Query 022286
Match_columns 299
No_of_seqs 200 out of 987
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 03:02:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022286.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022286hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bbha1 d.328.1.1 (A:13-244) M 26.4 87 0.0063 24.3 7.3 65 91-160 162-226 (232)
2 d1wlza1 a.39.1.7 (A:229-311) D 17.1 96 0.007 19.9 4.8 51 141-191 9-61 (83)
3 d1ghca_ a.4.5.13 (A:) Histone 16.3 15 0.0011 24.9 0.1 21 255-276 11-31 (75)
4 d1fx0b1 a.69.1.1 (B:378-485) F 15.1 57 0.0042 23.6 3.2 31 171-201 47-87 (108)
5 d1hsta_ a.4.5.13 (A:) Histone 13.0 9.7 0.00071 25.7 -1.7 17 255-272 10-26 (74)
6 d1sfka_ a.190.1.1 (A:) Flavivi 12.3 26 0.0019 23.7 0.5 29 139-167 38-66 (73)
7 d1ussa_ a.4.5.13 (A:) Histone 11.3 19 0.0014 25.0 -0.5 18 255-273 15-32 (88)
8 d1skye1 a.69.1.1 (E:357-470) F 10.9 1E+02 0.0075 22.3 3.5 33 171-203 47-89 (114)
9 d1khba1 c.91.1.1 (A:260-622) C 9.5 1.9E+02 0.014 24.9 5.4 34 85-118 324-362 (363)
10 d2jdid1 a.69.1.1 (D:358-475) F 8.9 1.2E+02 0.0089 22.0 3.3 32 171-202 50-91 (118)
No 1
>d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.38 E-value=87 Score=24.27 Aligned_cols=65 Identities=12% Similarity=0.035 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Q 022286 91 IDKFNAFFLEKEEEYVIKWKELQDRVAKSKDSNEELMKVGREIVDFHGEMVLLENYSALNYTGLVKILKK 160 (299)
Q Consensus 91 l~KVn~Fy~eke~el~~rl~~L~~~i~~~~~s~e~~~~l~~~l~el~~el~~L~~f~~LN~tgf~KILKK 160 (299)
++.+..-|..-..++..++..|++.+-.- . -......+..+-+++..|+++..=+...+.++++-
T Consensus 162 ld~ivd~y~~~l~~l~~~id~lE~~v~~~---~--~~~~l~~i~~lrr~l~~lrr~l~p~revl~~L~r~ 226 (232)
T d2bbha1 162 IDALVDDYFVLLEKIDDEIDVLEEEVLER---P--EKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRD 226 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhC---C--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34555556666677777777777654321 1 11233467788888888998888888999988864
No 2
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.08 E-value=96 Score=19.89 Aligned_cols=51 Identities=14% Similarity=0.259 Sum_probs=31.7
Q ss_pred HHHHhHHHHHHHHHHHHHHhHhhhc-CCcccHHHHHHhhc-CCCCChHHHHHH
Q 022286 141 VLLENYSALNYTGLVKILKKYDKRT-GALIRLPFIKKVLQ-QPFYTTDVLNKL 191 (299)
Q Consensus 141 ~~L~~f~~LN~tgf~KILKK~DK~t-g~~l~~~f~~~V~~-qpF~~~~~L~~L 191 (299)
..|++...-++..+.++.+.||+.- |.-....|..-+.. .+-.+.+.+..|
T Consensus 9 ~~l~~~i~~~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l 61 (83)
T d1wlza1 9 ARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRL 61 (83)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHH
Confidence 3466666778888999999999886 44445555553322 333455555433
No 3
>d1ghca_ a.4.5.13 (A:) Histone H1, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=16.30 E-value=15 Score=24.91 Aligned_cols=21 Identities=29% Similarity=0.278 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhcCCCccccCCC
Q 022286 255 LSALRVLKEIRSGSSTVSMFSL 276 (299)
Q Consensus 255 ~~al~~~~~~~~~sst~~~~s~ 276 (299)
+.|+.+|+| |+|||-..+..-
T Consensus 11 ~eAI~al~e-r~GsS~~AI~ky 31 (75)
T d1ghca_ 11 TKAVSASKE-RKGLSLAALKKA 31 (75)
T ss_dssp HHHHHHCSS-SSCCTTSSGGGS
T ss_pred HHHHHHcCC-CCCcCHHHHHHH
Confidence 477888888 999998876543
No 4
>d1fx0b1 a.69.1.1 (B:378-485) F1 ATP synthase beta subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=15.05 E-value=57 Score=23.57 Aligned_cols=31 Identities=26% Similarity=0.520 Sum_probs=20.7
Q ss_pred HHHHHHhhcCCCCChHH----------HHHHHHHHHHHHHH
Q 022286 171 LPFIKKVLQQPFYTTDV----------LNKLVKECEVRLDQ 201 (299)
Q Consensus 171 ~~f~~~V~~qpF~~~~~----------L~~Lv~~~E~l~~~ 201 (299)
..-+++-++||||..+. |.+-+..|+.++..
