYPTNTEDVGRVLSEIATKYLES 226
Query: 236 DKQMQL--LLNVGGPDRVSRVQMAEV 259
L +L D+ ++ ++ ++
Sbjct: 227 KDPSSLPRVLQFSSEDKFTKYEICQL 252
>gi|303234358|ref|ZP_07320997.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
BVS033A4]
gi|302494474|gb|EFL54241.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna
BVS033A4]
Length = 281
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L Q LD L + D D
Sbjct: 1 MTRNRIWISGADGKIGKVL------------------------QKYLDPLEDEVLATDKD 36
Query: 61 LKSGSGFDAVAL--KFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+ D ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T +
Sbjct: 37 IVDIVNSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVD 96
Query: 119 KENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S +
Sbjct: 97 AK--IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWL 154
Query: 178 YGP 180
+ P
Sbjct: 155 FSP 157
>gi|341615212|ref|ZP_08702081.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Citromicrobium sp. JLT1363]
Length = 290
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 52 HSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPS 106
H VF D DL +G A ++ +PD+V++ AA + E++P+ AM+IN P
Sbjct: 23 HELVFAARPDFDLAD-AGSIARTIENARPDLVISAAAYTAVDQAEDEPELAMAINGEAPG 81
Query: 107 SLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK 165
+ +S ++HLSTD V++G + ++EED P+ VYG++K+A E+ +
Sbjct: 82 HIGRAAASVGAP----VVHLSTDYVFDGSGEHAWREEDPTGPIGVYGRTKLAGEQALAAS 137
Query: 166 CSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVV 222
AILR++ +Y P ++ ++L E + + D+ P D+
Sbjct: 138 GGAHAILRTAWVYSP---------FGNNFVKTMLRLAESRDALNVVKDQYGNPTSALDIA 188
Query: 223 KIILALTNRW 232
+LA+ +RW
Sbjct: 189 DALLAVADRW 198
>gi|169823956|ref|YP_001691567.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328]
gi|167830761|dbj|BAG07677.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328]
Length = 281
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS+ R+ + G G +G+ L + L E +V AT + ++D +
Sbjct: 1 MSRNRIWISGADGKIGKVLQKYLDPFED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P++++NC+AL+ P +C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNIIINCSALTDPVLCQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|381167150|ref|ZP_09876358.1| dTDP-4-dehydrorhamnose reductase [Phaeospirillum molischianum DSM
120]
gi|380683458|emb|CCG41170.1| dTDP-4-dehydrorhamnose reductase [Phaeospirillum molischianum DSM
120]
Length = 297
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A+ +PDVV+NCAA + EN+ D A +IN V L+ + +L+HLSTD
Sbjct: 46 AMAECRPDVVLNCAAYTAVDRAENETDLAHAINAQGPAV--LAELCGKRGIVLLHLSTDY 103
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
V++G K S Y +D ++P+ VYG +K A E+ + C +LR+S +Y
Sbjct: 104 VFDGTKASAYLPDDPVSPLGVYGATKEAGERAVRAACPQHFLLRTSWVY 152
>gi|187923382|ref|YP_001895024.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN]
gi|187714576|gb|ACD15800.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN]
Length = 306
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV-DLKS 63
+V V+G +G LG+ L+ L++ + V AT S P P V D+ D ++
Sbjct: 3 KVAVIGASGLLGRALVDELAQQSD--WQVVATAFSRPAP---------GKVSLDIRDARA 51
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
F ++ PD +V AA P VCE+DP A ++NV + V L+S +
Sbjct: 52 VEQF----VEREAPDALVIAAAERRPDVCEHDPALARALNVDA--VRTLASAANRRGAWT 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ +STD V++G Y+ + AP+N YG SK+ E + E +LR ++YGP
Sbjct: 106 LSISTDYVFDGTHPPYQHDSVPAPLNAYGHSKLEGEHALTESTDLGCVLRLPLLYGP 162
>gi|297587791|ref|ZP_06946435.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516]
gi|297574480|gb|EFH93200.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516]
Length = 281
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 25/181 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++ R+ + G G +G+ L + L +E +V AT + ++D +
Sbjct: 1 MTRNRIWISGADGKIGKVLQKYLDPLED---EVLAT------DKYIVDIV---------- 41
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S ++ + +P+V++NC+AL+ P C+ +PD A +N + +++ T + +
Sbjct: 42 ---NSDETSIFARRNRPNVIINCSALTDPVACQENPDEAFRVNALGARNMAVAANTVDAK 98
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+S D V+ G +S Y+E D P +YGKSK+ E F+ E ILR+S ++
Sbjct: 99 --IIHMSADDVFSGQSRSAYREYDTPHPTTMYGKSKLMGENFVREFSVKHFILRTSWLFS 156
Query: 180 P 180
P
Sbjct: 157 P 157
>gi|212555947|gb|ACJ28401.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3]
Length = 370
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 23/238 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALP------------H 52
+++V GG G L Q L + K + T + + Q L++ LP H
Sbjct: 6 KIMVTGGNGQLAQSLALIAHLSDAKVKASSFTRITADIVQALVNILPEVRNSLSEQDELH 65
Query: 53 SFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
+D+ + D ++ PDVV+NCAA + E D +SA +N + L
Sbjct: 66 LLSHRKLDICDSAAIDDAFMRVN-PDVVINCAAFNAVDNAETDSESAFKVNFEGPKL--L 122
Query: 113 SSFTENKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA- 170
+ + +LIH+S+D V+ G K S Y E+D P++VYGKSK+A E+ + + ++ A
Sbjct: 123 AERCKRDGVMLIHISSDFVFAGEKHSPYNEQDLPEPLSVYGKSKLAGEQAVRQVIASKAY 182
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I+R+S +Y Q + V + + + E+V D+ P + + II L
Sbjct: 183 IIRTSWLYSCQGNNFVHT------MQKLFAAKEQVSVIADQYGSPTWSEALAVIIFKL 234
>gi|337285226|ref|YP_004624700.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus yayanosii CH1]
gi|334901160|gb|AEH25428.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus yayanosii CH1]
Length = 285
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V+G TG LG +++ LSE P + L H DVD+
Sbjct: 2 RVAVIGATGQLGSDIVEVLSED----------------PTFEVIPLTHD----DVDVTIP 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + +P+V++N AA E P+ A +N +L ++ E + +
Sbjct: 42 ESLKVI--ERIKPEVIINTAAYVRVDDSELYPEEAFKVNAIGALN--VAKIAEKINAVNV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K YKEED P+NVYG SK+ E F S ++R + +YG +
Sbjct: 98 YISTDYVFDGEKGKPYKEEDPPNPINVYGASKLMGEIFTRNYSSKHYVIRVASLYGRRGA 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+ ++W+ +GEK++ +D+ P Y +DV
Sbjct: 158 RGKGGNF-VEWVIEKARRGEKLKIVNDQLMSPTYTKDV 194
>gi|221134348|ref|ZP_03560653.1| dTDP-4-dehydrorhamnose reductase [Glaciecola sp. HTCC2999]
Length = 286
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+V+NCAA + + E +P+ A IN + L+ + LIHLSTD V++G
Sbjct: 51 RPDIVINCAAYTAVDLAEKEPERAFLIN--ETGCENLAIACVKYDVHLIHLSTDYVFDGT 108
Query: 136 KSFYKEEDEI-APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
KS E ++I P+NVYG+SK+A E+ I S + ILR S ++G + V L +
Sbjct: 109 KSLPYESNDIPNPINVYGQSKLAGEQKIIHLLSRYTILRVSWVFGQYGNNFVKTMLRLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+E +D+ P D+ I + + + +L+ G VS
Sbjct: 168 -----ENNTHLEIINDQLGGPTAANDIAMICVNIA----QNSDRFTGILHFSGTPFVSWA 218
Query: 255 QMAEVDRGVQSPADISMDITKLVQTLNIDPVTYK 288
Q AE + A I I + + I + YK
Sbjct: 219 QFAE---AIFRTAHIEGAIKSVPSVVPIKSIDYK 249
>gi|56476692|ref|YP_158281.1| dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1]
gi|56312735|emb|CAI07380.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum
EbN1]
Length = 298
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PDV++N AA + E+D +A IN P L + + LL+H STD V++
Sbjct: 50 EPDVIINAAAYTAVDRAESDEAAATLINGVAPGELAR----VAKRRGALLVHYSTDYVFD 105
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G KS Y E+D +AP+N YG+SK+A E I E + I R++ ++ + +
Sbjct: 106 GTKSAPYDEDDPVAPINAYGRSKLAGELAIGESGCDHLIFRTTWVFAARGGN-------- 157
Query: 193 QWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSEDKQ 238
++ ++L G + + H D+ P + R++ R +E +Q
Sbjct: 158 -FVRTMLRLGAERDSLHVVADQIGAPTWARNIADATALALARAQAERQQ 205
>gi|397685953|ref|YP_006523272.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
gi|395807509|gb|AFN76914.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 10701]
Length = 268
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ QP +++N AA + E + A ++N V +L+ L+H+ST
Sbjct: 11 ARAVRQLQPGLIINAAAYTHVDNAETHAEQAYAVNRDG--VGYLAEAAREAGIPLLHIST 68
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G + Y+E D ++P VYG SK A E+ + + ILR+S ++G + V
Sbjct: 69 DYVFSGAANAPYRETDSVSPTGVYGASKQAGEEAVRSRLEQHLILRTSWVFGAHGHNFVK 128
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG 247
L + LS +D+ CP Y + +++LAL R ++ L + GG
Sbjct: 129 TMLRLARQRDALS------VVNDQVGCPTYAGSIAEVLLALAARHARREELAWGLYHFGG 182
>gi|218245359|ref|YP_002370730.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
gi|218165837|gb|ACK64574.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801]
Length = 296
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 36/225 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P++++N AA + E +P+ A+++N + + ++ L+H+STD V++G
Sbjct: 52 HPNIIINGAAYTAVDQAEKEPELALAVNGIAPTI--IAEEAHKLGAFLLHISTDYVFDGT 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y EED P++VYG+SK+A E+ I + + ILR++ +YG S +
Sbjct: 110 KNIPYTEEDPTHPLSVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKS--------NF 161
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRV 251
+ ++L G E++ D+ P + +D+ + I Q+ L L++ +
Sbjct: 162 VKTMLRLGQEREQIRVVSDQIGSPTWAQDIAQTI-----------NQLLLTLDLKNTAEI 210
Query: 252 SRVQMAEVDRGVQSPADISMDITKLVQTL-------NIDPVTYKD 289
+ GV S D ++ I + Q + +DP+T D
Sbjct: 211 YHF----TNSGVASWYDFAVTIFEEAQNIGFPLKVQQVDPITTAD 251
>gi|63054927|gb|AAY29004.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia]
Length = 299
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 131/318 (41%), Gaps = 53/318 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G G +GQ LL+ L+ + VA T T L + +P FD
Sbjct: 3 VLLFGANGQVGQELLRSLAPLGSI---VATTRSGT-----LANGVPCEVADFD-----NP 49
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
G L PD VVN AA + E D ++A N P + W ++ L
Sbjct: 50 GSLVALLDRVHPDTVVNAAAYTAVDRAEQDREAAWRTNAESPGVIARWCAA----AGVPL 105
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD V++G + Y+E D P+ VYG+SK+A E I E I R++ +Y P +
Sbjct: 106 VHFSTDYVFDGQGTRPYRESDPTGPLGVYGESKLAGEIAIREAGGRHLIFRTAWVYAPHS 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCP---VYVRDVVKIIL----ALTNRW 232
+ ++ ++L G + + D+ P + DV + L L+ W
Sbjct: 166 AN---------FLRTMLRVGAERDLLRVVADQVGTPTPAALIADVTALALQHPGQLSGTW 216
Query: 233 -LSEDKQMQL----------LLNVGGPDRVSRVQ---MAEVDRGVQSPADISMDITKLVQ 278
L+ + + G R RV+ A+ + PA +D+T+L
Sbjct: 217 HLTATGEASWHGFAEAIFAAAVARGVLPRAPRVEAITTADYPTPARRPAYSHLDVTRLQS 276
Query: 279 TLNIDPVTYKDGVKLTLA 296
ID T++DG+ +A
Sbjct: 277 DFGIDLPTWQDGLAQVMA 294
>gi|75909561|ref|YP_323857.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis
ATCC 29413]
gi|75703286|gb|ABA22962.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413]
Length = 296
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ +L++GG G +GQ + Q L+ P +++ A P +DL
Sbjct: 3 ESILLIGGNGQVGQEIHQILA----------------PKYKVISAARPR------IDLTQ 40
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ ++ QP +++N AA + E +P+ A +IN + + ++ ++ + L
Sbjct: 41 ADSLRQI-IQEVQPQIIINAAAYTAVDKAETEPEIATAINATAPQI--IAEESQKLGSFL 97
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G +S Y+E D P++VYGK+K+A E I + ILR++ +YG
Sbjct: 98 IHISTDYVFDGQQSHPYQETDPTNPLSVYGKTKLAGEIAIQQTHPQHLILRTAWVYG--- 154
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
KS ++ + + ++ +++ D+ P + +D+ I
Sbjct: 155 --SFGKSNFVKTMLRLGAERQEIRVVKDQIGSPTWAQDIADTI 195
>gi|225556964|gb|EEH05251.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus G186AR]
Length = 329
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 2 QRTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD---- 56
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ V + +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L
Sbjct: 57 -----EGVMITGLKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSIL 109
Query: 123 LIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSII 177
LI++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++
Sbjct: 110 LIYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVL 169
Query: 178 YGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
YGP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 170 YGPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLS 227
>gi|325093589|gb|EGC46899.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H88]
Length = 332
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L+ +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L+
Sbjct: 57 -EGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSILI 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++Y
Sbjct: 114 IYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRGCGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLS 230
>gi|262193435|ref|YP_003264644.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365]
gi|262076782|gb|ACY12751.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365]
Length = 281
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 68 DAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSS--LVNWLSSFTENKENLL 123
D VA F QPD+V++CA + CE PD A +NV S L++ L + T +
Sbjct: 45 DRVAALFAREQPDMVLHCAGVCDVAKCEESPDFAHLVNVLSMDILLDHLPAHTR-----V 99
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I+LS+D V+ G Y E P++VYG+++V AE+ + ++ + I+R + GP
Sbjct: 100 IYLSSDHVFSGDSGPYTESTPPDPLSVYGRTRVQAERILLDRRPDSLIIRGGLWIGPSYN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ + W+ ++G + DE R V+ D V ++AL +S + +
Sbjct: 160 GRLGH---LDWLRYRHARGLPMTVITDEHRSAVWADDAVARVMALAEAGVSGTRHL 212
>gi|418408817|ref|ZP_12982131.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens 5A]
gi|358004833|gb|EHJ97160.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens 5A]
Length = 297
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 33/254 (12%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PDVVV+ AA + E++PD A ++N + ++ +IH+STD
Sbjct: 45 ALRDAKPDVVVSAAAYTAVDKAESEPDIAFAVNRDGAKA--VARAANEIGVPVIHISTDY 102
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K+ Y E D P +VYG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKTTAYVENDPTGPASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------------------ 231
L + +++ D+ CP D+ I+++ R
Sbjct: 163 LRLS------ESRDEINVVADQFGCPTSANDIAIAIVSIAKRLATDPSAHLRGVFHMSGT 216
Query: 232 ----WLSEDKQMQLLL--NVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
W KQ+ N G V+ + A+ Q PA+ +D KL + I
Sbjct: 217 GETNWAGFAKQIFAFSAENGGKSIVVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIRLP 276
Query: 286 TYKDGVKLTLAAEA 299
++ + +AA A
Sbjct: 277 EWQTSTRAVMAALA 290
>gi|240277510|gb|EER41018.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H143]
Length = 332
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L+ +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ L+
Sbjct: 57 -EGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRS--LARATSSRSILI 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE---KCSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E +C +LR ++Y
Sbjct: 114 IYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRECGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPARQNSESAINTLVDAVWKAQDANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLS 230
>gi|300866608|ref|ZP_07111296.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506]
gi|300335380|emb|CBN56456.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506]
Length = 290
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 42/253 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P++VVNCAA + E++P+ A ++N + + L+ E LIH+STD V+ G
Sbjct: 50 KPNLVVNCAAYTAVDKAESEPELANAVNGIAPGI--LAEECEKLGATLIHISTDYVFGGS 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ + Y E D P+ VYGKSK+A E I + I+R++ +YG +
Sbjct: 108 QGYPYCETDTTNPLGVYGKSKLAGELSIIKALDRHIIIRTAWVYGNGGKG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTN------------------RW- 232
+ ++L G E++ D+ P + D+ I +T+ W
Sbjct: 160 VKTMLRLGKDREEIRVVADQIGSPTWTGDLAAAISQITSSIRPEIFGTYHYTNSGVASWY 219
Query: 233 ------LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
E KQ+ L V RV + E + PA + TK+ L P
Sbjct: 220 DFAVAIFEEAKQLGFSLKV---KRVIPITTPEYPTPAKRPAYSVLSSTKISAVLGSHPPH 276
Query: 287 YKDGVKLTLAAEA 299
+++G++ LA EA
Sbjct: 277 WREGLRQMLAREA 289
>gi|344202675|ref|YP_004787818.1| dTDP-4-dehydrorhamnose reductase [Muricauda ruestringensis DSM
13258]
gi|343954597|gb|AEM70396.1| dTDP-4-dehydrorhamnose reductase [Muricauda ruestringensis DSM
13258]
Length = 258
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 25/195 (12%)
Query: 45 LLLDALPHSF--VFFDVDLKSGSGFDAV-------ALKFGQPDVVVNCAALSVPRVCEND 95
L L H F VFFD K+ + D A + Q D +NCAA + E
Sbjct: 15 LTLQEQSHDFPEVFFD--FKASAALDITQPAQLVDAFQKRQYDFCINCAAYTHVEDAEKH 72
Query: 96 PDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKS 154
P+ A S+N V L+ + LIH+STD V++G K Y D+ P+N YG+S
Sbjct: 73 PEKAFSVNAEG--VKNLAEVCRDHTTTLIHISTDYVFDGEKEDPYTVNDKTNPINEYGRS 130
Query: 155 KVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSK---GEKVEFFHDE 211
K+ E+FI E N I+RSS +Y K + ++L K GE + + +
Sbjct: 131 KLRGERFIQEILPNHYIIRSSWLYS--------KKFGHNFYRTILKKALAGEDLYITNAQ 182
Query: 212 CRCPVYVRDVVKIIL 226
CP + + IL
Sbjct: 183 KGCPTDTETLAEFIL 197
>gi|78186306|ref|YP_374349.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273]
gi|78166208|gb|ABB23306.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273]
Length = 288
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---VDLK 62
+LV GG G LG L Q L + G H F+F D +D+
Sbjct: 3 ILVAGGRGQLGSEL-QALRKGAGA----------------------HRFLFLDRPDLDIT 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+F QPDVVVN AA + E D ++A +N + V L+ + +
Sbjct: 40 DSGSVRGAFDRF-QPDVVVNAAAYTAVDRAEEDREAAFLVNRDGAGV--LAGCSRDAGAF 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IH+STD V++G S Y+EED P VYG+SK E+ + + AI+R+S +Y
Sbjct: 97 FIHVSTDYVFDGTASRPYREEDMPCPEGVYGRSKFEGERLVASVDPSHAIIRTSWLYSAY 156
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + + E + D+ P + D+ +L + R
Sbjct: 157 GQNFVKTMLRLG------RERESLGVVFDQTGTPTHAADLASAVLHIALR 200
>gi|164507700|emb|CAL64846.1| putative 2-epi-5-epi-valiolone dehydratase/epimerase GacO
[Streptomyces glaucescens]
Length = 307
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 16/143 (11%)
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+ +STD V++G + E+ + P N YG++K+AAE+ + + ++ +LR S++YG +
Sbjct: 110 LLLVSTDNVFDGSRPDNSEDTPVCPANAYGRAKLAAERTVLDAAADAVVLRVSLVYGHEP 169
Query: 183 ISPVPKSLPIQWID------SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+W++ L +GE+V D+ PV V DV ++ A+ L
Sbjct: 170 ADAG------KWLNFFAACAHRLLRGEQVTVPEDQWTTPVLVDDVARVTAAV----LFAG 219
Query: 237 KQMQLLLNVGGPDRVSRVQMAEV 259
+ +L++GGPDRVSR A V
Sbjct: 220 GAVPPVLHLGGPDRVSRAAWASV 242
>gi|416409480|ref|ZP_11688470.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
gi|357260611|gb|EHJ10001.1| dTDP-4-dehydrorhamnose reductase [Crocosphaera watsonii WH 0003]
Length = 294
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G +G+ L Q L + ++ AT+ +DL S
Sbjct: 2 KKILLTGSDGQVGRDLQQTLVPMG----EIIATNRQ------------------QLDLTS 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V ++ +PD++VN AA + E++ D A +IN + + ++ + L
Sbjct: 40 PDNIRQV-IQETKPDIIVNSAAYTAVDKAESEVDLAFAINGIAPAI--MAEEAKKIGAFL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V++G K+ Y E D P+ VYG+SK+A E+ I + + ILR++ +YG Q
Sbjct: 97 LHISTDYVFDGTKNTPYLETDVTHPLGVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTQG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQMQL 241
K++ D E++ D+ P + D+ + I LTN L+E ++
Sbjct: 157 KGNFVKTMLRLGKDK-----EQLGIVSDQVGSPTWSYDIAQTITQILTNLNLAEARETYH 211
Query: 242 LLNVG 246
N G
Sbjct: 212 FTNSG 216
>gi|283779730|ref|YP_003370485.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068]
gi|283438183|gb|ADB16625.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068]
Length = 346
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Query: 79 VVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF 138
V+NC + CE DP A +N+ +S+ N L + L+HLS D V+ GV
Sbjct: 75 AVLNCEGTCKLKSCELDPSMARRVNI-TSVENLLRAM-RGTSTRLVHLSIDLVFSGVGPG 132
Query: 139 YKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDS 197
ED PV +YG + AE+ I S ILR S+ P +S + I WI S
Sbjct: 133 NIREDATPDPVTIYGSTMAEAEQLILTDKSEATILRISL---PMGVSFNGHAGAIDWIQS 189
Query: 198 VLSKGEKVEFFHDECRCPVYV------------RDVVKIILALTNRWLSEDKQMQLLLNV 245
K + DE R P Y R++ + A R LS + Q++ V
Sbjct: 190 RFKKHRPATLYFDELRTPTYTDCLNPLLEEVLARELPGLYHAGGTRRLSLYEIAQIVNRV 249
Query: 246 GG--PDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
GG P+ + E D++MD +KL L P
Sbjct: 250 GGYAPEHLMGCMRLEAGPIPPRAGDVTMDSSKLTAALGHQP 290
>gi|222148464|ref|YP_002549421.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
gi|221735452|gb|ACM36415.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
Length = 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 30/232 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR LV G G + Q LL+ S+ K D+ A PQL DL
Sbjct: 5 KRYLVTGLAGQVVQSLLEKASD--RKDIDLVALGR----PQL--------------DLAD 44
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A A++ +PD++++ AA + E D +A ++N L+ + + +
Sbjct: 45 AATIEA-AVRAAKPDLIISAAAYTAVDQAETDEAAAFAVNGEGP--GELARVAKALDIPI 101
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K S Y E D +AP+ VYG+SK+ E+ + + N AILR++ +Y
Sbjct: 102 IHISTDYVFDGSKASPYNEADPVAPLGVYGRSKLEGERRVAAETDNHAILRTAWVY---- 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
SP K+ + + ++ E + D+ P D+ +L + + LS
Sbjct: 158 -SPFGKNFLLTMLRLAETRDE-LGVVADQIGNPTSALDIADAVLKVADNLLS 207
>gi|379710544|ref|YP_005265749.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Nocardia cyriacigeorgica GUH-2]
gi|374848043|emb|CCF65115.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Nocardia cyriacigeorgica GUH-2]
Length = 293
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 52 HSFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNW 111
+F ++D+ AV G DVV+NCAA + E++P +A + N V
Sbjct: 40 RAFGHRELDITDAGAVRAV---VGPGDVVINCAAFTNVDAAESEPAAAFAANETGPAV-- 94
Query: 112 LSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA 170
L++ LIH+STD V++G + Y+ D AP++VYG+SK+A E+ + E +
Sbjct: 95 LAAVCAEAGARLIHISTDYVFDGTATRPYETSDRTAPLSVYGQSKLAGEQAVLESEAQAH 154
Query: 171 ILRSSIIYGPQTISPVPKSLPIQWIDSVLS-KGEK--VEFFHDECRCPVYVRDVVKIILA 227
++R+S ++ ++ ++ ++L +GE+ ++ D+ CP Y D LA
Sbjct: 155 VVRTSWVF---------RAAGGDFVATMLKLEGERDTIDVVDDQLSCPTYGGD-----LA 200
Query: 228 LTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEV 259
L L+ Q LL+ SR +A
Sbjct: 201 LGLLELAHTPQAPRLLHATNSGTASRFDLARA 232
>gi|410087606|ref|ZP_11284309.1| dTDP-4-dehydrorhamnose reductase [Morganella morganii SC01]
gi|409766050|gb|EKN50148.1| dTDP-4-dehydrorhamnose reductase [Morganella morganii SC01]
Length = 299
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD++VN AA + E D ++A +IN S V L+ + + LIH STD V+ G
Sbjct: 54 QPDIIVNAAAYTAVDNAEKDQENAYTIN--SDSVRILAKIAKKHDIWLIHYSTDYVFNGN 111
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+++KE D+ AP+N+YG SK+ E I E C + I R+S +Y +
Sbjct: 112 GNNYWKENDKPAPLNIYGLSKLKGEYAIIENCHKYIIFRTSWVYAAK 158
>gi|67902090|ref|XP_681301.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4]
gi|40740464|gb|EAA59654.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4]
gi|259480783|tpe|CBF73741.1| TPA: NAD dependent epimerase/dehydratase family protein
(AFU_orthologue; AFUA_5G02240) [Aspergillus nidulans
FGSC A4]
Length = 314
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV----DL 61
VLV G TG LG+ + +D + Q A P + + D+ D+
Sbjct: 5 VLVTGATGLLGRQV-----------FDKFKRSGCLTVGQGFSRANPPTILKSDLEKPDDI 53
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
K L +P +V++CAA P +C+ DP+ A +NV ++ L+ T +
Sbjct: 54 KG-------LLDEAKPQIVIHCAANRSPDLCDKDPERARRVNVDATRT--LAELTAERNI 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE---KCSNFAILRSSI 176
LL+++STD V+ GV ++ Y+ + P N+YG+ K E+ + E K ILR +
Sbjct: 105 LLVYISTDYVFPGVEGEAPYEADAPTKPPNLYGELKRDGEQVVLEATKKSGMGIILRVPV 164
Query: 177 IYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWL 233
+YG T + +S +DSV ++ E D+ R P DV +++ + ++L
Sbjct: 165 LYG--TANENSESAVNTLVDSVWKAQDENAGIKMDDWAQRYPTNTEDVARVLRDIVIKYL 222
Query: 234 SEDKQMQLL---LNVGGPDRVSRVQMAE 258
E Q+ L L D++++ +M E
Sbjct: 223 KERGQIMKLPKILQFSSEDKMTKYEMCE 250
>gi|224369262|ref|YP_002603426.1| protein RfbD [Desulfobacterium autotrophicum HRM2]
gi|223691979|gb|ACN15262.1| RfbD [Desulfobacterium autotrophicum HRM2]
Length = 291
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GGTG LGQ + V +HS SF D+D+
Sbjct: 2 RILICGGTGQLGQDCTR-----------VFNKNHSV-----------QSFGSRDLDISDP 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + P+VV+NCAA + CE++ D A +N + L+ + L++
Sbjct: 40 DLVERTIRELA-PEVVINCAAYTNVDGCEDNRDHAFHVNAVGA--ENLARSCRTVDALMV 96
Query: 125 HLSTDQVYEGVKS---FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H+STD V++G K Y E D AP+NVYG SK+ EK + I+R++ +YG Q
Sbjct: 97 HISTDYVFDGKKEPPLTYAETDPTAPLNVYGASKLEGEKRVAALLEKQIIVRTAWLYGAQ 156
>gi|154285112|ref|XP_001543351.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150406992|gb|EDN02533.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 332
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ L+ G TG LG+ +L E + ++V S + +D+ D
Sbjct: 3 RTALITGATGLLGRQVLNAF-ERDSTNWNVVGQGFSRAGTRTDMDSEIVKADLLD----- 56
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G L +P+VVV+CAA P C+ +PD+A INV ++ L+ T ++ LL
Sbjct: 57 -EGEIVALLDRTKPNVVVHCAANRFPDKCDQNPDAARKINVVATRS--LARATSSRSILL 113
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEK---CSNFAILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ C +LR ++Y
Sbjct: 114 IYISTDYVFPGRAGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVLY 173
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
GP + S + + W + G +++ + R P + DV ++ + R+LS
Sbjct: 174 GPALQNSESAINTLVDAVWKAQNANAGVQMDDW--AIRYPTHTADVGRVCRDIAARYLS 230
>gi|402486234|ref|ZP_10833066.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CCGE 510]
gi|401814890|gb|EJT07220.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CCGE 510]
Length = 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+V+ AA + E+D + A S+N + + +IH+STD V+ G
Sbjct: 51 RPDVIVSAAAYTAVDKAESDAELAFSVNAAGAGAVAEACARIGVP--VIHISTDYVFSGD 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y EED APV+VYG+SK+A E + N ILR++ +Y P +
Sbjct: 109 KASAYSEEDATAPVSVYGRSKLAGETAVAAANPNHVILRTAWVYSP---------FGTNF 159
Query: 195 IDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNRWLSE 235
+ ++L E + D+ CP D+ ILA+ R +++
Sbjct: 160 LKTMLRLSETRDHLRVVADQTGCPTSALDIADAILAIATRIVAD 203
>gi|304310332|ref|YP_003809930.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1]
gi|301796065|emb|CBL44269.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1]
Length = 301
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 22/178 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G +G L + L+ PL +++ AL + DL +
Sbjct: 2 KLLIFGKNGQVGWELQRSLA----------------PLGEVI--ALGQNEANLCGDLSNL 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G A L+ PDV+VN AA + E++PD A IN + V ++ + LL+
Sbjct: 44 EGLRAT-LQRVAPDVIVNAAAHTAVDRAESEPDLAYRINAEAPSV--MAEEAQRLGALLV 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H STD VYEG + F++E D AP+N+YGKSK+A ++ I I R+S +Y +
Sbjct: 101 HYSTDYVYEGSGERFWQESDAPAPLNLYGKSKLAGDQAIMASGCRHLIFRTSWVYAAR 158
>gi|149925746|ref|ZP_01914010.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105]
gi|149825863|gb|EDM85071.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105]
Length = 337
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV+G G LG + Q H+ P +DA + + D
Sbjct: 26 RVLVLGAQGQLGHTIGQ----------------HAKPALMETMDAC----ISYGRDKADL 65
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S D + ALK +PDVV+N AA + E + + A +IN + V L+ + +
Sbjct: 66 SKLDTLINALKDIRPDVVINAAAYTNVEKAETETELAHTINAKA--VGILAEQCKKQGVA 123
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H STD V++G S Y E D P++ YGKSK+ EK++ E N+ + R+S +YG
Sbjct: 124 LVHYSTDYVFDGKASQPYTETDATNPLSAYGKSKLEGEKYLKEVGGNWVVFRTSWVYG 181
>gi|346325337|gb|EGX94934.1| NAD dependent epimerase/dehydratase family protein [Cordyceps
militaris CM01]
Length = 315
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 51/315 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + V+V G TG LG+ + + K ++V T S VD
Sbjct: 1 MVDRTVVVTGATGLLGRQVSRAFRR---KGWNVKGTGLSRA----------DGVDVLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S D + L+ P+V+V+CAA P E DP+ A +NV S + L+ K
Sbjct: 48 LGNASEIDKL-LEETNPEVIVHCAAERFPDKVEKDPEGARKLNV--SATSSLAQAAAAKG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIY----EKCSNFAILRS 174
LI++STD V+ G ++ Y+ + E +P N+YG++K+ EK K + +LR
Sbjct: 105 AFLIYISTDYVFPGRLGEAPYEADSETSPPNLYGQTKLDGEKAALMADGGKPGSAVVLRV 164
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNR 231
++YG +P ++ + +DSV S+ E F D R P D ++ +
Sbjct: 165 PVLYG-SAETPAESAVNVL-LDSVWKSQTEDKRFKMDHWAPRYPTNTEDAARVCHDIAEH 222
Query: 232 WLSEDKQMQL--LLNVGGPDRVSRVQM----AEV-----------------DRGVQSPAD 268
+L + L +L DR+++ +M AE+ + VQ P D
Sbjct: 223 YLGAADRASLPKILQFSSEDRMTKYEMCQKFAEIMGLPADNIEPNTEGNDPNAAVQRPYD 282
Query: 269 ISMDITKLVQTLNID 283
+ TK +++L+ID
Sbjct: 283 THLS-TKTLKSLDID 296
>gi|442322017|ref|YP_007362038.1| dTDP-4-dehydrorhamnose reductase [Myxococcus stipitatus DSM 14675]
gi|441489659|gb|AGC46354.1| dTDP-4-dehydrorhamnose reductase [Myxococcus stipitatus DSM 14675]
Length = 300
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 53 SFVFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWL 112
++ + VDL + A AL PDVV++CA+++ CE + ++A + NV ++
Sbjct: 40 TYDYVSVDLTRDADV-AQALSSAAPDVVIHCASMTDVDSCEKNAEAAYAANVQATAAVAR 98
Query: 113 SSFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL 172
+ T L+H+STD V++G Y E P VY +K E+ + AI
Sbjct: 99 GARTAGAH--LVHVSTDYVFDGDAGPYDEAAVPNPRGVYALTKHLGEQTVRVLAPGSAIA 156
Query: 173 RSSIIYGPQTISPVPKSLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R++++YG PV L W+ + LSKG+ V F D+ P +V +++ L R
Sbjct: 157 RTAVVYG---WPPVEGRLNFGAWLVTNLSKGQSVRLFDDQIVSPSLADNVAAMLVELGER 213
Query: 232 WLS 234
L
Sbjct: 214 KLG 216
>gi|134291975|ref|YP_001115744.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4]
gi|134135164|gb|ABO59489.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4]
Length = 317
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+S+ +L++G +G LG+ + LS E VA ++ + P DV
Sbjct: 4 VSQPTILLIGASGLLGRAVAAALSR-EASLTLVATIRNADTAGARRVALPPEHTARLDV- 61
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE+DP +A +INV + + +
Sbjct: 62 ------LDQPALERLFDARRPSAVIVCAAERRPDVCESDPSAARAINVDAPAR--IGALA 113
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR +
Sbjct: 114 ARYGAWTLGISTDYVFDGRAAPYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPL 173
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSK------------GEKVEFFHDECRCPVYVRDVVKI 224
+YGP + W +S ++ E R P Y DV ++
Sbjct: 174 LYGPI----------VDWRESAVTSLVPAIVAAAQPGAEPARMDAWAIRYPTYTPDVAQV 223
Query: 225 ILALTNRWLS 234
I LT R L+
Sbjct: 224 IRDLTLRHLA 233
>gi|376004466|ref|ZP_09782162.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Arthrospira sp. PCC 8005]
gi|375327155|emb|CCE17915.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Arthrospira sp. PCC 8005]
Length = 292
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP++VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 QPNIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG 214
>gi|407769965|ref|ZP_11117338.1| dTDP-4-dehydrorhamnose reductase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407287109|gb|EKF12592.1| dTDP-4-dehydrorhamnose reductase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 300
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ QP V++N AA + + END ++A IN + V+ ++ ++ + LIH ST
Sbjct: 46 ASAIRDNQPHVIINAAAYTAVDLAENDRENAYHINCDA--VDMMARAADDLDIPLIHFST 103
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G Y E+D +AP+ VYG SK+A E + I R++ +Y SP
Sbjct: 104 DYVFDGASQRPYCEDDSVAPLGVYGASKLAGEGAVRAATKRHLIFRTAWVY-----SPFG 158
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
K+ ++ + ++++ + + +D+ CP D+ L L
Sbjct: 159 KNF-VKTMLGLMTQRDVLTIVNDQHGCPTSAIDLANATLRL 198
>gi|221198982|ref|ZP_03572027.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M]
gi|221205242|ref|ZP_03578258.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2]
gi|221175033|gb|EEE07464.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2]
gi|221181433|gb|EEE13835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M]
Length = 316
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 18/234 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
++G +G LG+ ++ LS + +A + LL P DV
Sbjct: 1 MIGASGLLGRAVVASLSR-DPAFATIATIRNRDTRGARLLAPPPDKIAMLDV-------L 52
Query: 68 DAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 53 DRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPAR--IGALAARYGAWT 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP--- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 111 LGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIAD 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ S V +P + S + E V R P Y DV +I L +R L+
Sbjct: 171 WSESAVTSLVP-AIVASARAGAEAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA 223
>gi|392561860|gb|EIW55041.1| NAD-P-binding protein [Trametes versicolor FP-101664 SS1]
Length = 301
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+++ G +G LG + + + V HS P QL +DL
Sbjct: 3 RIIITGASGVLGSAVYAAFTSAG---HTVLGLAHSRPTGQLE-----------QLDLTDY 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ V KF PD V++CAA P V E DP++A +NV S+ L+ ++ ++ L+
Sbjct: 49 DKTEQVFSKFA-PDWVIHCAAERRPDVAEKDPEAARKLNV--SVPESLAQLSKKLKHKLV 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIYGPQTI 183
++STD V++G Y P+N+YG++K E + S +LR ++YGP
Sbjct: 106 YISTDYVFDGTSPPYTPSSPTNPLNLYGQTKRDGEIAVLGVSDSQSIVLRVPVLYGP--- 162
Query: 184 SPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
+P I + V+S G++ + H R P V D+ ++ L+ L + +
Sbjct: 163 APNNSDSAINILLDVVSDQSGKQYKMDHYATRYPTNVVDIADFLVRLSG--LPASRVIPP 220
Query: 242 LLNVGGPDRVSRVQM 256
+L+ G + ++ ++
Sbjct: 221 ILHYSGGEPFTKYEI 235
>gi|333375129|ref|ZP_08466953.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330]
gi|332971546|gb|EGK10496.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330]
Length = 308
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 33/252 (13%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K + L+ G G +G L+ ++++GK AA + LD VF
Sbjct: 16 KMKYLITGANGQVGSQLV---AQLQGKAEIFAADRAT-------LDITNRETVF------ 59
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
A + +PD+++N AA + E++PD A +IN + L+ + +
Sbjct: 60 -------QAARTFRPDIIINAAAHTAVDKAESEPDLAHAINCTGA--ENLALAAQEVGAI 110
Query: 123 LIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++H+STD V++G ++ Y+E D +AP + YGKSK+A E+ + C+ ILR++ ++G
Sbjct: 111 VLHISTDYVFDGKGETAYRETDPVAPQSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEH 170
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQ 240
+ V L + + + + D+ P Y D+ ++ + + +++ D ++
Sbjct: 171 GNNFVKTMLRLG------ASRDTLGVVADQFGSPTYAGDIAAALIVMAEQIVNQKDNELF 224
Query: 241 LLLNVGGPDRVS 252
+ + G VS
Sbjct: 225 GVYHFSGSPYVS 236
>gi|225568040|ref|ZP_03777065.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM
15053]
gi|225163136|gb|EEG75755.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM
15053]
Length = 286
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG+ PDV++NCAA++ +CE P+ A +N + LS ++ LST
Sbjct: 45 ISFGEINRPDVIINCAAVTDTALCEEQPELAYRVNALGARN--LSIVARKTGAKIVQLST 102
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G+ + Y E D+ P VYG+SK A E ++ E I+RS+ +YG
Sbjct: 103 DDVFDGLSTTPYSEFDDTNPRTVYGRSKRAGENYVKEFTHKHFIVRSNWVYGKGD----- 157
Query: 188 KSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
+++SVL K +++ D+ P RD+ ++IL L
Sbjct: 158 -----NFVNSVLEKAGSQKQLSVAADQFGSPTSARDLGRLILYL 196
>gi|404497328|ref|YP_006721434.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15]
gi|418065780|ref|ZP_12703150.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens RCH3]
gi|78194930|gb|ABB32697.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15]
gi|373561578|gb|EHP87809.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens RCH3]
Length = 280
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LVVG G LGQ L++ L P DV ++D+ S
Sbjct: 2 ILVVGAKGMLGQDLMRVL------PGDVRGVD------------------IEEIDITSPE 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
V L +P VVVNCAA + CE + D AM +N V L++ T LL+
Sbjct: 38 SVRRVLLTL-KPRVVVNCAAYTDVDGCETNVDLAMRVN--GDGVGHLAAATREIGALLVQ 94
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V++G K Y E+D + P++VYGKSK+ EK E + I+R+ +YG
Sbjct: 95 VSTDYVFDGTKGTPYVEDDRVNPLSVYGKSKLVGEKKARENPDHL-IVRTQWLYG 148
>gi|392550534|ref|ZP_10297671.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas spongiae
UST010723-006]
Length = 294
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPL-PQLLLDALPHSFVFFDVDLK 62
K+VL+ G TG LG+ L++ +E +DV T S P + LD H V
Sbjct: 2 KKVLITGATGLLGRALVRIFNE---NGFDVIGTGFSRAQSPIVKLDLTQHITV------- 51
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F L +PD++++ AA P VCEN+ ++N+ S+ LS
Sbjct: 52 --TQF----LDETKPDIIIHAAAERKPDVCENNHAHTKALNL--SVTEHLSREAARLNAQ 103
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V++G Y E D + P+N YG++K E+ + C ++R ++YG
Sbjct: 104 FFFISTDYVFDGKTPPYSESDTLNPLNFYGETKAQGEQIVLNTCKTHTVIRVPVLYG 160
>gi|357053898|ref|ZP_09114990.1| dTDP-4-dehydrorhamnose reductase [Clostridium clostridioforme
2_1_49FAA]
gi|355385524|gb|EHG32576.1| dTDP-4-dehydrorhamnose reductase [Clostridium clostridioforme
2_1_49FAA]
Length = 297
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 46 LLDALPHSFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSIN 103
+L + P + DVD + +AV +P +VNCA L+ CE P+ A +N
Sbjct: 20 ILASRPVELLLTDVDSVDITDSEAVMEYAHINRPHYIVNCAGLTDVAACEVRPEEAYRVN 79
Query: 104 VPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFI 162
+ LS ++ L+ +STD V++G ++ Y E D ++P VYGKSK+A E F+
Sbjct: 80 ALGA--RNLSVAARMGKSRLVQMSTDDVFDGESQTPYTEFDPVSPRTVYGKSKMAGENFV 137
Query: 163 YEKCSNFAILRSSIIYG 179
E C+ I+RSS I+G
Sbjct: 138 REFCNRHIIVRSSWIFG 154
>gi|160942044|ref|ZP_02089359.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC
BAA-613]
gi|158434935|gb|EDP12702.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC
BAA-613]
Length = 303
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VNCA L+ CE+ P+ A +N + LS ++ L+ +STD V++G
Sbjct: 58 RPHYIVNCAGLTDAAACEDCPEEAYRVNALGA--RNLSVAARMGKSRLVQMSTDDVFDG- 114
Query: 136 KSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+S Y E D ++P VYGKSK+A E F+ E C+ I+RSS I+G SP ++
Sbjct: 115 RSLVPYTEFDPVSPRTVYGKSKMAGENFVREFCNRHIIVRSSWIFGDG--SPY-----LE 167
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSR 253
I + +G+ + D+ P + I+ L ED L +V G SR
Sbjct: 168 RILEMAGQGKTIRAASDQMASPTGADGLAAKIIELMEH--GEDG----LYHVTGQGCCSR 221
Query: 254 VQMAE 258
++A+
Sbjct: 222 YELAK 226
>gi|160935033|ref|ZP_02082419.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753]
gi|156866486|gb|EDO59858.1| dTDP-4-dehydrorhamnose reductase [Clostridium leptum DSM 753]
Length = 295
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G G LG L + ++E + + ++ H L + ++ D+D+
Sbjct: 3 VLVTGCKGQLGNELYKIITEKKSELGEIPQCFHDCKLTCIDVE---------DLDITDLE 53
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
A +P+VV+NCAA + CE+D D+A +N P +L + E L
Sbjct: 54 AVQAYTRTL-RPEVVINCAAYTNVNGCESDRDAAFRVNALGPRNL----AVACEETGAKL 108
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V+ G + Y E D P +VYG++K E+++ + CS + I+R++ +YG
Sbjct: 109 VHVSTDYVFPGDGTEPYVEWDLCGPQSVYGRTKYLGEQYVRDFCSRYFIVRTAWLYG 165
>gi|423251280|ref|ZP_17232293.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|423254604|ref|ZP_17235534.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|423305556|ref|ZP_17283555.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
gi|392650598|gb|EIY44265.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T00C08]
gi|392653170|gb|EIY46826.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis CL03T12C07]
gi|392680788|gb|EIY74152.1| dTDP-4-dehydrorhamnose reductase [Bacteroides uniformis CL03T00C23]
Length = 289
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV G G LG +++ + G D +VF D++ +
Sbjct: 3 ILVTGSNGQLGNEMVR----VSGNSKD--------------------RYVFTDIEELDIT 38
Query: 66 GFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
DA+ ++ Q DV+VNCAA + E+D +A IN + V +L++ ++ L
Sbjct: 39 NLDAILSLVRKEQIDVIVNCAAYTNVDKAEDDEKAADLINHVA--VGYLAAAAKSVNATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V+ G+ + EED P VYGK+K+A E+ + N+ ILR++ +Y
Sbjct: 97 IHISTDYVFRGINYVPFTEEDMTEPTGVYGKTKLAGEEAVVNSGCNYIILRTAWLYSAWG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
+ V L + +L D+ P + D+ I + +R +++ K +
Sbjct: 157 KNFVKTMLKLTEEKDILP------VIFDQIGTPTFAGDLADAIGWILDRRMTDKKGIYHF 210
Query: 243 LNVG 246
N G
Sbjct: 211 SNEG 214
>gi|333991657|ref|YP_004524271.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium sp.
JDM601]
gi|333487625|gb|AEF37017.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium sp.
JDM601]
Length = 289
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+++ G G LG+ L G + G+ DV A + D+
Sbjct: 5 QRIVITGARGQLGR-FLTGRAAEAGR--DVLALSSAQ------------------CDITD 43
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
DAV L+ G D++VNCAA + E DP+ A ++N L++ L
Sbjct: 44 PGAVDAVDLRAG--DLLVNCAAYTAVDAAETDPERAHAVNAAGP--GHLAAACARAGARL 99
Query: 124 IHLSTDQVYEG-----VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V++G Y+ D P++VYG +K+A EK + + ++R++ +Y
Sbjct: 100 IHISTDYVFDGDFGGAPPRPYEPGDPTRPLSVYGDTKLAGEKAVLAGSPDALVVRTAWVY 159
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
V S + + + E VE D+ P YV D+ +L L W
Sbjct: 160 ----TGAVGGSDFVAVMRARAEADETVEVVDDQIGSPTYVGDLADALLRLAEAW 209
>gi|291550330|emb|CBL26592.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14]
Length = 283
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG +PDV++NC ++ +CE +P+ A +N + LS ++ LST
Sbjct: 45 LNFGIVNRPDVIINCCGVTDTDLCEKEPEHAYRVNALGARN--LSIVARKNGAKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGQSKKPYTEFDDTNPLTVYGASKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ L V +G+ + D+ P +D+ ++IL L
Sbjct: 163 RVL------EVAEQGKTLSVAGDQFGSPTSAKDLARMILYL 197
>gi|389793148|ref|ZP_10196322.1| dTDP-4-dehydrorhamnose reductase [Rhodanobacter fulvus Jip2]
gi|388434881|gb|EIL91808.1| dTDP-4-dehydrorhamnose reductase [Rhodanobacter fulvus Jip2]
Length = 311
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L QPDV+VN AA + V + + A++ V V L + + L+IH STD V
Sbjct: 58 LDRAQPDVIVNAAAYTA--VDRAEQEEALATRVNGEAVGVLGQWAATHDALVIHYSTDYV 115
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G +S Y+ + AP+ YG+SK+A E+ + + ++ I R++ +Y + + L
Sbjct: 116 FDGRQSQPYEVDARTAPLGAYGRSKLAGERALRDSGADHLIFRTAWVYAAHGHNFLRTML 175
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ ++ E++ D+ P +V L +RWL+ D+ Q
Sbjct: 176 RLG------AEREELRVVADQHGAPTDTSLIVNGSLTALDRWLATDRNEQ 219
>gi|330991365|ref|ZP_08315316.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp.
SXCC-1]
gi|329761384|gb|EGG77877.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp.
