Query 022285
Match_columns 299
No_of_seqs 283 out of 1915
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 16:56:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022285.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022285hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 99.7 6.1E-17 2.1E-21 137.1 12.9 146 4-154 10-176 (176)
2 4gek_A TRNA (CMO5U34)-methyltr 99.2 3.5E-11 1.2E-15 109.5 11.4 93 4-98 68-181 (261)
3 1vl5_A Unknown conserved prote 99.1 1.8E-10 6E-15 102.8 8.0 120 6-125 37-187 (260)
4 3dh0_A SAM dependent methyltra 99.0 6.9E-10 2.4E-14 96.0 9.5 124 18-147 64-194 (219)
5 3dlc_A Putative S-adenosyl-L-m 99.0 9.1E-10 3.1E-14 94.4 10.1 109 18-126 68-201 (219)
6 3dtn_A Putative methyltransfer 99.0 1E-09 3.5E-14 96.0 10.1 109 17-127 69-213 (234)
7 3kkz_A Uncharacterized protein 99.0 3E-09 1E-13 95.3 11.1 122 5-126 45-194 (267)
8 1xxl_A YCGJ protein; structura 99.0 3.1E-09 1.1E-13 93.9 10.9 120 6-125 21-171 (239)
9 4hg2_A Methyltransferase type 99.0 2.6E-10 9E-15 103.6 4.0 76 18-98 63-138 (257)
10 3f4k_A Putative methyltransfer 99.0 4.6E-09 1.6E-13 93.0 11.6 122 5-126 45-194 (257)
11 3ujc_A Phosphoethanolamine N-m 98.9 9.5E-10 3.2E-14 97.4 7.1 120 6-126 55-204 (266)
12 3g5l_A Putative S-adenosylmeth 98.9 2.2E-09 7.5E-14 95.1 9.5 77 18-96 69-146 (253)
13 1nkv_A Hypothetical protein YJ 98.9 1.4E-09 4.6E-14 96.4 7.7 119 6-125 36-184 (256)
14 2km1_A Protein DRE2; yeast, an 98.9 2.8E-10 9.6E-15 94.2 2.7 106 1-124 4-114 (136)
15 2o57_A Putative sarcosine dime 98.9 1.7E-09 5.8E-14 98.2 7.7 122 5-126 81-232 (297)
16 3hnr_A Probable methyltransfer 98.9 5E-09 1.7E-13 90.6 9.8 105 17-125 68-198 (220)
17 2p7i_A Hypothetical protein; p 98.9 5.1E-09 1.7E-13 91.3 9.6 117 6-126 42-197 (250)
18 3bus_A REBM, methyltransferase 98.9 5.6E-09 1.9E-13 93.4 9.8 121 6-126 61-214 (273)
19 4fsd_A Arsenic methyltransfera 98.9 3.2E-09 1.1E-13 101.2 8.6 123 5-127 82-250 (383)
20 3h2b_A SAM-dependent methyltra 98.9 2.5E-09 8.4E-14 91.6 6.6 107 17-127 64-181 (203)
21 3l8d_A Methyltransferase; stru 98.9 3.4E-09 1.2E-13 92.8 7.7 119 6-126 53-198 (242)
22 3ocj_A Putative exported prote 98.9 4E-09 1.4E-13 96.8 8.3 110 17-127 144-290 (305)
23 2yqz_A Hypothetical protein TT 98.9 4.3E-09 1.5E-13 93.2 8.0 90 5-94 38-140 (263)
24 3vc1_A Geranyl diphosphate 2-C 98.9 4.6E-09 1.6E-13 96.7 8.4 123 5-127 116-268 (312)
25 3i9f_A Putative type 11 methyl 98.8 4.7E-09 1.6E-13 87.3 7.5 120 18-152 41-166 (170)
26 1y8c_A S-adenosylmethionine-de 98.8 8.3E-09 2.8E-13 90.1 8.9 88 7-95 38-142 (246)
27 3sm3_A SAM-dependent methyltra 98.8 8.9E-09 3E-13 89.3 8.9 123 5-127 29-206 (235)
28 3bkw_A MLL3908 protein, S-aden 98.8 3.6E-09 1.2E-13 92.6 5.7 89 6-96 43-145 (243)
29 3mgg_A Methyltransferase; NYSG 98.8 9E-09 3.1E-13 92.3 8.5 110 17-126 62-196 (276)
30 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.4E-09 8.1E-14 94.5 4.5 120 6-126 93-236 (254)
31 3ccf_A Cyclopropane-fatty-acyl 98.8 9E-09 3.1E-13 92.9 8.0 89 6-99 57-158 (279)
32 3gu3_A Methyltransferase; alph 98.8 1E-08 3.5E-13 93.1 8.3 80 17-97 48-128 (284)
33 2aot_A HMT, histamine N-methyl 98.8 5.9E-09 2E-13 95.1 6.5 103 20-124 86-217 (292)
34 3dli_A Methyltransferase; PSI- 98.8 1E-08 3.5E-13 90.4 7.1 116 5-127 40-183 (240)
35 2ex4_A Adrenal gland protein A 98.8 5.5E-09 1.9E-13 92.2 5.1 110 18-127 104-224 (241)
36 1pjz_A Thiopurine S-methyltran 98.8 3.9E-09 1.3E-13 91.6 4.0 79 16-94 44-139 (203)
37 2gs9_A Hypothetical protein TT 98.8 1.3E-08 4.3E-13 87.6 7.1 89 6-98 36-135 (211)
38 3e23_A Uncharacterized protein 98.7 1.7E-08 5.7E-13 87.0 7.3 104 18-127 67-181 (211)
39 4htf_A S-adenosylmethionine-de 98.7 1E-08 3.6E-13 92.6 6.2 110 17-126 91-230 (285)
40 2a14_A Indolethylamine N-methy 98.7 1.4E-08 5E-13 91.3 6.9 121 6-126 55-236 (263)
41 1vlm_A SAM-dependent methyltra 98.7 4.3E-08 1.5E-12 85.3 9.3 114 7-126 48-186 (219)
42 3e8s_A Putative SAM dependent 98.7 2.8E-08 9.6E-13 85.5 8.0 106 17-127 75-208 (227)
43 2p8j_A S-adenosylmethionine-de 98.7 1.3E-08 4.4E-13 87.1 5.3 79 19-97 49-130 (209)
44 3g5t_A Trans-aconitate 3-methy 98.7 2.4E-08 8.2E-13 91.1 7.3 81 15-95 60-149 (299)
45 3g2m_A PCZA361.24; SAM-depende 98.7 6.1E-08 2.1E-12 88.4 9.7 80 17-97 105-192 (299)
46 3lcc_A Putative methyl chlorid 98.7 1.9E-08 6.6E-13 88.2 5.3 110 17-127 89-206 (235)
47 3d2l_A SAM-dependent methyltra 98.6 3.6E-08 1.2E-12 86.1 7.0 88 6-94 33-136 (243)
48 2i62_A Nicotinamide N-methyltr 98.6 7.1E-08 2.4E-12 85.4 8.8 109 18-126 81-237 (265)
49 3ou2_A SAM-dependent methyltra 98.6 6.9E-08 2.3E-12 82.8 8.3 89 6-98 46-149 (218)
50 3pfg_A N-methyltransferase; N, 98.6 3.5E-08 1.2E-12 87.9 6.5 73 18-95 74-151 (263)
51 3ege_A Putative methyltransfer 98.6 1.2E-08 4.2E-13 91.4 3.0 114 6-126 34-176 (261)
52 1kpg_A CFA synthase;, cyclopro 98.6 7.3E-08 2.5E-12 87.0 8.2 118 6-126 64-226 (287)
53 3dp7_A SAM-dependent methyltra 98.6 1.3E-07 4.5E-12 89.2 10.2 108 18-127 205-341 (363)
54 3orh_A Guanidinoacetate N-meth 98.6 1.5E-08 5.3E-13 90.0 3.2 119 6-124 60-206 (236)
55 1ri5_A MRNA capping enzyme; me 98.6 1E-07 3.5E-12 85.8 8.5 93 5-97 63-176 (298)
56 3evz_A Methyltransferase; NYSG 98.6 5.3E-07 1.8E-11 78.5 12.8 113 5-123 54-201 (230)
57 2gb4_A Thiopurine S-methyltran 98.6 4.8E-08 1.6E-12 88.2 6.0 79 16-94 90-190 (252)
58 2kw5_A SLR1183 protein; struct 98.6 6.3E-08 2.2E-12 82.6 5.7 106 18-126 53-169 (202)
59 1ve3_A Hypothetical protein PH 98.5 9.7E-08 3.3E-12 82.5 6.8 91 7-97 39-144 (227)
60 2p35_A Trans-aconitate 2-methy 98.5 7.8E-08 2.7E-12 84.9 6.1 76 17-97 58-134 (259)
61 2g72_A Phenylethanolamine N-me 98.5 4.7E-08 1.6E-12 88.7 4.7 111 16-126 94-254 (289)
62 3cc8_A Putative methyltransfer 98.5 1.9E-07 6.6E-12 80.3 8.0 115 6-126 32-183 (230)
63 3hem_A Cyclopropane-fatty-acyl 98.5 2.1E-07 7.3E-12 84.8 8.7 119 5-126 71-241 (302)
64 1zx0_A Guanidinoacetate N-meth 98.5 4.2E-08 1.4E-12 86.4 3.7 106 18-123 85-205 (236)
65 4df3_A Fibrillarin-like rRNA/T 98.5 3.8E-07 1.3E-11 82.0 9.9 126 4-131 75-220 (233)
66 3i53_A O-methyltransferase; CO 98.5 2.3E-07 8E-12 85.9 8.8 106 19-127 196-320 (332)
67 2fk8_A Methoxy mycolic acid sy 98.5 1.7E-07 5.9E-12 86.0 7.8 118 6-126 90-252 (318)
68 3cgg_A SAM-dependent methyltra 98.5 4.5E-07 1.5E-11 75.8 9.6 111 6-125 46-172 (195)
69 3bxo_A N,N-dimethyltransferase 98.5 4E-07 1.4E-11 79.2 9.3 86 6-96 40-142 (239)
70 2zfu_A Nucleomethylin, cerebra 98.5 3.8E-07 1.3E-11 78.6 8.5 80 42-126 98-177 (215)
71 3ofk_A Nodulation protein S; N 98.5 1.6E-07 5.6E-12 80.9 6.0 78 18-97 75-156 (216)
72 3fpf_A Mtnas, putative unchara 98.5 1.1E-07 3.8E-12 88.5 5.2 89 4-97 120-224 (298)
73 2xvm_A Tellurite resistance pr 98.5 1.7E-07 5.7E-12 79.2 5.8 90 7-97 33-138 (199)
74 2r3s_A Uncharacterized protein 98.5 2.5E-07 8.6E-12 85.2 7.3 108 18-127 191-322 (335)
75 2pxx_A Uncharacterized protein 98.4 2.3E-07 7.8E-12 79.2 6.2 93 5-98 41-162 (215)
76 3gwz_A MMCR; methyltransferase 98.4 5.4E-07 1.8E-11 85.2 9.2 106 19-127 229-355 (369)
77 2vdw_A Vaccinia virus capping 98.4 1.4E-07 4.9E-12 87.3 4.6 80 18-97 73-171 (302)
78 3e05_A Precorrin-6Y C5,15-meth 98.4 1.2E-06 4.1E-11 75.1 10.1 99 17-125 65-164 (204)
79 1yzh_A TRNA (guanine-N(7)-)-me 98.4 1.1E-06 3.6E-11 76.2 9.8 101 18-125 67-179 (214)
80 3jwh_A HEN1; methyltransferase 98.4 4.4E-07 1.5E-11 78.4 6.6 80 17-96 54-142 (217)
81 3jwg_A HEN1, methyltransferase 98.4 4.3E-07 1.5E-11 78.5 6.4 80 17-96 54-142 (219)
82 2fca_A TRNA (guanine-N(7)-)-me 98.4 9.7E-07 3.3E-11 77.0 8.2 100 18-124 64-175 (213)
83 3mcz_A O-methyltransferase; ad 98.3 7E-07 2.4E-11 83.2 7.6 119 20-147 207-350 (352)
84 3grz_A L11 mtase, ribosomal pr 98.3 4.8E-07 1.6E-11 77.5 5.8 119 18-153 85-204 (205)
85 3m70_A Tellurite resistance pr 98.3 5.5E-07 1.9E-11 81.2 6.2 79 17-96 143-224 (286)
86 1fbn_A MJ fibrillarin homologu 98.3 2.4E-06 8.1E-11 75.0 10.1 117 6-130 74-215 (230)
87 1xdz_A Methyltransferase GIDB; 98.3 8.3E-07 2.8E-11 78.4 7.0 101 18-126 96-200 (240)
88 3ggd_A SAM-dependent methyltra 98.3 5.5E-07 1.9E-11 79.1 5.8 92 5-98 55-166 (245)
89 1qzz_A RDMB, aclacinomycin-10- 98.3 1.4E-06 4.9E-11 81.6 8.9 106 19-127 209-338 (374)
90 2ip2_A Probable phenazine-spec 98.3 1.2E-06 4.1E-11 81.0 7.7 106 19-127 194-321 (334)
91 4a6d_A Hydroxyindole O-methylt 98.3 4.1E-06 1.4E-10 78.8 11.3 115 26-148 212-348 (353)
92 1x19_A CRTF-related protein; m 98.3 2.1E-06 7.3E-11 80.3 9.3 107 18-127 216-347 (359)
93 3bkx_A SAM-dependent methyltra 98.3 7.3E-06 2.5E-10 73.0 12.3 94 5-98 42-162 (275)
94 2qe6_A Uncharacterized protein 98.3 1E-06 3.5E-11 80.3 6.3 80 18-98 106-199 (274)
95 3m33_A Uncharacterized protein 98.2 1.1E-06 3.9E-11 76.8 6.2 103 6-125 48-164 (226)
96 3g07_A 7SK snRNA methylphospha 98.2 4.6E-07 1.6E-11 82.9 3.6 87 41-127 154-268 (292)
97 3mti_A RRNA methylase; SAM-dep 98.2 1E-06 3.6E-11 74.0 5.5 93 5-97 21-137 (185)
98 3bgv_A MRNA CAP guanine-N7 met 98.2 1E-06 3.5E-11 80.8 5.3 92 6-97 34-157 (313)
99 3thr_A Glycine N-methyltransfe 98.2 8E-07 2.7E-11 80.2 4.1 80 17-96 80-176 (293)
100 1tw3_A COMT, carminomycin 4-O- 98.2 3.7E-06 1.3E-10 78.4 8.3 104 21-127 212-338 (360)
101 3lpm_A Putative methyltransfer 98.2 5.5E-06 1.9E-10 74.0 8.8 103 18-128 74-201 (259)
102 3g89_A Ribosomal RNA small sub 98.2 3.6E-06 1.2E-10 75.6 7.4 102 18-127 106-211 (249)
103 1dus_A MJ0882; hypothetical pr 98.1 9.2E-06 3.2E-10 67.6 9.4 92 6-98 52-160 (194)
104 4e2x_A TCAB9; kijanose, tetron 98.1 2.5E-07 8.7E-12 88.3 -0.3 121 6-127 107-252 (416)
105 2pwy_A TRNA (adenine-N(1)-)-me 98.1 3.4E-06 1.2E-10 74.3 6.8 112 5-127 95-223 (258)
106 2avn_A Ubiquinone/menaquinone 98.1 1.4E-06 4.7E-11 77.7 4.3 87 6-97 54-154 (260)
107 1af7_A Chemotaxis receptor met 98.1 1.4E-06 4.9E-11 79.8 4.4 77 18-94 139-251 (274)
108 3bwc_A Spermidine synthase; SA 98.1 4.6E-06 1.6E-10 77.0 7.6 119 5-126 94-238 (304)
109 3lst_A CALO1 methyltransferase 98.1 7E-06 2.4E-10 76.7 8.9 85 40-127 231-335 (348)
110 1wzn_A SAM-dependent methyltra 98.1 2.8E-06 9.5E-11 74.8 5.8 89 7-96 42-146 (252)
111 3dxy_A TRNA (guanine-N(7)-)-me 98.1 1.3E-06 4.5E-11 76.9 3.5 78 19-96 61-151 (218)
112 1l3i_A Precorrin-6Y methyltran 98.1 8.1E-06 2.8E-10 67.9 8.2 109 6-125 33-156 (192)
113 1yb2_A Hypothetical protein TA 98.1 5E-06 1.7E-10 75.0 6.5 97 18-126 137-235 (275)
114 3njr_A Precorrin-6Y methylase; 98.0 1.8E-05 6.1E-10 68.5 9.6 108 6-124 55-176 (204)
115 3ckk_A TRNA (guanine-N(7)-)-me 98.0 3.3E-06 1.1E-10 75.2 5.0 99 18-123 72-190 (235)
116 3reo_A (ISO)eugenol O-methyltr 98.0 3.5E-06 1.2E-10 79.7 5.4 85 40-127 245-354 (368)
117 3p9c_A Caffeic acid O-methyltr 98.0 3.5E-06 1.2E-10 79.6 5.1 85 40-127 243-352 (364)
118 3dmg_A Probable ribosomal RNA 98.0 4.7E-06 1.6E-10 79.7 6.0 92 6-97 233-342 (381)
119 3hm2_A Precorrin-6Y C5,15-meth 98.0 1.1E-05 3.6E-10 66.9 7.5 95 18-123 51-148 (178)
120 3p9n_A Possible methyltransfer 98.0 3.6E-06 1.2E-10 71.3 4.2 81 18-98 69-156 (189)
121 3mq2_A 16S rRNA methyltransfer 98.0 3.9E-05 1.3E-09 66.1 10.8 107 18-125 53-181 (218)
122 2b3t_A Protein methyltransfera 98.0 9.5E-06 3.2E-10 73.2 7.0 99 18-125 135-260 (276)
123 1i9g_A Hypothetical protein RV 98.0 1.2E-05 4.2E-10 71.9 7.7 99 18-127 126-229 (280)
124 1fp1_D Isoliquiritigenin 2'-O- 98.0 3.7E-06 1.3E-10 79.3 4.4 85 40-127 251-359 (372)
125 3mb5_A SAM-dependent methyltra 98.0 1.3E-05 4.4E-10 70.8 7.7 98 18-127 120-221 (255)
126 2ipx_A RRNA 2'-O-methyltransfe 98.0 7E-06 2.4E-10 71.9 5.9 122 6-130 77-219 (233)
127 3eey_A Putative rRNA methylase 98.0 1.8E-05 6.2E-10 67.0 8.3 80 18-97 49-141 (197)
128 3giw_A Protein of unknown func 98.0 4.4E-06 1.5E-10 76.9 4.7 83 16-98 105-203 (277)
129 1fp2_A Isoflavone O-methyltran 98.0 4.8E-06 1.6E-10 77.9 4.4 99 20-127 216-340 (352)
130 1p91_A Ribosomal RNA large sub 97.9 8.3E-06 2.9E-10 72.6 5.5 83 6-98 85-181 (269)
131 3lbf_A Protein-L-isoaspartate 97.9 8.9E-06 3E-10 69.7 5.3 87 6-97 77-176 (210)
132 3q7e_A Protein arginine N-meth 97.9 1.3E-05 4.4E-10 75.4 6.8 75 18-93 91-171 (349)
133 1o54_A SAM-dependent O-methylt 97.9 2.2E-05 7.4E-10 70.7 7.5 109 6-126 112-237 (277)
134 2qm3_A Predicted methyltransfe 97.9 2E-05 6.9E-10 74.6 7.6 104 18-123 197-304 (373)
135 1nt2_A Fibrillarin-like PRE-rR 97.9 5.5E-05 1.9E-09 65.9 9.6 122 5-130 56-197 (210)
136 2fyt_A Protein arginine N-meth 97.9 1.8E-05 6.2E-10 74.1 6.8 86 6-92 64-168 (340)
137 3uwp_A Histone-lysine N-methyl 97.9 2.9E-06 9.9E-11 82.4 1.3 80 19-98 200-291 (438)
138 3q87_B N6 adenine specific DNA 97.9 2.1E-05 7.2E-10 65.9 6.3 103 7-126 24-147 (170)
139 3htx_A HEN1; HEN1, small RNA m 97.8 2.1E-05 7E-10 82.2 7.3 80 17-97 747-836 (950)
140 2ift_A Putative methylase HI07 97.8 8.5E-06 2.9E-10 70.2 3.4 81 18-98 78-166 (201)
141 1vbf_A 231AA long hypothetical 97.8 2.8E-05 9.5E-10 67.5 6.6 86 6-97 70-167 (231)
142 3p2e_A 16S rRNA methylase; met 97.8 9.1E-06 3.1E-10 71.8 3.3 108 18-125 50-182 (225)
143 2yvl_A TRMI protein, hypotheti 97.8 9.1E-05 3.1E-09 64.7 9.4 110 5-126 90-213 (248)
144 2fpo_A Methylase YHHF; structu 97.8 1.7E-05 6E-10 68.3 4.7 80 18-97 79-162 (202)
145 2nxc_A L11 mtase, ribosomal pr 97.8 1.7E-05 5.8E-10 71.1 4.6 111 6-126 120-242 (254)
146 4dzr_A Protein-(glutamine-N5) 97.8 9.4E-07 3.2E-11 75.1 -3.6 101 18-126 56-190 (215)
147 2ozv_A Hypothetical protein AT 97.8 6.7E-05 2.3E-09 67.3 8.4 79 18-96 62-171 (260)
148 2yxe_A Protein-L-isoaspartate 97.8 4.3E-05 1.5E-09 65.5 6.8 87 6-97 77-179 (215)
149 2frn_A Hypothetical protein PH 97.7 8.5E-05 2.9E-09 67.4 8.7 100 19-123 151-252 (278)
150 2yxd_A Probable cobalt-precorr 97.7 7.3E-05 2.5E-09 61.6 7.6 104 6-122 35-151 (183)
151 3iv6_A Putative Zn-dependent a 97.7 2.6E-05 8.9E-10 71.0 4.9 86 6-97 45-150 (261)
152 2pjd_A Ribosomal RNA small sub 97.7 3.2E-05 1.1E-09 72.3 5.6 79 17-97 221-305 (343)
153 2fhp_A Methylase, putative; al 97.7 1.3E-05 4.6E-10 66.8 2.6 81 18-98 69-157 (187)
154 3r0q_C Probable protein argini 97.7 3.7E-05 1.3E-09 73.0 5.8 88 6-95 63-169 (376)
155 1r18_A Protein-L-isoaspartate( 97.7 4.6E-05 1.6E-09 66.3 5.8 74 18-97 116-196 (227)
156 1i1n_A Protein-L-isoaspartate 97.6 7.5E-05 2.6E-09 64.6 6.7 89 4-97 75-184 (226)
157 1dl5_A Protein-L-isoaspartate 97.6 3.7E-05 1.3E-09 70.9 5.0 73 19-96 103-176 (317)
158 3tma_A Methyltransferase; thum 97.6 6.5E-05 2.2E-09 70.3 6.7 81 17-97 229-319 (354)
159 1g8a_A Fibrillarin-like PRE-rR 97.6 0.00023 7.9E-09 61.6 9.7 120 5-129 72-213 (227)
160 1ej0_A FTSJ; methyltransferase 97.6 8.1E-05 2.8E-09 60.5 6.4 92 5-98 21-139 (180)
161 1jsx_A Glucose-inhibited divis 97.6 5.5E-05 1.9E-09 64.4 5.5 75 18-96 91-166 (207)
162 1jg1_A PIMT;, protein-L-isoasp 97.6 8.6E-05 2.9E-09 65.0 6.9 86 6-97 91-191 (235)
163 2pbf_A Protein-L-isoaspartate 97.6 5.2E-05 1.8E-09 65.7 5.4 75 18-97 111-195 (227)
164 1g6q_1 HnRNP arginine N-methyl 97.6 7.6E-05 2.6E-09 69.4 6.8 73 19-92 64-142 (328)
165 3adn_A Spermidine synthase; am 97.6 0.00014 4.7E-09 67.1 8.3 77 19-95 110-198 (294)
166 3gdh_A Trimethylguanosine synt 97.6 1.5E-06 5E-11 76.3 -4.8 77 17-94 101-180 (241)
167 1ixk_A Methyltransferase; open 97.6 0.00013 4.3E-09 67.6 8.0 102 18-123 145-270 (315)
168 2esr_A Methyltransferase; stru 97.6 1.3E-05 4.5E-10 66.7 1.0 81 18-98 56-141 (177)
169 1zg3_A Isoflavanone 4'-O-methy 97.6 0.00018 6.2E-09 67.2 8.6 85 40-127 235-346 (358)
170 2vdv_E TRNA (guanine-N(7)-)-me 97.6 8.8E-05 3E-09 65.6 6.0 78 18-95 75-173 (246)
171 3gjy_A Spermidine synthase; AP 97.5 8.4E-05 2.9E-09 69.6 5.7 81 17-97 114-202 (317)
172 3dr5_A Putative O-methyltransf 97.5 3.4E-05 1.1E-09 67.9 2.8 79 16-96 81-164 (221)
173 3sso_A Methyltransferase; macr 97.5 2.8E-05 9.6E-10 75.2 2.0 57 40-97 263-326 (419)
174 4dcm_A Ribosomal RNA large sub 97.5 9E-05 3.1E-09 70.6 5.5 80 17-97 247-336 (375)
175 2b2c_A Spermidine synthase; be 97.5 0.00018 6E-09 67.0 7.1 78 18-95 134-222 (314)
176 3id6_C Fibrillarin-like rRNA/T 97.5 0.00032 1.1E-08 62.7 8.5 125 4-131 74-219 (232)
177 3u81_A Catechol O-methyltransf 97.5 3.5E-05 1.2E-09 67.0 2.1 81 17-98 84-173 (221)
178 3ntv_A MW1564 protein; rossman 97.5 4.8E-05 1.6E-09 66.8 3.0 79 16-96 95-177 (232)
179 1iy9_A Spermidine synthase; ro 97.5 0.00016 5.4E-09 65.8 6.3 105 18-126 101-216 (275)
180 1ws6_A Methyltransferase; stru 97.4 2.7E-05 9.3E-10 63.8 0.6 79 19-98 66-150 (171)
181 2b25_A Hypothetical protein; s 97.4 9.6E-05 3.3E-09 68.5 4.5 76 18-97 132-221 (336)
182 2i7c_A Spermidine synthase; tr 97.4 0.00034 1.2E-08 63.8 7.8 91 6-96 78-193 (283)
183 3tfw_A Putative O-methyltransf 97.4 7.6E-05 2.6E-09 66.4 3.4 79 17-97 89-172 (248)
184 2y1w_A Histone-arginine methyl 97.4 0.00015 5E-09 68.0 5.5 87 6-94 50-154 (348)
185 1uir_A Polyamine aminopropyltr 97.4 6.8E-05 2.3E-09 69.5 3.0 78 18-95 103-195 (314)
186 2xyq_A Putative 2'-O-methyl tr 97.3 0.00027 9.1E-09 65.3 6.3 78 41-126 105-195 (290)
187 1xj5_A Spermidine synthase 1; 97.3 0.00014 4.7E-09 68.4 4.2 77 18-94 146-234 (334)
188 2plw_A Ribosomal RNA methyltra 97.3 0.00032 1.1E-08 59.3 6.0 92 5-97 21-156 (201)
189 3c3p_A Methyltransferase; NP_9 97.3 0.0001 3.6E-09 63.2 2.9 77 17-96 82-161 (210)
190 1inl_A Spermidine synthase; be 97.3 0.0003 1E-08 64.6 6.0 78 18-95 116-205 (296)
191 2gpy_A O-methyltransferase; st 97.3 0.00013 4.4E-09 63.6 3.4 79 17-97 79-162 (233)
192 2o07_A Spermidine synthase; st 97.3 9.9E-05 3.4E-09 68.2 2.8 91 6-96 95-210 (304)
193 2pt6_A Spermidine synthase; tr 97.3 0.00071 2.4E-08 62.9 8.5 79 18-96 142-231 (321)
194 3a27_A TYW2, uncharacterized p 97.2 0.00028 9.7E-09 63.8 5.1 77 18-98 145-222 (272)
195 1o9g_A RRNA methyltransferase; 97.2 0.00016 5.4E-09 63.9 3.1 52 45-96 149-215 (250)
196 3bzb_A Uncharacterized protein 97.2 0.00086 2.9E-08 60.7 7.7 106 18-125 104-234 (281)
197 2yxl_A PH0851 protein, 450AA l 97.2 0.0012 4.2E-08 63.9 9.3 81 18-98 286-392 (450)
198 2bm8_A Cephalosporin hydroxyla 97.1 0.00011 3.6E-09 65.2 1.0 55 40-96 129-188 (236)
199 3tr6_A O-methyltransferase; ce 97.1 0.0001 3.5E-09 63.6 0.7 79 17-97 90-176 (225)
200 3hp7_A Hemolysin, putative; st 97.1 0.00027 9.3E-09 65.3 3.4 102 18-125 110-229 (291)
201 1u2z_A Histone-lysine N-methyl 97.0 0.00028 9.7E-09 68.6 3.4 91 6-96 242-360 (433)
202 3tm4_A TRNA (guanine N2-)-meth 97.0 0.00087 3E-08 63.4 6.5 97 18-126 243-350 (373)
203 2cmg_A Spermidine synthase; tr 97.0 0.0004 1.4E-08 62.8 3.7 83 6-95 72-171 (262)
204 3ajd_A Putative methyltransfer 97.0 0.00069 2.3E-08 61.1 5.3 81 17-97 109-213 (274)
205 3fzg_A 16S rRNA methylase; met 97.0 8.7E-05 3E-09 65.0 -0.7 77 16-95 73-152 (200)
206 3b3j_A Histone-arginine methyl 97.0 0.00034 1.2E-08 68.8 3.3 75 18-94 183-262 (480)
207 3duw_A OMT, O-methyltransferas 97.0 0.00025 8.6E-09 61.1 2.1 79 17-97 84-169 (223)
208 2h00_A Methyltransferase 10 do 97.0 0.00013 4.4E-09 64.5 0.1 119 7-126 66-236 (254)
209 2igt_A SAM dependent methyltra 96.9 0.00061 2.1E-08 63.7 4.3 105 17-122 176-298 (332)
210 1mjf_A Spermidine synthase; sp 96.9 0.00038 1.3E-08 63.3 2.8 89 6-95 75-193 (281)
211 1sui_A Caffeoyl-COA O-methyltr 96.9 0.00034 1.2E-08 62.4 2.2 78 17-96 105-191 (247)
212 3cbg_A O-methyltransferase; cy 96.8 0.0006 2E-08 59.8 3.1 78 18-97 99-184 (232)
213 3r3h_A O-methyltransferase, SA 96.8 6.8E-05 2.3E-09 66.7 -3.2 78 18-97 87-172 (242)
214 3lec_A NADB-rossmann superfami 96.8 0.0038 1.3E-07 55.7 8.1 98 20-127 49-148 (230)
215 2efj_A 3,7-dimethylxanthine me 96.8 0.0012 4E-08 63.3 5.0 77 48-124 138-257 (384)
216 4hc4_A Protein arginine N-meth 96.8 0.0015 5.2E-08 62.3 5.8 85 6-92 83-186 (376)
217 2nyu_A Putative ribosomal RNA 96.7 0.0019 6.4E-08 54.1 5.4 58 41-98 70-148 (196)
218 3b5i_A S-adenosyl-L-methionine 96.7 0.0013 4.6E-08 62.7 5.0 53 48-100 139-230 (374)
219 2f8l_A Hypothetical protein LM 96.7 0.0023 8E-08 59.4 6.4 100 19-122 162-280 (344)
220 3opn_A Putative hemolysin; str 96.6 6.4E-05 2.2E-09 66.8 -4.3 101 18-125 62-181 (232)
221 2frx_A Hypothetical protein YE 96.6 0.0032 1.1E-07 61.9 7.3 80 18-97 144-248 (479)
222 2hnk_A SAM-dependent O-methylt 96.6 0.00059 2E-08 59.7 1.6 77 18-96 87-182 (239)
223 1nv8_A HEMK protein; class I a 96.6 0.0027 9.2E-08 57.8 6.0 77 17-95 147-249 (284)
224 2avd_A Catechol-O-methyltransf 96.6 0.00059 2E-08 58.9 1.3 78 17-96 95-180 (229)
225 1sqg_A SUN protein, FMU protei 96.5 0.0026 8.8E-08 61.2 5.9 80 18-97 272-376 (429)
226 1m6e_X S-adenosyl-L-methionnin 96.5 0.0045 1.5E-07 58.8 7.3 78 48-125 128-246 (359)
227 1ne2_A Hypothetical protein TA 96.5 0.0026 8.9E-08 53.8 5.1 83 19-119 77-162 (200)
228 1wy7_A Hypothetical protein PH 96.5 0.013 4.5E-07 49.4 9.4 94 18-123 74-170 (207)
229 4azs_A Methyltransferase WBDD; 96.4 0.00043 1.5E-08 69.2 -0.5 82 16-97 88-175 (569)
230 3c3y_A Pfomt, O-methyltransfer 96.4 0.00095 3.2E-08 58.8 1.7 78 17-96 96-182 (237)
231 3gnl_A Uncharacterized protein 96.4 0.0075 2.6E-07 54.2 7.5 99 19-127 48-148 (244)
232 2oxt_A Nucleoside-2'-O-methylt 96.3 0.008 2.7E-07 54.3 7.4 53 42-97 123-187 (265)
233 3m6w_A RRNA methylase; rRNA me 96.3 0.0033 1.1E-07 61.6 4.8 80 18-97 128-231 (464)
234 2b78_A Hypothetical protein SM 96.2 0.0053 1.8E-07 58.3 5.9 102 18-121 237-355 (385)
235 3m4x_A NOL1/NOP2/SUN family pr 96.2 0.0043 1.5E-07 60.7 5.3 101 18-122 132-257 (456)
236 2wa2_A Non-structural protein 96.2 0.0084 2.9E-07 54.6 6.9 53 42-97 131-195 (276)
237 1zq9_A Probable dimethyladenos 96.2 0.0018 6.1E-08 59.0 2.2 85 6-92 28-144 (285)
238 2as0_A Hypothetical protein PH 96.2 0.0042 1.4E-07 58.9 4.8 81 18-98 242-338 (396)
239 1wxx_A TT1595, hypothetical pr 96.2 0.0069 2.3E-07 57.2 6.3 100 19-120 234-348 (382)
240 3c0k_A UPF0064 protein YCCW; P 96.1 0.0055 1.9E-07 58.1 5.5 102 18-121 245-363 (396)
241 2yx1_A Hypothetical protein MJ 96.0 0.0049 1.7E-07 57.3 4.6 87 6-98 195-294 (336)
242 3v97_A Ribosomal RNA large sub 95.9 0.003 1E-07 64.9 2.7 95 19-121 565-675 (703)
243 4dmg_A Putative uncharacterize 95.8 0.013 4.4E-07 56.1 6.6 114 6-121 214-350 (393)
244 3kr9_A SAM-dependent methyltra 95.8 0.015 5.1E-07 51.6 6.5 97 19-126 42-141 (225)
245 2p41_A Type II methyltransfera 95.8 0.016 5.4E-07 53.4 7.0 55 41-97 131-193 (305)
246 3dou_A Ribosomal RNA large sub 95.7 0.0097 3.3E-07 50.7 4.7 58 41-98 62-142 (191)
247 3frh_A 16S rRNA methylase; met 95.7 0.013 4.5E-07 53.0 5.6 78 16-95 126-206 (253)
248 1uwv_A 23S rRNA (uracil-5-)-me 95.5 0.045 1.5E-06 52.6 9.2 97 18-125 310-411 (433)
249 2qfm_A Spermine synthase; sper 95.4 0.0072 2.5E-07 57.5 3.2 91 6-96 188-315 (364)
250 2qy6_A UPF0209 protein YFCK; s 95.4 0.0098 3.3E-07 53.7 3.6 72 41-123 150-230 (257)
251 3ldg_A Putative uncharacterize 95.2 0.041 1.4E-06 52.4 7.7 80 17-97 257-345 (384)
252 3k6r_A Putative transferase PH 95.2 0.023 8E-07 51.9 5.7 114 4-122 123-251 (278)
253 3k0b_A Predicted N6-adenine-sp 95.1 0.031 1.1E-06 53.3 6.6 80 17-97 264-352 (393)
254 2okc_A Type I restriction enzy 95.1 0.025 8.4E-07 54.5 5.7 77 19-96 211-308 (445)
255 2jjq_A Uncharacterized RNA met 94.9 0.04 1.4E-06 53.1 6.8 74 18-95 314-387 (425)
256 3o4f_A Spermidine synthase; am 94.9 0.18 6.1E-06 46.5 10.8 78 19-96 110-199 (294)
257 3lcv_B Sisomicin-gentamicin re 94.7 0.058 2E-06 49.3 6.8 104 16-121 156-265 (281)
258 3ldu_A Putative methylase; str 94.6 0.048 1.6E-06 51.8 6.2 80 17-97 258-346 (385)
259 2h1r_A Dimethyladenosine trans 93.8 0.037 1.3E-06 50.5 3.6 65 6-72 42-119 (299)
260 2zig_A TTHA0409, putative modi 93.0 0.048 1.6E-06 49.6 3.0 89 41-129 20-138 (297)
261 1yub_A Ermam, rRNA methyltrans 92.6 0.0025 8.7E-08 56.2 -6.0 87 6-94 29-144 (245)
262 2ih2_A Modification methylase 92.6 0.4 1.4E-05 44.8 8.8 80 41-124 81-190 (421)
263 3evf_A RNA-directed RNA polyme 91.4 0.49 1.7E-05 43.2 7.6 56 42-97 123-186 (277)
264 3cvo_A Methyltransferase-like 90.6 0.41 1.4E-05 41.6 6.0 75 17-95 52-154 (202)
265 3v97_A Ribosomal RNA large sub 90.6 0.39 1.3E-05 49.1 6.8 80 17-96 257-348 (703)
266 1boo_A Protein (N-4 cytosine-s 90.5 0.22 7.5E-06 45.9 4.4 84 41-124 13-116 (323)
267 2b9e_A NOL1/NOP2/SUN domain fa 90.3 0.44 1.5E-05 43.8 6.2 78 18-96 129-235 (309)
268 3vyw_A MNMC2; tRNA wobble urid 90.2 0.26 8.9E-06 45.7 4.6 72 42-124 167-244 (308)
269 2ar0_A M.ecoki, type I restric 90.2 0.23 7.9E-06 49.2 4.5 100 19-121 214-336 (541)
270 2dul_A N(2),N(2)-dimethylguano 90.1 0.12 4E-06 49.1 2.2 75 18-95 73-164 (378)
271 1qam_A ERMC' methyltransferase 88.7 0.2 6.7E-06 44.2 2.5 63 6-70 30-105 (244)
272 3bt7_A TRNA (uracil-5-)-methyl 88.2 0.37 1.3E-05 45.1 4.1 74 18-96 237-327 (369)
273 3gru_A Dimethyladenosine trans 88.1 0.38 1.3E-05 44.1 4.1 65 6-71 50-126 (295)
274 3axs_A Probable N(2),N(2)-dime 87.4 0.3 1E-05 46.6 3.0 74 19-95 80-158 (392)
275 1g60_A Adenine-specific methyl 86.6 1.5 5E-05 38.8 7.0 67 55-129 19-101 (260)
276 3khk_A Type I restriction-modi 86.2 0.91 3.1E-05 45.0 5.9 102 20-122 287-421 (544)
277 3c6k_A Spermine synthase; sper 80.1 2.2 7.6E-05 40.5 5.6 88 8-95 207-331 (381)
278 3lkd_A Type I restriction-modi 78.1 5.5 0.00019 39.4 8.0 101 20-122 252-383 (542)
279 4gqb_A Protein arginine N-meth 76.5 3.8 0.00013 41.5 6.3 51 40-92 410-464 (637)
280 1eg2_A Modification methylase 75.3 2.2 7.7E-05 39.2 4.0 54 43-96 39-107 (319)
281 2wk1_A NOVP; transferase, O-me 74.4 3.4 0.00012 37.5 4.9 68 28-96 173-245 (282)
282 3ua3_A Protein arginine N-meth 73.2 3.1 0.00011 42.8 4.7 54 39-92 470-531 (745)
283 2vz8_A Fatty acid synthase; tr 72.0 1.7 5.8E-05 50.6 2.8 42 55-96 1307-1349(2512)
284 2oyr_A UPF0341 protein YHIQ; a 71.1 0.78 2.7E-05 41.2 -0.2 73 17-89 111-194 (258)
285 2r6z_A UPF0341 protein in RSP 70.9 0.34 1.2E-05 43.3 -2.6 71 17-87 106-189 (258)
286 3tqs_A Ribosomal RNA small sub 66.5 1.7 5.9E-05 38.6 1.0 61 6-68 29-105 (255)
287 3fut_A Dimethyladenosine trans 64.6 1.9 6.6E-05 38.7 1.0 53 17-71 69-122 (271)
288 1m6y_A S-adenosyl-methyltransf 64.2 1.7 5.8E-05 39.7 0.6 52 17-68 51-107 (301)
289 4fzv_A Putative methyltransfer 61.2 12 0.00041 35.0 5.8 55 41-95 204-284 (359)
290 4auk_A Ribosomal RNA large sub 60.3 35 0.0012 32.2 8.9 80 40-122 251-334 (375)
291 3gcz_A Polyprotein; flavivirus 58.3 13 0.00043 33.9 5.2 55 43-97 140-203 (282)
292 3eld_A Methyltransferase; flav 53.9 39 0.0013 30.9 7.8 45 53-97 141-193 (300)
293 2px2_A Genome polyprotein [con 48.8 75 0.0026 28.6 8.6 52 44-97 125-185 (269)
294 2hwk_A Helicase NSP2; rossman 45.4 37 0.0013 31.2 6.1 62 58-125 205-278 (320)
295 3ps9_A TRNA 5-methylaminomethy 45.4 14 0.00047 36.9 3.6 56 57-123 177-236 (676)
296 3ll7_A Putative methyltransfer 43.4 4 0.00014 39.1 -0.7 61 7-67 94-171 (410)
297 3r24_A NSP16, 2'-O-methyl tran 43.3 28 0.00097 32.3 5.0 73 44-126 155-239 (344)
298 3trk_A Nonstructural polyprote 42.8 11 0.00036 34.5 2.1 45 54-98 206-262 (324)
299 4gua_A Non-structural polyprot 42.3 16 0.00053 36.7 3.3 44 53-97 216-271 (670)
300 3rht_A (gatase1)-like protein; 42.1 62 0.0021 28.7 7.1 77 9-95 6-86 (259)
301 4gi5_A Quinone reductase; prot 40.0 1.1E+02 0.0037 27.4 8.4 45 75-122 101-145 (280)
302 3pvc_A TRNA 5-methylaminomethy 37.8 28 0.00095 34.8 4.5 71 42-123 149-228 (689)
303 3nbm_A PTS system, lactose-spe 36.0 85 0.0029 23.9 6.1 74 9-92 8-81 (108)
304 3tos_A CALS11; methyltransfera 33.6 28 0.00097 30.9 3.4 57 40-97 157-219 (257)
305 3s1s_A Restriction endonucleas 33.5 52 0.0018 34.5 5.7 54 44-97 383-467 (878)
306 3cdw_H Protein 3B, VPG; RNA-de 33.5 21 0.00071 20.8 1.6 20 250-269 2-21 (26)
307 3gj3_B Nuclear pore complex pr 30.5 16 0.00056 22.3 0.9 16 234-249 7-27 (33)
308 2zki_A 199AA long hypothetical 30.5 1.7E+02 0.0057 23.5 7.6 65 59-124 70-143 (199)
309 1qyr_A KSGA, high level kasuga 28.0 9.4 0.00032 33.6 -0.8 50 19-69 46-100 (252)
310 3uzu_A Ribosomal RNA small sub 27.8 16 0.00055 32.7 0.7 46 19-67 71-122 (279)
311 3f6r_A Flavodoxin; FMN binding 27.6 2E+02 0.007 21.8 9.8 66 59-124 49-121 (148)
312 3ny7_A YCHM protein, sulfate t 27.0 1.2E+02 0.0042 22.7 5.7 50 63-123 50-101 (118)
313 3ftd_A Dimethyladenosine trans 27.0 55 0.0019 28.4 4.1 62 17-83 55-117 (249)
314 2k4x_A 30S ribosomal protein S 24.8 23 0.00078 24.1 0.9 10 243-252 36-45 (55)
315 1wg8_A Predicted S-adenosylmet 24.5 34 0.0012 31.1 2.2 24 74-97 212-235 (285)
316 3tka_A Ribosomal RNA small sub 23.4 36 0.0012 31.8 2.2 24 74-97 253-276 (347)
317 2oo3_A Protein involved in cat 23.3 3.9E+02 0.013 23.9 9.1 76 40-120 136-218 (283)
318 3ufb_A Type I restriction-modi 22.8 1.8E+02 0.0062 28.2 7.3 96 23-122 261-387 (530)
319 3ktp_B Trinucleotide repeat-co 20.7 31 0.001 19.2 0.7 9 254-262 7-15 (22)
320 1gl0_I Protease inhibitor LCMI 20.5 27 0.00093 21.7 0.5 18 195-212 2-20 (35)
321 2ebr_A Nuclear pore complex pr 20.4 33 0.0011 22.6 0.9 17 233-249 10-31 (47)
322 2ebq_A Nuclear pore complex pr 20.0 32 0.0011 22.7 0.8 18 233-250 10-32 (47)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.71 E-value=6.1e-17 Score=137.09 Aligned_cols=146 Identities=22% Similarity=0.319 Sum_probs=109.2
Q ss_pred ccccceEEEEecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCC---CCCceeEEEecCccCCC-C-hHHHH
Q 022285 4 GKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLSISSSHEL-P-GDQLL 78 (299)
Q Consensus 4 ~~~~~~vLlL~~~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~---~~~sfD~Vls~~~~~~~-~-~~~~L 78 (299)
.+.|++||.|+.+.+. .|+++.|++.|+++... ++.+.++|++.+|+ ++++||+|++.+++||+ + ...++
T Consensus 10 ~~~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l 84 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP--VEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEIL 84 (176)
T ss_dssp CCTTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHH
T ss_pred CCCCCEEEEecCCcee--eeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHH
Confidence 4578999999998754 99999999999876532 48999999999988 89999999999999998 5 78899
Q ss_pred HHHHHhccCCcEEEEEecCCCCcc--chHHHHHHHHHHHHHCCceeceeecccccCc--------------cceeeeeee
Q 022285 79 EEISRVLKPGGTILIYKKLTSDKG--DVDKAISALEGKLLLAGFLDAQRIQLKSVVP--------------AEVVSFGVK 142 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~~~~~g--~~~~~~~~l~~~L~laGFv~v~~~~~kp~~~--------------~~~~~~~i~ 142 (299)
++++|+|||||+|++..+.....+ .+....+++...|..+||+.+......+..+ +.+..+.++
T Consensus 85 ~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (176)
T 2ld4_A 85 AEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 164 (176)
T ss_dssp HHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCEEEEEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEE
T ss_pred HHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCcEeecCcccCCCHHHHHHHHHHhcccCCceEEEEEe
Confidence 999999999999999765321111 0111234788899999995433322111111 122355688
Q ss_pred ecCCCCCcCCcc
Q 022285 143 GKKPTWKIGSSF 154 (299)
Q Consensus 143 a~KP~~~~gs~~ 154 (299)
++||+|++|||+
T Consensus 165 a~Kp~~~~gs~~ 176 (176)
T 2ld4_A 165 GKKPNFEVGSSR 176 (176)
T ss_dssp EECCCSSCCSCC
T ss_pred ccCCcccccCCC
Confidence 999999999984
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.24 E-value=3.5e-11 Score=109.53 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=75.9
Q ss_pred ccccceEEEEecCC----------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEe
Q 022285 4 GKMQSAVLALSEDK----------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLS 65 (299)
Q Consensus 4 ~~~~~~vLlL~~~~----------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls 65 (299)
.+.|.+||-|--|+ .++..|+++.|++.|++++... ..++.++++|+.++|++ .||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cccccee
Confidence 35677788775433 3556799999999999887553 46899999999999875 5999999
Q ss_pred cCccCCCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 022285 66 ISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 66 ~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
++++|+++. ..++++++|+|||||.|++.+...
