Your job contains 1 sequence.
>022288
MFCSQKNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADT
VQLLKDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAM
VPWAAMDHSVMMAPPSYPYPVPMPMPPGAIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPY
MAPNTLVEQQSAQYASAVAQPSGRSQGSAKEDSGNKSSGESKIEKNEDSNDVTTDLELKT
PGSTTDQDLPSGQRKSKKSLRKENSFTNGSSSSRCSSSRSVQDSSSNSVAGGRKADDLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022288
(299 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092216 - symbol:bHLH121 "AT3G19860" species:3... 477 1.8e-68 2
UNIPROTKB|Q67U21 - symbol:OSJNBa0065F08.2 "Basic helix-lo... 447 1.1e-56 2
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 368 6.5e-39 2
UNIPROTKB|Q69V10 - symbol:P0506F02.119 "cDNA clone:J02306... 242 1.7e-20 1
UNIPROTKB|Q2R1K8 - symbol:Os11g0601700 "Helix-loop-helix ... 229 4.0e-19 1
TAIR|locus:2157538 - symbol:ILR3 "AT5G54680" species:3702... 222 2.2e-18 1
UNIPROTKB|Q6ZGM4 - symbol:OJ1442_E05.19 "cDNA clone:006-3... 218 5.8e-18 1
UNIPROTKB|Q6ZKI8 - symbol:OJ1119_D01.9 "BHLH transcriptio... 211 3.2e-17 1
TAIR|locus:2079102 - symbol:PYE "AT3G47640" species:3702 ... 206 1.1e-16 1
TAIR|locus:2086198 - symbol:bHLH34 "AT3G23210" species:37... 199 9.0e-16 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 196 1.3e-15 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 117 0.00013 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 111 0.00036 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 116 0.00040 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 113 0.00042 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 110 0.00044 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 109 0.00086 1
UNIPROTKB|Q6YW41 - symbol:B1131G07.17 "Basic helix-loop-h... 114 0.00090 1
>TAIR|locus:2092216 [details] [associations]
symbol:bHLH121 "AT3G19860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB025631
HOGENOM:HOG000005852 EMBL:AF488633 EMBL:AY065107 EMBL:AY081703
IPI:IPI00517171 IPI:IPI00657162 RefSeq:NP_001030729.1
RefSeq:NP_188620.1 UniGene:At.20167 ProteinModelPortal:Q9LT23
SMR:Q9LT23 IntAct:Q9LT23 STRING:Q9LT23 EnsemblPlants:AT3G19860.2
GeneID:821523 KEGG:ath:AT3G19860 TAIR:At3g19860 eggNOG:NOG237057
InParanoid:Q9LT23 OMA:GSIPMHP PhylomeDB:Q9LT23
ProtClustDB:CLSN2684712 Genevestigator:Q9LT23 Uniprot:Q9LT23
Length = 337
Score = 477 (173.0 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 95/124 (76%), Positives = 110/124 (88%)
Query: 8 EGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDL 67
E EV D +A RK QKA REKLRR++LNEHF ELGN LDP+RPKNDKATIL DTVQLLK+L
Sbjct: 50 EEEVMDVSA-RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKEL 108
Query: 68 TSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPW-AAM 126
TS+V KLK+E+ ALT+ESRELTQEKNDLREEK SL+S+IENLN+QYQQR+R+M PW AAM
Sbjct: 109 TSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAM 168
Query: 127 DHSV 130
DH+V
Sbjct: 169 DHTV 172