SXCC-1]
Length = 270
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPS-SLVNWLSSFTENKENLLIHLSTDQVYEG 134
+PD+V+N AA + E +PD A N +L+ WL + + L+H+STD V+ G
Sbjct: 22 RPDLVINTAAWTAIDAAEEEPDRARLTNTEGPALLAWLCA---GQAVPLLHVSTDHVFSG 78
Query: 135 VKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ Y+E D P +VYG+S+ EK + C+ ++R+S +YGP
Sbjct: 79 TRGRPYRETDPTDPQSVYGRSRAEGEKAVLAACARAMVVRTSWVYGP 125
>gi|365886211|ref|ZP_09425164.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. STM
3809]
gi|365338302|emb|CCD97695.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. STM
3809]
Length = 300
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 35/234 (14%)
Query: 68 DAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DAV AL+ +PD V+N AA + V + +SA++ +V ++ + E IH
Sbjct: 45 DAVLAALRDFRPDFVINPAAYTA--VDRAEEESAVAYHVNRDGAKAVAEASACMEIPTIH 102
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G KS Y E+D AP++VYG SK+A E + ILR++ +Y P
Sbjct: 103 LSTDYVFDGTKSTPYAEDDATAPMSVYGASKLAGEHAVAAANHRHVILRTAWVYSP---- 158
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR-----WLSED 236
++ ++L E + D+ P Y D+ + ILA+ R W +E
Sbjct: 159 -----FGHNFVRTMLRLAETRDTLRVVCDQVGSPTYALDLAQAILAIAGRIDRSGWSTE- 212
Query: 237 KQMQLLLNVGGPDRVSRVQMA-EVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
+ ++ GPD V+ A ++ R + + ++ N++P+T D
Sbjct: 213 --FGGVTHIAGPDVVTWYDFACQIMR---------LAAARCARSANVEPITTSD 255
>gi|22298494|ref|NP_681741.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus
BP-1]
gi|22294674|dbj|BAC08503.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus
BP-1]
Length = 304
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 26/179 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K R+L++G TG +G L+Q + P +++ A + V D++
Sbjct: 7 KMRLLILGATGQVGWQLVQ----------------QAPPRVEVIPVARQGTAVTLDLE-- 48
Query: 63 SGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
DA++ LK +PDVV+N AA + E + + A IN S+ V L++
Sbjct: 49 ---DLDAISPLLKTLRPDVVINAAAYTAVDQAEQETERAQRIN--STAVGLLAATMAELG 103
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LLIH STD V+ G +S Y+E D AP+N YG +K E+ I ILR+S +Y
Sbjct: 104 GLLIHYSTDYVFAGNQSLPYRETDAPAPLNAYGYTKWLGEQAIARHHPAHLILRTSWVY 162
>gi|91776363|ref|YP_546119.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT]
gi|91710350|gb|ABE50278.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT]
Length = 306
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++P+ A +IN + + L+ LL+H STD V++G
Sbjct: 54 KPDLIINPAAYTAVDKAESEPELAYAINGTAPGI--LAEEAAKLNALLVHYSTDYVFDGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E DE P++VYG SK+A EK I E +N I R+S +YG K+ ++
Sbjct: 112 KTTPYTELDETNPLSVYGASKLAGEKAIQEVGANHLIFRTSWVYG-----AYGKNF-MRT 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + ++ + + D+ P + + + W + + L+N G
Sbjct: 166 ILRLAAERDSLNIVADQFGAPTSTESIADATITALHAWDGTQRGVYHLVNTG 217
>gi|218438467|ref|YP_002376796.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
gi|218171195|gb|ACK69928.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424]
Length = 294
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 31/226 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++G G +GQ L L+ I G VA +DL
Sbjct: 2 KKILLIGNNGQVGQELQSTLAPI-GDLTGVARDQ---------------------LDLTQ 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V ++ P+++VN AA + E++ + A ++N + + L+ + L
Sbjct: 40 PDNIRQV-IQDTHPEIIVNAAAYTAVDKAESETELAYTVNETAPKI--LAQECQKLGATL 96
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + EED+ P+ YG SK+A E+ I + C N+ ILR++ +YG
Sbjct: 97 IHISTDYVFDGTRGIPLTEEDKTNPIGAYGASKLAGEQAIQDNCQNYIILRTAWVYGTYG 156
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
K++ D E++ D+ P + +D+ I L
Sbjct: 157 KGNFVKTMLRLGADR-----EQLRVVADQIGTPTWAKDIADTITQL 197
>gi|407982689|ref|ZP_11163358.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium hassiacum DSM
44199]
gi|407375729|gb|EKF24676.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium hassiacum DSM
44199]
Length = 286
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 69 AVALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS 127
A A + +P DVV+NCAA + E DPD+A ++N V L+ + LIH+S
Sbjct: 38 AAAARHIRPGDVVINCAAYTQVDAAETDPDAAHAVNAVGPGV--LAQACARADARLIHIS 95
Query: 128 TDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV 186
TD V+ G K+ Y+ +D PV+VYG++K+A E + I+R++ +Y
Sbjct: 96 TDYVFSGTKTEPYEIDDSPGPVSVYGRTKLAGEAAVRAALPGAHIVRTAWVYRGG----- 150
Query: 187 PKSLPIQWIDSVLSKGE-KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
+ + L+ G+ VE D+ P YV D+V +L + ++ + + N
Sbjct: 151 -EGRDFVAVMQRLAAGDGTVEVVDDQVGSPTYVADLVTALLEVADKGPALAAPVLHAANA 209
Query: 246 GGPDRVSRVQMAEV 259
G VSR + A
Sbjct: 210 GA---VSRYEQARA 220
>gi|305665781|ref|YP_003862068.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170]
gi|88710545|gb|EAR02777.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170]
Length = 268
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-- 58
M KK +LV G +G LG+ L +IE + P+L SFVF D
Sbjct: 1 MKKKSILVTGASGQLGK----CLRKIE------------SDYPEL-------SFVFKDAS 37
Query: 59 -VDLKSGSG----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
+D+ + S FD+ D +NCAA + E +P A IN + +S
Sbjct: 38 QLDITNKSAVFKLFDSFNF-----DFCINCAAYTNVNEAEKNPKQAFRINEEGT--GNIS 90
Query: 114 SFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL 172
KE +L+H+STD V++G K Y ++D P+N YGKSK+A E+ I + + I+
Sbjct: 91 ELCRQKEVVLLHISTDYVFDGEKGTPYTKDDMPNPINEYGKSKLAGERQIQQTTRRYYII 150
Query: 173 RSSIIY---GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR-CPVYVRDVVKIILAL 228
R+S +Y G + + K L+K K+ DE + CP ++ ++ +
Sbjct: 151 RTSWLYSEFGKNFYTTILK----------LAKSNKILRVTDEQKGCPTNANNLAAYLMQI 200
>gi|402837885|ref|ZP_10886400.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium OBRC8]
gi|402274316|gb|EJU23500.1| dTDP-4-dehydrorhamnose reductase [Eubacteriaceae bacterium OBRC8]
Length = 286
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDV+ NCAA + CE D D+A IN + L+ E+ ++ L+H STD V+ G
Sbjct: 52 PDVIFNCAAHTNVDKCEEDIDNAYKINAIGAQN--LAMIAEHIDSKLVHFSTDYVFSGED 109
Query: 137 SFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ E + A P VYGKSK+ E+ + + CS + I+R++ +YG + V L +
Sbjct: 110 EIPRIESDFANPKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGDGN-NFVRTMLNLS-- 166
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALT 229
+ +K+ D+ P Y +D+ K L L+
Sbjct: 167 ----KQNDKLTVVGDQFGSPTYTKDLAKAALNLS 196
>gi|320586902|gb|EFW99565.1| NAD dependent epimerase dehydratase family protein [Grosmannia
clavigera kw1407]
Length = 322
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 139/319 (43%), Gaps = 54/319 (16%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +K VLV G +G LG+ +++ E + V T S + L+ V +
Sbjct: 3 MCRKSVLVTGASGLLGRQVVEVF---EQSNWAVTGTGFSRANGKTLIK------VNLENS 53
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ S D V +PDVVV+CAA P ENDP+ +N+ +S L+ ++
Sbjct: 54 TEVKSALDEV-----KPDVVVHCAANRFPDKVENDPEGTRRLNIEAS--RKLAQLCASRG 106
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIY-----------EKCS 167
LI++STD V+ G ++ Y+ E AP N+YG++K+ E+ + K
Sbjct: 107 ITLIYISTDYVFPGKPGEAPYEVEAAPAPTNLYGQTKLDGERAVLGVYNEAQQLEKTKKG 166
Query: 168 NFAILRSSIIYGPQTISPVPKSLPI--QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
+ ILR ++YG + P ++ + ++ V ++G V+ R P DV +++
Sbjct: 167 HAVILRVPVLYG-RVEKPAESAINVLMDIVNKVQAEGVTVKMDDWSIRYPTNTEDVARVL 225
Query: 226 LALTNRWLSE-DKQMQLLLNVGGPDRVSRVQMAE---------VDR-----------GVQ 264
+ ++ D + +L DR ++ ++ +DR +Q
Sbjct: 226 KDIATKYTEAVDADLPPVLQFSSEDRFTKYEICRLFAETLGVNIDRLLPDPTGGNTSSIQ 285
Query: 265 SPADISMDITKLVQTLNID 283
P D + TK ++ L ID
Sbjct: 286 RPYDCHLS-TKALKDLGID 303
>gi|54293741|ref|YP_126156.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens]
gi|53753573|emb|CAH15028.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens]
Length = 294
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 62/314 (19%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E H +P + +LD V
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSE---------HEVSPCTRDILDCFKLERV--------- 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L +PD+++N AA + E++PD A +N + V L ++ K LI
Sbjct: 44 ----QDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCRLVNYCSFKNIPLI 97
Query: 125 HLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 98 HLSTDYVFDGEKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGK 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--------------- 228
+ V L ++ S +++ D+ P RD+ +++ +
Sbjct: 158 NFVKTIL------NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKISHSSFDYWGLY 211
Query: 229 -------------TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITK 275
N +L+ K+ QLLL + ++ ++ E P + +D TK
Sbjct: 212 HYAGQGVTNWHEFANVFLNMAKEKQLLLTLTD---LNPIKSEEYPTRATRPKNSVLDTTK 268
Query: 276 LVQTLNIDPVTYKD 289
+ L I ++K+
Sbjct: 269 IETILGIKSCSWKN 282
>gi|229578479|ref|YP_002836877.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14]
gi|228009193|gb|ACP44955.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14]
Length = 274
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 55/297 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G +G LG L + L K Y+ + +DL +
Sbjct: 2 RILITGASGQLGFELSEVLKGDIVKVYNTKEVQGG-----------------YKLDLTNY 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +K +PDV++N A+L+ CE + A +N + V + + E LI
Sbjct: 45 SAVEDFIIK-KRPDVIINTASLTDVDKCEVERSLAFKVNAEA--VKHIVRASRVVEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G K YKEED P+N YG +K+ E + + I S +
Sbjct: 102 HISTDYVFDGKKGLYKEEDLPNPINYYGLTKLLGETYALSYDDSLVIRTSGVFR------ 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K PI ++ L +G++V F P+ R + + I L + + +LN
Sbjct: 156 --HKGFPI-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELI------EYRKTGILN 205
Query: 245 VGGPDRVSRVQMA--------------EVD--RG--VQSPADISMDITKLVQTLNID 283
V +RVSRV +A EVD +G + P D S+DI+K + L+ D
Sbjct: 206 V-ASERVSRVDLAMKIKEKFNLGGSVKEVDEVKGWIAKRPFDSSLDISKAKKLLSTD 261
>gi|347523230|ref|YP_004780800.1| dTDP-4-dehydrorhamnose reductase [Pyrolobus fumarii 1A]
gi|343460112|gb|AEM38548.1| dTDP-4-dehydrorhamnose reductase [Pyrolobus fumarii 1A]
Length = 295
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 18/208 (8%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
+ G +G LG H L GL +E K +D+ A + S P A + +DL
Sbjct: 1 MTGSSGLLG-HKLVGL--LEHKGFDIIALYRSKP------PATCSECIKLQLDLTEPERL 51
Query: 68 DAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLS 127
V + +PDVV + AA + CE + + A +N S++ +S ++++S
Sbjct: 52 VDVVQEH-KPDVVFHLAAFTNVDACEKEREMAWRVNTLSTIALVRASVRVGAR--IVYIS 108
Query: 128 TDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
TD V++G + Y+E+D +P+N YG +K+A E + +N ++R+S IYG P
Sbjct: 109 TDYVFDGRRGQYREDDAPSPINYYGLTKLAGETPVL--AANGVVVRTSGIYGS---GPGK 163
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCP 215
K+ PI I+ L +GE++ D+ P
Sbjct: 164 KTFPIVVIEK-LGRGEEIHAAIDQWYSP 190
>gi|160945704|ref|ZP_02092930.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii
M21/2]
gi|158443435|gb|EDP20440.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
M21/2]
gi|295103179|emb|CBL00723.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
SL3/3]
Length = 305
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG LL+ L E P+P+ LL+A ++D+ +
Sbjct: 2 KIIVTGCKGQLGTELLKQLQE---------GRSELGPIPEKLLNATVIPVDLPELDISNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PD+++NCAA + CE D A N P +L + E
Sbjct: 53 RMVDEF-VRRNRPDIIINCAAYTNVDGCEVHHDDAFKANALGPRNL----AQAAEKTGAR 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGIPQDEATLPGPISAYGSTKLMGEKYVERFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ IL L
Sbjct: 167 ----SYYGKNF-VKTIVNAGKKFGKLEVVNDQCGNPTNAADLAHEILQL 210
>gi|218258015|ref|ZP_03474457.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii
DSM 18315]
gi|423343005|ref|ZP_17320719.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
gi|218225814|gb|EEC98464.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii
DSM 18315]
gi|409216681|gb|EKN09664.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides johnsonii
CL02T12C29]
Length = 288
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 42/232 (18%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD--- 60
K +LV G G LG + Q +AA + PQ ++FVF DVD
Sbjct: 2 KTILVTGANGQLGNSIRQ-----------LAAGY-----PQ-------YAFVFTDVDTLD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ DA +K Q D ++NCAA + E+D A+ + V L
Sbjct: 39 ICDAQAVDAF-VKEKQADYIINCAAYTAVDKAEDD--EALCFRINRDAVRNLGEAARMAG 95
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH+STD V++G Y E D P +VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 96 ARVIHVSTDYVFDGTNHLPYVETDATCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLY- 154
Query: 180 PQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
++ ++L G E++ D+ P Y D+ ILA+
Sbjct: 155 --------SEFGNNFVKTMLRLGNEREQLSVVFDQIGSPTYAGDLAATILAV 198
>gi|421469687|ref|ZP_15918128.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
ATCC BAA-247]
gi|400229215|gb|EJO59074.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans
ATCC BAA-247]
Length = 319
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 18/234 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
++G +G LG+ ++ LS + +A + LL P DV
Sbjct: 1 MIGASGLLGRAVVASLSR-DPAFGTIATIRNRDTRGARLLALPPDKIAMLDV-------L 52
Query: 68 DAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 53 DRPALERAFDLHRPAAVVVCAAERRPDVCERDPAGARAINVDAP--ARIGALAARYGAWT 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP--- 180
+ +STD V++G + Y+E+ P+NVYG++K+ E + +LR ++YGP
Sbjct: 111 LGISTDYVFDGRAAPYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIAD 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ S V +P + S + E V R P Y DV +I L +R L+
Sbjct: 171 WSESAVTSLVP-AIVASARAGAEAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA 223
>gi|170756261|ref|YP_001782318.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str.
Okra]
gi|169121473|gb|ACA45309.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str.
Okra]
Length = 298
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
P++V+NCAA + CE++ + A +N S L+ E + LIH+STD V+EG
Sbjct: 65 PNIVINCAAYTNVDSCEDNYELAFKVN--SLGARNLAIACEKIKAKLIHISTDYVFEGNG 122
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++ YKE D PV+VYGKSK+ E+++ E CS + I+R+S +YG
Sbjct: 123 QAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYG 166
>gi|429507082|ref|YP_007188266.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488672|gb|AFZ92596.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 282
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LG+ L + L EG Y+V A L + +++ V +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRY------- 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +PD+VVN AA + CE + D A IN + L + EN I
Sbjct: 47 ------SFSHYKPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--ENTGAKFI 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +YG
Sbjct: 99 HISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGH 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + +V +D+ P Y +D+ + ++ L +R
Sbjct: 159 NFVNTMLKLA------DTHNQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|262275863|ref|ZP_06053672.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886]
gi|262219671|gb|EEY70987.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886]
Length = 326
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K QPDV++N AA + E +P++A ++N N L+ + +LIH+STD V
Sbjct: 47 VKAEQPDVIINAAAYTAVDKAETEPETAYAVN-DKGCEN-LALACKEHNVILIHVSTDFV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGPQTISPVPKS 189
++G S Y+ +D P+NVYG SK+A EK + E A I+R++ +Y + V
Sbjct: 105 FDGTNSTPYQTDDHPNPINVYGASKLAGEKKVAEILGAQATIIRTAWVYSVHGSNFVKTM 164
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
L ++++ E++ +D+ P + + + ++ +L + LSE K
Sbjct: 165 L------RLMAEKEQLNIVYDQIGTPTWAKGLATMMWSLVEKRLSEGK 206
>gi|429244148|ref|ZP_19207627.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum
CFSAN001628]
gi|428758814|gb|EKX81208.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum
CFSAN001628]
Length = 297
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
P++V+NCAA + CE++ + A +N S L+ E + LIH+STD V+EG
Sbjct: 64 PNIVINCAAYTNVDSCEDNYELAFKVN--SLGARNLAIACEKIKAKLIHISTDYVFEGNG 121
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++ YKE D PV+VYGKSK+ E+++ E CS + I+R+S +YG
Sbjct: 122 QAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYG 165
>gi|114566267|ref|YP_753421.1| carbohydrate oxidoreductase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337202|gb|ABI68050.1| carbohydrate oxidoreductase, putative [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 302
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
+ K RVL++GGTG LG L S++ +P DV AT S+ + A S + V
Sbjct: 12 LMKTRVLILGGTGMLGHTLF---SQLMLEPNLDVYATARSSEGLKEWFPADMVSKIRIGV 68
Query: 60 DLKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D FD V AL QPDVV+NC L +DP SA+++N S L + +S
Sbjct: 69 D---ADNFDTVIRALASIQPDVVINCIGLIKQLPISSDPLSAITVN--SLLPHRISLVCR 123
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LIH+STD V+ G K Y E+D ++YG+SK E Y C +R+SII
Sbjct: 124 TAGARLIHISTDCVFNGSKGNYTEQDPSDAQDLYGRSKFLGE-VSYPHC---VTIRTSII 179
>gi|428775036|ref|YP_007166823.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
gi|428689315|gb|AFZ42609.1| dTDP-4-dehydrorhamnose reductase [Halothece sp. PCC 7418]
Length = 294
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP+V++N A + E++ A ++N + V L+ E L+H+STD V++G
Sbjct: 51 QPNVIINAGAYTAVDKAESEESLAYAVNGNAPTV--LAESAEQIGARLLHISTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D+ P+ VYG+SK+ E+ I + SN+ ILR++ +YG +
Sbjct: 109 KHKPYTETDDPNPLGVYGQSKLVGERGIQQHSSNYIILRTAWVYGAYGSG--------NF 160
Query: 195 IDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILAL 228
+ ++L GE+ E + D+ P + D+ K I+ L
Sbjct: 161 VKTMLRLGEEREELNVVSDQVGTPTWSNDIAKAIVGL 197
>gi|91794012|ref|YP_563663.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217]
gi|91716014|gb|ABE55940.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217]
Length = 291
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 36/248 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G L++ L T L L LD +D+
Sbjct: 2 RILITGKNGQVGSCLVELLDA-------------ETDLTFLALDRE-------QLDITDA 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN- 121
+ V +F +PD+++N AA + E + + A +IN P +L + N N
Sbjct: 42 NEVSKVVAEF-KPDIIINAAAYTAVDRAEKECELAYAINRDGPYNL-----ALAANDVNA 95
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+IHLSTD V+ G S Y E D+ P + YG+SK+A E+ + CS ILR++ ++G
Sbjct: 96 LIIHLSTDYVFSGNSSESYVESDKTGPQSEYGRSKLAGEQAVVLACSRHIILRTAWVFGE 155
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+ V L + + ++ D+ P Y D+ K ILA++N+ + ++
Sbjct: 156 HGNNFVKTMLRLA------KTRDTLDVVADQFGGPTYAGDIAKAILAISNQVMKGNQAYG 209
Query: 241 LLLNVGGP 248
+ G P
Sbjct: 210 VYHYSGFP 217
>gi|364284985|gb|AEW47973.1| GHF1 protein [uncultured bacterium H2_7]
Length = 319
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 136/314 (43%), Gaps = 56/314 (17%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---V 59
+K VLV G G LG + S + LP F F D +
Sbjct: 29 QKNVLVTGAYGQLGSEIKALTSRMN----------------------LPFRFFFTDADTL 66
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D+ + DA + + ++NCAA + E D + A +INV + V ++
Sbjct: 67 DITDINQIDAFVSDY-KIQYLINCAAYTAVERAETDVEKAAAINVTA--VTHIAQVAVKY 123
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+IH+STD V++G S YKE P++VYGK+K+A E+ + ++ ILR+S +Y
Sbjct: 124 GVKVIHISTDFVFDGTSSVPYKETMAAQPLSVYGKTKLAGEEALQAAGGDWIILRTSWLY 183
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL---------- 228
+ V K + + + + E++ D+ P Y D+ ++++ +
Sbjct: 184 SAYGNNFVKKMIRL------MHERERLTVVDDQWGSPTYAADLAEMVIHILQFTEEQEWK 237
Query: 229 ------TNR----WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQ 278
+N+ W + +Q L+ + + +S +Q E + P+ MD++K
Sbjct: 238 TGIYHFSNKGETTWFRFAQAIQKLVGITSCELIS-IQSHEYPSAARRPSYSVMDLSKTTS 296
Query: 279 TLNIDPVTYKDGVK 292
+ +++ +++ ++
Sbjct: 297 SFHVEIPAWEEALQ 310
>gi|218780350|ref|YP_002431668.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans
AK-01]
gi|218761734|gb|ACL04200.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans
AK-01]
Length = 292
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++L+ G G LG ++ L TH H F +D
Sbjct: 1 MENLKILITGNQGLLGTECVRVLY----------PTHEI------------HGFSSNILD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTEN 118
++ S + +K +PD+VVNCAA + CE A +N P +L + +
Sbjct: 39 IRDKSQVEG-RIKEIRPDIVVNCAAYTKVDSCETHFQDAWDVNAIGPENLARAVRKYG-- 95
Query: 119 KENLLIHLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
L+H+STD V++GV+S Y E+D P++ YGKSK+A E+ + C AI+R++
Sbjct: 96 --GFLVHISTDYVFDGVRSIPHPYTEDDSPNPLSAYGKSKLAGEEAVRSLCPLHAIVRTA 153
Query: 176 IIYG 179
+YG
Sbjct: 154 WLYG 157
>gi|115360828|ref|YP_777965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD]
gi|115286156|gb|ABI91631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD]
Length = 317
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+S +L++G +G LG+ + LS E VA + L P + DV
Sbjct: 4 VSHPTILLIGASGLLGRAVAASLSR-ESSLTQVATIRNPDTAGARRLALPPDNVARLDV- 61
Query: 61 LKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ +P V+ CAA P VCE DP +A +INV + + +
Sbjct: 62 ------LDQPALEQLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPAR--IGALA 113
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 114 ARYGAWTLGISTDYVFDGKDAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPL 173
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YGP S V +P + S + V R P Y DV ++I LT R L
Sbjct: 174 LYGPIVDWRESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHL 232
Query: 234 S 234
+
Sbjct: 233 A 233
>gi|67920275|ref|ZP_00513795.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH
8501]
gi|67857759|gb|EAM52998.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH
8501]
Length = 168
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 24/181 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++LV G +G+LG +L Q E + V ++++ L D+ +FV DV
Sbjct: 2 KKLLVTGASGFLGYNLCQYAQE----NWQVYGSYYNHKL-----DSKNINFVKVDV---- 48
Query: 64 GSGFDAVALKFGQ--PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ D + F Q PD V++ AA S P C+N+P+ + INV +S ++ +
Sbjct: 49 -TNIDELQTIFKQIKPDAVIHLAAASKPNYCQNNPEDSYKINVTAS--GNIAKLCADVNI 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK---FIYEKCSNFAILRSSIIY 178
+ STD V++G+ YKE D ++P++ YG+ KV AE+ IY K I R +++
Sbjct: 106 PCVFTSTDLVFDGLNPAYKESDPVSPISYYGEQKVKAEQEMLIIYPKT---VICRMPLMF 162
Query: 179 G 179
G
Sbjct: 163 G 163
>gi|384267318|ref|YP_005423025.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900437|ref|YP_006330733.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens Y2]
gi|380500671|emb|CCG51709.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387174547|gb|AFJ64008.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens Y2]
Length = 282
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 41/233 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L EG Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAAGQLGRELCRQLKR-EG--YEVIA------LTKAMMNISDQRSVRHSFSHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+PD+VVN AA + CE + D A IN + L + N
Sbjct: 52 ----------------KPDIVVNTAAYTSVDKCETELDKAYLINGIGAYYAALEA--GNT 93
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V+ G + Y+ +D P +YGKSK E+ I N I+R+S +Y
Sbjct: 94 GAKFIHISTDYVFSGKGTRPYQTDDPADPGTIYGKSKKLGEELIRLTGKNHTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
G + V L + +V +D+ P Y +D+ + ++ L +R
Sbjct: 154 GSGGHNFVNTMLKLA------DTHNQVRVVNDQVGAPTYTKDLAETVIGLFDR 200
>gi|293602505|ref|ZP_06684951.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC
43553]
gi|292819267|gb|EFF78302.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC
43553]
Length = 298
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 26/175 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +GQ L + L PL +++ + DVDL
Sbjct: 2 KILLLGKDGQVGQELQRTL----------------LPLGEVI------ALGRHDVDLTDL 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A L+ +PD +VN AA + EN+ D A IN + V+ L+ ++ LLI
Sbjct: 40 DALHAT-LRVHRPDTIVNAAAYTAVDKAENEKDLAAQINCRA--VSALAQYSNEHNALLI 96
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V++G K+ Y E D + P +VYG +K+A EK I + + R+S ++
Sbjct: 97 HYSTDYVFDGAAKNPYSETDPVGPQSVYGATKLAGEKAIIDSGCKALVFRTSWVF 151
>gi|153853088|ref|ZP_01994497.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814]
gi|149753874|gb|EDM63805.1| dTDP-4-dehydrorhamnose reductase [Dorea longicatena DSM 13814]
Length = 282
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L FG +PDV++NCAA++ +CE +P+ A +N + LS ++ +ST
Sbjct: 45 LNFGVINRPDVIINCAAVTDTDLCEKEPELAYRVNALGA--RNLSIVARKTGAKMVQIST 102
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G++ Y E D+ P VYG+SK A E ++ E ILRS+ +YG
Sbjct: 103 DDVFDGIRHTPYTEFDDTNPKTVYGRSKRAGENYVKEFTHKHFILRSNWVYGNGN----- 157
Query: 188 KSLPIQWIDSVLSKGE-KVEFF--HDECRCPVYVRDVVKIILAL 228
+++ VL + K E D+ P +D+ +IIL L
Sbjct: 158 -----NFVNRVLHAADTKDELLIASDQFGSPTSAKDLARIILYL 196
>gi|291242991|ref|XP_002741389.1| PREDICTED: methionine adenosyltransferase II, beta-like
[Saccoglossus kowalevskii]
Length = 298
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 140/314 (44%), Gaps = 41/314 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KRVL+ G +G LG+ +L+ + + +A + + L + VD+
Sbjct: 2 KRVLITGASGLLGRPVLKEFTNASWEVLGLAFSRATGSLKK--------------VDITD 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V +F +P VVV+ AA P + E + +NV ++ + ++ +
Sbjct: 48 EEQVRNVMKEF-KPSVVVHSAAERRPDIVEKQEEVTKKLNVDTTAM--IARLCGEFGAFM 104
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G + Y+ + + P+N YG+SK+ EK + + AILR I+YG +
Sbjct: 105 LYISTDYVFDGKNAPYQVDAQPNPLNKYGRSKLDGEKATSDNLTESAILRIPILYG--EV 162
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ +S +V + + R P +V D+ II L + L +D ++ +
Sbjct: 163 EKLSESAVTILFQAVQDTNKPATMCDYQKRYPTHVNDIAVIIRKLAEKRL-QDPSIKGIF 221
Query: 244 NVGGPDRVSRVQMA------------------EVDRGVQSPADISMDITKLVQTLNI--D 283
+ + +++ MA E +G P D+ +D T+L Q++ I +
Sbjct: 222 HYSSNELMTKYSMAMTMAEIFNIPSQHIVADKEPSKGTPRPYDVHLDSTRL-QSIGITTE 280
Query: 284 PVTYKDGVKLTLAA 297
+K+G++ L +
Sbjct: 281 QTPFKEGIQKCLKS 294
>gi|107028498|ref|YP_625593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054]
gi|116686494|ref|YP_839741.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424]
gi|105897662|gb|ABF80620.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054]
gi|116652209|gb|ABK12848.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424]
Length = 321
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 12/236 (5%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+ VL++G +G LG+ + L+ E +A + LL P + ++DL
Sbjct: 10 RSTVLLIGASGLLGRAVAACLAR-ESSLTLLATIRNPQSAGAKLLALPPENIA--ELDLL 66
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + +P V+ CAA P VCE DPD+A +INV + + +
Sbjct: 67 DQPSLERI-FETHRPAAVILCAAERRPDVCERDPDAARAINV--TAPARIGALATRYGAW 123
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +++GP
Sbjct: 124 TLGISTDYVFDGKAAPYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGP-- 181
Query: 183 ISPVPKSLPIQWIDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
I+ +S + +V++ + V R P Y DV ++I LT R L+
Sbjct: 182 IADWSESAVTSLVPAVVASSRPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLA 237
>gi|398926497|ref|ZP_10662493.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM48]
gi|398170764|gb|EJM58692.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM48]
Length = 289
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAVAPGI--LAEEARALDIPLIHYSTDYVFDGM 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D P+ VYGKSK+A E+ I + ILR+S +Y + + L +Q
Sbjct: 108 KAGPYTEDDAPNPLGVYGKSKLAGEQAIRDIQGKHLILRTSWVYSTHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+L + ++ D+ P + + LAL RW + +
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTIANSTLALIERWQANE 203
>gi|118580513|ref|YP_901763.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379]
gi|118503223|gb|ABK99705.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379]
Length = 280
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV+G G LG L+ L E G+ DV D+D+ S
Sbjct: 2 ILVIGCNGMLGSDLMT-LLEGRGRGVDVR-----------------------DLDITSLE 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ + +P VV+NCAA + CE++ ++AM +N V L+ T L+
Sbjct: 38 STERLLTSL-KPSVVINCAAYTDVDGCESNRETAMLVNAEG--VANLARVTRGIGARLVQ 94
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G K S Y E+D+ AP++VYG+SK+ E+ + I+R+ +YG Q +
Sbjct: 95 ISTDYVFDGAKGSPYLEDDQTAPLSVYGQSKLLGERNAATN-PDHLIVRTQWLYGLQGNN 153
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
V L + ++ E + D+ P + D+ + ILAL R
Sbjct: 154 FVETMLRLG------TERECLTVVDDQIGSPTWTVDLSRAILALLAR 194
>gi|209526054|ref|ZP_03274587.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
gi|209493580|gb|EDZ93902.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328]
Length = 292
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 QPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG 214
>gi|169831836|ref|YP_001717818.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638680|gb|ACA60186.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis
audaxviator MP104C]
Length = 285
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLST 128
AL+ +PD VVNCAA + E + A ++N P +L + E +LL H+ST
Sbjct: 46 ALREYRPDAVVNCAAYTDVDGAETARERAFAVNGLGPRNLA---LACRETGVDLL-HIST 101
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D +++G K Y D+ PVNVYG SK+ E+ I S F I+R S ++ P + V
Sbjct: 102 DYIFDGRKDGPYGVYDDPCPVNVYGASKLWGERAIASLASRFYIVRVSWLFAPWGKNFVA 161
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL-----------TNR----W 232
L + + E + D+ CP Y D+ +++L L TN+ W
Sbjct: 162 TMLRLG------RERESLRVVDDQYGCPTYAPDLARLLLDLIATRCYGVYHATNQGVTSW 215
Query: 233 LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVK 292
+ ++ G P RV AE R + PA+ +D L +T+ ++D ++
Sbjct: 216 CGFAR--AIMKQAGLPARVEPCTSAEFPRPARRPANSVLDPFPLRETVGYLLPPWEDALE 273
Query: 293 LTL 295
L
Sbjct: 274 RCL 276
>gi|448239582|ref|YP_007403640.1| putative dTDP-4-dehydrorhamnose reductase [Geobacillus sp. GHH01]
gi|445208424|gb|AGE23889.1| putative dTDP-4-dehydrorhamnose reductase [Geobacillus sp. GHH01]
Length = 280
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
P VV++ AA + + E++PD A +IN + + +E L+++STD V++G
Sbjct: 51 NPSVVIHAAAYTKVDLAESEPDQAFAINAYGT--RNVVVVSEKVGAKLVYVSTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E P++VYGKSK+A E+F+ + S F I+R+S +YG + V L +
Sbjct: 109 ANVPYHEFAPTNPLSVYGKSKLAGEQFVRDLHSKFFIVRTSWVYGKHGNNFVKTMLKLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ +++ HD+ CP Y D+ IL L
Sbjct: 168 -----QERDELMVVHDQIGCPTYTVDLANCILEL 196
>gi|323135558|ref|ZP_08070641.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242]
gi|322398649|gb|EFY01168.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242]
Length = 299
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 45/236 (19%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVYEG 134
D +VN AA + E++PD AM +N + + E L L+HLSTD V++G
Sbjct: 57 DAIVNAAAYTAVDKAESEPDVAMRVNGEGA-----GNVAEAAAELGVPLLHLSTDYVFDG 111
Query: 135 VKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+ Y+E+D P YG+SK+A E+ I N AILR++ +Y P
Sbjct: 112 ARDRPYREDDPTGPTGAYGRSKLAGEEKIAAIHPNHAILRTAWVYSP---------FGAN 162
Query: 194 WIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGG-- 247
++ ++L G E+V D+ P D+ ++ + R ++ +++ + ++ G
Sbjct: 163 FVKTMLRLGETREEVGVVADQLGNPTNAIDIADALIVIARRLAADPSPELRGVFHMTGQG 222
Query: 248 ---------------------PDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
P RV R+ A+ + PA+ +D TKL + +
Sbjct: 223 EATWADFAESTFAIAERFGRKPVRVKRITTADYPTPARRPANSRLDNTKLNERFGV 278
>gi|418298200|ref|ZP_12910039.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355536795|gb|EHH06062.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 297
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ +PD VV+ AA + E++PD A ++N + ++ + +IHLSTD
Sbjct: 45 ALREVKPDAVVSAAAYTAVDKAESEPDIAFAVNRDGARA--VAQAASDIGIPVIHLSTDY 102
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K + Y E D P ++YG+SK+ E+ + E N+A+LR++ +Y + V
Sbjct: 103 VFDGTKATAYVESDPTGPTSIYGRSKLEGEQAVSEATGNYAVLRTAWVYSEYGNNFVKTM 162
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
L + +++ D+ CP D+ I+A+ R L +D +L
Sbjct: 163 LRLS------ENRDEINVVADQFGCPTSANDIATAIVAIA-RKLVDDSSPRL 207
>gi|187476638|ref|YP_784661.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N]
gi|115421224|emb|CAJ47729.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N]
Length = 291
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 31/188 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLL-LDALPHSFVFFDV-DLK 62
++L++G G +G+ L + L+ PL +LL L P D+ DL
Sbjct: 2 KILLLGKDGQVGRTLCRALA----------------PLGELLALGRRPQPQGHVDLSDLA 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S S ++ PDV+VN AA + E +PD A IN + + L+ ++
Sbjct: 46 SLSRL----VREVNPDVIVNAAAFTAVDQAEREPDLAFRINAEAPEI--LARAMRERQGW 99
Query: 123 LIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-- 179
L+H S++ VY+G S ++ ED AP+NVYG SK A ++ I ++ +LR+S +YG
Sbjct: 100 LVHYSSEYVYDGSGSEFRTEDSPTAPLNVYGLSKRAGDEAICRSGAHHLLLRTSWVYGSR 159
Query: 180 ----PQTI 183
PQT+
Sbjct: 160 GEGFPQTV 167
>gi|323701365|ref|ZP_08113039.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM
574]
gi|333923093|ref|YP_004496673.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533624|gb|EGB23489.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM
574]
gi|333748654|gb|AEF93761.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 284
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Query: 75 GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG 134
GQPD+V+NCAA + E D + AM IN V L+ E L+ +STD V+ G
Sbjct: 50 GQPDIVINCAAYTAVDQAEQDRERAMQIN--GLGVGNLALVCGELEIPLVQISTDYVFSG 107
Query: 135 VK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
K Y D+ P+N YG SK+A EK++ + F ++R+S ++G + + ++
Sbjct: 108 QKPGAYTVFDQPQPINAYGWSKLAGEKYVLQLLQRFYLVRTSWLFG------LYGNNFVE 161
Query: 194 WIDSVLSKGEKVEFFHDECRCPVYVRDVVKII--LALTNRW 232
I + + +++ D+ CP + +D+ + + L T R+
Sbjct: 162 TILRLAQERKELTVVDDQHGCPTWTQDLARAVADLIATGRY 202
>gi|422321838|ref|ZP_16402883.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54]
gi|317403268|gb|EFV83786.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54]
Length = 304
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + + D AM IN ++ LS+ + L++H S+D V++G
Sbjct: 52 KPDVIVNAAAFTAVERAQEDGVRAMRINAEAA--GELSALAAERGALIVHYSSDYVFDGA 109
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D AP+NVYG+SK+A E+ + + R+S +YG V + ++
Sbjct: 110 KPGAYDERDTPAPLNVYGRSKLAGEQAVRAMNPAHLVFRTSWVYG------VFGNSFLKT 163
Query: 195 IDSVLSKGEKVEFFHDECRCP---VYVRDVVKIILALTNRWLSE 235
+ L + E + D+ P Y+ D ++LA R+L+
Sbjct: 164 MLMALRQPETLRVVSDQRGAPTGAAYIADATALVLA---RYLAR 204
>gi|237745880|ref|ZP_04576360.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS]
gi|229377231|gb|EEO27322.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS]
Length = 279
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 46 LLDALPHSFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSIN 103
L + L S V+ D + S AV LK D ++NCAA + E++P A ++N
Sbjct: 15 LRNLLGASAVYIDRETLDISDEAAVRNYLKNNCFDCIINCAAYTAVDRAEDEPVQANAVN 74
Query: 104 VPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFI 162
SL WL+ + + +IH+STD V++G Y EED+ P+++YGK+K+A EK +
Sbjct: 75 HLGSL--WLAKYGKR----IIHISTDYVFDGTSHVPYHEEDKTNPLSIYGKTKLAGEKAV 128
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVR 219
+ +LR++ +Y P ++ ++L G E + D+ P
Sbjct: 129 LDYAETAVVLRTAWVYSP---------YGNNFVKNILRMGRTRESLRVVSDQIGSPTSAG 179
Query: 220 DVVKIILALTNRWLSEDKQMQLLLNVG 246
D+ K I+ + + + K + N G
Sbjct: 180 DLAKSIIEILQQMKTGKKDVYHFTNEG 206
>gi|147921183|ref|YP_685006.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
gi|110620402|emb|CAJ35680.1| dTDP-4-dehydrorhamnose reductase [Methanocella arvoryzae MRE50]
Length = 264
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 14/156 (8%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ PD V+N AA + CE++ + A +IN +L+ + L+H STD
Sbjct: 46 AIRKAAPDAVINAAAYTNVDGCEDEQEKAYAINGLGPA--YLAEACKEVGATLVHYSTDY 103
Query: 131 VYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
V++G + Y+E D P++VYGKSK+A EK + ++ I+R+S ++G +
Sbjct: 104 VFDGSRPEYRESDATNPISVYGKSKLAGEKNVQYNMDDYRIVRTSWLFGRHGKN------ 157
Query: 191 PIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVK 223
++D++LS ++ V+ +D+ P Y D+ +
Sbjct: 158 ---FVDTILSLSKQMPTVKVVNDQVGKPTYTVDLAE 190
>gi|332294914|ref|YP_004436837.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM
14796]
gi|332178017|gb|AEE13706.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM
14796]
Length = 277
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLST 128
A+K PDVV+NCAA ++ E++ ++A +N P +L + F +L+H ST
Sbjct: 46 AIKKSMPDVVLNCAAYNLVDKAESNWEAAYRVNALGPRNLAVLSNEFNY----ILVHFST 101
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++GVKS Y DE P++VYG+SK++ E+ I CS + ++R+S ++G P
Sbjct: 102 DYVFDGVKSKPYLIYDEPNPISVYGRSKLSGEREISSLCSKYYVIRTSWVFGDG-----P 156
Query: 188 KSLPIQWIDSVLSKG-EKVEFFHDECRCPVYVR 219
S P + I+ SKG + ++ D+ P R
Sbjct: 157 NSFPRKLIE--WSKGKDNLKVVCDQFSSPTSAR 187
>gi|427784833|gb|JAA57868.1| Putative methionine adenosyltransferase 2 subunit beta
[Rhipicephalus pulchellus]
Length = 350
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VL+ G +G LG+ L++ + ++V HS LL VDL
Sbjct: 48 KTVLITGASGLLGRSLVKAF---QAASWNVTGLAHSRASGDLL-----------SVDLTD 93
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + +K +P+V+V+ AA P E D D++ ++NV +S L++ ++
Sbjct: 94 HQQTEKI-VKERKPNVIVHSAAQRFPDKVEKDYDASYALNVTAS--KDLAALADSVGAAF 150
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY-GPQT 182
I +STD V++G Y E + P+N YG +K AEK + + +LR ++Y G +
Sbjct: 151 IFISTDYVFDGRNPPYSENAKPNPLNKYGTTKAEAEKAVLTVKPDSIVLRVPVLYGGEEY 210
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
S S+ Q ++ + + V+ E R P + D+ I++ L R L E
Sbjct: 211 ASESAVSVLCQLLN---DRSKHVKASDYEIRYPSHTEDIAYIVVQLAERRLQE 260
>gi|291547964|emb|CBL21072.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5]
Length = 283
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG +PDV++NC ++ CE +P+ A +N + LS ++ LST
Sbjct: 45 INFGSINRPDVIINCTGITDTDECEKNPEHAYRVNALGARN--LSIVARKCGAKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG+SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGKSKKPYTEFDDTNPLTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ L KG+ + D+ P +D+ ++IL L
Sbjct: 163 RVL------ETAEKGQALSVASDQFGSPTSAKDLARMILYL 197
>gi|383639064|ref|ZP_09951470.1| DTDP-4-dehydrorhamnose reductase [Streptomyces chartreusis NRRL
12338]
Length = 307
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R LVVG +G++G L L+ + D A TP P D + H++V D+
Sbjct: 2 RTLVVG-SGFVGSALAGRLA----RAGDEAVLASRTP-PASPADGVVHAWVPLDITEDGA 55
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G AL+ + D VV S CE P+ A + ++ + N+ ++
Sbjct: 56 FGR---ALERVRADTVVLVHGPSDVTWCEEHPEEATHGHAEAA--RQVVRAAGNRR--VV 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG--PQT 182
+STD V++ E P N YG++K+AAE+ + E +LR S+IYG P T
Sbjct: 109 FISTDNVFDADAGAPDESVPPRPANAYGRAKLAAEQILAE-LPAVTLLRVSLIYGWEPAT 167
Query: 183 ISPVPKSLPIQWID------SVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+ +W++ L GE+V D+ PV + DVV++ A L+
Sbjct: 168 ST--------KWLNFFASCVHRLRAGERVTAPFDQWTTPVLLDDVVEVTTA-----LARA 214
Query: 237 KQMQLLLNVGGPDRVSRVQMA 257
+ LL++GGPDR+SR + A
Sbjct: 215 ESPPRLLHLGGPDRLSRAEWA 235
>gi|440228478|ref|YP_007335569.1| dTDP-4-dehydrorhamnose reductase [Rhizobium tropici CIAT 899]
gi|440039989|gb|AGB73023.1| dTDP-4-dehydrorhamnose reductase [Rhizobium tropici CIAT 899]
Length = 300
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLS 127
AL +P ++VN AA + E+D + AM++N P L W + + LLIH S
Sbjct: 45 AALDEHKPGIIVNPAAYTAVDRAESDNELAMAVNATAPGILARWAA----DNGALLIHYS 100
Query: 128 TDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
TD V++G K+ Y+EED + P +VYG+SK E+ + ++ AILR+S +YG
Sbjct: 101 TDYVFDGTKADPYQEEDVVNPQSVYGESKWRGEEAVRASGAHHAILRTSWVYG 153
>gi|398921271|ref|ZP_10659741.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM49]
gi|398166195|gb|EJM54298.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM49]
Length = 289
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAVAPGI--LAEEALALDIPLIHYSTDYVFDGM 107
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y E+D P+ YGKSK+A E+ I + + ILR+S +Y + + L +Q
Sbjct: 108 KASPYNEDDTPNPLGAYGKSKLAGEQAIRDVQGKYLILRTSWVYSTHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+L + ++ D+ P + + LAL RW + +
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTIANSTLALIERWQTNE 203
>gi|85819127|gb|EAQ40286.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134]
Length = 291
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG G + Q ++E E +V + H S ++D+ S
Sbjct: 9 RLLITGG----GGQVAQAINEEEATFENVTSIHLSKS----------------ELDITST 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S A+ QPDV++N AA + E D + A +N V L+ ++ LI
Sbjct: 49 SSIKK-AIDLHQPDVIINTAAYTAVDAAEEDKEKAFLVNEIG--VKNLAQACKDNGIKLI 105
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEK-FIYEKCSNFAILRSSIIYGPQT 182
H+STD V++G K Y EED P VYGKSK+A E+ I ++AI+R+S +Y
Sbjct: 106 HISTDYVFDGEKPEEYTEEDIPNPTTVYGKSKLAGEQAIINSGLLDYAIIRTSWVYSVYG 165
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V L + + +++ +D+ P ++ +IL L+N
Sbjct: 166 SNFVKTMLRLGNVK------DEISVVNDQYGSPTLANNLASVILQLSN 207
>gi|189500819|ref|YP_001960289.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1]
gi|189496260|gb|ACE04808.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1]
Length = 286
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 34/233 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LV GG G LG L + +AA H +F F+D+ L +
Sbjct: 3 ILVTGGNGQLGSELKE-----------LAARHEGM------------TFFFYDLPLLDIT 39
Query: 66 GFDAVALKFGQP--DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
V G+ D +VNCAA + E++P++A +N V L+ + + LL
Sbjct: 40 DRAMVHRVCGEHAVDAIVNCAAYTAVDRAEDEPEAAYRVNRDGPEV--LAEAAKERHALL 97
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H+STD V+ G Y E D ++P+ VYG+SK E+ I ++ I+R+S +Y
Sbjct: 98 VHVSTDYVFNGESCTPYHEGDAVSPLGVYGQSKWEGEEKIRAIAPSYMIVRTSWLYSSHG 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+ V L + S+ ++++ D+ P D+ + ++++ +R+ E
Sbjct: 158 RNFVKTMLRLG------SERDELKVVFDQAGTPTLAADLAEALVSMLSRYDRE 204
>gi|253996730|ref|YP_003048794.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8]
gi|253983409|gb|ACT48267.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8]
Length = 319
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPD+++N AA + E++PD A +IN + V L+ IH STD VY G
Sbjct: 72 QPDLIINPAAYTAVDKAESEPDLAYAINATAPGV--LAEEAAKLGAKFIHFSTDYVYAGN 129
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E+D AP+++YGKSK+A E+ + I R+S +YG K+ +
Sbjct: 130 KIGVYVEDDATAPLSIYGKSKLAGEEAVRAVGLPSLIFRTSWVYGAYG-----KNF-LHT 183
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + + E++ D+ P + + ++ + RW E + L+N G
Sbjct: 184 ILRLAKEREQLRIVADQIGAPTSSHSIAQAVVEVLARWDGEHSGVYHLVNAG 235
>gi|326391870|ref|ZP_08213382.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW
200]
gi|325992088|gb|EGD50568.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW
200]
Length = 298
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PDV++NCAA + CE+D D+A +N P +L L+H+STD V+
Sbjct: 63 RPDVIINCAAYTNVDKCESDIDTAFKVNAIGPRNLAIAAQKIGAR----LLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G ++E D P+NVYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGDIPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + KG +E +D+ P D+ IL L
Sbjct: 174 TILKAAKEKG-YLEVVNDQKGNPTNAEDLAHHILKL 208
>gi|419547288|ref|ZP_14086021.1| dTDP-4-dehydrorhamnose reductase [Campylobacter coli 2680]
gi|380520918|gb|EIA46681.1| dTDP-4-dehydrorhamnose reductase [Campylobacter coli 2680]
Length = 293
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 55/293 (18%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---VD 60
K + ++G G LG+ + S E K ++ FFD ++
Sbjct: 3 KNIAILGSNGQLGKTFRELFSLFEKK----------------------YNVYFFDKTQLN 40
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
++ + + K+ + D ++NCAA + + E + + A +N S V ++ +
Sbjct: 41 IQDKNLLEYFIDKY-KFDYIINCAAYTDVNLAEVEQEKAYILNHNS--VKNIADLAKKYN 97