T Consensus 146 ~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 146 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 999999873 468999999999999999987653
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.08 E-value=1.8e-10 Score=102.85 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=89.7
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-|--|+ .++..|+++.|++.|++++... ..++.++.+|++.+|+++++||+|++..+++|+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~ 116 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHF 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhc
Confidence 456777775443 3456678899999998876543 468999999999999999999999999999998
Q ss_pred C-hHHHHHHHHHhccCCcEEEEEecCCCCccchH-----------------HHHHHHHHHHHHCCceecee
Q 022285 73 P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVD-----------------KAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~-----------------~~~~~l~~~L~laGFv~v~~ 125 (299)
+ +..++.+++|+|||||+|++.++......... .....+...|..+||..+..
T Consensus 117 ~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 187 (260)
T 1vl5_A 117 PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEEL 187 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEE
Confidence 8 78899999999999999999865422111010 01245677788899986653
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.03 E-value=6.9e-10 Score=96.01 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=92.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEe
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.++..|+++.|++.|++++... ..++.+..+|+..+++++++||+|++..++++++ ...++++++|+|||||.+++.+
T Consensus 64 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 64 KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 4556778899999998876543 3589999999999999999999999999999887 7889999999999999999987
Q ss_pred cCCCCc--cc-hH--HHHHHHHHHHHHCCceeceeecccccCccceeeeeeeecCCC
Q 022285 96 KLTSDK--GD-VD--KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (299)
Q Consensus 96 ~~~~~~--g~-~~--~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~a~KP~ 147 (299)
+..... +. .. ...+++...+..+||..+......+. .+.+.++||.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~------~~~~~~~k~~ 194 (219)
T 3dh0_A 144 WKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY------CFGVYAMIVK 194 (219)
T ss_dssp ECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT------EEEEEEECC-
T ss_pred ecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc------eEEEEEEecc
Confidence 653321 11 00 12357888999999998776543221 3345566653
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.03 E-value=9.1e-10 Score=94.40 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=85.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..+++|++ ...++++++|+|||||.+++.
T Consensus 68 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 68 SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEE
Confidence 4456678889999998876543 4589999999999999999999999999999887 788999999999999999998
Q ss_pred ecCCCCc-------------cch---------HHHHHHHHHHHHHCCceeceee
Q 022285 95 KKLTSDK-------------GDV---------DKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 95 ~~~~~~~-------------g~~---------~~~~~~l~~~L~laGFv~v~~~ 126 (299)
+...... ..+ ....+.+...|..+||..++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 148 GGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp ECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred eccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 6543210 000 0123577888999999887654
No 6
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.02 E-value=1e-09 Score=96.02 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=84.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh-H--HHHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D--QLLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~-~--~~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.|+++.... .++.++.+|+..+|++ ++||+|++..++++++. . .++++++|+|||||.|++
T Consensus 69 ~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 69 ATFTLVDMSEKMLEIAKNRFRGN-LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CEEEEEESCHHHHHHHHHHTCSC-TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHhhccC-CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 35567788899999998876443 3899999999999987 89999999999999883 2 589999999999999999
Q ss_pred EecCCCCccchH----H-----------------------------HHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGDVD----K-----------------------------AISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~~~----~-----------------------------~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+.......... . ..+++...|..+||..++...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 147 ADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp EEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEE
T ss_pred EEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeee
Confidence 886533211110 0 124566689999999987654
No 7
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.96 E-value=3e-09 Score=95.27 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=94.1
Q ss_pred cccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
+.+.+||-|-.|+ .++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 4466777775442 5667789999999998876543 357999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhccCCcEEEEEecCCC---CccchHHH----------HHHHHHHHHHCCceeceee
Q 022285 70 HELPGDQLLEEISRVLKPGGTILIYKKLTS---DKGDVDKA----------ISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~---~~g~~~~~----------~~~l~~~L~laGFv~v~~~ 126 (299)
+++....++++++|+|||||.+++.+..-. ........ ...+...+..+||..+...
T Consensus 125 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 125 YNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp GGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred eecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 888888899999999999999999875311 11111111 2467788999999987643
No 8
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.96 E-value=3.1e-09 Score=93.93 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=90.8
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-|--|+ .++..|+++.|++.+++++... ..++.++.+|++.+|+++++||+|++..+++|+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 100 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHF 100 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhc
Confidence 456777775443 3556688899999998776543 468999999999999999999999999988888
Q ss_pred C-hHHHHHHHHHhccCCcEEEEEecCCCCccchH-----------------HHHHHHHHHHHHCCceecee
Q 022285 73 P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVD-----------------KAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~-----------------~~~~~l~~~L~laGFv~v~~ 125 (299)
+ ...++.+++|+|||||+|++.+.......... ....++...|..+||..+..
T Consensus 101 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 171 (239)
T 1xxl_A 101 SDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDI 171 (239)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEE
Confidence 7 78899999999999999999876432111110 01346677888899987654
No 9
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.96 E-value=2.6e-10 Score=103.62 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=66.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.|+..|+++.|++.|++ .+++.+++++++++|+++++||+|++..++||++.+.+++|++|+|||||.|.+....
T Consensus 63 ~v~gvD~s~~ml~~a~~-----~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 63 RVHAVDPGEAQIRQALR-----HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp EEEEEESCHHHHHTCCC-----CTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEeCcHHhhhhhhh-----cCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECC
Confidence 44566888899876542 4789999999999999999999999999999999889999999999999999888765
Q ss_pred C
Q 022285 98 T 98 (299)
Q Consensus 98 ~ 98 (299)
.
T Consensus 138 ~ 138 (257)
T 4hg2_A 138 L 138 (257)
T ss_dssp C
T ss_pred C
Confidence 4
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.95 E-value=4.6e-09 Score=92.98 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=92.8
Q ss_pred cccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
+.+.+||-|-.|+ .++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 3456777775433 5567788899999998876543 345999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhccCCcEEEEEecC--CC-CccchHH----------HHHHHHHHHHHCCceeceee
Q 022285 70 HELPGDQLLEEISRVLKPGGTILIYKKL--TS-DKGDVDK----------AISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~--~~-~~g~~~~----------~~~~l~~~L~laGFv~v~~~ 126 (299)
++++...++++++|+|||||+|++.++. .. ....... ....+...|..+||..+...
T Consensus 125 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 125 YNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 9988888999999999999999998753 11 1111111 12467788999999987643
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.95 E-value=9.5e-10 Score=97.43 Aligned_cols=120 Identities=19% Similarity=0.248 Sum_probs=92.6
Q ss_pred ccceEEEEec-------------CCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSE-------------DKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~-------------~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-|-. +..++..|+++.|++.|+++.... .++.++.+|+..+|+++++||+|++..+++|+
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 4557777644 345667788899999998765443 78999999999999999999999999999998
Q ss_pred --C-hHHHHHHHHHhccCCcEEEEEecCCCCccc----hHH----------HHHHHHHHHHHCCceeceee
Q 022285 73 --P-GDQLLEEISRVLKPGGTILIYKKLTSDKGD----VDK----------AISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 73 --~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~----~~~----------~~~~l~~~L~laGFv~v~~~ 126 (299)
. ...++++++|+|||||.+++.++....... +.. ..+.+...+..+||..+...
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 4 678999999999999999999864332111 110 13577888999999887654
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.95 E-value=2.2e-09 Score=95.15 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=68.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEec
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.++..|+++.|++.|+++.. ..++.++.+|+..+|+++++||+|++..++++++ ...++++++|+|||||.|++..+
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 69 KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 56677888999999987654 5789999999999999999999999999999887 78899999999999999998743
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.94 E-value=1.4e-09 Score=96.37 Aligned_cols=119 Identities=13% Similarity=0.082 Sum_probs=89.4
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-|--| ..++..|+++.|++.|++++... ..++.++.+|+..+|+ +++||+|++..+++
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~ 114 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATW 114 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChH
Confidence 45577776443 34556688899999998876543 3589999999999998 88999999999888
Q ss_pred CCC-hHHHHHHHHHhccCCcEEEEEecCCCCccc---hH-----------HHHHHHHHHHHHCCceecee
Q 022285 71 ELP-GDQLLEEISRVLKPGGTILIYKKLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 71 ~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~---~~-----------~~~~~l~~~L~laGFv~v~~ 125 (299)
+++ ...++++++|+|||||+|++.++....... +. .....+...|..+||..+..
T Consensus 115 ~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 115 IAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp GTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 886 788999999999999999998753211100 00 01246778899999987754
No 14
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=98.93 E-value=2.8e-10 Score=94.19 Aligned_cols=106 Identities=18% Similarity=0.262 Sum_probs=73.4
Q ss_pred CCcccccceEEEEecCCccChHHHHHHHHHHHHHH-hhhcCCCeEEEec-cCCCCCCCCCceeEEEecCccC-C-CC-hH
Q 022285 1 MDTGKMQSAVLALSEDKILPVSAVLNAIRDLGDEA-VEQCDPQIITQAS-SLSQLPVESFSIDTVLSISSSH-E-LP-GD 75 (299)
Q Consensus 1 m~~~~~~~~vLlL~~~~~vt~~dlse~m~~~A~~~-~~~~~~~i~~~~g-d~~~Lp~~~~sfD~Vls~~~~~-~-~~-~~ 75 (299)
|+..+ ++|||.||+++|-++.++.++....+. ......++..+.+ ...+| ++++||.|+.....- . .. +.
T Consensus 4 ~~~~~---~~LLL~~Psv~t~pe~le~~k~~~~~~~~~~~d~qmlDRLa~G~VsL--p~stYD~V~~lt~~~~~~~~l~r 78 (136)
T 2km1_A 4 MSQYK---TGLLLIHPAVTTTPELVENTKAQAASKKVKFVDQFLINKLNDGSITL--ENAKYETVHYLTPEAQTDIKFPK 78 (136)
T ss_dssp ---CE---EEEEEECHHHHTSHHHHHHHHHHHHHTTEEEEEEEEHHHHHHTCCCC--CSSSCCSEEEECCCSSCSCCCCH
T ss_pred cccCC---CeEEecCCcccCCHHHHHHHHHhhhccccchhhHHHHHHHhcCcccC--CcccccEEEEecCCccchhhcCH
Confidence 55555 899999999999999999999876542 0011222222222 44455 599999999887432 2 22 47
Q ss_pred HHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 76 QLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 76 ~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
.+++.|++.|||||+|.- +.. ....+++++||+.+.
T Consensus 79 ~li~~l~~aLkpgG~L~g----------l~~---~~~~EailaGfvv~~ 114 (136)
T 2km1_A 79 KLISVLADSLKPNGSLIG----------LSD---IYKVDALINGFEIIN 114 (136)
T ss_dssp HHHHHHHTTCCTTCCEEC----------CCH---HHHHHHHHHTEEEEC
T ss_pred HHHHHHHHHhCCCCEEEe----------cCc---chhhHHHhhccEecc
Confidence 899999999999999984 111 456889999999654
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.92 E-value=1.7e-09 Score=98.24 Aligned_cols=122 Identities=19% Similarity=0.253 Sum_probs=92.9
Q ss_pred cccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
+.+.+||-|--| ..++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 345677777443 35566788899999998766443 468999999999999999999999999999
Q ss_pred CCCC-hHHHHHHHHHhccCCcEEEEEecCCCCc---cchHH-----------HHHHHHHHHHHCCceeceee
Q 022285 70 HELP-GDQLLEEISRVLKPGGTILIYKKLTSDK---GDVDK-----------AISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 70 ~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~~~~-----------~~~~l~~~L~laGFv~v~~~ 126 (299)
+|++ ...++++++|+|||||+|++.++..... ..... ....+...|..+||..++..
T Consensus 161 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 161 LHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 9887 6889999999999999999997642211 11111 13467778999999987654
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.90 E-value=5e-09 Score=90.63 Aligned_cols=105 Identities=19% Similarity=0.283 Sum_probs=81.2
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHH--HHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQ--LLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~--~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.++++.. .++.+..+|+..+|++ ++||+|++..++++++ ... ++++++|+|||||.+++
T Consensus 68 ~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 68 RTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp CEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 345677888999999887654 5899999999999988 9999999999999998 444 99999999999999999
Q ss_pred EecCCCCccchH---------------H--------HHHHHHHHHHHCCceecee
Q 022285 94 YKKLTSDKGDVD---------------K--------AISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 94 ~~~~~~~~g~~~---------------~--------~~~~l~~~L~laGFv~v~~ 125 (299)
.++......... . ..+.+...|..+||..+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 144 ADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp EEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred EeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 975432211110 0 1256778899999976543
No 17
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.89 E-value=5.1e-09 Score=91.33 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=88.7
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|--|+ .++..|+++.|++.|+++... ++.++++|++.+ +++++||+|++..+++|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 345677664433 456778899999999876533 899999999988 5788999999999999987
Q ss_pred -hHHHHHHHH-HhccCCcEEEEEecCCCCccc-----------------h--H------HHHHHHHHHHHHCCceeceee
Q 022285 74 -GDQLLEEIS-RVLKPGGTILIYKKLTSDKGD-----------------V--D------KAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 74 -~~~~L~ei~-RvLKPGG~l~i~~~~~~~~g~-----------------~--~------~~~~~l~~~L~laGFv~v~~~ 126 (299)
+..++++++ |+|||||+|++..+....... . . ....++...|..+||..++..
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 788999999 999999999998865431100 0 0 023577888999999887643
No 18
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.89 E-value=5.6e-09 Score=93.39 Aligned_cols=121 Identities=21% Similarity=0.295 Sum_probs=91.4
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-|--| ..++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..+++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLH 140 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhh
Confidence 45577777443 34556677889999998776543 3579999999999999999999999999999
Q ss_pred CCC-hHHHHHHHHHhccCCcEEEEEecCCCC-ccch-----HH-----------HHHHHHHHHHHCCceeceee
Q 022285 71 ELP-GDQLLEEISRVLKPGGTILIYKKLTSD-KGDV-----DK-----------AISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 71 ~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~-~g~~-----~~-----------~~~~l~~~L~laGFv~v~~~ 126 (299)
|++ ...++++++|+|||||++++.++.... .... .. ..+.+...+..+||..+...
T Consensus 141 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 214 (273)
T 3bus_A 141 HMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTV 214 (273)
T ss_dssp TSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred hCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEE
Confidence 987 788999999999999999998764321 1110 00 12567778899999887544
No 19
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.88 E-value=3.2e-09 Score=101.16 Aligned_cols=123 Identities=20% Similarity=0.218 Sum_probs=93.1
Q ss_pred cccceEEEEecCC---------------ccChHHHHHHHHHHHHHHhhhc---------CCCeEEEeccCCCC------C
Q 022285 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC---------DPQIITQASSLSQL------P 54 (299)
Q Consensus 5 ~~~~~vLlL~~~~---------------~vt~~dlse~m~~~A~~~~~~~---------~~~i~~~~gd~~~L------p 54 (299)
..|.+||-|--|+ .++..|+++.|++.|++++... ..++.++++|+..+ |
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 3566788775443 4556678899999998765432 26999999999998 9
Q ss_pred CCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEecCCCCc-c-chH-------------HHHHHHHHHHHHC
Q 022285 55 VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKLTSDK-G-DVD-------------KAISALEGKLLLA 118 (299)
Q Consensus 55 ~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~-g-~~~-------------~~~~~l~~~L~la 118 (299)
+++++||+|++..++++++ ...++++++|+|||||+|++.++..... . ... ..++++...|..+
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 9999999999999999987 7889999999999999999987543211 0 000 0126788899999
Q ss_pred Cceeceeec
Q 022285 119 GFLDAQRIQ 127 (299)
Q Consensus 119 GFv~v~~~~ 127 (299)
||..++...
T Consensus 242 GF~~v~~~~ 250 (383)
T 4fsd_A 242 GFRDVRLVS 250 (383)
T ss_dssp TCCCEEEEE
T ss_pred CCceEEEEe
Confidence 998775443
No 20
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=2.5e-09 Score=91.58 Aligned_cols=107 Identities=13% Similarity=0.102 Sum_probs=85.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.|+++ ..++.++.+|+..+|+++++||+|++..++++++ ...++++++|+|||||.|++
T Consensus 64 ~~v~gvD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 64 HQIEGLEPATRLVELARQT----HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp CCEEEECCCHHHHHHHHHH----CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred CeEEEEeCCHHHHHHHHHh----CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3566778889999988765 4579999999999999999999999999999885 57899999999999999999
Q ss_pred EecCCCCccchH--------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGDVD--------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~~~--------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
..+.......+. .....+...|..+||..+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 140 SFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp EEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 886543211110 1235788899999999876654
No 21
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.87 E-value=3.4e-09 Score=92.84 Aligned_cols=119 Identities=22% Similarity=0.176 Sum_probs=92.4
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|-.|+ .++..|+++.|++.++++. ...++.++.+|+..+|+++++||+|++..+++|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 456777775543 4567788899999988653 34689999999999999999999999999999988
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecCCCCccc---hH-----------HHHHHHHHHHHHCCceeceee
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~---~~-----------~~~~~l~~~L~laGFv~v~~~ 126 (299)
...++++++|+|||||.|++..+....... +. .....+...+..+||..++..
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 678999999999999999998764332110 00 113478888999999987654
No 22
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.87 E-value=4e-09 Score=96.82 Aligned_cols=110 Identities=18% Similarity=0.118 Sum_probs=84.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hH---HHHHHHHHhccCCcE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD---QLLEEISRVLKPGGT 90 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~---~~L~ei~RvLKPGG~ 90 (299)
..++..|+++.|++.|++++... ..++.++.+|+..+|++ ++||+|++..+++|++ .. .++++++|+|||||+
T Consensus 144 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 222 (305)
T 3ocj_A 144 VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGA 222 (305)
T ss_dssp CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeE
Confidence 35567788999999999876543 33599999999999988 9999999999899886 43 379999999999999
Q ss_pred EEEEecCCCCc----c-----chH----------------------HHHHHHHHHHHHCCceeceeec
Q 022285 91 ILIYKKLTSDK----G-----DVD----------------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 91 l~i~~~~~~~~----g-----~~~----------------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
|++.+...... . ... ...+++...|..+||..+....
T Consensus 223 l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 223 LVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp EEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 99987543210 0 000 1245788899999999876553
No 23
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.86 E-value=4.3e-09 Score=93.19 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=75.7
Q ss_pred cccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 5 ~~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
+.+.+||-|-.|+ .++..|+++.|++.|++++.....++.+..+|++.+|+++++||+|++..++||+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhc
Confidence 3456788775443 3456688899999998876444678999999999999999999999999999999
Q ss_pred C-hHHHHHHHHHhccCCcEEEEE
Q 022285 73 P-GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~ 94 (299)
+ ...++.+++|+|||||.|++.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE
Confidence 7 788999999999999999887
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.86 E-value=4.6e-09 Score=96.67 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=93.9
Q ss_pred cccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
+.+.+||-|--| ..++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++..++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 345677776443 34556688899999998876553 357999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhccCCcEEEEEecCCCCcc-c---h----HH-------HHHHHHHHHHHCCceeceeec
Q 022285 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKG-D---V----DK-------AISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g-~---~----~~-------~~~~l~~~L~laGFv~v~~~~ 127 (299)
++++...++++++|+|||||+|++.++...... . . .. ..+++...+..+||..+....
T Consensus 196 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 196 MYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp GGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 988888999999999999999999876432210 1 0 10 135677889999999776543
No 25
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.85 E-value=4.7e-09 Score=87.29 Aligned_cols=120 Identities=19% Similarity=0.209 Sum_probs=85.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEec
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.++..|+++.|++.++++ .+++.+..+| +|+++++||+|++..++++++ ...++++++|+|||||++++.++
T Consensus 41 ~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 41 KLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp EEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 345667888899888765 5689999988 788899999999999999887 78899999999999999999987
Q ss_pred CCCCc--cch-H--HHHHHHHHHHHHCCceeceeecccccCccceeeeeeeecCCCCCcCC
Q 022285 97 LTSDK--GDV-D--KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKIGS 152 (299)
Q Consensus 97 ~~~~~--g~~-~--~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~a~KP~~~~gs 152 (299)
..... +.. . ...+++...+. ||..++.....+. .+.+.+.++.-..++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~------~~~l~~~~~~~~~~~ 166 (170)
T 3i9f_A 114 RKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPY------HFGLVLKRKTSEGHH 166 (170)
T ss_dssp CSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTT------EEEEEEEECCCCSCC
T ss_pred CccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCc------eEEEEEecCCCCccc
Confidence 54321 110 0 11345666666 9998876553321 344555554444443
No 26
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.84 E-value=8.3e-09 Score=90.09 Aligned_cols=88 Identities=13% Similarity=0.101 Sum_probs=71.5
Q ss_pred cceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecC-ccCCCC
Q 022285 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP 73 (299)
Q Consensus 7 ~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~-~~~~~~ 73 (299)
+.+||-|-.|+ .++..|+++.|++.|+++......++.+..+|+..++++ ++||+|++.. +++|++
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~ 116 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYII 116 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCC
T ss_pred CCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccC
Confidence 45677774433 455668889999999887655444899999999999987 8999999998 888883
Q ss_pred ----hHHHHHHHHHhccCCcEEEEEe
Q 022285 74 ----GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 74 ----~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
...++++++|+|||||.|++..
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 117 DSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 5789999999999999999854
No 27
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.83 E-value=8.9e-09 Score=89.28 Aligned_cols=123 Identities=15% Similarity=0.078 Sum_probs=92.1
Q ss_pred cccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcC------CCeEEEeccCCCCCCCCCceeEEEec
Q 022285 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCD------PQIITQASSLSQLPVESFSIDTVLSI 66 (299)
Q Consensus 5 ~~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~------~~i~~~~gd~~~Lp~~~~sfD~Vls~ 66 (299)
+.+.+||-|-.|+ .++..|+++.|++.+++++.... .++.+..+++..+|+++++||+|++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 3456777775543 45567888999999987664432 26899999999999999999999999
Q ss_pred CccCCCC-hH---HHHHHHHHhccCCcEEEEEecCCCCccch-H--------------------------------HHHH
Q 022285 67 SSSHELP-GD---QLLEEISRVLKPGGTILIYKKLTSDKGDV-D--------------------------------KAIS 109 (299)
Q Consensus 67 ~~~~~~~-~~---~~L~ei~RvLKPGG~l~i~~~~~~~~g~~-~--------------------------------~~~~ 109 (299)
.++++++ +. .++++++|+|||||+|++.++........ . ...+
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEK 188 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHH
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHH
Confidence 9999886 55 79999999999999999987643211100 0 0235
Q ss_pred HHHHHHHHCCceeceeec
Q 022285 110 ALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 110 ~l~~~L~laGFv~v~~~~ 127 (299)
++...|..+||..+....
T Consensus 189 ~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 189 ELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp HHHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHHcCCEEEEEEe
Confidence 777888999999876543
No 28
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.81 E-value=3.6e-09 Score=92.60 Aligned_cols=89 Identities=16% Similarity=0.154 Sum_probs=73.4
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-|-.|+ .++..|+++.|++.|+++... .++.++.+|+..+++++++||+|++..+++++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 355677764432 566778889999998875433 47999999999999989999999999999888
Q ss_pred C-hHHHHHHHHHhccCCcEEEEEec
Q 022285 73 P-GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+ ...++++++|+|||||+|++..+
T Consensus 121 ~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 121 EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 7 78899999999999999998764
No 29
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.81 E-value=9e-09 Score=92.32 Aligned_cols=110 Identities=20% Similarity=0.214 Sum_probs=84.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~ 94 (299)
..++..|+++.|++.|++++... ..++.+..+|+..+|+++++||+|++..++++++ +..++++++|+|||||.|++.
T Consensus 62 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 62 AEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 34556788899999998876543 4589999999999999999999999999999987 778999999999999999998
Q ss_pred ecCCCCc-----c-chHHH-----------------HHHHHHHHHHCCceeceee
Q 022285 95 KKLTSDK-----G-DVDKA-----------------ISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 95 ~~~~~~~-----g-~~~~~-----------------~~~l~~~L~laGFv~v~~~ 126 (299)
++..... . ..... ...+...|..+||..+...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~ 196 (276)
T 3mgg_A 142 EGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVE 196 (276)
T ss_dssp EECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEE
T ss_pred EcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEe
Confidence 7543211 0 00000 1356678899999887643
No 30
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.81 E-value=2.4e-09 Score=94.54 Aligned_cols=120 Identities=9% Similarity=0.063 Sum_probs=90.4
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-|-.|+ .++..|+++.|++.|+++.... .++.++.+|+..+|+++++||+|++..+++|+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 355677774433 2556678899999998766443 68999999999999999999999999999998
Q ss_pred C---hHHHHHHHHHhccCCcEEEEEecCCCCcc--------chHHHHHHHHHHHHHCCceeceee
Q 022285 73 P---GDQLLEEISRVLKPGGTILIYKKLTSDKG--------DVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 73 ~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g--------~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
+ ...++++++|+|||||.|++.++...... ......+.+...|..+||..++..
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 5 47899999999999999999885321100 000123578888999999987654
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=9e-09 Score=92.87 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=73.2
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|--| ..++..|+++.|++.++++. .++.+..+|++.+|+ +++||+|++..+++|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 35577777543 34556688899999987654 678999999999998 57999999999999987
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecCCC
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKLTS 99 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~ 99 (299)
+..++++++|+|||||+|++..+...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 78899999999999999999877543
No 32
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.79 E-value=1e-08 Score=93.10 Aligned_cols=80 Identities=9% Similarity=0.080 Sum_probs=70.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEe
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
..++..|+++.|++.|++++.....++.+.++|+..+|++ ++||+|++..++++++ ...++++++|+|||||.|++.+
T Consensus 48 ~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 48 SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 4566788999999999987765556899999999999984 6999999999999887 7889999999999999999988
Q ss_pred cC
Q 022285 96 KL 97 (299)
Q Consensus 96 ~~ 97 (299)
+.
T Consensus 127 ~~ 128 (284)
T 3gu3_A 127 PH 128 (284)
T ss_dssp CC
T ss_pred cc
Confidence 65
No 33
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.79 E-value=5.9e-09 Score=95.09 Aligned_cols=103 Identities=17% Similarity=-0.008 Sum_probs=75.6
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeE--EEeccCCCCC------CCCCceeEEEecCccCCCC-hHHHHHHHHHhccCC
Q 022285 20 PVSAVLNAIRDLGDEAVEQC--DPQII--TQASSLSQLP------VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPG 88 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~i~--~~~gd~~~Lp------~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPG 88 (299)
+..|.+++|++.|++++... ..++. +..++++.++ +++++||+|++.+++||++ +..++++++|+||||
T Consensus 86 ~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg 165 (292)
T 2aot_A 86 EVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN 165 (292)
T ss_dssp EEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE
T ss_pred EEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCC
Confidence 66788999999998876432 23444 4566665553 6789999999999999998 788999999999999
Q ss_pred cEEEEEecCCCCccchHH------------------HHHHHHHHHHHCCceece
Q 022285 89 GTILIYKKLTSDKGDVDK------------------AISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 89 G~l~i~~~~~~~~g~~~~------------------~~~~l~~~L~laGFv~v~ 124 (299)
|+|++....... .+.. ...++...|..+||..+.
T Consensus 166 G~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 166 AKMLIIVVSGSS--GWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp EEEEEEEECTTS--HHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEE
T ss_pred cEEEEEEecCCc--cHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceEE
Confidence 999988654321 1111 124667788889987654
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.76 E-value=1e-08 Score=90.40 Aligned_cols=116 Identities=15% Similarity=0.007 Sum_probs=87.1
Q ss_pred cccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC--CCCCCceeEEEecCccC
Q 022285 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSH 70 (299)
Q Consensus 5 ~~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~ 70 (299)
+.+.+||-|--|. .++..|+++.|++.++++ +.++.+|+..+ |+++++||+|++..+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVE 112 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence 4456788775443 455667788888877653 77888888876 88999999999999999
Q ss_pred CCC-h--HHHHHHHHHhccCCcEEEEEecCCCCccchH-----------HHHHHHHHHHHHCCceeceeec
Q 022285 71 ELP-G--DQLLEEISRVLKPGGTILIYKKLTSDKGDVD-----------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 71 ~~~-~--~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~-----------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
|++ + ..++++++|+|||||.|++..+.......+. .....+...+..+||..+....
T Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 113 HLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp GSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred hCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 987 3 6899999999999999999887643211110 0125778889999999876544
No 35
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.76 E-value=5.5e-09 Score=92.18 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=84.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i 93 (299)
.++..|+++.|++.|+++.... ..++.++.+|+..+++++++||+|++..++++++ . ..++++++|+|||||+|++
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4567788999999998876543 4578899999999999888999999999999887 3 3799999999999999999
Q ss_pred EecCCCC-------ccchHHHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSD-------KGDVDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~-------~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.++.... .+.......++...+..+||..+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 184 KDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp EEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred EEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 7753221 001101235788889999999876543
No 36
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.75 E-value=3.9e-09 Score=91.61 Aligned_cols=79 Identities=9% Similarity=0.059 Sum_probs=64.8
Q ss_pred CCccChHHHHHHHHHHHHHHhhh-------------cCCCeEEEeccCCCCCCCC-CceeEEEecCccCCCCh---HHHH
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQ-------------CDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPG---DQLL 78 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~-------------~~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~~~~~---~~~L 78 (299)
+..|+..|+++.|++.|+++... ...++.++++|+.++|+++ ++||+|++..++++++. ..++
T Consensus 44 g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l 123 (203)
T 1pjz_A 44 GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYV 123 (203)
T ss_dssp CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHH
Confidence 44577789999999999876532 2468999999999999876 89999999888888872 4689
Q ss_pred HHHHHhccCCcEEEEE
Q 022285 79 EEISRVLKPGGTILIY 94 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~ 94 (299)
++++|+|||||++++.
T Consensus 124 ~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 124 QHLEALMPQACSGLLI 139 (203)
T ss_dssp HHHHHHSCSEEEEEEE
T ss_pred HHHHHHcCCCcEEEEE
Confidence 9999999999994443
No 37
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.75 E-value=1.3e-08 Score=87.62 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=75.6
Q ss_pred ccceEEEEecCC----------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h
Q 022285 6 MQSAVLALSEDK----------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G 74 (299)
Q Consensus 6 ~~~~vLlL~~~~----------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~ 74 (299)
.+.+||-|-.++ .++..|+++.|++.++++. .++.++.+|+..+|+++++||+|++..+++|++ .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 345677664433 5678899999999988764 678999999999999999999999999999987 7
Q ss_pred HHHHHHHHHhccCCcEEEEEecCC
Q 022285 75 DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 75 ~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
..++++++|+|||||.+++..+..
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEecCC
Confidence 889999999999999999988754
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.73 E-value=1.7e-08 Score=87.01 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=80.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++..|+++.|+..++++. ++.+..+++..++ ++++||+|++..++++++ ...++++++|+|||||+|++.
T Consensus 67 ~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 67 DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4556788899999988764 5677889999998 789999999999999886 468999999999999999998
Q ss_pred ecCCCCccc--h-----HHHHHHHHHHHHHCC-ceeceeec
Q 022285 95 KKLTSDKGD--V-----DKAISALEGKLLLAG-FLDAQRIQ 127 (299)
Q Consensus 95 ~~~~~~~g~--~-----~~~~~~l~~~L~laG-Fv~v~~~~ 127 (299)
......... . ....+.+...+..+| |..+....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 141 YKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp EECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred EcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 664321100 0 012357888999999 99876544
No 39
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.73 E-value=1e-08 Score=92.62 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=84.7
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCC-CCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (299)
..++..|+++.|++.|++++... ..++.++.+|+..++ +.+++||+|++..+++|++ +..++++++|+|||||.|+
T Consensus 91 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~ 170 (285)
T 4htf_A 91 HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLS 170 (285)
T ss_dssp CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEE
Confidence 45567788999999998876543 268999999999998 8889999999999999987 7889999999999999999
Q ss_pred EEecCCCCc-------cchH-------------------HHHHHHHHHHHHCCceeceee
Q 022285 93 IYKKLTSDK-------GDVD-------------------KAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 93 i~~~~~~~~-------g~~~-------------------~~~~~l~~~L~laGFv~v~~~ 126 (299)
+..+..... +.+. ...+++...|..+||..++..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~ 230 (285)
T 4htf_A 171 LMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKT 230 (285)
T ss_dssp EEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeee
Confidence 987532100 0000 012577888999999877543
No 40
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.72 E-value=1.4e-08 Score=91.33 Aligned_cols=121 Identities=17% Similarity=0.172 Sum_probs=83.2
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhcC------------------------------CC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQCD------------------------------PQ 42 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~~------------------------------~~ 42 (299)
.|.+||-|--|+ .|+..|+++.|++.|++++.... .+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 355677664444 25567889999999887543210 12
Q ss_pred eE-EEeccCCCC-CCC---CCceeEEEecCccCCC-C----hHHHHHHHHHhccCCcEEEEEecCCCCc---cc--h---
Q 022285 43 II-TQASSLSQL-PVE---SFSIDTVLSISSSHEL-P----GDQLLEEISRVLKPGGTILIYKKLTSDK---GD--V--- 104 (299)
Q Consensus 43 i~-~~~gd~~~L-p~~---~~sfD~Vls~~~~~~~-~----~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~--~--- 104 (299)
+. ++++|+... |++ ..+||+|++++++|++ + ...++++++|+|||||.|++........ +. +
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 33 788898873 543 6799999999998875 2 3579999999999999999987543210 10 0
Q ss_pred HHHHHHHHHHHHHCCceeceee
Q 022285 105 DKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 105 ~~~~~~l~~~L~laGFv~v~~~ 126 (299)
....+.+...|..+||..++..
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEe
Confidence 0123478888999999876543
No 41
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.71 E-value=4.3e-08 Score=85.28 Aligned_cols=114 Identities=14% Similarity=0.143 Sum_probs=86.8
Q ss_pred cceEEEEecCCcc--------ChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHH
Q 022285 7 QSAVLALSEDKIL--------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQL 77 (299)
Q Consensus 7 ~~~vLlL~~~~~v--------t~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~ 77 (299)
+.+||-|-.|+.. +..|+++.|++.++++ ++.+..+++..+|+++++||+|++..++++++ ...+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERA 121 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHH
Confidence 5678888665443 3446778888888764 68899999999999999999999999999887 7889
Q ss_pred HHHHHHhccCCcEEEEEecCCCCcc-ch-----------H----HHHHHHHHHHHHCCceeceee
Q 022285 78 LEEISRVLKPGGTILIYKKLTSDKG-DV-----------D----KAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 78 L~ei~RvLKPGG~l~i~~~~~~~~g-~~-----------~----~~~~~l~~~L~laGFv~v~~~ 126 (299)
+++++++|||||.+++..+...... .. . ...+.+...|..+||..++..
T Consensus 122 l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 122 LKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp HHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 9999999999999999876532110 00 0 123577888999999876543
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.71 E-value=2.8e-08 Score=85.48 Aligned_cols=106 Identities=17% Similarity=0.067 Sum_probs=78.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC---CCCCC-ceeEEEecCccCCCChHHHHHHHHHhccCCcEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL---PVESF-SIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L---p~~~~-sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (299)
..++..|+++.|++.|+++ .++.+..+++..+ ++... +||+|++..++++-....++++++|+|||||.|+
T Consensus 75 ~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~ 149 (227)
T 3e8s_A 75 IEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALV 149 (227)
T ss_dssp CEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEE
Confidence 3556778889999988765 4677788777766 65555 4999999998883337899999999999999999
Q ss_pred EEecCCCCccc-----------h-------------HHHHHHHHHHHHHCCceeceeec
Q 022285 93 IYKKLTSDKGD-----------V-------------DKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 93 i~~~~~~~~g~-----------~-------------~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
+.++....... + -...+++...|..+||..++...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 150 IQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred EEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 98764321100 0 01346888999999999876543
No 43
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.69 E-value=1.3e-08 Score=87.14 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=67.9
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEEEe
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
++..|+++.|++.|++++.....++.+..+|+..+|+++++||+|++..+++|++ ...++++++|+|||||.+++.+
T Consensus 49 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 49 TYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4455788999999988765555789999999999999999999999998888884 5789999999999999999987
Q ss_pred cC
Q 022285 96 KL 97 (299)
Q Consensus 96 ~~ 97 (299)
+.
T Consensus 129 ~~ 130 (209)
T 2p8j_A 129 LT 130 (209)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 44
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.69 E-value=2.4e-08 Score=91.09 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=70.6
Q ss_pred cCCccChHHHHHHHHHHHHHHhhhc---CCCeEEEeccCCCCCCCC------CceeEEEecCccCCCChHHHHHHHHHhc
Q 022285 15 EDKILPVSAVLNAIRDLGDEAVEQC---DPQIITQASSLSQLPVES------FSIDTVLSISSSHELPGDQLLEEISRVL 85 (299)
Q Consensus 15 ~~~~vt~~dlse~m~~~A~~~~~~~---~~~i~~~~gd~~~Lp~~~------~sfD~Vls~~~~~~~~~~~~L~ei~RvL 85 (299)
....++..|+++.|++.|++++... ..++.++++|++.+++++ ++||+|++..++||+....++++++|+|
T Consensus 60 ~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~L 139 (299)
T 3g5t_A 60 PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANL 139 (299)
T ss_dssp CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhc
Confidence 3455667788899999999876654 679999999999999888 8999999999999998789999999999
Q ss_pred cCCcEEEEEe
Q 022285 86 KPGGTILIYK 95 (299)
Q Consensus 86 KPGG~l~i~~ 95 (299)
||||.|++..
T Consensus 140 kpgG~l~i~~ 149 (299)
T 3g5t_A 140 RKDGTIAIWG 149 (299)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 9999999854
No 45
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.68 E-value=6.1e-08 Score=88.35 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=66.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC----CCeEEEeccCCCCCCCCCceeEEEec-CccCCCC---hHHHHHHHHHhccCC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCD----PQIITQASSLSQLPVESFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPG 88 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~----~~i~~~~gd~~~Lp~~~~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPG 88 (299)
..++..|+++.|++.|++++.... .++.++++|+..+|+ +++||+|++. ..+++++ ...++++++|+||||
T Consensus 105 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 183 (299)
T 3g2m_A 105 WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPG 183 (299)
T ss_dssp CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCC
Confidence 355677889999999998765543 689999999999998 7899998865 4567776 378999999999999
Q ss_pred cEEEEEecC
Q 022285 89 GTILIYKKL 97 (299)
Q Consensus 89 G~l~i~~~~ 97 (299)
|+|++..+.