T Consensus 47 Arklq~FLtQpFfvae~fTg~~G~~V~l~dTi~g~~~IL~G 87 (108)
T d1fx0b1 47 ARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSG 87 (108)
T ss_dssp HHHHHHHTCCCCSSCTTTSCSCCCCCCHHHHHHHHHTTTTT
T ss_pred HHHHHHHhccccccceecCCCCcCEecHHHHHhhHHHHhCC
Confidence 34456678999987533 66677777776543
No 5
>d1hsta_ a.4.5.13 (A:) Histone H5, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=13.02 E-value=9.7 Score=25.74 Aligned_cols=17 Identities=47% Similarity=0.532 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhcCCCccc
Q 022286 255 LSALRVLKEIRSGSSTVS 272 (299)
Q Consensus 255 ~~al~~~~~~~~~sst~~ 272 (299)
++|+.+|+| |+|||-..
T Consensus 10 ~eAI~al~e-r~GsS~~A 26 (74)
T d1hsta_ 10 AAAIRAEKS-RGGSSRQS 26 (74)
T ss_dssp HHHHHTCCC-SSCEEHHH
T ss_pred HHHHHHcCC-CCCcCHHH
Confidence 578888888 99998654
No 6
>d1sfka_ a.190.1.1 (A:) Flavivirus capsid protein C {Kunjin virus [TaxId: 11077]}
Probab=12.33 E-value=26 Score=23.70 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=24.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHhHhhhcCC
Q 022286 139 EMVLLENYSALNYTGLVKILKKYDKRTGA 167 (299)
Q Consensus 139 el~~L~~f~~LN~tgf~KILKK~DK~tg~ 167 (299)
.-.+|+.+..+|...-.|||+.|.|-.|.
T Consensus 38 t~~ll~RW~~v~K~~A~k~L~~FKKeig~ 66 (73)
T d1sfka_ 38 TRAVLDRWRSVNKQTAMKHLLSFKKELGT 66 (73)
T ss_dssp CHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999997764
No 7
>d1ussa_ a.4.5.13 (A:) Histone H1 homologue Hho1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.35 E-value=19 Score=25.01 Aligned_cols=18 Identities=28% Similarity=0.518 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhcCCCcccc
Q 022286 255 LSALRVLKEIRSGSSTVSM 273 (299)
Q Consensus 255 ~~al~~~~~~~~~sst~~~ 273 (299)
+.|+.+|+| |+|||-..+
T Consensus 15 ~eAI~~L~e-r~GsS~~aI 32 (88)
T d1ussa_ 15 LKSMPQLND-GKGSSRIVL 32 (88)
T ss_dssp HHHHHHSCC-TTSBCHHHH
T ss_pred HHHHHHcCC-CCCcCHHHH
Confidence 588888888 999987653
No 8
>d1skye1 a.69.1.1 (E:357-470) F1 ATP synthase beta subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=10.87 E-value=1e+02 Score=22.33 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCChHH----------HHHHHHHHHHHHHHHh
Q 022286 171 LPFIKKVLQQPFYTTDV----------LNKLVKECEVRLDQLF 203 (299)
Q Consensus 171 ~~f~~~V~~qpF~~~~~----------L~~Lv~~~E~l~~~lf 203 (299)
..-+++-++||||..+. |.+-++.|+.+++.-+
T Consensus 47 ARklqrFLsQpF~vaE~fTG~~G~~V~l~dTi~g~~~Il~G~~ 89 (114)
T d1skye1 47 ARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKY 89 (114)
T ss_dssp HHHHHHHTCBCCTTTHHHHSCCCCCCCHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhcCCceeceeecCCCeeEeeHHHHHHHHHHHhCCCC
Confidence 34456677999997654 7788888988876443
No 9
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.47 E-value=1.9e+02 Score=24.89 Aligned_cols=34 Identities=12% Similarity=0.412 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhh
Q 022286 85 KLLEDEIDKFNAFFLEKEE-----EYVIKWKELQDRVAK 118 (299)
Q Consensus 85 ~~L~~El~KVn~Fy~eke~-----el~~rl~~L~~~i~~ 118 (299)
.....|++.+..||.++.. ++...+..|++++++
T Consensus 324 ~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~~ 362 (363)
T d1khba1 324 EFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRISQ 362 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhc
Confidence 4567889999999977753 677777777777654
No 10
>d2jdid1 a.69.1.1 (D:358-475) F1 ATP synthase beta subunit, domain 3 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.95 E-value=1.2e+02 Score=22.03 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=22.8
Q ss_pred HHHHHHhhcCCCCChHH----------HHHHHHHHHHHHHHH
Q 022286 171 LPFIKKVLQQPFYTTDV----------LNKLVKECEVRLDQL 202 (299)
Q Consensus 171 ~~f~~~V~~qpF~~~~~----------L~~Lv~~~E~l~~~l 202 (299)
..-+++-++||||..+. |.+-++.|+.+++.-
T Consensus 50 ARklqrfLsQpFfvae~fTg~~G~~V~l~dTi~g~~~Il~G~ 91 (118)
T d2jdid1 50 ARKIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGE 91 (118)
T ss_dssp HHHHHHHHCCCCGGGHHHHSSCCCCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCcceeeeeecCCCcceecHHHHHHHHHHHhCCC
Confidence 34456677999987654 777788888887543
Done!