BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022282
(300 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium
discoideum GN=DDB_G0284757 PE=4 SV=2
Length = 766
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 195 IPSPDEEISDHQRMLDRLQLYDLVENK-VQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVN 253
+P E QR+ +RL+LY L +K + GDGNCQ +LSDQLY H VR+ +V+
Sbjct: 608 LPQSKEVQIAQQRLNERLELYMLKNSKEIPGDGNCQMHALSDQLYGDLSHSQEVRKTIVD 667
Query: 254 QLKAHPE--------IYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAAD 294
L+ + + I + + DY M+K+G WGDH+TL AAA+
Sbjct: 668 WLRKNKDFQLPNGATICQFVNTNNWDDYCNDMSKNGNWGDHLTLLAAAE 716
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 23/145 (15%)
Query: 169 SVIDGELGKRLNQMVPVPHIPKINGDIPSPDEEISDHQRMLDRLQLYDLVENK------V 222
SV+D +L ++ + P+P + + D PS E+ ++ L L ++K V
Sbjct: 540 SVVDPQLSRK--TLKPLPSL--VVTDQPSKQPELPKYKGRTPYTDLEQLAQSKGYTVKQV 595
Query: 223 QGDGNCQFRSL--SDQLYRSPEH-HMFVRQQVVNQLKAHPEIYEGYVPM----------A 269
GDGNC FRS+ S + R + H +RQ VV+ L+ +PE + Y+ +
Sbjct: 596 SGDGNCLFRSVCKSIRALRGEKFTHRQLRQMVVDYLRENPEFLQVYLEYVARQRDNSLPS 655
Query: 270 YSDYLKKMNKSGEWGDHVTLQAAAD 294
YL +M+K G WGD + L+ ++
Sbjct: 656 TEQYLSEMSKCGTWGDLICLKTLSE 680
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 198 PDEEISDHQRMLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA 257
P E+ + L +L LY + V DG+C FR++++Q+ S H+ VR ++ L+
Sbjct: 18 PREDATPMDAYLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRE 74
Query: 258 HPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQA 291
+ E +E ++ ++ +YLK++ EW V + A
Sbjct: 75 NREKFEAFIEGSFEEYLKRLENPQEWVGQVEISA 108
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 19/104 (18%)
Query: 208 MLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPE---HHMFVRQQVVNQLKAHPEIYEG 264
+L R + Y ++ V+GDGNC FR++ L + H +R QVV L +H E E
Sbjct: 599 ILARRRGYKVIP--VKGDGNCLFRAVGKSLRLNQNIKYSHEDLRAQVVTYLTSHKEFLEP 656
Query: 265 YV----------PMAYSD----YLKKMNKSGEWGDHVTLQAAAD 294
Y+ P Y+ Y+K ++K G WGD + L+ ++
Sbjct: 657 YLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSE 700
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 209 LDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPM 268
L +L LY + V DG+C FR++++Q+ S H+ VR + L+ + E +E ++
Sbjct: 29 LRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKFEAFIEG 85
Query: 269 AYSDYLKKMNKSGEWGDHVTLQA 291
++ +YLK++ EW V + A
Sbjct: 86 SFEEYLKRLENPQEWVGQVEISA 108
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
L V D +C FR++S+QL+ S HH+ +R+ V+ +K + + +E YV ++ YL++
Sbjct: 225 LFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMKENQQAFESYVEGSFEKYLER 284
Query: 277 MNKSGEWGDHVTLQA 291
+ E + L+A
Sbjct: 285 LGDPKESAGQLELKA 299
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
V K++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 211 FVIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 270
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 271 KRKNNCHGNHIEMQAMAE 288
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 198 PDEEISDHQRMLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA 257
P E+ + L +L LY + V DG+C FR++++Q+ S H+ VR ++ L+
Sbjct: 18 PREDATPMDAYLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHCLRE 74
Query: 258 HPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQA 291