T Consensus 184 G~l~~~~~~ 192 (299)
T 3g2m_A 184 GKFLLSLAM 192 (299)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEeec
Confidence 999998654
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.65 E-value=1.9e-08 Score=88.17 Aligned_cols=110 Identities=12% Similarity=0.118 Sum_probs=84.2
Q ss_pred CccChHHHHHHHHHHHHHHhhh--cCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTI 91 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~--~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l 91 (299)
..++..|+++.|++.|++++.. ...++.++++|+.+++ ++.+||+|++..++++++ ...++++++|+|||||.|
T Consensus 89 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 167 (235)
T 3lcc_A 89 RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGEL 167 (235)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEE
Confidence 3456778999999999887654 2467999999999987 456999999999999886 467999999999999999
Q ss_pred EEEecCCCCc--cc-hHHHHHHHHHHHHHCCceeceeec
Q 022285 92 LIYKKLTSDK--GD-VDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 92 ~i~~~~~~~~--g~-~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
++........ +. +....+.+...+..+||..+....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 168 ITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp EEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred EEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 9887643211 11 111234788889999999876543
No 47
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.65 E-value=3.6e-08 Score=86.13 Aligned_cols=88 Identities=13% Similarity=0.199 Sum_probs=71.1
Q ss_pred ccceEEEEecCC-----------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecC-ccCCCC
Q 022285 6 MQSAVLALSEDK-----------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~-----------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~-~~~~~~ 73 (299)
.+.+||-|-.|+ .++..|+++.|++.|+++......++.+..+|+..++++ ++||+|++.. +++|+.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 111 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQ 111 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcC
Confidence 356777775544 456678889999999887665557899999999999886 8899999986 777773
Q ss_pred ----hHHHHHHHHHhccCCcEEEEE
Q 022285 74 ----GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 74 ----~~~~L~ei~RvLKPGG~l~i~ 94 (299)
...++++++|+|||||.|++.
T Consensus 112 ~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 112 TEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 467899999999999999874
No 48
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.64 E-value=7.1e-08 Score=85.35 Aligned_cols=109 Identities=19% Similarity=0.185 Sum_probs=78.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC------------------------------CCe-EEEeccCCCCC-CCC---CceeE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD------------------------------PQI-ITQASSLSQLP-VES---FSIDT 62 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~------------------------------~~i-~~~~gd~~~Lp-~~~---~sfD~ 62 (299)
.++..|+++.|++.|++++.... .++ .+..+|+.+++ +++ ++||+
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~ 160 (265)
T 2i62_A 81 EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADC 160 (265)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEE
T ss_pred eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccE
Confidence 34566888999999987654321 027 88999998864 356 89999
Q ss_pred EEecCccC----CCC-hHHHHHHHHHhccCCcEEEEEecCCCCc---cc-----hHHHHHHHHHHHHHCCceeceee
Q 022285 63 VLSISSSH----ELP-GDQLLEEISRVLKPGGTILIYKKLTSDK---GD-----VDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 63 Vls~~~~~----~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~-----~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
|++..+++ +.+ ...++++++|+|||||.|++........ +. .....+.+...|..+||..++..
T Consensus 161 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 161 LLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 99999888 443 5789999999999999999987543211 00 00112477888999999877654
No 49
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.64 E-value=6.9e-08 Score=82.80 Aligned_cols=89 Identities=12% Similarity=0.151 Sum_probs=72.3
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|--| ..++..|+++.|++.+++ ....++.++.+|+..+ +++++||+|++..+++|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh---cCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 34577777544 345566788889888876 2236899999999998 7899999999999999998
Q ss_pred h---HHHHHHHHHhccCCcEEEEEecCC
Q 022285 74 G---DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 74 ~---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
. ..++++++|+|||||.|++.++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 4 789999999999999999987643
No 50
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.63 E-value=3.5e-08 Score=87.93 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=62.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecC-ccCCCC----hHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP----GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~-~~~~~~----~~~~L~ei~RvLKPGG~l~ 92 (299)
.++..|+++.|++.|+++. .++.++++|+..+|+ +++||+|++.. +++|++ ...++++++|+|||||.|+
T Consensus 74 ~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 148 (263)
T 3pfg_A 74 TVEGLELSADMLAIARRRN----PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVV 148 (263)
T ss_dssp EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHhhC----CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 4567788999999988754 378999999999998 78999999997 888885 3578999999999999999
Q ss_pred EEe
Q 022285 93 IYK 95 (299)
Q Consensus 93 i~~ 95 (299)
|..
T Consensus 149 i~~ 151 (263)
T 3pfg_A 149 VEP 151 (263)
T ss_dssp ECC
T ss_pred EEe
Confidence 863
No 51
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.61 E-value=1.2e-08 Score=91.38 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=85.5
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|-.| ..++..|+++.|++.|+++ .++.++++|++.+|+++++||+|++..+++|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 108 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVH-----PQVEWFTGYAENLALPDKSVDGVISILAIHHFS 108 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCC-----TTEEEECCCTTSCCSCTTCBSEEEEESCGGGCS
T ss_pred CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhc-----cCCEEEECchhhCCCCCCCEeEEEEcchHhhcc
Confidence 45677777544 3456678888887766443 289999999999999999999999999998887
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecCCCCcc-----c-hH----------HHHHHHHHHHHHCCceeceee
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKLTSDKG-----D-VD----------KAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~~g-----~-~~----------~~~~~l~~~L~laGFv~v~~~ 126 (299)
...++++++|+|| ||++++.++...... . +. .....+. .|..+||.++...
T Consensus 109 ~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~ 176 (261)
T 3ege_A 109 HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAI 176 (261)
T ss_dssp SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEE
T ss_pred CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEE
Confidence 7889999999999 999988876532110 0 00 0234567 8999999877643
No 52
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.61 E-value=7.3e-08 Score=86.98 Aligned_cols=118 Identities=12% Similarity=0.066 Sum_probs=86.5
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-|--| ..++..|+++.|++.|++++... ..++.+..+|+..+| ++||+|++..+++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 45577776443 34556677889999998876543 458999999998776 7899999999998
Q ss_pred CCC---hHHHHHHHHHhccCCcEEEEEecCCCCccc--------------hH-------------HHHHHHHHHHHHCCc
Q 022285 71 ELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGD--------------VD-------------KAISALEGKLLLAGF 120 (299)
Q Consensus 71 ~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~--------------~~-------------~~~~~l~~~L~laGF 120 (299)
|++ ...++++++|+|||||.|++.++....... .. ...+++...+..+||
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 220 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGF 220 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTC
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCc
Confidence 883 578999999999999999998765321100 00 023466777888999
Q ss_pred eeceee
Q 022285 121 LDAQRI 126 (299)
Q Consensus 121 v~v~~~ 126 (299)
..++..
T Consensus 221 ~~~~~~ 226 (287)
T 1kpg_A 221 TVTRVQ 226 (287)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 877654
No 53
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.61 E-value=1.3e-07 Score=89.17 Aligned_cols=108 Identities=10% Similarity=0.054 Sum_probs=80.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC--CCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL--PVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGT 90 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~ 90 (299)
.++..|+ +.|++.|++++... ..++.++.+|+... |++ ++||+|++..++|+++. ..++++++|+|||||+
T Consensus 205 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (363)
T 3dp7_A 205 EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSK 282 (363)
T ss_dssp EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCE
T ss_pred EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 3445566 78889988776543 25899999999885 576 78999999999998873 4789999999999999
Q ss_pred EEEEecCCCCccchH----------------------HHHHHHHHHHHHCCceeceeec
Q 022285 91 ILIYKKLTSDKGDVD----------------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 91 l~i~~~~~~~~g~~~----------------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
|+|.+.......... ...+++...|..+||..++...
T Consensus 283 l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~ 341 (363)
T 3dp7_A 283 VYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQD 341 (363)
T ss_dssp EEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCC
T ss_pred EEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEe
Confidence 999886533211110 0245777888999999887653
No 54
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.60 E-value=1.5e-08 Score=90.04 Aligned_cols=119 Identities=15% Similarity=0.111 Sum_probs=82.3
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC--CCCCCceeEEEecC---
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSIS--- 67 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L--p~~~~sfD~Vls~~--- 67 (299)
.|.+||-|--| ..+|..|+++.|++.|+++......++.++.++++.+ ++++++||.|+.-.
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 46677776443 3456778999999999988777677888888887654 68899999998532
Q ss_pred --ccCCCC-hHHHHHHHHHhccCCcEEEEEecC------CCCccchHHH-HHHHHHHHHHCCceece
Q 022285 68 --SSHELP-GDQLLEEISRVLKPGGTILIYKKL------TSDKGDVDKA-ISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 68 --~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~------~~~~g~~~~~-~~~l~~~L~laGFv~v~ 124 (299)
..++++ ...+++|++|+|||||+|.+.+.. .......... .......|..+||....
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 233444 578999999999999999876532 1111111111 23445678889998654
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.59 E-value=1e-07 Score=85.76 Aligned_cols=93 Identities=18% Similarity=0.093 Sum_probs=73.7
Q ss_pred cccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCC-CCCceeEEEecCc
Q 022285 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPV-ESFSIDTVLSISS 68 (299)
Q Consensus 5 ~~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~-~~~sfD~Vls~~~ 68 (299)
+.+.+||-|-.|+ .++..|+++.|++.|+++.... ..++.++++|+..+|+ ++++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 3456788775543 3456688899999998876543 2478999999999998 6889999999998
Q ss_pred cCC--CC---hHHHHHHHHHhccCCcEEEEEecC
Q 022285 69 SHE--LP---GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 69 ~~~--~~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+|+ .+ ...++++++|+|||||.|++..+.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 877 33 478999999999999999988654
No 56
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.59 E-value=5.3e-07 Score=78.53 Aligned_cols=113 Identities=17% Similarity=0.243 Sum_probs=82.6
Q ss_pred cccceEEEEecC--------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC-CCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSED--------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~--------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L-p~~~~sfD~Vls~~~~ 69 (299)
+.|.+||-+--| ..++..|+++.|++.|++++.....++.++.+|+..+ ++++++||+|+++..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 456677777666 3456778889999999987765544899999997533 5667899999998665
Q ss_pred CCCC--------------------hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 70 HELP--------------------GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 70 ~~~~--------------------~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
++.. ...++.++.++|||||+|++..+.. ......+...+..+||...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK------EKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC------HHHHHHHHHHHHHTTCEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc------HhHHHHHHHHHHHcCCceE
Confidence 5432 2678999999999999999875432 1223467778899999543
No 57
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.58 E-value=4.8e-08 Score=88.23 Aligned_cols=79 Identities=11% Similarity=-0.001 Sum_probs=65.1
Q ss_pred CCccChHHHHHHHHHHHHHHhhh------------------cCCCeEEEeccCCCCCCCC-CceeEEEecCccCCCC---
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQ------------------CDPQIITQASSLSQLPVES-FSIDTVLSISSSHELP--- 73 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~------------------~~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~~~~--- 73 (299)
+..|+..|+++.|++.|+++... ...++.++++|+..+++++ ++||+|++..++++++
T Consensus 90 G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~ 169 (252)
T 2gb4_A 90 GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGD 169 (252)
T ss_dssp TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGG
T ss_pred CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHH
Confidence 45577889999999999765421 2368999999999999875 8999999988888887
Q ss_pred hHHHHHHHHHhccCCcEEEEE
Q 022285 74 GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~ 94 (299)
...++++++|+|||||+|++.
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEE
Confidence 356899999999999999654
No 58
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.56 E-value=6.3e-08 Score=82.65 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=77.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC-C-hHHHHHHHHHhccCCcEEEEEe
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-P-GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~-~-~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.++..|+++.|++.|+++......++.+..+|+..+++++++||+|++.+. |+. . ...+++++.|+|||||.+++..
T Consensus 53 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 53 EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC-HLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC-CCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh-cCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 456678889999999887655555899999999999999999999999642 332 1 5789999999999999999997
Q ss_pred cCCCCc----c-c----hHHHHHHHHHHHHHCCceeceee
Q 022285 96 KLTSDK----G-D----VDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 96 ~~~~~~----g-~----~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
+..... + . .....+++...+. ||..+...
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 132 FAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp ECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEE
T ss_pred eccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEE
Confidence 654321 1 0 0012345665555 99876543
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.55 E-value=9.7e-08 Score=82.52 Aligned_cols=91 Identities=22% Similarity=0.251 Sum_probs=72.7
Q ss_pred cceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccC--CC
Q 022285 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH--EL 72 (299)
Q Consensus 7 ~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~--~~ 72 (299)
+.+||-|-.|+ .++..|+++.|++.|+++......++.++.+|+..+++++++||+|++..+++ +.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~ 118 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEP 118 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCH
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCH
Confidence 45677775443 45566788999999988765555789999999999999889999999998744 33
Q ss_pred C-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 73 P-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+ ...++++++++|||||.|++.++.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 3 568999999999999999988764
No 60
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.54 E-value=7.8e-08 Score=84.95 Aligned_cols=76 Identities=11% Similarity=0.117 Sum_probs=65.7
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEe
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
..++..|+++.|++.++++ ..++.++.+|++.+| ++++||+|++..++||++ ...++++++|+|||||.|++..
T Consensus 58 ~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 58 NVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp TSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 3455667888899888765 467999999999998 788999999999999997 7889999999999999999987
Q ss_pred cC
Q 022285 96 KL 97 (299)
Q Consensus 96 ~~ 97 (299)
+.
T Consensus 133 ~~ 134 (259)
T 2p35_A 133 PD 134 (259)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 61
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.54 E-value=4.7e-08 Score=88.68 Aligned_cols=111 Identities=17% Similarity=0.214 Sum_probs=77.1
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc-----------------C--------------CCeEEEeccCCC-CCC-----CCC
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQC-----------------D--------------PQIITQASSLSQ-LPV-----ESF 58 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~-----------------~--------------~~i~~~~gd~~~-Lp~-----~~~ 58 (299)
+..++..|+++.|++.|++++... . ..+.++.+|+.. +|+ +++
T Consensus 94 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 173 (289)
T 2g72_A 94 FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPL 173 (289)
T ss_dssp CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCS
T ss_pred CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCC
Confidence 344567788999999988754321 0 014567778887 764 346
Q ss_pred ceeEEEecCccCC----CC-hHHHHHHHHHhccCCcEEEEEecCCCCc---c-----chHHHHHHHHHHHHHCCceecee
Q 022285 59 SIDTVLSISSSHE----LP-GDQLLEEISRVLKPGGTILIYKKLTSDK---G-----DVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 59 sfD~Vls~~~~~~----~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g-----~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
+||+|+++++++| ++ ...++++++|+|||||+|++........ + ......+.+...|..+||..+..
T Consensus 174 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 174 PADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp SEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 7999999999988 43 5789999999999999999875332110 0 00012357888899999987754
Q ss_pred e
Q 022285 126 I 126 (299)
Q Consensus 126 ~ 126 (299)
.
T Consensus 254 ~ 254 (289)
T 2g72_A 254 R 254 (289)
T ss_dssp E
T ss_pred e
Confidence 3
No 62
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.52 E-value=1.9e-07 Score=80.31 Aligned_cols=115 Identities=16% Similarity=0.090 Sum_probs=83.7
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCC--CCCCCCceeEEEecCccCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ--LPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~--Lp~~~~sfD~Vls~~~~~~ 71 (299)
.+.+||-+-.+ ..++..|+++.|++.++++. ..+..+|+.. +|+++++||+|++..+++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 35567776543 34556678888888877543 2678888876 7788899999999999988
Q ss_pred CC-hHHHHHHHHHhccCCcEEEEEecCCCCc----------------cc------hHHHHHHHHHHHHHCCceeceee
Q 022285 72 LP-GDQLLEEISRVLKPGGTILIYKKLTSDK----------------GD------VDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 72 ~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~----------------g~------~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
++ +..++++++++|||||.+++..+..... +. ......++...+..+||..+...
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 87 7889999999999999999987542210 00 00123577888999999876543
No 63
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.52 E-value=2.1e-07 Score=84.84 Aligned_cols=119 Identities=12% Similarity=0.143 Sum_probs=87.8
Q ss_pred cccceEEEEec-------------CCccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSE-------------DKILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~-------------~~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
+.|.+||-|-- +..++..|+++.|++.|++++... ..++.++.+|+..+ +++||+|++..++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchH
Confidence 34567776643 345667788899999998876553 34799999999876 7899999999999
Q ss_pred CCCC-h---------HHHHHHHHHhccCCcEEEEEecCCCCccchH---------------------------HHHHHHH
Q 022285 70 HELP-G---------DQLLEEISRVLKPGGTILIYKKLTSDKGDVD---------------------------KAISALE 112 (299)
Q Consensus 70 ~~~~-~---------~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~---------------------------~~~~~l~ 112 (299)
++++ + ..++++++|+|||||+|++.+.......... ...+.+.
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~ 227 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVD 227 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHH
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHH
Confidence 9884 2 6899999999999999999887543211000 0124667
Q ss_pred HHHHHCCceeceee
Q 022285 113 GKLLLAGFLDAQRI 126 (299)
Q Consensus 113 ~~L~laGFv~v~~~ 126 (299)
..+..+||..+...
T Consensus 228 ~~l~~aGf~~~~~~ 241 (302)
T 3hem_A 228 YYSSNAGWKVERYH 241 (302)
T ss_dssp HHHHHHTCEEEEEE
T ss_pred HHHHhCCcEEEEEE
Confidence 77888999876543
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.52 E-value=4.2e-08 Score=86.43 Aligned_cols=106 Identities=15% Similarity=0.119 Sum_probs=76.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC--CCCCCceeEEEe-cCcc--CCCC---hHHHHHHHHHhccCCc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS-ISSS--HELP---GDQLLEEISRVLKPGG 89 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L--p~~~~sfD~Vls-~~~~--~~~~---~~~~L~ei~RvLKPGG 89 (299)
.++..|+++.|++.|+++......++.++.+|+.++ |+++++||+|++ .+.+ +..+ ...++++++|+|||||
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG 164 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCe
Confidence 456778999999999987766567899999999998 999999999999 5543 1222 2467999999999999
Q ss_pred EEEEEecCC------CCccchHHHH-HHHHHHHHHCCceec
Q 022285 90 TILIYKKLT------SDKGDVDKAI-SALEGKLLLAGFLDA 123 (299)
Q Consensus 90 ~l~i~~~~~------~~~g~~~~~~-~~l~~~L~laGFv~v 123 (299)
+|++.+... .....+...+ +.....|..+||...
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~ 205 (236)
T 1zx0_A 165 VLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp EEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCGG
T ss_pred EEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCCC
Confidence 999876431 0111111111 234457889999853
No 65
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.51 E-value=3.8e-07 Score=81.97 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=87.6
Q ss_pred ccccceEEEEecCCccC---------------hHHHHHHHHHHHHHHhhhcCCCeEEEeccCC---CCCCCCCceeEEEe
Q 022285 4 GKMQSAVLALSEDKILP---------------VSAVLNAIRDLGDEAVEQCDPQIITQASSLS---QLPVESFSIDTVLS 65 (299)
Q Consensus 4 ~~~~~~vLlL~~~~~vt---------------~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~---~Lp~~~~sfD~Vls 65 (299)
.|.|++||-|-.++-.+ ..|+++.|++.+++++.+ ..|+..+.++.. ..++..+++|+|++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-RRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-CTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-hcCeeEEEEeccCccccccccceEEEEEE
Confidence 46789999997766544 235668899988876544 468888887664 45777889999987
Q ss_pred cCccCCCChHHHHHHHHHhccCCcEEEEEecCCCC--ccchHHHHHHHHHHHHHCCceeceeeccccc
Q 022285 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD--KGDVDKAISALEGKLLLAGFLDAQRIQLKSV 131 (299)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~--~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~ 131 (299)
....++ ....++.+++|+|||||+++|....... ..++....++....|..+||..++.....|.
T Consensus 154 d~~~~~-~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf 220 (233)
T 4df3_A 154 DVAQPE-QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPF 220 (233)
T ss_dssp CCCCTT-HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred eccCCh-hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 653332 2567899999999999999987543221 0111223445567789999998776655553
No 66
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.51 E-value=2.3e-07 Score=85.93 Aligned_cols=106 Identities=12% Similarity=0.147 Sum_probs=79.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i 93 (299)
++..|+ +.|++.|++++... ..++.++.+|+. .|++. .||+|++.+++|+++. ..++++++|+|||||+|+|
T Consensus 196 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 196 GTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 344577 78888888766543 468999999996 46655 8999999999998883 6899999999999999999
Q ss_pred EecCCCCccc---hH-----------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~---~~-----------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+........ .+ ...+++...+..+||..++...
T Consensus 273 ~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 273 IEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp EECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 9875332111 00 1135788889999999887654
No 67
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.51 E-value=1.7e-07 Score=85.98 Aligned_cols=118 Identities=8% Similarity=0.090 Sum_probs=87.8
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.|.+||-|--| ..++..|+++.|++.|++++... ..++.+..+|+..+| ++||+|++..+++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 45677777443 34566788899999998876543 357999999998875 7899999999999
Q ss_pred CCC---hHHHHHHHHHhccCCcEEEEEecCCCCccch---------------H------------HHHHHHHHHHHHCCc
Q 022285 71 ELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDV---------------D------------KAISALEGKLLLAGF 120 (299)
Q Consensus 71 ~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~---------------~------------~~~~~l~~~L~laGF 120 (299)
+++ ...++++++|+|||||+|++.++........ . ...+++...+..+||
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 246 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGF 246 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCC
Confidence 884 5789999999999999999988764321110 0 013467777888999
Q ss_pred eeceee
Q 022285 121 LDAQRI 126 (299)
Q Consensus 121 v~v~~~ 126 (299)
..+...
T Consensus 247 ~~~~~~ 252 (318)
T 2fk8_A 247 TVPEPL 252 (318)
T ss_dssp BCCCCE
T ss_pred EEEEEE
Confidence 877643
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.51 E-value=4.5e-07 Score=75.84 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=84.0
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEec-CccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSI-SSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~-~~~~~~ 72 (299)
.+.+||-+-.+. .++..|+++.|++.++++. .++.+..+|+..+++++++||+|++. ..++++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGGGS
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHhhc
Confidence 455777775443 4556677788888887654 46889999999999988999999998 566776
Q ss_pred C---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 73 P---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 73 ~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
+ ...++.+++++|+|||.+++........ ....+...+..+||..+..
T Consensus 122 ~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~-----~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 122 AEDGREPALANIHRALGADGRAVIGFGAGRGW-----VFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC-----CHHHHHHHHHHHTEEEEEE
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc-----CHHHHHHHHHHcCCEEeee
Confidence 5 3689999999999999999887643211 1236778889999987654
No 69
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.49 E-value=4e-07 Score=79.20 Aligned_cols=86 Identities=13% Similarity=0.168 Sum_probs=67.5
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecC-ccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~-~~~~~ 72 (299)
.+.+||-|--|+ .++..|+++.|++.|+++. .++.+..+|+..+++ +++||+|++.+ +++|+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHhhc
Confidence 356778775554 3556677888998887653 568999999999987 78999999654 77777
Q ss_pred C----hHHHHHHHHHhccCCcEEEEEec
Q 022285 73 P----GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 73 ~----~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+ ...++++++++|||||.|++.++
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4 36799999999999999998753
No 70
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.47 E-value=3.8e-07 Score=78.62 Aligned_cols=80 Identities=23% Similarity=0.254 Sum_probs=65.7
Q ss_pred CeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCce
Q 022285 42 QIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 42 ~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (299)
++.+..+|+..+|+++++||+|++..++|+.....++++++|+|+|||.+++.++.... . ....+...+..+||.
T Consensus 98 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~-~----~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 98 DPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRF-E----DVRTFLRAVTKLGFK 172 (215)
T ss_dssp STTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGC-S----CHHHHHHHHHHTTEE
T ss_pred CceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCC-C----CHHHHHHHHHHCCCE
Confidence 67889999999999999999999999888644788999999999999999998764311 1 223677889999998
Q ss_pred eceee
Q 022285 122 DAQRI 126 (299)
Q Consensus 122 ~v~~~ 126 (299)
.+...
T Consensus 173 ~~~~~ 177 (215)
T 2zfu_A 173 IVSKD 177 (215)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87643
No 71
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.46 E-value=1.6e-07 Score=80.88 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=66.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h---HHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G---DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~---~~~L~ei~RvLKPGG~l~i 93 (299)
.++..|+++.|++.|+++... ..++.++++|+.+++ ++++||+|++..+++|++ + ..++++++|+|||||.|++
T Consensus 75 ~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 75 RLTVIDVMPRAIGRACQRTKR-WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp EEEEEESCHHHHHHHHHHTTT-CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhccc-CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 455778899999999887644 458999999999998 688999999999999988 4 4679999999999999999
Q ss_pred EecC
Q 022285 94 YKKL 97 (299)
Q Consensus 94 ~~~~ 97 (299)
..+.
T Consensus 153 ~~~~ 156 (216)
T 3ofk_A 153 GSAR 156 (216)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7754
No 72
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.46 E-value=1.1e-07 Score=88.46 Aligned_cols=89 Identities=9% Similarity=0.109 Sum_probs=70.9
Q ss_pred ccccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCc
Q 022285 4 GKMQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS 68 (299)
Q Consensus 4 ~~~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~ 68 (299)
.+.|++||.|-.|+ .|+..|++++|++.|+++++.. ..++.++++|+..+| +++||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC
Confidence 35677888886653 3445688999999999876543 378999999999876 789999998653
Q ss_pred cCCCC-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 69 SHELP-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 69 ~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.+ ...++++++|+|||||+|++.+..
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 33 678999999999999999998753
No 73
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.46 E-value=1.7e-07 Score=79.23 Aligned_cols=90 Identities=19% Similarity=0.091 Sum_probs=72.2
Q ss_pred cceEEEEecC------------CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 7 QSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 7 ~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
+.+||-|-.| ..++..|+++.|++.+++++... ..++.+..+|+..+++ +++||+|++..++++++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~ 111 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLE 111 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSC
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCC
Confidence 4567776443 34566688899999998776543 3479999999999998 88999999999988886
Q ss_pred ---hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 ---GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 ---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
...++++++|+|||||.+++.+..
T Consensus 112 ~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 112 AKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 468999999999999998877643
No 74
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.45 E-value=2.5e-07 Score=85.25 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=81.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~ 92 (299)
.++..|++ .|++.|++++... ..++.++.+|+.+.+++.+ ||+|++..++|+++ ...++++++++|||||+++
T Consensus 191 ~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 191 EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEE
Confidence 34566777 8899988766443 3469999999998887665 99999999999886 2589999999999999999
Q ss_pred EEecCCCCc--cchH-----------------HHHHHHHHHHHHCCceeceeec
Q 022285 93 IYKKLTSDK--GDVD-----------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 93 i~~~~~~~~--g~~~-----------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
|.+...... .... ...+++...+..+||..++...
T Consensus 269 i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 269 VFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp EEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred EEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 998754321 1110 0135677889999999876543
No 75
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.44 E-value=2.3e-07 Score=79.18 Aligned_cols=93 Identities=24% Similarity=0.295 Sum_probs=72.9
Q ss_pred cccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCC
Q 022285 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 5 ~~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~ 71 (299)
+.+.+||-+--|. .++..|+++.|++.|+++... ..++.+..+|+..+++++++||+|++..++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3455677774433 456778889999999876543 46899999999999999999999998765533
Q ss_pred CC----------------hHHHHHHHHHhccCCcEEEEEecCC
Q 022285 72 LP----------------GDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 72 ~~----------------~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
+. ...++++++|+|||||++++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 21 3689999999999999999998754
No 76
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.43 E-value=5.4e-07 Score=85.16 Aligned_cols=106 Identities=13% Similarity=0.195 Sum_probs=79.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChH---HHHHHHHHhccCCcEEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGD---QLLEEISRVLKPGGTILI 93 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~---~~L~ei~RvLKPGG~l~i 93 (299)
++..|+ +.|++.|++++... ..++.++.+|+. .|++. .||+|++..++|+++.. .++++++++|||||+|+|
T Consensus 229 ~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 229 GTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 345567 78888888766443 468999999997 56666 89999999999998832 699999999999999999
Q ss_pred EecCCCCccchH----------------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGDVD----------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~~~----------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+.......... ...+++...+..+||..++...
T Consensus 306 ~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 306 IDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp EEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 886543211110 0135677888999999877644
No 77
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.41 E-value=1.4e-07 Score=87.32 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=62.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCC-------CeEEEeccC------CCC--CCCCCceeEEEecCccCCC----ChHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDP-------QIITQASSL------SQL--PVESFSIDTVLSISSSHEL----PGDQLL 78 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~-------~i~~~~gd~------~~L--p~~~~sfD~Vls~~~~~~~----~~~~~L 78 (299)
.++..|+++.|++.|+++...... ++.+.++++ +++ ++++++||+|++.+++|++ +...++
T Consensus 73 ~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l 152 (302)
T 2vdw_A 73 LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVM 152 (302)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHH
Confidence 466789999999999987654322 266778777 433 4667899999999988874 247899
Q ss_pred HHHHHhccCCcEEEEEecC
Q 022285 79 EEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~ 97 (299)
++++|+|||||.|++..+.
T Consensus 153 ~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 153 NNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCEEEEEeCC
Confidence 9999999999999988763
No 78
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.41 E-value=1.2e-06 Score=75.08 Aligned_cols=99 Identities=10% Similarity=0.027 Sum_probs=75.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
..++..|+++.|++.|++++... ..++.++.+|+.........||+|++....+ ....+++++.|+|||||+|++..
T Consensus 65 ~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 65 GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEEe
Confidence 34556788899999998876543 3689999999966544447899999987654 45689999999999999999876
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 96 KLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
... .....+...+..+|| +++.
T Consensus 143 ~~~-------~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 143 VTL-------DTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp CBH-------HHHHHHHHHHHHTTC-EEEE
T ss_pred ccc-------ccHHHHHHHHHHCCC-ceeE
Confidence 532 233467778999999 5443
No 79
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.41 E-value=1.1e-06 Score=76.21 Aligned_cols=101 Identities=15% Similarity=0.003 Sum_probs=76.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC--CCCCceeEEEecCccCCCC---------hHHHHHHHHHhc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVL 85 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~~~~~~~---------~~~~L~ei~RvL 85 (299)
.++..|+++.|+..|++++... ..++.++.+|+..++ +++++||+|++++...|.. ...++.++.++|
T Consensus 67 ~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 146 (214)
T 1yzh_A 67 NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRIL 146 (214)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHS
T ss_pred CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHc
Confidence 4556688899999998876544 368999999999987 8888999999998755432 257999999999
Q ss_pred cCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 86 KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 86 KPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
||||.|++.... ......+...+..+||..+..
T Consensus 147 kpgG~l~~~~~~-------~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 147 PENGEIHFKTDN-------RGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp CTTCEEEEEESC-------HHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcEEEEEeCC-------HHHHHHHHHHHHHCCCeeeec
Confidence 999999987532 112235566777889986543
No 80
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.38 E-value=4.4e-07 Score=78.43 Aligned_cols=80 Identities=10% Similarity=0.057 Sum_probs=67.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-C-----CCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-D-----PQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKP 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~-----~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKP 87 (299)
..++..|+++.|++.|++++... . .++.++.+|+..+++++++||+|++..++++++ + ..++++++|+|||
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 133 (217)
T 3jwh_A 54 EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQP 133 (217)
T ss_dssp SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCC
Confidence 35677889999999998876432 1 279999999998888889999999999999988 3 6899999999999
Q ss_pred CcEEEEEec
Q 022285 88 GGTILIYKK 96 (299)
Q Consensus 88 GG~l~i~~~ 96 (299)
||.+++...
T Consensus 134 gG~li~~~~ 142 (217)
T 3jwh_A 134 KIVIVTTPN 142 (217)
T ss_dssp SEEEEEEEB
T ss_pred CEEEEEccC
Confidence 997776644
No 81
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.37 E-value=4.3e-07 Score=78.47 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=66.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-C-----CCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-D-----PQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKP 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~-----~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKP 87 (299)
..++..|+++.|++.|++++... . .++.+..+|+..+++++++||+|++..++++++ + ..++++++|+|||
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp 133 (219)
T 3jwg_A 54 EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRP 133 (219)
T ss_dssp CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCC
Confidence 46677889999999998875432 1 289999999999998889999999999999988 3 5899999999999
Q ss_pred CcEEEEEec
Q 022285 88 GGTILIYKK 96 (299)
Q Consensus 88 GG~l~i~~~ 96 (299)
||.+++...
T Consensus 134 gG~~i~~~~ 142 (219)
T 3jwg_A 134 QTVIVSTPN 142 (219)
T ss_dssp SEEEEEEEB
T ss_pred CEEEEEccc
Confidence 997766543
No 82
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.35 E-value=9.7e-07 Score=77.02 Aligned_cols=100 Identities=12% Similarity=0.021 Sum_probs=74.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC--CCCCceeEEEecCccCCCC---------hHHHHHHHHHhc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVL 85 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~~~~~~~---------~~~~L~ei~RvL 85 (299)
.++..|+++.|+..|++++... ..++.++.+|+..++ +++++||.|++.+...|.. ...++++++|+|
T Consensus 64 ~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~L 143 (213)
T 2fca_A 64 NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVM 143 (213)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHH
T ss_pred CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHc
Confidence 4556788899999998877554 468999999999887 7889999999887654432 257899999999
Q ss_pred cCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 86 KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 86 KPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
||||.|++..... .....+...+..+||....
T Consensus 144 kpgG~l~~~td~~-------~~~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 144 GKGGSIHFKTDNR-------GLFEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp TTSCEEEEEESCH-------HHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEEeCCH-------HHHHHHHHHHHHCCCcccc
Confidence 9999999875321 1122445566777987543
No 83
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.35 E-value=7e-07 Score=83.17 Aligned_cols=119 Identities=16% Similarity=0.207 Sum_probs=82.8
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCC-CCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEE
Q 022285 20 PVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i 93 (299)
+..|+ +.|+..|++++... ..++.++.+|+...+ +....||+|++..++|+++. ..++++++++|||||+|+|
T Consensus 207 ~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 207 QIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp EEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34455 56777777665442 357999999998876 13456999999999998883 6899999999999999999
Q ss_pred EecCCCCc--cchH-----------------HHHHHHHHHHHHCCceeceeecccccCccceeeeeeeecCCC
Q 022285 94 YKKLTSDK--GDVD-----------------KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (299)
Q Consensus 94 ~~~~~~~~--g~~~-----------------~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~a~KP~ 147 (299)
.+...... .... ...+++...+..+||..++... . . ...+.++||+
T Consensus 286 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~-g-----~--~~l~~a~kp~ 350 (352)
T 3mcz_A 286 LTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERSI-G-----R--YTLLIGQRSS 350 (352)
T ss_dssp EEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEEE-T-----T--EEEEEEECCC
T ss_pred EEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeecc-C-----c--eEEEEEecCC
Confidence 88643221 1110 0135678889999999876321 1 1 1236677774
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.34 E-value=4.8e-07 Score=77.55 Aligned_cols=119 Identities=11% Similarity=-0.002 Sum_probs=81.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.++..|+++.|++.|++++... ..++.+..+|+... .+++||+|++....++ ...++++++|+|||||++++...
T Consensus 85 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 85 SVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAEI--LLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHHH--HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHHH--HHHHHHHHHHhcCCCCEEEEEec
Confidence 4567788999999998876543 33499999998764 4689999999876654 35789999999999999999765
Q ss_pred CCCCccchHHHHHHHHHHHHHCCceeceeecccccCccceeeeeeeecCCCCCcCCc
Q 022285 97 LTSDKGDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKIGSS 153 (299)
Q Consensus 97 ~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~a~KP~~~~gs~ 153 (299)
... ....+...+..+||..+..... ..+ ...+..++|..+.+++
T Consensus 161 ~~~-------~~~~~~~~~~~~Gf~~~~~~~~-----~~w-~~~~~~~~~~~~~~~~ 204 (205)
T 3grz_A 161 DYL-------QLPKIEQALAENSFQIDLKMRA-----GRW-IGLAISRKHEGHHHHH 204 (205)
T ss_dssp EGG-------GHHHHHHHHHHTTEEEEEEEEE-----TTE-EEEEEEECC-------
T ss_pred Ccc-------cHHHHHHHHHHcCCceEEeecc-----CCE-EEEEEecccccccccC
Confidence 431 1236777889999998764431 222 2235566777766553
No 85
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.33 E-value=5.5e-07 Score=81.21 Aligned_cols=79 Identities=14% Similarity=0.043 Sum_probs=67.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.|++++.....++.+..+|+..+++ +++||+|++..+++|++ ...++++++|+|||||.+++
T Consensus 143 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 143 YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 355677889999999988776554489999999999887 88999999999999886 35899999999999999877
Q ss_pred Eec
Q 022285 94 YKK 96 (299)
Q Consensus 94 ~~~ 96 (299)
...
T Consensus 222 ~~~ 224 (286)
T 3m70_A 222 VAA 224 (286)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 86
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.32 E-value=2.4e-06 Score=75.00 Aligned_cols=117 Identities=19% Similarity=0.190 Sum_probs=79.4
Q ss_pred ccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCC----CCCCCCceeEEEecC
Q 022285 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ----LPVESFSIDTVLSIS 67 (299)
Q Consensus 6 ~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~----Lp~~~~sfD~Vls~~ 67 (299)
.+.+||-|-.|+ .++..|+++.|++.|++++... .++.++.+|+.. +++. .+||+|+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIYE-- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE--
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEEE--
Confidence 456777775543 3445577788999888776543 789999999998 8877 78999993
Q ss_pred ccCCCC-h---HHHHHHHHHhccCCcEEEEEecC-CCCcc-chHHH-HHHHHHHHHHCCceeceeecccc
Q 022285 68 SSHELP-G---DQLLEEISRVLKPGGTILIYKKL-TSDKG-DVDKA-ISALEGKLLLAGFLDAQRIQLKS 130 (299)
Q Consensus 68 ~~~~~~-~---~~~L~ei~RvLKPGG~l~i~~~~-~~~~g-~~~~~-~~~l~~~L~laGFv~v~~~~~kp 130 (299)
+++ + ..++.+++|+|||||.|++.... ....+ ..... ..++. .|..+||..++.....+
T Consensus 150 ---~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 150 ---DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEP 215 (230)
T ss_dssp ---CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTT
T ss_pred ---ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCC
Confidence 323 3 67799999999999999986211 11111 11111 24555 77888998776554433
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.32 E-value=8.3e-07 Score=78.45 Aligned_cols=101 Identities=13% Similarity=-0.004 Sum_probs=75.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCC---CCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~---~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
.++..|+++.|++.|++++... ..++.++.+|++.++++ +++||+|++... .+...++++++++|||||.|++
T Consensus 96 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~---~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 96 HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV---ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC---SCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc---CCHHHHHHHHHHhcCCCCEEEE
Confidence 3445688899999998876554 35799999999988864 679999998762 2367899999999999999988
Q ss_pred EecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 94 YKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 94 ~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
..... .......+...+..+||......
T Consensus 173 ~~g~~-----~~~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 173 LKAAS-----AEEELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp EECC------CHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EeCCC-----chHHHHHHHHHHHHcCCeEeEEE
Confidence 75321 12233456678889999866543
No 88
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.32 E-value=5.5e-07 Score=79.13 Aligned_cols=92 Identities=9% Similarity=0.055 Sum_probs=72.0
Q ss_pred cccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCC-----CceeEEEecC
Q 022285 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSIS 67 (299)
Q Consensus 5 ~~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~-----~sfD~Vls~~ 67 (299)
+.+.+||-|.-|+ .++..|+++.|++.|+++. ...++.++++|+..+++.. ..||+|++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC--cccCceEEECcccccccccccccccCccEEEEcc
Confidence 3455677765543 4556688899999998765 2348999999999876543 3499999999
Q ss_pred ccCCCC---hHHHHHHHHHhccCCcEEEEEecCC
Q 022285 68 SSHELP---GDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 68 ~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
.+|+++ ...++++++|+|||||+|++.++..
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999987 3689999999999999999988754
No 89
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.31 E-value=1.4e-06 Score=81.59 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=76.1
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i 93 (299)
++..|+ +.|++.|++++... ..++.++.+|+.. +++.. ||+|++..++|+++. ..++++++|+|||||+|+|
T Consensus 209 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 209 GTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp EEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 445677 88999998776543 3489999999865 44443 999999999998883 3799999999999999999
Q ss_pred Eec--CCC-Cccc-hH---------------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKK--LTS-DKGD-VD---------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~--~~~-~~g~-~~---------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+. ... .... +. ...+++...|..+||..++...
T Consensus 286 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 286 LDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp EECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred EechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 887 321 1110 00 0235677788999999876554
No 90
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.29 E-value=1.2e-06 Score=80.98 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=77.0
Q ss_pred cChHHHHHHHHHHHHHHhhh--cCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccCCcEEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~--~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i 93 (299)
++..|+ +.|++.|++++.. ...++.++.+|+.. +++ ..||+|++..++|+++ . ..++++++++|||||+|+|
T Consensus 194 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 194 GVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp EEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 445566 6778888776543 24689999999987 666 6799999999998777 3 3899999999999999999
Q ss_pred EecCCCCcc-ch-H---------------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKG-DV-D---------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g-~~-~---------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+......+ .. . ...+++...+..+||..++...
T Consensus 271 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 271 IERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp EECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 986532111 11 0 0135677788899998776543
No 91
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.28 E-value=4.1e-06 Score=78.79 Aligned_cols=115 Identities=23% Similarity=0.259 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhh-cCCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEEEecCCCC-
Q 022285 26 NAIRDLGDEAVEQ-CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSD- 100 (299)
Q Consensus 26 e~m~~~A~~~~~~-~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~- 100 (299)
+.+++.|++++.. ...+|+++.+|+-..|++ .+|+|+....+|.++. ..+|++++++|+|||+|+|.+..-..
T Consensus 212 p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~ 289 (353)
T 4a6d_A 212 PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED 289 (353)
T ss_dssp HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT
T ss_pred HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC
Confidence 4567777765533 357899999999776655 4799999999998883 46899999999999999999865321
Q ss_pred -ccchHH----------------HHHHHHHHHHHCCceeceeecccccCccceeeeeeeecCCCC
Q 022285 101 -KGDVDK----------------AISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTW 148 (299)
Q Consensus 101 -~g~~~~----------------~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~a~KP~~ 148 (299)
.++... +.+++...|..+||..++...+... .+ .|.|+|.+.
T Consensus 290 ~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~~-----~~-~i~ArKgt~ 348 (353)
T 4a6d_A 290 RRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAI-----YD-AILARKGTH 348 (353)
T ss_dssp SCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSSS-----CE-EEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCCc-----eE-EEEEEecCc
Confidence 122111 2357888999999998876553221 12 266777654
No 92
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.28 E-value=2.1e-06 Score=80.35 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=78.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~ 92 (299)
.++..|+ +.|++.|++++... ..++.++.+|+...|+++. |+|++..++|+++ ...++++++|+|||||+|+
T Consensus 216 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 216 DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3445567 77888888776543 3469999999998887654 9999999998887 3678999999999999999
Q ss_pred EEecCCCCc-cc-hH------------------HHHHHHHHHHHHCCceeceeec
Q 022285 93 IYKKLTSDK-GD-VD------------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 93 i~~~~~~~~-g~-~~------------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
|.+...... .. .. ...+++...+..+||..++...
T Consensus 293 i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 293 ILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp EEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred EEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 888542210 00 00 1234677788889998776544
No 93
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.28 E-value=7.3e-06 Score=73.01 Aligned_cols=94 Identities=7% Similarity=-0.013 Sum_probs=68.5
Q ss_pred cccceEEEEecCC---------------ccChHHHHHH------HHHHHHHHhhhc--CCCeEEEecc---CCCCCCCCC
Q 022285 5 KMQSAVLALSEDK---------------ILPVSAVLNA------IRDLGDEAVEQC--DPQIITQASS---LSQLPVESF 58 (299)
Q Consensus 5 ~~~~~vLlL~~~~---------------~vt~~dlse~------m~~~A~~~~~~~--~~~i~~~~gd---~~~Lp~~~~ 58 (299)
+.|.+||-|--|. .++..|+++. |++.|++++... ..++.++.+| ...+|++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 3456777775433 3445555554 788888766543 2579999998 667888899
Q ss_pred ceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEecCC
Q 022285 59 SIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 59 sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
+||+|++...+++++ +..+++.+.++++|||.+++.+...