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSII 177
IH+STD V++G KS+ YKE+D+ P+N+YG+SK+ E+ I + K N ILR+S +
Sbjct: 98 LTFIHISTDYVFDG-KSYIPYKEDDKTKPLNIYGESKLRGERAIIDIKPKNTIILRTSWL 156
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
Y K + I ++ K ++++ D+ P Y RD+ ++I+ + +E
Sbjct: 157 YSNY------KGNFVHTIRNLGKKRDEIDVVFDQIGTPTYARDLAEVIVNILPAIQNEKP 210
Query: 238 QMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQ-TLNIDPVTYKD 289
++ N GV S D + +I KL Q NI P+ KD
Sbjct: 211 EIYHYSN----------------EGVASWYDFAKEIMKLSQLDCNIKPIESKD 247
>gi|159904976|ref|YP_001548638.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6]
gi|159886469|gb|ABX01406.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6]
Length = 285
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD VVN AA++ +CE + + A N + L ++ + + L H+STD V++GVK
Sbjct: 65 PDFVVNTAAMTNVDLCEKEKELAYKSN--ALLAEYIGKVCKKTGSKLCHISTDYVFDGVK 122
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E D I P+N YG +K E+ + E N +I+R S YG SPV + W+
Sbjct: 123 GNYVETDPINPINYYGFTKAEGERLLNEIDYDNKSIVRISTPYG---FSPVKLNF-YTWV 178
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
L + + D+ + D+ + +L + N LS +++ GG +++SR +
Sbjct: 179 LESLKCEKPINIVTDQYTTSTNLLDLSEFMLKIQNDDLSG------IIHFGGSEKLSRYE 232
Query: 256 MA 257
A
Sbjct: 233 FA 234
>gi|260893428|ref|YP_003239525.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4]
gi|260865569|gb|ACX52675.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4]
Length = 278
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G LG+ +++ E+E + +DV L + LD V
Sbjct: 2 RVLVTGAAGRLGRAMVK---ELEERGFDVIG------LARQQLDITSRKAV--------- 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A L+ +P VVVNCAA + E DP A +N V +L+S E L+
Sbjct: 44 ----AEVLREYRPRVVVNCAAYTDVDGAEEDPRRAFLVN--GLAVKYLASLCAASEAKLV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G K Y D P+N YG+SK E I E+ ++ I+R S ++G
Sbjct: 98 HISTDYVFDGEKGEPYHVYDPPRPINRYGESKYWGEAAIREEGGDYLIVRISWLFGTGR- 156
Query: 184 SPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILAL 228
++ +L E +++ D+ P Y D + I L
Sbjct: 157 ---------NFVSMILRLAETEGEIKVVEDQYGSPTYTPDAARAITDL 195
>gi|282164741|ref|YP_003357126.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola
SANAE]
gi|282157055|dbj|BAI62143.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola
SANAE]
Length = 288
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 43/239 (17%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIH 125
A +K +P ++ +S CE + AM N + F E +L +I+
Sbjct: 50 ARVVKQAKPQHLILTEEISSVEYCEKNRLDAMEFNTRGTRF-----FVEASSSLRPRVIY 104
Query: 126 LSTDQVYEGVK--SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
LS+ V++G K Y E D + P+NVYG++K+ E + +K ++ LR +YG +
Sbjct: 105 LSSAFVFDGRKPGGLYAEHDHVNPINVYGETKLMGEVAV-DKAADHITLRLGDVYGNFSD 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V ++ S L+ G+K+E D P+Y+ DV K + LT + M L
Sbjct: 164 NFV------NFVVSSLNYGQKIELARDMYFSPIYIEDVAKAVRLLTL------ENMSGLY 211
Query: 244 NVGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQTLNI 282
NV G +R+S +M E+ V+ P D+S+D +K+ + I
Sbjct: 212 NVAGTERISHYEMGLRVARAFGLKEDMLVPLSMEEMGLTVRMPKDLSLDTSKISTLIKI 270
>gi|114563992|ref|YP_751506.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB
400]
gi|114335285|gb|ABI72667.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB
400]
Length = 291
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%), Gaps = 23/236 (9%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSF 115
++D+ D + +F QP++++N AA + E + + A +IN P +L ++
Sbjct: 35 ELDITDSIQVDKIVTEF-QPNIIINAAAYTAVDKAEQESELAFAINRYGPQNL-----AY 88
Query: 116 TENKENL-LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
NK N ++H+STD V++G + Y E D AP YG+SK+A E + + C ILR
Sbjct: 89 AANKINAAILHISTDYVFDGNSAESYTESDVTAPQGEYGRSKLAGEHAVAQACPKHIILR 148
Query: 174 SSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
++ ++G + + V L + E + D+ P Y D+ K IL ++ + +
Sbjct: 149 TAWVFGERGNNFVKTML------RLAKTRESLGVVGDQFGGPTYAGDIAKAILTISKQVV 202
Query: 234 SEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
E K + G P VS A + +I+++ VQ + ++P+T D
Sbjct: 203 RESKAYGIYHFSGFP-HVSWYIFA------KKIFEIALEQDLHVQPIQVNPITTLD 251
>gi|158605288|gb|ABW74898.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. ATCC 53159]
Length = 288
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 36 THHSTPLPQLLLD-ALPHSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
T H + Q L + A+ H VF + DL +A + PD++V+ AA +
Sbjct: 6 TGHDGQVAQSLAEQAVGHELVFTTYPEFDLSKPETIEAGVARV-HPDLIVSAAAYTAVDK 64
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
E++P+ AM+IN V L+ +IHLSTD V++G + ++E+D P+ V
Sbjct: 65 AESEPELAMAINGDGPGV--LARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGPLGV 122
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YG +K+A E+ + + A++R + +Y P + V L + + + D
Sbjct: 123 YGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTML------RLAETRDALNVVED 176
Query: 211 ECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGG------PDRVSRVQMAEVDRGVQ 264
+ CP D+ IL + W +D L + G D S + RG
Sbjct: 177 QWGCPSSALDIATAILTVVGHW-QQDGATSGLYHFAGTGETNWADFASTIFAESAKRGGP 235
Query: 265 S-----------------PADISMDITKLVQTLNIDPVTYKDGVKLTL 295
S PA+ +D T+ +T ++D + + L
Sbjct: 236 SATVTGIPSSGYPTPATRPANSRLDCTRFAETFGYRAPAWQDSLNVVL 283
>gi|16357462|gb|AAL18014.1| dTDP-dehydrorhamnose reductase [Aneurinibacillus thermoaerophilus]
Length = 282
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV++ AA + + E + ++A +N + ++ E L+++STD V++G
Sbjct: 51 QPDVVIHAAAYTKVDLAETEVNTAYKVNALGT--RNVAVAAEACRAKLVYISTDYVFDGQ 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E P ++YGKSK+A E F+ + CS F I+R+S +YG + V L +
Sbjct: 109 AAGPYHEFAPTNPQSIYGKSKLAGESFVQQLCSRFFIVRTSWVYGKYGHNFVKTMLRL-- 166
Query: 195 IDSVLSKGEKVEF--FHDECRCPVYVRDVVKIILAL 228
GE+ E HD+ CP Y D+ +L L
Sbjct: 167 ------AGERDELNVVHDQVGCPTYTVDLAAFVLNL 196
>gi|312797096|ref|YP_004030018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
gi|303399366|emb|CBK52866.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
gi|312168871|emb|CBW75874.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454]
Length = 312
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S+ +LV G TG +G L++ + + GK V A +T DL
Sbjct: 10 SEATILVTGVTGQIGSELVRTMQGL-GK---VVAVDRAT------------------FDL 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AV ++ +P V+VN AA + +++PD AM +N + V L+
Sbjct: 48 TEPNQMRAV-IRAIKPTVIVNPAAYTAVDAAQSNPDLAMQVNAKAPGV--LAEEARRVGA 104
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+IH STD V+ G K S Y EEDE P NVYG SK+A E+ I ++ ILR+S +YG
Sbjct: 105 AMIHYSTDYVFNGEKDSPYVEEDEADPKNVYGFSKLAGERAIASAGAHHLILRTSWVYG 163
>gi|448290185|ref|ZP_21481337.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
gi|445579257|gb|ELY33652.1| RmlD substrate binding domain superfamily protein [Haloferax
volcanii DS2]
Length = 203
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 117 ENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+++E IH STD V++G FY+E DE AP+ YG+SK+ E + + + ILR S
Sbjct: 3 DDREIPFIHYSTDYVFDGETDGFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLS 62
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS- 234
+YG + + P QW+ S L+ G+ V F D+ P +V L L + +S
Sbjct: 63 FVYGARGDTSDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVATTTLELLDAGVSG 121
Query: 235 ------------EDKQMQLLLNVGGPDR-VSRVQMAEVDRGVQSPADISMDITKLVQTLN 281
D ++ +GG + MA++DR P +D++ + L
Sbjct: 122 TFHVASQSAVTPSDFGEKICEVIGGDATLIESSVMADLDRPAARPRRSCLDVSNVEGELG 181
Query: 282 IDPVTYKDGVKLTLAA 297
T +D + AA
Sbjct: 182 CSQPTLEDDLAALEAA 197
>gi|421483835|ref|ZP_15931408.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
gi|400198118|gb|EJO31081.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii HLE]
Length = 298
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 72/321 (22%)
Query: 5 RVLVVGGTGYLGQ---HLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++L++G G +GQ H L L E+ +P L H DVDL
Sbjct: 2 KILLLGKAGQIGQELRHALPALGEV---------------VP------LGHG----DVDL 36
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ AL +PDV+VN AA + E D ++A +N + V L+ + ++
Sbjct: 37 RDQDAL-LRALAAHRPDVIVNAAAYTAVDQAETDREAADQVNAQA--VTALAQYAKDASA 93
Query: 122 LLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LL+H STD V++G Y E D P+NVYG +K+ E + E + + R S +Y P
Sbjct: 94 LLVHYSTDYVFDGDSDQPYTETDTPRPLNVYGATKLGGESAVLESGCDALVFRCSWVYAP 153
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
++ P + ++ ++++ D+ P +I +T + ++ +Q +
Sbjct: 154 HG-----RNFPTSILRLARTR-DRLDVVADQIGAPT----SASLIADVTAQAVARHRQQR 203
Query: 241 L-----LLNVGG-------------------------PDRVSRVQMAEVDRGVQSPADIS 270
L L GG PDR+ + + + P +
Sbjct: 204 LPAGIYHLAAGGATSWHAFARYLVSGAAARGAALALTPDRIRAIASKDYPAAAKRPHNSR 263
Query: 271 MDITKLVQTLNIDPVTYKDGV 291
+D T+L L + ++ G
Sbjct: 264 LDTTRLSAALALRLPSWTQGA 284
>gi|365119316|ref|ZP_09337438.1| dTDP-4-dehydrorhamnose reductase [Tannerella sp. 6_1_58FAA_CT1]
gi|363648637|gb|EHL87791.1| dTDP-4-dehydrorhamnose reductase [Tannerella sp. 6_1_58FAA_CT1]
Length = 286
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 40/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G LG + + L+E + K ++F+F D+
Sbjct: 3 KILVTGANGQLGNEM-RCLAEEDKK----------------------NTFLFTDIQDLDI 39
Query: 65 SGFDAVALKF--GQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ +AV +K+ G +V+VNCAA + E++ D+ IN + ++ +
Sbjct: 40 TDLEAV-MKYVAGHGIEVIVNCAAYTAVDKAEDNEDTCRKINALAVANLAKAAAMNRAK- 97
Query: 122 LLIHLSTDQVYEGVKSFYK---EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+IH+STD VY GV +YK E DE AP +VYG +K+ E+ +++ CS+ +LR+S +Y
Sbjct: 98 -VIHISTDYVYSGV--YYKPYSESDETAPCSVYGVTKLEGERLLFDNCSDAVVLRTSWLY 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V + + + EK+ D+ P Y D+ K I+ +
Sbjct: 155 SAYGNNFVKTMIRLG------KEREKLSVVFDQIGTPTYAGDLAKAIMII 198
>gi|212558782|gb|ACJ31236.1| NAD dependent epimerase/dehydratase family protein [Shewanella
piezotolerans WP3]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V+V G TG LG+ ++ +E+E +P +V A +S + + +DL
Sbjct: 3 KVMVTGATGLLGRAVV---AELEAQPDVEVLACGYSRAVQGV-----------HRLDLTL 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S A ++ QPDV+V+CAA P + E +P +A+++N ++ + L++ L
Sbjct: 49 SSQVTAF-IETHQPDVIVHCAAERRPDISEQNPAAALALNADATRLLTLAA--SQCGAWL 105
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+++STD V++G Y E PVN YG SK E + E FA+LR I+YG +
Sbjct: 106 LYVSTDYVFDGTAPPYNEHSATNPVNFYGDSKRQGEMIVTEAKQGFAVLRLPILYG--AV 163
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKII 225
+ +S + ++ +L + E +F D R P D+ I
Sbjct: 164 ETLQESAVMVLLNQLLDENE--QFVDDWAVRSPTSTEDIASAI 204
>gi|386390083|ref|ZP_10074879.1| dTDP-4-dehydrorhamnose reductase [Haemophilus paraphrohaemolyticus
HK411]
gi|385693767|gb|EIG24399.1| dTDP-4-dehydrorhamnose reductase [Haemophilus paraphrohaemolyticus
HK411]
Length = 292
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA + E + + + +INV +L+ +N ++H+STD V++G
Sbjct: 51 RPDVIINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKNVGAAILHISTDYVFDGQ 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ YKE D P VYGK+K+A E+ + F +LR++ ++G + V L +
Sbjct: 109 REGKYKETDATEPQGVYGKTKLAGEQAVANSNDKFIVLRTAWVFGEHGNNFVKTMLRLAK 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS-EDKQMQLLLNVGGP----- 248
L D+ P Y D+ ++ + + ++ ED Q + G P
Sbjct: 169 TRDTLG------VVADQIGGPTYSGDIAASLIQIAEKIIAGEDVQYGIYHFTGEPYISWC 222
Query: 249 -------DR------------VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYKD 289
D V+ + A+ + PA+ +D+TK+ Q I P +K
Sbjct: 223 DFAKAIFDEAVSQNVLEKSPLVNAITTADYPTPAKRPANSCLDLTKIQQVFGIQPSDWKK 282
Query: 290 GVK 292
+K
Sbjct: 283 ALK 285
>gi|416103354|ref|ZP_11589347.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|3132256|dbj|BAA28133.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus
actinomycetemcomitans]
gi|348008089|gb|EGY48368.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 294
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 131/317 (41%), Gaps = 61/317 (19%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LG+ L + L ++ Y+V A S LD VF +D
Sbjct: 3 RLLITGAGGQLGRSLAKLL--VDNGRYEVLALDFSE------LDITNKDMVFSIID---- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F +P+V++N AA + E + SA S+NV V +L+ + ++
Sbjct: 51 --------SF-KPNVIINAAAYTSVDQAELEVSSAYSVNVRG--VQYLAEAAIRHNSAIL 99
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G KS YKE D I P+ VYGKSK E+ + ILR+S +G
Sbjct: 100 HVSTDYVFDGYKSGKYKETDIIHPLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR------------ 231
+ V L + +L D+ P Y D+ +++ + +
Sbjct: 160 NFVKTMLRLAKNRDILG------VVADQIGGPTYSGDIASVLIQIAEKIIVGETVKYGIY 213
Query: 232 ---------W-------LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITK 275
W E ++L NV V+ + A+ + PA+ +D+TK
Sbjct: 214 HFTGEPCVSWYDFAIAIFDEAVAQKVLENV---PLVNAITTADYPTLAKRPANSCLDLTK 270
Query: 276 LVQTLNIDPVTYKDGVK 292
+ Q I P ++ +K
Sbjct: 271 IQQAFGIQPSDWQRALK 287
>gi|404403584|ref|ZP_10995168.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fuscovaginae UPB0736]
Length = 294
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +IN + + L+ + LIH STD V++G
Sbjct: 55 RPDLIINAAAHTAVDQAESEPDLAFAINATAPGI--LAQEAADLGIPLIHYSTDYVFDGS 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+DE P++VYG+SK+ E+ I S ILR+S +Y + + L +Q
Sbjct: 113 KAEPYTEDDETNPLSVYGRSKLTGERSIAAAHSQHLILRTSWVYSNHGRNFL---LTMQ- 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+L + ++ D+ P + + AL RW
Sbjct: 169 --RLLQEKPELRIVADQVGAPTWAGTIANSTRALIERW 204
>gi|289577888|ref|YP_003476515.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9]
gi|289527601|gb|ADD01953.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9]
Length = 298
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D D+A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDKCESDVDTAFKVNAIGPRNL----AIAAQRVGAKLLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G + ++E D P+NVYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGNVPFREYDVPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + KG +E +D+ P D+ IL L
Sbjct: 174 SILKAAKEKG-YLEVVNDQKGNPTNAEDLAHHILKL 208
>gi|21227270|ref|NP_633192.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1]
gi|452209765|ref|YP_007489879.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Tuc01]
gi|20905619|gb|AAM30864.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1]
gi|452099667|gb|AGF96607.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Tuc01]
Length = 269
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L++G +G LG L + P V THH D+D+
Sbjct: 7 KTLIIGSSGMLGSDLCKVF------PDAVKLTHH-------------------DLDITDR 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDVV+N AA + CE++ + A +N S +++ L+
Sbjct: 42 EQVIESILKI-KPDVVINAAAYTNVDGCEDNKELAFQVN--GSGPGYIAEACARAGAKLV 98
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V++G K Y E D P+NVYG SK+ EK I E ++ I+R S ++G +
Sbjct: 99 HFSTDYVFDGSKKEYVESDIPDPINVYGDSKLLGEKKIIENMDDYRIVRISWLFGIHGKN 158
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
V L + + + V+ +D+ P Y D+ +
Sbjct: 159 FVETMLKLS------GEMDTVKVVNDQFGKPTYTMDLAR 191
>gi|160425319|gb|ABX39511.1| RmlD [Aeromonas hydrophila]
Length = 300
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PDV++NCAA + E +P+ A +N + L + E+ LL+H STD V++G
Sbjct: 53 HPDVIINCAAYTAVDAAETEPELADEVNHKALLS--MDRGAEDLGALLVHFSTDYVFDGT 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ-------TISPVP 187
S + E D+ +P+NVYG SK A E I C + I+R+ +YG + ++
Sbjct: 111 GSQPWLETDQPSPLNVYGASKYAGELAIQRLCPDHLIIRTGWLYGGEGKHFARTILARAS 170
Query: 188 KSLPI-----QW----------------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
+ LP+ QW + V+ KV +H CR ++
Sbjct: 171 QGLPLGVVADQWGAPTQVDWLARASVLALSQVVRSPSKVGLYHLTCRGETSWHGFASALV 230
Query: 227 ALTNR--WLSEDKQMQLLLNVGGPDRVSRVQMAEVD 260
+R WL + ++ + + P + R + +D
Sbjct: 231 NGAHRRGWLKKQVAIRCIGSGEWPQQACRPLNSRLD 266
>gi|420242839|ref|ZP_14746830.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF080]
gi|398065237|gb|EJL56886.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. CF080]
Length = 309
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHL 126
A ++ +PD++V+ AA + + E D +A+SIN P L ++ ++HL
Sbjct: 50 AATVQAARPDLIVSAAAFTGVDLAETDAATAISINATGPGELARVAATL----RVPIVHL 105
Query: 127 STDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
STD V++G K S Y E D +AP+ VYG+SK+ E+ + ++AILR++ IY P
Sbjct: 106 STDYVFDGSKPSPYGESDPVAPLGVYGRSKLMGEQNVAAATEDYAILRTAWIYSP 160
>gi|423479412|ref|ZP_17456127.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG6X1-1]
gi|402425716|gb|EJV57862.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG6X1-1]
Length = 279
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 52/292 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LGQ +L +E +P+++ F ++D+ +
Sbjct: 2 KVLVTGAKGQLGQDVL---CLLENQPWEI------------------FGFGRKELDITNE 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L +PD++++ AA + E+D ++A +N + +L+ E
Sbjct: 41 EQVCEKVLSI-KPDIIIHTAAYTQVDQAESDEETAFKVNAEGT--KYLAKAAETVGARFC 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y+ ED+ P VYGKSK+ E++ E CS + I+R+S ++G
Sbjct: 98 YVSTDYVFDGTKKEPYQTEDQTNPQTVYGKSKLVGEQYTREYCSKYFIVRTSWVFGLYGN 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNR---------- 231
+ V L + + ++ D+ P Y D+ + I+ L TN+
Sbjct: 158 NFVKTMLRL------ADERSELGVVSDQFGSPTYTTDLARFIIELVATNKYGIYHASNSG 211
Query: 232 ---WLSEDKQM--QLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQ 278
W K++ Q N+ V+ + AE R Q PA +++ K+ +
Sbjct: 212 ICSWYEFAKEIFRQSNKNIN----VNAISTAEFPRPAQRPAYSALEQKKITE 259
>gi|88800555|ref|ZP_01116117.1| dTDP-4-dehydrorhamnose reductase [Reinekea blandensis MED297]
gi|88776700|gb|EAR07913.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297]
Length = 295
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 42/225 (18%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ GGTG +G L + L+ D+ A P P+ ++DL S
Sbjct: 3 VLITGGTGQVGFELQRTLAVFG----DIVA-----PTPE-------------ELDLADAS 40
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLL 123
+ L+ P +VVN AA + E +P+ A ++N +P+ L N+ + + L
Sbjct: 41 AVERF-LEQTHPTIVVNAAAYTAVDKAEEEPELAQALNADLPAQLANYCA----RQSAWL 95
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD VY+G +SF E+ + P++VYGK+K+A + I + I R+S +YG +
Sbjct: 96 VHYSTDYVYDGAGESFRTEDHPVNPLSVYGKTKLAGDNAIEASGAQHFIFRTSWVYGARG 155
Query: 183 ISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKI 224
+ ++ ++L GE ++ +D+ P R + ++
Sbjct: 156 HN---------FVKTMLRLGESKSELNVVNDQIGAPTTARLIAQV 191
>gi|222148116|ref|YP_002549073.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
gi|221735104|gb|ACM36067.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4]
Length = 301
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
KR LV G G + Q LL+ S+ K D+ A PQL DL
Sbjct: 5 KRYLVTGLAGQVVQSLLEKASD--RKDIDLVALGR----PQL--------------DLAD 44
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +A L +PD++++ AA + E D +A ++N L+ + + +
Sbjct: 45 PATIEAAVLA-AKPDLIISAAAYTAVDQAETDEATAFTVNGEGP--GELARVAKALDIPI 101
Query: 124 IHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G K S Y E D +AP+ VYG+SK+ E+ + + N AILR++ +Y
Sbjct: 102 IHISTDYVFDGSKASPYNEADPVAPLGVYGRSKLEGERRVAAETDNHAILRTAWVY---- 157
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
SP K+ + + ++ E + D+ P D+ +L + + LS
Sbjct: 158 -SPFGKNFLLTMLRLAETRDE-LGVVADQIGNPTSALDIADAVLKVADNLLS 207
>gi|229587852|ref|YP_002869971.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
SBW25]
gi|229359718|emb|CAY46566.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens
SBW25]
Length = 289
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +PD+++N AA + E++PD+A +IN + V E + L LIH ST
Sbjct: 46 IRAHRPDLIINAAAHTAVDQAESEPDAAFAINAIAPGV-----LAEEAKALGIPLIHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D P+ VYG+SK+A E+ I ++ ILR+S +Y S
Sbjct: 101 DYVFDGSKPDPYTEADTPNPLGVYGQSKLAGEEAIAAVGGDYLILRTSWVY-----SSHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS------------- 234
K+ + + +L + ++ D+ P + + + AL RW +
Sbjct: 156 KNFLLT-MQRLLQEKPQMRIVADQIGAPTWAGSIARSTRALIERWQAGEPGEWGIYHLTN 214
Query: 235 --EDKQMQLLLNVGGPDRVSRVQMAEVD--------RGVQSPADISMDITKLVQTLNIDP 284
E +G R AE++ + P + +D ++L Q ++
Sbjct: 215 QGETSWFGFAEAIGAHLRTQGKACAELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQ 274
Query: 285 VTYKDGVKLTLA 296
+++D ++ LA
Sbjct: 275 PSWQDALRECLA 286
>gi|160945148|ref|ZP_02092374.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii
M21/2]
gi|158442879|gb|EDP19884.1| spore coat polysaccharide biosynthesis protein SpsK
[Faecalibacterium prausnitzii M21/2]
Length = 278
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQ---GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K++LV G G++G ++Q G E+ P AT + Q +L
Sbjct: 2 KKILVTGAGGFVGSRVVQQWSGRYELCTFPKGFLATAREDAVRQAVLQQ----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+PD +++ AA+S C + P+ A NV L WL+
Sbjct: 51 ---------------RPDGILHTAAISDTGYCADHPEQAYRANV--ELPVWLARAAAEIG 93
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+ S+DQVY GV+ E + P NVYG+ K+ E+ + C +LR++ +Y
Sbjct: 94 AKLVAFSSDQVYAGVEQSGPLPETIPLKPANVYGQDKLEMEQRVQALCPGAVLLRATWMY 153
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILA 227
P P+ +LP+ + + +GE V F + R YVR V ++ A
Sbjct: 154 DLPGYRLPIRGNLPLNLLRAA-QRGESVRFSVRDFRGITYVRQAVALLEA 202
>gi|254250399|ref|ZP_04943718.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia PC184]
gi|124879533|gb|EAY66889.1| NAD dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia PC184]
Length = 321
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 20/240 (8%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+K VL++G +G LG+ + L+ E +A + LL P + DV
Sbjct: 10 RKTVLLIGASGLLGRAVAACLAR-ESSLTLLATIRNPQSAGAKLLALPPENIAELDV--- 65
Query: 63 SGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
D +L+ +P V+ CAA P VCE DPD+A +INV + + +
Sbjct: 66 ----LDQPSLERIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPAR--IGALATR 119
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +++
Sbjct: 120 YGAWTLGISTDYVFDGKAAPYREDATPNPLNIYGRTKLEGEVALLAASPLSCVLRLPLLF 179
Query: 179 GPQTISPVPKSLPIQWIDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
GP I+ +S + +V++ + V R P + DV ++I LT R L+
Sbjct: 180 GP--IADWSESAVTSLVPAVVASSRPGADAVGMDAWAIRYPTWTPDVAQVIRDLTLRHLA 237
>gi|357635788|ref|ZP_09133665.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B]
gi|357580628|gb|EHJ45962.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B]
Length = 321
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 29/255 (11%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+++R+LV G +G LG ++ L + ++V T+ + P V +D+
Sbjct: 3 ARRRLLVTGASGLLGGNVALALC----RDWEVVGTYAAHPFSL-------AGTVSRRLDI 51
Query: 62 KSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+S VA F +P+V V+CAA + CE PD A ++N + ++
Sbjct: 52 RSDG---EVAALFADIRPEVTVHCAAETRVDACEARPDEAFAVNARAPGRLARAARAAG- 107
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+L +H+STD VY + + E PVN Y SK+A E+ + E I+R+++
Sbjct: 108 -SLFVHVSTDAVYAPGGAPHAESAPTGPVNAYAASKLAGEEAVAEAGGECLIVRTNLF-- 164
Query: 180 PQTISPVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
S K +W + L + GE + F D P+ D+ + I AL
Sbjct: 165 --GWSGRAKRSLAEWALARLEAGGEPLTGFTDAVFSPLLASDLARAIEALVR------AG 216
Query: 239 MQLLLNVGGPDRVSR 253
+ + N G D VS+
Sbjct: 217 ARGVYNAGAADAVSK 231
>gi|222528113|ref|YP_002571995.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM
6725]
gi|222454960|gb|ACM59222.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM
6725]
Length = 281
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P+++++CAA + CE+D D+A +N + +++ E L+++STD V++G
Sbjct: 49 KPNIIIHCAAYTNVDGCESDKDTAFKVNAIGTRNVAMAA--EKVGAKLVYISTDYVFDGE 106
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D P+++YG SK+A E+F+ CS + I+R + +YG + V + +
Sbjct: 107 KEKPYNEFDRPNPISIYGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKL-- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
KGE ++ +D+ P + +DVV+ + + N
Sbjct: 165 ---AKEKGE-IDVVNDQRGNPTFTKDVVQAVEVIMN 196
>gi|108763033|ref|YP_632780.1| dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622]
gi|108466913|gb|ABF92098.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK
1622]
Length = 300
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A++ P+VV++CA+++ CE DP++A + NV ++ S+ L+H+ST
Sbjct: 55 AAAVETAAPEVVIHCASMTEVDACEKDPEAAYAGNVTAAAAVARSARKAGAH--LVHVST 112
Query: 129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
D V++G Y E+ P VY +K E+ AI R++++YG PV
Sbjct: 113 DYVFDGEAGPYSEDAIPNPRGVYSVTKHMGEQAARMLAPGCAIARTAVVYG---WPPVEG 169
Query: 189 SLPI-QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
L W+ + L KG++V F D+ P + +V +++ L R L
Sbjct: 170 RLNFGAWLVTALEKGQQVRLFEDQIVSPSFADNVAAMLVELGTRRLG 216
>gi|398812658|ref|ZP_10571375.1| dTDP-4-dehydrorhamnose reductase [Variovorax sp. CF313]
gi|398076827|gb|EJL67875.1| dTDP-4-dehydrorhamnose reductase [Variovorax sp. CF313]
Length = 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++PD A +N S V ++ L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPDFARKLNATSPGV--VAEAARQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V++G + +KE D P++VYG++K+ E+ + + C N I R+S +Y
Sbjct: 101 HYSTDYVFDGSGTRPWKEGDATGPLSVYGQTKLEGEQLVAQNCPNHLIFRTSWVY 155
>gi|282898470|ref|ZP_06306460.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
gi|281196636|gb|EFA71542.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii
D9]
Length = 303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++PD AMSIN + + L+ + +IH STD V++G
Sbjct: 50 KPDLIVNPAAYTAVDRAESEPDLAMSINGVAPGI--LAEEAKRLGGAIIHYSTDYVFDGN 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
++ YKE D P NVYGK+K+A EK I N I R+S +YG + + + L +Q
Sbjct: 108 QNTPYKENDSTFPQNVYGKTKLAGEKAIQAVGVNHLIFRTSWVYGLRGNNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKI 224
+ + E++ D+ P + R + ++
Sbjct: 164 --RLAKEREEIRVVDDQIGSPTWSRMIAEV 191
>gi|325279645|ref|YP_004252187.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM
20712]
gi|324311454|gb|ADY32007.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM
20712]
Length = 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 60/315 (19%)
Query: 6 VLVVGGTGYLGQHLLQ-GLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+L+ G G LG L + G S PL ++ F DV
Sbjct: 4 ILITGANGQLGSELRKIGFS----------------PLDEVF---------FTDVAELDI 38
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + A+ ++ + D ++NCAA + E++P A IN + V L+ + + L
Sbjct: 39 TDYTAIEKFIQVHEVDTIINCAAYTAVDRAEDEPGPAAEIN--TQAVANLAKAAQKGDCL 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G + Y E+ + PV+VYGK+K+A E+ I + I+R++ +Y
Sbjct: 97 LIHISTDYVFDGTATTPYTEKIKTCPVSVYGKTKLAGEEAIIRSGCFYIIIRTAWLYS-- 154
Query: 182 TISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKI---ILALTNRWLSE 235
+ ++ ++L E ++ +D+ P Y D+ K I+A +R E
Sbjct: 155 -------AFGHNFVKTILRLAEERPEINVVNDQIGTPTYAEDLAKAIVKIMANDDRVEHE 207
Query: 236 --------------DKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLN 281
D ++++ G RV+ V AE PA +D TK+ T
Sbjct: 208 GIYHYSNAGVCSWYDFAVEIVRLSGLNCRVNPVTTAEYPTKTHRPAYSVLDKTKIKHTFG 267
Query: 282 IDPVTYKDGVKLTLA 296
++ +++ ++ +
Sbjct: 268 VEVPEWQEALRRMMG 282
>gi|315499261|ref|YP_004088065.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48]
gi|315417273|gb|ADU13914.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48]
Length = 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K +PDV+++ AA + E++ + A +IN L+ + L+HLSTD V
Sbjct: 47 IKAARPDVIISSAAYTAVDKAESETELAQAIN--GDGPGALAKIAAELDIPLLHLSTDYV 104
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G K Y E D PV+VYG +K++ E I +N ILR++ +Y P +
Sbjct: 105 FAGDKDGIYTESDAPGPVSVYGMTKLSGETQIAAATANHVILRTAWVYSPYGNN------ 158
Query: 191 PIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVG 246
++ ++L GE ++ D+ CP Y ++ + +L + R + D +++ + ++
Sbjct: 159 ---FVKTMLRLGETRDELNVVADQKGCPTYAPEIARALLHIAQRVSKDPDPKLRGIFHLT 215
Query: 247 GPDRVSRVQMAEV 259
G + AEV
Sbjct: 216 GQGETTWAGFAEV 228
>gi|323525478|ref|YP_004227631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001]
gi|323382480|gb|ADX54571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ G+P + V T S P P ++ +D++
Sbjct: 3 KVAVMGASGLLGRAIVD---ELAGQPDWQVVGTAFSRPTPNTVV-----------LDVRE 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + PD +V AA P VCE P+ A ++NV + ++ L
Sbjct: 49 ARAIEQF-IDREAPDALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLS 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
I STD V++G + Y+ + E AP+N YG+SK+ E+ + +LR ++YGP
Sbjct: 108 I--STDYVFDGTRPPYRPDSEPAPLNAYGRSKLEGERALAAATDFGCVLRLPLLYGP 162
>gi|302911314|ref|XP_003050465.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731402|gb|EEU44752.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 319
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M ++ VLV G TG LG+ + + ++V T +S VD
Sbjct: 1 MPERTVLVTGATGLLGREVSASFGL---RGWNVKGTGYSRA----------DGISTLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S A L+ +P V+V+CAA P + DP++A ++NV +S LS +++
Sbjct: 48 LSNESEV-ASLLEETKPQVIVHCAAQRFPDKVDKDPEAARALNVAAS--KSLSQLAVDRD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+I++STD V+ GV + Y+ + E P N+YG++K+ E+ + E + +L
Sbjct: 105 IFVIYISTDYVFPGVPGDAPYEADAEPRPTNLYGQTKLDGERAVLETFAKAGKEGLGVVL 164
Query: 173 RSSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
R ++YG +T + ++ + + ++G +V H R P D+ ++ ++ +
Sbjct: 165 RVPVLYGNAETPAESAVNVLMDALWKAQTQGIEVNMDHWAIRYPTNTEDIGRVCHDISVK 224
Query: 232 WL----SEDKQMQLLLNVGGPDRVSRVQMAEV 259
+L + + +L DR+++ ++ ++
Sbjct: 225 YLDTAPGDRAGLPHILQFSSEDRMTKYEIVQL 256
>gi|400600865|gb|EJP68533.1| RmlD substrate binding domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + V++ G TG LG+ + + K ++V T S VD
Sbjct: 1 MVDRTVVITGATGLLGRQVSRVFRR---KGWNVKGTGFSRA----------DGVDVLKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + S + + L+ P+V+V+CAA P E DP+ A +NV S + L+ K
Sbjct: 48 LGNPSEIEKL-LEETNPEVIVHCAAERFPDKVEKDPEGARKLNV--SATSSLAQAAAAKG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYE----KCSNFAILRS 174
LI++STD V+ G ++ Y+ + E P N+YG++K+ EK + K + +LR
Sbjct: 105 AFLIYISTDYVFPGRPGEAPYEADSETNPPNLYGQTKLDGEKAVLAVNGGKAGSAVVLRV 164
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
++YG +P ++ + +D V ++ +K++ H R P DV ++ +
Sbjct: 165 PVLYG-SAETPAESAVNV-LLDGVWKSQTEDKKIKMDHWAPRYPTNTEDVGRVCHDIAEH 222
Query: 232 WLSEDKQMQL--LLNVGGPDRVSRVQMAE 258
+L ++ L +L DR+++ +M +
Sbjct: 223 YLRASDRVSLPKILQFSSEDRMTKYEMCQ 251
>gi|367024813|ref|XP_003661691.1| hypothetical protein MYCTH_2314646 [Myceliophthora thermophila ATCC
42464]
gi|347008959|gb|AEO56446.1| hypothetical protein MYCTH_2314646 [Myceliophthora thermophila ATCC
42464]
Length = 319
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 51/320 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS K L+ G TG+LG+ +++ A H T A VD
Sbjct: 1 MSGKVALITGATGFLGRQVVKAF-----------AFHDWTAKGTGFSRA--DGVNILKVD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + A++ +P VV++CAA P + DP +N+ +S L+ ++
Sbjct: 48 LANSAEIEN-AIEEVKPQVVIHCAANRYPDKVDKDPSGTRVLNIEASRT--LAQHCARRD 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LLI++STD V+ G ++ Y+ + P N+YG++K+ E + + +L
Sbjct: 105 ILLIYISTDYVFPGRPGEAPYEADAATGPTNLYGQTKLDGEGAVLGAFRDAGKDGLGVVL 164
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALT 229
R ++YG +S +D VL KG K V+ H R P DV ++ +
Sbjct: 165 RVPVLYGEVEGGRNEESAVNCLMDVVLGKGGKTGQVKMDHWAIRYPTNTEDVARVCYDVA 224
Query: 230 NRWLSEDKQMQL--LLNVGGPDRVSRVQMAE---------VDR------------GVQSP 266
R+L E + L +L D+ ++ ++ + +DR VQ P
Sbjct: 225 VRYLGEADKASLPRVLQFSSEDKYTKYEICQLFGEIMGVPIDRIVPNTEGNDPNSSVQRP 284
Query: 267 ADISMDITKLVQTLNIDPVT 286
D + TK ++ L ID T
Sbjct: 285 YDCHLS-TKALKELGIDVST 303
>gi|300865161|ref|ZP_07109985.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC
6506]
gi|300336851|emb|CBN55135.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC
6506]
Length = 287
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 47/297 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV+GG+G +G HLLQ + + ++V T+ + P L+ + ++ + +S
Sbjct: 2 KVLVIGGSGLVGSHLLQTCHQ---RGWNVTGTYQNFAQPGLIPLQITNAAAVRSLITES- 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
QP+VV A S CE +P+ INV L ++ T + L+
Sbjct: 58 -----------QPEVVFLPAFRSNVDYCEQNPEETYQINVVGCLN--VAHATRDVRAKLV 104
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D V+ G Y+E D+ P+ VYG K+ E+ I E ++ I R + +YG +
Sbjct: 105 FYSSDYVFNGKNGPYQEIDKPDPICVYGLQKLEVEEKISELLDDYLICRIAWVYGQEKQG 164
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K+ ++ I S+L+ + + D+ P D+ + L + + L +
Sbjct: 165 ---KNFVLRLI-SMLTNNQAIRVPQDQVGSPTLADDIGEASCRLV------EVGAKGLFH 214
Query: 245 VGGPDRVSRVQMA--------------------EVDRGVQSPADISMDITKLVQTLN 281
+ G D ++R Q A E+++ P M +LVQ LN
Sbjct: 215 ITGIDCMNRYQFALKIAEVFGLQTDTLLPVMTSELNQAAARPLKCGMRCDRLVQNLN 271
>gi|222053767|ref|YP_002536129.1| dTDP-4-dehydrorhamnose reductase [Geobacter daltonii FRC-32]
gi|221563056|gb|ACM19028.1| dTDP-4-dehydrorhamnose reductase [Geobacter daltonii FRC-32]
Length = 291
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P++V+N AA + CE DP A+ +N + L+ + ++ LL+H+S+D V+ G
Sbjct: 55 KPELVINAAAFNGVDACEKDPHQALLVN--TLFPRLLAELSASQGFLLVHISSDAVFSGT 112
Query: 136 -KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E +P+N+YG +K A+ FI + I R S+ +G T SP Q+
Sbjct: 113 GRETYAESSAASPINLYGFTKYGADCFITAIAHRYYIARISVQFGITTGSP-------QF 165
Query: 195 IDSVLSK----GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQ 238
++ +L + E + +D P Y +DV I R L E+K+
Sbjct: 166 VEKMLERMQRSTEPLRISNDIVASPSYSQDVATAI-----RGLVEEKR 208
>gi|34499466|ref|NP_903681.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC
12472]
gi|34105318|gb|AAQ61673.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC
12472]
Length = 310
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 37/238 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ R+L+ G G +G LL+ L+ PL +L+ + ++D
Sbjct: 2 MTMPRILITGKNGQVGHELLRALA----------------PLGELI------ATDRRELD 39
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L AL PD++VN AA + E+D +A ++N + V ++ +T
Sbjct: 40 LTWDDARIEQALDQHGPDIIVNPAAYTAVDKAESDEATAHAVN--ACAVGVIARWTARHG 97
Query: 121 NLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
LL+H STD V+ G + ++E+D P +VYG+SK+A E+ I ILR+S ++G
Sbjct: 98 ALLVHYSTDYVFSGDGERPWREDDATGPQSVYGRSKLAGEEAIRHAAPRHLILRTSWVFG 157
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ ++ ++L G++ ++ +D+ P + + L R+L+
Sbjct: 158 AHGAN---------FLKTMLKLGQERDSLKVVNDQIGAPASAAMIADVSAELIRRYLA 206
>gi|54026611|ref|YP_120853.1| dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152]
gi|54018119|dbj|BAD59489.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM
10152]
Length = 285
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S R++V G G +G+HL++ G YD A D+
Sbjct: 9 SPARLVVTGAAGQVGRHLMRLAPHARG--YDRA---------------------HLDI-- 43
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ DAV DVV+NCAA + E +PD+A ++N V L+S
Sbjct: 44 ---TDADAVRAVVHPGDVVINCAAYTAVDKAETEPDAAFAVNGTGPAV--LASACARAGA 98
Query: 122 LLIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LIHLSTD V+ G + Y+ D AP + YG+SK+A E+ + + ++R++ +Y
Sbjct: 99 RLIHLSTDYVFGGTHTDPYEPTDPTAPASAYGRSKLAGERAVLDLAPAAHVVRTAWVY 156
>gi|350562916|ref|ZP_08931739.1| dTDP-4-dehydrorhamnose reductase [Thioalkalimicrobium aerophilum
AL3]
gi|349779782|gb|EGZ34123.1| dTDP-4-dehydrorhamnose reductase [Thioalkalimicrobium aerophilum
AL3]
Length = 321
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD-VDLKS 63
R+LVVG T LGQ L ++ G+ Y A + L SFV D +DL +
Sbjct: 10 RILVVGKTSQLGQ----SLQKLVGQAYHKQALRLCERSEAISLAGYDFSFVGRDTLDLAN 65
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S DA + DVV+NCAA + E +P+ A IN + V L+ + + ++ L
Sbjct: 66 PSAIDAF-FTHHRFDVVINCAAYTNVDQAELEPELANQINYLA--VKQLAKWAKLHKSFL 122
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+S+D V++G + Y E D P+N YG+SK+ +E+ I+R+S ++
Sbjct: 123 IHISSDYVFDGTATRPYLESDLPNPINCYGQSKLKSEQACLFINPRGVIIRTSWLFS--- 179
Query: 183 ISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIIL---ALTNRWLSED 236
++ ++L G E + D+ P Y D+ + +L A T + S +
Sbjct: 180 ------EFGHNFVKTMLRLGVMRETLAVVSDQLGSPTYATDLAQAVLSVIAHTAKSASSN 233
Query: 237 KQMQLLLNVG 246
++ N G
Sbjct: 234 MEIYHFTNAG 243
>gi|238023766|ref|YP_002907998.1| dTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1]
gi|237878431|gb|ACR30763.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1]
Length = 314
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V+ CAA P VCE++P +A +INV + + L +STD V++G
Sbjct: 73 RPDAVIVCAAERRPDVCEHEPAAARAINVEALAALAARADALGAWTLA--MSTDYVFDGR 130
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+ Y+E D AP+N YG+SK E + + + +LR ++YGP
Sbjct: 131 AAPYRETDPPAPLNAYGRSKADGEAALLDASARACVLRLPLLYGP 175
>gi|219852976|ref|YP_002467408.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c]
gi|219547235|gb|ACL17685.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c]
Length = 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 35/224 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R L+ GGTG LG+ +LQ P VA H V +
Sbjct: 23 RTLIFGGTGRLGR-VLQCT-----YPSSVAVGH--------------------TVPITDK 56
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A+ + +P +V+N AA + CE D A+ +N ++++ + L+
Sbjct: 57 EAVRALVERV-RPTLVLNAAAWTDVDGCEIDQTRALLVNGEGP--GYIATACKEVGATLV 113
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V+ G + Y E+D ++P+NVYG++K E+ + C ++ I+R+S ++GP +
Sbjct: 114 HFSTDYVFSGDRMVYYEDDPVSPINVYGRAKALGEERVMAGCHDYRIIRTSRLFGPYGEN 173
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
V +L +Q + + V +DE P Y+ D+ ++ A+
Sbjct: 174 FV--TLMLQRS----ADKKTVTVINDEVSSPTYIPDLASMVPAV 211
>gi|398308754|ref|ZP_10512228.1| dTDP-4-dehydrorhamnose reductase [Bacillus mojavensis RO-H-1]
Length = 283
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 41/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G +G LG L + L + Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGASGQLGLELCRRLKQ---AGYEVIA------LTKQMMNIADQRSVRHSFGHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD+VVN AA + CE + D A IN + L S
Sbjct: 52 ----------------QPDIVVNTAAFTSVDKCETELDKAYLINGIGAYYTALESSRIGA 95
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +H+STD V++G + Y+E+D + P +YGKSK E+ I ++ I+R+S +Y
Sbjct: 96 Q--YVHISTDYVFDGKGTQPYREDDHLDPNTIYGKSKKLGEELIQLARTDSTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G + V L + +++ +D+ P Y +D+ + ++ L
Sbjct: 154 GQSGSNFVHTMLKLA------ETKQELRVVNDQIGSPTYTKDLAEAVIKL 197
>gi|302343716|ref|YP_003808245.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075]
gi|301640329|gb|ADK85651.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075]
Length = 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 31/260 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+++KR+ ++G G LG+ +L+ +TP L L F ++D
Sbjct: 10 LAQKRIYILGAGGQLGREMLR-----------------ATPPAGLGL----RGFSRQELD 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + A A+ +VVNCAA + E+D ++ ++NV V ++ +
Sbjct: 49 VTDPTALMA-AIGAADCALVVNCAAYTAVDKAESDVQASFAVNVGG--VAAMARACDEAA 105
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+ST+ +++G K+ Y E D+ +P+N YG+ K AE+ + ILR+S ++
Sbjct: 106 VPLVHVSTEYIFDGRKNGPYVEADQPSPLNAYGQGKAEAERHVRLLAKRHVILRTSWLFS 165
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+ V + I + E++ D+ CP RD+ + I+ + + L+ +
Sbjct: 166 AHGHNFV------KTILRLAQSHERLRVVVDQIGCPTPARDMAEAIMHIAGQLLAGKQDG 219
Query: 240 QLLLNVGGPDRVSRVQMAEV 259
+ G VSR++ A
Sbjct: 220 FGTFHYCGAGPVSRLEFARA 239
>gi|253999153|ref|YP_003051216.1| dTDP-4-dehydrorhamnose reductase [Methylovorus glucosetrophus
SIP3-4]
gi|253985832|gb|ACT50689.1| dTDP-4-dehydrorhamnose reductase [Methylovorus glucosetrophus
SIP3-4]
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E +PD A +IN + + L+ ++H STD V++G
Sbjct: 53 RPDVIVNPAAYTAVDKAETEPDLAYAINAEAPRI--LAEEAAELGARMVHYSTDYVFDGR 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D P+ VYG SK+A EK + + ILR+S +YG K+ +
Sbjct: 111 ASKPYRETDMTNPLGVYGASKLAGEKAVQQAGQQHLILRTSWVYG-----AYGKNF-LHT 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + + + + D+ P D+ L L W E + L N G
Sbjct: 165 ILRLARERDSLGIVADQFGAPTSSHDIASATLTLLKSWQPELSGIYHLTNSG 216
>gi|85103557|ref|XP_961543.1| hypothetical protein NCU01177 [Neurospora crassa OR74A]
gi|18376291|emb|CAD21404.1| related to methionine adenosyltransferase regulatory beta subunit
[Neurospora crassa]
gi|28923090|gb|EAA32307.1| hypothetical protein NCU01177 [Neurospora crassa OR74A]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 24/273 (8%)
Query: 4 KRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K LV G TG LG+ ++ QGLS P +V++ T + + VD
Sbjct: 10 KTALVTGATGLLGRQVVRAFQGLS----VPTEVSSKAGWTWEVKGTGFSRADGVNVLKVD 65
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+ + V L P V+V+CAA P + DP+ +NV ++ L+ ++
Sbjct: 66 LEKAEEVERV-LGDVSPQVLVHCAANRFPDKVDADPEGTRLLNVEATRT--LARACASRG 122
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S + ++
Sbjct: 123 ILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKASKEGLGVVM 182
Query: 173 RSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
R ++YG +S +D+VL +G+KV+ H R P DV ++ +
Sbjct: 183 RVPVLYGKTEEGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRVCRDVAV 242
Query: 231 RWLS----EDKQMQLLLNVGGPDRVSRVQMAEV 259
++LS E + +L G ++ ++ +M ++
Sbjct: 243 KYLSTSEAERTSLPRILQFSGEEQYTKYEMCQL 275
>gi|383762265|ref|YP_005441247.1| dTDP-4-dehydrorhamnose reductase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382533|dbj|BAL99349.1| dTDP-4-dehydrorhamnose reductase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 295
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PDVV+N AA + E++PD+A ++N +L+ E L+H+ST++V+ G
Sbjct: 63 PDVVINAAAWTNVDAAESNPDAAYAVNALGP--KYLAEGCEQCGAALVHVSTNEVFAGQP 120
Query: 137 S-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
FY+E D +VY +SK+A E+ + C F I+R + ++GP + P + I
Sbjct: 121 GRFYREYDACEASSVYARSKLAGERAVMALCRRFYIVRVAWLFGPGG-----ANFPSKII 175
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNR 231
+ +G + DE P Y D I+ L TNR
Sbjct: 176 AAADQRG-ALRVVADEFGNPTYAPDAALAIVRLIRTNR 212
>gi|239813762|ref|YP_002942672.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110]
gi|239800339|gb|ACS17406.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110]
Length = 296
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++P+ A +N S V ++ + L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPEFARKLNATSPGV--VAEAAQQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H STD V++G S +KE+D P++VYG++K+ E+ + C+ I R+S +Y +
Sbjct: 101 HYSTDYVFDGSGSTPWKEDDATGPLSVYGRTKLEGEQLVARHCAKHLIFRTSWVYAAR 158
>gi|336315308|ref|ZP_08570219.1| dTDP-4-dehydrorhamnose reductase [Rheinheimera sp. A13L]
gi|335880285|gb|EGM78173.1| dTDP-4-dehydrorhamnose reductase [Rheinheimera sp. A13L]
Length = 294
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 40/233 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ +VLV G G +G L+Q L+ GK ++ AT S +D
Sbjct: 1 MNHLKVLVTGSNGQVGHQLVQRLT---GK-VELLATDRSV------------------LD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ + + +KF QPDV++N AA + E + ++A +IN L + + NK
Sbjct: 39 ISNQQQVEDFVMKF-QPDVIINAAAYTAVDKAEIETEAANAIN---HLGSKYLAIAANKV 94
Query: 121 NL-LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
N L+H+STD V+ G + S Y E+D P VYGK+K+ E + E C + I+R++ ++
Sbjct: 95 NAALLHISTDYVFSGHENSIYNEKDPTGPNGVYGKTKLDGEAAVAEHCPHHIIMRTAWVF 154
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILAL 228
G + ++ ++L G+ ++ D+ P Y D+ ++++
Sbjct: 155 GEHGNN---------FVKTMLRLGQTRPELGIVADQFGGPTYAGDIADALISI 198
>gi|407712849|ref|YP_006833414.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
gi|407235033|gb|AFT85232.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ G+P + V T S P P ++ +D++
Sbjct: 3 KVAVMGASGLLGRAIVD---ELAGQPDWQVVGTAFSRPTPNTVV-----------LDVRE 48
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + PD +V AA P VCE P+ A ++NV + ++ L
Sbjct: 49 ARAIEQF-IDREAPDALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLS 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
I STD V++G + Y+ + E AP+N YG+SK+ E+ + +LR ++YGP
Sbjct: 108 I--STDYVFDGTRPPYRPDSEPAPLNAYGRSKLDGERALAAATDFGCVLRLPLLYGP 162
>gi|53804350|ref|YP_113747.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str.
Bath]
gi|53758111|gb|AAU92402.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str.