+ E +E + ++ YLK++ EW + + A
Sbjct: 75 NREKFEAIIGGSFEGYLKRLENPQEWVGQMEISA 108
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 199 DEEISDHQRMLDRLQLYD---LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQL 255
D + ++ Q + L D + +++ DG C FR+++DQ+Y + H VR+ ++ L
Sbjct: 145 DPDTAEQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYL 204
Query: 256 KAHPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAAD 294
+ + + YV ++ Y+ + K+ G+H+ +QA A+
Sbjct: 205 MKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAE 243
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 273 KRKNNCHGNHIEMQAMAE 290
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 273 KRKNNCHGNHIEMQAMAE 290
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 273 KRKNNCHGNHIEMQAMAE 290
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 231 KRKNNCHGNHIEMQAMAE 248
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 277 MNKSGEWGDHVTLQAAAD 294
K+ G+H+ +QA A+
Sbjct: 231 KRKNNCHGNHIEMQAMAE 248
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 209 LDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPM 268
L L L+ + K D +C FR++S+QL+ S HH+ +R+ V+ ++ + + +E YV
Sbjct: 226 LGSLGLFRKLTAK---DASCLFRAISEQLFCSQVHHLEIRKACVSYMRENQQTFESYVEG 282
Query: 269 AYSDYLKKMNKSGEWGDHVTLQA 291
++ YL+++ E + ++A
Sbjct: 283 SFEKYLERLGDPKESAGQLEIRA 305
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 208 MLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVP 267
++LQ L +V GDGNC FR+L DQL +H+ RQ+ V+ + E +E +V
Sbjct: 56 FANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVE 115
Query: 268 --MAYSDYLKKMNKSGEWGDHVTLQAAA 293
+ + ++ + K G + + + A A
Sbjct: 116 DDIPFEKHVASLAKPGTFAGNDAIVAFA 143
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA-----HPEIYEGYV----- 266
LV + DGNC F S+S QL + H++ + Q + A H E +EG++
Sbjct: 185 LVAVDIPADGNCLFASISHQL--NYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEES 242
Query: 267 --PMAYSDYLKKMNKSGEWGDHVTLQAAADSV 296
+ SDY ++ + +WG + +QA A+S+
Sbjct: 243 GEVLPVSDYCNEIRNNSKWGSDIEIQALANSL 274
>sp|Q9LK39|AAE16_ARATH Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis
thaliana GN=AAE16 PE=2 SV=1
Length = 722
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 30 SGSQNVITRYDRDSSQVGYVRECYSETELAYVENDEVIAHVLQEEFSQVAAAEASGSINP 89
+G+ NV+ R R S + C+SE+ V+N E + E FS AA + +
Sbjct: 158 TGAVNVV-RGSRSSVEELLQIYCHSESVALVVDNPEFFNRI-AESFSYKAAPKFVILLWG 215
Query: 90 EKSSILEQDRVSPLGIYN--NSVCENDRSA---ADGSGKNEEEMDDSGRMVEADYQSKGE 144
EKSS++ R +P+ YN + R+ ++ SGK E E D + Y S G
Sbjct: 216 EKSSLVTAGRHTPVYSYNEIKKFGQERRAKFARSNDSGKYEYEYIDPDDIATIMYTS-GT 274
Query: 145 KVELEYDEDNMEDLLHQLDTTDESSVIDGELGKRLNQMVPVPH 187
+ ++LLHQ+ + S + E G+R M+P H
Sbjct: 275 TGNPKGVMLTHQNLLHQIR--NLSDFVPAEAGERFLSMLPSWH 315
>sp|A6UF86|EX7L_SINMW Exodeoxyribonuclease 7 large subunit OS=Sinorhizobium medicae
(strain WSM419) GN=xseA PE=3 SV=1
Length = 526
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 184 PVPHIPKINGDIPSPDEEISDH--QRMLDRLQLYDLV-ENKVQGDGNCQ 229
P+P +PK+ G + SP + R+ DR ++ LV +VQGDG C+
Sbjct: 141 PLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVLVWPVRVQGDGACE 189
>sp|P53037|PSD2_YEAST Phosphatidylserine decarboxylase proenzyme 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PSD2 PE=1
SV=1
Length = 1138
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 44/216 (20%)