T Consensus 122 ~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 999999999999887 5556666666666799999987653
No 94
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.26 E-value=1e-06 Score=80.27 Aligned_cols=80 Identities=11% Similarity=0.195 Sum_probs=65.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC-----------CCCCceeEEEecCccCCCC---hHHHHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-----------VESFSIDTVLSISSSHELP---GDQLLEEISR 83 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp-----------~~~~sfD~Vls~~~~~~~~---~~~~L~ei~R 83 (299)
.++..|+++.|++.|++++.. ..++.++.+|+...+ ++.++||+|++..++||++ ...++++++|
T Consensus 106 ~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~ 184 (274)
T 2qe6_A 106 RVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRD 184 (274)
T ss_dssp EEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHH
T ss_pred EEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHH
Confidence 455678889999999987643 468999999997531 3335899999999999987 4789999999
Q ss_pred hccCCcEEEEEecCC
Q 022285 84 VLKPGGTILIYKKLT 98 (299)
Q Consensus 84 vLKPGG~l~i~~~~~ 98 (299)
+|||||+|++.+...
T Consensus 185 ~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 185 ALAPGSYLFMTSLVD 199 (274)
T ss_dssp HSCTTCEEEEEEEBC
T ss_pred hCCCCcEEEEEEecC
Confidence 999999999998765
No 95
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.25 E-value=1.1e-06 Score=76.76 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=77.2
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccC-CCCCCC-CCceeEEEecCccCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSL-SQLPVE-SFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~-~~Lp~~-~~sfD~Vls~~~~~~ 71 (299)
.+.+||-|--| ..++..|+++.|++.++++ .+++.++++|+ +.+|++ +++||+|++..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 35566666443 3556778899999998875 56899999999 689998 89999999872
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 72 LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
....++++++|+|||||.|+...... .. ..+...+..+||.....
T Consensus 120 -~~~~~l~~~~~~LkpgG~l~~~~~~~----~~----~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 -GPTSVILRLPELAAPDAHFLYVGPRL----NV----PEVPERLAAVGWDIVAE 164 (226)
T ss_dssp -CCSGGGGGHHHHEEEEEEEEEEESSS----CC----THHHHHHHHTTCEEEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEeCCcC----CH----HHHHHHHHHCCCeEEEE
Confidence 24567899999999999999332211 11 25677899999997654
No 96
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.24 E-value=4.6e-07 Score=82.87 Aligned_cols=87 Identities=16% Similarity=0.212 Sum_probs=61.5
Q ss_pred CCeEEEeccCCCCC-----CCCCceeEEEecCccCCCC-------hHHHHHHHHHhccCCcEEEEEecCC------CCcc
Q 022285 41 PQIITQASSLSQLP-----VESFSIDTVLSISSSHELP-------GDQLLEEISRVLKPGGTILIYKKLT------SDKG 102 (299)
Q Consensus 41 ~~i~~~~gd~~~Lp-----~~~~sfD~Vls~~~~~~~~-------~~~~L~ei~RvLKPGG~l~i~~~~~------~~~g 102 (299)
.++.|+++|+...+ +.+++||+|++..+++|++ ...++++++|+|||||.|++....- ....
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~ 233 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLT 233 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSC
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhccc
Confidence 48999999998654 6789999999999987762 4679999999999999999864320 0000
Q ss_pred -chHHH-------HHHHHHHHHH--CCceeceeec
Q 022285 103 -DVDKA-------ISALEGKLLL--AGFLDAQRIQ 127 (299)
Q Consensus 103 -~~~~~-------~~~l~~~L~l--aGFv~v~~~~ 127 (299)
..... ..++...|.. +||..++...
T Consensus 234 ~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 234 ETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 11110 2356667777 8998776543
No 97
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.24 E-value=1e-06 Score=74.04 Aligned_cols=93 Identities=14% Similarity=0.026 Sum_probs=67.5
Q ss_pred cccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC-CCCCceeEEEecCccC
Q 022285 5 KMQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP-VESFSIDTVLSISSSH 70 (299)
Q Consensus 5 ~~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~ 70 (299)
+.|.+||-+--| ..++..|+++.|++.|++++... ..++.++.++.+.++ +.+++||+|++.....
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 345677766443 34667789999999999877543 378999998888764 5578999998874322
Q ss_pred C--------CC--hHHHHHHHHHhccCCcEEEEEecC
Q 022285 71 E--------LP--GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 71 ~--------~~--~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+ .+ ...++++++|+|||||+|++..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1 11 346889999999999999988764
No 98
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.21 E-value=1e-06 Score=80.81 Aligned_cols=92 Identities=16% Similarity=0.091 Sum_probs=70.7
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhh--------cCCCeEEEeccCCCCC----CC--CC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQ--------CDPQIITQASSLSQLP----VE--SF 58 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~--------~~~~i~~~~gd~~~Lp----~~--~~ 58 (299)
.+.+||-|--|+ .++..|+++.|++.|+++... ...++.++++|++.++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 345677774432 344567788999999876543 2347899999999886 64 45
Q ss_pred ceeEEEecCccCCC-C----hHHHHHHHHHhccCCcEEEEEecC
Q 022285 59 SIDTVLSISSSHEL-P----GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 59 sfD~Vls~~~~~~~-~----~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+||+|++.+++||+ . ...++.+++|+|||||.|++..+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 99999999999997 2 358999999999999999988764
No 99
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.19 E-value=8e-07 Score=80.17 Aligned_cols=80 Identities=15% Similarity=0.216 Sum_probs=65.8
Q ss_pred CccChHHHHHHHHHHHHHHhhh-----cCCCeEEEeccCCCCC---CCCCceeEEEec-CccCCCC--------hHHHHH
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLP---VESFSIDTVLSI-SSSHELP--------GDQLLE 79 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~-----~~~~i~~~~gd~~~Lp---~~~~sfD~Vls~-~~~~~~~--------~~~~L~ 79 (299)
..++..|+++.|++.|++++.. ...++.+..+++..+| +++++||+|++. .+++|++ ...+++
T Consensus 80 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~ 159 (293)
T 3thr_A 80 FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALK 159 (293)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHH
Confidence 3566778999999999875422 1357888999999988 889999999997 7777764 468999
Q ss_pred HHHHhccCCcEEEEEec
Q 022285 80 EISRVLKPGGTILIYKK 96 (299)
Q Consensus 80 ei~RvLKPGG~l~i~~~ 96 (299)
+++|+|||||.|++..+
T Consensus 160 ~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 160 NIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHTEEEEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEeC
Confidence 99999999999998865
No 100
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.17 E-value=3.7e-06 Score=78.43 Aligned_cols=104 Identities=16% Similarity=0.235 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEEEe
Q 022285 21 VSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~ 95 (299)
..|+ +.|++.|++++... ..++.++.+|+.. +++. .||+|++..++|+++. ..++++++++|||||+|+|.+
T Consensus 212 ~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 212 VLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3455 77888888766443 3489999999865 4444 3999999999998873 479999999999999999998
Q ss_pred cC-CCCcc--chH---------------HHHHHHHHHHHHCCceeceeec
Q 022285 96 KL-TSDKG--DVD---------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 96 ~~-~~~~g--~~~---------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.. ..... .+. ...+++...|..+||..++...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 289 RDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp CCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred EeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 65 21111 111 0135677889999999876554
No 101
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.16 E-value=5.5e-06 Score=74.04 Aligned_cols=103 Identities=11% Similarity=0.081 Sum_probs=75.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCC--CCCCceeEEEecCccCCC---------------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP--VESFSIDTVLSISSSHEL--------------------- 72 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~~~~~~--------------------- 72 (299)
.++..|+.+.|.+.|++++... ..++.++.+|+..++ +++++||+|+++..++..
T Consensus 74 ~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~ 153 (259)
T 3lpm_A 74 KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMC 153 (259)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------H
T ss_pred cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccC
Confidence 5667788999999999876543 347999999999876 568899999997544322
Q ss_pred ChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceeecc
Q 022285 73 PGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQL 128 (299)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~~ 128 (299)
....++.++.++|||||+|++..... . ..++...+...||.......+
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~~~~~~----~----~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANFVHRPE----R----LLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECTT----T----HHHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHccCCcEEEEEEcHH----H----HHHHHHHHHHCCCceEEEEEe
Confidence 02468999999999999999865432 1 125666788889987655443
No 102
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.15 E-value=3.6e-06 Score=75.60 Aligned_cols=102 Identities=16% Similarity=0.057 Sum_probs=75.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCC---CCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~---~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
.++..|.++.|++.|++++... ..++.++.+++++++.. +++||+|++.... +...++.+++++|||||+|++
T Consensus 106 ~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~---~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 106 ELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVA---PLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSC---CHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCcC---CHHHHHHHHHHHcCCCeEEEE
Confidence 4556788999999999877654 45799999999988754 4799999997532 346889999999999999988
Q ss_pred EecCCCCccchHHHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
..... .......+...+...||...+...
T Consensus 183 ~~g~~-----~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 183 MKGPR-----VEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp EECSC-----CHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred EeCCC-----cHHHHHHHHHHHHHcCCeEEEEEE
Confidence 76421 122233566677788998765543
No 103
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.15 E-value=9.2e-06 Score=67.64 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=70.8
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CCC--eEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQ--IITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~--i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-+-.|+ .++..|+++.|++.|++++... ..+ +.+..+|+.. ++++++||+|++...++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIR 130 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCST
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcc
Confidence 455677775443 4556688899999998876543 344 9999999987 45678999999988777
Q ss_pred CC-C-hHHHHHHHHHhccCCcEEEEEecCC
Q 022285 71 EL-P-GDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 71 ~~-~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
+. . ...++++++++|||||.+++..+..
T Consensus 131 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 131 AGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 63 2 5689999999999999999988754
No 104
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.15 E-value=2.5e-07 Score=88.30 Aligned_cols=121 Identities=9% Similarity=0.083 Sum_probs=83.3
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-|--|. .++..|+++.|++.|+++- .......+...+++.+|+++++||+|++..+++|++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~ 185 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKG-IRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP 185 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTT-CCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcC-CCcceeeechhhHhhcccCCCCEEEEEECChHHhcC
Confidence 355777775443 4455688889999887641 001111233456667788889999999999999997
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecCCCC------ccch------HHHHHHHHHHHHHCCceeceeec
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKLTSD------KGDV------DKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~------~g~~------~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
+..++++++|+|||||.|++..+.... ...+ -.....+...+..+||..++...
T Consensus 186 d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 186 YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 789999999999999999998653110 0000 01235788899999998776543
No 105
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.13 E-value=3.4e-06 Score=74.32 Aligned_cols=112 Identities=13% Similarity=0.051 Sum_probs=82.1
Q ss_pred cccceEEEEecC---------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecC
Q 022285 5 KMQSAVLALSED---------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSIS 67 (299)
Q Consensus 5 ~~~~~vLlL~~~---------------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~ 67 (299)
+.+.+||-+-.+ ..++..|+++.|++.|++++... ..++.+..+|+..+++++++||+|++..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL 174 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC
Confidence 345677777443 34455677888999988776543 4689999999999888889999999842
Q ss_pred ccCCCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceeec
Q 022285 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 68 ~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
. .+..++.++.++|||||++++..+.. .....+...+..+||..++...
T Consensus 175 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 175 M----EPWKVLEKAALALKPDRFLVAYLPNI-------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp S----CGGGGHHHHHHHEEEEEEEEEEESCH-------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred c----CHHHHHHHHHHhCCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCceEEEEE
Confidence 1 24578999999999999999987642 1233555667779999876543
No 106
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.13 E-value=1.4e-06 Score=77.70 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=68.0
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccC-CC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH-EL 72 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~-~~ 72 (299)
.+.+||-|--| ..++..|+++.|++.|+++.. .+ +..+|+..+|+++++||+|++...++ +.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~---~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV---KN--VVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC---SC--EEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC---CC--EEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 34567776443 345677889999999987643 12 78899999999999999999987544 43
Q ss_pred C-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 73 P-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+ ...++++++|+|||||.|++..+.
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 4 688999999999999999988764
No 107
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.13 E-value=1.4e-06 Score=79.84 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=64.1
Q ss_pred ccChHHHHHHHHHHHHHHhhh-----------------------c---------CCCeEEEeccCCCCCCC-CCceeEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ-----------------------C---------DPQIITQASSLSQLPVE-SFSIDTVL 64 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-----------------------~---------~~~i~~~~gd~~~Lp~~-~~sfD~Vl 64 (299)
.++..|+++.|++.|++++.. . -.+|.|.++|+...|++ .+.||+|+
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~ 218 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIF 218 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEE
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEE
Confidence 567889999999999986410 0 03699999999987776 57899999
Q ss_pred ecCccCCCCh---HHHHHHHHHhccCCcEEEEE
Q 022285 65 SISSSHELPG---DQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 65 s~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~ 94 (299)
+.++++|+++ ..++++++++|+|||.|++.
T Consensus 219 crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 219 CRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp ECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 9999999883 68999999999999999874
No 108
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.11 E-value=4.6e-06 Score=77.01 Aligned_cols=119 Identities=15% Similarity=0.169 Sum_probs=82.9
Q ss_pred cccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEeccCCCCCC--CCCceeEE
Q 022285 5 KMQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLPV--ESFSIDTV 63 (299)
Q Consensus 5 ~~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~-----~~~~i~~~~gd~~~Lp~--~~~sfD~V 63 (299)
+++.+||.|--|. .++..|+.+.|++.|++++.. ..+++.++.+|+..++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3456788775432 445667888999999876521 25789999999987754 47899999
Q ss_pred EecCccCCCC-----hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 64 LSISSSHELP-----GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 64 ls~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
++....++.+ ...++++++|+|||||.|++.....-. .......+...+..+||..+...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL---DLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT---CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc---chHHHHHHHHHHHhCCCCcEEEE
Confidence 9976554433 168899999999999999987543210 11234567788999999877654
No 109
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.11 E-value=7e-06 Score=76.69 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=65.0
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccCCcEEEEEecCCCCcc-c-hH---------
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILIYKKLTSDKG-D-VD--------- 105 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i~~~~~~~~g-~-~~--------- 105 (299)
..++.++.+|+. .+++ +||+|++..++|+++ . ..++++++|+|||||+|+|.+....... . ..
T Consensus 231 ~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~ 307 (348)
T 3lst_A 231 AGRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLA 307 (348)
T ss_dssp TTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHH
T ss_pred CCCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhh
Confidence 568999999995 4555 899999999999888 3 4899999999999999999886432211 1 10
Q ss_pred ------HHHHHHHHHHHHCCceeceeec
Q 022285 106 ------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 106 ------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
...+++...+..+||..++...
T Consensus 308 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 308 ARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp TTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 0235778889999999877654
No 110
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.11 E-value=2.8e-06 Score=74.78 Aligned_cols=89 Identities=15% Similarity=0.148 Sum_probs=68.9
Q ss_pred cceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCc-cCCCC
Q 022285 7 QSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS-SHELP 73 (299)
Q Consensus 7 ~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~-~~~~~ 73 (299)
+.+||-|--| ..++..|+++.|++.|++++.....++.++++|+..++++ ++||+|++.+. .++++
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~ 120 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFD 120 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCC
Confidence 4567776443 3556778899999999987765556899999999998875 68999998743 44444
Q ss_pred ---hHHHHHHHHHhccCCcEEEEEec
Q 022285 74 ---GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 74 ---~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
...++++++++|||||.|++..+
T Consensus 121 ~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 121 EEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 46799999999999999987643
No 111
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.10 E-value=1.3e-06 Score=76.86 Aligned_cols=78 Identities=9% Similarity=-0.026 Sum_probs=62.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCC-C--CCCCceeEEEecCccCCCCh---------HHHHHHHHHhc
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL-P--VESFSIDTVLSISSSHELPG---------DQLLEEISRVL 85 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~L-p--~~~~sfD~Vls~~~~~~~~~---------~~~L~ei~RvL 85 (299)
++..|+++.|+..|++++... ..++.++.+|+..+ + +++++||.|++++...|... ..++++++|+|
T Consensus 61 v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~L 140 (218)
T 3dxy_A 61 FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKL 140 (218)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHE
T ss_pred EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHc
Confidence 556688999999998876544 46899999999874 4 78999999999876555431 25999999999
Q ss_pred cCCcEEEEEec
Q 022285 86 KPGGTILIYKK 96 (299)
Q Consensus 86 KPGG~l~i~~~ 96 (299)
||||.|++...
T Consensus 141 kpGG~l~i~td 151 (218)
T 3dxy_A 141 QLGGVFHMATD 151 (218)
T ss_dssp EEEEEEEEEES
T ss_pred CCCcEEEEEeC
Confidence 99999998764
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.10 E-value=8.1e-06 Score=67.87 Aligned_cols=109 Identities=16% Similarity=0.125 Sum_probs=78.9
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCC-CceeEEEecCccC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVES-FSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~ 70 (299)
.+.+||-+-.|+ .++..|.++.+++.+++++... ..++.+..+|+.. ++++ .+||+|++...++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchH
Confidence 455777775543 3455677889999988776543 2589999998876 3444 5899999987654
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 71 ELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 71 ~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
+ ...++.+++++|+|||.+++..... .....+...+...|| .++.
T Consensus 112 ~--~~~~l~~~~~~l~~gG~l~~~~~~~-------~~~~~~~~~l~~~g~-~~~~ 156 (192)
T 1l3i_A 112 E--LQEILRIIKDKLKPGGRIIVTAILL-------ETKFEAMECLRDLGF-DVNI 156 (192)
T ss_dssp C--HHHHHHHHHHTEEEEEEEEEEECBH-------HHHHHHHHHHHHTTC-CCEE
T ss_pred H--HHHHHHHHHHhcCCCcEEEEEecCc-------chHHHHHHHHHHCCC-ceEE
Confidence 3 4678999999999999999887532 223466778889999 5443
No 113
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.06 E-value=5e-06 Score=75.04 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=73.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.++..|+++.+++.|++++... ..++.+..+|+.. ++++++||+|++.. -.+..++.++.++|||||++++..
T Consensus 137 ~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~~----~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 137 TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIADI----PDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEECC----SCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEcC----cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 4556677889999998876543 3589999999987 67788999999832 125678999999999999999987
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 96 KLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
+.. .....+...+..+||..++..
T Consensus 212 ~~~-------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 212 PNF-------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp SSH-------HHHHHHHHHSGGGTEEEEEEE
T ss_pred CCH-------HHHHHHHHHHHHCCCeEEEEE
Confidence 542 122355666777999877554
No 114
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.05 E-value=1.8e-05 Score=68.53 Aligned_cols=108 Identities=7% Similarity=-0.046 Sum_probs=77.3
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CC-CeEEEeccCCCCCCCCCceeEEEecCccCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DP-QIITQASSLSQLPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~-~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~ 71 (299)
.+.+||-|--|+ .++..|+++.|++.|+++++.. .. ++.++.+|+.........||+|++....
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 355677664433 4556788899999999876554 34 7999999998843334679999987633
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 72 LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
... ++++++|+|||||+|++..... .....+...+...||....
T Consensus 133 -~~~-~l~~~~~~LkpgG~lv~~~~~~-------~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 133 -SQA-LYDRLWEWLAPGTRIVANAVTL-------ESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp -CHH-HHHHHHHHSCTTCEEEEEECSH-------HHHHHHHHHHHHHCSEEEE
T ss_pred -cHH-HHHHHHHhcCCCcEEEEEecCc-------ccHHHHHHHHHhCCCcEEE
Confidence 445 9999999999999999887542 2233566677888876443
No 115
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.05 E-value=3.3e-06 Score=75.20 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=69.9
Q ss_pred ccChHHHHHHHHHHHHHHhhh-------cCCCeEEEeccCCC-CC--CCCCceeEEEecCccCCCC---------hHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQLL 78 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-------~~~~i~~~~gd~~~-Lp--~~~~sfD~Vls~~~~~~~~---------~~~~L 78 (299)
.++..|+++.|++.|++++.. ...++.++.+|+.. +| +++++||.|++.+...|.. ...++
T Consensus 72 ~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l 151 (235)
T 3ckk_A 72 LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLL 151 (235)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHH
Confidence 455678899999998876532 24689999999987 77 8899999999887654432 14799
Q ss_pred HHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCC-ceec
Q 022285 79 EEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDA 123 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG-Fv~v 123 (299)
++++|+|||||.|++..... .....+...+...| |..+
T Consensus 152 ~~~~~~LkpGG~l~~~td~~-------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 152 AEYAYVLRVGGLVYTITDVL-------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp HHHHHHEEEEEEEEEEESCH-------HHHHHHHHHHHTSTTEEEE
T ss_pred HHHHHHCCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCcccc
Confidence 99999999999999875421 11123444555555 6655
No 116
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.05 E-value=3.5e-06 Score=79.69 Aligned_cols=85 Identities=12% Similarity=0.160 Sum_probs=64.7
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--cch--------H-
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GDV--------D- 105 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~--g~~--------~- 105 (299)
..++.++.+|+.. |+++. |+|++..++|+++. ..+|++++|+|||||+|+|.+...... ... +
T Consensus 245 ~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 321 (368)
T 3reo_A 245 FSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDA 321 (368)
T ss_dssp CTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHH
T ss_pred cCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhH
Confidence 4689999999987 77764 99999999998873 478999999999999999998653211 110 0
Q ss_pred -----------HHHHHHHHHHHHCCceeceeec
Q 022285 106 -----------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 106 -----------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
...+++...|..+||..++...
T Consensus 322 ~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 322 LMLAYNPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp HHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 0135678889999999887654
No 117
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.03 E-value=3.5e-06 Score=79.61 Aligned_cols=85 Identities=18% Similarity=0.198 Sum_probs=64.6
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--cc-h-------H-
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GD-V-------D- 105 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~--g~-~-------~- 105 (299)
..++.++.+|+.. |++.. |+|++.+++|+++. ..+|++++|+|||||+|+|.+...... .. . +
T Consensus 243 ~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 319 (364)
T 3p9c_A 243 FPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDM 319 (364)
T ss_dssp CTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHH
T ss_pred cCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHH
Confidence 4689999999987 88765 99999999998872 478999999999999999998653211 00 0 0
Q ss_pred -----------HHHHHHHHHHHHCCceeceeec
Q 022285 106 -----------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 106 -----------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
...+++...|..+||..++...
T Consensus 320 ~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 320 IMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 0135677889999999877654
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.03 E-value=4.7e-06 Score=79.75 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=73.3
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCC--
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-- 71 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~-- 71 (299)
.+.+||-|--| ..++..|+++.|++.|++++......+.++.+|+...+.++++||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 34567766443 3455678889999999988766555689999999998887789999999988876
Q ss_pred ---CC-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 72 ---LP-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 72 ---~~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.. ...++.++.++|||||.|++....
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 22 468999999999999999987654
No 119
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.03 E-value=1.1e-05 Score=66.86 Aligned_cols=95 Identities=8% Similarity=-0.071 Sum_probs=67.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CC-CeEEEeccCC-CCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DP-QIITQASSLS-QLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~-~i~~~~gd~~-~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++..|+++.|++.|++++... .. ++ ++.+++. .++..+++||+|++...+++ ..++++++++|||||++++.
T Consensus 51 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 51 TAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEE
Confidence 4556788899999998876543 23 67 7778774 44433389999999988776 56899999999999999988
Q ss_pred ecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 95 KKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 95 ~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
.... .....+...+...|+...
T Consensus 127 ~~~~-------~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 127 AVTV-------ESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp ECSH-------HHHHHHHHHHHHHCCEEE
T ss_pred eecc-------ccHHHHHHHHHHcCCeeE
Confidence 7542 122245556667776543
No 120
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.00 E-value=3.6e-06 Score=71.31 Aligned_cols=81 Identities=10% Similarity=0.044 Sum_probs=65.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC--CCCCceeEEEecCccCCC-C-hHHHHHHHHH--hccCCcE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHEL-P-GDQLLEEISR--VLKPGGT 90 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~~~~~~-~-~~~~L~ei~R--vLKPGG~ 90 (299)
.++..|+++.|++.|++++... ..++.++++|+.+++ +++++||+|++...+++. . ...++.++.+ +|||||.
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 69 SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 3567788999999999876553 368999999998764 457899999999887775 3 5789999999 9999999
Q ss_pred EEEEecCC
Q 022285 91 ILIYKKLT 98 (299)
Q Consensus 91 l~i~~~~~ 98 (299)
|++.....
T Consensus 149 l~~~~~~~ 156 (189)
T 3p9n_A 149 AVVERATT 156 (189)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99987653
No 121
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.00 E-value=3.9e-05 Score=66.10 Aligned_cols=107 Identities=16% Similarity=0.130 Sum_probs=70.7
Q ss_pred ccChHHHHHHHHHHHHH----Hhhh-cCCCeEEEeccCCCCCCCCCceeEEEecCcc-----CCCC-hHHHHHHHHHhcc
Q 022285 18 ILPVSAVLNAIRDLGDE----AVEQ-CDPQIITQASSLSQLPVESFSIDTVLSISSS-----HELP-GDQLLEEISRVLK 86 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~----~~~~-~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~-----~~~~-~~~~L~ei~RvLK 86 (299)
.++..|+++.|++.+.+ +... ...++.++++|+.++|+++++ |.|+..+.. |+++ +..++++++|+||
T Consensus 53 ~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 131 (218)
T 3mq2_A 53 LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCR 131 (218)
T ss_dssp EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcC
Confidence 45556777777775322 2222 245899999999999998887 888755421 1333 4789999999999
Q ss_pred CCcEEEEEecCCC------Cc-----cchHHHHHHHHHHHHHCCceecee
Q 022285 87 PGGTILIYKKLTS------DK-----GDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 87 PGG~l~i~~~~~~------~~-----g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
|||+|++...... .. .......+.+...+..+||.....
T Consensus 132 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 132 PGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp EEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 9999998642210 00 011222345778899999987654
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.99 E-value=9.5e-06 Score=73.16 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=72.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC-------------C----------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL-------------P---------- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~-------------~---------- 73 (299)
.++..|+++.|++.|++++... ..++.++.+|+.. ++++++||+|+++..+++. |
T Consensus 135 ~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g 213 (276)
T 2b3t_A 135 EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSG 213 (276)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcH
Confidence 4556688899999999876554 3479999999876 3557799999998544322 1
Q ss_pred ---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 74 ---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 74 ---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
...++.++.++|||||.+++...... ...+...+..+||..+..
T Consensus 214 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 214 MADIVHIIEQSRNALVSGGFLLLEHGWQQ--------GEAVRQAFILAGYHDVET 260 (276)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEECCSSC--------HHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECchH--------HHHHHHHHHHCCCcEEEE
Confidence 25688999999999999998653221 125667788899986653
No 123
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.99 E-value=1.2e-05 Score=71.94 Aligned_cols=99 Identities=15% Similarity=0.179 Sum_probs=72.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc----CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC----DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~----~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
.++..|+++.+++.|++++... ..++.+..+|+..+++++++||+|++... .+..++.++.++|+|||.|++
T Consensus 126 ~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~----~~~~~l~~~~~~L~pgG~l~~ 201 (280)
T 1i9g_A 126 QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDML----APWEVLDAVSRLLVAGGVLMV 201 (280)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEESS----CGGGGHHHHHHHEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECCc----CHHHHHHHHHHhCCCCCEEEE
Confidence 3445567788999988776543 46899999999999888899999998432 245789999999999999999
Q ss_pred EecCCCCccchHHHHHHHHHHHHH-CCceeceeec
Q 022285 94 YKKLTSDKGDVDKAISALEGKLLL-AGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~~~~~~~~l~~~L~l-aGFv~v~~~~ 127 (299)
..+.. . ....+...+.. .||..++..+
T Consensus 202 ~~~~~------~-~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 202 YVATV------T-QLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp EESSH------H-HHHHHHHHHHHHSSBCCCEEEC
T ss_pred EeCCH------H-HHHHHHHHHHhcCCcCCcEEEE
Confidence 87642 1 12234444554 7998776543
No 124
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.99 E-value=3.7e-06 Score=79.31 Aligned_cols=85 Identities=16% Similarity=0.197 Sum_probs=63.2
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hH--HHHHHHHHhccCCcEEEEEecCCCCc--cch----HH----
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKPGGTILIYKKLTSDK--GDV----DK---- 106 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKPGG~l~i~~~~~~~~--g~~----~~---- 106 (299)
.+++.++.+|+.. |++. ||+|++..++|+++ .. .++++++|+|||||+|+|.+...... ... ..
T Consensus 251 ~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 327 (372)
T 1fp1_D 251 LSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDN 327 (372)
T ss_dssp CTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHH
T ss_pred cCCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhH
Confidence 3679999999987 7765 99999999999888 44 89999999999999999987532111 110 00
Q ss_pred -----------HHHHHHHHHHHCCceeceeec
Q 022285 107 -----------AISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 107 -----------~~~~l~~~L~laGFv~v~~~~ 127 (299)
..+++...+..+||..++...
T Consensus 328 ~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 328 LMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 134667778889998776543
No 125
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.99 E-value=1.3e-05 Score=70.83 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=73.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.++..|+++.|++.|+++++.. ..++.+..+|+... +++.+||+|++... .+..++.++.++|||||.+++..
T Consensus 120 ~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~~----~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 120 RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDLP----QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECSS----CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECCC----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 3445577788999998876543 33499999999864 77889999998432 24568999999999999999887
Q ss_pred cCCCCccchHHHHHHHHHHHHHCC--ceeceeec
Q 022285 96 KLTSDKGDVDKAISALEGKLLLAG--FLDAQRIQ 127 (299)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laG--Fv~v~~~~ 127 (299)
+.. ...+.+...+..+| |..++...
T Consensus 195 ~~~-------~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 195 PCS-------NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp SSH-------HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred CCH-------HHHHHHHHHHHHcCCCccccEEEE
Confidence 532 22346677888999 98876554
No 126
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.99 E-value=7e-06 Score=71.90 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=76.2
Q ss_pred ccceEEEEecCCc---------------cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCC---CCCCCCceeEEEecC
Q 022285 6 MQSAVLALSEDKI---------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ---LPVESFSIDTVLSIS 67 (299)
Q Consensus 6 ~~~~vLlL~~~~~---------------vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~---Lp~~~~sfD~Vls~~ 67 (299)
.+.+||-|-.++- ++..|+++.|+..+.+++.. ..++.+..+|+.. +|+.+++||+|++..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-RTNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-CTTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-cCCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 4567777755433 33445666555555444333 3789999999987 566678999999965
Q ss_pred ccCCCC-hHHHHHHHHHhccCCcEEEEEecCCC-Ccc-chHHHHHHHHHHHHHCCceeceeecccc
Q 022285 68 SSHELP-GDQLLEEISRVLKPGGTILIYKKLTS-DKG-DVDKAISALEGKLLLAGFLDAQRIQLKS 130 (299)
Q Consensus 68 ~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~-~~g-~~~~~~~~l~~~L~laGFv~v~~~~~kp 130 (299)
. ... ...++.+++++|||||.|++...... ..+ .....+......|..+||..++.....+
T Consensus 156 ~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 156 A--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEP 219 (233)
T ss_dssp C--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTT
T ss_pred C--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCC
Confidence 4 212 24568899999999999998643210 001 1222222224667888999876554433
No 127
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.99 E-value=1.8e-05 Score=67.02 Aligned_cols=80 Identities=9% Similarity=0.006 Sum_probs=62.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCC-CCCCceeEEEecCccC-----CC-C----hHHHHHHHHHh
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSH-----EL-P----GDQLLEEISRV 84 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~-----~~-~----~~~~L~ei~Rv 84 (299)
.++..|+++.|++.|++++... ..++.++.+|+..++ +.+++||+|++...+. ++ . ...+++++.|+
T Consensus 49 ~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 128 (197)
T 3eey_A 49 RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMEL 128 (197)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHh
Confidence 4556677889999998876553 358999999998886 6678999999876441 11 1 24699999999
Q ss_pred ccCCcEEEEEecC
Q 022285 85 LKPGGTILIYKKL 97 (299)
Q Consensus 85 LKPGG~l~i~~~~ 97 (299)
|||||++++..+.
T Consensus 129 Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 129 LVTGGIITVVIYY 141 (197)
T ss_dssp EEEEEEEEEEECC
T ss_pred CcCCCEEEEEEcc
Confidence 9999999988754
No 128
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.99 E-value=4.4e-06 Score=76.93 Aligned_cols=83 Identities=7% Similarity=0.029 Sum_probs=65.2
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC------CCCCcee-----EEEecCccCCCCh----HHHHH
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP------VESFSID-----TVLSISSSHELPG----DQLLE 79 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp------~~~~sfD-----~Vls~~~~~~~~~----~~~L~ 79 (299)
+..|+..|.++.|+++|+.++... ..++.|+++|+..++ ....+|| .|+++.++||++. ..+++
T Consensus 105 ~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~ 184 (277)
T 3giw_A 105 ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVR 184 (277)
T ss_dssp TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHH
T ss_pred CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHH
Confidence 345666788999999999876543 347999999998862 1145666 5888889999983 47999
Q ss_pred HHHHhccCCcEEEEEecCC
Q 022285 80 EISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 80 ei~RvLKPGG~l~i~~~~~ 98 (299)
+++++|+|||.|++.+...
T Consensus 185 ~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 185 RLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHHTTSCTTCEEEEEEECC
T ss_pred HHHHhCCCCcEEEEEeccC
Confidence 9999999999999998764
No 129
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.95 E-value=4.8e-06 Score=77.85 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hH--HHHHHHHHhccC---CcEEEE
Q 022285 20 PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKP---GGTILI 93 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKP---GG~l~i 93 (299)
+..|+ +.|++.|++ ..++.++.+|+.. +++. ||+|++..++|+++ .. .++++++|+||| ||+|+|
T Consensus 216 ~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 216 IVFDR-PQVVENLSG-----SNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp EEEEC-HHHHTTCCC-----BTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred EEeeC-HHHHhhccc-----CCCcEEEeccccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 34444 556554432 3569999999966 6653 99999999999887 44 899999999999 999999
Q ss_pred EecCCCCccc------hH--------------HHHHHHHHHHHHCCceeceeec
Q 022285 94 YKKLTSDKGD------VD--------------KAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 94 ~~~~~~~~g~------~~--------------~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.+........ .. ...+++...+..+||..++...
T Consensus 287 ~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 287 IDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp EECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred EEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 9864221111 00 0124677788899998776543
No 130
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.94 E-value=8.3e-06 Score=72.63 Aligned_cols=83 Identities=24% Similarity=0.277 Sum_probs=65.5
Q ss_pred ccceEEEEecC--------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCC
Q 022285 6 MQSAVLALSED--------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~--------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~ 71 (299)
.+.+||.+--| ..++..|+++.|++.|+++. .++.+..+|+..+|+++++||+|++....
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 45567776443 34556688888998887643 56889999999999999999999987642
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecCC
Q 022285 72 LPGDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
.++++++|+|||||+|++..+..
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 35899999999999999988765
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.93 E-value=8.9e-06 Score=69.66 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=69.6
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-+-.|+ .++..|+++.|++.|++++... ..++.+..+|+...+.++++||+|++...++++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhh
Confidence 456777775543 4556688899999998876553 458999999999877778899999999888887
Q ss_pred ChHHHHHHHHHhccCCcEEEEEecC
Q 022285 73 PGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+. +++++|||||+|++....
T Consensus 157 ~~-----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 157 PT-----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CT-----HHHHTEEEEEEEEEEECS
T ss_pred hH-----HHHHhcccCcEEEEEEcC
Confidence 74 589999999999987754
No 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.92 E-value=1.3e-05 Score=75.35 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=59.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCC---C-hHHHHHHHHHhccCCcEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHEL---P-GDQLLEEISRVLKPGGTI 91 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~---~-~~~~L~ei~RvLKPGG~l 91 (299)
.++..|++ .|+..|++++... ..++.++.++++.+++++++||+|++....+++ . ...++.++.|+|||||.+
T Consensus 91 ~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 91 KVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp EEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred EEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEE
Confidence 45566777 4888888776543 345999999999999999999999997643322 3 678999999999999998
Q ss_pred EE
Q 022285 92 LI 93 (299)
Q Consensus 92 ~i 93 (299)
+.
T Consensus 170 i~ 171 (349)
T 3q7e_A 170 FP 171 (349)
T ss_dssp ES
T ss_pred cc
Confidence 73
No 133
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.89 E-value=2.2e-05 Score=70.71 Aligned_cols=109 Identities=10% Similarity=0.094 Sum_probs=79.2
Q ss_pred ccceEEEEecCC---------------ccChHHHHHHHHHHHHHHhhhcC--CCeEEEeccCCCCCCCCCceeEEEecCc
Q 022285 6 MQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISS 68 (299)
Q Consensus 6 ~~~~vLlL~~~~---------------~vt~~dlse~m~~~A~~~~~~~~--~~i~~~~gd~~~Lp~~~~sfD~Vls~~~ 68 (299)
.|.+||-+-.++ .++..|+++.+++.|++++.... .++.+..+|+... +++++||+|++...
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDVP 190 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECCS
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECCc
Confidence 356777774433 34455777889999888765432 5799999999876 77789999998432
Q ss_pred cCCCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
.+..++.++.++|+|||.|++..+.. .....+...|..+||..++..
T Consensus 191 ----~~~~~l~~~~~~L~pgG~l~~~~~~~-------~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 191 ----DPWNYIDKCWEALKGGGRFATVCPTT-------NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp ----CGGGTHHHHHHHEEEEEEEEEEESSH-------HHHHHHHHHHHHSSEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCceeEEE
Confidence 14578999999999999999987532 122355667778999877654
No 134
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.89 E-value=2e-05 Score=74.60 Aligned_cols=104 Identities=12% Similarity=0.045 Sum_probs=70.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCC-CCC-CCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQ-LPV-ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~-Lp~-~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++..|+++.|++.|++++... ..++.++.+|+.. +|. .+++||+|++...++......++.+++++|||||++++.
T Consensus 197 ~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~ 276 (373)
T 2qm3_A 197 RIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYF 276 (373)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEE
Confidence 3456688899999999887653 2389999999998 774 457899999987654333468899999999999965333
Q ss_pred ecCCCCccchHHHHHHHHHHHH-HCCceec
Q 022285 95 KKLTSDKGDVDKAISALEGKLL-LAGFLDA 123 (299)
Q Consensus 95 ~~~~~~~g~~~~~~~~l~~~L~-laGFv~v 123 (299)
.... ..+.. ..+..+...+. ..||...
T Consensus 277 ~~~~-~~~~~-~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 277 GITR-RESSL-DKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp EECT-TTCCH-HHHHHHHHHHHHTSCCEEE
T ss_pred EEec-CcCCH-HHHHHHHHHHHHhcCcchh
Confidence 3322 00112 11234555565 6888654
No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.87 E-value=5.5e-05 Score=65.92 Aligned_cols=122 Identities=16% Similarity=0.080 Sum_probs=73.4
Q ss_pred cccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC----CCCCCceeEEEec
Q 022285 5 KMQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL----PVESFSIDTVLSI 66 (299)
Q Consensus 5 ~~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L----p~~~~sfD~Vls~ 66 (299)
+.|.+||-|--|+ .|+..|+++.|++.+.+.+.. ..++.++.+|+... ++. ++||+|++.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 4566788775443 344556677766544443332 35788899988773 555 799999997
Q ss_pred CccCCCChHHHHHHHHHhccCCcEEEEEecCCC--CccchHHHHHHHHHHHHHCCceeceeecccc
Q 022285 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--DKGDVDKAISALEGKLLLAGFLDAQRIQLKS 130 (299)
Q Consensus 67 ~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~--~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp 130 (299)
.. +......++.+++|+|||||+|++...... ...............|..+ |...+.....|
T Consensus 134 ~~-~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p 197 (210)
T 1nt2_A 134 IA-QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMP 197 (210)
T ss_dssp CC-STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTT
T ss_pred cc-ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecCCC
Confidence 42 221134568999999999999998842210 0011222221122336777 98877655444
No 136
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.87 E-value=1.8e-05 Score=74.14 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=65.1
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCc--
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISS-- 68 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~-- 68 (299)
.+.+||-|--|+ .++..|+++ |+..|++++... ..++.++.+|+..+++++++||+|++...
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 355677765443 345567775 888888766443 36899999999999999899999998762
Q ss_pred -cCCCC-hHHHHHHHHHhccCCcEEE
Q 022285 69 -SHELP-GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 69 -~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (299)
+++.. ...++.++.|+|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 33333 5679999999999999997
No 137
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.87 E-value=2.9e-06 Score=82.45 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=61.4
Q ss_pred cChHHHHHHHHHHHHHHhh-------h--c-CCCeEEEeccCCCCCCCC--CceeEEEecCccCCCChHHHHHHHHHhcc
Q 022285 19 LPVSAVLNAIRDLGDEAVE-------Q--C-DPQIITQASSLSQLPVES--FSIDTVLSISSSHELPGDQLLEEISRVLK 86 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~-------~--~-~~~i~~~~gd~~~Lp~~~--~sfD~Vls~~~~~~~~~~~~L~ei~RvLK 86 (299)
++..|+++.|.+.|+.+++ . . ..++.++++|+.++|+++ ..||+|+++..+++-.....|.+++|+||
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK 279 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK 279 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCC
Confidence 5566778888888876432 1 1 268999999999999865 57999999876543336778899999999
Q ss_pred CCcEEEEEecCC
Q 022285 87 PGGTILIYKKLT 98 (299)
Q Consensus 87 PGG~l~i~~~~~ 98 (299)
|||+|++.+...
T Consensus 280 PGGrIVssE~f~ 291 (438)
T 3uwp_A 280 EGGRIVSSKPFA 291 (438)
T ss_dssp TTCEEEESSCSS
T ss_pred CCcEEEEeeccc
Confidence 999999887643
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.85 E-value=2.1e-05 Score=65.93 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=75.6
Q ss_pred cceEEEEecCCc-----------cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC--
Q 022285 7 QSAVLALSEDKI-----------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-- 73 (299)
Q Consensus 7 ~~~vLlL~~~~~-----------vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-- 73 (299)
+.+||-|--|+- ++..|+++.|++. ..++.++++|+.. ++++++||+|+++..+++.+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 456776655443 4455677777665 4578899999987 77779999999998877643
Q ss_pred --------hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 74 --------GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 74 --------~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
...++.++.+.| |||.+++...... ....+...+..+||..+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~-------~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN-------RPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG-------CHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC-------CHHHHHHHHHHCCCcEEEEE
Confidence 247889999999 9999998875431 12367778899999876544
No 139
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.85 E-value=2.1e-05 Score=82.20 Aligned_cols=80 Identities=5% Similarity=0.012 Sum_probs=67.3
Q ss_pred CccChHHHHHHHHHHHHHHhhh-------cCCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhcc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLK 86 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~-------~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLK 86 (299)
..++..|+++.|++.|++++.. ...++.++++|+..+|+++++||+|++..+++|++. ..++++++|+||
T Consensus 747 a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK 826 (950)
T 3htx_A 747 QTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH 826 (950)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC
Confidence 4677889999999999875432 235899999999999999999999999999999983 358999999999
Q ss_pred CCcEEEEEecC
Q 022285 87 PGGTILIYKKL 97 (299)
Q Consensus 87 PGG~l~i~~~~ 97 (299)
|| .++|..+.