Bath]
Length = 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G A ++ +PD++VN AA + E +PD A +N + V L++ LIH
Sbjct: 43 GAVAALVRAVRPDLIVNAAAYTAVDRAEQEPDLAWKVNAEAPAV--LAAEATRLGIGLIH 100
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
STD V+ G + Y+E+D + P NVYG+SK+A E+ I + ILR++ +YG + +
Sbjct: 101 YSTDYVFPGDGAVPYREDDPVGPRNVYGRSKLAGEQAIAASGAAHLILRTAWVYGVRGQN 160
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
+ L ++++ E V D+ P +VR + +
Sbjct: 161 FLRTML------RLMAEREVVRVIDDQFGAPTWVRMIAE 193
>gi|254478581|ref|ZP_05091955.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM
12653]
gi|214035510|gb|EEB76210.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM
12653]
Length = 298
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 27/183 (14%)
Query: 5 RVLVVGGTGYLGQHLL----QGLSEI-EGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV 59
R+L+ G G L L +G SEI E P A T +L + L F D
Sbjct: 2 RLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFIDE 61
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTE 117
+PD+++NCAA + CE+D D+A +N P +L + +
Sbjct: 62 ---------------YKPDIIINCAAYTNVDKCESDVDAAFKVNAIGPRNL----AMAAQ 102
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
L+H++TD V+ G + ++E D P+NVYGK+K+ E+++ E C + I+R++
Sbjct: 103 RVGAKLLHIATDYVFNGTGNVPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAW 162
Query: 177 IYG 179
+YG
Sbjct: 163 LYG 165
>gi|120555541|ref|YP_959892.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8]
gi|120325390|gb|ABM19705.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8]
Length = 295
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 128/324 (39%), Gaps = 67/324 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G LL+ L+ PL Q++ D DL S
Sbjct: 2 KILVTGSDGQVGHELLKTLA----------------PLGQVI------GVTRKDADLASE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
A+ L PDVVVN AA + E + D+A ++N P + W + + L
Sbjct: 40 KEVAAL-LARHNPDVVVNPAAYTAVDKAETEQDAAYALNERAPELMAAWCHA----QNRL 94
Query: 123 LIHLSTDQVYEGVKSFYK-EEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
L+H STD VY G + E P +VYGKSK+A ++ + + I R+S +YG
Sbjct: 95 LVHYSTDYVYPGTGDAAQMETTPTGPASVYGKSKLAGDEAVLREAPEALIFRTSWVYGAR 154
Query: 181 -----------------------QTISPVPKSLPIQWI-----DSVLSKGEKVEFFHDEC 212
Q +P P L Q + + + + FH C
Sbjct: 155 GRNFMLTMLKLAAEKSRLTVVADQVGAPTPAWLIAQVTAIAVRERLAGRADISGVFHLTC 214
Query: 213 RCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMD 272
R D + I+A R S + + + N +V + + PA+ +D
Sbjct: 215 RGAASWCDFAREIVA---RARSAGRTLAMDEN-----QVYPIPTTDYPAPAPRPANSRLD 266
Query: 273 ITKLVQTLNIDPVTYKDGVKLTLA 296
+++L Q L + ++ + +TLA
Sbjct: 267 VSRLEQALGLTLPQWQSALSITLA 290
>gi|374849502|dbj|BAL52516.1| dTDP-4-dehydrorhamnose reductase [uncultured Bacteroidetes
bacterium]
Length = 303
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 24/240 (10%)
Query: 67 FDA--VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
FD ALK +P+ ++N + CE D A +NV P L +F +
Sbjct: 56 FDGYKTALKEFKPNAIINTIGYTDVDGCETDRALAQMLNVRFPEMLARVARTFDVH---- 111
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
L+H STD V++G Y E P+N YGK+K+A E I I+R++++YG
Sbjct: 112 LVHYSTDYVFDGSAGPYDETQLPNPINYYGKTKLAGENAIRSTGCAATIIRTNVVYG--- 168
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL 242
KS ++W+ ++ + D+ P Y D LAL E ++ L
Sbjct: 169 FGGTSKSDFVEWVIRSVTANIPIRAAVDQFSNPTYSGD-----LALATAKFVE-RRRSGL 222
Query: 243 LNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNID---PVTYKDGVKLTLAAEA 299
++GG D SR A R + D+ D+ + V T + P + G+ ++L AEA
Sbjct: 223 YHIGGADYCSRYDFA---RAIARAFDLRPDLIEPVTTQQLQQKAPRPLRAGL-ISLLAEA 278
>gi|331086196|ref|ZP_08335278.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406355|gb|EGG85869.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L+ G G LG+ L Q A H P QL+ + D+D+ +
Sbjct: 2 KKILITGCNGQLGRALNQ-----------FYAKH---PDIQLINTDVE------DLDIAN 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKEN 121
+ K PD+++NCAA + CE + + A INV P +L S +
Sbjct: 42 ANEVMEYVSKI-HPDIIINCAAYTNVDDCEKNQELAYRINVDGPKNL----SVASNEVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+L+H+S+D VY+G K Y EED+ AP +VYG +K+ + ++ E + I+R++ +YG
Sbjct: 97 VLVHISSDYVYDGRKKEPYLEEDDYAPQSVYGMTKMKGDAYVTEIAHKYFIVRTAWLYGE 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
K+ P+ + + K +++ D+ P +VVK+I
Sbjct: 157 ------GKNFPLTML-KLAEKRKQIAVVMDQIGSPTSAYEVVKVI 194
>gi|255020602|ref|ZP_05292665.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC
51756]
gi|340781131|ref|YP_004747738.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus SM-1]
gi|254969987|gb|EET27486.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC
51756]
gi|340555284|gb|AEK57038.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus SM-1]
Length = 302
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
S+KRVLV G G +G+ L Q + P +V DA+ DV
Sbjct: 10 SRKRVLVTGAGGQVGRALAQTV------PAEV--------------DAVFLHRQALDV-- 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENK 119
+ +G A AL +P V++N AA + E++ D A +IN P+ L
Sbjct: 48 -ADAGSVAKALAAHRPQVIINAAAYTAVDRAESEADQAYAINAQGPAHLARAARELGAE- 105
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSII 177
L+H+STD V+ G + Y+ ED AP+N YG SKVA E+ I A ILR+S +
Sbjct: 106 ---LLHISTDFVFSGSQGQPYRPEDPTAPINAYGASKVAGEEAIAAILGEQALILRTSWV 162
Query: 178 YGP 180
Y P
Sbjct: 163 YAP 165
>gi|254168139|ref|ZP_04874986.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
gi|197622905|gb|EDY35473.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469]
Length = 284
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V ++G G LG L++ E + PL LD
Sbjct: 2 KVAIIGANGQLGSDLVEIFGE------------RAVPLTHNDLDV--------------- 34
Query: 65 SGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ +D++ LK P+V++N AA E +P A ++N +L +++ + +
Sbjct: 35 TNYDSLKILKKIDPNVIINTAAYVRVDDAEKEPKKAFNVNAIGAL--YVAKIANELDAIN 92
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y EED P+NVYG SK E F + ++R + +YG +
Sbjct: 93 VYISTDYVFDGRKGAPYTEEDMPNPINVYGASKYMGEIFTRNYSKKYYVVRVASLYGKKG 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + WI GE+++ D P Y RDV K + L
Sbjct: 153 ARGKGGNF-VNWIIEKAKGGEEIKVVDDIIMSPTYTRDVAKTLKKL 197
>gi|261868368|ref|YP_003256290.1| hypothetical protein D11S_1708 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415759782|ref|ZP_11481829.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|261413700|gb|ACX83071.1| hypothetical protein D11S_1708 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348654960|gb|EGY70458.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 294
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 55/314 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G LG+ L + L ++ Y+V A S LD VF +D
Sbjct: 3 RLLITGAGGQLGRSLAKLL--VDNGRYEVLALDFSE------LDITNKDMVFSIID---- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
F +P+V++N AA + E + SA S+NV V +L+ + ++
Sbjct: 51 --------SF-KPNVIINAAAYTSVDQAELEVSSAYSVNVRG--VQYLAEAAIRHNSAIL 99
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G KS YKE D I P+ VYGKSK E+ + ILR+S +G
Sbjct: 100 HVSTDYVFDGYKSGKYKETDIIHPLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL-SEDKQMQLL 242
+ V L + +L D+ P Y D+ +++ + + + E + +
Sbjct: 160 NFVKTMLRLAKNRDILG------VVADQIGGPTYSGDIASVLIQIAEKIIVGETVKYGIY 213
Query: 243 LNVGGP------------------------DRVSRVQMAEVDRGVQSPADISMDITKLVQ 278
G P V+ + A+ + PA+ +D+TK+ Q
Sbjct: 214 HFTGEPCVSWYDFAIAIFDEAVAQKVLEDVPLVNAITTADYPTLAKRPANSCLDLTKIQQ 273
Query: 279 TLNIDPVTYKDGVK 292
I P ++ +K
Sbjct: 274 AFGIQPSDWQRALK 287
>gi|409044928|gb|EKM54409.1| hypothetical protein PHACADRAFT_258235, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 252
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 28/260 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G +G LG + +V HS P L + +DL G
Sbjct: 2 RVIVTGASGVLGAAVYNAFKASPKN--EVLGLAHSRPRDGLKV-----------LDLLEG 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENL 122
+ V +F +PD V++CAA P V E +P+ A +N VP++L ++ ++ +
Sbjct: 49 EQVEKVFAEF-KPDWVIHCAAERRPDVAEKNPEGAQKLNADVPANL----AALAKSLKFT 103
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQ 181
L+++STD VY+G Y P+N+YG++K E + + +LR ++YGP
Sbjct: 104 LVYISTDYVYDGTHPPYPPSAPTNPLNLYGRTKRDGEFAVLGVTGAKTIVLRVPVLYGP- 162
Query: 182 TISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
+P + + ++S G+ + H R P V D+ ++ LT+ L K +
Sbjct: 163 --APNNSDTAVNILIDIVSDQSGKTYKMDHYATRYPTNVLDIADFLVRLTS--LPPTKAI 218
Query: 240 QLLLNVGGPDRVSRVQMAEV 259
+L+ + ++ +M V
Sbjct: 219 PPILHYSAEEPFTKYEMCLV 238
>gi|345017161|ref|YP_004819514.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032504|gb|AEM78230.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D +A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDKCESDIGTAFKVNAIGPRNL----AMAAQRVGAKLLHVSTDYVFN 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
GV + ++E D P+NVYGK+K+ E+++ E C+ + I+R++ +YG
Sbjct: 119 GVGNVPFREYDIPEPINVYGKTKLLGEQYVREFCNRYFIVRTAWLYG 165
>gi|292492258|ref|YP_003527697.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4]
gi|291580853|gb|ADE15310.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLSTDQVYE 133
QP ++VN AA + E +P+ AM+IN VP L + + LIH STD V++
Sbjct: 55 QPILIVNAAAYTAVDQAEEEPERAMAINGDVPGIL----AEAARQQGAALIHYSTDYVFD 110
Query: 134 GVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
G S Y+E D P+NVYG++K+A EK I + ILR+S +YG
Sbjct: 111 GENTSPYRETDTPRPLNVYGQTKLAGEKAIAAVGGAYLILRTSWVYG 157
>gi|78060715|ref|YP_367290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383]
gi|77965265|gb|ABB06646.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383]
Length = 314
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 18/241 (7%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M +L++G G LG+ + L+ E VA + L P + DV
Sbjct: 1 MPHPTILLIGAAGLLGRAVAASLAR-ESSLNLVATIRNPQGAGAKRLALPPENLAELDV- 58
Query: 61 LKSGSGFDAVALKF----GQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
D AL+ QP V+ CAA P VCE DP A +INV + + +
Sbjct: 59 ------LDEPALEHLFATRQPAAVIICAAERRPDVCERDPAGARAINVTAQ--ARIGALA 110
Query: 117 ENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR +
Sbjct: 111 ARYGAWTLGISTDYVFDGKAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLSCVLRLPL 170
Query: 177 IYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
++GP + S V +P + S + V R P Y DV +I LT R L
Sbjct: 171 LFGPIVDWSESAVTSLVP-AIVASARPGADAVGMDAWAIRYPTYTPDVADVIRDLTLRHL 229
Query: 234 S 234
+
Sbjct: 230 A 230
>gi|94264208|ref|ZP_01288004.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1]
gi|93455383|gb|EAT05584.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1]
Length = 290
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
RVL+ G G LG+ L L P +A ++D+
Sbjct: 2 NRVLITGAGGQLGRELAARLG-----PEQLAVGRQ-------------------ELDIVD 37
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
G A K P VVNCAA + E++P+ A +N VN L+ E+ + L
Sbjct: 38 GLAVKAF-FKAHHPVAVVNCAAYTAVDRAESEPEDAFLVN-EQGAVN-LAMAAESLDIPL 94
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V+ G KS Y E D AP++VYG+SK+A E+ + C ++R+ +Y
Sbjct: 95 IHISTDFVFAGRKSSPYVESDRPAPLSVYGRSKLAGERGVLAACPRSLVIRTGWLYAVHG 154
Query: 183 ISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILA-LTNRWLSEDKQ 238
+ ++++VL ++ D+ P Y D+ +I L R L +K+
Sbjct: 155 RN---------FVNTVLYYARERGQLRVVADQVGSPTYTGDLAAVIAKILAARGLDGNKR 205
Query: 239 M 239
M
Sbjct: 206 M 206
>gi|425896972|ref|ZP_18873563.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397884258|gb|EJL00744.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 289
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + +++PD A +IN + V F E L LIH STD V+
Sbjct: 50 RPQLIINAAAHTAVDQAQSEPDLAFAINASAPEV-----FAEEARELGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K Y E+DE P++VYG+SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKQAPYTEDDEPNPLSVYGQSKLAGERAIGAAGGEHLILRTSWVY-----SNTGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ + +L + + D+ P + + AL RW
Sbjct: 160 LT-MQRLLQEKPHLRVVADQIGAPTWAGTIAASTAALIERW 199
>gi|409122713|ref|ZP_11222108.1| dTDP-4-dehydrorhamnose reductase [Gillisia sp. CBA3202]
Length = 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G +G LG+ LQ L+E + + L +D+ ++D+ S
Sbjct: 2 KTVLVTGASGQLGK-CLQKLAE------------NQHEIDWLFMDSS-------EIDITS 41
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + Q D +NCAA + E++ + A SIN + V L+ + +L
Sbjct: 42 SCDLE-MCFSSKQIDYCINCAAYTNVEKAESEKEKAFSINAEA--VKNLAEICRKHKTVL 98
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH+STD V++G S Y EED+ P+NVYG SK+ E+ I I R+S +Y
Sbjct: 99 IHISTDYVFDGTSNSPYIEEDDTNPINVYGASKLMGEQHIQTTIGYHFIFRTSWLY 154
>gi|406916406|gb|EKD55423.1| dTDP-4-dehydrorhamnose reductase [uncultured bacterium]
Length = 292
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 82/190 (43%), Gaps = 15/190 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV+GG G LG LL+ L K +DV T D H +F+VD++
Sbjct: 2 RILVMGGDGMLGHQLLESLQ----KNHDVRITVRQGAKAYQEYDLFNHESSYFNVDVRQD 57
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V F +P V+N + R ND S + IN + + LS E LI
Sbjct: 58 ENIIPVLEHF-KPHAVINAVGVIKQRQIGNDAISNIEIN--ALFPHRLSHLCETAHARLI 114
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V+ G K Y E D + YGKSK E S+ LR+S+I +
Sbjct: 115 HFSTDCVFSGKKGKYTENDISDATDFYGKSKFLGEV----AASHCLTLRTSVI----GLE 166
Query: 185 PVPKSLPIQW 194
K+ I+W
Sbjct: 167 LARKASLIEW 176
>gi|431793469|ref|YP_007220374.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783695|gb|AGA68978.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 287
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
LK QPD+V N AA + CE+ PD A +N + L+ L+H+STD V
Sbjct: 47 LKALQPDLVFNAAAYTNVDECESKPDLAYQVNCLG--IRNLAIIANELNAALVHISTDYV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G + Y+E D + P +VYGKSK+ E + + C I+R++ ++G + V L
Sbjct: 105 FGGQGNKPYREYDPVNPRSVYGKSKLDGELMVRQHCRRHYIVRTAWLFGYYGNNFVRTML 164
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ + E + +D+ P Y RD+ K I L ++
Sbjct: 165 RLA------KEQEYLRVVNDQRGSPTYTRDLAKAIADLVDK 199
>gi|393760545|ref|ZP_10349354.1| dTDP-4-dehydrorhamnose reductase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161280|gb|EJC61345.1| dTDP-4-dehydrorhamnose reductase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 301
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG G LGQ L Q ATH L L +L H ++D+
Sbjct: 3 RILISGGHGQLGQALTQ------------QATH-------LHLISLGHQ----ELDVTQR 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + AL Q D+V+N AA + E D + A +N + ++S + ++
Sbjct: 40 ACLER-ALDRHQADIVINAAAYTAVDNAETDVERAYRVNAIAP--GLMASVCAERGIQML 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V++G+ + Y E+ P++VYG SK E+ + + ILR+S ++ P
Sbjct: 97 HLSTDYVFDGLAAQPYAEDAPTNPISVYGHSKREGEQAVLRALPSALILRTSRVFSPFGN 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ + + L + S LS D+ P Y + +I+L L R L+
Sbjct: 157 NFLTRLLTLAQERSELS------LVDDQTSGPTYAPHLARIVLQLAERLLA 201
>gi|428216893|ref|YP_007101358.1| dTDP-4-dehydrorhamnose reductase [Pseudanabaena sp. PCC 7367]
gi|427988675|gb|AFY68930.1| dTDP-4-dehydrorhamnose reductase [Pseudanabaena sp. PCC 7367]
Length = 303
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 48/265 (18%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A+K QPD+++N AA + E++P+ AM IN + + +++ + +IH STD
Sbjct: 46 AIKEIQPDLIINPAAYTAVDKAESEPELAMQINGIAPGI--MAAEAKKLGATMIHYSTDY 103
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K Y E D P+ VYGK+K+A E I + + ILR+ +YG + K+
Sbjct: 104 VFDGSKDGAYVETDPTNPLGVYGKTKLAGEAAIAQSGAAHLILRTCWVYG-----RIGKN 158
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-----------------ALTNRW 232
I + + + E++ D+ P + R + + +LTN W
Sbjct: 159 FMITML-RLFRQKEELRVVADQLGTPTWSRLIAQTTAHIITQAISSSASGSPTPSLTN-W 216
Query: 233 LSEDKQMQLLLNVGGP------------DRVSRVQM---------AEVDRGVQSPADISM 271
++ + L G DR + Q+ +E + PA+ +
Sbjct: 217 FTDRGGVYHLTAAGSTSWHGFAKAIMVGDRQAEQQIIKAIQPISTSEYPTPAKRPANSQL 276
Query: 272 DITKLVQTLNIDPVTYKDGVKLTLA 296
D TKL T NI+ T+++ + + LA
Sbjct: 277 DPTKLCDTFNINLPTWEECLAMVLA 301
>gi|319791461|ref|YP_004153101.1| dtdp-4-dehydrorhamnose reductase [Variovorax paradoxus EPS]
gi|315593924|gb|ADU34990.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus EPS]
Length = 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 22/175 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL +L+ AL F+ D
Sbjct: 2 KLLLLGKGGQVGWELQRSLA----------------PLGELV--ALDFDSTDFNADFSRP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
LK +PDV+VN AA + E++PD A +N S V ++ + L++
Sbjct: 44 EQLAETVLKV-RPDVIVNAAAHTAVDKAESEPDFARKLNATSPGV--VAEAAQQIGALMV 100
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
H STD V++G S +KE+D P+++YG +K+ E+ + + C+ I R+S +Y
Sbjct: 101 HYSTDYVFDGSGSKPWKEDDATGPLSIYGSTKLEGEQLVAKHCARHLIFRTSWVY 155
>gi|408491199|ref|YP_006867568.1| dTDP-4-dehydrorhamnose reductase RfdB [Psychroflexus torquis ATCC
700755]
gi|408468474|gb|AFU68818.1| dTDP-4-dehydrorhamnose reductase RfdB [Psychroflexus torquis ATCC
700755]
Length = 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD VNCAA + E++ +SA +N + V+ L+ E + LIH+STD V++G+
Sbjct: 52 RPDFCVNCAAYTNVEGAEDNENSAFQVNAEA--VHKLAKLCEKFKTKLIHISTDYVFDGL 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E D+ P+NVYG SK E I + + +LR+S +Y +
Sbjct: 110 KNRPYHESDKENPINVYGASKFQGETHITSTMNTYFMLRTSWLYS---------EFGHNF 160
Query: 195 IDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILAL 228
+++L K + ++ P D+ K IL L
Sbjct: 161 FNTILKKAASQHPLNITTEQIGTPTNANDLAKFILHL 197
>gi|257053212|ref|YP_003131045.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940]
gi|256691975|gb|ACV12312.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940]
Length = 297
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +PD V+NCAA++ CE A IN + ++S + L+H+STD V
Sbjct: 57 LEERRPDAVINCAAMTDVDACETASGVAHEINAEAP--GQIASACAERAIPLVHVSTDYV 114
Query: 132 YEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G + Y E P+ VYG+SK E + E + I+R S IYG S
Sbjct: 115 FDGDTDTPYTESATPNPIQVYGESKRDGEVRVRESEAETIIVRPSFIYGVHRASGELTGF 174
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
P W+ L+ GE F D+ P ILAL
Sbjct: 175 P-AWVRDRLAAGESTPLFTDQWVTPSRAGATASTILAL 211
>gi|406927136|gb|EKD63212.1| hypothetical protein ACD_51C00316G0007 [uncultured bacterium]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 146/317 (46%), Gaps = 49/317 (15%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M + ++L+ GG+G++G +L+ L ++ + +++A + + LD + D
Sbjct: 1 MQESKILITGGSGFIGTNLIIELQKLGFEIVNLSAHDPIVSVKTIKLDLINDDLSVLD-- 58
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+F D VV+ AA+S ++ E + + +NV + L F +
Sbjct: 59 ----------EYRF---DYVVHLAAVSTIKLAEGNEQETIRLNVEGT-KKLLEYFKDKNL 104
Query: 121 NLLIHLSTDQVYEGVKSFYKEE-DEIA--PVNVYGKSKVAAEKFIYEKCSNFA------I 171
I +S+ VY+ V + E+ D + N Y SK+ AEK +C FA I
Sbjct: 105 KKFIFMSSMTVYQEVDTEMTEDLDALVDKKSNAYSYSKLLAEK----ECEKFAKKMPILI 160
Query: 172 LRSSIIYGP-QTISPVPKSLPIQWIDSVLSKGEKVEFFH-DECRCPVYVRDVVKIILALT 229
R + YGP Q I VP +P Q I ++ K+E ++ D R +YV DVV I+
Sbjct: 161 FRLANAYGPYQRIGKVPTLIP-QIISQAIAG--KIEIYNGDFARDFIYVTDVVNAIM--- 214
Query: 230 NRWLSEDKQMQLLLNVGGPDRVSR----------VQMAEVDRGVQSPADISMDITKLVQT 279
+ L D L L G P +V V+++++ + + +P ++ ++ ++ +T
Sbjct: 215 -KGLKSDFTGTLNLGTGKPTKVMEIAKTVANIFGVEVSDLRKKINAPLELVPNVVRIKET 273
Query: 280 LNIDP-VTYKDGVKLTL 295
L P ++ ++G+K T+
Sbjct: 274 LKWKPEISLEEGIKNTI 290
>gi|340546009|gb|AEK51803.1| methionine adenosyltransferase II beta [Ichthyophis bannanicus]
Length = 211
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP ++V+CAA P V + P++A +NV S ++ LI++STD V++G
Sbjct: 37 QPHLIVHCAAERRPDVVDRLPEAAFQLNVVVS--EKIAKEAARIGAFLIYISTDYVFDGT 94
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y E P+N+YGK K EK + + A+LR I+YG + + +S
Sbjct: 95 SPPYSESSVPHPLNLYGKLKFEGEKVVLQNYEGAAVLRVPILYG--DVERLEESAVTILF 152
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQ 255
D+V + H + R P +V+DV + L + L +D ++ + + G +++++ +
Sbjct: 153 DNVQFSNKPANMDHWQQRFPTHVKDVASVCRQLAEKRL-QDSSVKGIFHWSGXEQMTKYE 211
>gi|333924766|ref|YP_004498346.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750327|gb|AEF95434.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 285
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL-LIHLSTDQVY 132
+PD+++NCAA ++ CE + + A +N P +L + N++N+ L+ +STD V+
Sbjct: 50 RPDIIINCAAYTLVDKCEEEIELAYRVNALGPRNL-----AVICNEQNIPLVQISTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E+D P+++YGKSK AE +I + F I+R+S ++G + V L
Sbjct: 105 DGTKGANYLEDDIKNPLSIYGKSKSLAEDYITALTNKFYIVRTSWLFGENGNNFVKTMLQ 164
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I + + +D+ P Y RD+ + I L
Sbjct: 165 IG------KTRDSITVVNDQFGSPTYTRDLAQAIACL 195
>gi|423061921|ref|ZP_17050711.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
gi|406716494|gb|EKD11643.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis C1]
Length = 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 KPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+ ++L G E+++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGGEREELKVVMDQVGTPTWTGDLATAIVRLIPQLNSETSGIYHYTNSG 214
>gi|443705204|gb|ELU01859.1| hypothetical protein CAPTEDRAFT_100199 [Capitella teleta]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 23/258 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV 59
M++ RVL+ G +G LG+ + +E + P ++ S +L V
Sbjct: 1 MTQTRVLITGASGLLGRAVY---AEFKRNPAWEALGLAFSRANEELR-----------RV 46
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL S V +F +P V+++ AA P V E+ P++A +NV ++ + ++
Sbjct: 47 DLGSEEEIGRVIQEF-KPQVIIHSAAEKRPNVVESQPEAAKRLNVDATA--HVCNYAAKV 103
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+I++STD V+EG+K +K +D P+N YGK K+ EK + ILR I+YG
Sbjct: 104 GAFVIYISTDYVFEGIKPPHKPDDPTNPLNAYGKWKLEGEKAAMLQHEGNLILRVPILYG 163
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHD-ECRCPVYVRDVVKIILALTNRWLSEDKQ 238
I +S I ++ ++ K D E R P + DV ++ + + L D
Sbjct: 164 --DIESFGESA-ITYMFPMVKDSTKEFLVSDYEKRYPTHCADVAVVLRQMAEKKLQND-S 219
Query: 239 MQLLLNVGGPDRVSRVQM 256
+ + G + +++ M
Sbjct: 220 FDGIFHWSGAEEMTKYDM 237
>gi|300114907|ref|YP_003761482.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113]
gi|299540844|gb|ADJ29161.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113]
Length = 294
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP ++VN AA + E +P+ A++IN + V L+ + LIH STD V++G
Sbjct: 55 QPTLIVNAAAYTAVDKAEEEPEQALAINGKAPGV--LAETARQQGAALIHYSTDYVFDGQ 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ Y+E D P+NVYG++K+A E+ I + ILR+S +YG
Sbjct: 113 GVYPYREGDTPRPLNVYGQTKLAGEQAIAAVGGAYLILRTSWVYG 157
>gi|220909659|ref|YP_002484970.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
gi|219866270|gb|ACL46609.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 2 SKKRVLVVGGTGYLG---QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S+ ++L++G G +G QH+L SE+ H LP L+ +
Sbjct: 7 SQPKILLLGSQGQVGAELQHILSSASELMALSRAQLDLAHPQRLPDLIAEI--------- 57
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFT 116
QP V++N AA + E++P+ A +N VP+ L +
Sbjct: 58 -----------------QPQVIINAAAYTAVDRAESEPEVAEIVNAKVPTEL----AIAA 96
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
LL+HLSTD V+ G +S Y+E D AP++VYG++K+A E+ I + ILR++
Sbjct: 97 RQCNALLVHLSTDYVFAGQQSTPYRETDPTAPLSVYGQTKLAGEEGIRQVWDRHLILRTA 156
Query: 176 IIYG 179
+YG
Sbjct: 157 WVYG 160
>gi|163859122|ref|YP_001633420.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii DSM 12804]
gi|163262850|emb|CAP45153.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii]
Length = 323
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL + G A+ L+ PD++VN AA + ENDP A +N + V L++
Sbjct: 54 ADLANLDGLRAL-LQAQVPDLIVNAAACTAVDQAENDPAPARRVNAEAVAV--LAAHARK 110
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LL+H STD V++G K Y E D P+N YG+SK+A E+ I +LR+S +
Sbjct: 111 SGALLVHYSTDYVFDGAKQTPYLETDAPHPLNEYGRSKLAGEQAIAASGCRALVLRTSWV 170
Query: 178 Y 178
Y
Sbjct: 171 Y 171
>gi|404494262|ref|YP_006718368.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380]
gi|77546270|gb|ABA89832.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380]
Length = 314
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV +VG G L + +L+ +D+ A H PQ FD+ +
Sbjct: 5 KRRVAIVGARGMLARMVLRSAPS----EWDIVALSH----PQ------------FDLTDR 44
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ + A QPDV++NCAA + E++ A S+N P + L+ +
Sbjct: 45 ASARMGLSAF---QPDVIINCAAYTDVDGAESNEALAFSVNAVGPGN----LAQVAKELN 97
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEK-CSNFAILRSSIIY 178
L+H S+D V+ G K+ Y+E D P ++YGKSK+ E+ I + F I+R+S +Y
Sbjct: 98 ATLVHFSSDYVFGGDKTAPYRETDCPDPRSIYGKSKLQGEQLIQDSGLERFFIVRTSWLY 157
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
GP + V + + + E++ D+ P Y D+ + L L
Sbjct: 158 GPGGKNFVESMI------RLAQQREELRIVADQFGSPTYTADLTQAALNL 201
>gi|338974808|ref|ZP_08630164.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231903|gb|EGP07037.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 305
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 9/119 (7%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
++ QP +VVN AA + E +P A IN + V L+ T L+H STD V
Sbjct: 51 IRHHQPAIVVNTAAYTAVDKAETEPAKAYRIN--ETAVRLLAEETSRLGAWLVHYSTDYV 108
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG------PQTI 183
++G K S Y E+DE P+NVYG+SK A E+ I E I+RS +Y P+TI
Sbjct: 109 FDGEKASPYTEDDEPHPLNVYGQSKAAGERAIRETGCKHLIIRSGWLYSVHGSNFPRTI 167
>gi|190150742|ref|YP_001969267.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307250738|ref|ZP_07532672.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307264144|ref|ZP_07545738.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915873|gb|ACE62125.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306857242|gb|EFM89364.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306870518|gb|EFN02268.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 291
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 34/243 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA + E++ + + +INV +L+ + +++H+STD V+EG
Sbjct: 51 RPDVIINAAAHTAVDRAESEVELSEAINVKGP--QYLAEAANEVDAIILHISTDYVFEGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S YKE DE P VYGK+K+A E + + ILR++ ++G + V L +
Sbjct: 109 GSGEYKENDEPNPQGVYGKTKLAGEIAVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGK 168
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
VL D+ P Y D+ K ++ + N + + + + G VS
Sbjct: 169 ERDVLG------IVSDQFGGPTYAGDIAKALIQIANAIMGGRTDVFGIYHFTGKPYVSWA 222
Query: 255 QMAEV--DRGV-----------------------QSPADISMDITKLVQTLNIDPVTYKD 289
A D V + PA+ +D+TK+ I P ++
Sbjct: 223 DFANAIFDEAVLQKVIEKAPLVNFISTSDYPTPAKRPANSRLDLTKIDIVFGIKPSNWQQ 282
Query: 290 GVK 292
+K
Sbjct: 283 ALK 285
>gi|51246074|ref|YP_065958.1| dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54]
gi|50877111|emb|CAG36951.1| probable dTDP-4-rhamnose reductase [Desulfotalea psychrophila
LSv54]
Length = 298
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 65/319 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+LV G G +G+ L + LS GK ++ T+ S LD V LK+
Sbjct: 2 RILVTGSGGQVGKCLCRQLS---GK-VELLTTNRSE------LDITCQKAV-----LKTV 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+GF QPD+++N + + E + + A +N + +L L+
Sbjct: 47 TGF--------QPDIIINATGYTAVDLAEENSEEAYRVNQDGA--KFLGQAATAVGAALL 96
Query: 125 HLSTDQVYEGVKSF---YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H+STD V+ G KS Y E +E P+ VYGKSK+A EK + C ILR+S ++
Sbjct: 97 HISTDYVFSGEKSRDESYSEGEEPGPLGVYGKSKLAGEKAVANTCKRHIILRTSWVF--- 153
Query: 182 TISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVKIILALTNRWLSED-K 237
++ ++++ G+K + D+ P Y D+ ++ + + E+
Sbjct: 154 ------SEYGRNFVKTMIALGQKHDSLSIVSDQYGGPTYAGDIASALITIAEKISDENFC 207
Query: 238 QMQLLLNVGGP----DRVSRVQMAEVDRG--------------------VQSPADISMDI 273
Q L G P ++V +E +R + P + +D
Sbjct: 208 QWGLYHFAGQPFMNWSGFAKVIFSEAERENLLPAEPVINNVSSEQYPSLAKRPGNSQLDT 267
Query: 274 TKLVQTLNIDPVTYKDGVK 292
+KL I P ++ ++
Sbjct: 268 SKLTAQFGISPSDWQQALR 286
>gi|225376962|ref|ZP_03754183.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM
16841]
gi|225211283|gb|EEG93637.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM
16841]
Length = 307
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 17/138 (12%)
Query: 55 VFFDVDLKSGSGFDAVAL----------KFGQPDVVVNCAALSVPRVCENDPDSAMSINV 104
F + D+ G G A+ + + QP+V++NCAA + CE D+A IN
Sbjct: 44 TFINTDVAEGEGVTALDITKIEQVLSLVRAEQPEVIINCAAHTNVDACEKQWDAAYRINA 103
Query: 105 --PSSLVNWLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKF 161
P +L S E +IH+STD V+EG + Y E D PV+ YGK+K+ EKF
Sbjct: 104 LGPRNL----SIAAEAVGAKMIHVSTDYVFEGNGTKPYTEFDAPNPVSAYGKTKLEGEKF 159
Query: 162 IYEKCSNFAILRSSIIYG 179
+ + ++F I R++ +YG
Sbjct: 160 VQQFSNHFFIFRTAWLYG 177
>gi|167623451|ref|YP_001673745.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
gi|167353473|gb|ABZ76086.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4]
Length = 375
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFF----DVD 60
RVL+ G G LGQ LL ++E+ V A + P Q+L+ LP +V
Sbjct: 2 RVLITGAAGQLGQALL-SIAELT----QVTAAELTAP-QQMLVALLPEVLACIATTDEVI 55
Query: 61 LKSGSGFDAVALKFGQ-------PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
S D AL Q PDVV+NCAA + E D D A+++N + L+
Sbjct: 56 GVSHQQLDICALHSIQAAFDAFKPDVVINCAAFNGVDKAETDTDKAIAVNATGPKL--LA 113
Query: 114 SFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-I 171
+ L+H+STD V++G +K Y E+D +P++ YG+SK+ E+++ + A I
Sbjct: 114 GECKRLNIRLVHISTDFVFDGALKRPYTEQDMPSPLSAYGRSKLEGERWVNDILGAKATI 173
Query: 172 LRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+R+S +Y S ++ ++ + + E++ +D+ P + + +I L
Sbjct: 174 IRTSWLY-----SCCGQNF-VKTMQGLFKTRERLSVINDQSGSPTWCETLALVIFKLI-- 225
Query: 232 WLSEDKQMQL 241
KQ QL
Sbjct: 226 -----KQTQL 230
>gi|119944553|ref|YP_942233.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
gi|119863157|gb|ABM02634.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37]
Length = 295
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL++G TG LG L Q L ++ DV T S + +F VD+
Sbjct: 2 KVLIIGATGMLGYSLFQNLCDV--AHLDVYGTVRSIKGKEPFFSDCEER-LFKGVDVSDL 58
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +AV +K +PDVV+NC L A++IN S L + L+S ++ LI
Sbjct: 59 AAVEAV-IKEIKPDVVINCIGLIKQHSISKQHVDAVAIN--SLLPHQLASLCDSHSCKLI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
H STD +++G K FY EED +++YG+SK E S LR+SII
Sbjct: 116 HFSTDCIFDGKKGFYTEEDTPDALDLYGRSKCLGEV----DSSPHLTLRTSII 164
>gi|304405206|ref|ZP_07386866.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus
YK9]
gi|304346085|gb|EFM11919.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus
YK9]
Length = 299
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+K+R++V G G LG L++ L E+ H L + LD V
Sbjct: 1 MAKQRIVVTGANGQLGVDLVKHLEEL---------GHEVHGLGRAELDVTSERQV----- 46
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L+ +PDVV++ A + E +PD A +N + ++S +
Sbjct: 47 --------QHTLRELKPDVVIHSGAYTKVDQAEAEPDQAYMVNGYGTAN--IASAAHSIG 96
Query: 121 NLLIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
L+++STD V+ G + F Y E I PVNVYGKSK E+FI + I+R+S +Y
Sbjct: 97 AKLVYVSTDYVFNG-QGFRPYDEFSPIDPVNVYGKSKWMGERFIETLHARHYIVRTSWVY 155
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G + V L + ++ V +D+ CP + +D+ I L
Sbjct: 156 GAHGANFVKTMLKLG------AERGSVSVVNDQVGCPTFTKDLAACIGQL 199
>gi|257440888|ref|ZP_05616643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
A2-165]
gi|257196668|gb|EEU94952.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
A2-165]
Length = 306
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG +++ L E P+P+ L++A ++D+ +
Sbjct: 2 KIIVTGCKGQLGTEIIKQLRE---------GRSEIGPIPEKLMNATVIPVDLPELDISNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PDV++NCAA + CE + D+A N P +L + E
Sbjct: 53 KMVDDF-IRRQRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNL----AQAAEKTGAR 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ + C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGIAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ +L L
Sbjct: 167 ----SYYGKNF-VKTIVNAGRKFGKLEVVNDQCGNPTNAVDLAHELLQL 210
>gi|431806344|ref|YP_007233245.1| dTDP-4-dehydrorhamnose reductase [Liberibacter crescens BT-1]
gi|430800319|gb|AGA64990.1| dTDP-4-dehydrorhamnose reductase [Liberibacter crescens BT-1]
Length = 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
+ DL++ F LK +PD+VVN AA + E++P++ +IN + +++S
Sbjct: 33 EFDLQTHKDFREFFLKI-KPDIVVNPAAYTSVEKAESEPETVFAINAYGA--GYIASAAA 89
Query: 118 NKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+ I+LSTD V++G + S E P+NVYGKSK+A E+ + N+ ILR+
Sbjct: 90 HINVPCIYLSTDYVFDGSQVSPIDENTTPRPLNVYGKSKLAGEEMVISHTDNYVILRTGW 149
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL--S 234
IY P + + L + S ++ D+ P + I + +
Sbjct: 150 IYSPFNSNFLLTMLKLAETQS------EINVVSDQFGTPTSALHIADSIFKIARNLIMYP 203
Query: 235 EDKQMQLLLNV---GGPDRVSRVQMAE 258
EDK ++ + N+ GGP +S Q AE
Sbjct: 204 EDKTLRGIFNITARGGP--ISWAQFAE 228
>gi|227827280|ref|YP_002829059.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25]
gi|227459075|gb|ACP37761.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25]
Length = 275
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 56/298 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEG-KPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R+L+ G +G LG L L E E K +++ L L+ P + D +K
Sbjct: 2 RILITGASGQLGLELSSVLKEEELIKTFNIKEEQGGYKLD---LEDFP---LLEDFIIKK 55
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+PDV++N A+L+ CE + A +N + V + + E L
Sbjct: 56 ------------RPDVIINTASLTDVDKCEVEKAEAFKVNAEA--VKHIVRASRVIEAYL 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
IHLSTD V++G + Y E D P+N YG SK+ E + + I+R+S ++
Sbjct: 102 IHLSTDYVFDGERGLYNEGDLPNPINYYGLSKLLGETYALSYDDSL-IVRTSGVFR---- 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
K P+ ++ L +G++V F P+ R + + I L + +L
Sbjct: 157 ---HKGFPV-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELIQY------RKTGIL 205
Query: 244 NVGGPDRVSRVQMA--------------EVD--RG--VQSPADISMDITKLVQTLNID 283
NV G +R+SRV +A EVD +G + P D S+DI+K + L++D
Sbjct: 206 NVAG-ERISRVDLAMKIKDKFNLSGSIKEVDYVKGWIAKRPFDSSLDISKAKKILSVD 262
>gi|86357151|ref|YP_469043.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CFN 42]
gi|86281253|gb|ABC90316.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42]
Length = 295
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 39/255 (15%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A + DV+V+ AA + E++ + A S+N + ++ +IHLST
Sbjct: 44 AAAFSALRADVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVP--VIHLST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED P++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATGPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR------------- 231
++ ++L E + D+ CP D+ ILA+ R
Sbjct: 155 --FGNNFLKTMLRLAETRDHLRVVADQTGCPTSALDIADAILAIATRIITDPEPSLRGTF 212
Query: 232 ---------W--LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
W +E+ +LL + G V R+ A+ + PA+ ++ KL +T
Sbjct: 213 HLTGSGEASWADFAEEIFAELLKSGGRSVGVERIPTADYPTPAKRPANSRLNGDKLARTY 272
Query: 281 NIDPVTYKDGVKLTL 295
I +K + + +
Sbjct: 273 GIRLPEWKQSMTIVM 287
>gi|222445607|ref|ZP_03608122.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii
DSM 2375]
gi|222435172|gb|EEE42337.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2375]
Length = 280
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G G LG L+ L++ +++ T T L + H+ F
Sbjct: 2 KVLITGSNGMLGHDLIDVLND----KHELILTTSKT----LDITDKEHTVEF-------- 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+K +PD+V+N AA + CE + + A S+N V L+ + L+
Sbjct: 46 -------IKENKPDIVINSAAYTDVDGCEENRERAFSVN--GEGVRNLAIGCREADCPLV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG
Sbjct: 97 HISTDYVFNGKNDTPWVEDDEIGPISVYGKSKLEGEQAIQEILDKFFIVRTAWLYGVNG- 155
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
PK++ + +++ +DE P Y D+ + I L
Sbjct: 156 GNFPKTML-----ELAKTHDELTVVYDEIGTPTYTPDLAEAIGKL 195
>gi|433441650|ref|ZP_20408597.1| RmlD substrate binding domain superfamily protein, partial
[Haloferax sp. BAB2207]
gi|432186963|gb|ELK44325.1| RmlD substrate binding domain superfamily protein, partial
[Haloferax sp. BAB2207]
Length = 116
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 117 ENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+++E +H STD V++G Y+E+DE AP+ YG+SK+A E + + ++ ILR S
Sbjct: 3 DDREIPFVHYSTDYVFDGETDGLYEEDDEPAPIQEYGRSKLAGEHAVRDVNTDALILRLS 62
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+YG + + P QW+ S L+ G+ V F D+ P +V L L
Sbjct: 63 FVYGARGDTSDLVGFP-QWVASTLAAGDTVPLFTDQTMTPSRAGNVATTTLEL 114
>gi|319953123|ref|YP_004164390.1| dtdp-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237]
gi|319421783|gb|ADV48892.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237]
Length = 295
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK- 136
D +NCAA + E+D ++A +N V +L+ ++ E +LIH+STD V++G K
Sbjct: 58 DYCINCAAYTAVDKAEDDKENAFLVNAEG--VKFLAKACKSFETVLIHISTDFVFDGTKN 115
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
S Y E D P+NVYG SK+ E++I N+ I+R+S +Y ++
Sbjct: 116 SPYTENDITNPINVYGASKLKGEEYIKNILENYFIIRTSWVYS---------EFGNNFVK 166
Query: 197 SVLSKGE---KVEFFHDECRCPVYVRDVVKIILAL 228
++L G+ + D+ P + D+ ++IL +
Sbjct: 167 TMLKLGKDRNNLSVVDDQIGSPTFAEDLARLILEI 201
>gi|434399229|ref|YP_007133233.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
gi|428270326|gb|AFZ36267.1| dTDP-4-dehydrorhamnose reductase [Stanieria cyanosphaera PCC 7437]
Length = 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++VN AA + E + A IN + ++ E L+H+STD V++G
Sbjct: 51 KPSIIVNAAAYTAVDQAETEVKLANKINAIAPTA--MAEVAEKIGATLVHISTDYVFDGC 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+EED+ P+ VYGKSK+ E+ I CS + ILR++ +YG + K++
Sbjct: 109 NHTPYQEEDDTNPIGVYGKSKLLGEEGIINNCSRYLILRTAWVYGCRGHGNFVKTML--- 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR----------------------W 232
+ ++ E++ D+ P + D+ I + R W
Sbjct: 166 --RLGAEREEIRVVADQIGSPTWSYDIAVTITQMLAREIAGNSVLPTGIYHFTNSGVASW 223
Query: 233 -------LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPV 285
+E +Q+ L V ++ + AE Q PA ++ TK+ + L + P
Sbjct: 224 YDFAVAIFAEAQQLGFSLKV---KQIVPISTAEYPTPAQRPAYSVLNKTKITKALGVYPP 280
Query: 286 TYKDGVKLTL 295
++ ++ L
Sbjct: 281 YWRQSLQKML 290
>gi|29726001|gb|AAO88931.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + CS ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|148252645|ref|YP_001237230.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. BTAi1]
gi|146404818|gb|ABQ33324.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. BTAi1]
Length = 300
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 19/193 (9%)
Query: 68 DAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
DAV AL QPD+V+N AA + V + D+A + +V ++ + E IH
Sbjct: 45 DAVLQALHGFQPDIVINPAAYTA--VDRAEEDAAAAYHVNRDGARAVAEASARLEIPTIH 102
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
LSTD V++G K + Y E+D AP+NVYG SK+A E + ILR++ +Y S
Sbjct: 103 LSTDYVFDGAKPAPYVEDDAPAPINVYGASKLAGELAVAAANRRHVILRTAWVY-----S 157
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-----WLSEDKQM 239
P ++ ++ + + S + + +D+ CP D+ + ILA+ R W +E
Sbjct: 158 PFGQNF-VRTMLRLASSRDTLRVVNDQVGCPTSALDIARAILAIARRIDRAGWTNE---F 213
Query: 240 QLLLNVGGPDRVS 252
+ ++ GPD V+
Sbjct: 214 GGVTHIAGPDVVT 226
>gi|296447933|ref|ZP_06889842.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b]
gi|296254570|gb|EFH01688.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b]
Length = 300
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 39/236 (16%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
AL+ + D +V AA + E +P+ AM +N + +++ L+H+STD
Sbjct: 47 ALRDSRCDAIVGAAAYTAVDKSEQEPEIAMRVN--GAGAGFVAEAAAELGVPLVHISTDY 104
Query: 131 VYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G + Y+E+D AP+ VYG SK+ E + C ILR++ +Y P
Sbjct: 105 VFDGTAARPYREDDPTAPLGVYGASKLEGETRVLAACPGATILRTAWVYSP--------- 155
Query: 190 LPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNV 245
++ ++L G E+V D+ P D+ LA+ R + D ++ + ++
Sbjct: 156 FGANFVRTMLRLGETREEVGVVADQLGNPTSALDIADATLAVVTRLAQDADPALRGVFHM 215
Query: 246 GG-----------------------PDRVSRVQMAEVDRGVQSPADISMDITKLVQ 278
G P RV R+ A+ + PA+ +D +KL +
Sbjct: 216 TGSGEASWADVAEAIFARAAEHGRAPVRVRRITTADYPTPAKRPANSRLDNSKLAR 271
>gi|383320954|ref|YP_005381807.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324124|ref|YP_005384977.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490008|ref|YP_005407684.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435274|ref|YP_005649998.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|339272306|dbj|BAK48793.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|359270273|dbj|BAL27792.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273444|dbj|BAL30962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276614|dbj|BAL34131.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957082|dbj|BAM50322.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Bacillus subtilis BEST7613]
Length = 293
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VN AA + E +P+ A ++N + ++ + ++H+STD V++G +
Sbjct: 53 PDIIVNSAAYTAVDRAETEPELAYAVNALAPQA--IAKVAKEIGAYVVHISTDYVFDGSQ 110
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y+E D P+ VYG+SK E I + NF I+R++ +YG K++
Sbjct: 111 SSPYRETDATNPLGVYGQSKFQGEIAIADSGCNFLIVRTAWVYGVHGSGNFVKTMV---- 166
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ + +KV D+ P + +D+ + I ALT +
Sbjct: 167 -RLGKERQKVRVVADQIGGPTWAKDLAEAIAALTEQ 201
>gi|330819507|ref|YP_004348369.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3]
gi|327371502|gb|AEA62857.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3]
Length = 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD V+ CAA P VCE DP +A ++NV + ++ E + +STD V++G
Sbjct: 73 RPDAVIVCAAERRPDVCERDPAAARALNVDAPAAI--AARAEAIGAWTLAMSTDYVFDGS 130
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
Y+E D +P+N YG+ K E + S LR ++YGP I W
Sbjct: 131 APPYRETDLPSPLNAYGRGKADGEAALLAASSRACALRLPLLYGPA----------IDWA 180
Query: 196 DSVLSK------------GEKVEFFHDECRCPVYVRDVVKIILALTNR 231
DS ++ VE R P + DV ++I+ L R
Sbjct: 181 DSAVTSLVPAIVASSRDGAAPVEMDAWATRYPTWTPDVAEVIVQLAER 228
>gi|17231982|ref|NP_488530.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120]
gi|17133626|dbj|BAB76189.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120]
Length = 294
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+DL + ++ QP +++N AA + E +P+ A +IN + + ++ ++
Sbjct: 36 IDLTQADSLRQI-IREVQPQIIINAAAYTAVDKAETEPEIATAINATAPQI--IAEESQK 92
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ LIH+STD V++G +S Y+E D P++VYGK+K+A E I + + ILR++ +
Sbjct: 93 LGSFLIHISTDYVFDGQQSHPYQETDPTNPLSVYGKTKLAGEIAIQQTHPHHIILRTAWV 152
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
YG KS ++ + + ++ +++ D+ P + +D+ I
Sbjct: 153 YG-----SFGKSNFVKTMLRLGAERQEIRVVKDQIGSPTWAQDIADTI 195
>gi|229043066|ref|ZP_04190796.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676]
gi|228726307|gb|EEL77534.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676]
Length = 284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + +GE + D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG-----KERGE-ISVVADQVGSPTYVADLNMVINKLIH 200
>gi|77164294|ref|YP_342819.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707]
gi|254434601|ref|ZP_05048109.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27]
gi|76882608|gb|ABA57289.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707]
gi|207090934|gb|EDZ68205.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27]
Length = 295
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 30/181 (16%)
Query: 2 SKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
+++R+L++G TG +G L + L+ PL ++ +DL
Sbjct: 4 TQRRILLIGATGQVGWELQRTLA----------------PLGEVFAPGRER------LDL 41
Query: 62 KSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
D++ L QP ++VN AA + E +P+ A++IN + V L+ +
Sbjct: 42 AQ---LDSIRPCLAETQPALIVNAAAYTAVDKAEEEPEQALAINGKAPGV--LAETARQQ 96
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
IH STD V++G K+ Y+E D P+NVYG++K+ E+ I + ILR+S +Y
Sbjct: 97 GAAFIHYSTDYVFDGKKAAPYRESDTPRPLNVYGQTKLTGEQAIVAVGGAYLILRTSWVY 156
Query: 179 G 179
G
Sbjct: 157 G 157
>gi|169776059|ref|XP_001822496.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
oryzae RIB40]
gi|83771231|dbj|BAE61363.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 323
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S P +L A DL++
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCFVVGQGYSRANPPTILKA----------DLENKD 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P ++++CAA P +CE DP+ A +NV ++ L+ ++ LI+
Sbjct: 62 DIQRI-LDEAKPQIIIHCAANRSPDLCEQDPEKARRVNVEATRT--LAEEASSRGAFLIY 118
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + E P N+YG+ K E + E +LR ++YGP
Sbjct: 119 ISTDYVFPGKEGEAPYETDAETNPPNLYGQLKRDGEVAVLEATKETGLGLVLRVPVLYGP 178
Query: 181 ---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+ S V + W K++ + R P DV ++ + +++ E
Sbjct: 179 SDNNSESAVNCLIDAVWKSQTPESSVKMDDWAQ--RYPTNTEDVARVCRDIVIKYIKERT 236
Query: 238 ---QMQLLLNVGGPDRVSRVQMAE---------VDR-----------GVQSPADISMDIT 274
Q +L DR+++ ++ E +DR GVQ P D + T
Sbjct: 237 RLPQQPHILQFSSEDRMTKYEICEKFAEVLGLPLDRMIRNKQGNEPGGVQRPYDTHLS-T 295
Query: 275 KLVQTLNID 283
K ++ L ID
Sbjct: 296 KGLKDLGID 304
>gi|260832866|ref|XP_002611378.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae]
gi|229296749|gb|EEN67388.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae]
Length = 288
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 47/291 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G +G LG+ L+Q G ++V +S L VDL+
Sbjct: 3 RVLITGASGLLGRALMQEFQGAAG--WEVLGLAYSRAGGSLK-----------KVDLRDQ 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +F +P+++++ AA P V E D ++ ++NV E +
Sbjct: 50 AAVRETVQEF-KPNILIHSAAQRRPDVVEKDEEATSALNV------------EATRTVAQ 96
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
TD V++G +K D P+N YG SK+A EK E + A+LR I+YGP +
Sbjct: 97 AARTDYVFDGKSPPHKVTDPPNPLNKYGISKLAGEKVALEVAKDGAVLRVPILYGP--VE 154
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ +S +V + + + E R P +V D+ + L + L +D + + +
Sbjct: 155 AIDESAVTVLFGAVQNTEKTAKMSDYERRYPTHVDDIAAVCRQLAEKRL-QDPSLHGVFH 213
Query: 245 VGGPDRVSR----VQMAEV--------------DRGVQSPADISMDITKLV 277
G + +++ + MAEV G P + +D+++L
Sbjct: 214 WSGDEEMTKYTMSIAMAEVFSLPSSHLVPDKEPSGGAPRPYNAQLDVSRLT 264
>gi|423606980|ref|ZP_17582873.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD102]
gi|401241170|gb|EJR47562.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD102]
Length = 284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++R+++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 RERIIITGANGQLGKQLQE---ELNPEEYDI------YPFDKKLLD------------IT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V K +P ++++CAA + E + D A IN + + V S E K
Sbjct: 41 NISKVQQVVQKI-RPHIIIHCAAYTKVDQAEKERDLAYRINAIGARNVAVASQLVEAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + E+V D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KEREEVSVVADQIGSPTYVADLNVMINKLIH 200
>gi|117924362|ref|YP_864979.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus marinus MC-1]
gi|117608118|gb|ABK43573.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus marinus MC-1]
Length = 301
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 138/317 (43%), Gaps = 43/317 (13%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ R L++G +G++GQHLL+ L P T+ TP + FD
Sbjct: 1 MAMARFLIIGASGFIGQHLLRQLG-----PEQCLGTYAHTPF---------DGGIHFDPT 46
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L F + +G + + A+S C NDP + +INV +S ++ + + +
Sbjct: 47 LIDPDQFLDL---YGHVEQIYLLMAVSSLITCANDPQGSYAINVEASKA--IALWCKKHQ 101
Query: 121 NLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNF-AILRSSIIYG 179
L+ S+D V+ G + Y E+ P+ YGK K E F+ + +R S Y
Sbjct: 102 IPLLFTSSDAVFGGQQGLYDEQHIPTPLVTYGKQKREVEVFLQAHLPHLHTTVRLSKTY- 160
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV---KIILALTNRWL--- 233
+ +P K+L W+ + + + + D+ P++V D V + ++A +R L
Sbjct: 161 --SSNPQDKTLLSAWVRA-WQQQQPIMCATDQRFNPIHVEDAVVGMQQLMAGQHRGLYHL 217
Query: 234 ---SEDKQMQLLLNVG-------GP---DRVSRVQMAEVDRGVQSPADISMDITKLVQTL 280
+ + QLLL++ GP +V + E+ P DIS I KL+ T+
Sbjct: 218 CGPTPVDRYQLLLDLQECYEQQLGPLPSWQVKACLINELGLAETWPIDISTRIDKLLATI 277
Query: 281 NIDPVTYKDGVKLTLAA 297
+ P T + G + + A
Sbjct: 278 PLHPRTPQQGCQQLIQA 294
>gi|209883705|ref|YP_002287562.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5]
gi|337742577|ref|YP_004634305.1| dTDP-4-dehydrorhamnose reductase RfbD [Oligotropha carboxidovorans
OM5]
gi|386031542|ref|YP_005952317.1| dTDP-4-dehydrorhamnose reductase RfbD [Oligotropha carboxidovorans
OM4]
gi|209871901|gb|ACI91697.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5]
gi|336096608|gb|AEI04434.1| dTDP-4-dehydrorhamnose reductase RfbD [Oligotropha carboxidovorans
OM4]
gi|336100241|gb|AEI08064.1| dTDP-4-dehydrorhamnose reductase RfbD [Oligotropha carboxidovorans
OM5]
Length = 303
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ +P+++VN AA + E + IN + + L+ LIH STD
Sbjct: 48 AVRAARPNLIVNAAAYTAVDKAETETALCERINADAPRI--LAEEARATGAWLIHYSTDY 105
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
V++G K + Y E D AP+NVYG++K+A ++ I + ++F ILR S +YG
Sbjct: 106 VFDGTKPTAYTENDATAPLNVYGRTKLAGDRAIMDTATDFTILRVSWVYG 155
>gi|254286304|ref|ZP_04961263.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226]
gi|421350082|ref|ZP_15800450.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae HE-25]
gi|150423719|gb|EDN15661.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226]
gi|395955189|gb|EJH65792.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae HE-25]
Length = 296
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + CS ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|418019339|ref|ZP_12658842.1| rfbD [Candidatus Regiella insecticola R5.15]
gi|347605283|gb|EGY29746.1| rfbD [Candidatus Regiella insecticola R5.15]
Length = 298
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+DL++ G + V L+ PD++VN AA + E P A IN + V ++++
Sbjct: 33 DIDLENLEGLENV-LRARTPDIIVNAAAYTAVDQAETHPIIAHKINAKA--VEVMTNYAR 89
Query: 118 NKENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
+LL+H STD V++G K + Y E D P +VYG SK A EK I + I R+S
Sbjct: 90 QNASLLVHYSTDYVFDGKKATAYVEIDATHPQSVYGHSKEAGEKTILQSGCQALIFRTSW 149
Query: 177 IYGPQ 181
++ Q
Sbjct: 150 VFSAQ 154
>gi|418047400|ref|ZP_12685488.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae JS60]
gi|353193070|gb|EHB58574.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium rhodesiae JS60]
Length = 287
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
D+VVNCAA++ E DPD+A ++N P ++ + + LIHLSTD V+ G
Sbjct: 48 DLVVNCAAIANVDTAEADPDTAYAVNTAGPENVAHACARVGAQ----LIHLSTDYVFSGE 103
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y+ D AP+ VYG+SK+A E + + I+R+S +Y + V +
Sbjct: 104 QRHPYEVGDTAAPLGVYGRSKLAGELAVLAAMPDAHIVRTSWVYTGADGTDV-----VAV 158
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE--------------DKQMQ 240
+ + + VE D+ P YV+D+V + + + E D+
Sbjct: 159 LRRLAATDRTVEAVDDQIGSPTYVKDLVDALFEIGAGDIREPVLHVANDGACTRYDQARA 218
Query: 241 LLLNVGG-PDRVSRVQMAEVDRGVQSPA 267
+ +G P RV V A+ R PA
Sbjct: 219 VFEELGADPGRVRPVSAAQSARKAPRPA 246
>gi|229068877|ref|ZP_04202171.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185]
gi|229078514|ref|ZP_04211074.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2]
gi|423434817|ref|ZP_17411798.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4X12-1]
gi|228704830|gb|EEL57256.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2]
gi|228714161|gb|EEL66042.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185]
gi|401125055|gb|EJQ32815.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG4X12-1]
Length = 284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDFAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|239628292|ref|ZP_04671323.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518438|gb|EEQ58304.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 46 LLDALPHSFVFFDVD----LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMS 101
LL + P + DVD SG + + +P ++NCA L+ C+ +P+ A
Sbjct: 20 LLRSEPVELLLTDVDSVDITVSGDVMEYAGMN--RPHFIINCAGLTDLARCQREPELAFK 77
Query: 102 INVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEK 160
+N + LS + L+ STD V++G + Y E D P +YGKSK+A E
Sbjct: 78 VNALGARN--LSVAARMGKARLVQFSTDDVFDGDSREPYTEFDTPGPQTIYGKSKLAGEN 135
Query: 161 FIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVY 217
F+ E CS I+RSS I+G SP ++ +L E+ + H D+ P
Sbjct: 136 FVREFCSRHIIIRSSWIFGAG--SP--------YLGQILRMAEQGQVIHAAADQYAAPTG 185
Query: 218 VRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE 258
++ + + L + ED L +V G SR + A
Sbjct: 186 AEELAEKTVELM--YHGEDG----LYHVTGQGSCSRYEFAR 220
>gi|84386938|ref|ZP_00989962.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01]
gi|84378228|gb|EAP95087.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01]
Length = 293
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G L + L+ E L LD H +D+ S
Sbjct: 2 RILITGCHGQVGSSLTEQLANYENTEV-------------LALD-REH------LDITSQ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A +F +P +++N AA + E + D + +IN +L+ ++ ++
Sbjct: 42 DAVNAAVAEF-KPSIIINAAAHTAVDKAEEEADLSYAINRDGP--KYLAQAAQSVGAAIL 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG K+ Y E D P VYGKSK+A E + E C ILR++ ++G
Sbjct: 99 HISTDYVFEGNKAGEYVETDATNPQGVYGKSKLAGESAVAEACDKHIILRTAWVFGESGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + + LS D+ P Y D+ ++ + R
Sbjct: 159 NFVKTMLRLGENRNALS------IVGDQFGGPTYAGDIANALIQIAKR 200
>gi|15897732|ref|NP_342337.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2]
gi|6015645|emb|CAB57472.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2]
gi|13814013|gb|AAK41127.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus
P2]
Length = 226
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 43/229 (18%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV++N AA++ CE + + A IN + V + + E IH+STD V++G
Sbjct: 9 RPDVIINTAAMTDVDKCEVEREKAYKINAEA--VKHMVRASRVVEAYFIHVSTDYVFDGT 66
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
K YKE+D P+N YG +K+ E F + I S + K P+ ++
Sbjct: 67 KGNYKEDDLPNPINYYGLTKLLGETFALSYDDSLVIRTSGVF--------RHKGFPV-YV 117
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKII---LALTNRWLSEDKQMQLLLNVGGPDRVS 252
L +G+ V F + P+ R + I LAL + LLNV G +R+S
Sbjct: 118 YKTLKEGKTV-FAYKGYYSPISARKLASAIEELLAL---------RKTGLLNVAG-ERIS 166
Query: 253 RVQMA--------------EVDR----GVQSPADISMDITKLVQTLNID 283
R ++A EVD + P D S+D +K + L++D
Sbjct: 167 RYELALKIKEKFNLPGEVKEVDEVKGWTARRPFDSSLDYSKAKKILSVD 215
>gi|313201255|ref|YP_004039913.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688]
gi|312440571|gb|ADQ84677.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688]
Length = 301
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E +P+ A +IN + + L+ ++H STD V++G
Sbjct: 53 RPDVIVNPAAYTAVDKAETEPELAYAINAEAPRI--LAEEAAELGARMVHYSTDYVFDGR 110
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S Y+E D P+ VYG SK+A E+ + + + ILR+S +YG K+ +
Sbjct: 111 ASKPYRETDMTNPLGVYGASKLAGEQAVQQAGAQHLILRTSWVYG-----AYGKNF-LHT 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
I + + + + D+ P D+ L L W E + L N G
Sbjct: 165 ILRLARERDSLGIVADQLGAPTSSHDIASATLTLLKSWQPERSGIYHLTNSG 216
>gi|163789265|ref|ZP_02183707.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1]
gi|159875480|gb|EDP69542.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1]
Length = 293
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 30/259 (11%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D+D+ + +V D +NCAA + E D +A S+NV S L+
Sbjct: 36 DLDITKKTHVQSVFNSIKDLDYCINCAAYTAVDKAEEDTINAYSVNVLGS--KNLAEACY 93
Query: 118 NKENLLIHLSTDQVYEG---VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRS 174
E L+H+STD V+ G V Y E+ P++VYG++K+ EK I E I R+
Sbjct: 94 EYEVTLVHISTDFVFNGTVPVPQPYSEDSNTGPLSVYGETKLKGEKVIAETIKKHFIFRT 153
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------ 228
S ++ + + L + ++ ++ D+ P Y RD+ K+IL
Sbjct: 154 SWMFSEFGNNFLKTMLKLA------TERNEINVVSDQIGSPTYARDLAKVILCFIEKEYK 207
Query: 229 -------TNR----WLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLV 277
NR W + K++ L G ++++V+ + P +D +K+
Sbjct: 208 NYGIFHYCNRGSTTWYNFAKEIFSLSQKGV--KLNKVKTKDYPTLAARPKYSVLDTSKIE 265
Query: 278 QTLNIDPVTYKDGVKLTLA 296
QTL + P+ ++D + + ++
Sbjct: 266 QTLGVTPLKWEDSLAIAIS 284
>gi|167038026|ref|YP_001665604.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116439|ref|YP_004186598.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856860|gb|ABY95268.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929530|gb|ADV80215.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 297
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE+D D+A +N P +L + + L+H+STD V+
Sbjct: 63 RPDIIINCAAYTNVDRCESDIDTAFKVNAIGPRNL----AIAAQKVGAKLLHVSTDYVFS 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G S ++E D P++VYGK+K+ E+++ E C + I+R++ +YG K+
Sbjct: 119 GTGSVPFREYDIPQPISVYGKTKLLGEQYVREFCDKYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+++ KG +E +D+ P D+ IL L
Sbjct: 174 TILNTAKEKG-YLEVVNDQRGNPTNAEDLAYHILKL 208
>gi|150009110|ref|YP_001303853.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis ATCC
8503]
gi|255015731|ref|ZP_05287857.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_7]
gi|262384010|ref|ZP_06077146.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B]
gi|410104811|ref|ZP_11299722.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D25]
gi|149937534|gb|ABR44231.1| putative dTDP-4-dehydrorhamnose reductase [Parabacteroides
distasonis ATCC 8503]
gi|262294908|gb|EEY82840.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B]
gi|409233386|gb|EKN26223.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D25]
Length = 287
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G G LG + +S+ G ++F+F D+D
Sbjct: 2 KTVLVTGANGQLGNSIHARISQYPG-----------------------YNFLFTDIDTLD 38
Query: 64 GSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+AV + DV V+NCAA + E D M IN V L
Sbjct: 39 ICDKEAVRKYVLENDVQYVMNCAAYTAVDKAEEHEDLCMRIN--RDAVRNLGEAAHAVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D PV+VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 KVIHVSTDYVFDGTSCRPYLESDATCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +VL G +++ F D+ P Y D+ +LA+ R
Sbjct: 155 -------SEYGNNFMKTVLRLGKERDELRFIFDQVGTPTYAGDLAVAMLAVLER 201
>gi|397663325|ref|YP_006504863.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Legionella pneumophila subsp.
pneumophila]
gi|395126736|emb|CCD04919.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Legionella pneumophila subsp.
pneumophila]
gi|410173932|emb|CCO02576.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
Length = 294
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 44/245 (17%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +N + V+ L ++ K LIHLSTD V++G
Sbjct: 51 KPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVSHLVNYCSFKNIPLIHLSTDYVFDGE 108
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D PV+ YG++K E+ I + + ILR S ++G Q + V L
Sbjct: 109 KEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTIL---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------W-------------- 232
++ S +++ D+ P RD+ +++ + + W
Sbjct: 165 --NLASSRKELNIVADQWGRPTSARDIARVLFEIVQKTRHSSFDYWGLYHYAGQGVTNWH 222
Query: 233 --------LSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
L+++KQ+ L L P ++ E P + +D TK+ L I
Sbjct: 223 EFANVFLNLAKEKQLLLTLTDLNP-----IKSQEYPTRATRPKNSVLDTTKIETILGIKS 277
Query: 285 VTYKD 289
++K+
Sbjct: 278 CSWKN 282
>gi|295109349|emb|CBL23302.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum A2-162]
Length = 283
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG +PDV++NC ++ CE +P+ A +N + LS + ++ LST
Sbjct: 45 INFGTVNRPDVIINCTGITDTDECEENPEHAYRVNALGARN--LSIVARKCGSKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG+SK A E ++ E I+RS+ +YG + V
Sbjct: 103 DDVFDGQSKKPYTEFDDTNPLTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGHGGNNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ L G + D+ P +D+ ++IL L
Sbjct: 163 RVL------EATESGRTLSVASDQFGSPTSAKDLARMILYL 197
>gi|296501911|ref|YP_003663611.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171]
gi|296322963|gb|ADH05891.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|229189410|ref|ZP_04316427.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876]
gi|365162021|ref|ZP_09358156.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 7_6_55CFAA_CT2]
gi|228594001|gb|EEK51803.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876]
gi|363619338|gb|EHL70657.1| dTDP-4-dehydrorhamnose reductase [Bacillus sp. 7_6_55CFAA_CT2]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDFAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|30019368|ref|NP_830999.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579]
gi|229126629|ref|ZP_04255641.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4]
gi|229143930|ref|ZP_04272347.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24]
gi|423643628|ref|ZP_17619246.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD166]
gi|423647255|ref|ZP_17622825.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD169]
gi|29894911|gb|AAP08200.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579]
gi|228639493|gb|EEK95906.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24]
gi|228656569|gb|EEL12395.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4]
gi|401273107|gb|EJR79093.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD166]
gi|401286073|gb|EJR91906.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD169]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|354559526|ref|ZP_08978774.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
metallireducens DSM 15288]
gi|353541771|gb|EHC11237.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium
metallireducens DSM 15288]
Length = 282
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL+ G +G LG+ L L + + L +A+P S DV
Sbjct: 2 KVLITGASGQLGRELTIFLEQ------------------ERLFEAIPLSRKELDV----- 38
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F V L+ +PD++++ AA + E + D A ++N + L + E
Sbjct: 39 TDFLQVQSTLQKHRPDIIIHTAAYTQVDRAETEQDQAYAVNAMGTRNIALGA--EKIGAK 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+++STD V++G K Y E D+ P N YGKSK A E+F+ CS + I+R+S +YG
Sbjct: 97 LVYISTDYVFDGQKIMPYIEFDKRNPQNTYGKSKAAGEEFVQAFCSQYFIVRTSWVYGNY 156
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L ++ + ++++ +D+ P Y D+ I +
Sbjct: 157 GPNFVKTML------NLAKEKKELKVVNDQVGAPTYTLDLAYFIFEI 197
>gi|229108781|ref|ZP_04238388.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15]
gi|229149526|ref|ZP_04277758.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550]
gi|228633872|gb|EEK90469.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550]
gi|228674672|gb|EEL29909.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|158522536|ref|YP_001530406.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3]
gi|158511362|gb|ABW68329.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3]
Length = 298
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+PD+++NCAA + CE + D+A + N P +L + + + L+H+STD V++
Sbjct: 50 RPDLILNCAAFTAVDACETEQDTAFAANAGGPENL----AQAAQKRGCRLVHISTDYVFD 105
Query: 134 G---VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
G V Y E D PV+VYG+SK+A E+ + E S ++R++ +YG
Sbjct: 106 GERPVPEAYIETDPPDPVSVYGRSKLAGEQAVLETGSANTVVRTAWLYG 154
>gi|409992428|ref|ZP_11275618.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
gi|409936705|gb|EKN78179.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str.