Query: 53 YSETELAYVENDEVIAHVLQEEFSQVAAAEASGSINPEKSSILEQDRVSPLGIYNNSVCE 112
YS+T+LA+ E + EE + +SGSI E+ ++ D +
Sbjct: 300 YSDTDLAHDEEVNAEDEIDAEE--SIEDMNSSGSICTERRYDIDNDTIFD---------- 347
Query: 113 NDRSAADGSGKNEEEMDDSGRMVEADYQSKGEKVELEYDEDNMEDLLHQLDTTDESSVID 172
S ++ N+EE+D EAD+ + + + DED L + DE +++
Sbjct: 348 ---SISEVVSLNDEELDILNDFEEADHPNVPDINVHDIDEDTRISLSSMITALDEYDIVE 404
Query: 173 GELGKRLNQMVPVPHIPKIN-GDIPSPDEEISDHQRMLDRLQLYDLVENKVQGDGNCQF- 230
E V +P ++ DI S D+E S++Q+ D + +D+ + D + Q
Sbjct: 405 PE---------DVAKLPAVSENDITSVDDEESENQQESD--EEFDIYNEDEREDSDFQSK 453
Query: 231 ----------------RSLSDQLYRSPEHHMFVRQQ 250
+S ++ LYR + + F+ ++
Sbjct: 454 EYIGSRLLHLQRGKHNKSYANYLYRRAKSNFFISKK 489
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
L D + FR +++Q+Y + H +R + V + I+E +P + Y++
Sbjct: 29 LYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSYMQD 88
Query: 277 MNKSGEWGDHVTLQAAA 293
M+K +G L+A +
Sbjct: 89 MSKPKTYGTMTELRAMS 105
>sp|A1JKW9|MDTC_YERE8 Multidrug resistance protein MdtC OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=mdtC PE=3
SV=1
Length = 1024
Score = 33.9 bits (76), Expect = 1.5, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 135 VEADYQSKGEKVELEYDEDNMEDLLHQLDTTDESSVIDGELGKR--------LNQMVPVP 186
V +D Q KG ++ L YD + M L +D +D +++++ G+R LNQ V
Sbjct: 693 VNSDQQDKGSEMALTYDRETMARL--GIDVSDANALLNNAFGQRQISTIYQPLNQYKVVM 750
Query: 187 HI-PKINGDIPSPDE 200
+ P+ D+ S D+
Sbjct: 751 EVAPQYTQDVSSLDK 765
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 199 DEEISDHQRMLDRLQLYDLVENKVQ----GDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQ 254
DE+++ + ++R Y NK + DGNC +R++S +Y H +R+Q V+
Sbjct: 260 DEKLALYLAEVERQDKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHY 319
Query: 255 LKAHPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQA 291
+ H + + + +++ + G W + L A
Sbjct: 320 IADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLA 356
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 225 DGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKKMNKSGEWG 284
DGNC +R++S +Y H +R+Q V+ + H + + + +++ + G W
Sbjct: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
Query: 285 DHVTLQA 291
+ L A
Sbjct: 377 GYPELLA 383
>sp|P54083|SBPA_AZOBR Multiple sugar-binding periplasmic protein SbpA OS=Azospirillum
brasilense GN=sbpA PE=1 SV=1
Length = 357
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 128 MDDSGRMVEADYQSKGEKVELEYDEDNMEDLLHQLDT 164
+DD MV+ +Q+KG K +L+Y ED++ + L Q++T
Sbjct: 47 IDDGNNMVK-QFQAKGYKTDLQYAEDDIPNQLAQIET 82
>sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3
Length = 1045
Score = 31.6 bits (70), Expect = 8.1, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 158 LLHQLDTTDESS-VIDGELGKRLNQMVPVPHIPKINGDIPSPDEEISDHQRMLDRLQLYD 216
LL L+ D SS E+ LN + P + +N D+ I + L +LQ+ D
Sbjct: 548 LLTNLEYLDLSSNRFSSEIPPTLNNL---PRLYYMNLSRNDLDQTIPEGLTKLSQLQMLD 604
Query: 217 LVENKVQGDGNCQFRSLSD 235
L N++ G+ + QFRSL +
Sbjct: 605 LSYNQLDGEISSQFRSLQN 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,533,469
Number of Sequences: 539616
Number of extensions: 5099363
Number of successful extensions: 14587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 14480
Number of HSP's gapped (non-prelim): 157
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)