T Consensus 827 PG-~LIISTPN 836 (950)
T 3htx_A 827 PK-LLIVSTPN 836 (950)
T ss_dssp CS-EEEEEECB
T ss_pred CC-EEEEEecC
Confidence 99 77777653
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.82 E-value=8.5e-06 Score=70.25 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=62.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC---CCeEEEeccCCCCCC--CCCc-eeEEEecCccCCCChHHHHHHH--HHhccCCc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD---PQIITQASSLSQLPV--ESFS-IDTVLSISSSHELPGDQLLEEI--SRVLKPGG 89 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~---~~i~~~~gd~~~Lp~--~~~s-fD~Vls~~~~~~~~~~~~L~ei--~RvLKPGG 89 (299)
.++..|+++.|++.|++++.... .++.++.+|+..+.. ++++ ||+|++...++.-....++.++ .|+|||||
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG 157 (201)
T 2ift_A 78 KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNA 157 (201)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCc
Confidence 46677889999999998775543 589999999877532 3678 9999998775532256788888 77899999
Q ss_pred EEEEEecCC
Q 022285 90 TILIYKKLT 98 (299)
Q Consensus 90 ~l~i~~~~~ 98 (299)
.|++.....
T Consensus 158 ~l~i~~~~~ 166 (201)
T 2ift_A 158 LIYVETEKD 166 (201)
T ss_dssp EEEEEEESS
T ss_pred EEEEEECCC
Confidence 999876543
No 141
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.82 E-value=2.8e-05 Score=67.51 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=66.5
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-+-.|+ .++..|+++.|++.|+++..... ++.++.+|+......+++||+|++...+++++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 148 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPTLL 148 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHHHH
Confidence 456788876554 34566778899999987765434 89999999987333467999999999888776
Q ss_pred hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.++.++|||||++++....
T Consensus 149 -----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 149 -----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp -----HHHHHTEEEEEEEEEEECS
T ss_pred -----HHHHHHcCCCcEEEEEEcC
Confidence 3689999999999988754
No 142
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.80 E-value=9.1e-06 Score=71.77 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=68.3
Q ss_pred ccChHHHH-HHHHHHH---HHHhhhc-CCCeEEEeccCCCCCCC-CCceeEEEecCccCC------CChHHHHHHHHHhc
Q 022285 18 ILPVSAVL-NAIRDLG---DEAVEQC-DPQIITQASSLSQLPVE-SFSIDTVLSISSSHE------LPGDQLLEEISRVL 85 (299)
Q Consensus 18 ~vt~~dls-e~m~~~A---~~~~~~~-~~~i~~~~gd~~~Lp~~-~~sfD~Vls~~~~~~------~~~~~~L~ei~RvL 85 (299)
.++..|++ +.|++.| ++++... ..++.++.++++.+|.. ...||.|++++...+ .....++++++|+|
T Consensus 50 ~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~L 129 (225)
T 3p2e_A 50 FYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLA 129 (225)
T ss_dssp EEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTE
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhc
Confidence 45667888 7888776 5554433 46899999999999742 255666666543211 11356899999999
Q ss_pred cCCcEEEEEecCCCCcc------------chHHHH-HHHHHHHHHCCceecee
Q 022285 86 KPGGTILIYKKLTSDKG------------DVDKAI-SALEGKLLLAGFLDAQR 125 (299)
Q Consensus 86 KPGG~l~i~~~~~~~~g------------~~~~~~-~~l~~~L~laGFv~v~~ 125 (299)
||||+|++......... ...... .++...+..+||.....
T Consensus 130 kpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 130 KKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp EEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred CCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 99999998332211100 001111 23777889999986654
No 143
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.78 E-value=9.1e-05 Score=64.69 Aligned_cols=110 Identities=8% Similarity=0.051 Sum_probs=77.5
Q ss_pred cccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 5 ~~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
+.|.+||.+-.|+ .++..|+++.+++.|+++.... ..++.+..+|+....+++..||+|++...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-- 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR-- 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc--
Confidence 3567888886543 3456677889999998776543 36899999999886546789999998432
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 71 ELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 71 ~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
.+..++.++.++|||||++++..+.. .....+...+... |.+++..
T Consensus 168 --~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~-f~~~~~~ 213 (248)
T 2yvl_A 168 --EPWHYLEKVHKSLMEGAPVGFLLPTA-------NQVIKLLESIENY-FGNLEVV 213 (248)
T ss_dssp --CGGGGHHHHHHHBCTTCEEEEEESSH-------HHHHHHHHHSTTT-EEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHhh-CCcceEE
Confidence 24578999999999999999887642 1122444445545 8776543
No 144
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.78 E-value=1.7e-05 Score=68.29 Aligned_cols=80 Identities=8% Similarity=-0.045 Sum_probs=62.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC-CCeEEEeccCCC-CCCCCCceeEEEecCccCCCChHHHHHHHHH--hccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISR--VLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~-~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~R--vLKPGG~l~i 93 (299)
.|+..|+++.|++.|++++.... .++.++++|+.. ++..+++||+|++...++.-....+++++.+ +|+|||.|++
T Consensus 79 ~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 79 GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEE
Confidence 56677889999999998775543 589999999876 5767789999999877554335678888865 5999999998
Q ss_pred EecC
Q 022285 94 YKKL 97 (299)
Q Consensus 94 ~~~~ 97 (299)
....
T Consensus 159 ~~~~ 162 (202)
T 2fpo_A 159 ESEV 162 (202)
T ss_dssp EEEG
T ss_pred EECC
Confidence 7653
No 145
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.77 E-value=1.7e-05 Score=71.08 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=79.2
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~ 73 (299)
.+.+||-+--|+ .++..|+++.+++.|++++......+.+..+++... +++.+||+|+++...++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~-- 196 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL-- 196 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH--
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH--
Confidence 456777775443 455667778888888877654322388888888762 55779999998754332
Q ss_pred hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
...++.++.++|||||++++...... ....+...+..+||..++..
T Consensus 197 ~~~~l~~~~~~LkpgG~lils~~~~~-------~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 197 HAALAPRYREALVPGGRALLTGILKD-------RAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEGG-------GHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEeeccC-------CHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999998765421 12367778889999876543
No 146
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.77 E-value=9.4e-07 Score=75.15 Aligned_cols=101 Identities=6% Similarity=-0.060 Sum_probs=55.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCC-----CceeEEEecCccCCCC-h-----------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELP-G----------------- 74 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~-----~sfD~Vls~~~~~~~~-~----------------- 74 (299)
.++..|+++.|++.|++++.....++.++++|+.. ++++ ++||+|+++..+++.. .
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~ 134 (215)
T 4dzr_A 56 SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALD 134 (215)
T ss_dssp EEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC---------------------
T ss_pred eEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCcccccc
Confidence 44566778888888887665433378888888887 6666 8999999975443211 0
Q ss_pred ---------HHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHH--HCCceeceee
Q 022285 75 ---------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLL--LAGFLDAQRI 126 (299)
Q Consensus 75 ---------~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~--laGFv~v~~~ 126 (299)
..++++++++|||||++++.+.... .. ..+...+. .+||..+...
T Consensus 135 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~----~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 135 GGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QA----DEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp ---CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CH----HHHHHHTGGGGGGTEECCEE
T ss_pred CCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cH----HHHHHHHHHhhcCCceEEEE
Confidence 6788999999999999555544321 11 24556677 7899876543
No 147
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.76 E-value=6.7e-05 Score=67.35 Aligned_cols=79 Identities=8% Similarity=0.149 Sum_probs=59.8
Q ss_pred ccChHHHHHHHHHHHHHHhhh---c--CCCeEEEeccCCCC-------CCCCCceeEEEecCccCCC-------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ---C--DPQIITQASSLSQL-------PVESFSIDTVLSISSSHEL------------- 72 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~---~--~~~i~~~~gd~~~L-------p~~~~sfD~Vls~~~~~~~------------- 72 (299)
.++..|+.+.|.+.|++++.. . ..++.++.+|+..+ ++++++||+|+++..++..
T Consensus 62 ~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a 141 (260)
T 2ozv_A 62 EVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEA 141 (260)
T ss_dssp EEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC----------------
T ss_pred eEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHH
Confidence 345667888999999987654 2 23699999999887 3678899999998543322
Q ss_pred ------ChHHHHHHHHHhccCCcEEEEEec
Q 022285 73 ------PGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 73 ------~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
....++.++.++|||||+|++...
T Consensus 142 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 142 HAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp -----CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 146789999999999999988654
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.76 E-value=4.3e-05 Score=65.52 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=65.4
Q ss_pred ccceEEEEecC---------------CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCcc
Q 022285 6 MQSAVLALSED---------------KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (299)
Q Consensus 6 ~~~~vLlL~~~---------------~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~ 69 (299)
.+.+||.+-.| ..++..|.++.|++.|+++.... ..++.+..+|+......+.+||+|++...+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAG 156 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCch
Confidence 45677777544 34556677888999988766543 457999999985432236789999999988
Q ss_pred CCCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 70 HELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
++++ .+++++|||||++++....
T Consensus 157 ~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 157 PKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred HHHH-----HHHHHHcCCCcEEEEEECC
Confidence 8776 4789999999999988754
No 149
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.73 E-value=8.5e-05 Score=67.38 Aligned_cols=100 Identities=8% Similarity=-0.016 Sum_probs=73.8
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
++..|+++.|++.|++++... ..++.++.+|+..++. +.+||+|++.... ....++.+++|+|||||.|++.+.
T Consensus 151 V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~---~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 151 VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV---RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCch---hHHHHHHHHHHHCCCCeEEEEEEe
Confidence 667788999999999876542 3459999999999876 7899999996542 235689999999999999999876
Q ss_pred CCCCccchHHHHHHHHHHHHHCCceec
Q 022285 97 LTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 97 ~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
..... ......+.+...+..+||...
T Consensus 227 ~~~~~-~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 227 VPEKL-MPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp EEGGG-TTTTTHHHHHHHHHHTTCEEE
T ss_pred ecccc-ccccHHHHHHHHHHHcCCeeE
Confidence 53110 001123366778899999754
No 150
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.73 E-value=7.3e-05 Score=61.62 Aligned_cols=104 Identities=5% Similarity=0.061 Sum_probs=77.9
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-+-.|+ .++..|+++.|++.|++++... ..++.+..+|+.. ++++++||+|++... .
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~---~ 110 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT---K 110 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC---S
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc---c
Confidence 345677664433 4556688899999998876543 3579999999987 777889999999876 2
Q ss_pred ChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 73 PGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
....+++++.++ |||.+++..... .....+...+..+||..
T Consensus 111 ~~~~~l~~~~~~--~gG~l~~~~~~~-------~~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 111 NIEKIIEILDKK--KINHIVANTIVL-------ENAAKIINEFESRGYNV 151 (183)
T ss_dssp CHHHHHHHHHHT--TCCEEEEEESCH-------HHHHHHHHHHHHTTCEE
T ss_pred cHHHHHHHHhhC--CCCEEEEEeccc-------ccHHHHHHHHHHcCCeE
Confidence 357889999999 999999987542 22346777889999753
No 151
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.71 E-value=2.6e-05 Score=71.00 Aligned_cols=86 Identities=16% Similarity=0.072 Sum_probs=61.8
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCC-----CCCceeEEEecCc
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-----ESFSIDTVLSISS 68 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~-----~~~sfD~Vls~~~ 68 (299)
.|.+||-|--| ..|+..|+++.|++.|++++.... +.+++..++. .+++||+|++...
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~-----v~~~~~~~~~~~~~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC-----VTIDLLDITAEIPKELAGHFDFVLNDRL 119 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC-----CEEEECCTTSCCCGGGTTCCSEEEEESC
T ss_pred CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc-----ceeeeeecccccccccCCCccEEEEhhh
Confidence 35566666443 456677999999999998764432 2233333332 2578999999998
Q ss_pred cCCCC---hHHHHHHHHHhccCCcEEEEEecC
Q 022285 69 SHELP---GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 69 ~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+||+. ...++++++++| |||+|++....
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 88876 356899999999 99999988654
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.71 E-value=3.2e-05 Score=72.30 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=63.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCC---C---hHHHHHHHHHhccCCcE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL---P---GDQLLEEISRVLKPGGT 90 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~---~---~~~~L~ei~RvLKPGG~ 90 (299)
..++..|+++.|++.|++++......+.+..+|+...+ +++||+|+++..+|+. . ...++++++|+|||||.
T Consensus 221 ~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~ 298 (343)
T 2pjd_A 221 IRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGE 298 (343)
T ss_dssp CBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcE
Confidence 36778889999999999877655455777888886643 7799999999888752 1 46899999999999999
Q ss_pred EEEEecC
Q 022285 91 ILIYKKL 97 (299)
Q Consensus 91 l~i~~~~ 97 (299)
|++....
T Consensus 299 l~i~~~~ 305 (343)
T 2pjd_A 299 LRIVANA 305 (343)
T ss_dssp EEEEEET
T ss_pred EEEEEcC
Confidence 9988754
No 153
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.70 E-value=1.3e-05 Score=66.76 Aligned_cols=81 Identities=14% Similarity=0.001 Sum_probs=61.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC----CCCCCceeEEEecCccCCCChHHHHHHH--HHhccCCc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL----PVESFSIDTVLSISSSHELPGDQLLEEI--SRVLKPGG 89 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L----p~~~~sfD~Vls~~~~~~~~~~~~L~ei--~RvLKPGG 89 (299)
.++..|+++.|++.|++++... ..++.++.+|+.+. ++++++||+|++...++.......+..+ +|+|||||
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG 148 (187)
T 2fhp_A 69 KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEA 148 (187)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCC
Confidence 4567788899999998876543 24799999998763 2337899999998775544456677777 99999999
Q ss_pred EEEEEecCC
Q 022285 90 TILIYKKLT 98 (299)
Q Consensus 90 ~l~i~~~~~ 98 (299)
.+++.....
T Consensus 149 ~l~~~~~~~ 157 (187)
T 2fhp_A 149 VIVCETDKT 157 (187)
T ss_dssp EEEEEEETT
T ss_pred EEEEEeCCc
Confidence 999887654
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.69 E-value=3.7e-05 Score=72.98 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=67.0
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-|--|+ .++..|++ .|++.|++++... ..++.++.+|++.++++ ++||+|++....+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 456777775544 45566778 8888888776543 35699999999999987 8999999966444
Q ss_pred CC---C-hHHHHHHHHHhccCCcEEEEEe
Q 022285 71 EL---P-GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 71 ~~---~-~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.+ . ...++.++.|+|||||.|++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 43 2 5679999999999999997653
No 155
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.68 E-value=4.6e-05 Score=66.34 Aligned_cols=74 Identities=8% Similarity=0.074 Sum_probs=58.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc------CCCeEEEeccCCCCCCCC-CceeEEEecCccCCCChHHHHHHHHHhccCCcE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLPVES-FSIDTVLSISSSHELPGDQLLEEISRVLKPGGT 90 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~------~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~ 90 (299)
.++..|+++.|++.|++++... ..++.+..+|+.. ++++ .+||+|++....++++ .++.+.|||||+
T Consensus 116 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~ 189 (227)
T 1r18_A 116 RIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGR 189 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCE
Confidence 4555667788888888765442 4689999999987 5555 7899999998887765 678999999999
Q ss_pred EEEEecC
Q 022285 91 ILIYKKL 97 (299)
Q Consensus 91 l~i~~~~ 97 (299)
|++....
T Consensus 190 lvi~~~~ 196 (227)
T 1r18_A 190 LIVPVGP 196 (227)
T ss_dssp EEEEESC
T ss_pred EEEEEec
Confidence 9987653
No 156
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.65 E-value=7.5e-05 Score=64.63 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=67.2
Q ss_pred ccccceEEEEecC---------------CccChHHHHHHHHHHHHHHhhhc------CCCeEEEeccCCCCCCCCCceeE
Q 022285 4 GKMQSAVLALSED---------------KILPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLPVESFSIDT 62 (299)
Q Consensus 4 ~~~~~~vLlL~~~---------------~~vt~~dlse~m~~~A~~~~~~~------~~~i~~~~gd~~~Lp~~~~sfD~ 62 (299)
.+.+.+||-+-.+ ..++..|+++.|++.+++++... ..++.+..+|+...+..+.+||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456678877443 24556677888999988766542 35899999999877666789999
Q ss_pred EEecCccCCCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 63 VLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 63 Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
|++....+++. .+++++|||||+|++....
T Consensus 155 i~~~~~~~~~~-----~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP-----QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH-----HHHHHhcCCCcEEEEEEec
Confidence 99988766543 5789999999999987654
No 157
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.65 E-value=3.7e-05 Score=70.94 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=59.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
++..|+++.|++.|++++... ..++.+..+|+...+.++++||+|++...+++++ .++.++|||||++++...
T Consensus 103 v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 103 VVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEEBC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEEEC
Confidence 566677889999998876543 4569999999988665678999999999888876 578899999999998754
No 158
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.65 E-value=6.5e-05 Score=70.29 Aligned_cols=81 Identities=16% Similarity=0.061 Sum_probs=63.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---------hHHHHHHHHHhcc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP---------GDQLLEEISRVLK 86 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---------~~~~L~ei~RvLK 86 (299)
..++..|+.+.|++.|++++... ..++.+.++|+.+++.+...||+|+++..+.+.. ...+++++.|+||
T Consensus 229 ~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lk 308 (354)
T 3tma_A 229 SPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLP 308 (354)
T ss_dssp SCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcC
Confidence 34556677889999999887654 2389999999999998888899999986554321 1578999999999
Q ss_pred CCcEEEEEecC
Q 022285 87 PGGTILIYKKL 97 (299)
Q Consensus 87 PGG~l~i~~~~ 97 (299)
|||++++..+.
T Consensus 309 pgG~l~i~t~~ 319 (354)
T 3tma_A 309 PGGRVALLTLR 319 (354)
T ss_dssp TTCEEEEEESC
T ss_pred CCcEEEEEeCC
Confidence 99999988753
No 159
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.64 E-value=0.00023 Score=61.64 Aligned_cols=120 Identities=18% Similarity=0.105 Sum_probs=74.2
Q ss_pred cccceEEEEecCCc---------------cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC---CCCCceeEEEec
Q 022285 5 KMQSAVLALSEDKI---------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP---VESFSIDTVLSI 66 (299)
Q Consensus 5 ~~~~~vLlL~~~~~---------------vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp---~~~~sfD~Vls~ 66 (299)
+.|.+||-+..|+- ++..|.++.|++.+++++... .++.++.+|+.... ...++||+|++.
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 34667777755443 334466778888877765443 78999999998732 124589999986
Q ss_pred CccCCCC-hHHHHHHHHHhccCCcEEEEEecCCC-Cccc-hHHHH-HHHHHHHHHCCceeceeeccc
Q 022285 67 SSSHELP-GDQLLEEISRVLKPGGTILIYKKLTS-DKGD-VDKAI-SALEGKLLLAGFLDAQRIQLK 129 (299)
Q Consensus 67 ~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~-~~g~-~~~~~-~~l~~~L~laGFv~v~~~~~k 129 (299)
.. ... ...++.+++|+|||||.|++...... ..+. ..... .++. .+..+ |..++.....
T Consensus 151 ~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~-f~~~~~~~~~ 213 (227)
T 1g8a_A 151 VA--QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVER-ELSEY-FEVIERLNLE 213 (227)
T ss_dssp CC--STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHH-HHHTT-SEEEEEEECT
T ss_pred CC--CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHH-HHHhh-ceeeeEeccC
Confidence 54 112 23559999999999999988732211 1121 22112 2333 34555 8877655443
No 160
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.64 E-value=8.1e-05 Score=60.51 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=63.7
Q ss_pred cccceEEEEecCCccChHHHHHHHHHHHHHHhhh-------cCCCeEEEeccCCCCC--------CCCCceeEEEecCcc
Q 022285 5 KMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLP--------VESFSIDTVLSISSS 69 (299)
Q Consensus 5 ~~~~~vLlL~~~~~vt~~dlse~m~~~A~~~~~~-------~~~~i~~~~gd~~~Lp--------~~~~sfD~Vls~~~~ 69 (299)
+.+.+||-+-.++......+...+- ....+.. ...++.+..+|+..++ +++++||+|++...+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~--~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIG--GKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHC--TTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhC--CCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 4567888887666443333332210 0001100 1257889999999887 788899999998877
Q ss_pred CCCC-h-----------HHHHHHHHHhccCCcEEEEEecCC
Q 022285 70 HELP-G-----------DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 70 ~~~~-~-----------~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
++.. . ..++.+++++|+|||.+++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7665 2 588999999999999999987654
No 161
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.63 E-value=5.5e-05 Score=64.36 Aligned_cols=75 Identities=12% Similarity=0.074 Sum_probs=58.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.++..|.++.|++.|++++... ..++.+..+|+..++ +.++||+|++... .+...++.++.++|+|||.+++...
T Consensus 91 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 91 HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3445577788999998876554 346999999999876 5678999997542 2256899999999999999998754
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.63 E-value=8.6e-05 Score=65.03 Aligned_cols=86 Identities=12% Similarity=0.161 Sum_probs=65.0
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCc-eeEEEecCccC
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFS-IDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~s-fD~Vls~~~~~ 70 (299)
.+.+||-+-.| ..++..|+++.+++.|++++... ..++.+..+|+ ..++++.. ||+|++...++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~ 169 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAP 169 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHH
Confidence 45678877555 34556677888999998776543 45799999997 45666554 99999998887
Q ss_pred CCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 71 ELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 71 ~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+++ .++.++|||||++++....
T Consensus 170 ~~~-----~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 170 KIP-----EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp SCC-----HHHHHTEEEEEEEEEEECS
T ss_pred HHH-----HHHHHhcCCCcEEEEEEec
Confidence 766 3789999999999988764
No 163
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.63 E-value=5.2e-05 Score=65.67 Aligned_cols=75 Identities=15% Similarity=0.088 Sum_probs=59.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc------CCCeEEEeccCCCCC----CCCCceeEEEecCccCCCChHHHHHHHHHhccC
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLP----VESFSIDTVLSISSSHELPGDQLLEEISRVLKP 87 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~------~~~i~~~~gd~~~Lp----~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKP 87 (299)
.++..|+++.|++.|++++... ..++.+..+|+...+ +....||+|++....+++ +.+++++|||
T Consensus 111 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-----~~~~~~~Lkp 185 (227)
T 2pbf_A 111 YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL-----PEILVDLLAE 185 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-----CHHHHHHEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH-----HHHHHHhcCC
Confidence 4556677888999998776543 368999999998865 567889999998877765 3678999999
Q ss_pred CcEEEEEecC
Q 022285 88 GGTILIYKKL 97 (299)
Q Consensus 88 GG~l~i~~~~ 97 (299)
||++++....
T Consensus 186 gG~lv~~~~~ 195 (227)
T 2pbf_A 186 NGKLIIPIEE 195 (227)
T ss_dssp EEEEEEEEEE
T ss_pred CcEEEEEEcc
Confidence 9999987653
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.62 E-value=7.6e-05 Score=69.40 Aligned_cols=73 Identities=19% Similarity=0.158 Sum_probs=56.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC---CCC-hHHHHHHHHHhccCCcEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH---ELP-GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~---~~~-~~~~L~ei~RvLKPGG~l~ 92 (299)
++..|++ .|+..|++++... ..++.++.+|+..+++++++||+|++....+ +.. ...++.++.|+|||||.++
T Consensus 64 v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 64 VIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 4455666 5888887765443 3579999999999999889999999875322 222 5688999999999999997
No 165
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.61 E-value=0.00014 Score=67.09 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=56.7
Q ss_pred cChHHHHHHHHHHHHHHhhhc------CCCeEEEeccCCCC-CCCCCceeEEEecCccCCCC-----hHHHHHHHHHhcc
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQL-PVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 86 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~------~~~i~~~~gd~~~L-p~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLK 86 (299)
++..|+.+.|++.|++++... .+++.++.+|+... +..+++||+|++.....+.+ ...+++++.|+||
T Consensus 110 V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lk 189 (294)
T 3adn_A 110 ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN 189 (294)
T ss_dssp EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEE
T ss_pred EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcC
Confidence 456788889999998875432 56899999998754 44578999999976443322 2679999999999
Q ss_pred CCcEEEEEe
Q 022285 87 PGGTILIYK 95 (299)
Q Consensus 87 PGG~l~i~~ 95 (299)
|||.|++..
T Consensus 190 pgG~lv~~~ 198 (294)
T 3adn_A 190 PGGIFVAQN 198 (294)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEec
Confidence 999999875
No 166
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.61 E-value=1.5e-06 Score=76.32 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=63.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC--CCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~--~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.|++++.... .++.++++|+..++ ++.+||+|++...+++.. ....+.+++++|+|||.+++
T Consensus 101 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 101 MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 456677899999999998776543 58999999999887 678999999998888776 44477789999999999764
Q ss_pred E
Q 022285 94 Y 94 (299)
Q Consensus 94 ~ 94 (299)
.
T Consensus 180 ~ 180 (241)
T 3gdh_A 180 R 180 (241)
T ss_dssp H
T ss_pred H
Confidence 4
No 167
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.61 E-value=0.00013 Score=67.64 Aligned_cols=102 Identities=18% Similarity=0.082 Sum_probs=69.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCc------cCCCC-----------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS------SHELP----------------- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~------~~~~~----------------- 73 (299)
.++..|+++.|++.++++++.. ..++.++.+|+..++..+++||+|++... ++..+
T Consensus 145 ~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~ 224 (315)
T 1ixk_A 145 VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGL 224 (315)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHH
Confidence 4556678889999998877654 35899999999988765778999998532 11111
Q ss_pred hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
...++.+++++|||||+|++....-...+. .. .+...+...||..+
T Consensus 225 q~~~L~~~~~~LkpGG~lv~stcs~~~~En-e~---~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 225 QMRLLEKGLEVLKPGGILVYSTCSLEPEEN-EF---VIQWALDNFDVELL 270 (315)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCCCGGGT-HH---HHHHHHHHSSEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEEeCCCChHHh-HH---HHHHHHhcCCCEEe
Confidence 047899999999999999987654321111 11 23344556787654
No 168
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.59 E-value=1.3e-05 Score=66.70 Aligned_cols=81 Identities=6% Similarity=-0.035 Sum_probs=61.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEeccCCC-CCCCCCceeEEEecCccCCCChHHHHHHHH--HhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~--RvLKPGG~l~ 92 (299)
.++..|+++.|++.|++++.... .++.++.+|+.+ ++..++.||+|++...++......++..+. ++|||||.++
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 56 AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEE
Confidence 45567888999999988765432 479999999887 454557799999986654323456777777 9999999999
Q ss_pred EEecCC
Q 022285 93 IYKKLT 98 (299)
Q Consensus 93 i~~~~~ 98 (299)
+.....
T Consensus 136 ~~~~~~ 141 (177)
T 2esr_A 136 CETDKT 141 (177)
T ss_dssp EEEETT
T ss_pred EEECCc
Confidence 887654
No 169
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.57 E-value=0.00018 Score=67.16 Aligned_cols=85 Identities=15% Similarity=0.216 Sum_probs=63.3
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-hH--HHHHHHHHhccC---CcEEEEEecCCCCccc------hHH-
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKP---GGTILIYKKLTSDKGD------VDK- 106 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKP---GG~l~i~~~~~~~~g~------~~~- 106 (299)
..++.++.+|+.. |++ .||+|++..++|+++ .. .++++++|+||| ||+|+|.+........ ...
T Consensus 235 ~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~ 311 (358)
T 1zg3_A 235 NENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLD 311 (358)
T ss_dssp CSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHH
T ss_pred CCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHh
Confidence 3569999999987 776 499999999999887 44 899999999999 9999998764221111 000
Q ss_pred --------------HHHHHHHHHHHCCceeceeec
Q 022285 107 --------------AISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 107 --------------~~~~l~~~L~laGFv~v~~~~ 127 (299)
..+++...+..+||..++...
T Consensus 312 ~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 312 YDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred hCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 134667788889998776543
No 170
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.56 E-value=8.8e-05 Score=65.61 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=59.7
Q ss_pred ccChHHHHHHHHHHHHHHhhh---------cCCCeEEEeccCCC-CC--CCCCceeEEEecCccCCCC---------hHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ---------CDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQ 76 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~---------~~~~i~~~~gd~~~-Lp--~~~~sfD~Vls~~~~~~~~---------~~~ 76 (299)
.++..|+++.|+..|++++.. ...++.++.+|+.. ++ +++.+||.|+..+.-.|.. ...
T Consensus 75 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~ 154 (246)
T 2vdv_E 75 LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNT 154 (246)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHH
T ss_pred CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHH
Confidence 355668888899988876543 23689999999986 67 7889999999776433321 147
Q ss_pred HHHHHHHhccCCcEEEEEe
Q 022285 77 LLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 77 ~L~ei~RvLKPGG~l~i~~ 95 (299)
++.++.++|||||.|++..
T Consensus 155 ~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 155 LLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEe
Confidence 9999999999999999864
No 171
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.53 E-value=8.4e-05 Score=69.56 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=62.2
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCC--CCCCCceeEEEecCccCCC-----ChHHHHHHHHHhccCC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL--PVESFSIDTVLSISSSHEL-----PGDQLLEEISRVLKPG 88 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~~-----~~~~~L~ei~RvLKPG 88 (299)
..++..|+.+.|++.|+++.... .+++.++.+|+..+ .+++++||+|++....++. ....++++++|+|+||
T Consensus 114 ~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~Lkpg 193 (317)
T 3gjy_A 114 SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPG 193 (317)
T ss_dssp CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEE
T ss_pred cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 34567788899999999876432 57899999998765 3457899999986543322 1368999999999999
Q ss_pred cEEEEEecC
Q 022285 89 GTILIYKKL 97 (299)
Q Consensus 89 G~l~i~~~~ 97 (299)
|.|++....
T Consensus 194 Gvlv~~~~~ 202 (317)
T 3gjy_A 194 GLYVANCGD 202 (317)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEecC
Confidence 999888753
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.53 E-value=3.4e-05 Score=67.90 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=60.7
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc--C-CCeEEEeccCCCC-C-CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcE
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQC--D-PQIITQASSLSQL-P-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGT 90 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~--~-~~i~~~~gd~~~L-p-~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~ 90 (299)
+..++..|+++.|.+.|+++++.. . .++.++.+|+..+ + +++++||+|++...... ...++.+++|+|||||.
T Consensus 81 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~--~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 81 NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPMD--LKALVDAAWPLLRRGGA 158 (221)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTTT--HHHHHHHHHHHEEEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHHH--HHHHHHHHHHHcCCCcE
Confidence 345677888999999999877653 2 4799999988654 2 44789999998653222 35689999999999999
Q ss_pred EEEEec
Q 022285 91 ILIYKK 96 (299)
Q Consensus 91 l~i~~~ 96 (299)
|++.+.
T Consensus 159 lv~dn~ 164 (221)
T 3dr5_A 159 LVLADA 164 (221)
T ss_dssp EEETTT
T ss_pred EEEeCC
Confidence 998654
No 173
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.50 E-value=2.8e-05 Score=75.22 Aligned_cols=57 Identities=18% Similarity=0.138 Sum_probs=48.9
Q ss_pred CCCeEEEeccCCCCCCC------CCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 40 DPQIITQASSLSQLPVE------SFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~------~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
..++.++++|+.++||. +++||+|++.. .|++. ...+|++++|+|||||.|++.+..
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 46899999999999988 78999999875 45544 678999999999999999998764
No 174
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.49 E-value=9e-05 Score=70.56 Aligned_cols=80 Identities=16% Similarity=0.100 Sum_probs=61.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC----CCeEEEeccCCCCCCCCCceeEEEecCccCCC---C---hHHHHHHHHHhcc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCD----PQIITQASSLSQLPVESFSIDTVLSISSSHEL---P---GDQLLEEISRVLK 86 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~----~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~---~---~~~~L~ei~RvLK 86 (299)
..++..|+++.|++.|++++.... .++.+..+|+.+ ++++++||+|+++..+|+. . ...++.++.++||
T Consensus 247 ~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lk 325 (375)
T 4dcm_A 247 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 325 (375)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEE
T ss_pred CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCC
Confidence 456677889999999988765422 368889999987 6778899999999887742 2 2468999999999
Q ss_pred CCcEEEEEecC
Q 022285 87 PGGTILIYKKL 97 (299)
Q Consensus 87 PGG~l~i~~~~ 97 (299)
|||+|++....
T Consensus 326 pgG~l~iv~n~ 336 (375)
T 4dcm_A 326 INGELYIVANR 336 (375)
T ss_dssp EEEEEEEEEET
T ss_pred CCcEEEEEEEC
Confidence 99999987644
No 175
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.48 E-value=0.00018 Score=67.00 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=56.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-----CCCeEEEeccCCC-CCCCCCceeEEEecCccCCCC-----hHHHHHHHHHhcc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-----DPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 86 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-----~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLK 86 (299)
.++..|+.+.|++.|+++.... .+++.++.+|+.. ++..+++||+|++....++.+ ...++++++|+|+
T Consensus 134 ~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lk 213 (314)
T 2b2c_A 134 KVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALK 213 (314)
T ss_dssp EEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcC
Confidence 4556688899999999876432 5789999999875 344577899999876433222 1678999999999
Q ss_pred CCcEEEEEe
Q 022285 87 PGGTILIYK 95 (299)
Q Consensus 87 PGG~l~i~~ 95 (299)
|||.|++..
T Consensus 214 pgG~lv~~~ 222 (314)
T 2b2c_A 214 EDGILSSQG 222 (314)
T ss_dssp EEEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999875
No 176
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.48 E-value=0.00032 Score=62.69 Aligned_cols=125 Identities=16% Similarity=0.046 Sum_probs=73.4
Q ss_pred ccccceEEEEecCCcc---------------ChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCC---CCCceeEEEe
Q 022285 4 GKMQSAVLALSEDKIL---------------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLS 65 (299)
Q Consensus 4 ~~~~~~vLlL~~~~~v---------------t~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~---~~~sfD~Vls 65 (299)
.+.|.+||-|-.++-. ...|+++.|+....+.+.. ..++.++.+|+..... ..++||+|++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhhccccceEEEEe
Confidence 3467788888554432 2335556665433222222 3689999999876431 2468999999
Q ss_pred cCccCCCChHHHHHHHHHhccCCcEEEEEecCCC---CccchHHHHHHHHHHHHHCCceeceeeccccc
Q 022285 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS---DKGDVDKAISALEGKLLLAGFLDAQRIQLKSV 131 (299)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~---~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~ 131 (299)
..+..+ ....++..+.++|||||+|++...... +.. +..........|..+||...+.....|.
T Consensus 153 d~a~~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~-~~e~~~~~~~~L~~~gf~~~~~~~l~p~ 219 (232)
T 3id6_C 153 DIAQPD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD-PKEIYKTEVEKLENSNFETIQIINLDPY 219 (232)
T ss_dssp CCCCTT-HHHHHHHHHHHHEEEEEEEEEEEC-------CC-SSSSTTHHHHHHHHTTEEEEEEEECTTT
T ss_pred cCCChh-HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC-HHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 864311 123345566669999999998742211 100 0001124556778889998887766553
No 177
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.47 E-value=3.5e-05 Score=66.96 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=59.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCC-CCCCC-----CceeEEEecCccCCCC-hHHHHHHHHHhccC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LPVES-----FSIDTVLSISSSHELP-GDQLLEEISRVLKP 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~-Lp~~~-----~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKP 87 (299)
..++..|+++.|++.|++++... ..++.++.+|+.. ++... ++||+|++....+++. ...++.++ |+|||
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkp 162 (221)
T 3u81_A 84 ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRK 162 (221)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCT
T ss_pred CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCC
Confidence 45667788999999999876553 3469999999754 33222 7899999987665554 34566667 99999
Q ss_pred CcEEEEEecCC
Q 022285 88 GGTILIYKKLT 98 (299)
Q Consensus 88 GG~l~i~~~~~ 98 (299)
||.|++.+...
T Consensus 163 gG~lv~~~~~~ 173 (221)
T 3u81_A 163 GTVLLADNVIV 173 (221)
T ss_dssp TCEEEESCCCC
T ss_pred CeEEEEeCCCC
Confidence 99999876653
No 178
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.47 E-value=4.8e-05 Score=66.84 Aligned_cols=79 Identities=10% Similarity=0.119 Sum_probs=60.7
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-C-CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEE
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (299)
+..++..|+++.|++.|++++... ..++.++.+|+... | ..+++||+|++..... ....++.++.++|||||.|
T Consensus 95 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~--~~~~~l~~~~~~LkpgG~l 172 (232)
T 3ntv_A 95 DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAKA--QSKKFFEIYTPLLKHQGLV 172 (232)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTSS--SHHHHHHHHGGGEEEEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcHH--HHHHHHHHHHHhcCCCeEE
Confidence 345567788999999999877554 35899999999764 4 3478999999765322 2467899999999999999
Q ss_pred EEEec
Q 022285 92 LIYKK 96 (299)
Q Consensus 92 ~i~~~ 96 (299)
++.+.
T Consensus 173 v~d~~ 177 (232)
T 3ntv_A 173 ITDNV 177 (232)
T ss_dssp EEECT
T ss_pred EEeeC
Confidence 88654
No 179
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.45 E-value=0.00016 Score=65.77 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=70.2
Q ss_pred ccChHHHHHHHHHHHHHHhhh----c-CCCeEEEeccCCC-CCCCCCceeEEEecCccCCCC-----hHHHHHHHHHhcc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ----C-DPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 86 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~----~-~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLK 86 (299)
.++..|+.+.|++.|+++... . .+++.++.+|+.. ++..+++||+|++....++.+ ...++++++|+||
T Consensus 101 ~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~ 180 (275)
T 1iy9_A 101 KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALK 180 (275)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEE
T ss_pred eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcC
Confidence 345667888999999886532 2 5789999999875 444467999999976543322 3689999999999
Q ss_pred CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 87 PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 87 PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
|||.|++....... . ......+...+... |..+...
T Consensus 181 pgG~lv~~~~~~~~--~-~~~~~~~~~~l~~~-F~~v~~~ 216 (275)
T 1iy9_A 181 EDGIFVAQTDNPWF--T-PELITNVQRDVKEI-FPITKLY 216 (275)
T ss_dssp EEEEEEEECCCTTT--C-HHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCcEEEEEcCCccc--c-HHHHHHHHHHHHHh-CCCeEEE
Confidence 99999987432110 1 12223444455544 7665543
No 180
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.42 E-value=2.7e-05 Score=63.81 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=58.7
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC-C-CC--CCceeEEEecCccCCCChHHHHHHHH--HhccCCcEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VE--SFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTIL 92 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L-p-~~--~~sfD~Vls~~~~~~~~~~~~L~ei~--RvLKPGG~l~ 92 (299)
++..|+++.|++.|++++.....++.+..+|+.+. + ++ ..+||+|++...++ .....+++.+. ++|||||.++
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~ 144 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYV 144 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEE
Confidence 45668889999999887654433899999998763 2 11 34899999987665 23456777777 9999999999
Q ss_pred EEecCC
Q 022285 93 IYKKLT 98 (299)
Q Consensus 93 i~~~~~ 98 (299)
+.....
T Consensus 145 ~~~~~~ 150 (171)
T 1ws6_A 145 LQHPKD 150 (171)
T ss_dssp EEEETT
T ss_pred EEeCCc
Confidence 887654
No 181
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.41 E-value=9.6e-05 Score=68.47 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=54.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhc------------CCCeEEEeccCCCC--CCCCCceeEEEecCccCCCChHHHHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC------------DPQIITQASSLSQL--PVESFSIDTVLSISSSHELPGDQLLEEISR 83 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~------------~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~~~~~~~L~ei~R 83 (299)
.++..|+++.+++.|++++... ..++.+..+|+.++ ++++++||+|++..... ..++.++++
T Consensus 132 ~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~----~~~l~~~~~ 207 (336)
T 2b25_A 132 RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNP----HVTLPVFYP 207 (336)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSST----TTTHHHHGG
T ss_pred eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCCH----HHHHHHHHH
Confidence 3445577888999998876531 36899999999887 57778999999865322 347899999
Q ss_pred hccCCcEEEEEecC
Q 022285 84 VLKPGGTILIYKKL 97 (299)
Q Consensus 84 vLKPGG~l~i~~~~ 97 (299)
+|||||.|++..+.
T Consensus 208 ~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 208 HLKHGGVCAVYVVN 221 (336)
T ss_dssp GEEEEEEEEEEESS
T ss_pred hcCCCcEEEEEeCC
Confidence 99999999987753
No 182
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.40 E-value=0.00034 Score=63.76 Aligned_cols=91 Identities=15% Similarity=0.194 Sum_probs=66.8
Q ss_pred ccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhhc-----CCCeEEEeccCCCC-CCCCCceeEEEe
Q 022285 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-----DPQIITQASSLSQL-PVESFSIDTVLS 65 (299)
Q Consensus 6 ~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~~-----~~~i~~~~gd~~~L-p~~~~sfD~Vls 65 (299)
++.+||.|-.|. .++..|+.+.|++.|+++.... .+++.++.+|+... +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 455788775443 4556688899999998876432 57899999998753 333678999999
Q ss_pred cCccCCCC-----hHHHHHHHHHhccCCcEEEEEec
Q 022285 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
....++.+ ...++++++|+|||||.|++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 65443322 16899999999999999998743
No 183
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.39 E-value=7.6e-05 Score=66.37 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=59.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCC-CCCC--CCceeEEEecCccCCCChHHHHHHHHHhccCCcEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LPVE--SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~-Lp~~--~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (299)
..++..|+++.|++.|++++... ..++.++.+|+.. ++.. ..+||+|++..... ....++.++.|+|||||.|
T Consensus 89 ~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG~l 166 (248)
T 3tfw_A 89 GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDADKP--NNPHYLRWALRYSRPGTLI 166 (248)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCchH--HHHHHHHHHHHhcCCCeEE
Confidence 45667788899999999877543 3579999999875 4433 34899999865311 1457899999999999999
Q ss_pred EEEecC
Q 022285 92 LIYKKL 97 (299)
Q Consensus 92 ~i~~~~ 97 (299)
++.+..
T Consensus 167 v~~~~~ 172 (248)
T 3tfw_A 167 IGDNVV 172 (248)
T ss_dssp EEECCS
T ss_pred EEeCCC
Confidence 987654
No 184
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.39 E-value=0.00015 Score=67.99 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=62.8
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccC
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~ 70 (299)
.+.+||-|-.|+ .++..|.++ |...|++++... ..++.++.+|++.++++ ++||+|++....+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 355677765443 344556664 777777765432 36899999999998876 5799999987655
Q ss_pred CCC---hHHHHHHHHHhccCCcEEEEE
Q 022285 71 ELP---GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 71 ~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (299)
++. ....+.++.|+|||||.+++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 443 346788899999999999854
No 185
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.38 E-value=6.8e-05 Score=69.48 Aligned_cols=78 Identities=13% Similarity=0.175 Sum_probs=61.2
Q ss_pred ccChHHHHHHHHHHHHHHhhh-----c-CCCeEEEeccCCC-CCCCCCceeEEEecCccCC---CC-----hHHHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ-----C-DPQIITQASSLSQ-LPVESFSIDTVLSISSSHE---LP-----GDQLLEEIS 82 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-----~-~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~---~~-----~~~~L~ei~ 82 (299)
.++..|+.+.|++.|+++... . .+++.++.+|+.. ++..+++||+|++....++ -+ ...++++++
T Consensus 103 ~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~ 182 (314)
T 1uir_A 103 KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVK 182 (314)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHH
Confidence 355678889999999887543 2 5789999999876 4545789999999876555 22 368899999
Q ss_pred HhccCCcEEEEEe
Q 022285 83 RVLKPGGTILIYK 95 (299)
Q Consensus 83 RvLKPGG~l~i~~ 95 (299)
|+|||||.|++..