Paraca]
Length = 292
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 KPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG +
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+ ++L G E++ D+ P + D+ I+ L + SE + N G
Sbjct: 160 VKTMLRLGREREELRVVMDQVGTPTWTGDLATAIVQLIPQLNSETSGIYHYTNSG 214
>gi|16329215|ref|NP_439943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451813374|ref|YP_007449826.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|1651695|dbj|BAA16623.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
gi|451779343|gb|AGF50312.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803]
Length = 280
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
PD++VN AA + E +P+ A ++N + ++ + ++H+STD V++G +
Sbjct: 40 PDIIVNSAAYTAVDRAETEPELAYAVNALAPQA--IAKVAKEIGAYVVHISTDYVFDGSQ 97
Query: 137 SF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
S Y+E D P+ VYG+SK E I + NF I+R++ +YG K++
Sbjct: 98 SSPYRETDATNPLGVYGQSKFQGEIAIADSGCNFLIVRTAWVYGVHGSGNFVKTMV---- 153
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ + +KV D+ P + +D+ + I ALT +
Sbjct: 154 -RLGKERQKVRVVADQIGGPTWAKDLAEAIAALTEQ 188
>gi|197334022|ref|YP_002154930.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11]
gi|197315512|gb|ACH64959.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11]
Length = 293
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 30/255 (11%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G +G L + L++ E ST + L D L D+ +
Sbjct: 2 RVLITGCYGQVGHCLTEQLADEE-----------STIVLSLDRDQL---------DITNQ 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + F QP +++N AA + E + D + IN ++L+ + + ++
Sbjct: 42 DAVNTIVDDF-QPTIIINAAAHTAVDKAEEEVDLSYVINRDGP--SYLAQAAQRVDAAML 98
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG K Y+E D P VYG+SK+A E + C ILR++ ++G
Sbjct: 99 HISTDYVFEGNKVGEYQETDTTNPQGVYGESKLAGEIAVANACDKHIILRTAWVFGENGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + + LS D+ P Y D+ ++ + R D+ +
Sbjct: 159 NFVKTMLRLAATRNALS------IVGDQFGGPTYAGDIAHALIQIAKRITKGDEVEYGVY 212
Query: 244 NVGGPDRVSRVQMAE 258
+ G VS + AE
Sbjct: 213 HYSGLPHVSWFEFAE 227
>gi|409418099|ref|ZP_11258109.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. HYS]
Length = 286
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+PD+++N AA + E++P+ A +IN + + F E L LIH STD V+
Sbjct: 50 KPDLIINAAAHTAVDKAESEPELAFAINARAPGI-----FAEEAAKLGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K S Y E+DE P+ VYG+SK+A E+ I ILR+S +Y + + L
Sbjct: 105 DGSKDSPYTEDDEPNPLGVYGRSKLAGEQAIAAVGGQHLILRTSWVYSRHGSNFL---LT 161
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+Q +L + ++ D+ P + + AL RW
Sbjct: 162 MQ---RLLQEKPELRIVADQIGAPTWAGTIAISTRALIERW 199
>gi|229195518|ref|ZP_04322286.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293]
gi|423576955|ref|ZP_17553074.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus MSX-D12]
gi|228588058|gb|EEK46108.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293]
gi|401206126|gb|EJR12919.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus MSX-D12]
Length = 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 33/228 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
++R+++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 RERIIITGANGQLGKQLQE---ELNPEEYDI------YPFDKKLLD------------IT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V K +P ++++CAA + E + D A IN + + V S E K
Sbjct: 41 NISKVQQVVQKI-RPHIIIHCAAYTKVDQAEKERDLAYRINAIGARNVAVASQLVEAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V + + + E+V D+ P YV D+ +I L
Sbjct: 157 YGNNFVKTMMRLG------KEREEVSVVADQIGSPTYVADLNVMINKL 198
>gi|417957905|ref|ZP_12600823.1| dTDP-4-dehydrorhamnose reductase [Neisseria weaveri ATCC 51223]
gi|343967651|gb|EGV35894.1| dTDP-4-dehydrorhamnose reductase [Neisseria weaveri ATCC 51223]
Length = 286
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 42 LPQLLLDALPHSFVFFDVDLKSGSGFDAVAL----KFGQPDVVVNCAALSVPRVCENDPD 97
L + D LP ++ D + DA A+ + QPD +VN AA + E + D
Sbjct: 12 LGRCFKDRLPENWELIAADSATLDITDAEAVLNMARSFQPDAIVNAAAYTAVDRAEQESD 71
Query: 98 SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKV 156
+A ++N S V+ L+S IH+STD +++G K+ Y E P+NVYG+SK+
Sbjct: 72 TAFAVN--GSAVHNLASAARAVHARFIHISTDYIFDGKAKTPYTESGLPNPLNVYGRSKL 129
Query: 157 AAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPV 216
A E N I+R+S ++ + V L + LS + D+ P
Sbjct: 130 AGELLALSTNPNSLIIRTSWVFSEHGNNFVKTMLDAAAANRELSIAD------DQTGTPT 183
Query: 217 YVRDVVKIILALTNR 231
Y D+ +I++ L N+
Sbjct: 184 YAGDLAQILIDLLNK 198
>gi|325920447|ref|ZP_08182375.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865]
gi|325549094|gb|EGD20020.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865]
Length = 302
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
LV G G +G LL+ L E +G V AT S LP D FD +
Sbjct: 3 TLVFGANGQVGTELLRAL-EADGA---VQATTRSGRLP----DGSACETADFDAPEALPA 54
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
D +A P VVN AA + E DPDSAM N P + W ++ E L
Sbjct: 55 LLDWIA-----PSRVVNAAAYTAVDRAEQDPDSAMRANALSPGVIAAWCAA----HEVPL 105
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+H STD V++G + Y E+ + +P+ VYG +K+A E I + ILR++ +Y
Sbjct: 106 VHYSTDYVFDGQGTEPYLEDAQTSPLGVYGGTKLAGEDAIRASGAQHLILRTAWVY 161
>gi|423514861|ref|ZP_17491366.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuA2-1]
gi|402441373|gb|EJV73329.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuA2-1]
Length = 273
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 31/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L+Q LS + Y V T LD VF
Sbjct: 2 KILITGVDGQLGQTLIQVLSGTRHELYGVNRT---------TLDITNKLRVF-------- 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D V +PDV+V+CAA + E D A +NV + +++ + L+
Sbjct: 45 SYIDRV-----KPDVIVHCAAFTNVDGAEKDKGLAYEVNVLGT--KYIAQAAGRIKCKLV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y ED P+N+YG++K+A E + + N I+R+S I+G
Sbjct: 98 YISTDYVFDGEKHTPYNLEDRPNPLNIYGETKLAGEHLVTKYTKNHFIIRTSWIFGKGDG 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ K I + S +V D+ P Y D+ I L
Sbjct: 158 HFIAK------IGKIASLYGEVRVVSDQFGSPTYAIDLANFIEEL 196
>gi|221212106|ref|ZP_03585084.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
gi|221168191|gb|EEE00660.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1]
Length = 316
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 18/234 (7%)
Query: 8 VVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSGF 67
++G +G LG+ ++ L+ + +A + LL P DV
Sbjct: 1 MIGASGLLGRAVVASLAR-DPAFATIATIRNRDTRGARLLALPPDKIAILDV-------L 52
Query: 68 DAVALKFG----QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
D AL+ +P VV CAA P VCE DP A +INV + + +
Sbjct: 53 DRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAP--ARIGALAARYGAWT 110
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP--- 180
+ +STD V++G + Y+E+ P+N+YG++K+ E + +LR ++YGP
Sbjct: 111 LGISTDYVFDGRAAPYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLYGPIAD 170
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ S V +P + S + + V R P Y DV +I L +R L+
Sbjct: 171 WSESAVTSLVP-AIVASARADADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLA 223
>gi|229512767|ref|ZP_04402235.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21]
gi|229350277|gb|EEO15229.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21]
Length = 296
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITHS 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|389626815|ref|XP_003711061.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
70-15]
gi|351650590|gb|EHA58449.1| methionine adenosyltransferase 2 subunit beta [Magnaporthe oryzae
70-15]
Length = 315
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M++KR LV G TG LG+ + + G + V T S L A D
Sbjct: 1 MTEKRALVTGATGLLGREVAKAFQLKHG--WTVTGTAFSRADGVSTLRA----------D 48
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + + + V L +P VVV+CAA P + DP+ +NV ++ L+ +++
Sbjct: 49 LANEAEVEKV-LDQVKPHVVVHCAANRFPDKVDQDPEGTRRLNVAATAS--LARLCADRD 105
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCS---NFAILRSS 175
LI++STD V+ G ++ Y P N+YG++K+ EK + E+ + ++R
Sbjct: 106 VALIYISTDYVFSGRPGEAPYAAGAATGPTNLYGQTKLDGEKAVLEEMAAKGRGVVMRVP 165
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG +P ++ + +D+V E K++ H R P DV ++ + ++
Sbjct: 166 VLYG-HAETPGESAVNV-LMDAVWKSQEAETKIKMDHWAIRYPTNTEDVGRVCADVAEKY 223
Query: 233 L--SEDKQMQLLLNVGGPDRVSRVQMAEV 259
+ + K + +L D++++ ++ +V
Sbjct: 224 VDAQDAKSLPKVLQFSSEDKLTKYEICQV 252
>gi|91211324|ref|YP_541310.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UTI89]
gi|300986907|ref|ZP_07177885.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1]
gi|386599917|ref|YP_006101423.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IHE3034]
gi|386603932|ref|YP_006110232.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UM146]
gi|422361972|ref|ZP_16442553.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 153-1]
gi|432457148|ref|ZP_19699333.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE201]
gi|432574120|ref|ZP_19810601.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE55]
gi|432584302|ref|ZP_19820698.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE57]
gi|433058560|ref|ZP_20245606.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE124]
gi|433120645|ref|ZP_20306319.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE157]
gi|433168979|ref|ZP_20353607.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE180]
gi|433183707|ref|ZP_20367961.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE85]
gi|91072898|gb|ABE07779.1| dTDP-4-dehydrorhamnose reductase, subunit of dTDP-L-rhamnose
synthetase [Escherichia coli UTI89]
gi|288816224|gb|ADC54946.1| RmlD [Escherichia coli]
gi|294490643|gb|ADE89399.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IHE3034]
gi|300407836|gb|EFJ91374.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1]
gi|307626416|gb|ADN70720.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UM146]
gi|315295250|gb|EFU54585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 153-1]
gi|430982248|gb|ELC98952.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE201]
gi|431108188|gb|ELE12345.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE55]
gi|431115967|gb|ELE19434.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE57]
gi|431568815|gb|ELI41777.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE124]
gi|431642895|gb|ELJ10601.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE157]
gi|431687831|gb|ELJ53372.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE180]
gi|431706849|gb|ELJ71414.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE85]
Length = 299
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQLLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++EED AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEEDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|406880225|gb|EKD28632.1| Spore coat polysaccharide biosynthesis protein spsK [uncultured
bacterium]
Length = 287
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 76 QPDVVVNCAAL-SVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG 134
+PD+++N AA +VP+ C+ +P++A +IN+ + L+ LIH+STD V++G
Sbjct: 49 KPDIIINTAAFHNVPK-CDTEPENATAINIIGA--KNLACIASKINAELIHISTDYVFDG 105
Query: 135 VK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
K S Y E D P+N Y +K+A E + + C + I+R IYG + P
Sbjct: 106 KKNSPYLETDTPNPLNFYAITKLAGELAVQDFCDRYKIIRVGGIYG---VIPCRAKGGTN 162
Query: 194 WIDSVLS-KGEK--VEFFHDECRCPVYVRDVVKIILALTN 230
++ S+L GEK +E DE P +D+ + I AL N
Sbjct: 163 FVASMLKLAGEKDELEVVADEIITPTNTKDIARQIKALLN 202
>gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
gi|256584548|gb|ACU95681.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM
43017]
Length = 313
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GG G LG+ L+ + + G DV A P L P + V DL +G
Sbjct: 14 VLVPGGRGQLGRDLVAAAAAL-GDRIDVIA-----PGSAELDVTEPGAVVEAVTDLATG- 66
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A + G+ VV+N AA + E D +A S+N + L++ ++ L+H
Sbjct: 67 -----AAQSGRRAVVINAAAYTAVDAAEEDEGTAFSVNADGPRM--LAAVCSSRGVPLVH 119
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V+ G Y+ ED + P + YG++K A E + + ++R++ +YG +
Sbjct: 120 VSTDYVFSGTADRPYEPEDALGPRSAYGRTKAAGENAVLGSGARAWVVRTAWLYGAGGNN 179
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
V + ++ S+ + V D+C P D+ + +L L +R
Sbjct: 180 FVRTMMELE------SRRDTVSVVDDQCGSPTSSADLARGLLELADR 220
>gi|423588288|ref|ZP_17564375.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD045]
gi|401226273|gb|EJR32813.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD045]
Length = 284
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQIGSPTYVADLNMVINKLIH 200
>gi|296331422|ref|ZP_06873894.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676407|ref|YP_003868079.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151537|gb|EFG92414.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414651|gb|ADM39770.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 283
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 35/227 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LG L + L + Y+V A L + +++ D +S
Sbjct: 3 KVLVTGAGGQLGLELCRQLKQ---AGYEVIA------LTKKMMNI---------ADQRS- 43
Query: 65 SGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
V FG QPD+VVN AA + CE + D A SIN + + + +
Sbjct: 44 -----VRYSFGHYQPDIVVNTAAFTSVDKCETELDKAYSINGIGAYYTAMEATRIGAQ-- 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
IH+STD V++G + Y+E+D + P +YGKSK E+ I + I+R+S +YG
Sbjct: 97 YIHISTDYVFDGRGTQPYREDDPLDPNTIYGKSKKLGEELIRLATKDSTIIRTSWVYGH- 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S +Q + + +++ D+ P Y +D+ + ++ L
Sbjct: 156 -----GGSNFVQTMLRLAETKQELRVVSDQIGSPTYTKDLAEAVIKL 197
>gi|153826343|ref|ZP_01979010.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2]
gi|149739912|gb|EDM54099.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2]
Length = 296
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITHS 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|418401112|ref|ZP_12974645.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti
CCNWSX0020]
gi|359504902|gb|EHK77431.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti
CCNWSX0020]
Length = 275
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQ 130
A++ +PD+VV+ AA + E++P++A ++N + + E ++H+STD
Sbjct: 22 AIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGAV--ADAAACLEVPIVHISTDY 79
Query: 131 VYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKS 189
V++G K Y E D AP++VYG SK+A E + E ILR+ +Y SP K+
Sbjct: 80 VFDGSKQGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHLILRTGWVY-----SPFGKN 134
Query: 190 LPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL-LLNVGGP 248
++ I + + E++ D+ P D+ IL ++ R + D+ L ++ G
Sbjct: 135 F-VKTILRLAEEREEIAVVADQRGNPSSAIDLADAILDISARLTTSDQDAAFGLYHLAGS 193
Query: 249 DRVSRVQMAE 258
VSR +A
Sbjct: 194 GVVSRADLAR 203
>gi|266620908|ref|ZP_06113843.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479]
gi|288867425|gb|EFC99723.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479]
Length = 286
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 46 LLDALPHSFVFFDVDLKSGSGFDAVALKFG--QPDVVVNCAALSVPRVCENDPDSAMSIN 103
LL+ P + D+D + AV G +P +VNCA L+ +CE + + A +N
Sbjct: 23 LLENTPVELLLTDLDAVDITDPKAVRDYAGMNRPHFIVNCAGLTDVAMCEENKEEAFKVN 82
Query: 104 VPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFI 162
+ LS + +I LSTD V++G ++ Y E D P VYGKSK+A E F+
Sbjct: 83 ALGA--RNLSVAARMGKARMIQLSTDDVFDGSGQTPYTEFDTPNPQTVYGKSKLAGENFV 140
Query: 163 YEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
E C+ I+RSS I+G + S K L + +G+ + D+ P ++
Sbjct: 141 KEFCNRHIIVRSSWIFGEGS-SYFSKILKLA------GEGKTIYAASDQTAAPTGASELA 193
Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAE 258
+ I+ L D L +V G SR + A+
Sbjct: 194 EKIIELM------DSAPDGLYHVTGQGSCSRFEFAQ 223
>gi|226941909|ref|YP_002796983.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9]
gi|226716836|gb|ACO75974.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M R+L+ G G +G L + L+ PL ++L + + D
Sbjct: 1 MMPPRILLTGANGQVGFELRRALA----------------PLGEVL------AITRHEAD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTEN 118
L+ S + F +P ++VN AA + + E PD+A +N +P L W + +
Sbjct: 39 LQQPSSILPLLDAF-RPRLIVNAAAWTAVDLAEQQPDAAWQVNAVLPGVLAQWAA----D 93
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
++ L+H STD V++G+ S Y E D P++VYG+SK A E+ + I+R+S +
Sbjct: 94 RQARLVHYSTDYVFDGLASRPYDETDPAHPLSVYGQSKWAGEEAVRVAGGAPVIVRTSWV 153
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+G + + L + ++ E++ D+ P + + L W E
Sbjct: 154 FGAHGHNFLKTVL------RLAAEREQLAIVADQTGAPTPASLIADVTAHLVRHWPDEGA 207
Query: 238 QMQL 241
L
Sbjct: 208 TYHL 211
>gi|115377423|ref|ZP_01464627.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1]
gi|310820399|ref|YP_003952757.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
gi|115365580|gb|EAU64611.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1]
gi|309393471|gb|ADO70930.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1]
Length = 302
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 37/264 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD--ALPHSFVFFDVDL 61
++VL++G +G++G+ L Q L E + V + P D L S +
Sbjct: 2 RQVLIIG-SGFIGRRLGQALREAG---HSVVLSSRHPPEGPWAGDWRGLDASRPGAIAEA 57
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+G AV L G D+ CE+ P++AM+ + + + L
Sbjct: 58 VGATGAHAVVLVHGPSDITG----------CESAPEAAMATH--AGIATHLCQEAPTVRK 105
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+LI STD V++G + Y E +P N YG++K+AAE+ + I+R+S++YG +
Sbjct: 106 VLI--STDNVFDGQDTGYDESRAPSPANAYGRAKLAAERVLLAADPGALIVRTSLVYGYE 163
Query: 182 TISPVPKSLPIQW------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
P+ W + + G+ V+ D P+ V D ++ L S
Sbjct: 164 -----PRGPGRGWRNFFMVVADTVRSGQTVQAPVDHWNTPILVDDAAAVLTRLIPGGPSG 218
Query: 236 DKQMQLLLNVGGPDRVSRVQMAEV 259
+L++ GPDRVSR + +
Sbjct: 219 ------VLHLAGPDRVSRFEWGRL 236
>gi|29725996|gb|AAO88927.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV KF +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNKF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|91782042|ref|YP_557248.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
gi|91685996|gb|ABE29196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400]
Length = 305
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL+S +V + QPDV+VN AA + END + A +IN ++ V L+ ++
Sbjct: 43 DLRSPDSIRSVVREV-QPDVIVNPAAYTAVDAAENDAELAYAINGVAAGV--LAEEAKSL 99
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H STD V++G K Y E D + P +VYGKSK+A E+ I E+ + +LR+ +
Sbjct: 100 GGLLVHYSTDYVFDGRKDGPYVETDVVNPQSVYGKSKLAGEQAIAERGATAIVLRTCWVA 159
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCP---VYVRDVVKIILALTNRWLSE 235
G + L + + + + D+ P + DV I+A WL
Sbjct: 160 GAHGSNFAKTMLRLG------RERDSLRVIADQYGAPTTAALIADVTAQIVA--RHWLHG 211
Query: 236 DK--------QMQLLLNVGGPDRVSRVQMAEVDRGVQ---------------------SP 266
D+ + + V RGV+ P
Sbjct: 212 DRAAFASGVYHLAAAGQTSWHGYATEVLQFAAARGVELKVDLARIEPIATADYPLPAPRP 271
Query: 267 ADISMDITKLVQTLNIDPVTYKDGVKLTL 295
A+ +D KL QT I+ ++DGV L
Sbjct: 272 ANSRLDTHKLRQTFGINLPDWRDGVHHLL 300
>gi|122934727|gb|ABM68332.1| RmlD [Anoxybacillus tepidamans]
Length = 282
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LGQ L++ L + + Y SF D+D+ +
Sbjct: 2 KIVVTGANGQLGQELVRQLQQTNFELY---------------------SFTKSDLDITNE 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + V K +PD+++N AA + E + ++A +N L+ E +
Sbjct: 41 SIVNEVITKI-KPDIIINAAAYTKVDQAEIEEETAYLVNAFGQ--RSLAVAAEKVGAKIC 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G + Y+E D+ P+ VYGKSK+ E+ CS + I+R++ +YG
Sbjct: 98 YISTDYVFDGNSAIPYREYDQTNPLGVYGKSKLVGEELTKSLCSRYFIVRTAWVYGEFGQ 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + + E++ +D+ P Y D+ I+ L
Sbjct: 158 NFVKTMLRLA------KEKEEIGVVNDQIGSPTYTVDLAHFIIEL 196
>gi|413958741|ref|ZP_11397980.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
gi|413941321|gb|EKS73281.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
Length = 303
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 41/255 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D A ++N + V L+ + + LL+H STD V++G
Sbjct: 56 KPDVIVNPAAYTAVDQAEADVQIARAVNALAPAV--LAEEAKRLDALLVHYSTDYVFDGT 113
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ------------- 181
+ Y+EED AP NVYG +K+ E+ + + I R+S +YG +
Sbjct: 114 GTRAYREEDATAPQNVYGATKLEGEQAVVTSGAAHFIFRTSWVYGRRGRNFLLTMQKLAR 173
Query: 182 -------------------TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
TI+ + S+ Q + + G + + E R V
Sbjct: 174 ERDELRIVADQIGAPTWSATIAALTASVIAQGVAQGVGSGSSIADWARE------RRGVY 227
Query: 223 KIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
+ + + W + + + P RV + AE + P++ +D++KL + +
Sbjct: 228 HLTSSGSTSWAGFAEAIFAEARLEHPPRVVPIPSAEYPTPARRPSNSRLDLSKLAREFGL 287
Query: 283 DPVTYKDGVKLTLAA 297
P +++ + L L +
Sbjct: 288 TPPDWREALALCLGS 302
>gi|115437410|ref|XP_001217803.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188618|gb|EAU30318.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1018
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 51/310 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ Q + + V +S P +L A DL+
Sbjct: 709 VLVTGATGLLGR---QVFNTFKSSGCLVVGQGYSRANPPTILKA----------DLEKPD 755
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
A+ L +P +VV+CAA P +C+ DPD A +NV ++ L+ T + LI+
Sbjct: 756 DIHAL-LDDVKPQIVVHCAANRSPDLCDKDPDQARRLNVDATRA--LAKETVARNAFLIY 812
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + P N+YG+ K E + E+ + +LR ++YGP
Sbjct: 813 ISTDYVFPGKEGEAPYEVDSPTNPPNLYGQLKRDGEIAVLEETKDTGLGIVLRVPVLYGP 872
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSED- 236
+ +S +D+V S+ E D+ R P DV ++ + +++ E
Sbjct: 873 AKSN--SESAVNTLVDAVQKSQDENARVTMDDWAQRYPTNTEDVARVCRDIIIKYIKERS 930
Query: 237 --KQMQLLLNVGGPDRVSRVQMAEV---------------------DRGVQSPADISMDI 273
KQ+ +L DR+++ ++ E + VQ P D +
Sbjct: 931 RIKQLPKVLQFSSEDRMTKYEICEKLAEIMGVSLGGMIRNQQGNDPNASVQRPYDTHLS- 989
Query: 274 TKLVQTLNID 283
TK +Q L ID
Sbjct: 990 TKALQELGID 999
>gi|425454442|ref|ZP_18834182.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Microcystis aeruginosa PCC
9807]
gi|389804888|emb|CCI15740.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of
dTDP-L-rhamnose synthase [Microcystis aeruginosa PCC
9807]
Length = 291
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 56/252 (22%)
Query: 4 KRVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K+VL++G G +GQ L LQ L E+ + +S + QL+ +
Sbjct: 2 KKVLLIGAKGQVGQELQVTLQSLGEVISIGREELDLTNSEKIRQLIREI----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
PD +VN AA + E +PD A SIN + + ++ E +
Sbjct: 51 ---------------HPDYLVNAAAYTAVDKAETEPDLAYSINAIAPKI--MAESAEKIQ 93
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V++G K+ Y E D P+ VYG+SK+ E+ I S ILR++ +YG
Sbjct: 94 AKFLHISTDYVFDGRKNTPYLETDLTNPLGVYGQSKLRGEEEIKTVNSQAIILRTAWVYG 153
Query: 180 PQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
S ++ ++L G E+++ D+ P + +D+ I
Sbjct: 154 SYGKS--------NFVKTMLKLGKEREELKVVVDQVGSPTWSKDIATAI----------- 194
Query: 237 KQMQLLLNVGGP 248
QLL+NV P
Sbjct: 195 --TQLLINVDNP 204
>gi|238763334|ref|ZP_04624298.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC
33638]
gi|238698433|gb|EEP91186.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC
33638]
Length = 293
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 29/298 (9%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
VL++G TG LG L L+E K +V T S ++ + L + + +VD
Sbjct: 2 NVLILGATGMLGYSLFANLNEY--KQLNVIGTARSMAGKEIYFNKLQENLLL-NVDATDI 58
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
D A+K +PDVV+NC L A+ IN S L + L++ + E I
Sbjct: 59 DSIDN-AIKLAKPDVVINCIGLIKQHEIAKQYVPAIKIN--SLLPHQLAALCDKYEAKYI 115
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V++G Y E D ++YGKSK E LR+SII G + S
Sbjct: 116 HFSTDCVFDGKTGLYNELDLPNSTDIYGKSKYLGE----VNYGRHLTLRTSII-GHELSS 170
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLL-L 243
V ID L + +V F + + K+ L + L ++ L L
Sbjct: 171 AV------SLIDWFLKQQNEVNGFSKAIFSGLPTSYIAKL---LAEKILVDNSLTGLYHL 221
Query: 244 NVGGPDRVSRVQM--------AEVDRGVQSPADISMDITKLVQTLNIDPVTYKDGVKL 293
+V D+ S + + ++++ Q D S+D KL +N +P T+++ ++
Sbjct: 222 SVDPIDKFSLISLVSEIYGHSVKINKSEQLVIDRSLDSKKLRDAINFNPPTWRELIEF 279
>gi|78357226|ref|YP_388675.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio alaskensis G20]
gi|78219631|gb|ABB38980.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio alaskensis G20]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 46/254 (18%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLS----EIEGKPYDVAATHHSTPLPQLLLDALPHSFVF 56
++ K V++ G TG LGQ L+ L+ ++E + A H S L + + H+
Sbjct: 3 VAPKAVVLGGRTGLLGQALVADLTRAGWQVEAHGREDADVHDSAALEKYICS---HA--- 56
Query: 57 FDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
PDV+ N A + E + D+AM +N SL L
Sbjct: 57 --------------------PDVLFNAVAYTQVDKAEEEQDAAMRLN--KSLPALLGRLA 94
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRS 174
L+H STD V+ G K Y E+DE AP ++YG SK+A E+ + + I+RS
Sbjct: 95 CTGNMHLVHYSTDFVFNGRKETPYTEDDETAPQSIYGLSKLAGEQVLLQMNLPRLTIIRS 154
Query: 175 SIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
S ++GP + +Q I + +++ HD+ P Y D LA +R L
Sbjct: 155 SWLFGPG------RGNFVQTILGLCETRQEITVVHDQVGSPTYTPD-----LAAGSRLLV 203
Query: 235 EDKQMQLL-LNVGG 247
E L L+ GG
Sbjct: 204 EKGGTGLFHLSNGG 217
>gi|320040797|gb|EFW22730.1| NAD dependent epimerase/dehydratase [Coccidioides posadasii str.
Silveira]
Length = 315
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 57/323 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLS-----EIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
++ LV G +G LG+ +L E G+ + AA H
Sbjct: 3 QKALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPH-----------------IVK 45
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DL + S +++ + +P VVV+CAA P C+ PD A +NV ++ L+ T
Sbjct: 46 ADLTNPSEIESLLAEV-KPQVVVHCAANRFPDQCDAHPDLARKVNVEATKA--LAKATLQ 102
Query: 119 KENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILR 173
+ LLI++STD V+ G ++ Y+ + P N+YG++K+ E + E +LR
Sbjct: 103 RSILLIYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLR 162
Query: 174 SSIIYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
++YG T S ++ I + + KV+ R P DV ++ + ++
Sbjct: 163 VPVLYGSADTNSESAVNVLIDAVWKAQAADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKY 222
Query: 233 LSEDKQ---MQLLLNVGGPDRVSRVQMAE------------VDR---------GVQSPAD 268
L E ++ +L D+V++ +M E ++R GVQ P D
Sbjct: 223 LGEQERAASFPTILQFSSEDKVTKYEMCERFAEILGLPLSGMERIKQGGTPGNGVQRPFD 282
Query: 269 ISMDITKLVQTLNIDPVTYKDGV 291
+ TK ++ L I PV +D V
Sbjct: 283 THLS-TKALKELGI-PVDTQDFV 303
>gi|421077311|ref|ZP_15538282.1| dTDP-4-dehydrorhamnose reductase [Pelosinus fermentans JBW45]
gi|392524699|gb|EIW47854.1| dTDP-4-dehydrorhamnose reductase [Pelosinus fermentans JBW45]
Length = 281
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 67 FDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
FDAV A+ +PDVV+N AA + E D D+A +N + +S N + L+
Sbjct: 39 FDAVDTAIAIVKPDVVINAAAYTNVEKAEEDCDNAFKVNAIGAENLAISCKKHNSK--LV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
H+STD V++G K Y+E D+ P++VYG+SK EK I + + ILR+S +YG
Sbjct: 97 HISTDYVFDGTKDRPYEEFDQHNPLSVYGRSKSFGEKLIEQVGGKYFILRTSWLYG 152
>gi|383456789|ref|YP_005370778.1| dTDP-4-dehydrorhamnose reductase [Corallococcus coralloides DSM
2259]
gi|380734405|gb|AFE10407.1| dTDP-4-dehydrorhamnose reductase [Corallococcus coralloides DSM
2259]
Length = 299
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A+ +P+ +++ A+++ CE DPD+A + NV ++ ++ L+H+ST
Sbjct: 55 AAAIAQARPEAIIHPASMTEVDACEKDPDAAYAANVHATAAVARAAKLAGAH--LVHVST 112
Query: 129 DQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-PQTISPVP 187
D V++G Y E+ P VY +K AE+ AI R++++YG P P
Sbjct: 113 DYVFDGDAGPYSEDALPNPRGVYALTKHMAEQAARVFAPGCAIARTAVVYGWPAAGRPNF 172
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS 234
+ W+ L KG+ V+ F D+ P + V +++ L R L
Sbjct: 173 GA----WLVGALEKGQPVKLFEDQVVSPSFADSVAAMLVELGERRLG 215
>gi|224826610|ref|ZP_03699711.1| dTDP-4-dehydrorhamnose reductase [Pseudogulbenkiania ferrooxidans
2002]
gi|224601211|gb|EEG07393.1| dTDP-4-dehydrorhamnose reductase [Pseudogulbenkiania ferrooxidans
2002]
Length = 297
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 134/322 (41%), Gaps = 65/322 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++GG+G LG L + L+ + GK + P ++L DL
Sbjct: 2 RILLIGGSGQLGFELRRSLA-LYGKLW--------APGREVL-------------DLSRP 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L+F PD++VN AA + E +P A +N + L+ E L+
Sbjct: 40 DQLAPPVLEFA-PDLIVNAAAYTAVDRAETEPALAERVNAEAPAE--LARLAERLGATLL 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G + Y+E D P++VYG++K E + CS +LR+S +YG
Sbjct: 97 HFSTDYVFDGAGAAPYREGDVTRPLSVYGRTKRDGELAVMNDCSRHYVLRTSWVYG---- 152
Query: 184 SPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------- 231
S+ ++ ++L ++ + + HD+ P + + L +R
Sbjct: 153 -----SVGGNFVKTILRLAAQRDTLNVVHDQVGAPTSAMLIADVSAQLVSRLREGRVLPY 207
Query: 232 ------------WLSEDKQM-QLLLNVGG-----PDRVSRVQMAEVDRGVQSPADISMDI 273
W +++ L +VGG P+ + + A+ + PA+ +D
Sbjct: 208 GLYHLTAAGETSWHGFAREIVGLAQDVGGGLVLKPEAIQAIPAADYPAAAERPANSRLDT 267
Query: 274 TKLVQTLNIDPVTYKDGVKLTL 295
KL L I ++ ++L L
Sbjct: 268 HKLRVALGIVLPDWRHHLQLVL 289
>gi|407461633|ref|YP_006772950.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045255|gb|AFS80008.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosopumilus
koreensis AR1]
Length = 304
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 27/258 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+++ ++L++GGTG +G L+ K +D+ T+ T LP L L + + +
Sbjct: 6 INRPKLLILGGTGLVGS----TLASYAQKIFDIHLTY-CTNLP---LSTLSSTKISLPDE 57
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L S + + +++ PDV+V+ + C+ + D A ++V +L ++ F
Sbjct: 58 L---SKLENLIVQY-DPDVIVHTVSHPSVDWCQENRDLANFLHV--NLTENIAKFASKIN 111
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LI+LSTD V++G ++ Y E D P+N YG +K+ AEK + + N +LR ++IYG
Sbjct: 112 STLIYLSTDWVFDGTRNNKYTENDSTNPINHYGVTKLLAEKIVLDYPQN-VVLRPAVIYG 170
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
KS WI L + + V+ D+ P V D+ I+ + + +
Sbjct: 171 WH-----KKSRFTNWIIDTLKEKKYVDPHVDQYATPTLVDDLALAIIKII------ENKS 219
Query: 240 QLLLNVGGPDRVSRVQMA 257
L + G V+R + A
Sbjct: 220 SGLFHSTGKSCVNRFEFA 237
>gi|225374844|ref|ZP_03752065.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM
16841]
gi|225213305|gb|EEG95659.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM
16841]
Length = 285
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 72 LKFGQ---PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
L+FG+ PD+++NC+ ++ CE +P A +N + L+ + ++ LST
Sbjct: 45 LRFGEMNRPDIIINCSGMTDISSCEENPSQAFKVNALGA--RNLAIVAAKMQAKMVQLST 102
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G + Y E D P VYGKSK+A E ++ E + I+RS+ +YG
Sbjct: 103 DDVFDGKSTEPYTEFDITNPGTVYGKSKLAGENYVKEFTTKHFIVRSTWVYGKGQ----- 157
Query: 188 KSLPIQWIDSVLSK---GEKVEFFHDECRCPVYVRDVVKIILALTN 230
+I+ L K GE++ D+ P ++ + +L L +
Sbjct: 158 -----NFINGFLKKVDAGEQLSIASDQFGSPTSANELARFLLHLVH 198
>gi|23016840|ref|ZP_00056592.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum
magnetotacticum MS-1]
Length = 292
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 128/323 (39%), Gaps = 70/323 (21%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G + +G+HL L P T+ S +L G
Sbjct: 3 KLLILGASSSVGRHLWTRLG-----PDQAIGTYRSH-------------------ELAGG 38
Query: 65 SGFDAVA------LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
FD+V ++ G+ V A P C DP + +NV + ++ E+
Sbjct: 39 RRFDSVTQSIAQVIRPGESSHAVILLADPQPDSCVKDPQVSHRLNVVA-----MTRLVED 93
Query: 119 KENLLI---HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
L I ST+ V++GVK Y E DE P+ +YG+ K E F+ AILR +
Sbjct: 94 LWGLGITPIFASTEFVFDGVKGDYVETDEARPILLYGRQKKEVEDFLLASGKPHAILRFA 153
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + P +L WI L + D+ PV+V DV + IL + R L
Sbjct: 154 KVYGTE---PGDGTLFSAWIAQALGGATAMRCAADQVFSPVHVGDVGEAILRVAERDLGG 210
Query: 236 DKQMQLLLNVGGPDRVSRVQMAE------VDRGV-----------------QSPADISMD 272
+ ++ G R +R+++ E V RG + P D+SM
Sbjct: 211 ------IYHLSGNQRFNRLELLEMTLAALVRRGYPRIAVEPCSIDDFNLPERRPKDVSMR 264
Query: 273 ITKLVQTLNIDPVTYKDGVKLTL 295
KL+ + + +D + + L
Sbjct: 265 AEKLIAATGMTMMNPEDAIDVLL 287
>gi|399021056|ref|ZP_10723175.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum sp. CF444]
gi|398093040|gb|EJL83430.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum sp. CF444]
Length = 315
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 42/183 (22%)
Query: 5 RVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++L+ G +G +G L LQGL EI SF +DL
Sbjct: 2 KILLTGQSGQIGNELALSLQGLGEI-------------------------ISFSRQQMDL 36
Query: 62 KSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
+ D + A++ +PD++VN AA + E++P+ AM IN + V E
Sbjct: 37 ---ADLDQIRDAIRATRPDLIVNPAAYTAVVKAESEPELAMRINGEAPGV-----IAEEA 88
Query: 120 ENL---LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ L ++H STD V++G + + Y E P+NVYG+SK A E+ I C + ILR+S
Sbjct: 89 QRLGAPMVHYSTDYVFDGTRDTPYDEAAPTHPINVYGQSKCAGEEAIARHCEAYWILRTS 148
Query: 176 IIY 178
+Y
Sbjct: 149 WVY 151
>gi|378776703|ref|YP_005185140.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|364507517|gb|AEW51041.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 294
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 66/316 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E + Y A T D+
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSEHEVY--ACTR----------------------DILDC 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + V L +PD+++N AA + E++PD A +N + V L ++ K
Sbjct: 38 SKLERVHDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCHLVNYCSFKNIP 95
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 96 LIHLSTDYVFDGKKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQ 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------------- 228
+ V L ++ S +++ D+ P RD+ +++ +
Sbjct: 156 GKNFVKTIL------NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKIRHSSFDYWG 209
Query: 229 ---------------TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDI 273
N +L+ K+ QLLL + ++ ++ E P + +D
Sbjct: 210 LYHYAGQGVTNWHEFANVFLNMAKEKQLLLTLTD---LNPIKSEEYPTRATRPKNSVLDT 266
Query: 274 TKLVQTLNIDPVTYKD 289
TK+ L I ++K+
Sbjct: 267 TKIETILGIKSCSWKN 282
>gi|413962389|ref|ZP_11401616.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
gi|413928221|gb|EKS67509.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. SJ98]
Length = 312
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 21/228 (9%)
Query: 6 VLVVGGTGYLGQHLLQGL-SEIEGKPYDVAAT-HHSTPLPQLLLDALPHSFV-FFDVDLK 62
V ++G +G LG+ + L S + + V T H + LD L H V F DL
Sbjct: 9 VALIGASGLLGRAVATELASAASTQTWRVVHTAHRRADAASVKLDLLDHDAVRAFVRDLA 68
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
PD +V AA P +CENDP A ++NV + V +++
Sbjct: 69 --------------PDAIVVAAAERRPDICENDPALARALNVEALSV--IATEARALGTW 112
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
++ +STD V++G Y +D AP+N YG+SK+ E+ + +LR ++YGP T
Sbjct: 113 VLSISTDYVFDGASPPYLPDDAPAPLNAYGQSKLDGERALLASDPMSCVLRLPLLYGPFT 172
Query: 183 --ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
SL + S + G R P Y DV +I +
Sbjct: 173 DWSESAVTSLTPAIVKSSEAAGAPASMDAWATRYPTYTPDVAVVIRGM 220
>gi|228946125|ref|ZP_04108460.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813538|gb|EEM59824.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 282
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LGQ L+Q LS + Y V T LD ++
Sbjct: 2 KILITGVDGQLGQTLMQVLSRTHHELYGVNRTK---------LDITN--------KIRVC 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D V +PDV+V+CAA + E D A +NV + +++ + +
Sbjct: 45 SYIDRV-----KPDVIVHCAAFTNVDGAEKDKGLAYEVNVLGT--KYIAQAAGRIKCKFV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y ED P+N+YG++K+A E + + N I+R+S I+G
Sbjct: 98 YISTDYVFDGEKHTPYNLEDRPNPLNIYGETKLAGEHIVTKYTKNHFIIRTSWIFGKGDG 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII 225
+ K I + S +V D+ P Y D+ K I
Sbjct: 158 HFIAK------IGKIASLYGEVRVVSDQFGSPTYALDLAKFI 193
>gi|356960069|ref|ZP_09063051.1| dtdp-4-dehydrorhamnose reductase [gamma proteobacterium SCGC
AAA001-B15]
Length = 294
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+G G LG+ + + GK SF+F D
Sbjct: 2 KILVIGENGQLGK----SIKNVIGKKKS------------------NDSFIFVGRDQFDL 39
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S ++A K + DV+VNCAA + E + ++A IN + V ++ + +
Sbjct: 40 SNNQSIANFFKSDRFDVIVNCAAFTSVDKAELEIETADKINHLA--VKQIAEIANHHKTK 97
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGP 180
LIH+STD V++G Y E D+ P+NVYGKSK+A E+ I+ N A I+R+S +Y
Sbjct: 98 LIHISTDYVFDGKSDNPYSESDKTNPINVYGKSKLAGEQAIFLAMPNNAIIIRTSWVYSE 157
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTN--RWLSE 235
++D++L G++ E + D+ P Y ++ IL + N ++ S
Sbjct: 158 ---------FGNNFVDTILKLGKEQEELNIVCDQLGNPTYANNLAIAILQIINNEQFYSF 208
Query: 236 DKQMQLL 242
+K Q+
Sbjct: 209 NKGTQIF 215
>gi|421140696|ref|ZP_15600693.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens BBc6R8]
gi|404508150|gb|EKA22123.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens BBc6R8]
Length = 293
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + + F E + L LIH STD V+
Sbjct: 54 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGI-----FAEEAKALGIPLIHYSTDYVF 108
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 109 DGSKAAPYNEDDATNPLGVYGASKLAGEQAIAAVGGEHLILRTSWVY-----STHGKNFL 163
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ + +L + ++ D+ P + + AL RW
Sbjct: 164 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIANSTRALIERW 203
>gi|168216435|ref|ZP_02642060.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC
8239]
gi|182381469|gb|EDT78948.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC
8239]
Length = 294
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L + + + V+ ++ + L +D L D+ S
Sbjct: 2 KILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKL---------DITSL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PDVV+NCAA + CEN+ D A +N S L+ E L+
Sbjct: 53 ENVKNV-LNEEKPDVVINCAAATNVDGCENNEDFAFKVN--SLGARNLAMVCEEIGAKLV 109
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V+ GV + E D AP +VYGK+K+ E ++ E CS + I+R++ +YG
Sbjct: 110 QVSTDYVFSGVGEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYG 165
>gi|228938438|ref|ZP_04101047.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228971317|ref|ZP_04131944.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977927|ref|ZP_04138308.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407]
gi|384185236|ref|YP_005571132.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410673529|ref|YP_006925900.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus
thuringiensis Bt407]
gi|452197546|ref|YP_007477627.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228781844|gb|EEM30041.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407]
gi|228788353|gb|EEM36305.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821175|gb|EEM67191.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938945|gb|AEA14841.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409172658|gb|AFV16963.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus
thuringiensis Bt407]
gi|452102939|gb|AGF99878.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 284
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELNSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYGEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|33637044|gb|AAQ23682.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus]
Length = 281
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PDVV++ AA + + E++PD A IN + ++S E L+++STD V++G
Sbjct: 51 NPDVVIHAAAYTKVDLAESEPDQAFLINAYGTRNVAVAS--EAVGAKLVYISTDYVFDGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+ Y E P++VYGKSK+A E+F+ + S F I+R+S +YG + V L +
Sbjct: 109 ATTPYNEFALTNPLSVYGKSKLAGEQFVRDLHSKFFIVRTSWVYGKHGNNFVKTMLRLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++ +D+ CP Y D+ IL +
Sbjct: 168 -----QERNELMVVNDQVGCPTYTVDLANCILEI 196
>gi|398788405|ref|ZP_10550564.1| methionine adenosyltransferase [Streptomyces auratus AGR0001]
gi|396992228|gb|EJJ03342.1| methionine adenosyltransferase [Streptomyces auratus AGR0001]
Length = 278
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 44/269 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G +GY+G L Q LS + V T +P L+ VDL+
Sbjct: 2 KILLLGASGYVGGALWQSLS----ARHTVVGTCSRRAVPGLV-----------TVDLRDE 46
Query: 65 SGFDAVALKFGQP-DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ A+ GQ D+V++ A L E P A ++NV S V L + + +
Sbjct: 47 AALCAL---LGQGFDLVIHAAGLVDLASAEAQPALAHALNVRS--VEALRTAVRDTPTKI 101
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ LS+D V++G Y EED +PVNVYG++K AAE + + ++R ++YG
Sbjct: 102 LLLSSDNVFDGTGEVYTEEDPRSPVNVYGRTKCAAEDALLGPGGHL-VVRIPLVYGR--- 157
Query: 184 SPVPKSLPIQWIDSVLSK--GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP W D +++ G + D PVY+ + + L +R Q
Sbjct: 158 SP--------WADRFMARFSGPVTQAQTDVVCAPVYLPSLAPALEELWDR--------QG 201
Query: 242 LLNVGGPDRVSRVQ-MAEVDRGVQSPADI 269
LL+ G + V+R M+ V ++ P +
Sbjct: 202 LLHFAGAEVVTRFALMSRVAEALRLPTRV 230
>gi|317132492|ref|YP_004091806.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3]
gi|315470471|gb|ADU27075.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3]
Length = 283
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++ G LG + S K YDV+A F D+D+
Sbjct: 2 RMLIIAADGQLGTDAVSYFS----KKYDVSA------------------FKTADMDVTDP 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ L +PD V+NCAA++ CE+ + A +N + + L++ L+
Sbjct: 40 IRVNGAILAV-KPDAVLNCAAMTNVDGCESQAEQAYRVNAYGAGLVALAAARVGAH--LV 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G S Y E D P NVYG SK++ E+ + C N AILR++ +YGP
Sbjct: 97 HISTDYVFAGDGSRPYVETDSPDPQNVYGASKLSGERHVQALCPNSAILRTAWLYGPHGN 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + KGE V D+ P +++++I A+
Sbjct: 157 NFVKTMLKLA------EKGE-VGVVTDQVGNPTSTFELIRMIDAV 194
>gi|384081764|ref|ZP_09992939.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium HIMB30]
Length = 318
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLST 128
A++ +PD VVNC S E+DP IN +P SL F + LI LST
Sbjct: 66 AIRMRRPDFVVNCMVESGVDRAESDPTECRQINHDLPVSLAIACREF----DATLIQLST 121
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D +++G K Y E+D P+N++G++++ AE+ I ILR S ++ P S V
Sbjct: 122 DYIFDGQKDIAYFEDDAPNPLNLFGQTRLEAERDIENLLDQHIILRVSHLFAPSGNSFVT 181
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
L I+S L DE CP + D+ ++I A+ ++
Sbjct: 182 NLLDRARIESELP------MIQDERGCPTSIYDIGRVISAVIDQ 219
>gi|167580721|ref|ZP_02373595.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
thailandensis TXDOH]
Length = 280
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ LL S + + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLLDACS----RRWRTLGTSTRDGADIVFSLARAEAFPYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACAKDYETAFQVNVTGTLT--LIRGVLARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG+ K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGEMKRRVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRTLAAP 231
>gi|15615927|ref|NP_244231.1| spore coat polysaccharide synthesis dTDP-4-dehydrorhamnose
reductase [Bacillus halodurans C-125]
gi|10175988|dbj|BAB07084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose
reductase) [Bacillus halodurans C-125]
Length = 283
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD +++ AA + CE++ A +N + ++ V + T K LI++STD V++G
Sbjct: 52 PDWIIHVAAFTAVDQCEDEQRKAYHVNGLGAANVARAARETGAK---LIYISTDYVFDGN 108
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K S Y+ D P+NVYG SK E+ + + I R+S +YG + V L
Sbjct: 109 KNSPYETCDLPNPLNVYGNSKWLGERLVQKYVKTCTIARTSWLYGHYGGNFVKTML---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+L KGE +E D+ CP YV D+V + AL +
Sbjct: 165 --RLLRKGEPIEVVADQVGCPTYVNDLVYYLFALMEK 199
>gi|444909352|ref|ZP_21229543.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
gi|444720301|gb|ELW61085.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
Length = 311
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 33/262 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VL++G +G++GQ L + L + G +++ H L Q L + +
Sbjct: 2 RHVLIIG-SGFIGQRLGRALRD-AGLEVTLSSRHWPPGLGQEPWRCLDATRPGAIAEAVG 59
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+G AV L G D+ CE+ P++AM+ + + + L + +L
Sbjct: 60 ATGAHAVVLVHGPSDITG----------CESAPEAAMATH--AGIAARLCQEAPSVRKVL 107
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
I STD V++G + Y E P N YG++K+AAE + ++R+S++YG +
Sbjct: 108 I--STDNVFDGQDTSYDESRSPNPANAYGRAKLAAEHVLLSADPGALVVRTSLVYGYE-- 163
Query: 184 SPVPKSLPIQW------IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
P+ W + + G+ V+ D P+ V D ++ L
Sbjct: 164 ---PQGPGRGWRNFFMVVAEAVRAGQPVQAPVDHWNTPILVDDAAAVLARLI------PG 214
Query: 238 QMQLLLNVGGPDRVSRVQMAEV 259
+ LL++ GPDR SR + ++
Sbjct: 215 RQAGLLHLAGPDRASRFEWGQL 236
>gi|24940614|gb|AAN65241.1|AF329398_31 dTDP-4-keto-6-deoxyhexose reductase [Streptomyces roseochromogenes
subsp. oscitans]
Length = 288
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 4 KRVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
R LV G G LG+ L LQGL+E VA T D+D
Sbjct: 3 NRWLVTGAAGMLGRDLVGVLQGLNESV-----VAVTRQ-------------------DLD 38
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
+ AV ++ QP +VNCAA + R E + + ++ + V L+S ++
Sbjct: 39 ITDRFSVRAVVSRY-QPTTIVNCAAWT--RFPEAEVSESEALLINGRGVRELASICSDRS 95
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKC-SNFAILRSSIIY 178
L+HLSTD V++G Y E +P+N YG++K+A E+ + E + I+R++ +Y
Sbjct: 96 IRLVHLSTDYVFDGTSCQPYAESAATSPINAYGRTKLAGEQAVLELLPDDGTIVRTAWLY 155
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G + + K + ++ + + V+ D+ P + D+ + I+AL
Sbjct: 156 GRHGTNFIRKMVRLEQMR------KTVDVVDDQWGQPTWTVDLAQQIVAL 199
>gi|395797221|ref|ZP_10476512.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Ag1]
gi|395338645|gb|EJF70495.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Ag1]
Length = 289
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + + F E + L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGI-----FAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKAAPYNEDDATNPLGVYGASKLAGEQAIAAIGGEHLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ + +L + ++ D+ P + + AL RW
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGTIANSTRALIERW 199
>gi|440632620|gb|ELR02539.1| hypothetical protein GMDG_01064 [Geomyces destructans 20631-21]
Length = 318
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 141/324 (43%), Gaps = 58/324 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
MS + LV G +G LG+ + + K + V T + P +L VD
Sbjct: 1 MSSQTALVTGASGLLGRAVTTAFNR---KSWSVTGTGLTRANPPAILA----------VD 47
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
L + A +L +P VVV+CAA P C+ DP +A ++NV ++ L+ T +
Sbjct: 48 LGDSAAV-AKSLDDVKPSVVVHCAANRFPDSCDRDPTAARALNVAATRS--LAEQTAQRG 104
Query: 121 NLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------IL 172
+LI++STD V+ G ++ Y+ AP N+YG +K+ EK + E + +L
Sbjct: 105 IVLIYISTDYVFSGAPGEAPYETSATPAPTNLYGMTKLEGEKAVGEAYAAAGGKGRGVVL 164
Query: 173 RSSIIYGP--QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDECRCPVYVRDVVKIILALT 229
R ++YG + SL +D+V ++ EKV R P DV +++ +
Sbjct: 165 RVPVLYGKADKHADSAVNSL----VDAVWKAQKEKVVMDGWAKRFPTNTEDVGRVVADIA 220
Query: 230 NRWLSE-----DKQMQLLLNVGGPDRVSRVQMAEV---------------------DRGV 263
++S+ + + +L D ++ +M E+ + GV
Sbjct: 221 TLYISKIEAGRAEGLPAILQFSAEDLYTKYEMCELFAHLMGLGLEKMEKDVRGNEGNTGV 280
Query: 264 QSPADISMDITKLVQTLNIDPVTY 287
Q P D + T+ ++ L I+ T+
Sbjct: 281 QRPFDCHLS-TRALKELGIEVHTH 303
>gi|153809621|ref|ZP_01962289.1| hypothetical protein RUMOBE_00002 [Ruminococcus obeum ATCC 29174]
gi|149833799|gb|EDM88879.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum ATCC 29174]
Length = 283
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 72 LKFG---QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
+ FG +PDV++NC ++ CE +P+ A +N + LS + ++ LST
Sbjct: 45 INFGTVNRPDVIINCTGITDTDECEANPEHAYRVNALGA--RNLSIVARKCGSKIVQLST 102
Query: 129 DQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y E D+ P+ VYG+SK A E ++ E ++RS+ +YG + V
Sbjct: 103 DDVFDGQSKKPYTEFDDTNPLTVYGRSKRAGENYVKEFTHKHFVIRSNWVYGHGGHNFVN 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TNRW 232
+ L + G + D+ P +D+ K+I+ L TN +
Sbjct: 163 RVL------AAAEAGNGLSVASDQFGSPTSAKDLAKMIMYLISTNEY 203
>gi|406938573|gb|EKD71777.1| hypothetical protein ACD_46C00101G0002 [uncultured bacterium]
Length = 292
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ GG+G L Q + ++ AA H L D L D+ +
Sbjct: 7 KILLTGGSGQLAQAIFS---------HNNAANFH---LKMCSRDEL---------DITNM 45
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ F P++++NCAA + EN A IN + L+ + + L+
Sbjct: 46 ASISRAIQDFS-PEIIINCAAYTAVDQAENSRGDAEKINHLGA--KNLAISCKKNQIFLL 102
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
HLSTD V+ G+K S Y E+D P+N+YG+SK+A E I E N+ ILR +
Sbjct: 103 HLSTDYVFNGLKLSPYIEDDLAQPINIYGESKLAGENAIREYGENYVILR---------V 153
Query: 184 SPVPKSLPIQWIDSVLS---KGEKVEFFHDECRCPVYVRDVV 222
S V ++ ++L + EK+ +D+ CP D+
Sbjct: 154 SGVVSEFGHNFLKTMLKLAREREKLRIVNDQITCPTAADDIA 195
>gi|423382729|ref|ZP_17359985.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG1X1-2]
gi|423530811|ref|ZP_17507256.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuB1-1]
gi|401644402|gb|EJS62093.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG1X1-2]
gi|402445848|gb|EJV77715.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuB1-1]
Length = 284
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELNSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|430745183|ref|YP_007204312.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
gi|430016903|gb|AGA28617.1| dTDP-4-dehydrorhamnose reductase [Singulisphaera acidiphila DSM
18658]
Length = 313
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 9 VGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL--LLDALPHSFVFFDVDLKSGSG 66
+GG+G LG LL+ L+E + +D A T +T P L L A + +
Sbjct: 17 IGGSGQLGGWLLRVLAE---RGHDAAGTFATTAFPGLTPLDAADSAAAADW--------- 64
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
++ P VV A + CE DP A + NV L L+ ++
Sbjct: 65 -----VRSQNPSVVFYPAGFTWVDGCERDPGKARAANVEQPLN--LARAAAEVGARFVYF 117
Query: 127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEK-FIYEKCSNFAILRSSIIYGPQTISP 185
STD V++G Y E P++VYG++K+ AE+ + R++ +YGP+
Sbjct: 118 STDYVFDGQDGPYAESAAPRPLSVYGQAKLEAEQALADALGDLLLVARTTWVYGPERQG- 176
Query: 186 VPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNV 245
K+ Q + LS+G + D+ P Y DV + ++ L + S L++V
Sbjct: 177 --KNFAYQ-LAKALSEGRSLPCPSDQVSTPSYGPDVAQAMVRLIEQGRSG------LVHV 227
Query: 246 GGPDRVSRVQMAEV 259
GPD + RV A+
Sbjct: 228 AGPDLMDRVAFAQA 241
>gi|291568777|dbj|BAI91049.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis NIES-39]
Length = 292
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VVN AA + E + D A +IN + + L++ ++ LIH+STD V++G
Sbjct: 50 KPHIVVNAAAYTAVDKAETETDLATAINGIAPGI--LAAESQRINAKLIHVSTDYVFDGT 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ YG SK+A E+ I +N+AI+R++ +YG K++
Sbjct: 108 QSHPYVETDPTNPLGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTM---- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVG 246
+ + E++ D+ P + D+ I+ L + SE + N G
Sbjct: 164 -LRLSREREELRVVMDQVGTPTWTGDLATAIVQLIPQLNSETSGIYHYTNSG 214
>gi|228951700|ref|ZP_04113802.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|423423401|ref|ZP_17400432.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3X2-2]
gi|423505086|ref|ZP_17481677.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HD73]
gi|449088104|ref|YP_007420545.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228807985|gb|EEM54502.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|401115458|gb|EJQ23308.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus BAG3X2-2]
gi|402454485|gb|EJV86276.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HD73]
gi|449021861|gb|AGE77024.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 284
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + ++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERNEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|358367893|dbj|GAA84511.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
kawachii IFO 4308]
Length = 324
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G TG LG+ + V +S +P + A DL+
Sbjct: 15 VLVTGATGLLGRQVFNTFKH---SGCLVVGQGYSRAIPPTIQKA----------DLEKEE 61
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ L +P +V++CAA P +C+ +PD A +NV ++ + L+ T + LL++
Sbjct: 62 DIKNL-LNEAKPQIVIHCAANRFPDLCDQNPDQARRVNVDATRI--LAEETARRGALLVY 118
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + + P N+YG+ K E + E + +LR ++YG
Sbjct: 119 ISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGELAVLEATKDTGLGIVLRVPVLYG- 177
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDK 237
T +S ID+V ++ E D+ R P DV ++ + +++ E +
Sbjct: 178 -TAKENSESAVNTLIDAVYKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYVKERQ 236
Query: 238 QMQLL---LNVGGPDRVSRVQMAE 258
++Q L L DR+++ ++ E
Sbjct: 237 RIQELPKILQFSSEDRMTKYEICE 260
>gi|357009983|ref|ZP_09074982.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus elgii B69]
Length = 284
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 30/229 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+ V G +G LG L+ S ++ K Y+V T ++D+
Sbjct: 3 IFVTGASGQLGTDLV---SLLKTKGYEVFGTSSK------------------ELDITDTH 41
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ + QP+++++ AA + E D D A +IN + +++ + LI+
Sbjct: 42 AVKSLIAEDKQPNIIIHSAAYTKVDQAEQDSDEAYAINAYGTRNVAMAARACGAK--LIY 99
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V++G Y E ++P +VYGKSK+A E+F+ E ILR+S ++G +
Sbjct: 100 ISTDYVFDGTSKVPYNEFAPVSPQSVYGKSKLAGEQFVREWVPQHYILRTSWVFGKHGSN 159
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
V L + ++ HD+ P Y D+ + IL L ++ L
Sbjct: 160 FVSTMLKLA------EDRTQLNVVHDQFGSPTYTVDLAEFILQLFDKEL 202
>gi|425445392|ref|ZP_18825424.1| dTDP-4-dehydrorhamnose reductase [Microcystis aeruginosa PCC 9443]
gi|389734618|emb|CCI01747.1| dTDP-4-dehydrorhamnose reductase [Microcystis aeruginosa PCC 9443]
Length = 292
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 60/277 (21%)
Query: 4 KRVLVVGGTGYLGQHL---LQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
K+VL++G G +GQ L LQ L E+ + +S + QL+ +
Sbjct: 2 KKVLLIGAKGQVGQELQVTLQSLGEVISIGREELDLTNSEKISQLIREI----------- 50
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
PD +VN AA + E +PD A SIN + + ++ E +
Sbjct: 51 ---------------HPDYLVNAAAYTAVDKAEIEPDLAYSINAIAPKI--MAESAEKIQ 93
Query: 121 NLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+H+STD V++G K+ Y E D P+ VYG+SK+ E+ I S ILR++ +YG
Sbjct: 94 AKFLHISTDYVFDGRKNTPYLETDLTNPLGVYGQSKLRGEEEIKTVNSQAIILRTAWVYG 153
Query: 180 PQTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
S ++ ++L G E+++ D+ P + +D+ I
Sbjct: 154 SYGKS--------NFVKTMLRLGKEREELKVVVDQVGSPTWAKDIATAI----------- 194
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDI 273
QLL+NV P + + GV S D++ I
Sbjct: 195 --TQLLINVDNPTGIYNF----TNSGVASWFDLTKAI 225
>gi|84386902|ref|ZP_00989926.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01]
gi|84378192|gb|EAP95051.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01]
Length = 293
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ G G +G L+Q LS E + + AL + D+ +
Sbjct: 2 RILITGCYGQVGSCLIQQLSNNE----------------NITVRALDREHL----DITNH 41
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+A +F +P +++N AA + E + D + +IN +L+ +N ++
Sbjct: 42 DAVNAAVAEF-EPSIIINAAAHTAVDKAEEEVDLSYAINRDGP--KYLAQAAQNVGAAIL 98
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG K+ Y E D P VYG+SK+A E + E C ILR++ ++G
Sbjct: 99 HISTDYVFEGNKAGEYVETDATNPQGVYGESKLAGEIEVAEACEKHIILRTAWVFGESGN 158
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L + LS D+ P Y D+ ++ + R
Sbjct: 159 NFVKTMLRLGENRDALS------IVGDQFGGPTYAGDIANALIQIAKR 200
>gi|409440325|ref|ZP_11267337.1| dTDP-4-dehydrorhamnose reductase subunit,NAD(P)-binding, of
dTDP-L-rhamnose synthase [Rhizobium mesoamericanum
STM3625]
gi|408747927|emb|CCM78521.1| dTDP-4-dehydrorhamnose reductase subunit,NAD(P)-binding, of
dTDP-L-rhamnose synthase [Rhizobium mesoamericanum
STM3625]
Length = 298
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+DL+S A L+ PD++VN AA + + E + D A IN + V ++SF +
Sbjct: 34 LDLESTDKI-AATLEAHAPDLIVNAAAWTKVDLAETESDRAFRINADA--VATIASFAQA 90
Query: 119 KENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
L+H STD V++G K Y E DE P++VYG+SK A E+ + F ++R+S +
Sbjct: 91 HGATLVHYSTDYVFDGRKQDPYVETDEANPLSVYGRSKRAGERAVQTSGCKFILMRTSWV 150
Query: 178 YGPQ 181
+ +
Sbjct: 151 FSAE 154
>gi|52840994|ref|YP_094793.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296784|ref|YP_123153.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str.