Score = 236 (88.1 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 55/142 (38%), Positives = 73/142 (51%)
Query: 159 YPMFGNQNPGVIPNPCSTFVPYMAPNTLVEXXXXXXXXXXXXXXGRSQGSAKEDSGNKSS 218
Y FGNQNP +IP PC T++PYM PNT+VE ++ G+ + K S
Sbjct: 202 YTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSVHIP--------QNPGNRSREPRAKVS 253
Query: 219 GESKIEKNEDSNDVTTDLELKTPGSTTDQDLPSGQRKSKKSLRKENSFT---NGXXXXXX 275
ES+ EK EDSN+V T LELKTPGST+D+D K+K+ R N+ + +
Sbjct: 254 RESRSEKAEDSNEVATQLELKTPGSTSDKDTLQRPEKTKRCKRNNNNNSIEESSHSSKCS 313
Query: 276 XXXXXXXXXXXXXVAGGRKADD 297
VAGG+K DD
Sbjct: 314 SSPSVRDHSSSSSVAGGQKPDD 335
>UNIPROTKB|Q67U21 [details] [associations]
symbol:OSJNBa0065F08.2 "Basic helix-loop-helix-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG237057
EMBL:HQ858850 EMBL:AP005770 EMBL:AK069790 EMBL:AK103986
RefSeq:NP_001046730.1 UniGene:Os.52897
EnsemblPlants:LOC_Os02g23823.1 GeneID:4329217 KEGG:osa:4329217
OMA:RNDKATI ProtClustDB:CLSN2692698 Uniprot:Q67U21
Length = 343
Score = 447 (162.4 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 84/127 (66%), Positives = 106/127 (83%)
Query: 4 SQKNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQL 63
S K E + + ATRK+QKADREK+RRDRLNE F ELG+ LDPDRP+NDKATIL+D +Q+
Sbjct: 26 SGKTECKTQGSIATRKVQKADREKMRRDRLNEQFQELGSTLDPDRPRNDKATILSDAIQM 85
Query: 64 LKDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPW 123
LKDLTSQV KLK E+ +L+EE+RELTQEKN+LR+EK+SL+ E++NLN QYQQR+R + PW
Sbjct: 86 LKDLTSQVNKLKAEYTSLSEEARELTQEKNELRDEKVSLKFEVDNLNTQYQQRMRVLYPW 145
Query: 124 AAMDHSV 130
M+ SV
Sbjct: 146 TGMEPSV 152
Score = 154 (59.3 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 42/151 (27%), Positives = 60/151 (39%)
Query: 159 YPMFGNQNPGVIPNPCSTFVPYMAP-NTLVEXXXXXXXXXXXXXXGRSQGSAKEDSGNKS 217
YP F NQ G + NPC+ ++ Y P + + S +DS +KS
Sbjct: 186 YPYFRNQTSGTVSNPCTPYMAYTQPIHPPTDQLSNQFSAPVQHSSSNRSHSMAQDSRSKS 245
Query: 218 SGESKIE---KNEDSNDVTTDLELKTPGSTTDQDLPSGQRKSKKSLRKENSF---TNGXX 271
S ++ K++D +DV TDLELKTPGS+ + S L+K+ F T G
Sbjct: 246 SALQQVSCRGKHDDFDDVATDLELKTPGSSAPLQSEIANKDSSSDLKKKQQFIQETKGSS 305
Query: 272 XXXXXXXXXXXXXX-----XXXVAGGRKADD 297
+ GG ADD
Sbjct: 306 LTEGSSSSSRCSSSGPPDVSNSIEGGSVADD 336
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 368 (134.6 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 67/103 (65%), Positives = 89/103 (86%)
Query: 21 QKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
QKA+REKLRRD+L E F ELGNALDP+RPK+DKA++L DT+Q+LKD+ +QV++LK E+
Sbjct: 48 QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 107
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPW 123
L++ESREL QEK++LREEK +L+S+IE LN QYQ R++ MVPW
Sbjct: 108 LSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW 150
Score = 64 (27.6 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 32/103 (31%), Positives = 43/103 (41%)
Query: 175 STFVPYMAP-NTLVEXXXXXXXXXXXXXXGRSQGSAKEDSGNK--------SSGESKIEK 225
S+F+PY A N L E + S K+DS K +S S +
Sbjct: 168 SSFIPYSASVNPLTEQQASVQQHSSSS----ADASMKQDSKIKPLDLDLMMNSNHSG-QG 222