T Consensus 183 ~~LkpgG~lv~~~ 195 (314)
T 1uir_A 183 AHLNPGGVMGMQT 195 (314)
T ss_dssp HTEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEc
Confidence 9999999999874
No 186
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.33 E-value=0.00027 Score=65.27 Aligned_cols=78 Identities=14% Similarity=-0.046 Sum_probs=56.9
Q ss_pred CCeEE-EeccCCCCCCCCCceeEEEecCccCC-----------CC-hHHHHHHHHHhccCCcEEEEEecCCCCccchHHH
Q 022285 41 PQIIT-QASSLSQLPVESFSIDTVLSISSSHE-----------LP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKA 107 (299)
Q Consensus 41 ~~i~~-~~gd~~~Lp~~~~sfD~Vls~~~~~~-----------~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~ 107 (299)
.++.+ +++|+..++++ ++||+|++....++ .. ...++++++|+|||||+|++..+.... ..
T Consensus 105 ~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~---~~-- 178 (290)
T 2xyq_A 105 SDADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NA-- 178 (290)
T ss_dssp CSSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CH--
T ss_pred CCCEEEEECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC---HH--
Confidence 36888 99999998875 68999999743221 11 247899999999999999997765321 11
Q ss_pred HHHHHHHHHHCCceeceee
Q 022285 108 ISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 108 ~~~l~~~L~laGFv~v~~~ 126 (299)
.+...+...||..+...
T Consensus 179 --~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 179 --DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp --HHHHHHTTEEEEEEEEE
T ss_pred --HHHHHHHHcCCcEEEEE
Confidence 55667778899876654
No 187
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.31 E-value=0.00014 Score=68.36 Aligned_cols=77 Identities=18% Similarity=0.271 Sum_probs=59.0
Q ss_pred ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEeccCCCC--CCCCCceeEEEecCccCCCC-----hHHHHHHHHHhc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQL--PVESFSIDTVLSISSSHELP-----GDQLLEEISRVL 85 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-----~~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvL 85 (299)
.++..|+++.|++.|++++.. ..+++.++.+|+... .+++++||+|++.....+.+ ...++++++|+|
T Consensus 146 ~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~L 225 (334)
T 1xj5_A 146 QIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARAL 225 (334)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhc
Confidence 456778889999999987643 257899999998754 24467999999865422211 368999999999
Q ss_pred cCCcEEEEE
Q 022285 86 KPGGTILIY 94 (299)
Q Consensus 86 KPGG~l~i~ 94 (299)
+|||.|++.
T Consensus 226 kpgG~lv~~ 234 (334)
T 1xj5_A 226 RPGGVVCTQ 234 (334)
T ss_dssp EEEEEEEEE
T ss_pred CCCcEEEEe
Confidence 999999986
No 188
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.30 E-value=0.00032 Score=59.26 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=59.7
Q ss_pred cccceEEEEecCCccChHHHHHHHHHHHHHHhhh-------cCCCeEEEeccCCCCC-----------------------
Q 022285 5 KMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLP----------------------- 54 (299)
Q Consensus 5 ~~~~~vLlL~~~~~vt~~dlse~m~~~A~~~~~~-------~~~~i~~~~gd~~~Lp----------------------- 54 (299)
+.+.+||-|--|+-.-...+.+.+-.. ...+.. ...++.++++|+..++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~-~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 99 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNY-KNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLK 99 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTS-CEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCC-CceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHH
Confidence 456678888666554333333222100 001100 1246889999998887
Q ss_pred --CCCCceeEEEecCccCCCC-----h-------HHHHHHHHHhccCCcEEEEEecC
Q 022285 55 --VESFSIDTVLSISSSHELP-----G-------DQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 55 --~~~~sfD~Vls~~~~~~~~-----~-------~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+++.+||+|++....++.. . ..++.+++|+|||||.|++..+.
T Consensus 100 ~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 100 EILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 6778999999987766631 1 13789999999999999987654
No 189
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.29 E-value=0.0001 Score=63.17 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=58.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-CCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
..++..|+++.|++.|++++... ..++.++.+|+..+ |..++ ||+|++... ......++++++|+|||||.|++
T Consensus 82 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~--~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 82 SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD--VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT--TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC--hhhhHHHHHHHHHhcCCCeEEEE
Confidence 45667788899999998776543 34799999988653 55456 999998743 12256789999999999999998
Q ss_pred Eec
Q 022285 94 YKK 96 (299)
Q Consensus 94 ~~~ 96 (299)
.+.
T Consensus 159 ~~~ 161 (210)
T 3c3p_A 159 VNA 161 (210)
T ss_dssp ESS
T ss_pred ECc
Confidence 654
No 190
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.28 E-value=0.0003 Score=64.60 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=57.2
Q ss_pred ccChHHHHHHHHHHHHHHhhh----c-CCCeEEEeccCCC-CCCCCCceeEEEecCccCCCC------hHHHHHHHHHhc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ----C-DPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP------GDQLLEEISRVL 85 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~----~-~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~------~~~~L~ei~RvL 85 (299)
.++..|+.+.|++.|++++.. . .+++.++.+|+.. ++..+++||+|++....+|+. ...++++++++|
T Consensus 116 ~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~L 195 (296)
T 1inl_A 116 KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDAL 195 (296)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhc
Confidence 345668888999999887532 2 5789999999765 444567899999865433221 268899999999
Q ss_pred cCCcEEEEEe
Q 022285 86 KPGGTILIYK 95 (299)
Q Consensus 86 KPGG~l~i~~ 95 (299)
||||.|++..
T Consensus 196 kpgG~lv~~~ 205 (296)
T 1inl_A 196 KEDGVFSAET 205 (296)
T ss_dssp EEEEEEEEEC
T ss_pred CCCcEEEEEc
Confidence 9999999874
No 191
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.28 E-value=0.00013 Score=63.65 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=60.2
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-CCC--CCceeEEEecCccCCCChHHHHHHHHHhccCCcEE
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVE--SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p~~--~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (299)
..++..|+++.+++.|++++... ..++.++.+|+... +.. +++||+|++....+ ....++.++.++|||||.|
T Consensus 79 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~l 156 (233)
T 2gpy_A 79 ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVRPGGLI 156 (233)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEE
Confidence 34556678889999998876543 24799999998764 433 57899999876533 2467899999999999999
Q ss_pred EEEecC
Q 022285 92 LIYKKL 97 (299)
Q Consensus 92 ~i~~~~ 97 (299)
++.+..
T Consensus 157 v~~~~~ 162 (233)
T 2gpy_A 157 LSDNVL 162 (233)
T ss_dssp EEETTT
T ss_pred EEEcCC
Confidence 987543
No 192
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.28 E-value=9.9e-05 Score=68.25 Aligned_cols=91 Identities=10% Similarity=0.129 Sum_probs=65.6
Q ss_pred ccceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEeccCCC-CCCCCCceeEEEe
Q 022285 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVLS 65 (299)
Q Consensus 6 ~~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~-----~~~~i~~~~gd~~~-Lp~~~~sfD~Vls 65 (299)
++.+||.|-.|+ .++..|+.+.|++.|+++... ..+++.++.+|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 445777775433 455678889999999887543 25789999999875 4555789999998
Q ss_pred cCccCCCC-----hHHHHHHHHHhccCCcEEEEEec
Q 022285 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
....++.+ ...++++++|+|||||.|++...
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 76543322 25689999999999999998763
No 193
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.27 E-value=0.00071 Score=62.92 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=59.7
Q ss_pred ccChHHHHHHHHHHHHHHhhh----c-CCCeEEEeccCCC-CCCCCCceeEEEecCccCCCC-----hHHHHHHHHHhcc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQ----C-DPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 86 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~----~-~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLK 86 (299)
.++..|+++.|++.|++++.. . .+++.++.+|+.. ++..+++||+|++....++-+ ...+++++.++||
T Consensus 142 ~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk 221 (321)
T 2pt6_A 142 NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALK 221 (321)
T ss_dssp EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcC
Confidence 455678889999999987643 2 5789999999865 333467899999876432211 2689999999999
Q ss_pred CCcEEEEEec
Q 022285 87 PGGTILIYKK 96 (299)
Q Consensus 87 PGG~l~i~~~ 96 (299)
|||.|++...
T Consensus 222 pgG~lv~~~~ 231 (321)
T 2pt6_A 222 PNGYCVAQCE 231 (321)
T ss_dssp EEEEEEEEEC
T ss_pred CCcEEEEEcC
Confidence 9999998753
No 194
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.21 E-value=0.00028 Score=63.76 Aligned_cols=77 Identities=12% Similarity=0.042 Sum_probs=61.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.++..|+++.|++.|+++++.. ..++.++.+|+..++. ...||+|++.... ....++.++.++|||||.+++...
T Consensus 145 ~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 145 LVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH---KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc---cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 4556678889999998876543 3578999999998854 6789999998653 345688999999999999998876
Q ss_pred CC
Q 022285 97 LT 98 (299)
Q Consensus 97 ~~ 98 (299)
..
T Consensus 221 ~~ 222 (272)
T 3a27_A 221 VA 222 (272)
T ss_dssp EE
T ss_pred Cc
Confidence 53
No 195
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.20 E-value=0.00016 Score=63.92 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=39.2
Q ss_pred EEeccCCCCCC-----CCCceeEEEecCccCCCC----------hHHHHHHHHHhccCCcEEEEEec
Q 022285 45 TQASSLSQLPV-----ESFSIDTVLSISSSHELP----------GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 45 ~~~gd~~~Lp~-----~~~sfD~Vls~~~~~~~~----------~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+.++|+..... ...+||+|+++..++... ...++.+++++|||||+|++...
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 89999877421 345899999986544332 24799999999999999998543
No 196
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.16 E-value=0.00086 Score=60.72 Aligned_cols=106 Identities=10% Similarity=0.032 Sum_probs=67.4
Q ss_pred ccChHHH-HHHHHHHHHHHh-----hhcC------CCeEEEeccCCCC--CC----CCCceeEEEecCccCCCC-hHHHH
Q 022285 18 ILPVSAV-LNAIRDLGDEAV-----EQCD------PQIITQASSLSQL--PV----ESFSIDTVLSISSSHELP-GDQLL 78 (299)
Q Consensus 18 ~vt~~dl-se~m~~~A~~~~-----~~~~------~~i~~~~gd~~~L--p~----~~~sfD~Vls~~~~~~~~-~~~~L 78 (299)
.++..|+ ++.|+..|++++ .... .++.+...+.... .+ ++.+||+|++...+++.+ ...++
T Consensus 104 ~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll 183 (281)
T 3bzb_A 104 QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALL 183 (281)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHH
Confidence 4667788 789999998876 2221 3677775443321 11 367899999987777765 67899
Q ss_pred HHHHHhcc---C--CcEEEEEecCCCCccchHHHHHHHHHHHHHCC-ceecee
Q 022285 79 EEISRVLK---P--GGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDAQR 125 (299)
Q Consensus 79 ~ei~RvLK---P--GG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG-Fv~v~~ 125 (299)
+++.++|+ | ||++++....... ........+...+..+| |.....
T Consensus 184 ~~l~~~Lk~~~p~~gG~l~v~~~~~~~--~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 184 RSVKMLLALPANDPTAVALVTFTHHRP--HLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HHHHHHBCCTTTCTTCEEEEEECC----------CTHHHHHHHHSTTEEEEEE
T ss_pred HHHHHHhcccCCCCCCEEEEEEEeeec--ccchhHHHHHHHHHhcCCEEEEEe
Confidence 99999999 9 9998765332110 00111124556778899 986544
No 197
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.16 E-value=0.0012 Score=63.94 Aligned_cols=81 Identities=20% Similarity=0.176 Sum_probs=60.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC--CCCCceeEEEecC------ccCCCCh--------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSIS------SSHELPG-------------- 74 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~------~~~~~~~-------------- 74 (299)
.++..|+++.+++.+++++... ..++.+..+|+..++ +++++||+|++.. .++..+.
T Consensus 286 ~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~ 365 (450)
T 2yxl_A 286 KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMS 365 (450)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHH
Confidence 4556677888899888877654 358999999999887 6668899999732 1221110
Q ss_pred ---HHHHHHHHHhccCCcEEEEEecCC
Q 022285 75 ---DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 75 ---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
..++.+++++|||||+|++.+..-
T Consensus 366 ~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 366 QLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 468999999999999999877543
No 198
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.10 E-value=0.00011 Score=65.23 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=43.5
Q ss_pred CCCeEEEeccCCCC---CCCC-CceeEEEecCccCCCChHHHHHHHHH-hccCCcEEEEEec
Q 022285 40 DPQIITQASSLSQL---PVES-FSIDTVLSISSSHELPGDQLLEEISR-VLKPGGTILIYKK 96 (299)
Q Consensus 40 ~~~i~~~~gd~~~L---p~~~-~sfD~Vls~~~~~~~~~~~~L~ei~R-vLKPGG~l~i~~~ 96 (299)
..++.++++|+..+ ++.+ .+||+|++... | .....++.+++| +|||||+|++.+.
T Consensus 129 ~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 129 MENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCceEEEECcchhHHHHHhhccCCCCEEEECCc-h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 36799999999884 6544 47999998664 3 345678999998 9999999998754
No 199
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.08 E-value=0.0001 Score=63.58 Aligned_cols=79 Identities=20% Similarity=0.191 Sum_probs=58.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-C-CCC----CceeEEEecCccCCCChHHHHHHHHHhccCC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VES----FSIDTVLSISSSHELPGDQLLEEISRVLKPG 88 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~~~----~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG 88 (299)
..++..|+++.|++.|++++... ..++.++.+|+... + +.. ++||+|++..... ....++.+++++||||
T Consensus 90 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~--~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 90 GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKA--NTDLYYEESLKLLREG 167 (225)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSCGG--GHHHHHHHHHHHEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCCHH--HHHHHHHHHHHhcCCC
Confidence 45667788899999998876543 34699999988543 2 211 7899999754311 1467899999999999
Q ss_pred cEEEEEecC
Q 022285 89 GTILIYKKL 97 (299)
Q Consensus 89 G~l~i~~~~ 97 (299)
|.|++.+..
T Consensus 168 G~lv~~~~~ 176 (225)
T 3tr6_A 168 GLIAVDNVL 176 (225)
T ss_dssp EEEEEECSS
T ss_pred cEEEEeCCC
Confidence 999987654
No 200
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.06 E-value=0.00027 Score=65.32 Aligned_cols=102 Identities=12% Similarity=0.035 Sum_probs=63.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEE-eccCCCCC---CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQ-ASSLSQLP---VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~-~gd~~~Lp---~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
.|+..|+++.|++++.++ ++++... ..++..++ ++..+||+|++..+++++ ..+|.+++|+|||||+|++
T Consensus 110 ~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl--~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 110 LVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL--NLILPALAKILVDGGQVVA 183 (291)
T ss_dssp EEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEE
T ss_pred EEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEEEEeeHhhH--HHHHHHHHHHcCcCCEEEE
Confidence 455667888888875332 2233322 22333332 345579999998776654 5789999999999999988
Q ss_pred Ee---cCCC--C---ccc---hH---HHHHHHHHHHHHCCceecee
Q 022285 94 YK---KLTS--D---KGD---VD---KAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 94 ~~---~~~~--~---~g~---~~---~~~~~l~~~L~laGFv~v~~ 125 (299)
.. +..+ . .|. +. ....++...+..+||.....
T Consensus 184 lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 184 LVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp EECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 72 2111 1 111 11 23467778889999986543
No 201
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.03 E-value=0.00028 Score=68.64 Aligned_cols=91 Identities=13% Similarity=0.020 Sum_probs=58.9
Q ss_pred ccceEEEEecCCc--------------cChHHHHHHHHHHH-------HHHhhhc---CCCeEEEeccCCCC--CC--CC
Q 022285 6 MQSAVLALSEDKI--------------LPVSAVLNAIRDLG-------DEAVEQC---DPQIITQASSLSQL--PV--ES 57 (299)
Q Consensus 6 ~~~~vLlL~~~~~--------------vt~~dlse~m~~~A-------~~~~~~~---~~~i~~~~gd~~~L--p~--~~ 57 (299)
.|.+||-|--|+. ++..|+++.|++.| ++++... ..++.++.++.... ++ ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4567777755433 33334444455555 7665443 26899988754322 22 24
Q ss_pred CceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 58 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 58 ~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
++||+|+++..++.-....++.+++|+|||||+|++.+.
T Consensus 322 ~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 322 PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 789999987655322256788999999999999998754
No 202
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.02 E-value=0.00087 Score=63.39 Aligned_cols=97 Identities=14% Similarity=0.007 Sum_probs=71.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEeccCCCCCCCCCceeEEEecCccCCC-------C--hHHHHHHHHHhcc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHEL-------P--GDQLLEEISRVLK 86 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~-------~--~~~~L~ei~RvLK 86 (299)
.++..|+++.|++.|++++.... .++.+.++|+..+|+++++||+|+++..+... . -..+++++.|+|
T Consensus 243 ~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l- 321 (373)
T 3tm4_A 243 EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL- 321 (373)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-
Confidence 56677899999999998876543 58999999999999988999999998654321 1 156788899999
Q ss_pred CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 87 PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 87 PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
||.+++.... . ..+.+.+...||......
T Consensus 322 -~g~~~~i~~~------~----~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 322 -EKRGVFITTE------K----KAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp -EEEEEEEESC------H----HHHHHHHHHTTEEEEEEE
T ss_pred -CCeEEEEECC------H----HHHHHHHHHcCCEEEEEE
Confidence 5666555432 1 145667788999876543
No 203
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.99 E-value=0.0004 Score=62.82 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=62.8
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhh-----cCCCeEEEeccCCCCCCCCCceeEEEecCc
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLPVESFSIDTVLSISS 68 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~-----~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~ 68 (299)
++.+||.|-.| ..++..|+.+.|++.|+++... ..+++.++.+|+.... ++||+|++...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~~ 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQE 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESSC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECCC
Confidence 34567777555 3455667888999998875432 2578999999998765 78999998742
Q ss_pred cCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 69 SHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.+..++++++|+|||||.|++..
T Consensus 149 ----dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 149 ----PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ----CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ----ChHHHHHHHHHhcCCCcEEEEEc
Confidence 23458999999999999999864
No 204
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.99 E-value=0.00069 Score=61.14 Aligned_cols=81 Identities=9% Similarity=0.054 Sum_probs=60.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCC----CCCceeEEEecCccCC---C---------------C
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV----ESFSIDTVLSISSSHE---L---------------P 73 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~----~~~sfD~Vls~~~~~~---~---------------~ 73 (299)
..++..|+++.+++.+++++... ..++.++.+|+..++. ..++||+|++...... + .
T Consensus 109 ~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~ 188 (274)
T 3ajd_A 109 GTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSL 188 (274)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHH
Confidence 34556678889999988877654 3589999999988765 3678999998732211 0 1
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
...++.+++++|||||+|++....
T Consensus 189 ~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 189 RQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECC
Confidence 367899999999999999987654
No 205
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=96.98 E-value=8.7e-05 Score=65.03 Aligned_cols=77 Identities=9% Similarity=0.012 Sum_probs=59.3
Q ss_pred CCccChHHHHHHHHHHHHHHhhhcCC--CeEEEeccCCCCCCCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEE
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~~~--~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (299)
.+.++..|+++.|++.++.++..... ++.+ +|.... .+...||+|++...+|++. .+..+..+++.|||||.|+
T Consensus 73 ~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 73 KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 44555779999999999998766543 4554 555544 4678899999999999886 3456679999999999998
Q ss_pred EEe
Q 022285 93 IYK 95 (299)
Q Consensus 93 i~~ 95 (299)
-..
T Consensus 150 Sfp 152 (200)
T 3fzg_A 150 SFP 152 (200)
T ss_dssp EEE
T ss_pred EeC
Confidence 666
No 206
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.97 E-value=0.00034 Score=68.79 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=57.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~ 92 (299)
.++..|+++ |++.|++++... ..++.++.+|+..++++ +.||+|++....+++. ....+.++.|+|||||.++
T Consensus 183 ~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 183 KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp EEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred EEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 455668887 888888776543 36899999999998875 5899999976544332 2456778899999999998
Q ss_pred EE
Q 022285 93 IY 94 (299)
Q Consensus 93 i~ 94 (299)
+.
T Consensus 261 ~~ 262 (480)
T 3b3j_A 261 PT 262 (480)
T ss_dssp SC
T ss_pred EE
Confidence 53
No 207
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.97 E-value=0.00025 Score=61.12 Aligned_cols=79 Identities=10% Similarity=0.122 Sum_probs=58.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-C-CC---CCceeEEEecCccCCCChHHHHHHHHHhccCCc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~~---~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (299)
..++..|+++.|++.|++++... ..++.++.+|+... + ++ ..+||+|++..... ....++.+++++|||||
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 84 GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLSRPGT 161 (223)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcCCCc
Confidence 45667788899999998876543 34699999988643 1 11 16799999875422 13578999999999999
Q ss_pred EEEEEecC
Q 022285 90 TILIYKKL 97 (299)
Q Consensus 90 ~l~i~~~~ 97 (299)
.|++.+..
T Consensus 162 ~lv~~~~~ 169 (223)
T 3duw_A 162 VIIGDNVV 169 (223)
T ss_dssp EEEEESCS
T ss_pred EEEEeCCC
Confidence 99887654
No 208
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.95 E-value=0.00013 Score=64.47 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=69.8
Q ss_pred cceEEEEecCC--------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC---CCCC---CceeEEE
Q 022285 7 QSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL---PVES---FSIDTVL 64 (299)
Q Consensus 7 ~~~vLlL~~~~--------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L---p~~~---~sfD~Vl 64 (299)
+.+||-|-.|+ .++..|+++.|++.|++++... ..++.++.+|+... +++. ++||+|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 45677775544 2345577889999999877543 23599999998762 5553 6899999
Q ss_pred ecCccCCCC----------------hHHHHHHHHHhccCCcEEEEEecCC----------C----CccchHHHHHHHHHH
Q 022285 65 SISSSHELP----------------GDQLLEEISRVLKPGGTILIYKKLT----------S----DKGDVDKAISALEGK 114 (299)
Q Consensus 65 s~~~~~~~~----------------~~~~L~ei~RvLKPGG~l~i~~~~~----------~----~~g~~~~~~~~l~~~ 114 (299)
++..+++.. ...++.+++|+|||||.+.+.+..- + ..+.. .....+...
T Consensus 146 ~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~ 224 (254)
T 2h00_A 146 CNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKK-CSLAPLKEE 224 (254)
T ss_dssp ECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESST-TSHHHHHHH
T ss_pred ECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCCh-hHHHHHHHH
Confidence 986544321 1245677788888888765432100 0 00000 011356677
Q ss_pred HHHCCceeceee
Q 022285 115 LLLAGFLDAQRI 126 (299)
Q Consensus 115 L~laGFv~v~~~ 126 (299)
|..+||.+++..
T Consensus 225 l~~~Gf~~v~~~ 236 (254)
T 2h00_A 225 LRIQGVPKVTYT 236 (254)
T ss_dssp HHHTTCSEEEEE
T ss_pred HHHcCCCceEEE
Confidence 888999876543
No 209
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.91 E-value=0.00061 Score=63.73 Aligned_cols=105 Identities=10% Similarity=-0.013 Sum_probs=68.2
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CC--CeEEEeccCCCCCCC----CCceeEEEecCccC----------CCC-hHHHH
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC-DP--QIITQASSLSQLPVE----SFSIDTVLSISSSH----------ELP-GDQLL 78 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~--~i~~~~gd~~~Lp~~----~~sfD~Vls~~~~~----------~~~-~~~~L 78 (299)
+.|+..|+++.|++.|++++... .. ++.++++|+..+... ..+||+|++..... +.. ...++
T Consensus 176 a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll 255 (332)
T 2igt_A 176 AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLML 255 (332)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHH
Confidence 35667789999999999876543 22 499999998765321 56899999964311 111 35789
Q ss_pred HHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 79 EEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
.++.++|||||.|++........ ........+...+..+|+..
T Consensus 256 ~~~~~~LkpgG~lli~~~~~~~~-~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 256 DICREILSPKALGLVLTAYSIRA-SFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp HHHHHTBCTTCCEEEEEECCTTS-CHHHHHHHHHHHTTTSCSEE
T ss_pred HHHHHhcCcCcEEEEEECCCCCC-CHHHHHHHHHHHHHHcCCeE
Confidence 99999999999987776543221 11211223333455678754
No 210
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.90 E-value=0.00038 Score=63.28 Aligned_cols=89 Identities=8% Similarity=0.083 Sum_probs=64.4
Q ss_pred ccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhh----h-------cCCCeEEEeccCCCC-CCCCCce
Q 022285 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVE----Q-------CDPQIITQASSLSQL-PVESFSI 60 (299)
Q Consensus 6 ~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~----~-------~~~~i~~~~gd~~~L-p~~~~sf 60 (299)
++.+||.|-.|+ .++..|+.+.|++.|+++.. - ..+++.++.+|+... +. +++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 345777775543 45567888999999988761 1 246899999987653 33 6789
Q ss_pred eEEEecCccCCCC-----hHHHHHHHHHhccCCcEEEEEe
Q 022285 61 DTVLSISSSHELP-----GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 61 D~Vls~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
|+|++....++.+ ...++++++++|+|||.|++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999876543222 2678999999999999999874
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.88 E-value=0.00034 Score=62.35 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=58.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-C-C-----CCCceeEEEecCccCCCChHHHHHHHHHhccC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPGDQLLEEISRVLKP 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~-----~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKP 87 (299)
..++..|+++.|.+.|+++.... ..++.++.+|+..+ + + ++++||+|++..... ....++.+++++|||
T Consensus 105 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 105 GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKD--NYLNYHKRLIDLVKV 182 (247)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCST--THHHHHHHHHHHBCT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchH--HHHHHHHHHHHhCCC
Confidence 45566778889999998876543 35799999988653 3 2 267899999875321 246789999999999
Q ss_pred CcEEEEEec
Q 022285 88 GGTILIYKK 96 (299)
Q Consensus 88 GG~l~i~~~ 96 (299)
||.|++.+.
T Consensus 183 GG~lv~d~~ 191 (247)
T 1sui_A 183 GGVIGYDNT 191 (247)
T ss_dssp TCCEEEECT
T ss_pred CeEEEEecC
Confidence 999998753
No 212
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.80 E-value=0.0006 Score=59.80 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=57.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCC----CCCCC--CceeEEEecCccCCCChHHHHHHHHHhccCCc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ----LPVES--FSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~----Lp~~~--~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (299)
.++..|+++.+++.|+++.... ..++.++.+++.. ++..+ ++||+|++..... ....++.++.++|||||
T Consensus 99 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 99 QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADKR--NYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCGG--GHHHHHHHHHHTEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCHH--HHHHHHHHHHHHcCCCe
Confidence 4566788889999998766443 3469999998643 34434 7899999875421 24578999999999999
Q ss_pred EEEEEecC
Q 022285 90 TILIYKKL 97 (299)
Q Consensus 90 ~l~i~~~~ 97 (299)
.|++.+..
T Consensus 177 ~lv~~~~~ 184 (232)
T 3cbg_A 177 LMVIDNVL 184 (232)
T ss_dssp EEEEECTT
T ss_pred EEEEeCCC
Confidence 99987653
No 213
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.78 E-value=6.8e-05 Score=66.73 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=56.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-CCC-----CCceeEEEecCccCCCChHHHHHHHHHhccCCc
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVE-----SFSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p~~-----~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (299)
.++..|+++.|++.|+++++.. ..++.++.+|+..+ +.. +++||+|++..... ....++.+++|+|||||
T Consensus 87 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG 164 (242)
T 3r3h_A 87 QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKT--NYLNYYELALKLVTPKG 164 (242)
T ss_dssp EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGG--GHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChH--HhHHHHHHHHHhcCCCe
Confidence 4455566677777777766543 35899999998654 221 47899999875411 14568999999999999
Q ss_pred EEEEEecC
Q 022285 90 TILIYKKL 97 (299)
Q Consensus 90 ~l~i~~~~ 97 (299)
.|++.+..
T Consensus 165 ~lv~d~~~ 172 (242)
T 3r3h_A 165 LIAIDNIF 172 (242)
T ss_dssp EEEEECSS
T ss_pred EEEEECCc
Confidence 99987654
No 214
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.76 E-value=0.0038 Score=55.73 Aligned_cols=98 Identities=14% Similarity=-0.014 Sum_probs=72.3
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 20 PVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
...|+++.+++.|+++++.. ..++.++.+|+.+...+.+.||+|+.....- -....++.+..+.|+++|+|+++-..
T Consensus 49 ~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg-~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 49 IAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG-RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch-HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 35688999999999887654 3579999999988765555899987532111 01246788888999999999987643
Q ss_pred CCCccchHHHHHHHHHHHHHCCceeceeec
Q 022285 98 TSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 98 ~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
. ...++..|..+||..+++.-
T Consensus 128 ~---------~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 128 R---------EDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp C---------HHHHHHHHHHTTEEEEEEEE
T ss_pred C---------hHHHHHHHHHCCCEEEEEEE
Confidence 2 23678899999999876653
No 215
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.75 E-value=0.0012 Score=63.33 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=50.3
Q ss_pred ccCCCCCCCCCceeEEEecCccCCCC--hHH-----------------------H---------------HHHHHHhccC
Q 022285 48 SSLSQLPVESFSIDTVLSISSSHELP--GDQ-----------------------L---------------LEEISRVLKP 87 (299)
Q Consensus 48 gd~~~Lp~~~~sfD~Vls~~~~~~~~--~~~-----------------------~---------------L~ei~RvLKP 87 (299)
+++..-.||+++||+|++++++||+. +.. + |+-.+|.|+|
T Consensus 138 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~p 217 (384)
T 2efj_A 138 GSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELIS 217 (384)
T ss_dssp SCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred hhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34445679999999999999999976 211 2 4444899999
Q ss_pred CcEEEEEecCCCCc--cchH-HHHHHHHHHHHHCCceece
Q 022285 88 GGTILIYKKLTSDK--GDVD-KAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 88 GG~l~i~~~~~~~~--g~~~-~~~~~l~~~L~laGFv~v~ 124 (299)
||++++.....++. .... ....+....|...|.+..+
T Consensus 218 GG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~e 257 (384)
T 2efj_A 218 RGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEE 257 (384)
T ss_dssp EEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHH
T ss_pred CCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchh
Confidence 99999998876544 3110 0122333445555665443
No 216
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.75 E-value=0.0015 Score=62.33 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=59.7
Q ss_pred ccceEEEEecCCc-------------cChHHHHHHHHHHHHHHhhh--cCCCeEEEeccCCCCCCCCCceeEEEecCc--
Q 022285 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISS-- 68 (299)
Q Consensus 6 ~~~~vLlL~~~~~-------------vt~~dlse~m~~~A~~~~~~--~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~-- 68 (299)
.|.+||-|--|+. |...|.+ .|...|++.++. ...+|.++.++++.+.++ ..||+|++...
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s-~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeCh-HHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 3667888765542 3333444 366777665433 346799999999999886 67999998542
Q ss_pred -cCCCC-hHHHHHHHHHhccCCcEEE
Q 022285 69 -SHELP-GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 69 -~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (299)
+.+-. ...++....|.|||||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 33322 5778888999999999986
No 217
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.70 E-value=0.0019 Score=54.09 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=43.0
Q ss_pred CCeEEE-eccCCCCC--------CCCCceeEEEecCccCC----CC-h-------HHHHHHHHHhccCCcEEEEEecCC
Q 022285 41 PQIITQ-ASSLSQLP--------VESFSIDTVLSISSSHE----LP-G-------DQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 41 ~~i~~~-~gd~~~Lp--------~~~~sfD~Vls~~~~~~----~~-~-------~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
.++.+. .+|+...+ +++++||+|++....++ .. . ..++++++|+|||||+|++..+..
T Consensus 70 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 70 EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 467888 88877653 34568999999654332 11 1 378999999999999999987653
No 218
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.70 E-value=0.0013 Score=62.72 Aligned_cols=53 Identities=21% Similarity=0.192 Sum_probs=42.6
Q ss_pred ccCCCCCCCCCceeEEEecCccCCCC--hH-------------------------------------HHHHHHHHhccCC
Q 022285 48 SSLSQLPVESFSIDTVLSISSSHELP--GD-------------------------------------QLLEEISRVLKPG 88 (299)
Q Consensus 48 gd~~~Lp~~~~sfD~Vls~~~~~~~~--~~-------------------------------------~~L~ei~RvLKPG 88 (299)
++...-.||+++||+|++++++||+. +. .+|+..+|.|+||
T Consensus 139 gSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pG 218 (374)
T 3b5i_A 139 GSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRG 218 (374)
T ss_dssp SCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45555678999999999999999986 21 2477889999999
Q ss_pred cEEEEEecCCCC
Q 022285 89 GTILIYKKLTSD 100 (299)
Q Consensus 89 G~l~i~~~~~~~ 100 (299)
|++++......+
T Consensus 219 G~mvl~~~gr~~ 230 (374)
T 3b5i_A 219 GAMFLVCLGRTS 230 (374)
T ss_dssp EEEEEEEEECCC
T ss_pred CEEEEEEecCCC
Confidence 999998776543
No 219
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.68 E-value=0.0023 Score=59.44 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=68.3
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-h------------------HHHHH
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G------------------DQLLE 79 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~------------------~~~L~ 79 (299)
+...|+.+.+.+.|+.++.....++.+..+|... +.....||+|+++..+++++ . ..++.
T Consensus 162 v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~ 240 (344)
T 2f8l_A 162 ASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIE 240 (344)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHH
Confidence 3455667788888887654433478888998765 33567899999997765443 1 15799
Q ss_pred HHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 80 EISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 80 ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
++.+.|||||++++..+..--.+.. ...+++.+...|++.
T Consensus 241 ~~~~~Lk~gG~~~~v~p~~~~~~~~---~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 241 QGMRYTKPGGYLFFLVPDAMFGTSD---FAKVDKFIKKNGHIE 280 (344)
T ss_dssp HHHHTEEEEEEEEEEEEGGGGGSTT---HHHHHHHHHHHEEEE
T ss_pred HHHHHhCCCCEEEEEECchhcCCch---HHHHHHHHHhCCeEE
Confidence 9999999999998877432100111 236677778888864
No 220
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.65 E-value=6.4e-05 Score=66.82 Aligned_cols=101 Identities=16% Similarity=0.082 Sum_probs=58.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhc----CCCeEEEe-ccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC----DPQIITQA-SSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~----~~~i~~~~-gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (299)
.|+..|+++.|++.|+++.... ..++.+.. .++...+++..+||++++.. ..++.+++|+|||||+|+
T Consensus 62 ~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv 134 (232)
T 3opn_A 62 LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVA 134 (232)
T ss_dssp EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEE
T ss_pred EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEE
Confidence 4566788888888876543221 12333333 23322123334555554332 578999999999999998
Q ss_pred EEecC---CCC--c---c---chH---HHHHHHHHHHHHCCceecee
Q 022285 93 IYKKL---TSD--K---G---DVD---KAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 93 i~~~~---~~~--~---g---~~~---~~~~~l~~~L~laGFv~v~~ 125 (299)
+.... ... . | ... ...+++...+..+||.....
T Consensus 135 ~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 135 ALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp EEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred EEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 86311 100 0 0 111 23467788899999986543
No 221
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.63 E-value=0.0032 Score=61.88 Aligned_cols=80 Identities=13% Similarity=0.157 Sum_probs=59.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCC-CCCceeEEEecCc------cC--------CCC--------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV-ESFSIDTVLSISS------SH--------ELP-------- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~-~~~sfD~Vls~~~------~~--------~~~-------- 73 (299)
.++..|+++.|++.++++++.. ..++.++.+|+..++. .+++||+|++... +. |.+
T Consensus 144 ~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~ 223 (479)
T 2frx_A 144 AILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAA 223 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHH
Confidence 4556678889999998887654 4579999999988764 5678999998321 11 111
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
...++.+++++|||||+|++.+-.
T Consensus 224 ~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 224 TQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeccc
Confidence 136889999999999999987653
No 222
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.60 E-value=0.00059 Score=59.74 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=56.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCC-CC--------------CCC--CceeEEEecCccCCCChHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LP--------------VES--FSIDTVLSISSSHELPGDQLL 78 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~-Lp--------------~~~--~sfD~Vls~~~~~~~~~~~~L 78 (299)
.++..|.++.+++.|++++... ..++.+..+|+.. ++ |++ ++||+|++...... ...++
T Consensus 87 ~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~--~~~~l 164 (239)
T 2hnk_A 87 KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN--YPNYY 164 (239)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG--HHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHH--HHHHH
Confidence 4556677788999988776543 2358999988754 22 233 78999998754222 35789
Q ss_pred HHHHHhccCCcEEEEEec
Q 022285 79 EEISRVLKPGGTILIYKK 96 (299)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~ 96 (299)
.++.++|||||.|++.+.
T Consensus 165 ~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 165 PLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHEEEEEEEEEECS
T ss_pred HHHHHHcCCCeEEEEEcc
Confidence 999999999999998763
No 223
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.58 E-value=0.0027 Score=57.79 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=56.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCce---eEEEecCccC-----------CCCh------
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSI---DTVLSISSSH-----------ELPG------ 74 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sf---D~Vls~~~~~-----------~~~~------ 74 (299)
..++..|+++.+++.|++++... ..++.++++|+.. +++ .+| |+|+++..+. |.+.
T Consensus 147 ~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~ 224 (284)
T 1nv8_A 147 AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGG 224 (284)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCC
Confidence 34567788999999999887654 2359999999986 333 479 9999984322 2221
Q ss_pred ---HHHHHHHH-HhccCCcEEEEEe
Q 022285 75 ---DQLLEEIS-RVLKPGGTILIYK 95 (299)
Q Consensus 75 ---~~~L~ei~-RvLKPGG~l~i~~ 95 (299)
..+++++. +.|+|||.|++..
T Consensus 225 ~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 225 EDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 26899999 9999999999753
No 224
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.56 E-value=0.00059 Score=58.91 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=57.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC--CCCC----CceeEEEecCccCCCChHHHHHHHHHhccCC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL--PVES----FSIDTVLSISSSHELPGDQLLEEISRVLKPG 88 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L--p~~~----~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG 88 (299)
..++..|+++.|++.|++++... ..++.++.+|+... .+.+ ++||+|++..... ....++.++.++|+||
T Consensus 95 ~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~--~~~~~l~~~~~~L~pg 172 (229)
T 2avd_A 95 GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKE--NCSAYYERCLQLLRPG 172 (229)
T ss_dssp CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCST--THHHHHHHHHHHEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHH--HHHHHHHHHHHHcCCC
Confidence 34556677888999998776543 35899999987543 1221 6899999865411 2457899999999999
Q ss_pred cEEEEEec
Q 022285 89 GTILIYKK 96 (299)
Q Consensus 89 G~l~i~~~ 96 (299)
|.+++.+.
T Consensus 173 G~lv~~~~ 180 (229)
T 2avd_A 173 GILAVLRV 180 (229)
T ss_dssp EEEEEECC
T ss_pred eEEEEECC
Confidence 99998764
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.54 E-value=0.0026 Score=61.19 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=58.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC--CCCCceeEEEecCc------cCCCCh---------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISS------SHELPG--------------- 74 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp--~~~~sfD~Vls~~~------~~~~~~--------------- 74 (299)
.++..|+++.++..+++++.....++.+..+|+..++ +++++||+|++... +++.+.
T Consensus 272 ~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~ 351 (429)
T 1sqg_A 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQ 351 (429)
T ss_dssp EEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHH
Confidence 3445566677788888777655556889999998886 66789999997421 121111
Q ss_pred --HHHHHHHHHhccCCcEEEEEecC
Q 022285 75 --DQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 75 --~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
..++.++++.|||||+|++.+-.
T Consensus 352 ~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 352 LQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECC
Confidence 37899999999999999987743
No 226
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.53 E-value=0.0045 Score=58.77 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=53.6
Q ss_pred ccCCCCCCCCCceeEEEecCccCCCC--hH--------------------------------HHHHHHHHhccCCcEEEE
Q 022285 48 SSLSQLPVESFSIDTVLSISSSHELP--GD--------------------------------QLLEEISRVLKPGGTILI 93 (299)
Q Consensus 48 gd~~~Lp~~~~sfD~Vls~~~~~~~~--~~--------------------------------~~L~ei~RvLKPGG~l~i 93 (299)
++...-.||+++||+|++++++||+. +. .+|+-.+|.|+|||++++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 45555789999999999999999976 21 237788999999999999
Q ss_pred EecCCCCccc-------hHHHHHHHHHHHHHCCceecee
Q 022285 94 YKKLTSDKGD-------VDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 94 ~~~~~~~~g~-------~~~~~~~l~~~L~laGFv~v~~ 125 (299)
.....++.+. +-....+.-+.|...|.+..+.
T Consensus 208 ~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek 246 (359)
T 1m6e_X 208 TILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEK 246 (359)
T ss_dssp EEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCST
T ss_pred EEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhh
Confidence 8776544321 1111222334556778776543
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.51 E-value=0.0026 Score=53.77 Aligned_cols=83 Identities=7% Similarity=-0.026 Sum_probs=57.5
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEEEe
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
++..|+++.|++.|++++. ++.++++|+..+| ++||+|+++..+|+.. ...+++++.++| |+.+.+..
T Consensus 77 v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 77 VTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp EEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEE
T ss_pred EEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEc
Confidence 5667888999999887654 7899999999875 6899999998888775 357899999999 55334333
Q ss_pred cCCCCccchHHHHHHHHHHHHHCC
Q 022285 96 KLTSDKGDVDKAISALEGKLLLAG 119 (299)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laG 119 (299)
+ +.. ..+...+..+|
T Consensus 148 ~-----~~~----~~~~~~~~~~g 162 (200)
T 1ne2_A 148 A-----KAR----DFLRREFSARG 162 (200)
T ss_dssp G-----GGH----HHHHHHHHHHE
T ss_pred C-----chH----HHHHHHHHHCC
Confidence 2 111 23455566677
No 228
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.49 E-value=0.013 Score=49.41 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=66.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++..|+++.|++.|++++.....++.++.+|+..+| .+||+|+++..+++.. ...++.++.++| ||.+++.
T Consensus 74 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 74 EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 3567788899999998876554338999999999875 4899999998877654 357889999999 5544433
Q ss_pred ecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 95 KKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 95 ~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
... ......+...+...||...
T Consensus 149 ~~~-------~~~~~~~~~~l~~~g~~~~ 170 (207)
T 1wy7_A 149 LAK-------PEVRRFIEKFSWEHGFVVT 170 (207)
T ss_dssp ECC-------HHHHHHHHHHHHHTTEEEE
T ss_pred eCC-------cCCHHHHHHHHHHCCCeEE
Confidence 111 1122345566788898643
No 229
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.42 E-value=0.00043 Score=69.16 Aligned_cols=82 Identities=10% Similarity=0.029 Sum_probs=67.0
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCC--CCCCCceeEEEecCccCCCC-h--HHHHHHHHHhccCCc
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL--PVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGG 89 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG 89 (299)
|+.||..|+++.+++.|+..+... ..++.|++++++++ ++++++||+|++.-+++|++ + -..+..+++.|+++|
T Consensus 88 ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 88 GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVT 167 (569)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhcccc
Confidence 778889999999999999766544 35899999999988 57788999999999999987 3 233556888899999
Q ss_pred EEEEEecC
Q 022285 90 TILIYKKL 97 (299)
Q Consensus 90 ~l~i~~~~ 97 (299)
..++....