Paris]
gi|6688598|emb|CAB65207.1| RmlD protein [Legionella pneumophila]
gi|52628105|gb|AAU26846.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53750569|emb|CAH11971.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str.
Paris]
Length = 294
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 66/316 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E + Y A T D+
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSEHEVY--ACTR----------------------DILDC 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + V L +PD+++N AA + E++PD A +N + V L ++ K
Sbjct: 38 SKLERVHDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCRLVNYCTLKNVP 95
Query: 123 LIHLSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 96 LIHLSTDYVFDGEKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQ 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------------- 228
+ V L ++ S +++ D+ P RD+ +++ +
Sbjct: 156 GKNFVKTIL------NLASSRKELNIVSDQSGRPTSARDIARVLFEIVQKIRHSSFDYWG 209
Query: 229 ---------------TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDI 273
N +L+ K+ QLLL + ++ ++ E P + +D
Sbjct: 210 LYHYAGQGVTNWHEFANVFLNMAKEKQLLLTLTD---LNPIKSQEYPTRATRPKNSVLDT 266
Query: 274 TKLVQTLNIDPVTYKD 289
TK+ L I ++K+
Sbjct: 267 TKIETILGIKSCSWKN 282
>gi|282898611|ref|ZP_06306599.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
gi|281196479|gb|EFA71388.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis
raciborskii CS-505]
Length = 303
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E +PD AMSIN + + L+ + ++H STD V++G
Sbjct: 50 KPDLIVNPAAYTAVDRAELEPDLAMSINGVAPGI--LAEEAKRLGAAIVHYSTDYVFDGN 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++ YKE D P NVYGK+K+A EK I +N I R+S +YG
Sbjct: 108 QNTPYKENDPTFPQNVYGKTKLAGEKSIQAVGTNHLIFRTSWVYG 152
>gi|223937497|ref|ZP_03629401.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
gi|223893848|gb|EEF60305.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514]
Length = 296
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV+GG+G +G H+L+ + T+ +PL L+ P K
Sbjct: 2 KVLVIGGSGLVGSHVLKAAL---AAGHQAIGTYRRSPLSGLV----PLDAGDAAAAGK-- 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
L +PD VV+ A + CE+DP A + N P++L + + +
Sbjct: 53 ------LLDQEKPDAVVHAAGWTWVDGCEDDPKRAFAENAEQPANL----ARLCQKRGIH 102
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAIL-RSSIIYGPQ 181
+ ST +++G+ Y E+ + P+NVY +SK E+ + ++ A+L R +YG +
Sbjct: 103 FTYFSTSYIFDGLDGPYDEDAKPNPINVYSQSKWEGEQRVQQETDGTALLPRIICVYGAE 162
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
K+ Q + + L +G+ + D+C P Y D+ + ++ L +K+ +
Sbjct: 163 VQK---KNFAYQ-VWNALREGKALTLPSDQCGNPTYAGDIARWLITLL------EKRERG 212
Query: 242 LLNVGGP-DRVSRVQMAE 258
++GGP +R + AE
Sbjct: 213 PWHLGGPWPTCTRPEWAE 230
>gi|332671009|ref|YP_004454017.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484]
gi|332340047|gb|AEE46630.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484]
Length = 282
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VK 136
DVVVN AA + V + + D A + +V ++ V L+ T + L+H+STD V++G +
Sbjct: 51 DVVVNTAAYTA--VDQAETDEARAFDVNATGVGNLARVTRDIGARLVHVSTDYVFDGHAQ 108
Query: 137 SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
+ Y E+ +AP + YG++K A E + + + ILR++ +YG + PK+ I
Sbjct: 109 TPYDEDAPLAPRSAYGRTKAAGEWAVRAEQPDHLILRTAWLYGAHG-ACFPKT-----IA 162
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
V ++ +E D+ P + RDV +++ L
Sbjct: 163 RVAAERGGLEVVADQVGQPTWTRDVADLVVRL 194
>gi|300717502|ref|YP_003742305.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661]
gi|299063338|emb|CAX60458.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661]
Length = 295
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G +G L + L+ PL L+ AL + DL +
Sbjct: 2 KILLLGKNGQVGWELQRALA----------------PLGTLI--ALDRHSTTYCGDLSNA 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
G A L +PDV+VN AA + E++P+ A +N S +++ E LL+
Sbjct: 44 EGIAATILAI-KPDVIVNAAAHTAVDKAESEPEVAAVLNTSSVAA--MAAAAEEVGALLV 100
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H STD V+ G + + E D P++VYGK+K E+ I CSN+ I R+S +Y +
Sbjct: 101 HYSTDYVFNGQGEQPWTEADVTEPLSVYGKTKRDGEEAIAAACSNYLIFRTSWVYAAK 158
>gi|262192434|ref|ZP_06050586.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93]
gi|262031698|gb|EEY50284.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93]
Length = 296
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHSLVQQLSTMKEVEF-------------LAVDR-------DQLDITHP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ +++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAANKVGAVIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACLRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|423334563|ref|ZP_17312342.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis
CL03T12C09]
gi|409225754|gb|EKN18672.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis
CL03T12C09]
Length = 287
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 40/234 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G G LG + +S+ G ++F+F D+D
Sbjct: 2 KTVLVTGANGQLGNSIYARISQYPG-----------------------YNFLFTDIDTLD 38
Query: 64 GSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+AV + DV V+NCAA + E D M IN V L
Sbjct: 39 ICDKEAVRKYVLENDVQYVMNCAAYTAVDKAEEHEDLCMRIN--RDAVRNLGEAAHAVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D PV+VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 KVIHVSTDYVFDGTSCRPYLESDATCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +VL G +++ F D+ P Y D+ +L + R
Sbjct: 155 -------SEYGNNFMKTVLRLGKERDELRFIFDQVGTPTYAGDLAVAMLTVLER 201
>gi|312880524|ref|ZP_07740324.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260]
gi|310783815|gb|EFQ24213.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260]
Length = 301
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPY-DVAATHHSTPLPQLLLDALPHSFVFFDV 59
M++ RVL++GGTG +G + Q LS +P+ +V AT + D + + V
Sbjct: 1 MNRLRVLILGGTGMVGHKMFQVLSS---RPHLEVYATARDLHGLEGWFDDEALTRIRPHV 57
Query: 60 DLKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
D + FD V AL QPDVVVNC L DP +A+++N + L + +S
Sbjct: 58 D---AADFDTVIRALASVQPDVVVNCIGLIKQLPLAEDPLTAITVN--AQLPHRISLICR 112
Query: 118 NKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
+ +I + TD V++G + Y+E+D ++YG++K E Y C LR+SII
Sbjct: 113 AAKARMIQIGTDCVFDGTRGGYREDDPSDAKDLYGRTKYLGE-VTYPHCIT---LRTSII 168
>gi|39997461|ref|NP_953412.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA]
gi|409912805|ref|YP_006891270.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens KN400]
gi|39984352|gb|AAR35739.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA]
gi|298506397|gb|ADI85120.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens KN400]
Length = 280
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 29/175 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+LVVG G LG+ L++ L P DV ++D+ S
Sbjct: 2 ILVVGAKGMLGRDLMRVL------PGDVRGVD------------------IEEIDITSPE 37
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
V L +P VVVNCAA + CE + D AM++N V L++ T LL+
Sbjct: 38 SVRRVILTL-KPRVVVNCAAYTDVDGCETNADLAMAVN--GEGVGHLAAVTREIGALLVQ 94
Query: 126 LSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V++GVK S + E+D P++VYG+SK+ E+ E + I+R+ +YG
Sbjct: 95 MSTDYVFDGVKESPFLEDDPPNPLSVYGRSKLMGEEQARETPDHL-IVRTQWLYG 148
>gi|334339702|ref|YP_004544682.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum ruminis DSM
2154]
gi|334091056|gb|AEG59396.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum ruminis DSM
2154]
Length = 282
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L F +P +V+NCAA + E A +IN S +L+ L+HLSTD V
Sbjct: 47 LHFLKPTLVINCAAYTQVDRAEECRKEAFAIN--SLGPRYLACLCREIHAALMHLSTDYV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
+ G Y P+NVYG SK+ E I E F I+R+S ++GP +
Sbjct: 105 FNGESRLPYPVYASPDPINVYGLSKLYGEMAIRETLDRFFIVRTSWLFGPGGKN------ 158
Query: 191 PIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILAL 228
++D+VL S+ ++E +D+ CP Y D+ + ++ L
Sbjct: 159 ---FVDTVLKLASEKNRLEIANDQTGCPTYTVDLAQGLMKL 196
>gi|408484425|ref|ZP_11190644.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. R81]
Length = 289
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + + E++PD+A +IN + + E + L LIH STD V+
Sbjct: 50 RPHLIINAAAHTAVDLAESEPDAAFAINAIAPGI-----LAEEAKALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y+E D P+ VYG+SK+A E+ I + ILR+S +Y S K+
Sbjct: 105 DGSKPAPYRESDTPNPLGVYGQSKLAGEQAIAAVGGEYLILRTSWVY-----SNHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ + +L + ++ D+ P + + AL RW
Sbjct: 160 LT-MQRLLQEKPQMRIVADQIGAPTWAGSIANSTRALIERW 199
>gi|452747408|ref|ZP_21947203.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri NF13]
gi|452008524|gb|EME00762.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri NF13]
Length = 329
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +PDV+VN AA + E D A +N S V L++ + + LL+H STD V
Sbjct: 46 LRQCRPDVIVNAAAYTAVDKAETDEAGAALVNATS--VGELAALAKELDALLVHYSTDYV 103
Query: 132 YEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++G F +E+ AP+NVYG++K+ E+ I +LR+S +Y
Sbjct: 104 FDGTAIGFQREDGPTAPLNVYGRTKLQGERLIKASGCRHLLLRTSWVYA 152
>gi|390955629|ref|YP_006419387.1| dTDP-4-dehydrorhamnose reductase [Aequorivita sublithincola DSM
14238]
gi|390421615|gb|AFL82372.1| dTDP-4-dehydrorhamnose reductase [Aequorivita sublithincola DSM
14238]
Length = 291
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGK-PYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K VL+ GG G LG L + + E Y + L LD L +
Sbjct: 2 KNVLIFGGDGQLGWSLKKVVGNTESLFQYHFLGSKEGDVLDVASLDLLFQKY-------- 53
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+P +VNCAA + E D D+A IN + L ++ +
Sbjct: 54 -------------KPAYIVNCAAYTAVDKAEEDIDAAFDINAQGA--ENLGILCKDNNSC 98
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIH+STD V++G+K S KEED P+ VYG SK+ E+ I + ILR+S +Y
Sbjct: 99 LIHISTDFVFDGIKTSPLKEEDNTNPIGVYGLSKLKGEEAIRRSDCEYFILRTSWLYSEF 158
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + L + LS D+ P Y D+ + I+ L
Sbjct: 159 GNNFLKTMLRLAETKKSLS------VVADQVGTPTYAGDLAQFIVYL 199
>gi|242791620|ref|XP_002481794.1| NAD dependent epimerase/dehydratase family protein [Talaromyces
stipitatus ATCC 10500]
gi|218718382|gb|EED17802.1| NAD dependent epimerase/dehydratase family protein [Talaromyces
stipitatus ATCC 10500]
Length = 312
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 37/268 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIE----GKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
LV G TG LG+ + + + G+ Y+ AA P +L A +L
Sbjct: 5 ALVTGATGLLGREVTKSFKQAGWLTVGQGYNRAA-------PPTILKA----------NL 47
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + + L +P VVV+CAA P CE +P+ A INV ++ L+ T +
Sbjct: 48 EDPADVKRI-LDEAKPQVVVHCAANRQPDACEKNPEQARKINVEATRA--LAEGTNARGI 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LLI++STD V+ G+ ++ Y+ + + P N+YG+ K E+ + E +LR +
Sbjct: 105 LLIYISTDYVFAGLEGEAPYETDAKTNPTNIYGEMKRDGEEAVLEATKETGLGVVLRVPV 164
Query: 177 IYGPQTISPVPKSLPIQWIDSV-LSKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWL 233
+YGP + +S +D+V SK D+ R P +DV ++ + R++
Sbjct: 165 LYGPTEYN--GESAVNTILDAVEKSKDPNANIKMDDWARRFPTNTQDVGRVCNDIAVRYI 222
Query: 234 SEDKQMQLL---LNVGGPDRVSRVQMAE 258
+ ++ L L+ + +++ +MA+
Sbjct: 223 RDKNNIKSLPKILHFSAEEDMTKYEMAQ 250
>gi|82543418|ref|YP_407365.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii Sb227]
gi|417681254|ref|ZP_12330632.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii 3594-74]
gi|16611724|gb|AAL27311.1|AF402312_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii]
gi|81244829|gb|ABB65537.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii Sb227]
gi|167410110|gb|ABZ79714.1| RmlD [Escherichia coli]
gi|332097187|gb|EGJ02170.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii 3594-74]
Length = 299
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 22/175 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L+ G TG +G L + L+ PL L+ AL + D +
Sbjct: 3 ILLFGKTGQVGWELQRALA----------------PLGNLI--ALDVHSTDYCGDFSNSE 44
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
G A +K +PDV+VN AA + E++P+ A +N S V ++ +IH
Sbjct: 45 GV-AETVKKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATS--VEAIAKAANEVGAWVIH 101
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
STD V+ G ++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 102 YSTDYVFPGTGEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|386820553|ref|ZP_10107769.1| dTDP-4-dehydrorhamnose reductase [Joostella marina DSM 19592]
gi|386425659|gb|EIJ39489.1| dTDP-4-dehydrorhamnose reductase [Joostella marina DSM 19592]
Length = 305
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A K QPD +NCAA + E +P A +N V ++ + + LIH+ST
Sbjct: 72 AEVFKKHQPDYCINCAAYTNVEKAEEEPGKAFLVNAEG--VKKIAVACKEYQTTLIHIST 129
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K Y D+ P+N YGKSK+ E+ I E + + I+R+S +Y +
Sbjct: 130 DYVFDGEKGTPYTVTDKPNPINEYGKSKLKGEQCIQELLTAYFIIRTSWLYSKEFGKNFY 189
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
K+ I +G+++ ++ CP ++VK IL L
Sbjct: 190 KT-----IVEKAKEGQEIRVVDNQIGCPTDTENLVKYILML 225
>gi|164656146|ref|XP_001729201.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966]
gi|159103091|gb|EDP41987.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966]
Length = 819
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G +G LG+ ++Q + A HH L D D
Sbjct: 4 KVLVTGASGLLGRAVMQTC---------IRAGHHVVGLAFSRASDAIQQLDLTDAD---- 50
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ +D V + P+VV+N AA P V E +PD+ +NV + V + + LI
Sbjct: 51 AVYDVV--RREHPEVVINLAAERRPDVVEQNPDAVKKLNVEAPAVLAKACRELDPPAYLI 108
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKC--SNFAILRSSIIYGPQT 182
H+STD V++G Y D P+N YG+SK E + + LR ++YG +T
Sbjct: 109 HISTDYVFDGRNPPYAVTDATNPLNAYGRSKRDGESAVLASALPGHATNLRLPVLYG-ET 167
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ P ++ + ++++ + ++ R P V DV ++I L
Sbjct: 168 LFPGESAVNV-LLEAIQPRESRIRMDAHSVRYPTNVTDVARVIEQL 212
>gi|148360589|ref|YP_001251796.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
str. Corby]
gi|296106345|ref|YP_003618045.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
2300/99 Alcoy]
gi|148282362|gb|ABQ56450.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
str. Corby]
gi|295648246|gb|ADG24093.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila
2300/99 Alcoy]
gi|401779796|emb|CCK73805.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
gi|401779827|emb|CCK73835.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila serogroup
1]
Length = 294
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + E++PD A +N + V L ++ K LIHLSTD V++G
Sbjct: 51 KPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCHLVNYCSLKNIPLIHLSTDYVFDGE 108
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D PV+ YG++K E+ I + + ILR S ++G Q + V L
Sbjct: 109 KEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTIL---- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL-------------------------- 228
++ S +++ D+ P RD+ +++ +
Sbjct: 165 --NLASSRKELNIVSDQWGRPTSARDIARVLFEIVQKIRHSSFDYWGLYHYAGQGVTNWH 222
Query: 229 --TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVT 286
N +L+ K+ QLLL + ++ ++ E P + +D TK+ L I +
Sbjct: 223 EFANVFLNMAKEKQLLLTLTD---LNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCS 279
Query: 287 YKD 289
+K+
Sbjct: 280 WKN 282
>gi|78188493|ref|YP_378831.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3]
gi|78170692|gb|ABB27788.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3]
Length = 291
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDV---DLK 62
+LV G G LG L Q LS PQ HSF F+D+ D+
Sbjct: 3 ILVTGSRGQLGSEL-QALS---------------VRYPQ-------HSFFFYDLPELDIT 39
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + + +V++N AA + E+D ++A +N + + L+++ + L
Sbjct: 40 NSEQINHIC-NAHHIEVIINAAAYTAVDKAESDAETAFRVNSDGAAL--LATYAKENHAL 96
Query: 123 LIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
L+H+STD V++G S YKE D P+ VYG+SK E+ I + I+R+S +Y
Sbjct: 97 LLHISTDYVFDGTSSVPYKESDPATPLGVYGRSKWEGEERIRAINPSHLIIRTSWLYSMY 156
Query: 182 TISPVPKSLPIQWIDSVLSKGEK--VEFFHDECRCPVYVRDVVKIILAL 228
+ + L + GE+ V D+ P + D+ + +L++
Sbjct: 157 GANFIKTMLRL--------GGERSEVRVVFDQVGTPTWAADLAEALLSM 197
>gi|113475071|ref|YP_721132.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101]
gi|110166119|gb|ABG50659.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101]
Length = 293
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QP++++N AA + E +P+ A ++N + + ++ + LIH+STD V++G
Sbjct: 50 QPELIINAAAYTAVDKSEKEPELADAVNRIAPGI--MAKEAKKLGATLIHISTDYVFDGS 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ +YGKSK+A E+ I E N I+R++ +YG +
Sbjct: 108 QSRPYTETDLTNPLGIYGKSKLAGEEAIRETEVNHIIIRTAWVYGAYGKG--------NF 159
Query: 195 IDSVLSKG---EKVEFFHDECRCPVYVRDVVKII 225
+ ++L G E++ +D+ CP + D+ + I
Sbjct: 160 VKTMLRLGKDREELRVVYDQVGCPTWTGDLAEAI 193
>gi|401674923|ref|ZP_10806920.1| dTDP-4-dehydrorhamnose reductase [Enterobacter sp. SST3]
gi|400217938|gb|EJO48827.1| dTDP-4-dehydrorhamnose reductase [Enterobacter sp. SST3]
Length = 296
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
DL + SG A ++ QPDVVVN AA + E+D A S+N + V+ ++ T N
Sbjct: 39 DLTNLSGI-AETIRRVQPDVVVNAAAHTAVDKAESDVGLAQSLNADA--VDIIAKETANI 95
Query: 120 ENLLIHLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
LL+H STD V++G S ++ EDE P+NVYG++K++ E I I R+S +Y
Sbjct: 96 NALLVHYSTDYVFDGSGSHFRREDEKTGPLNVYGETKLSGELAIINNNPRHLIFRTSWVY 155
Query: 179 GPQTISPVPKSLPI 192
+ + + L +
Sbjct: 156 ATRGANFIKTMLRL 169
>gi|320162333|ref|YP_004175558.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1]
gi|319996187|dbj|BAJ64958.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1]
Length = 297
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 58 DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTE 117
+VD G A+ + +P V+VN AA + E++P++A +N + V L+
Sbjct: 33 EVDFAQPEGLPALMERV-RPQVIVNAAAYTAVDRAESEPETARRVNALAPGV--LAQSAR 89
Query: 118 NKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
L+H+STD V++G K Y EED P++VYG++K E+ + E + ILR+S
Sbjct: 90 RLRAALVHISTDYVFDGRKGAPYTEEDIPNPLSVYGQTKWEGEQAVQEAGGAYLILRTSW 149
Query: 177 IYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR----- 231
+Y + S V K L +W + + + D+ P + R + + I A+ +
Sbjct: 150 VYSLRRESFVSKVL--EWS----RQKDVLRVVDDQVAGPTWARMLAQAISAVLAQSLASG 203
Query: 232 ----WLSEDKQMQLLLNVGGPDRVSRVQMA 257
WL E + + ++ G SR Q A
Sbjct: 204 DIFDWLEERRG---VYHLAGKGWCSRYQWA 230
>gi|209696412|ref|YP_002264343.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida
LFI1238]
gi|208010366|emb|CAQ80704.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida
LFI1238]
Length = 293
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+D+ + +A+A F QP +++N AA + E++ D + +IN N+L+ +
Sbjct: 36 LDITNQDAVNAIADDF-QPTIIINAAAHTAVDKAEDEVDLSYAINRDGP--NYLAQAAQR 92
Query: 119 KENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
++H+STD V+EG K Y E D P VYG+SK+A E + C ILR++ +
Sbjct: 93 VGAAMLHISTDYVFEGNKVGEYDERDVTHPQGVYGESKLAGESAVANACDKHIILRTAWV 152
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+G + V L + LS D+ P Y D+ ++ + R
Sbjct: 153 FGEHGNNFVKTMLRLGVTRDELS------IVGDQFGGPTYAGDIANALITIAER 200
>gi|390574243|ref|ZP_10254379.1| dTDP-4-dehydrorhamnose reductase [Burkholderia terrae BS001]
gi|389933732|gb|EIM95724.1| dTDP-4-dehydrorhamnose reductase [Burkholderia terrae BS001]
Length = 305
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 28/262 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ +P + + T S P Q + +D++
Sbjct: 3 KVAVIGASGLLGRAIV---GELTQQPDWQLVQTTFSRPFGQSVT-----------LDIRD 48
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
DAVA + +PD +V AA P VCE+DP A ++NV + V L++
Sbjct: 49 A---DAVAQFVDRERPDALVIAAAERRPDVCEHDPALARALNVDAVRVIALAA--RRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
++ +STD V++G + Y+ + +P+N YG+SK+ E+ + E +LR +++GP
Sbjct: 104 WVLSISTDYVFDGTQPPYRYDATPSPINAYGRSKLEGEQALAESTDLGCVLRLPLLFGPI 163
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSED 236
S V +P + + E D R P Y DV ++ L W + D
Sbjct: 164 VDWQESAVTSLVPAIAASARTASSEVKAAVMDAWAIRYPTYTPDVAVVVRQLLE-WHARD 222
Query: 237 KQMQLLLNVGGPDRVSRVQMAE 258
+ + + G + +++ +A+
Sbjct: 223 EAVCGTVQWSGDEPMTKYDIAQ 244
>gi|303252479|ref|ZP_07338643.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248514|ref|ZP_07530532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648680|gb|EFL78872.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854990|gb|EFM87175.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 291
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PDV++N AA + E++ + + +INV +L+ + +++H+STD V+EG
Sbjct: 51 HPDVIINAAAHTAVDRAESEIELSEAINVKGP--QYLAEAANEIDAIILHISTDYVFEGT 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
S YKE DE P VYGK+K+A E + + ILR++ ++G + V L +
Sbjct: 109 GSGEYKENDEPNPQGVYGKTKLAGEIAVQQANKRHIILRTAWVFGEHGNNFVKTMLRLA- 167
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ E + D+ P Y D+ ++ + N L+ + + + G VS
Sbjct: 168 -----KERESLGIVSDQFGGPTYAGDIASSLIHIANIILNSKIDVFGVYHFTGKPYVSWA 222
Query: 255 QMAE--VDRGV-----------------------QSPADISMDITKLVQTLNIDPVTYKD 289
A+ D V + PA+ +D+TK+ + I P ++
Sbjct: 223 DFAKKIFDEAVSQKVLEKAPLVNFIATSNYPTSAKRPANSRLDLTKIDEVFGIKPSNWQQ 282
Query: 290 GVK 292
+K
Sbjct: 283 ALK 285
>gi|444911864|ref|ZP_21232035.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
gi|444717640|gb|ELW58466.1| dTDP-4-dehydrorhamnose reductase [Cystobacter fuscus DSM 2262]
Length = 297
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+R+LV G +G LG H+L L G +DV H + L +D +
Sbjct: 3 RRILVTGASGMLGSHVLAVL----GAKHDVLGWSHGSDRAAL-----------HRIDATN 47
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S + + P++ V+C A CE DPD A +N S+ ++ L
Sbjct: 48 ASQVEQF-FRTHTPEICVHCIASPDVLACERDPDMADRLNAQST--EQVARACAEHGAKL 104
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++S++ V++G S Y E+ + P+ +YG +K+ E+ + + +R ++YG
Sbjct: 105 VYISSEYVFDGTSSHGYTEDSQPRPLQIYGTTKLRGEEHT-ARVPHHLTVRLPVLYG--- 160
Query: 183 ISPVPKSLPIQWIDSV---LSKGEKVEFFHDECRCPVYVRDVVKII 225
PVP P WI+++ L +G+ VE R P + DV ++
Sbjct: 161 -GPVPGRKPT-WIEAMLRSLEQGKSVELDDHFERQPTWSYDVASVL 204
>gi|421775674|ref|ZP_16212282.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli AD30]
gi|408459143|gb|EKJ82926.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli AD30]
Length = 299
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA +V E++P+ A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTVVDKAESEPEFAQLLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|435855025|ref|YP_007316344.1| dTDP-4-dehydrorhamnose reductase [Halobacteroides halobius DSM
5150]
gi|433671436|gb|AGB42251.1| dTDP-4-dehydrorhamnose reductase [Halobacteroides halobius DSM
5150]
Length = 278
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD-LKS 63
+VL+ GG G LG L L++ YD+ A +D+D L
Sbjct: 2 KVLITGGQGQLGTRLNSLLAD----KYDIYA---------------------WDIDELDI 36
Query: 64 GSGFDAVALKFG-QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
G + + PDVV++ AA + CE + D A +N + ++ + +
Sbjct: 37 TEGEETIEKVVNLNPDVVIHSAAYTDVDGCEENIDLAYQVNAYGTRN--IAVACQKCDAK 94
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
++++STD V++G K Y E D+ P++VYGKSK+A EKF+ + + + I+R++ +YG
Sbjct: 95 MVYISTDFVFDGKKDEHYIEFDQTNPLSVYGKSKLAGEKFVKDLLNKYFIVRTAWLYGKN 154
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + +L+ D+ P Y +D+ K+I L
Sbjct: 155 GGNFVKTMLKLAQERDLLT------VVDDQVGSPTYAKDLAKVIAEL 195
>gi|409396658|ref|ZP_11247638.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
gi|409118840|gb|EKM95231.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. Chol1]
Length = 303
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLST 128
++ +PD+++N AA + E + + A ++N V E L L+H ST
Sbjct: 46 VRLLRPDLIINAAAYTAVDPAEREREQAFAVNARGPGV-----LAEEAARLGVPLVHYST 100
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K S Y E+D P+ VYG SK+A E+ I ILR+S +Y S
Sbjct: 101 DYVFDGRKTSAYTEQDTPHPLGVYGASKLAGEQAIRAVAGEQLILRTSWVY-----SLHG 155
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
K+ + + +L + +++ DE P + R + + A+ RW
Sbjct: 156 KNFLLT-MQRLLHERDEISVVADEIGAPTWARSIARTTAAMIRRW 199
>gi|254180789|ref|ZP_04887387.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
gi|184211328|gb|EDU08371.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
Length = 280
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S+ + T ST ++ +L + VF + +G
Sbjct: 2 KVFLVGSTGYIGKTLFDACSQ----RWRTLGT--STRDGADIVFSLARAEVFPYEQVSAG 55
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 56 -------------DVVAVAAAISSPDACARDYETAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRQVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
>gi|353235285|emb|CCA67300.1| related to vacuolar protein sorting-associated protein VPS5
[Piriformospora indica DSM 11827]
Length = 307
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G +G LG + G +DV H+ L + VDL
Sbjct: 4 RVLVTGASGVLGSAVFNAFKHSGG--FDVTGIAHTRATDGLQV-----------VDLLKR 50
Query: 65 SGFDAVALK--FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ + G+ D ++CAA P + E +P+ +N S + L+ + +
Sbjct: 51 DSMETFIKQTDLGEGDWCIHCAAERRPDLAEKNPEQTQQLN--SFVPGLLARLSAERGFK 108
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQ 181
L+++STD V++G Y +D P+ +YGK+K E + K S +LR I+YGP
Sbjct: 109 LVYISTDYVFDGTSPPYSPKDRTNPLQLYGKTKRDGELAVLGIKDSKHVVLRVPILYGP- 167
Query: 182 TISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALT 229
+P I + V++ G++ H R P V D+ ++ LT
Sbjct: 168 --APKNGDSAINILLDVVADQSGKRYTMDHFATRYPTNVLDIANFLVRLT 215
>gi|261856084|ref|YP_003263367.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2]
gi|261836553|gb|ACX96320.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2]
Length = 306
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 59 VDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
+DL + F+++ ++ +P+ +VN AA + E +P+ AM IN + ++ N
Sbjct: 43 IDLAQHNDFESL-IRQTKPNCIVNAAAYTAVDKAEQEPELAMRINAEAVAELAQAAAKAN 101
Query: 119 KENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
LIH STD V++G + Y+E+ P VYG+SK+A E+ I +N ILR+S +
Sbjct: 102 IP--LIHYSTDYVFDGTAQQPYQEDQPTNPQGVYGQSKLAGEQAIAASGANHLILRTSWV 159
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVK 223
YG + + ++ + + + E++ D+ CP + R + +
Sbjct: 160 YGTRGGN------FLRTMRRLAREREELSVVADQTGCPTWSRHIAQ 199
>gi|395323271|gb|EJF55751.1| NAD(P)-binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 301
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV+V G +G LG + + V HS P +L +DL
Sbjct: 3 RVIVTGASGVLGSAVYAAFKSAG---HTVLGLAHSRPTDELK-----------KLDLLDE 48
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
++ +F +PD V++CAA P V E DP++A INV S+ L++ ++ + L+
Sbjct: 49 DATESYFAEF-KPDWVIHCAAERRPDVAEKDPEAARKINV--SVPEHLANLSKKLKFKLV 105
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTI 183
++STD V++G Y P+N+YG +K E + S +LR ++YGP
Sbjct: 106 YISTDYVFDGTSPPYPPSAPTNPLNLYGTTKRDGELAVLGVSGSQSIVLRVPVLYGP--- 162
Query: 184 SPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+P + + +V++ G++ + H R P V D+ + L N
Sbjct: 163 APNNTDSAVNILLNVVADRSGKQYKMDHYATRFPTNVLDIADFLARLIN 211
>gi|325836668|ref|ZP_08166211.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1]
gi|325491193|gb|EGC93481.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1]
Length = 284
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K PDVV++ AA + CE + D A IN + L+ + + ++++STD V
Sbjct: 47 IKEYNPDVVIHPAAYTNVDACEENIDLAYQINSIGARNVALAC--KEIDAAMVYISTDYV 104
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G S YKE D +P ++YGKSK+A E ++ + S + I+R++ +YG K+
Sbjct: 105 FDGTSSTPYKEFDVASPQSIYGKSKLAGENYVRDILSKYYIVRTAWLYGKNG-----KNF 159
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
ID + SK +++ +D+ CP Y +D+ + I L +
Sbjct: 160 VTTMID-LASKMPQLKVVNDQNGCPTYTKDLSEAIAQLIKK 199
>gi|255955515|ref|XP_002568510.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590221|emb|CAP96395.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 314
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G +G+LG+ + + + V S P P +L A DL+
Sbjct: 5 VLVTGASGFLGRAVF---NTFQHSGVLVVGQGFSRPAPPTILKA----------DLEKEE 51
Query: 66 G----FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
FD + +P +V++CAA P +CE DPD A +NV ++ L+ + +
Sbjct: 52 DIRMLFDEI-----KPQIVIHCAANKSPDLCEKDPDQARRVNVEATRT--LAKECQARGA 104
Query: 122 LLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSI 176
LI++STD V+ G ++ Y+ + E P N+YG+ K E + E + +LR +
Sbjct: 105 FLIYISTDYVFPGTEGEAPYESDSETKPPNLYGQLKRDGEVAVLEATKDSGMGIVLRVPV 164
Query: 177 IYG-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
+YG + S + + + + V+ R P DV ++ + ++L E
Sbjct: 165 LYGSAKENSESAVNTLVDAVKKATDENAGVKMDDWAMRYPTNTEDVARVCRDIVIKYLRE 224
Query: 236 DKQMQ---LLLNVGGPDRVSRVQMAE 258
++ + +L DR+++ ++ +
Sbjct: 225 KEKRKDFPRILQFSSEDRMTKYEICQ 250
>gi|386619663|ref|YP_006139243.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NA114]
gi|432422393|ref|ZP_19664939.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE178]
gi|432476262|ref|ZP_19718262.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE208]
gi|432559295|ref|ZP_19795965.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE49]
gi|432711097|ref|ZP_19946158.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE6]
gi|333970164|gb|AEG36969.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NA114]
gi|430944506|gb|ELC64602.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE178]
gi|431006203|gb|ELD21210.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE208]
gi|431091146|gb|ELD96894.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE49]
gi|431249150|gb|ELF43321.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE6]
Length = 299
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPKFAQLLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++EED AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEEDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|417822434|ref|ZP_12469033.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae HE48]
gi|340049534|gb|EGR10449.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae HE48]
Length = 296
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHSLVQQLSTMKEVEF-------------LAVDR-------DQLDITHP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAANKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|340623551|ref|YP_004742004.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis X1]
gi|339903819|gb|AEK19261.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis X1]
Length = 274
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
PD V+N AA++ +CE + + A N S+ ++ + + L H+STD V++G
Sbjct: 64 NPDFVINTAAMTNVDLCEKEKELAYKSNALSA--EYIGKACKKTGSKLCHISTDYVFDGE 121
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D I P+N YG +K E+ + E N +I+R S YG SPV + W
Sbjct: 122 KGNYIETDPINPINYYGVTKAEGERLLNEIDYDNKSIVRISTPYG---FSPVKLNF-YTW 177
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
+ L + + D+ + D+ + ++ + LS +++ GG +++SR
Sbjct: 178 VLESLKSEKPINIVTDQYNTSTNLNDLSEFMMKIQKNDLSR------IIHFGGSEKLSRY 231
Query: 255 QMA 257
+ A
Sbjct: 232 EFA 234
>gi|75759811|ref|ZP_00739888.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228899902|ref|ZP_04064146.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222]
gi|228906954|ref|ZP_04070821.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200]
gi|434374262|ref|YP_006608906.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis HD-789]
gi|74492711|gb|EAO55850.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228852702|gb|EEM97489.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200]
gi|228859742|gb|EEN04158.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222]
gi|401872819|gb|AFQ24986.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis HD-789]
Length = 284
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELNSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPEGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNIVINKLIH 200
>gi|302870784|ref|YP_003839420.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis
OB47]
gi|302573643|gb|ADL41434.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis
OB47]
Length = 281
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P ++++CAA + CE D D A +N + ++ E L+++STD V++G
Sbjct: 49 KPSIIIHCAAYTNVDGCERDKDIAFKVNAIG--IRNVAMAAEKVGAKLVYISTDYVFDGE 106
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D P+++YG SK+A E+F+ CS + I+R + +YG + V + +
Sbjct: 107 KEKPYNEFDRPNPISIYGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKL-- 164
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
KGE ++ +D+ P + +DVV+ + + N
Sbjct: 165 ---AKEKGE-IDVVNDQRGNPTFTKDVVQAVEVMMN 196
>gi|301060716|ref|ZP_07201531.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2]
gi|300445113|gb|EFK09063.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2]
Length = 291
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 32/180 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ GGTG LG+ ++ K +V A S +D+
Sbjct: 2 KILITGGTGQLGRDC----EKVLAKDQNVTAVGSSA------------------LDVSDR 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
DA +PDVV+NCAA + CE + A INV P +L ++ +
Sbjct: 40 KAVDAFIGNL-KPDVVLNCAAFTRVDDCETQKEPAWKINVVGPKNL----ATAARASGSR 94
Query: 123 LIHLSTDQVYEGVK---SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V++G K +Y E D P + YG SK+ EK + + ILR++ +YG
Sbjct: 95 LVHISTDYVFDGRKPIPEYYTESDRPHPTSYYGFSKLEGEKAVALATDRYTILRTAWLYG 154
>gi|197294957|ref|YP_002153498.1| hypothetical protein BCAS0105 [Burkholderia cenocepacia J2315]
gi|444360774|ref|ZP_21161950.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
BC7]
gi|444366991|ref|ZP_21166988.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|195944436|emb|CAR57038.1| putative exported protein [Burkholderia cenocepacia J2315]
gi|443599391|gb|ELT67677.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
BC7]
gi|443603583|gb|ELT71576.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia
K56-2Valvano]
Length = 321
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 34/246 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEG--------KPYDVAATHHSTPLPQLLLDALPHSFVFF 57
+L+VG +G LG+ + LS P A + P P +
Sbjct: 13 ILLVGASGLLGRAVAASLSREPSLTLLATIRNPQGAGAKRLALP---------PDNIAEL 63
Query: 58 DVDLKSGSGFDAVALK----FGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLS 113
DV D+ +L+ +P V+ CAA P VCE DP +A +INV + +
Sbjct: 64 DV-------LDSPSLERLFEIHKPAAVILCAAERRPDVCERDPAAARAINV--TAPARIG 114
Query: 114 SFTENKENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILR 173
+ + +STD V++G + Y E+ P+N+YG++K+ E + +LR
Sbjct: 115 ALAARYGAWTLGISTDYVFDGKAAPYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLR 174
Query: 174 SSIIYGP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+++GP + S V +P + S + V R P Y DV ++I LT
Sbjct: 175 LPLLFGPIVDWSESAVTSLVPAV-VASARPGADAVGMDAWAIRYPTYTPDVAQVIRDLTL 233
Query: 231 RWLSED 236
R L+ D
Sbjct: 234 RHLAGD 239
>gi|418465977|ref|ZP_13036909.1| dTDP-4-dehydrorhamnose reductase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359755475|gb|EHK89639.1| dTDP-4-dehydrorhamnose reductase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 292
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 57/314 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGHCLTQ---QLQGK-HEILAVDHD------------------EIDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 SAVKKTVKNF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D P ++YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDATDPQSIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGKSVEYGIY 211
Query: 244 NVGGPDRVSRVQMAEV--DRGV-----------------------QSPADISMDITKLVQ 278
+ G VS A D V + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKVPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 279 TLNIDPVTYKDGVK 292
+I P ++ +K
Sbjct: 272 VFSIQPSDWQRALK 285
>gi|171319431|ref|ZP_02908537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
gi|171095360|gb|EDT40339.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5]
Length = 307
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+VVN AA + E+D +A ++N + +S + +LLIH STD V++G
Sbjct: 59 EPDIVVNAAAYTAVDRAEDDVVTAFAVNRDAVASL--ASAAAARGSLLIHFSTDYVFDGS 116
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
K Y E D + P+NVYG SK+A E+ I + ++ + R+S +YG +
Sbjct: 117 KQTPYSESDGVHPLNVYGASKLAGEQAIADIGGDWLVFRTSWVYGAR 163
>gi|167904101|ref|ZP_02491306.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei NCTC 13177]
Length = 280
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S+ + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLFDACSQ----RWRTLGTSTRDGADIVFSLARAEAFSYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACARDYETAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRQVEAELGENAA-IKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
>gi|429764135|ref|ZP_19296461.1| dTDP-4-dehydrorhamnose reductase [Clostridium celatum DSM 1785]
gi|429188594|gb|EKY29470.1| dTDP-4-dehydrorhamnose reductase [Clostridium celatum DSM 1785]
Length = 297
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 19/179 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVF-FDVDLKS 63
++L+ G G LG L + + AT + + + + +S VF DVD
Sbjct: 2 KILITGSNGQLGNELQK-----------IVATGRAEIGS--VSEQIKNSEVFALDVDKLD 48
Query: 64 GSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+ + V LK PDVV+NCAA + CE + D A+ IN + L+ +E
Sbjct: 49 ITKLEQVKTVLKEINPDVVINCAAATNVDGCEANKDLALKINAIGA--KNLAIVSEEIGA 106
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+ +STD V+ GV E D +AP +VYGK+K+ E+++ E S + I+R++ +YG
Sbjct: 107 KLVQVSTDYVFSGVGEIPLNESDLVAPYSVYGKTKLLGEEYVREFSSKYYIVRTAWLYG 165
>gi|237808787|ref|YP_002893227.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187]
gi|237501048|gb|ACQ93641.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187]
Length = 299
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
QPDVV+N AA + E + D++ +IN +L+ + + ++H+STD V+ G
Sbjct: 56 QPDVVINAAAHTAVDKAETEIDASFAINRDGP--KYLAEAATSVDAAMLHISTDYVFSGD 113
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D +AP VYG SK+A E+ + S ILR++ ++G + V L +
Sbjct: 114 KDGTYSEADPVAPQGVYGASKLAGEEAVITANSKHIILRTAWVFGEHGNNFVKTMLRLG- 172
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
S+ +++ D+ P Y D+ +L + +
Sbjct: 173 -----SQRDQLGIVADQFGGPTYAGDIAAALLVMAEK 204
>gi|154493894|ref|ZP_02033214.1| hypothetical protein PARMER_03238 [Parabacteroides merdae ATCC
43184]
gi|423722648|ref|ZP_17696801.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
gi|154086154|gb|EDN85199.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae ATCC
43184]
gi|409241921|gb|EKN34686.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL09T00C40]
Length = 288
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 34/228 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LG + + +AA + PQ ++FVF DVD
Sbjct: 2 KTILVTGANGQLGNSIRR-----------LAAGY-----PQ-------YAFVFTDVDTLD 38
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
AV +K Q D ++NCAA + V + + D A+ + + V L
Sbjct: 39 ICDAQAVNAFVKEKQVDYIINCAAYTA--VDKAEDDEALCLRINRDAVRNLGEAARMAGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D P +VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 RVIHVSTDYVFDGTNHLPYVETDNTCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLYSE 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + ++ E++ D+ P Y D+ I A+
Sbjct: 157 FGNNFVKTMLRLG------NEREQLSVVFDQIGSPTYAGDLAAAIFAV 198
>gi|420254530|ref|ZP_14757526.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. BT03]
gi|398048634|gb|EJL41101.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. BT03]
Length = 305
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 28/262 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+V V+G +G LG+ ++ E+ +P + + T S P Q + +D++
Sbjct: 3 KVAVIGASGLLGRAIV---GELTQQPDWQLVQTTFSRPFGQSVT-----------LDIRD 48
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
DAVA + +PD +V AA P VCE+DP A ++NV + V ++
Sbjct: 49 A---DAVAQFVDRERPDALVIAAAERRPDVCEHDPALARALNVDA--VRAIALAARRHGA 103
Query: 122 LLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP- 180
++ +STD V++G + Y+ + +P+N YG+SK+ E+ + E +LR +++GP
Sbjct: 104 WVLSISTDYVFDGTQPPYRYDATPSPINAYGRSKLEGEQALAESTDLGCVLRLPLLFGPI 163
Query: 181 --QTISPVPKSLPIQWIDSVLSKGEKVEFFHD--ECRCPVYVRDVVKIILALTNRWLSED 236
S V +P + + E D R P Y DV ++ L W + D
Sbjct: 164 VDWQESAVTSLVPAIAASARTASSEVKAAVMDAWAIRYPTYTPDVAVVVRQLLE-WHARD 222
Query: 237 KQMQLLLNVGGPDRVSRVQMAE 258
+ + + G + +++ +A+
Sbjct: 223 EAVCGTVQWSGDEPMTKYDIAQ 244
>gi|257792903|gb|ACV67280.1| RmlD [Escherichia coli]
Length = 299
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPKFAQLLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++EED AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEEDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|228964269|ref|ZP_04125388.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402561694|ref|YP_006604418.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis HD-771]
gi|423361287|ref|ZP_17338789.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD022]
gi|423564395|ref|ZP_17540671.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus MSX-A1]
gi|228795366|gb|EEM42854.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401079735|gb|EJP88029.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD022]
gi|401197155|gb|EJR04092.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus MSX-A1]
gi|401790346|gb|AFQ16385.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis HD-771]
Length = 284
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELNSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPEGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNIVINKLIH 200
>gi|218460817|ref|ZP_03500908.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli Kim 5]
Length = 206
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 69 AVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLST 128
A A +PDV+V+ AA + E++ + A S+N + ++ +IH+ST
Sbjct: 44 AAAFSALRPDVIVSAAAYTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVP--VIHIST 101
Query: 129 DQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V+ G K S Y EED P++VYG+SK+A EK + N ILR++ +Y P
Sbjct: 102 DYVFSGDKASAYCEEDATGPISVYGRSKLAGEKAVAAANPNHVILRTAWVYSP------- 154
Query: 188 KSLPIQWIDSVLSKGEKVEFFH---DECRCPVYVRDVVKIILALTNR 231
++ ++L E + D+ CP D+ ILA+ R
Sbjct: 155 --FGANFLKTMLRLSETRDHLRVVADQRGCPTSALDIADAILAIATR 199
>gi|357416181|ref|YP_004929201.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas spadix BD-a59]
gi|355333759|gb|AER55160.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas spadix BD-a59]
Length = 301
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV+GG G +G LL+ L+ + V AT S +L D P FD
Sbjct: 2 KLLVLGGNGQVGHELLRALAPLG----QVMATTRS----GMLEDGTPCELADFDQPHTLT 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + A PDVVVN AA + E++P +A N + V L+ ++ LL+
Sbjct: 54 ALVERTA-----PDVVVNAAAWTAVDKAESEPAAAARANAQAPGV--LARACAARDALLV 106
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H STD V+ G + Y+E+D AP+ VYG +K+A E + + I R++ +YG +
Sbjct: 107 HYSTDYVFPGDGTRPYREDDPTAPLGVYGATKLAGEDAVRACGARHMIFRTAWVYGAR 164
>gi|325265267|ref|ZP_08131992.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5]
gi|324029446|gb|EGB90736.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5]
Length = 293
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVY--E 133
+P+ ++NCA ++ + CE + A +N + LS+ + +I +STD ++ +
Sbjct: 56 RPNTIINCAGMTDVQECEKHIEQAYKVNALGA--RNLSAIARKIDARIIQISTDDIFWDK 113
Query: 134 GVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQ 193
+SF+ E D P VYGKSK+A E F+ E I+RSS +YG + +
Sbjct: 114 RYRSFH-EFDVPNPRTVYGKSKLAGENFVKELAPKHLIIRSSWVYGMEGHN--------- 163
Query: 194 WIDSVLSK---GEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDR 250
+++S++ + G +E D+ CP +++ ++IL R + E+++ GG
Sbjct: 164 FVNSIIEQAKNGGCIEAAVDDYACPTSAKELSRVIL----RLIKEEQEGIYHAVCGGS-- 217
Query: 251 VSRVQMAEVDRGVQSPADISMDITKLVQ 278
SR ++AE + D+ ++ K+V+
Sbjct: 218 CSRYELAEEILRLMGKTDVRLEAKKMVE 245
>gi|33594890|ref|NP_882533.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis 12822]
gi|33564966|emb|CAE39913.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis]
Length = 318
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
+L++G TG +G LL + PL L AL DL+
Sbjct: 23 ILLLGRTGQIGDALL------------------AHPLAWARLAALERR----QADLRDLG 60
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
AV L P +++N AA + E +P+ A+ IN + V ++ + LL+H
Sbjct: 61 RLAAV-LDAYAPRILINAAAYTEVDRAEAEPELALRINAQAVAV--MADYARRNNALLVH 117
Query: 126 LSTDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
STD V++G ++ Y+E D P+N YG+SK+A E+ I ILR+S +Y
Sbjct: 118 YSTDYVFDGKRARAYRETDAAHPLNAYGRSKLAGEQAIAASGCPHLILRTSWVYA 172
>gi|302675845|ref|XP_003027606.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8]
gi|300101293|gb|EFI92703.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8]
Length = 307
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++++ G +G LG + + GK Y+V HS L+ +DL +
Sbjct: 2 KIVITGASGVLGSAIRKAFESASGKDYEVIPLSHSQSGNGLI-----------PLDL-TD 49
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
SG L +PD V++CAA P V E DP++A +N +++ + L+ +++ L
Sbjct: 50 SGKVEELLSSKKPDWVIHCAAERRPDVAEKDPEAARRLN--AAVPDQLAKLSKSLGFTLT 107
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQTI 183
++STD V++G YK P+N+YG +K E + + + +LR ++YGP
Sbjct: 108 YISTDYVFDGKNPPYKPSSPTNPLNLYGVTKRDGEIAVLGVEGAKVMVLRVPVLYGPIPS 167
Query: 184 SPVPKSLPIQWIDSVLSK-GEKVEFFHDECRCPVYVRDVVKII 225
+S +D V + G+ + H R P V D+ K +
Sbjct: 168 GKNSESAINILLDIVKDQSGKTYKMDHYAVRYPTNVLDIGKFL 210
>gi|317488784|ref|ZP_07947317.1| RmlD substrate binding domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325832150|ref|ZP_08165205.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1]
gi|316912089|gb|EFV33665.1| RmlD substrate binding domain-containing protein [Eggerthella sp.