T Consensus 168 ~~~~~~~~ 175 (569)
T 4azs_A 168 QAVILELA 175 (569)
T ss_dssp SEEEEECC
T ss_pred ceeeEEec
Confidence 98877654
No 230
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.40 E-value=0.00095 Score=58.85 Aligned_cols=78 Identities=12% Similarity=0.047 Sum_probs=57.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC-C-C-----CCCceeEEEecCccCCCChHHHHHHHHHhccC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPGDQLLEEISRVLKP 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~-----~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKP 87 (299)
..++..|+++.+.+.|+++++.. ..++.++.+|+..+ + + ++++||+|++..... ....++.++.++|||
T Consensus 96 ~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~--~~~~~l~~~~~~L~p 173 (237)
T 3c3y_A 96 GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKP--NYIKYHERLMKLVKV 173 (237)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGG--GHHHHHHHHHHHEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchH--HHHHHHHHHHHhcCC
Confidence 34555677788999998876543 34699999988653 2 2 257899999864311 146789999999999
Q ss_pred CcEEEEEec
Q 022285 88 GGTILIYKK 96 (299)
Q Consensus 88 GG~l~i~~~ 96 (299)
||.+++.+.
T Consensus 174 GG~lv~d~~ 182 (237)
T 3c3y_A 174 GGIVAYDNT 182 (237)
T ss_dssp EEEEEEECT
T ss_pred CeEEEEecC
Confidence 999988754
No 231
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.39 E-value=0.0075 Score=54.24 Aligned_cols=99 Identities=13% Similarity=0.031 Sum_probs=71.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+...|+++.+++.|+++++.. ..++.+..+|+.+...+...||+|++.-..- -....++.+..+.|+++|+|+++-.
T Consensus 48 V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg-~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 48 AIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG-TLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-HHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch-HHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 345688999999999887654 3469999999987765545699987642111 0124678888999999999998864
Q ss_pred CCCCccchHHHHHHHHHHHHHCCceeceeec
Q 022285 97 LTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (299)
Q Consensus 97 ~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (299)
.. ...++..|..+||..+++..
T Consensus 127 ~~---------~~~lr~~L~~~Gf~i~~E~l 148 (244)
T 3gnl_A 127 IA---------AWQLREWSEQNNWLITSEAI 148 (244)
T ss_dssp SC---------HHHHHHHHHHHTEEEEEEEE
T ss_pred CC---------hHHHHHHHHHCCCEEEEEEE
Confidence 31 12677889999999776543
No 232
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.32 E-value=0.008 Score=54.31 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=42.1
Q ss_pred CeEEE--eccCCCCCCCCCceeEEEecCccCCCC-h----H---HHHHHHHHhccCCc--EEEEEecC
Q 022285 42 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP-G----D---QLLEEISRVLKPGG--TILIYKKL 97 (299)
Q Consensus 42 ~i~~~--~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~----~---~~L~ei~RvLKPGG--~l~i~~~~ 97 (299)
++.++ ++|+..+| +++||+|++..+ ++.. . . .++.++.|+||||| .|++....
T Consensus 123 ~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 123 NIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 68888 89999876 789999999866 3322 1 1 37899999999999 99987765
No 233
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.26 E-value=0.0033 Score=61.64 Aligned_cols=80 Identities=20% Similarity=0.138 Sum_probs=58.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC-CCCCceeEEEecCc------cCCCC-----------------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISS------SHELP----------------- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~------~~~~~----------------- 73 (299)
.++..|+++.|++.++++++.....+.++.+|+..++ +.+++||+|++... ++..+
T Consensus 128 ~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~ 207 (464)
T 3m6w_A 128 LLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEV 207 (464)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHH
Confidence 4556688899999999887665333889999988776 34689999996321 11111
Q ss_pred hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
...++.+++++|||||+|++..-.
T Consensus 208 Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 208 QKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecc
Confidence 156899999999999999886543
No 234
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.22 E-value=0.0053 Score=58.30 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=67.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CC-CeEEEeccCCCC-CC---CCCceeEEEecCcc-----CCCC-----hHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC--DP-QIITQASSLSQL-PV---ESFSIDTVLSISSS-----HELP-----GDQLLEE 80 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~-~i~~~~gd~~~L-p~---~~~sfD~Vls~~~~-----~~~~-----~~~~L~e 80 (299)
.|+..|+++.|++.|+++++.. .. ++.++++|+... +. ...+||+|++.... .... ...++.+
T Consensus 237 ~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~ 316 (385)
T 2b78_A 237 ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQ 316 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHH
Confidence 4567788899999999877543 22 899999998653 31 24589999986543 1222 1346778
Q ss_pred HHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCce
Q 022285 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 81 i~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (299)
+.++|+|||.|++....... ..+.....+...+..+|+.
T Consensus 317 ~~~~L~pgG~l~~~~~~~~~--~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 317 GLEILSENGLIIASTNAANM--TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HHHTEEEEEEEEEEECCTTS--CHHHHHHHHHHHHTTCCCE
T ss_pred HHHhcCCCcEEEEEeCCCcC--CHHHHHHHHHHHHHHcCCc
Confidence 89999999999988754321 1222233445556677776
No 235
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.21 E-value=0.0043 Score=60.69 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=67.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC-CCCCceeEEEecCc---c---C--------CCC--------
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP-VESFSIDTVLSISS---S---H--------ELP-------- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~---~---~--------~~~-------- 73 (299)
.|+..|+++.+++.++++++.. ..++.+..+|+..++ +.+++||+|++... . . |.+
T Consensus 132 ~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~ 211 (456)
T 3m4x_A 132 LLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQK 211 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHH
Confidence 3445678888999998887654 457999999988775 34679999998542 1 1 100
Q ss_pred -hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 74 -GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
...++.++.++|||||+|++.+-.-...++ .. .+...|...||..
T Consensus 212 ~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEn-e~---vv~~~l~~~~~~l 257 (456)
T 3m4x_A 212 RQQEILSSAIKMLKNKGQLIYSTCTFAPEEN-EE---IISWLVENYPVTI 257 (456)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEESCCCGGGT-HH---HHHHHHHHSSEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeecccccC-HH---HHHHHHHhCCCEE
Confidence 126799999999999999876543221111 11 3445566677653
No 236
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.21 E-value=0.0084 Score=54.56 Aligned_cols=53 Identities=25% Similarity=0.274 Sum_probs=42.2
Q ss_pred CeEEE--eccCCCCCCCCCceeEEEecCccCCCC-h----H---HHHHHHHHhccCCc--EEEEEecC
Q 022285 42 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP-G----D---QLLEEISRVLKPGG--TILIYKKL 97 (299)
Q Consensus 42 ~i~~~--~gd~~~Lp~~~~sfD~Vls~~~~~~~~-~----~---~~L~ei~RvLKPGG--~l~i~~~~ 97 (299)
++.++ ++|+..+| +++||+|++..+ ++.. . . .++.++.|+||||| .|++....
T Consensus 131 ~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 131 NLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp GGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 78899 99999876 789999999876 3322 1 1 37899999999999 99987665
No 237
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.17 E-value=0.0018 Score=58.96 Aligned_cols=85 Identities=14% Similarity=0.118 Sum_probs=59.6
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~ 71 (299)
.+.+||-+-.|+ .++..|+++.|+..++++.... ..++.++.+|+..++++ +||+|+++..+++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPYQI 105 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCGGG
T ss_pred CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCccc
Confidence 455677765443 3445678889999998766432 25899999999988876 7999999876665
Q ss_pred CCh--HHHH--------------HHH--HHhccCCcEEE
Q 022285 72 LPG--DQLL--------------EEI--SRVLKPGGTIL 92 (299)
Q Consensus 72 ~~~--~~~L--------------~ei--~RvLKPGG~l~ 92 (299)
..+ ..++ .|+ .++|||||.++
T Consensus 106 ~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 106 SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 431 2222 233 37999999986
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.16 E-value=0.0042 Score=58.91 Aligned_cols=81 Identities=9% Similarity=-0.102 Sum_probs=59.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEeccCCCCCC----CCCceeEEEecCccCCC---------C-hHHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPV----ESFSIDTVLSISSSHEL---------P-GDQLLEEI 81 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~i~~~~gd~~~Lp~----~~~sfD~Vls~~~~~~~---------~-~~~~L~ei 81 (299)
.++..|+++.+++.|++++.... .++.++.+|+..+.. ...+||+|++....... . ...++.++
T Consensus 242 ~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T 2as0_A 242 EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAG 321 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 46677888999999988765432 279999999876532 25789999996543211 1 35688999
Q ss_pred HHhccCCcEEEEEecCC
Q 022285 82 SRVLKPGGTILIYKKLT 98 (299)
Q Consensus 82 ~RvLKPGG~l~i~~~~~ 98 (299)
.++|+|||.|++.....
T Consensus 322 ~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 322 LNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HTTEEEEEEEEEEECCT
T ss_pred HHhcCCCcEEEEEECCC
Confidence 99999999998876543
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.16 E-value=0.0069 Score=57.24 Aligned_cols=100 Identities=10% Similarity=-0.066 Sum_probs=66.1
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCC----CCCceeEEEecCccCCC---------C-hHHHHHHHHH
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV----ESFSIDTVLSISSSHEL---------P-GDQLLEEISR 83 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~----~~~sfD~Vls~~~~~~~---------~-~~~~L~ei~R 83 (299)
++..|+++.+++.|++++... ..++.++.+|+..+.. ...+||+|++....... . ...++.++.+
T Consensus 234 v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (382)
T 1wxx_A 234 VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIK 313 (382)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence 456688899999998876543 3459999999876532 25789999986532111 1 2468899999
Q ss_pred hccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCc
Q 022285 84 VLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGF 120 (299)
Q Consensus 84 vLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGF 120 (299)
+|+|||.|++........ .+.-...+...+..+|.
T Consensus 314 ~LkpgG~l~~~~~~~~~~--~~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 314 LLKEGGILATASCSHHMT--EPLFYAMVAEAAQDAHR 348 (382)
T ss_dssp TEEEEEEEEEEECCTTSC--HHHHHHHHHHHHHHTTC
T ss_pred hcCCCCEEEEEECCCCCC--HHHHHHHHHHHHHHcCC
Confidence 999999999887643211 11112234445666664
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.13 E-value=0.0055 Score=58.14 Aligned_cols=102 Identities=12% Similarity=0.025 Sum_probs=67.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--C-CeEEEeccCCCCCC----CCCceeEEEecCccC---------CCC-hHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCD--P-QIITQASSLSQLPV----ESFSIDTVLSISSSH---------ELP-GDQLLEE 80 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~-~i~~~~gd~~~Lp~----~~~sfD~Vls~~~~~---------~~~-~~~~L~e 80 (299)
.|+..|+++.+++.|++++.... . ++.++.+|+..+.. ....||+|++..... ... ...++.+
T Consensus 245 ~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~ 324 (396)
T 3c0k_A 245 QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINML 324 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHH
Confidence 45677888999999998775432 2 79999999876521 146899999975321 112 3578899
Q ss_pred HHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCce
Q 022285 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 81 i~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (299)
+.++|+|||.|++........ .+.-...+...+..+|+.
T Consensus 325 ~~~~LkpgG~l~~~~~~~~~~--~~~~~~~i~~~~~~~g~~ 363 (396)
T 3c0k_A 325 AIQLLNEGGILLTFSCSGLMT--SDLFQKIIADAAIDAGRD 363 (396)
T ss_dssp HHHTEEEEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCC
T ss_pred HHHhcCCCcEEEEEeCCCcCC--HHHHHHHHHHHHHHcCCe
Confidence 999999999999877543211 111122344456677753
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.04 E-value=0.0049 Score=57.34 Aligned_cols=87 Identities=13% Similarity=0.195 Sum_probs=65.8
Q ss_pred ccceEEEEecC-----------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSED-----------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~-----------~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.|.+||-+..| ..++..|+++.+++.|+++++.. ..++.++.+|+..+. .+||+|++.....
T Consensus 195 ~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~-- 269 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF-- 269 (336)
T ss_dssp TTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT--
T ss_pred CCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh--
Confidence 45566666443 24667788999999998876543 257999999998875 7899999864322
Q ss_pred ChHHHHHHHHHhccCCcEEEEEecCC
Q 022285 73 PGDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
...++.++.++|+|||.|++.....
T Consensus 270 -~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 270 -AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp -GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred -HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 2368899999999999999887654
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.90 E-value=0.003 Score=64.89 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=67.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc--C-CCeEEEeccCCC-CCCCCCceeEEEecCccC--------CCC----hHHHHHHHH
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--D-PQIITQASSLSQ-LPVESFSIDTVLSISSSH--------ELP----GDQLLEEIS 82 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~-~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~--------~~~----~~~~L~ei~ 82 (299)
|+..|+++.|++.|+++++.. . .++.++++|+.. ++....+||+|++..... .+. ...++.++.
T Consensus 565 V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~ 644 (703)
T 3v97_A 565 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 644 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHH
Confidence 667799999999999887543 2 479999999876 455568999999865321 111 256788999
Q ss_pred HhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCce
Q 022285 83 RVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 83 RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (299)
++|+|||.|++......-.-. ...+...||.
T Consensus 645 ~~LkpgG~L~~s~~~~~~~~~--------~~~l~~~g~~ 675 (703)
T 3v97_A 645 RLLRAGGTIMFSNNKRGFRMD--------LDGLAKLGLK 675 (703)
T ss_dssp HHEEEEEEEEEEECCTTCCCC--------HHHHHHTTEE
T ss_pred HhcCCCcEEEEEECCcccccC--------HHHHHHcCCc
Confidence 999999999977654221111 2346668887
No 243
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.83 E-value=0.013 Score=56.07 Aligned_cols=114 Identities=11% Similarity=-0.072 Sum_probs=70.6
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCC-CCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~L-p~~~~sfD~Vls~~~~~~~ 72 (299)
.|.+||-+..+ +.|+..|+++.|++.|+++++.......+.++|+..+ +...+.||+|++.......
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 36677776543 3466778999999999988754433345668887754 2213349999987543111
Q ss_pred ---------C-hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCce
Q 022285 73 ---------P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 73 ---------~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (299)
. ...++.++.++|||||.|++........ ...-...+...+..+|..
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~--~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR--LEDLLEVARRAAADLGRR 350 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC--HHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC--HHHHHHHHHHHHHHhCCe
Confidence 0 1468889999999999998776543211 111112344455556643
No 244
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.82 E-value=0.015 Score=51.59 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=68.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCC-CCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLS-QLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~-~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
+...|+++.+++.|+++++.. ..++.++.+|+. .++. ...||+|+..-.-.. ....++.+..+.|+|+|+|++.-
T Consensus 42 V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~Gg~-~i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 42 AIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITIAGMGGR-LIARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEECHH-HHHHHHHHTGGGCTTCCEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEEcCCChH-HHHHHHHHHHHHhCCCCEEEEEC
Confidence 345688999999999887654 347999999984 4442 226998886432111 13568888999999999998865
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCceeceee
Q 022285 96 KLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (299)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (299)
... ...++..|..+||..+++.
T Consensus 120 ~~~---------~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 120 NNR---------EDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp SSC---------HHHHHHHHHHTTEEEEEEE
T ss_pred CCC---------HHHHHHHHHHCCCEEEEEE
Confidence 421 1267788999999987664
No 245
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.81 E-value=0.016 Score=53.40 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=41.6
Q ss_pred CCeEEEec-cCCCCCCCCCceeEEEecCccC---CCC-hH---HHHHHHHHhccCCcEEEEEecC
Q 022285 41 PQIITQAS-SLSQLPVESFSIDTVLSISSSH---ELP-GD---QLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 41 ~~i~~~~g-d~~~Lp~~~~sfD~Vls~~~~~---~~~-~~---~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.++.++++ |+..+| ..+||+|++....+ +.. .. .+|.++.|+|||||.|++..+.
T Consensus 131 ~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 131 NLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred CCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 56889998 887775 56899999976543 221 11 4788999999999999987654
No 246
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.70 E-value=0.0097 Score=50.75 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=42.4
Q ss_pred CCeEEEeccCCCCCCC-----------CCceeEEEecCccCC----C-C-------hHHHHHHHHHhccCCcEEEEEecC
Q 022285 41 PQIITQASSLSQLPVE-----------SFSIDTVLSISSSHE----L-P-------GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 41 ~~i~~~~gd~~~Lp~~-----------~~sfD~Vls~~~~~~----~-~-------~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+++.++++|+.+.+.. .++||+|++...... . . ...++.++.++|||||.|++....
T Consensus 62 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 62 AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 5799999999886521 148999999653211 1 1 146788999999999999988765
Q ss_pred C
Q 022285 98 T 98 (299)
Q Consensus 98 ~ 98 (299)
.
T Consensus 142 ~ 142 (191)
T 3dou_A 142 G 142 (191)
T ss_dssp S
T ss_pred C
Confidence 3
No 247
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.68 E-value=0.013 Score=52.96 Aligned_cols=78 Identities=9% Similarity=-0.006 Sum_probs=62.9
Q ss_pred CCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCC---hHHHHHHHHHhccCCcEEE
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~ 92 (299)
...++..|+...|++.++.++.....+..+.++|....|++. +||+|+++-++|++. ...++ .+++.|+++|.++
T Consensus 126 ~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 126 IASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEE
Confidence 345557799999999999887666788899999999888655 899999998888775 33444 8999999998887
Q ss_pred EEe
Q 022285 93 IYK 95 (299)
Q Consensus 93 i~~ 95 (299)
-..
T Consensus 204 sfP 206 (253)
T 3frh_A 204 SFP 206 (253)
T ss_dssp EEE
T ss_pred EcC
Confidence 665
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.51 E-value=0.045 Score=52.59 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=65.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCC----CCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEE
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQ----LPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~----Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (299)
.++..|+++.|++.|++++... ..++.|+.+|+.. +|+++++||+|++....... ..++..+. .++|++.++
T Consensus 310 ~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~--~~~~~~l~-~~~p~~ivy 386 (433)
T 1uwv_A 310 SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA--AGVMQQII-KLEPIRIVY 386 (433)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC--HHHHHHHH-HHCCSEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH--HHHHHHHH-hcCCCeEEE
Confidence 3456688899999999877543 3589999999987 45677899999997654333 24555554 479999888
Q ss_pred EEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 93 IYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 93 i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
+.-. +.+...+ ...|...||.-...
T Consensus 387 vsc~-------p~tlard-~~~l~~~Gy~~~~~ 411 (433)
T 1uwv_A 387 VSCN-------PATLARD-SEALLKAGYTIARL 411 (433)
T ss_dssp EESC-------HHHHHHH-HHHHHHTTCEEEEE
T ss_pred EECC-------hHHHHhh-HHHHHHCCcEEEEE
Confidence 7532 2221122 24566689986543
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=95.43 E-value=0.0072 Score=57.46 Aligned_cols=91 Identities=16% Similarity=0.127 Sum_probs=63.8
Q ss_pred ccceEEEEecC-------------CccChHHHHHHHHHHHHHHhhhc------C---CCeEEEeccCCCCCC----CCCc
Q 022285 6 MQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC------D---PQIITQASSLSQLPV----ESFS 59 (299)
Q Consensus 6 ~~~~vLlL~~~-------------~~vt~~dlse~m~~~A~~~~~~~------~---~~i~~~~gd~~~Lp~----~~~s 59 (299)
+..+||.|-.+ ..++..|+.+.+.+.|+++.... . .++.++.+|+...-- ..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 35578888654 34567788899999999875421 1 279999999876432 3578
Q ss_pred eeEEEecCcc-C------CCChHHHHHHH----HHhccCCcEEEEEec
Q 022285 60 IDTVLSISSS-H------ELPGDQLLEEI----SRVLKPGGTILIYKK 96 (299)
Q Consensus 60 fD~Vls~~~~-~------~~~~~~~L~ei----~RvLKPGG~l~i~~~ 96 (299)
||+|+.-... . ++....+++.+ .++|+|||.+++...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 9999987533 1 11235677777 899999999988754
No 250
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.35 E-value=0.0098 Score=53.66 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.1
Q ss_pred CCeEEEeccCCC-CCCCCC----ceeEEEec-CccCCCC---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHH
Q 022285 41 PQIITQASSLSQ-LPVESF----SIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 111 (299)
Q Consensus 41 ~~i~~~~gd~~~-Lp~~~~----sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l 111 (299)
.++.+..+|+.. +|.-+. .||+|+.- ++-...| ...++.+++|.|+|||+|+.+... ..+
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa-----------~~v 218 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFV 218 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB-----------HHH
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC-----------HHH
Confidence 467788898876 453222 79999984 3221111 367999999999999999854321 156
Q ss_pred HHHHHHCCceec
Q 022285 112 EGKLLLAGFLDA 123 (299)
Q Consensus 112 ~~~L~laGFv~v 123 (299)
++.|..+||...
T Consensus 219 rr~L~~aGF~v~ 230 (257)
T 2qy6_A 219 RRGLQEAGFTMQ 230 (257)
T ss_dssp HHHHHHHTEEEE
T ss_pred HHHHHHCCCEEE
Confidence 788999999854
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.21 E-value=0.041 Score=52.36 Aligned_cols=80 Identities=11% Similarity=0.101 Sum_probs=62.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCC-CC----hHHHHHHHHHhccC--
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP----GDQLLEEISRVLKP-- 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~-~~----~~~~L~ei~RvLKP-- 87 (299)
..+...|+.+.|++.|++++... ...+.+.++|+.+++.+. +||+|+++-.+.. +. ...++.++.+.||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 34667899999999999887654 346999999999998754 8999999965432 21 35677788888887
Q ss_pred CcEEEEEecC
Q 022285 88 GGTILIYKKL 97 (299)
Q Consensus 88 GG~l~i~~~~ 97 (299)
||.+++....
T Consensus 336 g~~~~iit~~ 345 (384)
T 3ldg_A 336 TWSQFILTND 345 (384)
T ss_dssp TSEEEEEESC
T ss_pred CcEEEEEECC
Confidence 9999888764
No 252
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=95.20 E-value=0.023 Score=51.87 Aligned_cols=114 Identities=9% Similarity=0.009 Sum_probs=75.4
Q ss_pred ccccceEEEEecCC-------------ccChHHHHHHHHHHHHHHhhh--cCCCeEEEeccCCCCCCCCCceeEEEecCc
Q 022285 4 GKMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISS 68 (299)
Q Consensus 4 ~~~~~~vLlL~~~~-------------~vt~~dlse~m~~~A~~~~~~--~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~ 68 (299)
.+.|.+||-+..|+ .|...|+.+...+.++++++. ...++.+..+|+..++ ....||.|+.+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC
Confidence 45567777765433 233447777788888877643 3467999999998876 4678999998753
Q ss_pred cCCCChHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
.. ...++..+.++|||||.+++........ ......+.+++.+...||..
T Consensus 202 ~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~-~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 202 VR---THEFIPKALSIAKDGAIIHYHNTVPEKL-MPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp SS---GGGGHHHHHHHEEEEEEEEEEEEEEGGG-TTTTTHHHHHHHHHHTTCEE
T ss_pred Cc---HHHHHHHHHHHcCCCCEEEEEeeecccc-cchhHHHHHHHHHHHcCCcE
Confidence 21 3467888999999999998876543211 01111235556677888864
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=95.12 E-value=0.031 Score=53.30 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=60.8
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCC-CC----hHHHHHHHHHhccC--
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP----GDQLLEEISRVLKP-- 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~-~~----~~~~L~ei~RvLKP-- 87 (299)
..+...|+.+.|++.|+.++... ..++.++++|+.+++.+ .+||+|+++..+.. +. ...++.++.++||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 34678899999999999887654 34699999999999875 48999999965432 11 24567777777776
Q ss_pred CcEEEEEecC
Q 022285 88 GGTILIYKKL 97 (299)
Q Consensus 88 GG~l~i~~~~ 97 (299)
||.+++....
T Consensus 343 g~~~~iit~~ 352 (393)
T 3k0b_A 343 TWSVYVLTSY 352 (393)
T ss_dssp TCEEEEEECC
T ss_pred CCEEEEEECC
Confidence 9999887754
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.07 E-value=0.025 Score=54.53 Aligned_cols=77 Identities=13% Similarity=0.056 Sum_probs=55.5
Q ss_pred cChHHHHHHHHHHHHHHhhhcCC---CeEEEeccCCCCCCCCCceeEEEecCccCCCC------------------hHHH
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDP---QIITQASSLSQLPVESFSIDTVLSISSSHELP------------------GDQL 77 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~---~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~------------------~~~~ 77 (299)
+...|+.+.+.+.|+.++..... ++.+..+|....+.. ..||+|+++..++... ...+
T Consensus 211 i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~f 289 (445)
T 2okc_A 211 LHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNF 289 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHH
Confidence 44556677888888766533222 677888988877654 3899999986544321 1368
Q ss_pred HHHHHHhccCCcEEEEEec
Q 022285 78 LEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 78 L~ei~RvLKPGG~l~i~~~ 96 (299)
++++++.|||||++.+..+
T Consensus 290 l~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 290 LQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhccCCEEEEEEC
Confidence 9999999999999987765
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.93 E-value=0.04 Score=53.09 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=53.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.++..|+++.|++.|++++......+.+..+|+..+.. . +||+|++........ ..+++.+ +.|+|||.+++.-
T Consensus 314 ~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~g~~-~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 314 NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPRAGLH-PRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTTCSC-HHHHHHH-HHHCCSEEEEEES
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCccchH-HHHHHHH-HhcCCCcEEEEEC
Confidence 45567889999999998765432229999999998753 2 899999976533222 3455555 4599999999864
No 256
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=94.91 E-value=0.18 Score=46.47 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=56.0
Q ss_pred cChHHHHHHHHHHHHHHhh------hcCCCeEEEeccCCCC-CCCCCceeEEEecCccC-----CCChHHHHHHHHHhcc
Q 022285 19 LPVSAVLNAIRDLGDEAVE------QCDPQIITQASSLSQL-PVESFSIDTVLSISSSH-----ELPGDQLLEEISRVLK 86 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~------~~~~~i~~~~gd~~~L-p~~~~sfD~Vls~~~~~-----~~~~~~~L~ei~RvLK 86 (299)
+++.|+-+++.+.+++... ..++++..+.+|+... --..++||+|+.-..-. .+-...+++.+.|+|+
T Consensus 110 v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~ 189 (294)
T 3o4f_A 110 ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLN 189 (294)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEE
T ss_pred EEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhC
Confidence 3445666778888876542 2368999999988754 34567899999765321 1224689999999999
Q ss_pred CCcEEEEEec
Q 022285 87 PGGTILIYKK 96 (299)
Q Consensus 87 PGG~l~i~~~ 96 (299)
|||.++.+..
T Consensus 190 p~Gv~v~q~~ 199 (294)
T 3o4f_A 190 PGGIFVAQNG 199 (294)
T ss_dssp EEEEEEEEEE
T ss_pred CCCEEEEecC
Confidence 9999998743
No 257
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=94.71 E-value=0.058 Score=49.34 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=73.0
Q ss_pred CCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCCh---HHHHHHHHHhccCCcEEE
Q 022285 16 DKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~ 92 (299)
.+.+...|+.+.|++.++.++........+.+.|...-+ +...||+|+++-++|++.. ...+ +++..|+|+|.|+
T Consensus 156 ~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 156 ETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp TCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEE
Confidence 344557799999999999888776667888888887655 5778999999998888862 3566 9999999999998
Q ss_pred EEec--CCCCccchHHH-HHHHHHHHHHCCce
Q 022285 93 IYKK--LTSDKGDVDKA-ISALEGKLLLAGFL 121 (299)
Q Consensus 93 i~~~--~~~~~g~~~~~-~~~l~~~L~laGFv 121 (299)
-.+. ..+........ ...|+..+...|..
T Consensus 234 Sfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 234 TFPTKSLGQRSKGMFQNYSQSFESQARERSCR 265 (281)
T ss_dssp EEECC-------CHHHHHHHHHHHHHHHHTCC
T ss_pred eccchhhcCCCcchhhHHHHHHHHHHHhcCCc
Confidence 6655 22111112222 23556667777773
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.58 E-value=0.048 Score=51.81 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=61.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCCCCCCceeEEEecCccCCCC-----hHHHHHHHHHhccC--
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKP-- 87 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLKP-- 87 (299)
..+...|+.+.|++.|+.++... ..++.+.++|+..++.+ .+||+|+++-.+..-. ...++.++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 45678899999999999887553 34799999999998864 5899999987654211 35677888888887
Q ss_pred CcEEEEEecC
Q 022285 88 GGTILIYKKL 97 (299)
Q Consensus 88 GG~l~i~~~~ 97 (299)
||.+++....
T Consensus 337 g~~~~iit~~ 346 (385)
T 3ldu_A 337 NWSYYLITSY 346 (385)
T ss_dssp SCEEEEEESC
T ss_pred CCEEEEEECC
Confidence 9999887654
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=93.79 E-value=0.037 Score=50.52 Aligned_cols=65 Identities=6% Similarity=-0.107 Sum_probs=43.9
Q ss_pred ccceEEEEecC------------CccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCCCceeEEEecCccCCC
Q 022285 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~------------~~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~ 72 (299)
.+.+||-+--| ..++..|+++.|+..+++++... ..++.++.+|+..++++ +||+|+++...++.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIPYKIS 119 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECCGGGH
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCCcccc
Confidence 35567766443 34556788899999998776432 36899999999988764 89999998766653
No 260
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.05 E-value=0.048 Score=49.63 Aligned_cols=89 Identities=20% Similarity=0.199 Sum_probs=54.3
Q ss_pred CCeEEEeccCCC-CC-CCCCceeEEEecCccCCC--------------------C-hHHHHHHHHHhccCCcEEEEEecC
Q 022285 41 PQIITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------------P-GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 41 ~~i~~~~gd~~~-Lp-~~~~sfD~Vls~~~~~~~--------------------~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.++.++++|..+ ++ +++++||+|++.-.+... . ...++.++.|+|||||.|++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 467788898776 33 568899999998654311 0 135778999999999999877432
Q ss_pred CC----Cccc--hHHHHHHHHHHHHHCCceecee-eccc
Q 022285 98 TS----DKGD--VDKAISALEGKLLLAGFLDAQR-IQLK 129 (299)
Q Consensus 98 ~~----~~g~--~~~~~~~l~~~L~laGFv~v~~-~~~k 129 (299)
.. ..+. .-.....+...+..+||..... .|.+
T Consensus 100 ~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 100 VAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp EEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred CccccccCCcccccccHHHHHHHHHHcCCeeeccEEEeC
Confidence 10 0010 0001124556678899976543 3544
No 261
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=92.64 E-value=0.0025 Score=56.25 Aligned_cols=87 Identities=13% Similarity=0.096 Sum_probs=52.9
Q ss_pred ccceEEEEecCCcc------------ChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCC-CceeEEEecCccCCC
Q 022285 6 MQSAVLALSEDKIL------------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHEL 72 (299)
Q Consensus 6 ~~~~vLlL~~~~~v------------t~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~~~ 72 (299)
.+++||-+-.|... +..|+++.|+..+++++. ...++.++.+|+.++++++ ++| .|+++..++..
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcccCCCc-EEEEeCCcccc
Confidence 45677777555433 333455555555544332 2357899999999999874 689 67776543321
Q ss_pred C------------hHHHH----HHHHHhccCCcEEEEE
Q 022285 73 P------------GDQLL----EEISRVLKPGGTILIY 94 (299)
Q Consensus 73 ~------------~~~~L----~ei~RvLKPGG~l~i~ 94 (299)
. ...++ +.+.|+|+|||.|++.
T Consensus 107 ~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 107 TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 1 11223 5578888888877643
No 262
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=92.61 E-value=0.4 Score=44.83 Aligned_cols=80 Identities=20% Similarity=0.163 Sum_probs=52.4
Q ss_pred CCeEEEeccCCCCCCCCCceeEEEecCccC---C-------CCh--------------------HHHHHHHHHhccCCcE
Q 022285 41 PQIITQASSLSQLPVESFSIDTVLSISSSH---E-------LPG--------------------DQLLEEISRVLKPGGT 90 (299)
Q Consensus 41 ~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~---~-------~~~--------------------~~~L~ei~RvLKPGG~ 90 (299)
.++.+.++|+...+ +...||+|+++-.+. . +.. ..++.++.++|+|||+
T Consensus 81 ~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 81 PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCE
Confidence 46888999988765 356899999974322 1 111 1568899999999999
Q ss_pred EEEEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 91 ILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 91 l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
+++..+..--... ....++..+...|+..+.
T Consensus 160 ~~~i~p~~~l~~~---~~~~lr~~l~~~~~~~i~ 190 (421)
T 2ih2_A 160 LVFVVPATWLVLE---DFALLREFLAREGKTSVY 190 (421)
T ss_dssp EEEEEEGGGGTCG---GGHHHHHHHHHHSEEEEE
T ss_pred EEEEEChHHhcCc---cHHHHHHHHHhcCCeEEE
Confidence 9887664210011 123566777777874443
No 263
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=91.42 E-value=0.49 Score=43.18 Aligned_cols=56 Identities=20% Similarity=0.196 Sum_probs=41.7
Q ss_pred CeEEEeccCCCCCCCCCceeEEEecCccC----CCCh---HHHHHHHHHhccCC-cEEEEEecC
Q 022285 42 QIITQASSLSQLPVESFSIDTVLSISSSH----ELPG---DQLLEEISRVLKPG-GTILIYKKL 97 (299)
Q Consensus 42 ~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~----~~~~---~~~L~ei~RvLKPG-G~l~i~~~~ 97 (299)
++.....+++...++...||+|++-.+.+ +... -.++..+.++|||| |.|++..+.
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 55566666666778889999999976544 3331 23578889999999 999997765
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=90.62 E-value=0.41 Score=41.60 Aligned_cols=75 Identities=11% Similarity=-0.047 Sum_probs=50.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhc----CCCeEEEeccCCC---------------CC--------C-CCCceeEEEecCc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC----DPQIITQASSLSQ---------------LP--------V-ESFSIDTVLSISS 68 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~----~~~i~~~~gd~~~---------------Lp--------~-~~~sfD~Vls~~~ 68 (299)
..++..|..+++.+.|+++.++. ..++.++.+++.. ++ + ...+||+|+.-..
T Consensus 52 g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 52 KHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 44444555667777777766553 3478899998653 22 2 2368999998753
Q ss_pred cCCCChHHHHHHHHHhccCCcEEEEEe
Q 022285 69 SHELPGDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
.. ...+..+.+.|+|||.+++-+
T Consensus 132 k~----~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 132 FR----VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp SH----HHHHHHHHHHCSSCEEEEETT
T ss_pred Cc----hhHHHHHHHhcCCCeEEEEeC
Confidence 22 345666789999999996544
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=90.58 E-value=0.39 Score=49.11 Aligned_cols=80 Identities=18% Similarity=0.078 Sum_probs=56.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCC--CCCCCceeEEEecCccCC-C--C--hHHHH---HHHHHh
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL--PVESFSIDTVLSISSSHE-L--P--GDQLL---EEISRV 84 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~L--p~~~~sfD~Vls~~~~~~-~--~--~~~~L---~ei~Rv 84 (299)
..+...|+.+.|++.|+.++... ...+.+.++|+..+ |+..+.||+|+++-.+.. + . ...++ .++++.
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 35667889999999999887654 34589999999887 444458999999965432 1 1 23334 445555
Q ss_pred ccCCcEEEEEec
Q 022285 85 LKPGGTILIYKK 96 (299)
Q Consensus 85 LKPGG~l~i~~~ 96 (299)
+.|||++++...
T Consensus 337 ~~~g~~~~ilt~ 348 (703)
T 3v97_A 337 QFGGWNLSLFSA 348 (703)
T ss_dssp HCTTCEEEEEES
T ss_pred hCCCCeEEEEeC
Confidence 668999988754
No 266
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.48 E-value=0.22 Score=45.92 Aligned_cols=84 Identities=17% Similarity=0.055 Sum_probs=51.8
Q ss_pred CCeEEEeccCCC-CC-CCCCceeEEEecCccCCC--------------C-hHHHHHHHHHhccCCcEEEEEecCCCCccc
Q 022285 41 PQIITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------P-GDQLLEEISRVLKPGGTILIYKKLTSDKGD 103 (299)
Q Consensus 41 ~~i~~~~gd~~~-Lp-~~~~sfD~Vls~~~~~~~--------------~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~ 103 (299)
....++.+|... |. +++++||+|++.-.+... . ....+.+++|+|||||.+++.....-..+.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC
Confidence 456777887653 43 568899999997543211 1 357889999999999999887543200011
Q ss_pred ---hHHHHHHHHHHHHHCCceece
Q 022285 104 ---VDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 104 ---~~~~~~~l~~~L~laGFv~v~ 124 (299)
....+..+...+...||.-..
T Consensus 93 ~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 93 PARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp EEECCHHHHHHHHHHHTTCCEEEE
T ss_pred cccccchHHHHHHHHHhCCCEEEE
Confidence 001122333456778996543
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=90.25 E-value=0.44 Score=43.79 Aligned_cols=78 Identities=5% Similarity=-0.114 Sum_probs=52.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCCCCC---CceeEEEecCc-----c-C------C----CC----
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVES---FSIDTVLSISS-----S-H------E----LP---- 73 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp~~~---~sfD~Vls~~~-----~-~------~----~~---- 73 (299)
.|+..|+.+.+++.++++++.. ..++.++.+|+..++... .+||.|++... . . | .+
T Consensus 129 ~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~ 208 (309)
T 2b9e_A 129 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLH 208 (309)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHH
Confidence 4556678888999998887664 358999999998876432 57999997321 1 0 1 00
Q ss_pred -----hHHHHHHHHHhccCCcEEEEEec
Q 022285 74 -----GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 74 -----~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
...+|..+++.|+ ||+|+...-
T Consensus 209 ~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 209 ALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp HHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred HHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 0246777778887 998876643
No 268
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.24 E-value=0.26 Score=45.68 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=49.2
Q ss_pred CeEEEeccCCC-CC-CCCCceeEEEec-CccCCCC---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHH
Q 022285 42 QIITQASSLSQ-LP-VESFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKL 115 (299)
Q Consensus 42 ~i~~~~gd~~~-Lp-~~~~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L 115 (299)
.+.+..+|+.. ++ +++..||+|+.- |+-..-| ...++++++|.++|||+|.-.... ..+++.|
T Consensus 167 ~L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa-----------g~VRR~L 235 (308)
T 3vyw_A 167 SLKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS-----------LSVRKSL 235 (308)
T ss_dssp EEEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC-----------HHHHHHH
T ss_pred EEEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc-----------HHHHHHH
Confidence 34566777753 33 445589999974 2222222 368999999999999999733221 1678899
Q ss_pred HHCCceece
Q 022285 116 LLAGFLDAQ 124 (299)
Q Consensus 116 ~laGFv~v~ 124 (299)
..+||....
T Consensus 236 ~~aGF~V~k 244 (308)
T 3vyw_A 236 LTLGFKVGS 244 (308)
T ss_dssp HHTTCEEEE
T ss_pred HHCCCEEEe
Confidence 999998643
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=90.18 E-value=0.23 Score=49.24 Aligned_cols=100 Identities=11% Similarity=-0.021 Sum_probs=62.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCC-----eEEEeccCCCCC-CCCCceeEEEecCccCCCC---------------hHH
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC-DPQ-----IITQASSLSQLP-VESFSIDTVLSISSSHELP---------------GDQ 76 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~-----i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~~~~---------------~~~ 76 (299)
+...|+.+.+.+.|+.++.-. ... +.+..+|....+ .+...||+|+++..+.... ...
T Consensus 214 i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~ 293 (541)
T 2ar0_A 214 FIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLC 293 (541)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHH
Confidence 446677788888887654322 222 667888876543 4457899999986543211 136
Q ss_pred HHHHHHHhccCCcEEEEEecCCC-CccchHHHHHHHHHHHHHCCce
Q 022285 77 LLEEISRVLKPGGTILIYKKLTS-DKGDVDKAISALEGKLLLAGFL 121 (299)
Q Consensus 77 ~L~ei~RvLKPGG~l~i~~~~~~-~~g~~~~~~~~l~~~L~laGFv 121 (299)
++.++.+.|||||++.+..+..- ..+. ....+++.|...+.+
T Consensus 294 Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~---~~~~iR~~L~~~~~l 336 (541)
T 2ar0_A 294 FMQHIIETLHPGGRAAVVVPDNVLFEGG---KGTDIRRDLMDKCHL 336 (541)
T ss_dssp HHHHHHHHEEEEEEEEEEEEHHHHHCCT---HHHHHHHHHHHHEEE
T ss_pred HHHHHHHHhCCCCEEEEEecCcceecCc---HHHHHHHHHhhcCCE
Confidence 89999999999999987765310 0011 123566666665544
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=90.06 E-value=0.12 Score=49.12 Aligned_cols=75 Identities=11% Similarity=0.003 Sum_probs=53.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc---------------C-CCeEEEeccCCCCCC-CCCceeEEEecCccCCCChHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC---------------D-PQIITQASSLSQLPV-ESFSIDTVLSISSSHELPGDQLLEE 80 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~---------------~-~~i~~~~gd~~~Lp~-~~~sfD~Vls~~~~~~~~~~~~L~e 80 (299)
.|+..|+.+.+.+.++++++.. . .++.+..+|+..+.. ....||+|+..- . .....++..
T Consensus 73 ~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lDP-~--~~~~~~l~~ 149 (378)
T 2dul_A 73 EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDP-F--GSPMEFLDT 149 (378)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECC-S--SCCHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeCC-C--CCHHHHHHH
Confidence 3556677888888888776543 2 248889998876531 135799999643 1 123678999
Q ss_pred HHHhccCCcEEEEEe
Q 022285 81 ISRVLKPGGTILIYK 95 (299)
Q Consensus 81 i~RvLKPGG~l~i~~ 95 (299)
+.+.|||||.|++.-
T Consensus 150 a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 150 ALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEEe
Confidence 999999999888764
No 271
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=88.73 E-value=0.2 Score=44.15 Aligned_cols=63 Identities=5% Similarity=0.094 Sum_probs=44.8
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCC-CceeEEEecCccC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSH 70 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~-~sfD~Vls~~~~~ 70 (299)
.+.+||-+-.|+ .++..|+++.|+..++++... ..++.++.+|+.++++++ ..| .|+++..++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCCcccCCCe-EEEEeCCcc
Confidence 456777775543 345568888999998876643 468999999999999875 456 566665444
No 272
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=88.16 E-value=0.37 Score=45.06 Aligned_cols=74 Identities=7% Similarity=0.066 Sum_probs=53.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEeccCCCCC--CCC--------------CceeEEEecCccCCCChHHHHHH
Q 022285 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VES--------------FSIDTVLSISSSHELPGDQLLEE 80 (299)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~i~~~~gd~~~Lp--~~~--------------~sfD~Vls~~~~~~~~~~~~L~e 80 (299)
.|+..|+++.|++.|+++++.. ..++.++.+|+..+. +.. ..||+|+...... .+..+
T Consensus 237 ~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~ 311 (369)
T 3bt7_A 237 RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSE 311 (369)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc-----ccHHH
Confidence 4567789999999999877543 358999999987652 222 3799999764322 23456
Q ss_pred HHHhccCCcEEEEEec
Q 022285 81 ISRVLKPGGTILIYKK 96 (299)
Q Consensus 81 i~RvLKPGG~l~i~~~ 96 (299)
+.+.|+++|++++..-
T Consensus 312 ~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 312 TEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHHTTSSEEEEEES
T ss_pred HHHHHhCCCEEEEEEC
Confidence 7788889999977654
No 273
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=88.14 E-value=0.38 Score=44.08 Aligned_cols=65 Identities=11% Similarity=0.081 Sum_probs=49.3
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCC
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~ 71 (299)
.+++||-+-.|+ .|+..|+.+.|...++++.. ...++.++.+|+..+++++..||+|+++..+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCcccCCccEEEEeCcccc
Confidence 355677765543 34455777888888887665 357899999999999999889999998876554
No 274
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=87.36 E-value=0.3 Score=46.58 Aligned_cols=74 Identities=12% Similarity=0.058 Sum_probs=52.1
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CC-C-eEEEeccCCCCC--CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEE
Q 022285 19 LPVSAVLNAIRDLGDEAVEQC-DP-Q-IITQASSLSQLP--VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~-~-i~~~~gd~~~Lp--~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (299)
|+..|+.+...+.++++++.. .. + +.++.+|+..+- .-...||+|+..- . -....++..+.+.|+|||.|++
T Consensus 80 V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP-~--g~~~~~l~~a~~~Lk~gGll~~ 156 (392)
T 3axs_A 80 AYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP-F--GTPVPFIESVALSMKRGGILSL 156 (392)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC-S--SCCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC-C--cCHHHHHHHHHHHhCCCCEEEE
Confidence 345566678888888777543 22 3 899999875431 1145799999875 1 1135689999999999998887
Q ss_pred Ee
Q 022285 94 YK 95 (299)
Q Consensus 94 ~~ 95 (299)
.-
T Consensus 157 t~ 158 (392)
T 3axs_A 157 TA 158 (392)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 275
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=86.64 E-value=1.5 Score=38.82 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=41.5
Q ss_pred CCCCceeEEEecCccCCC--------------C-hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCC
Q 022285 55 VESFSIDTVLSISSSHEL--------------P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG 119 (299)
Q Consensus 55 ~~~~sfD~Vls~~~~~~~--------------~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG 119 (299)
+++++||+|+.--....- . ....+.+++|+|+|||.+++... .. ....+...+...|
T Consensus 19 l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~------d~--~~~~~~~~~~~~g 90 (260)
T 1g60_A 19 VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT------PF--NCAFICQYLVSKG 90 (260)
T ss_dssp SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC------HH--HHHHHHHHHHHTT
T ss_pred ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC------cH--HHHHHHHHHHhhc
Confidence 346788888876542211 1 35678899999999999988741 11 1123445667789
Q ss_pred ceece-eeccc
Q 022285 120 FLDAQ-RIQLK 129 (299)
Q Consensus 120 Fv~v~-~~~~k 129 (299)
|.-.. ..|.+
T Consensus 91 f~~~~~iiW~K 101 (260)
T 1g60_A 91 MIFQNWITWDK 101 (260)
T ss_dssp CEEEEEEEECC
T ss_pred cceeEEEEEEe
Confidence 96443 33444
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=86.24 E-value=0.91 Score=45.03 Aligned_cols=102 Identities=10% Similarity=0.010 Sum_probs=62.6
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeEEEeccCCCCC-CCCCceeEEEecCccCC-------------------------
Q 022285 20 PVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSHE------------------------- 71 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~~~~------------------------- 71 (299)
...|+.+.+...|+.++... ..++.+..+|....| ++...||+|+++-.+..
T Consensus 287 ~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~ 366 (544)
T 3khk_A 287 YGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRIL 366 (544)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEEC
T ss_pred EEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccc
Confidence 34566677777777654322 233433667755444 55679999999864331
Q ss_pred CCh-----HHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 72 LPG-----DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 72 ~~~-----~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
+++ -.+++++.+.|||||++.+..+...-... ......+++.|...+.+.
T Consensus 367 ~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~-~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 367 TPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN-TNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp CCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC-GGGHHHHHHHHHHTTCEE
T ss_pred cCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcC-cchHHHHHHHHHhCCcHh
Confidence 221 25899999999999999877653110000 012236778888888765
No 277
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=80.14 E-value=2.2 Score=40.53 Aligned_cols=88 Identities=14% Similarity=0.055 Sum_probs=57.0
Q ss_pred ceEEEEecCCc-------------cChHHHHHHHHHHHHHHhhh---------cCCCeEEEeccCCCC----CCCCCcee
Q 022285 8 SAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQ---------CDPQIITQASSLSQL----PVESFSID 61 (299)
Q Consensus 8 ~~vLlL~~~~~-------------vt~~dlse~m~~~A~~~~~~---------~~~~i~~~~gd~~~L----p~~~~sfD 61 (299)
.+||+|-.|.- +++.|+-+++.+.+++.... ..+++..+.+|+... +-..+.||
T Consensus 207 krVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yD 286 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFD 286 (381)
T ss_dssp CEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEE
T ss_pred CeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCcee
Confidence 47888865543 34445667888888875321 124578888887533 11346799
Q ss_pred EEEecCccCC-------CC----hHHHHHHHHHhccCCcEEEEEe
Q 022285 62 TVLSISSSHE-------LP----GDQLLEEISRVLKPGGTILIYK 95 (299)
Q Consensus 62 ~Vls~~~~~~-------~~----~~~~L~ei~RvLKPGG~l~i~~ 95 (299)
+|+.-..-.. .. ...+++.+.++|+|||.++.+.
T Consensus 287 vIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 287 YVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9997632111 11 2567888999999999998763
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=78.13 E-value=5.5 Score=39.39 Aligned_cols=101 Identities=17% Similarity=0.040 Sum_probs=65.8
Q ss_pred ChHHHHHHHHHHHHHHhhhc-C--CCeEEEeccCCCC--C-CCCCceeEEEecCcc--CC-----------------CC-
Q 022285 20 PVSAVLNAIRDLGDEAVEQC-D--PQIITQASSLSQL--P-VESFSIDTVLSISSS--HE-----------------LP- 73 (299)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~-~--~~i~~~~gd~~~L--p-~~~~sfD~Vls~~~~--~~-----------------~~- 73 (299)
...|+...+...|+.++.-. . .++.+..+|.... | +....||+|+++-.+ .| ++
T Consensus 252 ~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~ 331 (542)
T 3lkd_A 252 FGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAP 331 (542)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCC
T ss_pred EEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCC
Confidence 35567778888887664322 1 4677888887765 4 456789999998432 11 11
Q ss_pred ----hHHHHHHHHHhcc-CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 74 ----GDQLLEEISRVLK-PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 74 ----~~~~L~ei~RvLK-PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
.-.++.++.+.|| |||++.+..+..--... .....+++.|...+.+.
T Consensus 332 ~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~--~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 332 KSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRG--NAEGTIRKALLEEGAID 383 (542)
T ss_dssp TTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCC--THHHHHHHHHHHTTCEE
T ss_pred CchhhHHHHHHHHHHhCCCceeEEEEecchHhhCC--chhHHHHHHHHhCCcee
Confidence 1247999999999 99999877654210000 12346788888888765
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=76.48 E-value=3.8 Score=41.55 Aligned_cols=51 Identities=20% Similarity=0.247 Sum_probs=39.2
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCc----cCCCChHHHHHHHHHhccCCcEEE
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISS----SHELPGDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~----~~~~~~~~~L~ei~RvLKPGG~l~ 92 (299)
...|+++.++++.+.+| +.+|+|++-.. +...-+ .++....|.|||||.++
T Consensus 410 ~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 410 GSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp GGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred CCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 56899999999998876 58999999652 112113 57777889999999985
No 280
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=75.35 E-value=2.2 Score=39.18 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=38.0
Q ss_pred eEEE-eccCCC-C-CCCCCceeEEEecCccCC-----------CC-hHHHHHHHHHhccCCcEEEEEec
Q 022285 43 IITQ-ASSLSQ-L-PVESFSIDTVLSISSSHE-----------LP-GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 43 i~~~-~gd~~~-L-p~~~~sfD~Vls~~~~~~-----------~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
.... .+|... | .+++++||+|+.--.... +. ....+.++.|+|+|||.+++...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4455 777653 2 246789999998754321 11 35678899999999999988754
No 281
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=74.38 E-value=3.4 Score=37.53 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=47.9
Q ss_pred HHHHHHHHhhhc---CCCeEEEeccCC-CCC-CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEec
Q 022285 28 IRDLGDEAVEQC---DPQIITQASSLS-QLP-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 28 m~~~A~~~~~~~---~~~i~~~~gd~~-~Lp-~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+.+.++++.++. ..++.++.|++. .|| ++...||+|+.-... +-+....|..+++.|+|||.+++-+.
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 445556555443 268999999876 344 445789999987642 12234688999999999999987665
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=73.21 E-value=3.1 Score=42.78 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=40.8
Q ss_pred cCCCeEEEeccCCCCCCC-----CCceeEEEecCccCCC---ChHHHHHHHHHhccCCcEEE
Q 022285 39 CDPQIITQASSLSQLPVE-----SFSIDTVLSISSSHEL---PGDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 39 ~~~~i~~~~gd~~~Lp~~-----~~sfD~Vls~~~~~~~---~~~~~L~ei~RvLKPGG~l~ 92 (299)
....|.++.++++.+.++ ...+|+|++-..-... .....|.-+.|.|||||.++
T Consensus 470 ~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 470 WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 356799999999998774 6789999997632211 13457778889999999875
No 283
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=72.04 E-value=1.7 Score=50.65 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=16.1
Q ss_pred CCCCceeEEEecCccCCCC-hHHHHHHHHHhccCCcEEEEEec
Q 022285 55 VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (299)
Q Consensus 55 ~~~~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (299)
+...+||+|++..++|-.+ ....+..++++|||||++++.+.
T Consensus 1307 ~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1307 GSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -----CCEEEEECC--------------------CCEEEEEEC
T ss_pred CCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 3456899999998888655 56789999999999999988764
No 284
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=71.06 E-value=0.78 Score=41.16 Aligned_cols=73 Identities=11% Similarity=-0.037 Sum_probs=42.4
Q ss_pred CccChHHHHHHHHHHHHHHhhh----------cCCCeEEEeccCCC-CCCCCCceeEEEecCccCCCChHHHHHHHHHhc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQ----------CDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISRVL 85 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~----------~~~~i~~~~gd~~~-Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvL 85 (299)
..|+..|.++.+...++++++. ...+++++.+|+.. ++.-...||+|+....+.+-....++.+..++|
T Consensus 111 ~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~l 190 (258)
T 2oyr_A 111 CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVF 190 (258)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHH
Confidence 3455556666655554433221 11468999999876 342234799999987665533345677788888
Q ss_pred cCCc
Q 022285 86 KPGG 89 (299)
Q Consensus 86 KPGG 89 (299)
++.+
T Consensus 191 r~l~ 194 (258)
T 2oyr_A 191 QSLV 194 (258)
T ss_dssp HHHS
T ss_pred HHhh
Confidence 8766
No 285
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=70.91 E-value=0.34 Score=43.27 Aligned_cols=71 Identities=8% Similarity=-0.124 Sum_probs=38.8
Q ss_pred CccChHHHHH-------HHHHHHHHHhhhc--CCCeEEEeccCCCC-C-CCC--CceeEEEecCccCCCChHHHHHHHHH
Q 022285 17 KILPVSAVLN-------AIRDLGDEAVEQC--DPQIITQASSLSQL-P-VES--FSIDTVLSISSSHELPGDQLLEEISR 83 (299)
Q Consensus 17 ~~vt~~dlse-------~m~~~A~~~~~~~--~~~i~~~~gd~~~L-p-~~~--~sfD~Vls~~~~~~~~~~~~L~ei~R 83 (299)
..|+..|+++ .+++.|+++++.. ..++.++.+|+..+ + +++ ++||+|++...+++......+.+..+
T Consensus 106 ~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~ 185 (258)
T 2r6z_A 106 LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMA 185 (258)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC-------------H
T ss_pred CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCCCcccchHHHHHHH
Confidence 3455555555 8888887665332 24599999998874 3 444 78999999865544322223333444
Q ss_pred hccC
Q 022285 84 VLKP 87 (299)
Q Consensus 84 vLKP 87 (299)
.|++
T Consensus 186 ~l~~ 189 (258)
T 2r6z_A 186 YFHR 189 (258)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 4444
No 286
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=66.47 E-value=1.7 Score=38.62 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=43.9
Q ss_pred ccceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCC----CceeEEEecCc
Q 022285 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES----FSIDTVLSISS 68 (299)
Q Consensus 6 ~~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~----~sfD~Vls~~~ 68 (299)
.|++||-|-.|+ .++..|+.+.|+..++++... ..++.++.+|+..+++++ ..|| |+++..
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHHhccCCCeE-EEecCC
Confidence 355666664433 344557889999999887654 578999999999998864 4688 666653
No 287
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=64.59 E-value=1.9 Score=38.73 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=40.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCC-ceeEEEecCccCC
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-SIDTVLSISSSHE 71 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~-sfD~Vls~~~~~~ 71 (299)
..|+..|+.+.|+..++++.. ..++.++.+|+..+++++. .||.|+++..++.
T Consensus 69 ~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 69 AEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp CCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred CEEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhhccCccEEEecCcccc
Confidence 345566778889998887654 3589999999999988753 6899999876543
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=64.23 E-value=1.7 Score=39.74 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=40.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCC--CCC---CceeEEEecCc
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VES---FSIDTVLSISS 68 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp--~~~---~sfD~Vls~~~ 68 (299)
..++..|.++.|++.|++++.....++.++++|+..++ ++. ..||.|++...
T Consensus 51 ~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 51 CRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp CEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcCc
Confidence 45667789999999999877554468999999998875 222 58999998653
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=61.18 E-value=12 Score=35.00 Aligned_cols=55 Identities=22% Similarity=0.140 Sum_probs=38.1
Q ss_pred CCeEEEeccCCCCC-CCCCceeEEEecCc-------c-------CCC-C----------hHHHHHHHHHhccCCcEEEEE
Q 022285 41 PQIITQASSLSQLP-VESFSIDTVLSISS-------S-------HEL-P----------GDQLLEEISRVLKPGGTILIY 94 (299)
Q Consensus 41 ~~i~~~~gd~~~Lp-~~~~sfD~Vls~~~-------~-------~~~-~----------~~~~L~ei~RvLKPGG~l~i~ 94 (299)
.++.+...|+..++ +..+.||.|+.-.. . .|. . ...+|....+.|||||+|+..
T Consensus 204 ~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 204 NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp SSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 57888888887764 45678999996421 0 010 0 135788889999999999766
Q ss_pred e
Q 022285 95 K 95 (299)
Q Consensus 95 ~ 95 (299)
+
T Consensus 284 T 284 (359)
T 4fzv_A 284 T 284 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=60.30 E-value=35 Score=32.18 Aligned_cols=80 Identities=13% Similarity=0.080 Sum_probs=51.7
Q ss_pred CCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCC---cEEEEEec-CCCCccchHHHHHHHHHHH
Q 022285 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPG---GTILIYKK-LTSDKGDVDKAISALEGKL 115 (299)
Q Consensus 40 ~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG---G~l~i~~~-~~~~~g~~~~~~~~l~~~L 115 (299)
.++|.++++|+..+..+...||+|+|-.+.. +..++.-+.+.|..| +.++.... .......+......+...+
T Consensus 251 ~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l 327 (375)
T 4auk_A 251 TGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQL 327 (375)
T ss_dssp TTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCccccccCCCCCcCEEEEcCCCC---hHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHH
Confidence 5789999999998887788999999976433 445555555655554 55443333 2222223334455677788
Q ss_pred HHCCcee
Q 022285 116 LLAGFLD 122 (299)
Q Consensus 116 ~laGFv~ 122 (299)
..+||..
T Consensus 328 ~~~g~~~ 334 (375)
T 4auk_A 328 DEHGINA 334 (375)
T ss_dssp HHTTCCE
T ss_pred HhcCcch
Confidence 8999863
No 291
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=58.30 E-value=13 Score=33.91 Aligned_cols=55 Identities=16% Similarity=0.112 Sum_probs=36.3
Q ss_pred eEEEeccCCCCCCCCCceeEEEecCccC----CCC---hHHHHHHHHHhccCC--cEEEEEecC
Q 022285 43 IITQASSLSQLPVESFSIDTVLSISSSH----ELP---GDQLLEEISRVLKPG--GTILIYKKL 97 (299)
Q Consensus 43 i~~~~gd~~~Lp~~~~sfD~Vls~~~~~----~~~---~~~~L~ei~RvLKPG--G~l~i~~~~ 97 (299)
+.+...++.-..++...||+|++-.+.. +.+ ...+|.-+.++|+|| |.|++..+.
T Consensus 140 ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 140 LIRFKDKTDVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GEEEECSCCGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred eEEeeCCcchhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 3333333333345678999999976544 222 123566778999999 999998876
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=53.93 E-value=39 Score=30.90 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=31.9
Q ss_pred CCCCCCceeEEEecCccC----CCC---hHHHHHHHHHhccCC-cEEEEEecC
Q 022285 53 LPVESFSIDTVLSISSSH----ELP---GDQLLEEISRVLKPG-GTILIYKKL 97 (299)
Q Consensus 53 Lp~~~~sfD~Vls~~~~~----~~~---~~~~L~ei~RvLKPG-G~l~i~~~~ 97 (299)
..+....||+|++-.+-. ..+ ...+|.-+.++|+|| |.|++..+.
T Consensus 141 ~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 141 FTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp TTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 345578899999975433 111 134566678999999 999998775
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=48.84 E-value=75 Score=28.59 Aligned_cols=52 Identities=21% Similarity=0.137 Sum_probs=34.3
Q ss_pred EEEec-cCCCCCCCCCceeEEEecCccC---C-CC---hHHHHHHHHHhccCCc-EEEEEecC
Q 022285 44 ITQAS-SLSQLPVESFSIDTVLSISSSH---E-LP---GDQLLEEISRVLKPGG-TILIYKKL 97 (299)
Q Consensus 44 ~~~~g-d~~~Lp~~~~sfD~Vls~~~~~---~-~~---~~~~L~ei~RvLKPGG-~l~i~~~~ 97 (299)
.++++ |+..++ ...||+|+|-.+-. + ++ .-.+|.-+.++|+||| .|++..+.
T Consensus 125 ~~~~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 125 TMKSGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEECSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeeccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 44446 887643 56899999965322 1 11 1125655669999999 99988776
No 294
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=45.37 E-value=37 Score=31.20 Aligned_cols=62 Identities=18% Similarity=0.118 Sum_probs=39.5
Q ss_pred CceeEEEecCc----cCC-C---C----hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceecee
Q 022285 58 FSIDTVLSISS----SHE-L---P----GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (299)
Q Consensus 58 ~sfD~Vls~~~----~~~-~---~----~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (299)
..||+|++... .|+ - + ...++.-..++|+|||.|++.-+..++ ...+.+ ......-|..+..
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD-----r~se~l-v~~LaR~F~~Vr~ 278 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD-----RASESI-IGAIARQFKFSRV 278 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS-----HHHHHH-HHHHHTTEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc-----ccHHHH-HHHHHHhcceeee
Confidence 56999999753 344 1 1 134677788999999999999886531 111233 3445556776653
No 295
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=45.36 E-value=14 Score=36.94 Aligned_cols=56 Identities=21% Similarity=0.375 Sum_probs=39.0
Q ss_pred CCceeEEEecC-ccCCCC---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 57 SFSIDTVLSIS-SSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 57 ~~sfD~Vls~~-~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
...||+|+.-- +-..-| ...++.+++|+++|||++.-.... ..+++.|..+||...
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr~~L~~aGf~v~ 236 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFVRRGLQDAGFTMQ 236 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC-----------HHHHHHHHHHTCEEE
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHHHHHHhCCeEEE
Confidence 46799999742 211111 468999999999999998743221 167788999999643
No 296
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=43.38 E-value=4 Score=39.07 Aligned_cols=61 Identities=8% Similarity=0.053 Sum_probs=44.6
Q ss_pred cceEEEEecCC------------ccChHHHHHHHHHHHHHHhhhc---CCCeEEEeccCCCC-CC-CCCceeEEEecC
Q 022285 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC---DPQIITQASSLSQL-PV-ESFSIDTVLSIS 67 (299)
Q Consensus 7 ~~~vLlL~~~~------------~vt~~dlse~m~~~A~~~~~~~---~~~i~~~~gd~~~L-p~-~~~sfD~Vls~~ 67 (299)
|.+||-|.-|+ .|+..|.++.|++.|+++++.. ..++.++++|+... +. ++.+||+|++.-
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 55677665433 4567788999999999887643 25899999999874 32 346899999964
No 297
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=43.31 E-value=28 Score=32.26 Aligned_cols=73 Identities=21% Similarity=0.050 Sum_probs=45.8
Q ss_pred EEEeccCCCCCCCCCceeEEEecCc---c-C-------CCC-hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHH
Q 022285 44 ITQASSLSQLPVESFSIDTVLSISS---S-H-------ELP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 111 (299)
Q Consensus 44 ~~~~gd~~~Lp~~~~sfD~Vls~~~---~-~-------~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l 111 (299)
.++++|...+.. ...||+|+|-.+ . + ... -+.++.-+.+.|+|||.|++.....+. . +.
T Consensus 155 ~~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg----~----~~ 225 (344)
T 3r24_A 155 STLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW----N----AD 225 (344)
T ss_dssp EEEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC----C----HH
T ss_pred eEEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC----H----HH
Confidence 448888765433 478999999642 1 1 111 255666678899999999999876432 1 12
Q ss_pred HHHHHHCCceeceee
Q 022285 112 EGKLLLAGFLDAQRI 126 (299)
Q Consensus 112 ~~~L~laGFv~v~~~ 126 (299)
...++ .-|..+...
T Consensus 226 L~~lr-k~F~~VK~f 239 (344)
T 3r24_A 226 LYKLM-GHFSWWTAF 239 (344)
T ss_dssp HHHHH-TTEEEEEEE
T ss_pred HHHHH-hhCCeEEEE
Confidence 22333 378876654
No 298
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=42.77 E-value=11 Score=34.48 Aligned_cols=45 Identities=29% Similarity=0.262 Sum_probs=31.8
Q ss_pred CCCCCceeEEEecCc----cCCCC--------hHHHHHHHHHhccCCcEEEEEecCC
Q 022285 54 PVESFSIDTVLSISS----SHELP--------GDQLLEEISRVLKPGGTILIYKKLT 98 (299)
Q Consensus 54 p~~~~sfD~Vls~~~----~~~~~--------~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (299)
|-.-+.||+|+.+.. .||+. ...+-....+.|+|||.+++.-.+-
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 433378999998753 34432 2456667889999999999887653
No 299
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=42.35 E-value=16 Score=36.70 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=31.5
Q ss_pred CCCCCCceeEEEecCc----cCCCC--------hHHHHHHHHHhccCCcEEEEEecC
Q 022285 53 LPVESFSIDTVLSISS----SHELP--------GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 53 Lp~~~~sfD~Vls~~~----~~~~~--------~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
+| +...||+|+.+.. .||+. ...+-....+.|||||.+++.-.+
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG 271 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG 271 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee
Confidence 45 3568999998752 34432 245667788999999999988654
No 300
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=42.07 E-value=62 Score=28.69 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=41.3
Q ss_pred eEEEEecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCC---CCceeEEEecCccC-CCChHHHHHHHHHh
Q 022285 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE---SFSIDTVLSISSSH-ELPGDQLLEEISRV 84 (299)
Q Consensus 9 ~vLlL~~~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~---~~sfD~Vls~~~~~-~~~~~~~L~ei~Rv 84 (299)
+||+|-....-...+...++++. ..-.+.++. ...+|.. -+.||+|+...... ++. ...++.+.+.
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~-------~g~~V~~i~--~~~~~~~~~~L~~yDvIIl~d~~~~~l~-~~~~~~L~~y 75 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTS-------WQWEFDYIP--SHVGLDVGELLAKQDLVILSDYPAERMT-AQAIDQLVTM 75 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHH-------TTCCCEEEC--TTSCBCSSHHHHTCSEEEEESCCGGGBC-HHHHHHHHHH
T ss_pred eEEEECCCCchhHHHHHHHHHHh-------CCceEEEec--ccccccChhHHhcCCEEEEcCCccccCC-HHHHHHHHHH
Confidence 89999433222333433333331 122344443 2233321 24899998764322 344 3556667777
Q ss_pred ccCCcEEEEEe
Q 022285 85 LKPGGTILIYK 95 (299)
Q Consensus 85 LKPGG~l~i~~ 95 (299)
.+.||-|++.-
T Consensus 76 V~~GGgLi~~g 86 (259)
T 3rht_A 76 VKAGCGLVMLG 86 (259)
T ss_dssp HHTTCEEEEEC
T ss_pred HHhCCeEEEec
Confidence 77899988764
No 301
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=40.01 E-value=1.1e+02 Score=27.37 Aligned_cols=45 Identities=11% Similarity=0.152 Sum_probs=25.9
Q ss_pred HHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcee
Q 022285 75 DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (299)
Q Consensus 75 ~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (299)
..+..+..+++..+..+++.-.--. ........+.......||.-
T Consensus 101 ~dv~~~~~~l~~aD~iv~~~P~~w~---~~Pa~lK~~iDrv~~~g~ay 145 (280)
T 4gi5_A 101 ADIVAEQEKLLWADTVIFQFPLWWF---SMPAIMKGWIDRVYAWGFAY 145 (280)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECBTT---BCCHHHHHHHHHHSCBTTTB
T ss_pred HHHHHHHHHHHhCCEEEEEeccccc---cCcHHHHHHHHHhcccCcee
Confidence 3456667777777777766543221 11223346666777788764
No 302
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=37.78 E-value=28 Score=34.85 Aligned_cols=71 Identities=21% Similarity=0.368 Sum_probs=46.0
Q ss_pred CeEEEeccCCC-CC-CC---CCceeEEEecC-ccCCCC---hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHH
Q 022285 42 QIITQASSLSQ-LP-VE---SFSIDTVLSIS-SSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALE 112 (299)
Q Consensus 42 ~i~~~~gd~~~-Lp-~~---~~sfD~Vls~~-~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~ 112 (299)
.+....||+.. |+ +. +..||+|+.-- +-..-+ ...++..++|+++|||++.-.... ..++
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr 217 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-----------GFVR 217 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC-----------HHHH
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHH
Confidence 45556777653 22 11 46899999742 211111 468999999999999998733221 2677
Q ss_pred HHHHHCCceec
Q 022285 113 GKLLLAGFLDA 123 (299)
Q Consensus 113 ~~L~laGFv~v 123 (299)
+.|..+||...
T Consensus 218 ~~l~~aGf~~~ 228 (689)
T 3pvc_A 218 RGLQQAGFNVT 228 (689)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHhCCeEEE
Confidence 88999999744
No 303
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=35.99 E-value=85 Score=23.95 Aligned_cols=74 Identities=14% Similarity=0.097 Sum_probs=43.5
Q ss_pred eEEEEecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCceeEEEecCccCCCChHHHHHHHHHhccCC
Q 022285 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPG 88 (299)
Q Consensus 9 ~vLlL~~~~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG 88 (299)
++||+....-.|.. ++..|.+.|+++ +-.+.........+.-.-..||+|+..--.. -.+.++.....+-
T Consensus 8 kIlL~C~aGmSTsl-lv~km~~~a~~~----gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~-----y~~~~ik~~~~~~ 77 (108)
T 3nbm_A 8 KVLVLCAGSGTSAQ-LANAINEGANLT----EVRVIANSGAYGAHYDIMGVYDLIILAPQVR-----SYYREMKVDAERL 77 (108)
T ss_dssp EEEEEESSSSHHHH-HHHHHHHHHHHH----TCSEEEEEEETTSCTTTGGGCSEEEECGGGG-----GGHHHHHHHHTTT
T ss_pred eEEEECCCCCCHHH-HHHHHHHHHHHC----CCceEEEEcchHHHHhhccCCCEEEEChHHH-----HHHHHHHHHhhhc
Confidence 68888776655544 889999888653 2344444333333322234699999864222 2355666666666
Q ss_pred cEEE
Q 022285 89 GTIL 92 (299)
Q Consensus 89 G~l~ 92 (299)
|.=+
T Consensus 78 ~ipV 81 (108)
T 3nbm_A 78 GIQI 81 (108)
T ss_dssp TCEE
T ss_pred CCcE
Confidence 6543
No 304
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=33.56 E-value=28 Score=30.95 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=42.3
Q ss_pred CCCeEEEeccCCC-CC-----CCCCceeEEEecCccCCCChHHHHHHHHHhccCCcEEEEEecC
Q 022285 40 DPQIITQASSLSQ-LP-----VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 40 ~~~i~~~~gd~~~-Lp-----~~~~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
..++.++.|++.. || .+...||+|+.-.- .+-+....+..++..|+|||.+++-+..
T Consensus 157 ~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 157 TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 4789999998764 33 24567999998763 2223456789999999999999987763
No 305
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=33.53 E-value=52 Score=34.50 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=36.0
Q ss_pred EEEeccCCCC-CCCCCceeEEEecCccCC--CC----------------------------hHHHHHHHHHhccCCcEEE
Q 022285 44 ITQASSLSQL-PVESFSIDTVLSISSSHE--LP----------------------------GDQLLEEISRVLKPGGTIL 92 (299)
Q Consensus 44 ~~~~gd~~~L-p~~~~sfD~Vls~~~~~~--~~----------------------------~~~~L~ei~RvLKPGG~l~ 92 (299)
.+...++... +.....||+|+++-.+.. .. ...++..+.+.|+|||++.
T Consensus 383 ~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 383 TITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp EEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred eEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 4445555543 234578999999865421 10 1236788999999999998
Q ss_pred EEecC
Q 022285 93 IYKKL 97 (299)
Q Consensus 93 i~~~~ 97 (299)
+..+.
T Consensus 463 fIlP~ 467 (878)
T 3s1s_A 463 AIMPK 467 (878)
T ss_dssp EEEET
T ss_pred EEECh
Confidence 87764
No 306
>3cdw_H Protein 3B, VPG; RNA-dependent RNA polymerase, protein primer vizier viral enzymes involved in replication, transferase-V protein complex; 2.50A {Coxsackievirus B3} PDB: 2bbl_A 2bbp_A
Probab=33.52 E-value=21 Score=20.76 Aligned_cols=20 Identities=10% Similarity=0.054 Sum_probs=13.5
Q ss_pred CCCCCCCCCCCCCCCCCcEE
Q 022285 250 RYMPLQGSASIQTGREGVTV 269 (299)
Q Consensus 250 PYlGlPaFkp~~~~~~~~~~ 269 (299)
||-|||--||-.|---..+|
T Consensus 2 ~YsG~p~~~~k~P~lR~a~v 21 (26)
T 3cdw_H 2 AYTGVPNQKPRVPTLRQAKV 21 (26)
T ss_pred CccCCCcccCCCCeeEEEEE
Confidence 89999987776664333443
No 307
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=30.52 E-value=16 Score=22.29 Aligned_cols=16 Identities=13% Similarity=0.434 Sum_probs=13.5
Q ss_pred CCCCCcchh-----hhccCCC
Q 022285 234 QSACGSVMW-----TWRCFPL 249 (299)
Q Consensus 234 ~ssCGsC~L-----AFRC~~C 249 (299)
.=.|..|++ |++|.-|
T Consensus 7 ~W~C~~C~~~N~~~~~kC~aC 27 (33)
T 3gj3_B 7 TWDCDTCLVQNKPEAVKCVAC 27 (33)
T ss_dssp CEECTTTCCEECTTCSBCTTT
T ss_pred ceeCCcccCCCccccCEEccc
Confidence 346999999 9999988
No 308
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=30.48 E-value=1.7e+02 Score=23.53 Aligned_cols=65 Identities=12% Similarity=-0.035 Sum_probs=32.0
Q ss_pred ceeEEEecCccCCCChHHHHHHHHHhc-------cCCcE-EE-EEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 59 SIDTVLSISSSHELPGDQLLEEISRVL-------KPGGT-IL-IYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 59 sfD~Vls~~~~~~~~~~~~L~ei~RvL-------KPGG~-l~-i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
.+|.|+..+...|......+..+...+ .-.|+ +. +..... ..+....+...+...+...||..+.
T Consensus 70 ~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~-~~~g~~~~~~~l~~~l~~~g~~~~~ 143 (199)
T 2zki_A 70 WADGFAIGSPTRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEAST-VHGGHETTILTMSTYAYHFGMIIVP 143 (199)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBSS-TTSSSSHHHHHHTHHHHHHTCEECC
T ss_pred hCCEEEEECCccccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCCC-CCCCHHHHHHHHHHHHHHCCeEEeC
Confidence 578888887666544222233333322 12232 22 222221 1111223445677788888988764
No 309
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=27.95 E-value=9.4 Score=33.64 Aligned_cols=50 Identities=8% Similarity=-0.038 Sum_probs=37.2
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCC-----ceeEEEecCcc
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-----SIDTVLSISSS 69 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~-----sfD~Vls~~~~ 69 (299)
++..|+.+.|+..++++... ..++.++.+|+..+++++. ..+.|+++..+
T Consensus 46 v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 46 LTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp EEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred EEEEECCHHHHHHHHHHhcc-CCceEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 66778888999988876543 3589999999999887542 34678887653
No 310
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=27.78 E-value=16 Score=32.69 Aligned_cols=46 Identities=7% Similarity=-0.032 Sum_probs=33.6
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCC------ceeEEEecC
Q 022285 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF------SIDTVLSIS 67 (299)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~------sfD~Vls~~ 67 (299)
++..|+.+.|+..++++. ..++.++.+|+.++++++- ....|+++.
T Consensus 71 V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQRF---GELLELHAGDALTFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp EEEEECCHHHHHHHHHHH---GGGEEEEESCGGGCCGGGGSCSSSSCCEEEEEEC
T ss_pred EEEEECCHHHHHHHHHhc---CCCcEEEECChhcCChhHhcccccCCceEEEEcc
Confidence 556677788999988763 5689999999999988653 123566654
No 311
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=27.57 E-value=2e+02 Score=21.84 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=34.8
Q ss_pred ceeEEEecCccCCC---ChHHHHHHHHHhcc----CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceece
Q 022285 59 SIDTVLSISSSHEL---PGDQLLEEISRVLK----PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (299)
Q Consensus 59 sfD~Vls~~~~~~~---~~~~~L~ei~RvLK----PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (299)
.+|.|+.....++. ..+..+..+.+.|+ .|=.+.+.-.+.+..+.+..+...+...|...|+..+.
T Consensus 49 ~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~ 121 (148)
T 3f6r_A 49 GYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIA 121 (148)
T ss_dssp TCSEEEEEECEECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECS
T ss_pred cCCEEEEEecccCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEee
Confidence 78988877655443 22223444554443 23333333332222222233455788889999998663
No 312
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=27.00 E-value=1.2e+02 Score=22.69 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=32.4
Q ss_pred EEecCccCCCC--hHHHHHHHHHhccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCceec
Q 022285 63 VLSISSSHELP--GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (299)
Q Consensus 63 Vls~~~~~~~~--~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (299)
|+-.....+++ .-.+|.++++-++.|+.+++..... .+.+.|..+||...
T Consensus 50 ilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~-----------~v~~~l~~~gl~~~ 101 (118)
T 3ny7_A 50 ILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEF-----------QPLRTMARAGIQPI 101 (118)
T ss_dssp EEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCH-----------HHHHHHHHTTCCCB
T ss_pred EEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCH-----------HHHHHHHHcCChhh
Confidence 33333344455 3456777777776688888876532 56778999999753
No 313
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=26.98 E-value=55 Score=28.40 Aligned_cols=62 Identities=15% Similarity=0.064 Sum_probs=41.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCCCCc-eeEEEecCccCCCChHHHHHHHHH
Q 022285 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFS-IDTVLSISSSHELPGDQLLEEISR 83 (299)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~i~~~~gd~~~Lp~~~~s-fD~Vls~~~~~~~~~~~~L~ei~R 83 (299)
..++..|+.+.|...++++ ...++.++.+|+..+++++.. ...|+++..++. ...++.++.+
T Consensus 55 ~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i--~~~il~~ll~ 117 (249)
T 3ftd_A 55 KKLYVIELDREMVENLKSI---GDERLEVINEDASKFPFCSLGKELKVVGNLPYNV--ASLIIENTVY 117 (249)
T ss_dssp SEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTT--HHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCChhHccCCcEEEEECchhc--cHHHHHHHHh
Confidence 4566778889999998765 246899999999999887632 225666654332 2334444444
No 314
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=24.76 E-value=23 Score=24.06 Aligned_cols=10 Identities=20% Similarity=0.461 Sum_probs=8.0
Q ss_pred hhccCCCCCC
Q 022285 243 TWRCFPLRYM 252 (299)
Q Consensus 243 AFRC~~CPYl 252 (299)
.|.|..|+|-
T Consensus 36 r~~C~kCgyt 45 (55)
T 2k4x_A 36 RYSCGRCGYT 45 (55)
T ss_dssp EEECTTTCCC
T ss_pred EEECCCCCCE
Confidence 6788888886
No 315
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=24.48 E-value=34 Score=31.07 Aligned_cols=24 Identities=29% Similarity=0.540 Sum_probs=20.6
Q ss_pred hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.+.+|..+.++|+|||++.|....
T Consensus 212 L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCEEEEEecC
Confidence 467899999999999999887763
No 316
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=23.40 E-value=36 Score=31.80 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=20.5
Q ss_pred hHHHHHHHHHhccCCcEEEEEecC
Q 022285 74 GDQLLEEISRVLKPGGTILIYKKL 97 (299)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (299)
.+.+|..+.++|+|||+|.|..+.
T Consensus 253 L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 253 IEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHhCCCCEEEEEecC
Confidence 467899999999999999888763
No 317
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=23.31 E-value=3.9e+02 Score=23.87 Aligned_cols=76 Identities=7% Similarity=-0.042 Sum_probs=48.8
Q ss_pred CCCeEEEeccCCC-CC---CCCCceeEEEecCccCCCC-hHHHHHHHHH--hccCCcEEEEEecCCCCccchHHHHHHHH
Q 022285 40 DPQIITQASSLSQ-LP---VESFSIDTVLSISSSHELP-GDQLLEEISR--VLKPGGTILIYKKLTSDKGDVDKAISALE 112 (299)
Q Consensus 40 ~~~i~~~~gd~~~-Lp---~~~~sfD~Vls~~~~~~~~-~~~~L~ei~R--vLKPGG~l~i~~~~~~~~g~~~~~~~~l~ 112 (299)
..++.+...|+.. +. -+...||+|+.--.+..-. -..++..+.+ .+.|+|.++|+-+... ......+.
T Consensus 136 ~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~-----~~~~~~~~ 210 (283)
T 2oo3_A 136 NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN-----KAWTEQFL 210 (283)
T ss_dssp TSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS-----HHHHHHHH
T ss_pred CCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc-----hHHHHHHH
Confidence 4578888888533 21 1345799999987655322 3455555554 5679999999987642 12234677
Q ss_pred HHHHHCCc
Q 022285 113 GKLLLAGF 120 (299)
Q Consensus 113 ~~L~laGF 120 (299)
+.|...|.
T Consensus 211 ~~l~~~~~ 218 (283)
T 2oo3_A 211 RKMREISS 218 (283)
T ss_dssp HHHHHHCS
T ss_pred HHHHhcCC
Confidence 77877777
No 318
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=22.79 E-value=1.8e+02 Score=28.18 Aligned_cols=96 Identities=16% Similarity=0.064 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhh-hcCCCeEEEeccCCCCCCC----CCceeEEEecCccC--C-----------CC----hHHHHHH
Q 022285 23 AVLNAIRDLGDEAVE-QCDPQIITQASSLSQLPVE----SFSIDTVLSISSSH--E-----------LP----GDQLLEE 80 (299)
Q Consensus 23 dlse~m~~~A~~~~~-~~~~~i~~~~gd~~~Lp~~----~~sfD~Vls~~~~~--~-----------~~----~~~~L~e 80 (299)
|+...+..+|+.++- +......+..+|....|+. ...||+|+++-.+. + .+ .-.+++.
T Consensus 261 E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~ 340 (530)
T 3ufb_A 261 EAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQL 340 (530)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHH
Confidence 444555556654332 2222334456665554432 34799999996532 1 11 1346788
Q ss_pred HHHhcc-------CCcEEEEEecCCCCccchH--HHHHHHHHHHHHCCcee
Q 022285 81 ISRVLK-------PGGTILIYKKLTSDKGDVD--KAISALEGKLLLAGFLD 122 (299)
Q Consensus 81 i~RvLK-------PGG~l~i~~~~~~~~g~~~--~~~~~l~~~L~laGFv~ 122 (299)
+.+.|| |||++.+..+.. -+. .....+++.|...+.+.
T Consensus 341 ~l~~Lk~~~~~l~~gGr~avVlP~g----~Lf~~~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 341 IMRKLKRPGHGSDNGGRAAVVVPNG----TLFSDGISARIKEELLKNFNLH 387 (530)
T ss_dssp HHHHBCCTTSSSSSCCEEEEEEEHH----HHHCCTHHHHHHHHHHHHSEEE
T ss_pred HHHHhhhhhhccCCCceEEEEecch----hhhccchHHHHHHHHhhcCEEE
Confidence 888887 799998776531 110 11235777777776654
No 319
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=20.67 E-value=31 Score=19.24 Aligned_cols=9 Identities=0% Similarity=-0.455 Sum_probs=6.2
Q ss_pred CCCCCCCCC
Q 022285 254 LQGSASIQT 262 (299)
Q Consensus 254 lPaFkp~~~ 262 (299)
-|+|+||.|
T Consensus 7 pPef~pg~p 15 (22)
T 3ktp_B 7 PPEFHPGVP 15 (26)
T ss_pred CcccccCCc
Confidence 388887754
No 320
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=20.45 E-value=27 Score=21.70 Aligned_cols=18 Identities=28% Similarity=0.981 Sum_probs=13.8
Q ss_pred CCCCCCC-CccCCCCCccc
Q 022285 195 GDCEVGS-TRKACKNCICG 212 (299)
Q Consensus 195 ~~C~~~~-krkACknCtCG 212 (299)
..|.+|. ++.-|-.|+|.
T Consensus 2 ~~C~PG~~~k~~CN~C~C~ 20 (35)
T 1gl0_I 2 EKCTPGQVKQQDCNTCTCT 20 (35)
T ss_dssp -CCCTTCEEECSSCEEEEC
T ss_pred CccCCCcccccCCCccCCC
Confidence 4688875 57889999996
No 321
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.39 E-value=33 Score=22.61 Aligned_cols=17 Identities=12% Similarity=0.331 Sum_probs=15.1
Q ss_pred CCCCCCcchh-----hhccCCC
Q 022285 233 PQSACGSVMW-----TWRCFPL 249 (299)
Q Consensus 233 ~~ssCGsC~L-----AFRC~~C 249 (299)
..=.|..||. +++|..|
T Consensus 10 gsW~C~~C~v~N~a~~~kC~aC 31 (47)
T 2ebr_A 10 GSWDCELCLVQNKADSTKCLAC 31 (47)
T ss_dssp SSCCCSSSCCCCCSSCSBCSSS
T ss_pred CeeECCeeecCCcCCcceecCc
Confidence 4567999999 9999999
No 322
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.03 E-value=32 Score=22.71 Aligned_cols=18 Identities=11% Similarity=0.379 Sum_probs=14.9
Q ss_pred CCCCCCcchh-----hhccCCCC
Q 022285 233 PQSACGSVMW-----TWRCFPLR 250 (299)
Q Consensus 233 ~~ssCGsC~L-----AFRC~~CP 250 (299)
..=.|..||. +++|..|=
T Consensus 10 g~W~C~~C~v~N~a~~~kC~aCe 32 (47)
T 2ebq_A 10 GTWDCDTCLVQNKPEAIKCVACE 32 (47)
T ss_dssp SSEECSSSCCEECSSCSBCSSSC
T ss_pred CceECCeeeccCccCCceecCcC
Confidence 3567999999 99999984
Done!