1_3_56FAA]
gi|325486202|gb|EGC88655.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1]
Length = 723
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
+ K VL++G +G+LG + Q LS + ++VA T LD + + V
Sbjct: 232 IEKLSVLLIGASGFLGTKMKQILS----RSFEVAGTCRKGSPDLYALDPIRKNQVI---- 283
Query: 61 LKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKE 120
S FD V +PD+VVN +S P C ++ + A +NV +V + + +
Sbjct: 284 ----SLFDVV-----KPDIVVNLVGMSDPSACLSNQELAYDLNV--RVVENICEACDAFD 332
Query: 121 NLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+ LIH+STD V++G K Y+ +D P N YG +K+ AE I I+R I+YG
Sbjct: 333 SKLIHISTDYVFDGEKIGMYETDDSRLPKNYYGHTKLMAED-IVSALPRHLIVRVPILYG 391
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+ S P + ID L G V ++ R P + +V
Sbjct: 392 YNSESDKPTFFS-KVIDD-LGAGRSVLCDDEQIRYPALIDEV 431
>gi|345876152|ref|ZP_08827927.1| dTDP-4-dehydrorhamnose reductase [Neisseria weaveri LMG 5135]
gi|343967109|gb|EGV35359.1| dTDP-4-dehydrorhamnose reductase [Neisseria weaveri LMG 5135]
Length = 242
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG- 134
QPD +VN AA + E + D+A ++N S V+ L+S IH+STD +++G
Sbjct: 6 QPDAIVNAAAYTAVDRAEQESDTAFAVN--GSAVHNLASAARAVHARFIHISTDYIFDGK 63
Query: 135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E P+NVYG+SK+A E N I+R+S ++ + V L
Sbjct: 64 AKTPYTESGLPNPLNVYGRSKLAGELLALSTNPNSLIIRTSWVFSEHGNNFVKTMLDAAA 123
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ LS + D+ P Y D+ +I++ L N+
Sbjct: 124 ANRELSIAD------DQTGTPTYAGDLAQILIDLLNK 154
>gi|402847356|ref|ZP_10895651.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas sp. oral taxon 279
str. F0450]
gi|402266669|gb|EJU16090.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas sp. oral taxon 279
str. F0450]
Length = 287
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 5 RVLVVGGTGYLG---QHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDL 61
++LV+G +G LG +H+ QG AT H H +DL
Sbjct: 2 KILVLGASGQLGRCIEHVTQG------------ATDHY------------HFATRETLDL 37
Query: 62 KSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
S + A + G +V++NCAA + E++P+ A +N + + LS TE
Sbjct: 38 SDTSAIEQFATREG-IEVIINCAAYTAVDRAEDEPEQADEVNHLA--IARLSELTERLGI 94
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V+ G S Y E+ P+ VYG++K E+ I ILR+S +Y P
Sbjct: 95 FLIHISTDYVFSGRSSIPYTEDMPTEPIGVYGQTKRRGEEAIQRLAPRHIILRTSWLYAP 154
>gi|421869373|ref|ZP_16301010.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia H111]
gi|358069980|emb|CCE51888.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia H111]
Length = 321
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+ CAA P VCE DP +A +INV + + + + +STD V++G
Sbjct: 79 KPAAVILCAAERRPDVCERDPAAARAINV--TAPARIGALAARYGAWTLGISTDYVFDGK 136
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP---QTISPVPKSLPI 192
+ Y E+ P+N+YG++K+ E + +LR +++GP + S V +P
Sbjct: 137 AAPYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIADWSESAVTSLVPA 196
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+ S + V R P Y DV ++I LT R L+ D
Sbjct: 197 V-VASARPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLAGD 239
>gi|47568424|ref|ZP_00239125.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241]
gi|47554972|gb|EAL13322.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241]
Length = 284
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+R+++ G G LG+ L + E+ + YD+ P + LLD +
Sbjct: 2 KERIIITGANGQLGKQLQE---ELNPEEYDI------YPFDKKLLD------------IT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V K +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISQVQQVVQKI-RPHIIIHCAAYTKVDQAEKERDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E + AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGDRPEGYDEFHDPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + E+V D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KEREEVSVVADQIGSPTYVADLNVMINKLIH 200
>gi|410727574|ref|ZP_11365789.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. Maddingley
MBC34-26]
gi|410598481|gb|EKQ53052.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. Maddingley
MBC34-26]
Length = 288
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 132/287 (45%), Gaps = 41/287 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+++L+ GG G+ L A ++ L+ D ++D+ +
Sbjct: 2 EKILITGGKGFFSSRL---------------ALYYKGKYEFLVTDKD-------ELDITN 39
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ + KF P++V++ AA++V C +P+ A INV ++ ++ T+ L
Sbjct: 40 EGNVNEIFEKF-NPNIVIHAAAVAVTDFCNKNPEIAHKINVDGAIN--VAKATKKVGGKL 96
Query: 124 IHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG-P 180
+ +S++Q++ G + +KE+DE P VYG++K+ AEK + E I+R + ++G P
Sbjct: 97 VFISSEQIFNGNTNSGPFKEDDEAKPDTVYGQNKLEAEKLLKEIIDELWIVRFTWLFGLP 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL------TNRWLS 234
+ ++ + I ++ K EK+ +E R YV ++++ L T S
Sbjct: 157 DRNCGMANNILWETISKII-KNEKINVSSNEFRGMTYVYNMIENFEILFKSPYGTYHLGS 215
Query: 235 EDKQMQ------LLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITK 275
E+ Q + + +G R+ + + + ++ +P DI ++ K
Sbjct: 216 ENNQNRYEVVKSIFRKIGLESRIDDLVIEDREKYKTNPRDIRLNCEK 262
>gi|336472743|gb|EGO60903.1| hypothetical protein NEUTE1DRAFT_57815 [Neurospora tetrasperma FGSC
2508]
gi|350294014|gb|EGZ75099.1| NAD(P)-binding protein [Neurospora tetrasperma FGSC 2509]
Length = 338
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 36/279 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQG---------LSEIEGKPYDVAATHHSTPLPQLLLDALPHSF 54
K LV G TG LG+ +++ LS G ++V T S
Sbjct: 10 KTALVTGATGLLGRQVVRAFQGLSVPTELSSKAGWTWEVKGTGFSRA----------DGV 59
Query: 55 VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
VDL+ + V L P V+V+CAA P + DP+ +NV + L+
Sbjct: 60 NVLKVDLEKEEEVERV-LGDVSPQVLVHCAANRFPDKVDADPEGTRLLNV--EVTRTLAR 116
Query: 115 FTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-- 170
++ LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S
Sbjct: 117 ACASRGILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKAGKE 176
Query: 171 ----ILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKI 224
++R ++YG +S +D+VL +G+KV+ H R P DV ++
Sbjct: 177 GLGVVMRVPVLYGKTEEGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRV 236
Query: 225 ILALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEV 259
+ ++LS E + +L G ++ ++ +M ++
Sbjct: 237 CRDVAVKYLSTSEAERTSLPRILQFSGEEQYTKYEMCQL 275
>gi|40388618|gb|AAR85523.1| RmlD [Thermoanaerobacterium thermosaccharolyticum]
Length = 294
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 13/156 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLLIHLSTDQVYE 133
+P+ ++NCAA + CE+D D+A +N P +L ++S + + L+H+STD V+
Sbjct: 63 KPNAIINCAAYTNVDRCESDIDNAFKVNAIGPRNLA--IASHIVDAK--LLHISTDYVFS 118
Query: 134 GVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPI 192
G + YKE D PV+VYGKSK+ E+++ + C + I+R++ +YG K+
Sbjct: 119 GEGNEPYKEYDMPNPVSVYGKSKLLGEQYVRDFCDKYFIVRTAWLYG-----KYGKNFVY 173
Query: 193 QWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
I++ +G +E +D+ P D+ IL L
Sbjct: 174 TIINAAKERG-YLEVVNDQRGNPTNAEDLAYHILKL 208
>gi|381200751|ref|ZP_09907885.1| dTDP-4-dehydrorhamnose reductase [Sphingobium yanoikuyae XLDN2-5]
Length = 298
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 38/249 (15%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLIHLST 128
AL +PD++V+ A + E+D AM+IN PS + + + + LIH+ST
Sbjct: 47 ALVNAKPDIIVSAGAYTAVDKAESDDQLAMTINGRAPSMIADTAARL----DVPLIHIST 102
Query: 129 DQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G + Y+E+D + PV+VYG++K A E+ + + AI+R+S +Y P + V
Sbjct: 103 DYVFDGYGATAYREDDPVNPVSVYGRTKRAGEEAVMAAGRDHAIVRTSWVYSPFGNNFVK 162
Query: 188 KSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE--DKQMQLLLNV 245
L + ++ + V D+ P D+ + + + ++ L D + + ++
Sbjct: 163 TML------RLAAERDLVAVVADQKGAPTSAFDIAQGLFTMADQMLVHRGDPGRRGIFHL 216
Query: 246 ----------------------GGPD-RVSRVQMAEVDRGVQSPADISMDITKLVQTLNI 282
GGP V R+ A+ + P++ +D KL+ I
Sbjct: 217 TGATSTDWATFAEGIFAASAACGGPSAAVRRITTADYPTAARRPSNARLDNGKLLTHFGI 276
Query: 283 DPVTYKDGV 291
P ++ +
Sbjct: 277 SPPSWTQSI 285
>gi|228957593|ref|ZP_04119344.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423629813|ref|ZP_17605561.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD154]
gi|228802092|gb|EEM48958.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401266312|gb|EJR72389.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD154]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDFAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYTGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|443922005|gb|ELU41521.1| NAD dependent epimerase/dehydratase [Rhizoctonia solani AG-1 IA]
Length = 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 33/254 (12%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
L G +G LG + Q ++G +V T H+ P ++ +DL
Sbjct: 89 TLTSGASGVLGSAVYQAFRSVKG--VEVKGTAHTRPSGDVIA-----------IDLCDEP 135
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
+ F +PD VV+CAA P V + ++ VP++L LSS T+ LI+
Sbjct: 136 SVAKLVQDF-KPDWVVHCAAERRPDVANVEATWTLNGAVPATLAR-LSS-TKEHSFTLIY 192
Query: 126 LSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-----KCSNFAILRSSIIYGP 180
+STD V++G + Y + + PVN+YG++K+A E+ + + K +LR ++YGP
Sbjct: 193 ISTDYVFDGTAAPYSVDAKPNPVNLYGETKLAGERAVLDDGYQGKPGQRVVLRVPVLYGP 252
Query: 181 QTISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALT-------NR 231
+P I + +++ G++ H R P V D+ ++ L N
Sbjct: 253 ---APKNSDSAINTLVDIVNDQSGKQYTMDHYATRYPTNVLDIADFLVRLADAADPPPNL 309
Query: 232 WLSEDKQMQLLLNV 245
+S K QL L +
Sbjct: 310 AVSRPKNTQLSLEI 323
>gi|39933196|ref|NP_945472.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas palustris
CGA009]
gi|39652821|emb|CAE25563.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas
palustris CGA009]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R++V G G + Q L Y+ AA ++ +++L + P ++DL
Sbjct: 2 RIVVTGRHGQVAQAL-----------YERAAGTNA----EIVLLSRP------EIDLTRQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL-L 123
S + AL +PD VVN AA + E++PD A +IN + + K + +
Sbjct: 41 SDIE-TALSAVKPDAVVNAAAYTAVDQAESEPDLAYAINAEGAGA---VARAAAKLGVPM 96
Query: 124 IHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+ LSTD V++G + Y+E D P++VYG SK+A E+ + + + A+LR+S +Y
Sbjct: 97 VQLSTDYVFDGTAEQPYRETDPTNPLSVYGASKLAGERAVAKATPDHAVLRTSWVY---- 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
SP K+ ++ + ++ + ++V D+ P D+ +L + L+E + L
Sbjct: 153 -SPFGKNF-VRTMLALARQRDEVRVVWDQVGSPTSALDIADGVLGVVRNLLAEPTRSDL 209
>gi|254523254|ref|ZP_05135309.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14]
gi|219720845|gb|EED39370.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GG G +GQ LL+ L+ + V AT S LP D P D
Sbjct: 3 VLVFGGNGQVGQELLRSLAPLG----VVVATTRSGQLP----DGSPCEVA----DFAQPD 50
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENLL 123
A+ + QP VVVN AA + E + ++A + NV P + W ++ + L
Sbjct: 51 SLTALLDRL-QPTVVVNAAAYTAVDRAEQEVEAAFAANVQAPGVIARWCAA----HDVPL 105
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+H STD V++G S Y+E++ AP+ VYG SK E + E I R++ +Y
Sbjct: 106 VHYSTDYVFDGQGSAPYREDEPTAPLGVYGTSKRDGEDAVREAGGRHLIFRTAWVY 161
>gi|160937122|ref|ZP_02084485.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC
BAA-613]
gi|158440023|gb|EDP17771.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC
BAA-613]
Length = 294
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 41/304 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYD-VAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
+R+L+ G G+LG + + S +G Y+ V TH + D
Sbjct: 3 RRLLITGAGGFLGSRICEYYSNRDG--YEAVGVTHRELDIE----------------DFV 44
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ S F +K +PD V++CAA+S CE +P + +NV ++ L+ N +
Sbjct: 45 AVSAF----IKAIRPDYVLHCAAISNTGTCERNPVLSEKVNVRGTIN--LAKACRNAGSR 98
Query: 123 LIHLSTDQVYEGVKSF--YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+I S+DQ+Y S +E E P NVYG+ K AE+ + + LR + +Y
Sbjct: 99 MIFTSSDQIYNTSHSMEPNREGSEGKPGNVYGRDKKRAEEAMLTYLPDAVALRLTWMYDA 158
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKII------------LAL 228
+ +Q + L +VEF + R YV +VV+ +
Sbjct: 159 PSRGRAAGQGLLQKLADALKDRREVEFPVHDYRGITYVWEVVRHLEEAMGLPGGVYNFGS 218
Query: 229 TNRWLSEDKQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTYK 288
NR+ + D L + G D ++ + +R P +++MD K +++ I
Sbjct: 219 ENRYNTFDTARLFLRELAGSDSGGILKRND-ERFASCPRNLTMDTDK-IKSYGIRFFNTS 276
Query: 289 DGVK 292
+G++
Sbjct: 277 EGIR 280
>gi|229584494|ref|YP_002842995.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27]
gi|228019543|gb|ACP54950.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27]
Length = 274
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 55/297 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L++G +G LG L L K Y+ + +DL +
Sbjct: 2 RILIIGASGQLGLELSGILKGEIIKVYNTKEIQGG-----------------YKLDLTNY 44
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S + +K +PDV++N A+L+ CE + ++N + V + + E LI
Sbjct: 45 STVEDFIIK-KRPDVIINTASLTDVDKCEVEKAETFTVNAEA--VKHIVRASRIIEAYLI 101
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H+STD V++G + Y E D P+N YG SK+ E + + I+R+S ++
Sbjct: 102 HISTDYVFDGERGLYNEGDLPNPINYYGLSKLLGETYALSYDDSL-IVRTSGVFR----- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
K P+ ++ L +G++V F P+ R + + I L + +LN
Sbjct: 156 --HKGFPV-YVYKTLKEGKEVSAFKG-YYSPISARKLAEAISELIQY------RKTGILN 205
Query: 245 VGGPDRVSRVQMA--------------EVD--RG--VQSPADISMDITKLVQTLNID 283
V G +R+SRV +A EVD +G + P D S+DI+K + L++D
Sbjct: 206 VAG-ERISRVDLAMKIKDKFNLSGSIKEVDYVKGWIAKRPFDSSLDISKAKKVLSVD 261
>gi|423346069|ref|ZP_17323757.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
gi|409220867|gb|EKN13820.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides merdae
CL03T12C32]
Length = 295
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K +LV G G LG + + +AA + PQ ++FVF DVD
Sbjct: 2 KTILVTGANGQLGNSIRR-----------LAAGY-----PQ-------YAFVFTDVDTLD 38
Query: 64 GSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
AV +K Q D ++NCAA + E+D + IN V L
Sbjct: 39 ICDAQAVEAFVKEKQVDYIINCAAYTAVDKAEDDEPLCLRIN--RDAVRNLGEAARMAGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D P +VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 RVIHVSTDYVFDGTNHLPYVETDNTCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
++ ++L G E++ D+ P Y D+ I A+
Sbjct: 155 -------SEFGNNFVKTMLRLGNEREQLSVVFDQIGSPTYAGDLAAAIFAV 198
>gi|335043563|ref|ZP_08536590.1| dTDP-4-dehydrorhamnose reductase [Methylophaga aminisulfidivorans
MP]
gi|333790177|gb|EGL56059.1| dTDP-4-dehydrorhamnose reductase [Methylophaga aminisulfidivorans
MP]
Length = 292
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV- 135
PD++VN AA + EN+ + A +N + + L+ + ++ LIH STD V+ G
Sbjct: 51 PDLIVNAAAYTAVDRAENEQELAYKVNALAPQI--LAEVAKKRDIPLIHYSTDYVFNGSG 108
Query: 136 KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWI 195
+ EE E P+NVYG++K+A E I + I R+S +YG + + + ++ I
Sbjct: 109 DKAWTEEAETQPLNVYGRTKLAGELAISSATDKYLIFRTSWVYGARGANFL-NTMKRLAI 167
Query: 196 DSVLSKGEKVEFFHDECRCPVYVRDVVKI 224
D V ++ HD+ P + R + +
Sbjct: 168 DKV-----QLSIVHDQIGAPTWSRHIADV 191
>gi|395496054|ref|ZP_10427633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. PAMC 25886]
Length = 289
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 38/251 (15%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++PD A +IN + V F E L LIH STD V+
Sbjct: 50 RPGLIINAAAHTAVDQAESEPDVAFAINATAPGV-----FAEEARALGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K+ Y E+D P+ VYG SK+A E+ I ILR+S +Y S K+
Sbjct: 105 DGSKAAPYNEDDATHPLGVYGASKLAGERAIVAVGGEHLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLS---------------ED 236
+ + +L + + D+ P + + AL W + E
Sbjct: 160 LT-MQRLLQEKPHMRIVADQIGAPTWAGTIANSTRALIEHWQAGQAGAWGVYHLTAQGET 218
Query: 237 KQMQLLLNVGGPDRVSRVQMAEVD--------RGVQSPADISMDITKLVQTLNIDPVTYK 288
+G R+ AE++ + P + +D ++L Q ++ +
Sbjct: 219 SWFGFAQAIGEQLRIEGKACAELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPQWH 278
Query: 289 DGVKLTLAAEA 299
D ++ LA +A
Sbjct: 279 DALRECLAEQA 289
>gi|423654094|ref|ZP_17629393.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD200]
gi|401296561|gb|EJS02178.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD200]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + E++ + YD+ P + LLD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELDSEEYDI------YPFDKKLLD------------VT 40
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
+ S V + +P ++++CAA + E + D A IN + + V S K
Sbjct: 41 NISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYISTDYVFQGARPDGYDEFHSPAPINIYGASKYTGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V + + + +++ D+ P YV D+ +I L +
Sbjct: 157 YGNNFVKTMMRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|407712400|ref|YP_006832965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
gi|407234584|gb|AFT84783.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phenoliruptrix
BR3459a]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 77 PDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVK 136
P ++VN AA + E D D+AM +N + V L+ L+H STD V++G K
Sbjct: 57 PGLIVNPAAHTAVDKAETDIDAAMRLNAEAPGV--LAEEARRVGAALVHYSTDYVFDGTK 114
Query: 137 -SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
Y E+D + P NVYGKSK+A E+ I E + I R+S +YG +
Sbjct: 115 VGAYVEDDAVNPQNVYGKSKLAGEQAIAESGCSHLIFRTSWVYGTR 160
>gi|418936363|ref|ZP_13490086.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. PDO1-076]
gi|375056930|gb|EHS53131.1| dTDP-4-dehydrorhamnose reductase [Rhizobium sp. PDO1-076]
Length = 295
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 45/251 (17%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL-LIHLSTDQVY 132
+PD +V+ AA + E++ A ++N P+++ N+ + ++HLSTD V+
Sbjct: 55 KPDAIVSAAAYTAVDKAESEEALAFAVNAHGPTTVAE-----VANELGIPIVHLSTDYVF 109
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
G K FY E DE PV+ YG+SK+A E + N AILR++ +Y P
Sbjct: 110 TGDKDGFYNEADETGPVSAYGRSKLAGELGVAAANPNHAILRTAWVYSP---------FG 160
Query: 192 IQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSE-DKQMQLLLNVGG 247
++ ++L E V D+ P D+ ++++ R ++ D +++ + ++ G
Sbjct: 161 ANFMKTMLRLAETRDSVNVVADQFGTPTSALDIADAVISVARRLSTDLDPKLRGVFHLTG 220
Query: 248 PDR-----------------------VSRVQMAEVDRGVQSPADISMDITKLVQTLNIDP 284
+ R+ A+ + PA+ + KL QT I
Sbjct: 221 GGEATWADFAEMIFSGLHARSGKHVSIGRITAADYPTPAKRPANSRLSNEKLKQTYGITA 280
Query: 285 VTYKDGVKLTL 295
+K+ K+ L
Sbjct: 281 PDWKESAKVVL 291
>gi|355673227|ref|ZP_09058824.1| hypothetical protein HMPREF9469_01861 [Clostridium citroniae
WAL-17108]
gi|354814693|gb|EHE99292.1| hypothetical protein HMPREF9469_01861 [Clostridium citroniae
WAL-17108]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +VNCA ++ C + + A +N + LS + L+ STD V++G
Sbjct: 52 RPHFIVNCAGMTDLGQCGQNKEEAFKVNALGA--RNLSIAARMGKARLVQFSTDDVFDGN 109
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
Y E D AP+ VYGKSK+A E F+ E CS I+RSS I+G SP ++
Sbjct: 110 SRIPYTEFDTPAPLTVYGKSKLAGENFVREFCSRHIIIRSSWIFGEG--SPY-----LET 162
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRV 254
I + +G+ ++ D+ P +++ + + L + ED L +V G SR
Sbjct: 163 ILDMAQRGKTIQAAGDQFASPTGAKELAEKAVELM--YHGEDG----LYHVTGRGICSRY 216
Query: 255 QMAEV 259
+ A+
Sbjct: 217 EFAKA 221
>gi|392958029|ref|ZP_10323548.1| spore coat polysaccharide synthesis [Bacillus macauensis ZFHKF-1]
gi|391876014|gb|EIT84615.1| spore coat polysaccharide synthesis [Bacillus macauensis ZFHKF-1]
Length = 283
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +PDVV++CAA + E+D A SIN + +++ + + I++STD V
Sbjct: 46 LRTYRPDVVIHCAAYTRVEQAESDAHQAYSINGLGAY--YVAKACQEVQAQFIYISTDYV 103
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSL 190
++G K Y+ D + P+NVYG SK E+ C+ ++R+S +YG K+
Sbjct: 104 FDGQKRTPYETSDRVRPLNVYGMSKWLGEELALAACARAKVVRTSWLYGH------GKAN 157
Query: 191 PIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ + + + E+V ++ P Y D+V ++AL
Sbjct: 158 FVNTMRASAIREEEVAVICEQWGSPTYAPDLVHAVMAL 195
>gi|261349841|ref|ZP_05975258.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2374]
gi|288860625|gb|EFC92923.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM
2374]
Length = 280
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 21/164 (12%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K +PD+V+N AA + CE + + A S+N V L+ + L+H+STD +
Sbjct: 46 IKENKPDIVINSAAYTNVDGCEENQELAFSVN--GEGVRNLAIGCREADCPLVHISTDYI 103
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG------PQTIS 184
+ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG P+T+
Sbjct: 104 FNGKNDTPWVEDDEIGPISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTML 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ K+ +++ +DE P Y D+ + I L
Sbjct: 164 ELAKT------------HDELTVVYDEVGTPTYTLDLAEAIGKL 195
>gi|228920042|ref|ZP_04083391.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423579526|ref|ZP_17555637.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD014]
gi|423638016|ref|ZP_17613669.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD156]
gi|228839498|gb|EEM84790.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401217988|gb|EJR24673.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD014]
gi|401272818|gb|EJR78809.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus VD156]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 39/233 (16%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD---V 59
K+RV++ G G LG+ L + E+ + YD+ A FD +
Sbjct: 2 KERVIITGANGQLGKQLFE---ELNSEEYDIYA---------------------FDKKLL 37
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTEN 118
D+ + S V + +P ++++CAA + E + D A IN + + V S
Sbjct: 38 DVTNISRIQQVVQEI-KPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGA 96
Query: 119 KENLLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSII 177
K L+++STD V++G + Y E APVN+YG SK A E+F+ E + + I+R+S +
Sbjct: 97 K---LVYISTDYVFQGARPEGYDEFHSPAPVNIYGASKYAGEQFVKELHNKYFIVRTSWL 153
Query: 178 YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
YG + V + + + +++ D+ P YV D+ +I L +
Sbjct: 154 YGKYGNNFVKTMIRLG------KERDEISVVADQVGSPTYVADLNMVINKLIH 200
>gi|237813646|ref|YP_002898097.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei MSHR346]
gi|237504781|gb|ACQ97099.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei MSHR346]
Length = 280
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S + + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLFDACS----RRWRTLGTSTRDGADIVFSLARAEAFPYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACAKDYEAAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWNAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
>gi|229132120|ref|ZP_04260979.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196]
gi|228651340|gb|EEL07316.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196]
Length = 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+R+++ G G LG+ L + E+ + YD+ P + LLD S +
Sbjct: 2 KERIIITGANGQLGKQLQE---ELNSEEYDI------YPFDKKLLDVTNISRI------- 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
++ +P +V+CAA + E + D A IN + + V S K
Sbjct: 46 ------KQVVQEIKPHTIVHCAAYTKVDGAEKEQDLAYLINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V+ G K Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYVSTDYVFPGDKPDGYHEFHNPAPINIYGASKFAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + + E + D+ P YV D++ +I L
Sbjct: 157 YGNNFVKTMLRLG------KERENISVVADQVGSPTYVADLITVINKL 198
>gi|296125191|ref|YP_003632443.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM
12563]
gi|296017007|gb|ADG70244.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM
12563]
Length = 276
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K++L++GGTG LG +++ I K YDV T+ + + F + D
Sbjct: 2 KKILILGGTGMLGNTVVRHF--INNKNYDVHFTYRNEKVA------------FDNFDKNK 47
Query: 64 GSGFDAVALKFGQPD----VVVNCAALSVPRVCENDPDSAMSINV-PSSLVNWLSSFTEN 118
G FD++ + V+NC + P + N DS ++ P + NW
Sbjct: 48 GIKFDSLTDNINNLNKDFNYVINCIGIIKPFMFNNMRDSIFINSIFPWNAANWCKE---- 103
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
K IH++TD V++G+K Y E DE ++ YGKSK E KC ILR+SII
Sbjct: 104 KNIKFIHITTDCVFDGLKGKYNELDEHNALDEYGKSKSLGEP--RGKC---MILRTSII- 157
Query: 179 GPQTISPVPKSLP-IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
G + + K+ I W S KG+ V F + + + I + L E+
Sbjct: 158 GEE----IHKNASLICWAKS--QKGKSVNGFLNHFWNGITTKQYATICEQIIENNLYEED 211
Query: 238 QMQLLLNVGGPDRVSRVQMAE 258
L ++ D VS+ QM E
Sbjct: 212 ----LFHIHSKDIVSKYQMLE 228
>gi|295102417|emb|CBK99962.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii
L2-6]
Length = 304
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V G G LG +++ L E P+P+ L+ A ++D+ +
Sbjct: 2 KIIVTGCRGQLGTEIIKQLRE---------GRSELGPIPEKLVSATVIPVDLPELDITNY 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKENL 122
D ++ +PDV++NCAA + CE + D+A N P +L +
Sbjct: 53 KMVDDF-IRRQRPDVIINCAAFTNVDGCEVNHDTAFKANAIGPRNLAQAATKTGAR---- 107
Query: 123 LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
L+H+STD V+ G ++ +DE P++ YG +K+ EK++ + C I+R++ +Y
Sbjct: 108 LVHVSTDYVFSGRENGGIPQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLY- 166
Query: 180 PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
S K+ ++ I + K K+E +D+C P D+ IL L
Sbjct: 167 ----SYYGKNF-VKTIVNAGKKFGKLEVVNDQCGNPTNAVDLAHEILQL 210
>gi|171463074|ref|YP_001797187.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192612|gb|ACB43573.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 317
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 70 VALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTD 129
ALK +P++++N +A + E + D A ++N + + ++ + + L+H STD
Sbjct: 49 AALKAAKPNLIINASAYTAVDKAETEVDLAFAVNAKAPEI--MARYAAENDATLLHYSTD 106
Query: 130 QVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSN-----FAILRSSIIYG 179
V++G K Y E+D P+ VYGKSK A E+ I + +N FAI R+S +YG
Sbjct: 107 YVFDGSKDGLYMEDDPRNPLGVYGKSKAAGEEAIEKVFANSSKGQFAIFRTSWVYG 162
>gi|298377135|ref|ZP_06987089.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19]
gi|298266119|gb|EFI07778.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19]
Length = 287
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 40/234 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G G LG + +S+ G ++F+F D+D
Sbjct: 2 KTVLVTGANGQLGSSIHARISQYPG-----------------------YNFLFTDIDTLD 38
Query: 64 GSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+AV + DV V+NCAA + E D M IN V L
Sbjct: 39 ICDKEAVRKYVLENDVQYVMNCAAYTAVDKAEEHEDLCMRIN--RDAVRNLGEAAHAVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D PV+VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 KVIHVSTDYVFDGTSCRPYLESDATCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +VL G +++ F D+ P Y D+ +L + R
Sbjct: 155 -------SEYGNNFMKTVLRLGKERDELRFIFDQVGTPTYAGDLAVAMLTVLER 201
>gi|383320424|ref|YP_005381265.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
gi|379321794|gb|AFD00747.1| dTDP-4-dehydrorhamnose reductase [Methanocella conradii HZ254]
Length = 288
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS--FYKEEDEIAPVN 149
CE + AM N V + + ++ + +LS+ V++G KS Y E D + P+N
Sbjct: 73 CEKNRLDAMEFNTRG--VRFFVEASLPLKSRVTYLSSAYVFDGRKSGGLYTEYDHVNPIN 130
Query: 150 VYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFH 209
VYG++K+ E + +K ++ LR +YG P + ++++ S L+ G+K+E
Sbjct: 131 VYGETKLMGEVAV-DKAADHLTLRLGEVYGSH-----PDNF-VKYVLSGLTYGQKIELAR 183
Query: 210 DECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLNVGGPDRVSRVQMA------------ 257
D P+Y+ DV + + L + + L N+ GP+R+S +M
Sbjct: 184 DMYFSPIYIEDVARAVSLLVK------ENIGGLYNLAGPERLSHYEMGVRIARAFDKDED 237
Query: 258 --------EVDRGVQSPADISMDITKLVQTLNIDPV 285
E+ V+ P D+S+D +K+ + I V
Sbjct: 238 LLVPLSMEEMGFTVRMPKDLSLDASKISALIKIRGV 273
>gi|167740009|ref|ZP_02412783.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 14]
Length = 280
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S + + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLFDACS----RRWRTLGTSTRDGADIVFSLARAEAFPYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACAKDYETAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRQVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
>gi|405983169|ref|ZP_11041479.1| dTDP-4-dehydrorhamnose reductase [Slackia piriformis YIT 12062]
gi|404389177|gb|EJZ84254.1| dTDP-4-dehydrorhamnose reductase [Slackia piriformis YIT 12062]
Length = 281
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG- 134
+PDVVVNCA LS + E DP A +N + ++S L++HLSTD +Y G
Sbjct: 54 RPDVVVNCAGLSSKELAEQDPTRAYKVNALGARNLAIASAAVG--GLIVHLSTDDLYPGS 111
Query: 135 VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
++ E D+ P +VYGKSK A E + E I+RSS +Y +LP +
Sbjct: 112 IQHPVNEFDKTLPPHVYGKSKEAGETLVRELNPRHIIVRSSWVY---------TALPTDY 162
Query: 195 IDSVLS---KGEKVEFFHDECRCPV 216
+ ++ KGE +E ++ P
Sbjct: 163 LVRIIEMSRKGETIEVPANQFASPT 187
>gi|53720407|ref|YP_109393.1| capsular polysaccharide biosynthesis protein [Burkholderia
pseudomallei K96243]
gi|53725819|ref|YP_103860.1| capsular polysaccharide biosynthesis protein [Burkholderia mallei
ATCC 23344]
gi|76809513|ref|YP_334666.1| protein WcbJ [Burkholderia pseudomallei 1710b]
gi|126451289|ref|YP_001081705.1| capsular polysaccharide biosynthesis protein [Burkholderia mallei
NCTC 10247]
gi|126455412|ref|YP_001067517.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|167721037|ref|ZP_02404273.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei DM98]
gi|167817227|ref|ZP_02448907.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 91]
gi|167825639|ref|ZP_02457110.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 9]
gi|167895708|ref|ZP_02483110.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 7894]
gi|167912360|ref|ZP_02499451.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 112]
gi|167920315|ref|ZP_02507406.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BCC215]
gi|217421110|ref|ZP_03452615.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|242317963|ref|ZP_04816979.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|254178863|ref|ZP_04885517.1| putative capsular polysaccharide biosynthesis protein [Burkholderia
mallei ATCC 10399]
gi|254191625|ref|ZP_04898128.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254194992|ref|ZP_04901422.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|254202565|ref|ZP_04908928.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei FMH]
gi|254207902|ref|ZP_04914252.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei JHU]
gi|254260553|ref|ZP_04951607.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
gi|254299120|ref|ZP_04966570.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|254355955|ref|ZP_04972233.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|386860626|ref|YP_006273575.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1026b]
gi|418378007|ref|ZP_12966017.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 354a]
gi|418539089|ref|ZP_13104690.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1026a]
gi|418539869|ref|ZP_13105444.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1258a]
gi|418546119|ref|ZP_13111351.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1258b]
gi|418552568|ref|ZP_13117426.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 354e]
gi|13446696|gb|AAK26465.1|AF285636_17 WcbJ [Burkholderia mallei]
gi|13932339|gb|AAK49805.1| WcbJ [Burkholderia pseudomallei]
gi|52210821|emb|CAH36807.1| putative capsular polysaccharide biosynthesis protein [Burkholderia
pseudomallei K96243]
gi|52429242|gb|AAU49835.1| capsular polysaccharide biosynthesis protein, putative
[Burkholderia mallei ATCC 23344]
gi|76578966|gb|ABA48441.1| WcbJ [Burkholderia pseudomallei 1710b]
gi|126229054|gb|ABN92594.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|126244159|gb|ABO07252.1| putative capsular polysaccharide biosynthesis protein [Burkholderia
mallei NCTC 10247]
gi|147746812|gb|EDK53889.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei FMH]
gi|147751796|gb|EDK58863.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei JHU]
gi|148024930|gb|EDK83108.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|157808774|gb|EDO85944.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|157939296|gb|EDO94966.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|160694777|gb|EDP84785.1| putative capsular polysaccharide biosynthesis protein [Burkholderia
mallei ATCC 10399]
gi|169651741|gb|EDS84434.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|217396522|gb|EEC36539.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|242141202|gb|EES27604.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|254219242|gb|EET08626.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
gi|385346770|gb|EIF53445.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1026a]
gi|385363618|gb|EIF69385.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1258a]
gi|385365512|gb|EIF71186.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1258b]
gi|385372888|gb|EIF77972.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 354e]
gi|385377794|gb|EIF82339.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 354a]
gi|385657754|gb|AFI65177.1| capsular polysaccharide biosynthesis protein WcbJ, NAD-dependent
epimerase [Burkholderia pseudomallei 1026b]
Length = 280
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S + + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLFDACS----RRWRTLGTSTRDGADIVFSLARAEAFPYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACAKDYETAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
>gi|326799491|ref|YP_004317310.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
gi|326550255|gb|ADZ78640.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 33/234 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+++V+GG G LGQ LQ + E D A S+ + D+ +
Sbjct: 3 KIIVLGGQGQLGQ-CLQSVCE------DKAMVFLSSK----------------EADISNE 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + +++ P ++NCAA + E++ + A IN + + L+ + + +LI
Sbjct: 40 AQLEQWFIQYN-PSHIINCAAYTAVDKAEDEKEEASKINTIAPGI--LARLCKRFDAILI 96
Query: 125 HLSTDQVYEGVKSFYKEEDEIA-PVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+EG ++ EE IA P VYG++K+ E I + + I+R+S +Y
Sbjct: 97 HISTDFVFEGNQTGLLEETSIANPTGVYGQTKLDGETTIQQIWNKHIIIRTSWLYSEYAN 156
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
+ V L + E+++ D+ P Y RD+ +++ + + ++ED+
Sbjct: 157 NFVKTMLRLA------QDREELKVVADQVGTPTYARDLAEVLCKIIDNNITEDE 204
>gi|407937339|ref|YP_006852980.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. KKS102]
gi|407895133|gb|AFU44342.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. KKS102]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+PDV+VN AA + E++PD A ++N + + E L L+H STD V+
Sbjct: 54 RPDVIVNAAAHTAVDKAESEPDLARTLNATTP-----GAIAEEAAKLGSWLVHYSTDYVF 108
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
+G S + E D AP++VYG++K+ E+ I E C+ ILR+S +Y +
Sbjct: 109 DGSGSRPWLETDAPAPLSVYGRTKLEGEQLIAEACAKHLILRTSWVYAAR 158
>gi|309780787|ref|ZP_07675528.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA]
gi|404394307|ref|ZP_10986111.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_2_56FAA]
gi|308920469|gb|EFP66125.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA]
gi|348613337|gb|EGY62927.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_2_56FAA]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D +A ++N S+ L+ T +LL+H STD V++G
Sbjct: 58 RPDVIVNPAAYTAVDKAETDAQTAFAVN--STAAGVLAEETRALGSLLVHYSTDYVFDGT 115
Query: 136 K-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K Y E D + P +VYGKSK+A E+ I + + ++R+ + G + L +
Sbjct: 116 KDGAYVETDPVNPQSVYGKSKLAGEEAIAQSGATALVMRTCWVAGAHGGNFAKTMLKLG- 174
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSED----------------- 236
+ + + D+ P + + + R WL+ D
Sbjct: 175 -----RERDSLRVIADQFGAPTTAALIADVTAQIVARAWLAGDRAAFPSGVYHLAAAGET 229
Query: 237 -------------KQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
K + + L V PDR+ + PA+ M+ KLV+T +
Sbjct: 230 TWHGYATAVLRYAKALGVELKV-DPDRIEAIPATAYPLPAPRPANSRMNTGKLVETFGVH 288
Query: 284 PVTYKDGVKLTL 295
++ G+ L L
Sbjct: 289 LPDWQRGIHLLL 300
>gi|301310888|ref|ZP_07216817.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3]
gi|423339255|ref|ZP_17316996.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis
CL09T03C24]
gi|300830951|gb|EFK61592.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3]
gi|409231157|gb|EKN24014.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis
CL09T03C24]
Length = 287
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 40/234 (17%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
K VLV G G LG + +S+ G ++F+F D+D
Sbjct: 2 KTVLVTGANGQLGSSIHARISQYPG-----------------------YNFLFTDIDTLD 38
Query: 64 GSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
+AV + DV V+NCAA + E D M IN V L
Sbjct: 39 ICDKEAVRKYVLENDVQYVMNCAAYTAVDKAEEHEDLCMRIN--RDAVRNLGEAAHAVGA 96
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
+IH+STD V++G Y E D PV+VYG++K+A E+ + E C + I+R++ +Y
Sbjct: 97 KVIHVSTDYVFDGTSCRPYLESDATCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLY-- 154
Query: 181 QTISPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILALTNR 231
++ +VL G +++ F D+ P Y D+ +L + R
Sbjct: 155 -------SEYGNNFMKTVLRLGKERDELRFIFDQVGTPTYAGDLAVAMLTVLER 201
>gi|416051356|ref|ZP_11577404.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|444334890|ref|ZP_21150300.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|5545319|dbj|BAA82534.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus
actinomycetemcomitans]
gi|347992789|gb|EGY34166.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|443549762|gb|ELT58405.1| dTDP-4-keto-L-rhamnose reductase [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 292
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 130/314 (41%), Gaps = 57/314 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGHCLTQ---QLQGK-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 SAVKKTVKNF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAEAAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D P ++YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDATDPQSIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGKSVEYGIY 211
Query: 244 NVGGPDRVSRVQMAEV--DRGV-----------------------QSPADISMDITKLVQ 278
+ G VS A D V + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKVPLVNAITTADYPTPAKRPANSCLDLTKIQQ 271
Query: 279 TLNIDPVTYKDGVK 292
I P ++ +K
Sbjct: 272 VFGIQPSDWQRALK 285
>gi|261367243|ref|ZP_05980126.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM
15176]
gi|282570844|gb|EFB76379.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM
15176]
Length = 300
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 25/182 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L L+E EG PLP+ L A + + DVD
Sbjct: 2 KILITGCRGQLGTELQHQLAE-EGCVLG--------PLPERLRKA---TVIPVDVDELDI 49
Query: 65 SGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINV--PSSLVNWLSSFTENKE 120
+ +A ++ QPD V+NCAA + CE D+A ++N P +L + +K
Sbjct: 50 TDREATISYIRRHQPDTVINCAAFTNVNGCETSRDAAFTVNAIGPRNL-----ALACDKV 104
Query: 121 NL-LIHLSTDQVYEGVKSFYKEEDEI---APVNVYGKSKVAAEKFIYEKCSNFAILRSSI 176
N LIH+STD V+ G + DE AP++ YG++K+ E+++ C I+R++
Sbjct: 105 NARLIHISTDYVFSGAPNGGVALDECALPAPISAYGQTKLLGEQYVERFCRRHIIVRTAW 164
Query: 177 IY 178
+Y
Sbjct: 165 LY 166
>gi|420149497|ref|ZP_14656673.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753720|gb|EJF37227.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 278
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 48/294 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV GG+G LG SEI+ P+ + ++ T + L + D+++
Sbjct: 3 VLVTGGSGQLG-------SEIQANPHK-KSCYYFTDINSLDI-----------CDVQAIR 43
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
F ++ DV+VNCAA + V + + DSA++ + + V L++ + LIH
Sbjct: 44 AF----VQLNNIDVIVNCAAYT--NVDKAEDDSALATLINHTAVENLATVCKEHNLPLIH 97
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V+ G K+ Y E D P+ VYG++K+A E+ I + I+R++ +Y +
Sbjct: 98 ISTDYVFGGSKNTPYTETDPTTPLGVYGRTKLAGEQAIQQAGIEHLIIRTAWLYSLRFGH 157
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-ALTNRWLSEDKQMQLLL 243
K+ I + ++ +++ D+ P D+ I+ A+ N W +++
Sbjct: 158 NFVKT-----IRRLSAERTELKVVFDQVGTPTNASDLADFIVQAVENLWYKGKREVYHFS 212
Query: 244 N----------------VGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLN 281
N G +VS + E V PA +D TKL + N
Sbjct: 213 NEGVCSWYDFAVTIVAQSGNNCKVSPCRSDEFPSKVTRPAYSVLDKTKLKKDFN 266
>gi|433776257|ref|YP_007306724.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium australicum
WSM2073]
gi|433668272|gb|AGB47348.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium australicum
WSM2073]
Length = 299
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLS 127
A+ +PD+VV+ AA + E++PD A ++N + E L +IHLS
Sbjct: 47 AIAGAKPDIVVSAAAYTAVDQAEDEPDLAFAVNATGA-----GKVAEAAARLGVPVIHLS 101
Query: 128 TDQVYEGVKS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPV 186
TD V++G K+ Y E D AP+ VYG SK+A E+ + ILR++ +Y SP
Sbjct: 102 TDYVFDGTKADAYIETDPTAPLGVYGASKLAGEQAVASANPRHLILRTAWVY-----SPF 156
Query: 187 PKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL 226
K+ ++ + + + +++ D+ P DV IL
Sbjct: 157 GKNF-VKTMLRLAADRDEISVVSDQWGNPTSALDVADAIL 195
>gi|228994851|ref|ZP_04154648.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM
12442]
gi|228764898|gb|EEM13655.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM
12442]
Length = 280
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 31/219 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VLV G G LG+ + +E +G D L +SF ++D+
Sbjct: 2 KVLVTGAGGQLGKEFIAYFTE-KG-------------------DTL-YSFTRKELDVTDA 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ + + +K +PD+V++CAA + E + A ++N + ++ +E L+
Sbjct: 41 TSLNPI-MKSLKPDLVLHCAAYTKVDAAEENWKEAYAVNALGTRN--IAVASEAIGAKLV 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
+ STD V++G+ + Y E D+ P+NVYG SK+A E+ + S + I+R+S +YG +
Sbjct: 98 YFSTDYVFDGMHARDYHEFDQTNPLNVYGASKLAGEEAVRNFHSRYFIMRTSWLYGGEGP 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVV 222
+ V + ++ +++ D+ CP Y +D+V
Sbjct: 158 NFVRT------MQTLAQTKKELRVVCDQIGCPTYTKDLV 190
>gi|171057311|ref|YP_001789660.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6]
gi|170774756|gb|ACB32895.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L++G G LG L + L+ PL +L+ AL F DL
Sbjct: 2 KILLLGKNGQLGWELQRALA----------------PLGELI--ALDRHATDFAADLAQP 43
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
A ++ QP V+VN AA + E++P+ A ++N S V L+ L+
Sbjct: 44 DSL-AATVRALQPQVIVNAAAYTAVDKAESEPELARTVNATSPGV--LAQAAAEAGAWLL 100
Query: 125 HLSTDQVYEGVKSFYKEEDE-IAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
H STD V++G + + ED AP+NVYG++K+ E I ILR+S +Y +
Sbjct: 101 HYSTDYVFDGSGTAARSEDAATAPLNVYGQTKLEGEAAIRASGCRHLILRTSWVYAAR 158
>gi|344173874|emb|CCA89060.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia syzygii R24]
Length = 305
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 41/252 (16%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PDV+VN AA + E D D+A ++N ++ V L+ +LL+H STD V++G
Sbjct: 58 RPDVIVNPAAYTAVDKAETDADAAFAVNGTAAGV--LAEEARALGSLLVHYSTDYVFDGS 115
Query: 136 KS-FYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E D + P +VYGKSK+A E+ I + +LR+ + G + L +
Sbjct: 116 KAGAYVESDAVNPQSVYGKSKLAGEQAITASGAAALVLRTCWVAGAHGGNFAKTMLKLG- 174
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR-WLSED----------------- 236
+ + + D+ P + + + R WLS D
Sbjct: 175 -----RERDSLRVIADQFGAPTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAAAGET 229
Query: 237 -------------KQMQLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
K L L V P+R+ + PA+ M+ KL +T I
Sbjct: 230 TWHGYATAVLRYAKARGLELKV-DPERIEAIPATAYPLPAPRPANSRMNTGKLTETFGIH 288
Query: 284 PVTYKDGVKLTL 295
++ GV L L
Sbjct: 289 LPDWQQGVHLLL 300
>gi|115279711|gb|ABI85327.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
gi|115279743|gb|ABI85359.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|29725991|gb|AAO88923.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|226291193|gb|EEH46621.1| NAD dependent epimerase/dehydratase family protein
[Paracoccidioides brasiliensis Pb18]
Length = 323
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 19/266 (7%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+ VL+ G TG LG+ +L E + + S P A DL
Sbjct: 3 RTVLITGATGLLGRQVLNAF-ERDSLNWKTIGQGFSRAGPGTA--ASDTDAEIIKADLTD 59
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S A+ L +P VVV+CAA P C+ D D+A INV ++ L+ T + LL
Sbjct: 60 ESEIVAL-LDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAAT--KSLARETSARSILL 116
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K E + E+ +LR ++Y
Sbjct: 117 IYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQSGLGVVLRVPVLY 176
Query: 179 GP---QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSE 235
GP + S V + W ++ G K++ + R P + DV ++ + ++L +
Sbjct: 177 GPTKQNSESAVNVLVDAVWKAQDVNAGIKMDDW--AIRYPTHTADVGRVCHDIAVKYLGD 234
Query: 236 DKQMQLL---LNVGGPDRVSRVQMAE 258
++ ++ L L DR+++ ++ +
Sbjct: 235 EEDVKALPRILQFSSEDRMTKYEICQ 260
>gi|336313027|ref|ZP_08567971.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. HN-41]
gi|335863412|gb|EGM68564.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. HN-41]
Length = 300
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
+V G TG LG+ +++ L E+ G ++V AT S + L H D
Sbjct: 1 MVTGATGLLGRAVVKQL-ELTG--HEVVATGFSRASDSVHRLDLTHPSEVADF------- 50
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHL 126
+ P V+V+CAA P V E +P +A+++N+ +S + + LI++
Sbjct: 51 -----VSRHSPQVIVHCAAERRPDVSEQNPQAALALNLSASQAL--AQAAKANHAWLIYI 103
Query: 127 STDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
STD V++G + Y E+ PVN YG+SK E+ + +FA+LR I+YG
Sbjct: 104 STDYVFDGTQPKYAEDAATHPVNFYGESKRKGEEIVLGIDPDFAVLRLPILYG 156
>gi|373953329|ref|ZP_09613289.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM
18603]
gi|373889929|gb|EHQ25826.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM
18603]
Length = 286
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
R++V+G +G LGQ L E + A S L ++AL +F ++
Sbjct: 2 NRIIVLGASGQLGQSLKFVTGENATGEFFFLAEEESNILD---VNALTKAFATYN----- 53
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P+ +NCAA + E D D+A +N V ++ + + L
Sbjct: 54 -------------PNYCINCAAYTAVDKAEGDLDTARKVNRDG--VENIAKLCKEFDTTL 98
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
IH+STD V++G + E D P+N YG +K+ E I E N+ ILR+S +Y
Sbjct: 99 IHVSTDFVFDGNSPYPLSEMDTPNPINAYGITKLEGEVVISEYIDNYYILRTSWLYSEFG 158
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V L + + ++ D+ P Y D+ + I+A+ N
Sbjct: 159 ANFVKTMLKLA------KEKSELNIISDQVGTPTYAIDLAQAIVAIIN 200
>gi|296136996|ref|YP_003644238.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12]
gi|295797118|gb|ADG31908.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12]
Length = 302
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M+ R+L++G G +G L + L LP L D P + D+
Sbjct: 1 MNPPRILLLGADGQVGWELRRAL------------------LP--LGDVRPLNRTQADL- 39
Query: 61 LKSGSGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
DA+ L+ QP+++VN AA + E DP+ A IN + V L+++
Sbjct: 40 ----GDLDALRTVLQREQPELIVNAAAYTAVDKAETDPELAQRINAAAPGV--LAAWAAE 93
Query: 119 KENLLIHLSTDQVYEGVK---SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+L+H STD V++G K Y E D P + YG+SK+A E+ I ILR+S
Sbjct: 94 HHAMLVHYSTDYVFDGAKPAPGSYTEADTPNPQSAYGRSKLAGEQAITASGCRHLILRTS 153
Query: 176 IIYG 179
+Y
Sbjct: 154 WVYA 157
>gi|119485671|ref|ZP_01619946.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106]
gi|119456996|gb|EAW38123.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E + + A +IN S+ L+ + LIH+STD V++G
Sbjct: 51 KPDLIVNAAAYTAVDKAETEQNLAQAIN--STAPGILAKQAQEIGATLIHVSTDYVFDGS 108
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
+S Y E D P+ VYG+SK+A E+ I +N AI+R++ +YG K++
Sbjct: 109 QSHPYLETDPTQPLGVYGQSKLAGEQAILSTQANAAIVRTAWVYGVGGKGNFVKTML--- 165
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ ++ E++ D+ P + D+ + I+ L+ +
Sbjct: 166 --RLGAEREELRVVCDQVGSPTWTGDLAEAIVQLSQQ 200
>gi|29725986|gb|AAO88919.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|410694747|ref|YP_003625369.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Thiomonas sp. 3As]
gi|294341172|emb|CAZ89573.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase)
(dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose
synthetase) [Thiomonas sp. 3As]
Length = 302
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ QP+++VN AA + E DP+ A IN + V L+++ +L+H STD V
Sbjct: 49 LQREQPELIVNAAAYTAVDKAETDPELAQRINAAAPGV--LAAWAAEHHAMLVHYSTDYV 106
Query: 132 YEGVK---SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++G K Y E D P + YG+SK+A E+ I ILR+S +Y
Sbjct: 107 FDGAKPAPGSYTEADTPNPQSAYGRSKLAGEQAITASGCRHLILRTSWVYA 157
>gi|322696186|gb|EFY87982.1| NAD dependent epimerase/dehydratase family protein [Metarhizium
acridum CQMa 102]
Length = 327
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 42/245 (17%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P V+V+ AA P + DP+ A ++N+ +S L+ +++ LLI++STD V+ G+
Sbjct: 68 KPHVIVHSAAQRFPDRVDKDPEGARALNIAAS--RRLAQVALSRDILLIYISTDYVFPGI 125
Query: 136 --KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA------ILRSSIIYGPQTISPVP 187
+ Y+ + P N+YG++K E+ I E+ + +LR ++YG +P
Sbjct: 126 PGDAPYEADATPKPTNLYGQTKFDGERAILEEAAKVGKPGSAIVLRVPVLYG-HAETPAE 184
Query: 188 KSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED-----KQM 239
++ + +DSV ++G K++ H R P D+ ++ + ++L + K +
Sbjct: 185 SAVNV-LMDSVWKAQTEGAKIKMDHWAIRYPTNTEDIGRVCRDVAAKYLDANGPGHRKAL 243
Query: 240 QLLLNVGGPDRVSRVQMAEV---------------------DRGVQSPADISMDITKLVQ 278
+L G D++++ ++ ++ + VQ P D + TK +Q
Sbjct: 244 PSILQFSGEDKMTKYEICQLFGQIMGLDTSNIEANTQGNDPNAAVQRPYDCHLS-TKALQ 302
Query: 279 TLNID 283
L ID
Sbjct: 303 DLGID 307
>gi|14521386|ref|NP_126862.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus abyssi GE5]
gi|5458604|emb|CAB50092.1| dTDP 4-dehydrorhamnose reductase (dTDP-L-rhamnose synthetase)
[Pyrococcus abyssi GE5]
gi|380741975|tpe|CCE70609.1| TPA: dTDP-4-dehydrorhamnose reductase [Pyrococcus abyssi GE5]
Length = 283
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V+G G LG L++ E + PL + LD
Sbjct: 2 RVAVIGANGQLGTDLVEVFGE------------EAIPLTRKDLDV--------------- 34
Query: 65 SGFDAVA-LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
+ F+++ LK +P+V++N AA E P+ A +N +L ++ +
Sbjct: 35 TDFESLKILKELKPEVIINTAAYVRVDDAELYPEEAFKVNAIGALN--VARIANEIGAIN 92
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+++STD V++G K Y EED P+NVYG SK E F + I+R + +YG
Sbjct: 93 VYISTDYVFDGAKGEPYTEEDIPNPINVYGASKYIGEIFTRNYSKKYYIIRVASLYGKAG 152
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+ ++W+ +KGE++ +D+ P Y +DV
Sbjct: 153 ARGKGGNF-VEWVIKKANKGEELRIVNDQFMSPTYTKDV 190
>gi|91774152|ref|YP_566844.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM
6242]
gi|91713167|gb|ABE53094.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM
6242]
Length = 261
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 7 LVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGSG 66
+++G +G LG L + P V THH D+D+ +
Sbjct: 1 MIIGASGMLGSDLSRAF------PDAVKFTHH-------------------DLDITNKQQ 35
Query: 67 FDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN--VPSSLVNWLSSFTENKENLLI 124
++ +P VV+N AA + CE++ D A +N P + S +L+
Sbjct: 36 V-LKKIEEIKPYVVINAAAYTNVDGCEDEQDIAFKVNGHAPGYIAQACSDIGA----ILV 90
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
H STD V++G K Y E + P+NVYG+SK+ E+ I + N+ I+R+S ++G +
Sbjct: 91 HFSTDYVFDGSKKEYVESNITKPINVYGQSKLMGEQEIIKNTDNYRIIRTSWLFGKNGKN 150
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
V L + + E V+ +D+ P + D+ + + N
Sbjct: 151 FVDTMLRLS------KEMENVKVVNDQFGKPTHTADIARKTAEIIN 190
>gi|163939118|ref|YP_001644002.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis
KBAB4]
gi|163861315|gb|ABY42374.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis
KBAB4]
Length = 284
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+R+++ G G LG+ L + E+ + YD+ P + LLD S +
Sbjct: 2 KERIIITGANGQLGKQLQE---ELNSEEYDI------YPFDKKLLDVTNISRI------- 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
++ +P +V+CAA + E + D A IN + + V S K
Sbjct: 46 ------KQVVQEIKPHTIVHCAAYTKVDGAEKEQDLAYLINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V+ G K Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYVSTDYVFPGDKPDGYHEFHNPAPINIYGASKFAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + + E + D+ P YV D++ +I L
Sbjct: 157 YGNNFVKTMLRLG------KERENISVVADQVGSPTYVADLITVINKL 198
>gi|375108795|ref|ZP_09755049.1| dTDP-4-dehydrorhamnose reductase [Alishewanella jeotgali KCTC
22429]
gi|374570981|gb|EHR42110.1| dTDP-4-dehydrorhamnose reductase [Alishewanella jeotgali KCTC
22429]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G G LGQ L +E G P L L + S +VD+ +
Sbjct: 7 VLITGANGQLGQALQ---AEAAG-------------FPSLTLISSARS----EVDICDTA 46
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
++ QP V++NCAA + E +P A IN V L++ +L+H
Sbjct: 47 SIGQAIQRY-QPQVIINCAAYTAVDKAEAEPAQAYRINRDG--VANLTAQAALHNIVLLH 103
Query: 126 LSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
+STD V+ G ++ Y E D AP +VYG SK+A E+ + + AI+R+S +Y +
Sbjct: 104 ISTDYVFAGDQAHPYTELDTPAPKSVYGASKLAGEQALLQSGCKGAIIRTSWLYSEFGSN 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
V L + G+ ++ D+ P Y RD+ IL +
Sbjct: 164 FVKTML------RLAQGGKPLKVVADQYGSPTYARDLAIAILQM 201
>gi|392865446|gb|EAS31237.2| dTDP-4-dehydrorhamnose reductase [Coccidioides immitis RS]
Length = 315
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 47/318 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
++ LV G +G LG+ +L + DV + + Q A P V DL +
Sbjct: 3 QKALVTGASGLLGRQVLNAFKK------DV----NWEAVGQGFTRAAPPDIV--KADLTN 50
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
S +++ L +P VVV+CAA P C+ PD A +NV ++ L+ T + LL
Sbjct: 51 PSEIESL-LDEVKPQVVVHCAANRFPDQCDAHPDLARKVNVEATKA--LAKATLQRSILL 107
Query: 124 IHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIY 178
I++STD V+ G ++ Y+ + P N+YG++K+ E + E +LR ++Y
Sbjct: 108 IYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLY 167
Query: 179 G-PQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDK 237
G T S ++ I + KV+ R P DV ++ + ++L E +
Sbjct: 168 GSADTNSESAVNVLIDAVWKAQDADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKYLGEQE 227
Query: 238 Q---MQLLLNVGGPDRVSRVQMAE------------VDR---------GVQSPADISMDI 273
+ +L D+V++ +M E ++R GVQ P D +
Sbjct: 228 RAASFPTILQFSSEDKVTKYEMCERFAEILGLPLSGMERIKQGGTPGNGVQRPFDTHLS- 286
Query: 274 TKLVQTLNIDPVTYKDGV 291
TK ++ L I PV +D V
Sbjct: 287 TKALKELGI-PVDTQDFV 303
>gi|147678912|ref|YP_001213127.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum
SI]
gi|146275009|dbj|BAF60758.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum
SI]
Length = 296
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 131/305 (42%), Gaps = 43/305 (14%)
Query: 4 KRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKS 63
+RVL++G +G +GQ L+ L ++ + TP +L P+ + ++
Sbjct: 7 QRVLIIGSSGTIGQALIPELKKLNAEII--------TPGHNILDITNPYQTKDYIHQVR- 57
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P +V+N AA + E + A IN L+ ++ ++ L
Sbjct: 58 -------------PSLVINAAAFTDVEKSEKEQLKAWKINAYGPLI--VAKICAEQQTPL 102
Query: 124 IHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQT 182
+H STD V+ G K Y EED P+NVYG +K A + F+ + I+R+S ++G
Sbjct: 103 VHFSTDFVFSGEKKQPYTEEDRFNPLNVYGTTKAAGDLFVSHVTDQYYIIRTSRLFG--- 159
Query: 183 ISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL--TN-RW------- 232
+ + +Q I ++ ++ D+ C Y D+ K ++AL TN R+
Sbjct: 160 MGKSRRKDFVQRIIEAITSQPYLKIVDDQVACYTYSNDLAKWLIALFKTNARYGIYNLCN 219
Query: 233 ---LSEDKQMQLLLNVGGPD--RVSRVQMAEVDRGVQSPADISMDITKLVQTLNIDPVTY 287
S K + +L + G ++ ++ AE + P S+ K I P T+
Sbjct: 220 KGECSWYKFAREILKLKGLSFYKIKPIKTAEWPSLAKRPLYSSLSTKKFELVTGIKPRTW 279
Query: 288 KDGVK 292
++ +K
Sbjct: 280 QEALK 284
>gi|229101902|ref|ZP_04232616.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28]
gi|228681485|gb|EEL35648.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28]
Length = 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+RV++ G G LG+ L + LS E YD+ P + LLD S V
Sbjct: 4 KERVIITGANGQLGKQLQEELSPEE---YDI------YPFDKKLLDVTNISRV------- 47
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
++ +P ++++CAA + + E + D A IN + + V S K
Sbjct: 48 ------QQVVQGIRPHIIIHCAAYTKVDLAEKEQDLAYLINAIGARNVAVASQLVGAK-- 99
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V++G + Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 100 -LVYISTDYVFQGARPDGYGEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGK 158
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDV 221
+ V + + + +++ D+ P YV D+
Sbjct: 159 YGSNFVKTMMRLG------KEKDEITVVADQIGSPTYVADL 193
>gi|398952092|ref|ZP_10674554.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM33]
gi|398155589|gb|EJM44028.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. GM33]
Length = 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD+++N AA + + E++P +A +IN + + L+ + LIH STD V++G+
Sbjct: 50 RPDLIINAAAHTAVDLAESEPQTAFAINAIAPGI--LAEEALALDIPLIHYSTDYVFDGL 107
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQW 194
K+ Y E+D P+ VYGKSK+A E+ I + ILR+S +Y + + L +Q
Sbjct: 108 KAGPYNEDDTPNPLGVYGKSKLAGEQAIKDVQGKHLILRTSWVYSNHGRNFL---LTMQ- 163
Query: 195 IDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+L + ++ D+ P + + LAL W + +
Sbjct: 164 --RLLQEKPELRVVADQIGAPTWAGTLANSTLALIEHWQARE 203
>gi|187927733|ref|YP_001898220.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J]
gi|187724623|gb|ACD25788.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J]
Length = 306
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 42/238 (17%)
Query: 2 SKKRVLVVGGTGYLGQHLL---QGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFD 58
S+ R++V G TG +G LL QGL EI + D
Sbjct: 5 SRPRIVVTGTTGQVGWELLRSLQGLGEI----------------------------ISVD 36
Query: 59 VDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFT 116
+ S DAV ++ +P ++VN AA + E +PD A +N + L L+
Sbjct: 37 RSVVDLSRLDAVRALIRSIEPSIIVNAAAYTAVDKAEQEPDPAFRLN--ADLPGVLAEEC 94
Query: 117 ENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSS 175
+ + IH STD V++G K Y E D P+NVYG SK+A E + + R+S
Sbjct: 95 KRTQAAFIHYSTDYVFDGRKDGPYTEADATNPLNVYGASKLAGEHNALDANPATLVFRTS 154
Query: 176 IIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWL 233
+YG + + + I + + +++ D+ P + R + + + R L
Sbjct: 155 WVYGARGKNFLTT------IQRLAKERQQLRVVSDQIGAPTWSRSIADLTAHVIARGL 206
>gi|121719189|ref|XP_001276315.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
clavatus NRRL 1]
gi|119404513|gb|EAW14889.1| NAD dependent epimerase/dehydratase family protein [Aspergillus
clavatus NRRL 1]
Length = 314
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 29/264 (10%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VL+ G TG LG+ + + V + P +L L D D+++
Sbjct: 5 VLITGATGLLGRQVFNTFKH--SGCFVVGQGYSRANPPTILKADLEK-----DGDIRN-- 55
Query: 66 GFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIH 125
L +P +V++CAA P +C+ +P+ A +NV ++ + L+ +++ L+I+
Sbjct: 56 -----LLDEAKPQIVIHCAANRSPDLCDKNPEEARGVNVEATRI--LAEEASSRKALMIY 108
Query: 126 LSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA---ILRSSIIYGP 180
+STD V+ G ++ Y+ + E P N+YG+ K E + E ILR ++YG
Sbjct: 109 ISTDYVFSGKEGEAPYEADAESHPTNLYGQLKRDGELAVLEATKETGLGVILRVPVLYG- 167
Query: 181 QTISPVPKSLPIQWIDSVL-SKGEKVEFFHDEC--RCPVYVRDVVKIILALTNRWLSEDK 237
T +S ID+V S+ EK D+ R P DV ++ + ++L +
Sbjct: 168 -TAQSNSESAVNCLIDAVWKSQDEKAGVKMDDWAQRYPTNTEDVARVCRDIVVKYLKQRP 226
Query: 238 QMQLL---LNVGGPDRVSRVQMAE 258
++ L L DR+++ ++ E
Sbjct: 227 RIHELPKILQFSSEDRMTKYEICE 250
>gi|365968161|ref|YP_004949723.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|416075046|ref|ZP_11584875.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|416081629|ref|ZP_11586480.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|444338249|ref|ZP_21152111.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|444347656|ref|ZP_21155494.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|1944161|dbj|BAA19635.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans]
gi|348006473|gb|EGY46890.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348011002|gb|EGY50998.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|365747074|gb|AEW77979.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443545451|gb|ELT55252.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|443548404|gb|ELT57663.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 57/314 (18%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+ L+ G G +G L Q +++GK +++ A H ++D+ +
Sbjct: 3 KFLITGANGQVGYCLTQ---QLQGK-HEILAVDHD------------------ELDITNQ 40
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ F +PDVV+N AA + E + + + +INV +L+ ++ ++
Sbjct: 41 NAVKKTVENF-RPDVVINAAAHTAVDRAETEIELSEAINVKGP--QYLAETAKSVGAAIL 97
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V++G ++ YKE D + P +YGK+K+A E+ + E F +LR++ ++
Sbjct: 98 HISTDYVFDGRRAGKYKETDAVDPQGIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGS 157
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLL 243
+ V L + L D+ P Y D+ ++ + + ++ + +
Sbjct: 158 NFVKTMLRLAKTRDTLG------VVADQIGGPTYAGDIAAALIQIAEKIIAGESVEYGIY 211
Query: 244 NVGGPDRVSRVQMAEV--DRGV-----------------------QSPADISMDITKLVQ 278
+ G VS A D V + PA+ +D+TK+ Q
Sbjct: 212 HFTGEPYVSWCDFARAIFDEAVSQNMLEKAPLVNAIITADYPTPAKRPANSCLDLTKIQQ 271
Query: 279 TLNIDPVTYKDGVK 292
I P ++ +K
Sbjct: 272 AFGIQPSDWQRALK 285
>gi|58263484|ref|XP_569152.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108330|ref|XP_777116.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259801|gb|EAL22469.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223802|gb|AAW41845.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 303
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 1 MSKKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVD 60
M K V V G +G LG+ + Y ++ L D PH + +D
Sbjct: 1 MVAKNVAVTGASGLLGRAVAA---------YFISQGDQVISLANSRADRDPH---YTKLD 48
Query: 61 LKSGSGFDAVALKFGQPDV--VVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTEN 118
L +AV FG D+ VV+CAA P V E DP+ A IN +++ L+S +
Sbjct: 49 LMDQ---EAVKNFFGSNDIDFVVHCAAERRPDVAEADPEKAAKIN--AAVPAQLASLAKE 103
Query: 119 KENLLIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFI---YEKCSNFAILRSS 175
+ LI++STD V+ G Y+ D P+ +YG+ K+ EK + +EK + ++LR
Sbjct: 104 QGFTLIYISTDYVFNGRNPPYEVNDTPDPLQMYGRQKLDGEKAVLAEHEKGAKVSVLRIP 163
Query: 176 IIYG 179
++YG
Sbjct: 164 VLYG 167
>gi|449544700|gb|EMD35673.1| hypothetical protein CERSUDRAFT_116405 [Ceriporiopsis subvermispora
B]
Length = 302
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLKS 63
R++V G +G LG + E +A + + L +L LLD+ VF D +
Sbjct: 2 RIIVTGASGLLGSQIYAAFKNTEHTVLGLAHSRATGELQKLDLLDSKEVEKVFADFN--- 58
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
P+ V++CAA P V E +PD +NV L L+ +++ + L
Sbjct: 59 -------------PEWVIHCAAERRPDVAEKNPDGTRKLNVEIPL--HLAQLSKSLKYTL 103
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-ILRSSIIYGPQT 182
I++STD V++G Y PVN+YG++K E + A +LR ++YGP
Sbjct: 104 IYISTDYVFDGTSPPYTPGALTNPVNLYGQTKRDGELAVLGVSDARAVVLRVPVLYGP-- 161
Query: 183 ISPVPKSLPIQWIDSVLS--KGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQ 240
+P + + +++ G+ + H R P V D+ ++ L L +Q+
Sbjct: 162 -TPNNTDSAVNILLDIVADQSGKTYKMDHYATRFPTGVVDIADFLVRLAT--LPPSRQIP 218
Query: 241 LLLNVGGPDRVSRVQM 256
+L+ + ++ +M
Sbjct: 219 PILHYSASEPFTKYEM 234
>gi|168481293|gb|ACA24783.1| RmlD [Shigella dysenteriae]
Length = 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A IN S V ++ IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQLINATS--VEAIAKAANEVGAWAIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|153214737|ref|ZP_01949582.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587]
gi|124115173|gb|EAY33993.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587]
Length = 296
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVLV G G +G L+Q LS ++ + L +D +D+
Sbjct: 3 RVLVTGSRGQVGHCLVQQLSTMKEVEF-------------LAVDR-------DQLDITYP 42
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
+ DAV +F +P++++N AA + E + + + +IN ++L+ + ++
Sbjct: 43 AQVDAVVNEF-KPNIIINAAAHTAVDRAEQEIELSYAINRDGP--HYLAQAAQKVGAAIL 99
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H+STD V+ G K + Y E D AP VYG+SK+A E + + C ILR++ ++G
Sbjct: 100 HISTDYVFSGDKPNPYLETDPTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGN 159
Query: 184 SPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + L D+C P Y D+ +L +
Sbjct: 160 NFVKTMLRLAQTRDALG------VVADQCGGPTYAGDIANALLMM 198
>gi|379976145|gb|AFD21077.1| rmlD [Escherichia coli]
gi|379976158|gb|AFD21089.1| rmlD [Escherichia coli]
Length = 299
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A +N ++ V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQLLN--ATGVEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ + I R+S +Y
Sbjct: 112 GEIPWQEADATAPLNVYGETKLAGEKALQEHCAKYLIFRTSWVYA 156
>gi|402701557|ref|ZP_10849536.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fragi A22]
Length = 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
QPD+++N AA + + E++P+ A +IN + V F E L LIH STD V+
Sbjct: 50 QPDLIINAAAHTAVDLAESEPELAFAINGIAPGV-----FAEEAAALGIPLIHYSTDYVF 104
Query: 133 EGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K + Y E+D P+ VYGKSK+A E+ I ++ ILR+S +Y S K+
Sbjct: 105 DGNKPAPYTEDDVPNPLGVYGKSKLAGEQAIAATGADCLILRTSWVY-----STHGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSED 236
+ + +L + ++ D+ P + + + L RW + +
Sbjct: 160 LT-MQRLLQERPELRVVADQVGAPTWAGTIARSTRLLIERWQAAE 203
>gi|148643364|ref|YP_001273877.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii
ATCC 35061]
gi|148552381|gb|ABQ87509.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii
ATCC 35061]
Length = 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 21/164 (12%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
+K +PD+V+N AA + CE + A S+N V L+ + L+H+STD V
Sbjct: 46 IKENKPDIVINSAAYTNVDGCEENQKLAFSVN--GEGVRNLAIGCREADCPLVHISTDYV 103
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG------PQTIS 184
+ G + E+DEI P++VYGKSK+ E+ I E F I+R++ +YG P+T+
Sbjct: 104 FNGKNDTPWVEDDEIGPISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTML 163
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ K+ +++ +DE P Y D+ + I L
Sbjct: 164 ELAKT------------HDELTVVYDEVGTPTYTLDLAEAIGKL 195
>gi|422345042|ref|ZP_16425956.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens
WAL-14572]
gi|373228588|gb|EHP50896.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens
WAL-14572]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L + + + V+ ++ + L +D L D+ S
Sbjct: 2 KILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKL---------DITSL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PDVV+NCAA + CE++ D A +N S L+ E L+
Sbjct: 53 ENVKNV-LNEEKPDVVINCAAATNVDGCESNEDFAFKVN--SLGARNLAMVCEEIGAKLV 109
Query: 125 HLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V+ GV KS E D AP +VYGK+K+ E ++ E CS + I+R++ +YG
Sbjct: 110 QVSTDYVFSGVGEKSL-TEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYG 165
>gi|363582132|ref|ZP_09314942.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriaceae bacterium HQM9]
Length = 285
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 22/185 (11%)
Query: 53 SFVFFDVDLKSGSGFDAVA--LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVN 110
+F+F D+D + + V ++ + +VNCAA + E++P A IN ++
Sbjct: 28 NFIFTDIDELDITNYSKVDTFIQTNKVHSIVNCAAYTAVEKAEDEPLIAKLINHKAT--E 85
Query: 111 WLSSFTENKENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAE---KFIYEKC 166
L+ + E LIH+STD V++G S YKE+D P+N+YGK+K E K I K
Sbjct: 86 NLALVAKKNELPLIHISTDYVFDGNSSVPYKEDDSTNPLNIYGKTKHDGELVLKKINPKK 145
Query: 167 SNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEK---VEFFHDECRCPVYVRDVVK 223
S I+R++ +Y S ++ S+L G++ + +D+ CP Y RD+ +
Sbjct: 146 S--IIIRTAWVYS---------SFGNNFVKSMLRLGKEKNTLNVIYDQIGCPTYARDLAQ 194
Query: 224 IILAL 228
+IL +
Sbjct: 195 LILTI 199
>gi|375091660|ref|ZP_09737949.1| dTDP-4-dehydrorhamnose reductase [Helcococcus kunzii ATCC 51366]
gi|374563182|gb|EHR34504.1| dTDP-4-dehydrorhamnose reductase [Helcococcus kunzii ATCC 51366]
Length = 282
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+P +++NCA++S + CE+ A ++ + L+ ++ ++ LI+LSTD V++G
Sbjct: 55 KPSIIINCASISDRQYCEDHEVEAYRLHAIGARN--LAIASQAYDSHLIYLSTDFVFDGK 112
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPK 188
+ Y E D P VYGKSK+A E F+ + + ILRSS +YG + +S + K
Sbjct: 113 SNKPYNEFDLTNPTTVYGKSKLAGENFVKNLSTRYTILRSSWLYGKKYLSKIKK 166
>gi|423524875|ref|ZP_17501348.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuA4-10]
gi|401169101|gb|EJQ76348.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus HuA4-10]
Length = 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+R+++ G G LG+ L + E+ + YD+ P + LLD S +
Sbjct: 2 KERIIITGANGQLGKQLQE---ELNSEEYDI------YPFDKKLLDVTNISRI------- 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
++ +P +V+CAA + E + D A IN + + V S K
Sbjct: 46 ------KQVVQEIKPHTIVHCAAYTKVDGAEKEQDLAYLINAIGARNVAVASQLVGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V+ G K Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYVSTDYVFPGDKPDGYHEFHNPAPINIYGASKFAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+ V L + + E + D+ P YV D++ +I L +
Sbjct: 157 YGNNFVKMMLRLG------KERENISVVADQVGSPTYVADLITVINKLIH 200
>gi|347539031|ref|YP_004846456.1| dTDP-4-dehydrorhamnose reductase [Pseudogulbenkiania sp. NH8B]
gi|345642209|dbj|BAK76042.1| dTDP-4-dehydrorhamnose reductase [Pseudogulbenkiania sp. NH8B]
Length = 297
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 133/322 (41%), Gaps = 65/322 (20%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
R+L+ GG+G LG L + L+ + GK + P ++L DL
Sbjct: 2 RILLTGGSGQLGFELRRSLA-LYGKLW--------APGREVL-------------DLSRP 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
L+F PD++VN AA + E +P A +N + L+ E L+
Sbjct: 40 DQLAPPVLEFA-PDLIVNAAAYTAVDRAETEPALAERVNAEAPAE--LARLAERLGATLL 96
Query: 125 HLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
H STD V++G + Y+E D P++VYG++K E + CS +LR+S +YG
Sbjct: 97 HFSTDYVFDGAGVAPYREGDVTRPLSVYGRTKRDGELAVMNDCSRHYVLRTSWVYG---- 152
Query: 184 SPVPKSLPIQWIDSVL---SKGEKVEFFHDECRCPVYVRDVVKIILALTNR--------- 231
S+ ++ ++L ++ + + HD+ P + + L +R
Sbjct: 153 -----SVGGNFVKTILRLAAQRDTLNVVHDQVGAPTSAMLIADVSAQLVSRLREGRVLPY 207
Query: 232 ------------WLSEDKQM-QLLLNVGG-----PDRVSRVQMAEVDRGVQSPADISMDI 273
W +++ L +VGG P+ + + A+ + PA+ +D
Sbjct: 208 GLYHLAAAGETSWHGFAREIVGLAQDVGGGLVLKPEAIQAIPAADYPAAAERPANSRLDT 267
Query: 274 TKLVQTLNIDPVTYKDGVKLTL 295
KL L I ++ ++L L
Sbjct: 268 HKLRVALGIVLPDWRHHLQLVL 289
>gi|300313656|ref|YP_003777748.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum seropedicae SmR1]
gi|300076441|gb|ADJ65840.1| dTDP-4-dehydrorhamnose reductase protein [Herbaspirillum
seropedicae SmR1]
Length = 312
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 72 LKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQV 131
L+ +P ++VN AA + E+D A ++N + ++ L+ + L+H STD V
Sbjct: 46 LQQARPGLIVNAAAYTAVDKAESDVARAEAVNALAPMI--LAQQAQMLGAPLVHFSTDYV 103
Query: 132 YEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++G + Y E D P+NVYG++K+A E+ I C + ILR+S +YG
Sbjct: 104 FDGKSARPYVETDPTGPLNVYGRTKLAGEQGIAAHCDAYWILRTSWVYG 152
>gi|297526884|ref|YP_003668908.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM
12710]
gi|297255800|gb|ADI32009.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM
12710]
Length = 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RV V+G +G LG ++ L + DA+P DVD+
Sbjct: 2 RVAVIGASGQLGSDIVFVLGD----------------------DAIP--LTHQDVDVTDA 37
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S D + + +PDV+VN AA CE +P ++N +L ++ + + I
Sbjct: 38 SSLDVI--RDLKPDVIVNTAAYHKVDECELNPLKTFNVNSVGALN--VAKIANEVDAINI 93
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V++G K Y E+D+ PVNVYG SK E + I+R + ++G +
Sbjct: 94 YISTDFVFDGKKGRPYNEDDQPNPVNVYGLSKYIGEIVTRNYSRKYYIIRLASLFGVKG- 152
Query: 184 SPVPKSLPIQWIDSVLSK---GEKVEFFHDECRCPVYVRDVVKIILAL 228
+ +ID + K GE + D P Y +DV +++ L
Sbjct: 153 ---ARGKGGNFIDKITEKARRGEPIRVVDDMIMSPTYTKDVARMLKKL 197
>gi|383640071|ref|ZP_09952477.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas elodea ATCC 31461]
gi|32170825|gb|AAP57701.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas elodea ATCC
31461]
Length = 288
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 36 THHSTPLPQLLLD-ALPHSFVFF---DVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRV 91
T H + Q L + A H +F + DL +A K QP+++V+ AA +
Sbjct: 6 TGHDGQVAQSLGEQAQGHELIFTSYPEFDLSRPETIEAAVAKI-QPELIVSAAAYTAVDK 64
Query: 92 CENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEG-VKSFYKEEDEIAPVNV 150
E++P+ AM+IN V L+ +I LSTD V++G + ++E+D P+ V
Sbjct: 65 SESEPELAMAINGDGPGV--LARAGAKIGAPIIQLSTDYVFDGSLDRPWREDDPTGPLGV 122
Query: 151 YGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHD 210
YG +K+A E+ + + A++R + +Y P + V L + L+ D
Sbjct: 123 YGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALN------VVED 176
Query: 211 ECRCPVYVRDVVKIILALTNRW 232
+ CP D+ ILA+ RW
Sbjct: 177 QQGCPSSALDIASAILAVVERW 198
>gi|307609553|emb|CBW99053.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila 130b]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++LV G G +G +++ S E + Y A T D+
Sbjct: 2 KILVTGANGQVGTEIIKRFSSSEHEVY--ACTR----------------------DILDC 37
Query: 65 SGFDAV--ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
S + V L +PD+++N AA + E++PD A +N + V L ++ K
Sbjct: 38 SKLERVHDVLSEIKPDLIINAAAYTAVDKAEDEPDLAHIVN--AEFVCRLVNYCTLKNVP 95
Query: 123 LIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQ 181
LIHLSTD V++G K Y E D PV+ YG++K E+ I + + ILR S ++G Q
Sbjct: 96 LIHLSTDYVFDGEKEGAYHETDIPHPVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQ 155
Query: 182 TISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNR 231
+ V L ++ S +++ D+ P RD+ +++ + +
Sbjct: 156 GKNFVKTIL------NLASSRKELNIVSDQSGRPTSARDIARVLFEIVQK 199
>gi|387129714|ref|YP_006292604.1| dTDP-4-dehydrorhamnose reductase [Methylophaga sp. JAM7]
gi|386271003|gb|AFJ01917.1| dTDP-4-dehydrorhamnose reductase [Methylophaga sp. JAM7]
Length = 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+VL++G +G LG L + LS L+ D H +DL +
Sbjct: 2 KVLLLGASGQLGWQLQRSLS--------------------LVADC--HFLTRAQLDLANS 39
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
++ LK QPD VVN AA + E++P A IN + V ++ L+
Sbjct: 40 QAIQSL-LKQLQPDWVVNAAAYTAVDKAESEPALATQINALAPAV--MAETLAKNGGRLL 96
Query: 125 HLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
H STD V+ G + ++E D AP+N YG SK+A E+ I ILR+ +YG
Sbjct: 97 HFSTDYVFNGQGATPWRETDPTAPLNQYGASKLAGEQAITASQCQHLILRTGWVYG 152
>gi|229056956|ref|ZP_04196351.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603]
gi|228720345|gb|EEL71919.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603]
Length = 284
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 3 KKRVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLK 62
K+R+++ G G LG+ L + E+ + YD+ P + LLD S +
Sbjct: 2 KERIIITGANGQLGKQLQE---ELNSEEYDI------YPFDKKLLDVTNISRI------- 45
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSIN-VPSSLVNWLSSFTENKEN 121
++ +P +V+CAA + E + D A IN + + V S K
Sbjct: 46 ------KQVVQEIKPHTIVHCAAYTKVDGAEKEQDLAYLINAIGARNVAVASQLIGAK-- 97
Query: 122 LLIHLSTDQVYEGVK-SFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
L+++STD V+ G K Y E AP+N+YG SK A E+F+ E + + I+R+S +YG
Sbjct: 98 -LVYVSTDYVFPGDKPDGYHEFHNPAPINIYGASKFAGEQFVKELHNKYFIVRTSWLYGK 156
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ V L + + E + D+ P YV D++ +I L
Sbjct: 157 YGNNFVKTMLRLG------KERENISVVADQVGSPTYVADLITVINKL 198
>gi|307730301|ref|YP_003907525.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003]
gi|307584836|gb|ADN58234.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003]
Length = 307
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKP-YDVAATHHSTPLPQLLLDALPHSFVFFDV-DLK 62
+V V+G +G LG+ ++ +E+ +P + V T + P P V DV D +
Sbjct: 3 KVAVIGASGLLGRAVM---NELAKQPAWQVVGTAFTRPAPNT---------VALDVRDSR 50
Query: 63 SGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL 122
+ F ++ PD +V AA P VCE P+ A ++NV + ++ L
Sbjct: 51 AVEKF----VEREAPDALVVAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTL 106
Query: 123 LIHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP-- 180
I STD V++G + Y+ + E AP+N YG+SK+ E+ + +LR ++YGP
Sbjct: 107 SI--STDYVFDGSRPPYRPDAEPAPLNAYGRSKLEGERALTGATDFGCVLRLPLLYGPIV 164
Query: 181 -QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQM 239
S V +P SV ++G+ R P + DV +I + R + E +
Sbjct: 165 DWAESAVTSLVPAI-AASVGAQGKAAHMDAWAIRYPSFTPDVAFVIRQMLERHV-EGNAI 222
Query: 240 QLLLNVGGPDRVSRVQMAEVDRGVQSPADISMDITKLVQTLNID 283
+ +++ G + +++ ++A +L + LN+D
Sbjct: 223 RGIVHWSGDEPMTKYEIA----------------MRLAEALNLD 250
>gi|56965450|ref|YP_177182.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16]
gi|56911694|dbj|BAD66221.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16]
Length = 281
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
RVL+ G G LG L+ S+ Y V L + LD V
Sbjct: 4 RVLITGAGGQLGHDLV---SQFSLNGYQVFG------LTRQDLDITDQDMV--------K 46
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
S F+ V +PD+VV+ AA + E+D D A +N + + + N + ++
Sbjct: 47 SVFEKV-----KPDLVVHAAAYTAVDQAESDVDDAFRVNAIGTRNVAVEANRYNAK--VV 99
Query: 125 HLSTDQVYEG-VKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTI 183
++STD V+ G + E +AP+ +YG+SK+A E +I + C+ F I+R+S +YG
Sbjct: 100 YISTDYVFNGQAREPINEFSPVAPIGIYGQSKLAGENYIRDLCNQFFIVRTSWVYG---- 155
Query: 184 SPVPKSLPIQWIDSVLSKG---EKVEFFHDECRCPVYVRDVVKIILAL 228
SL ++ ++L G E++ D+ P Y D+ K I+ +
Sbjct: 156 -----SLGNNFVKTMLKLGQEKEEIGVVADQIGSPTYTVDLAKSIVEI 198
>gi|419797521|ref|ZP_14322994.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca VK64]
gi|385697958|gb|EIG28358.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca VK64]
Length = 288
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 19/195 (9%)
Query: 42 LPQLLLDALPHSFVFFDVDLKSGSGFDAVALKFG----QPDVVVNCAALSVPRVCENDPD 97
L + D LP ++ D S D A++ QPD +VN AA + E
Sbjct: 12 LARCFRDRLPENWELIATDSTSLDITDTEAVRNMVQNFQPDAIVNAAAFTAVDKAEAHVG 71
Query: 98 SAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKV 156
+A ++N ++ V+ L+S + IH+STD V++G K+ YKE+D P +VYG++KV
Sbjct: 72 TAFAVN--ATAVHNLASAARACQARFIHISTDYVFDGTNKTPYKEQDYTNPQSVYGRTKV 129
Query: 157 AAEKFIYEKCSNFAILRSSII---YGPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECR 213
+ E + I+R+S + YG + + + + + + + HD+
Sbjct: 130 SGELLALAANPDSVIIRTSWLFSEYGNNFVKTMIR---------LAGERDNLSIVHDQTG 180
Query: 214 CPVYVRDVVKIILAL 228
P Y D+ + I+AL
Sbjct: 181 SPTYAGDLAQAIIAL 195
>gi|336364523|gb|EGN92880.1| hypothetical protein SERLA73DRAFT_116738 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388566|gb|EGO29710.1| hypothetical protein SERLADRAFT_365722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQL-LLDALPHSFVFFDVDLKS 63
RV+V G +G LG + + + +A + + L +L LLD F +
Sbjct: 2 RVVVTGASGVLGSAVYNAFQQRNHQVLGLAYSRPTGTLKKLDLLDEGETRQTFTNF---- 57
Query: 64 GSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLL 123
PD V++CAA P V E DPD A +N +S+ L+ ++ L
Sbjct: 58 ------------SPDWVIHCAAERRPDVAEKDPDGARKLN--ASVPAHLAELSKELHFTL 103
Query: 124 IHLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYE-KCSNFAILRSSIIYGPQT 182
I++STD V++G Y + P+ +YG+SK+ E I + +LR ++YGP
Sbjct: 104 IYISTDYVFDGTSPPYTPSSKTNPLQLYGESKLGGEVAILGVDGAQAVVLRVPVLYGP-- 161
Query: 183 ISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKIILALTN 230
+P I + V+ G++ + H R P V D+ ++ L+
Sbjct: 162 -APKNSDSAINVLLDVVQDQSGKQYQMDHYATRYPTNVVDIASFLVRLSG 210
>gi|221311746|ref|ZP_03593593.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316072|ref|ZP_03597877.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320983|ref|ZP_03602277.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325268|ref|ZP_03606562.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767795|ref|NP_391661.3| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis
str. 168]
gi|402777945|ref|YP_006631889.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis QB928]
gi|452912337|ref|ZP_21960965.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis MB73/2]
gi|254763400|sp|P39631.3|SPSK_BACSU RecName: Full=Spore coat polysaccharide biosynthesis protein SpsK
gi|225185423|emb|CAB15808.3| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402483124|gb|AFQ59633.1| Putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis QB928]
gi|407962624|dbj|BAM55864.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BEST7613]
gi|407966637|dbj|BAM59876.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BEST7003]
gi|452117365|gb|EME07759.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis MB73/2]
Length = 283
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG L + L + Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAGGQLGLELCRQLKQ---AGYEVIA------LTKKMMNIADQRSVRHSFGHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD+VVN AA + CE + D A IN + L S
Sbjct: 52 ----------------QPDIVVNSAAFTSVDQCEKELDKAYLINGIGAYYTALESTRIGA 95
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +H+STD V+ G + Y+E+D + P +YGKSK E+ I + I+R+S +Y
Sbjct: 96 Q--YVHISTDYVFNGKGTQPYREDDPLDPKTIYGKSKRLGEELIRLTTKDSTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G + V L + +++ D+ P Y +D+ + ++ L
Sbjct: 154 GHGGSNFVETMLKLA------ETKQELRVVSDQIGSPTYTKDLAEAVIKL 197
>gi|213962406|ref|ZP_03390669.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno]
gi|213955072|gb|EEB66391.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno]
Length = 278
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 6 VLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSGS 65
VLV G G LG SEI+ + ++ ++ F D D S
Sbjct: 3 VLVTGANGQLG-------SEIQNNTHRIS------------------NYYFSDAD--SLD 35
Query: 66 GFDAVALK-FGQP---DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKEN 121
DA A++ F Q D++VNCAA + E+D +A +IN + V L+S + +
Sbjct: 36 ITDAQAIRAFVQQHAIDLIVNCAAYTNVDKAEDDCATAQAIN--HTAVAHLASVCKEFQL 93
Query: 122 LLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGP 180
LIH+STD V+ G K+ Y+E D P+ VYG++K+A E+ I I+R+S +Y
Sbjct: 94 PLIHISTDYVFGGTKNTPYRETDATQPLGVYGRTKLAGEQAIQNSGIEHLIIRTSWLYSL 153
Query: 181 QTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIIL-ALTNRWLSEDKQM 239
+ + K+ I + S+ +++ D+ P D+ I+ A+ N W +++
Sbjct: 154 RFGNNFVKT-----IQRLSSERPQLKVVADQVGTPTNAADLANFIVQAIENAWYRGKREV 208
Query: 240 QLLLNVG 246
N G
Sbjct: 209 YHFSNEG 215
>gi|331668737|ref|ZP_08369585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271]
gi|331063931|gb|EGI35842.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A IN S V ++ IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQLINATS--VEAIAKAANEVGAWAIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|335034902|ref|ZP_08528246.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. ATCC 31749]
gi|333793756|gb|EGL65109.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. ATCC 31749]
Length = 297
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 71 ALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL--LIHLST 128
AL+ +PDVVV+ AA + E++ + A ++N + ++ KE +IHLST
Sbjct: 45 ALRDAKPDVVVSAAAYTAVDKAESESELAFAVNRDGAG----AAAQAAKELCVPIIHLST 100
Query: 129 DQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVP 187
D V++G K+ Y E D + P +VYG SK+ EK + E N AILR++ +Y
Sbjct: 101 DYVFDGAKATPYIETDPVGPTSVYGLSKLEGEKAVAENTPNHAILRTAWVYS-------- 152
Query: 188 KSLPIQWIDSVLSKGE---KVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQL 241
++ ++L GE ++ D+ CP D+ I+ + R LS + +L
Sbjct: 153 -EYGNNFVKTMLRLGESRDEINVVADQLGCPTSANDIAVAIIEIARR-LSNNPSARL 207
>gi|168212615|ref|ZP_02638240.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str.
F4969]
gi|170715772|gb|EDT27954.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str.
F4969]
Length = 295
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
++L+ G G LG L + + + V+ ++ + L +D L D+ S
Sbjct: 2 KILITGSNGQLGNELQSIIKSGKAEIGSVSENTKNSEVIALDVDKL---------DITSL 52
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
V L +PDVV+NCAA + CE++ D A +N S L+ E L+
Sbjct: 53 ENVKNV-LNEEKPDVVINCAAATNVDGCESNEDFAFKVN--SLGARNLAMVCEEIGAKLV 109
Query: 125 HLSTDQVYEGV-KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
+STD V+ GV + E D AP +VYGK+K+ E ++ E CS + I+R++ +YG
Sbjct: 110 QVSTDYVFSGVGEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYG 165
>gi|402849979|ref|ZP_10898196.1| dTDP-4-dehydrorhamnose reductase [Rhodovulum sp. PH10]
gi|402499730|gb|EJW11425.1| dTDP-4-dehydrorhamnose reductase [Rhodovulum sp. PH10]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 78 DVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGVKS 137
D V+ AA + E + + A +IN + V L+ T L+H+STD V++G K
Sbjct: 62 DAVICAAAYTAVDQAEREKNLAFAINAEAPRV--LAEATARTGTPLVHVSTDYVFDGSKG 119
Query: 138 F-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLPIQWID 196
Y+ +D +AP+ VYG SK A E+ + E AI+R+S +Y SP K+ ++ +
Sbjct: 120 APYRSDDPVAPLGVYGASKEAGERAVRENNPRHAIVRTSWLY-----SPFGKNF-LKTML 173
Query: 197 SVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
+ ++ EK+ D+ CP D+ + L +
Sbjct: 174 RLGAEREKLTVVDDQRGCPTAAADLARACLVI 205
>gi|398305261|ref|ZP_10508847.1| dTDP-4-dehydrorhamnose reductase [Bacillus vallismortis DV1-F-3]
Length = 283
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLD-----ALPHSFVFFDV 59
+VLV G G LG+ L + L + Y+V A L + +++ ++ HSF +
Sbjct: 3 KVLVTGAGGQLGRELCRQLKQT---GYEVIA------LTKKMMNIADQRSVRHSFDHY-- 51
Query: 60 DLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENK 119
QPD+VVN AA + CE + D A IN + L +
Sbjct: 52 ----------------QPDIVVNTAAFTSVDKCETELDKAYLINGIGAYYTALEATRIGA 95
Query: 120 ENLLIHLSTDQVYEGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIY 178
+ +H+STD V++G + Y+E+D + P +YGKSK E+ I + I+R+S +Y
Sbjct: 96 Q--YVHISTDYVFDGKGTQPYREDDPLDPNTIYGKSKKLGEELIRLATKDSTIIRTSWVY 153
Query: 179 GPQTISPVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILAL 228
G + V L + +++ D+ P + +D+ + ++ L
Sbjct: 154 GHGGSNFVETMLKLA------ETKQELRVVSDQIGSPTFTKDLAEAVITL 197
>gi|389686276|ref|ZP_10177597.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis O6]
gi|388549737|gb|EIM13009.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas chlororaphis O6]
Length = 289
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENL---LIHLSTDQVY 132
+P +++N AA + E++P+ A +IN + V F E L LIH STD V+
Sbjct: 50 RPQLIINAAAHTAVDQAESEPELAFAINASAPGV-----FAEEARKLGIPLIHYSTDYVF 104
Query: 133 EGVKSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTISPVPKSLP 191
+G K Y E+DE P++VYG+SK+A E+ I S ILR+S +Y S K+
Sbjct: 105 DGSKQAPYTEDDEPNPLSVYGQSKLAGERAIDAAGSEHLILRTSWVY-----SNTGKNFL 159
Query: 192 IQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRW 232
+ + +L + + D+ P + + AL RW
Sbjct: 160 LT-MQRLLQEKPHLRVVADQIGAPTWASTIAASTAALIERW 199
>gi|432481374|ref|ZP_19723332.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE210]
gi|431008031|gb|ELD22842.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli KTE210]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQVLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|336269791|ref|XP_003349656.1| hypothetical protein SMAC_03246 [Sordaria macrospora k-hell]
gi|380093269|emb|CCC08927.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 337
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 36/279 (12%)
Query: 4 KRVLVVGGTGYLGQHLLQG---------LSEIEGKPYDVAATHHSTPLPQLLLDALPHSF 54
K LV G TG LG+ +++ LS G ++V T S
Sbjct: 9 KTALVTGATGLLGRQVVKAFQGLSVPTELSSNAGWTWEVKGTGFSRA----------DGV 58
Query: 55 VFFDVDLKSGSGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSS 114
VDL+ + + L+ P V+V+CAA P + DP+ +NV ++ L+
Sbjct: 59 NVLKVDLEKAEEVERI-LEDVNPQVLVHCAANRFPDKVDADPEGTRLLNVEATRT--LAK 115
Query: 115 FTENKENLLIHLSTDQVYEGV--KSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFA-- 170
++ LLI++STD V+ G ++ Y+ + P N+YG +K+ EK + E+ S
Sbjct: 116 ACASRGILLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVMEEFSKAGKE 175
Query: 171 ----ILRSSIIYGPQTISPVPKSLPIQWIDSVL--SKGEKVEFFHDECRCPVYVRDVVKI 224
++R ++YG +S +D+V +G+KV+ H R P DV ++
Sbjct: 176 GLGVVMRVPVLYGKTEEGRNEESAVNVLLDAVFKAQEGKKVKMDHWALRFPTNTEDVGRV 235
Query: 225 ILALTNRWLS----EDKQMQLLLNVGGPDRVSRVQMAEV 259
+ ++LS E + +L + ++ ++ +M ++
Sbjct: 236 ARDVAVKYLSTSGAERSSLPRILQMSSEEQYTKYEMCQL 274
>gi|203285009|gb|ACH97128.1| RmlD [Escherichia coli]
Length = 299
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 76 QPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLIHLSTDQVYEGV 135
+PD++VN AA + E++P+ A +N S V ++ +IH STD V+ G
Sbjct: 54 RPDIIVNAAAHTAVDKAESEPEFAQLLNATS--VEAIAKAANEVGAWVIHYSTDYVFPGT 111
Query: 136 KSF-YKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYG 179
++E D AP+NVYG++K+A EK + E C+ I R+S +Y
Sbjct: 112 GEIPWQEADATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYA 156
>gi|126441423|ref|YP_001060256.1| NAD-dependent epimerase/dehydratase [Burkholderia pseudomallei 668]
gi|126220916|gb|ABN84422.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 668]
Length = 280
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 32/262 (12%)
Query: 5 RVLVVGGTGYLGQHLLQGLSEIEGKPYDVAATHHSTPLPQLLLDALPHSFVFFDVDLKSG 64
+V +VG TGY+G+ L S+ + T + A +F + V
Sbjct: 2 KVFLVGSTGYIGKTLFDACSQ----RWRTLGTSTRDGADIVFSLARAEAFPYEQVS---- 53
Query: 65 SGFDAVALKFGQPDVVVNCAALSVPRVCENDPDSAMSINVPSSLVNWLSSFTENKENLLI 124
DVV AA+S P C D ++A +NV +L L + +I
Sbjct: 54 -----------AGDVVAVAAAISSPDACAKDYETAFQVNVTGTLT--LIRGVVARGARVI 100
Query: 125 HLSTDQVYEGVKSFYKEEDEIAPVNVYGKSKVAAEKFIYEKCSNFAILRSSIIYGPQTIS 184
S+D VY + EE E+ P YG K E + E + ++R S ++
Sbjct: 101 FFSSDTVYGASEQLLSEEAELTPAGAYGAMKRRVEAELGENAA-VKVIRLSYVFSL---- 155
Query: 185 PVPKSLPIQWIDSVLSKGEKVEFFHDECRCPVYVRDVVKIILALTNRWLSEDKQMQLLLN 244
+ Q++ +G++ + F RC VY+ DVV+ +++L RW + D+++ +N
Sbjct: 156 ---RDRFTQYLLGCAKEGKRADIFKPFSRCVVYLSDVVEGVVSLIERWDAIDERV---IN 209
Query: 245 VGGPDRVSRVQMAEVDRGVQSP 266
GP+ V+R E R + +P
Sbjct: 210 FVGPELVAREDFVEKIRNLAAP 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,748,688,511
Number of Sequences: 23463169
Number of extensions: 198702248
Number of successful extensions: 541311
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 11021
Number of HSP's that attempted gapping in prelim test: 529153
Number of HSP's gapped (non-prelim): 13284
length of query: 300
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 159
effective length of database: 9,050,888,538
effective search space: 1439091277542
effective search space used: 1439091277542
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)