Query: 226 NEDSNDVTTDLELKTPGSTTDQDLPSGQRKSKKSLRKENSFTN 268
N+ +DV LELK S+ Q SG+ K K SL S +N
Sbjct: 223 NDQKDDVRLKLELKIHASSLAQQDVSGKEK-KVSLTTTASSSN 264
>UNIPROTKB|Q69V10 [details] [associations]
symbol:P0506F02.119 "cDNA clone:J023068N18, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008213
EMBL:CM000144 EMBL:HQ858856 EMBL:AP004260 EMBL:AP004306
EMBL:AK070963 RefSeq:NP_001060350.1 UniGene:Os.34549 STRING:Q69V10
EnsemblPlants:LOC_Os07g43530.1 EnsemblPlants:LOC_Os07g43530.2
GeneID:4343984 KEGG:osa:4343984 eggNOG:NOG310955 OMA:NESHYVA
ProtClustDB:CLSN2693968 Uniprot:Q69V10
Length = 265
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/112 (41%), Positives = 74/112 (66%)
Query: 13 DCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVE 72
D A +++ K++REKL+RD+ N+ F ELGN L+PDR N KA +L +T ++LKDL SQVE
Sbjct: 31 DKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLSQVE 90
Query: 73 KLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWA 124
L+ E+++L ES + E+N+L ++ LR+EI L + + R+ W+
Sbjct: 91 SLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWS 142
>UNIPROTKB|Q2R1K8 [details] [associations]
symbol:Os11g0601700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 EMBL:AP008217 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000148 HOGENOM:HOG000070871 RefSeq:NP_001068228.1
UniGene:Os.27243 EnsemblPlants:LOC_Os11g38870.1 GeneID:4350864
KEGG:osa:4350864 eggNOG:NOG323604 OMA:LVSERQY
ProtClustDB:CLSN2698640 Uniprot:Q2R1K8
Length = 278
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 16 ATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLK 75
A +K KA+REKL+RD+LN+ F EL + LDP+R + KAT+L D ++L+DL SQVE L+
Sbjct: 45 APKKTHKAEREKLKRDQLNDLFVELSSMLDPERQNSGKATVLGDAARVLRDLVSQVESLR 104
Query: 76 TEHAALTEESRELTQEKNDLREEKLSLRSEIENLN 110
E +AL E + + E N+L+EE + LR++I L+
Sbjct: 105 KEQSALLTERQYVGSENNELQEENIMLRAQILELH 139
>TAIR|locus:2157538 [details] [associations]
symbol:ILR3 "AT5G54680" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022214
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000238732 UniGene:At.49177
UniGene:At.9639 EMBL:AF488629 EMBL:AY054585 EMBL:BT002189
EMBL:AY086197 IPI:IPI00530460 RefSeq:NP_200279.1
ProteinModelPortal:Q9FH37 SMR:Q9FH37 IntAct:Q9FH37 STRING:Q9FH37
EnsemblPlants:AT5G54680.1 GeneID:835557 KEGG:ath:AT5G54680
TAIR:At5g54680 eggNOG:NOG277469 InParanoid:Q9FH37 OMA:MASPEGT
PhylomeDB:Q9FH37 ProtClustDB:CLSN2916456 Genevestigator:Q9FH37
Uniprot:Q9FH37
Length = 234
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 51/116 (43%), Positives = 74/116 (63%)
Query: 6 KNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRP-KNDKATILADTVQLL 64
K G + +AT KA REK RRDRLN+ F ELG L+P P K DKA IL D V+++
Sbjct: 62 KKRGRCESSSATSS--KACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMV 119
Query: 65 KDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAM 120
L + +KLK +++L ++ +EL EKN+LR+EK L++E E L +Q+++AM
Sbjct: 120 TQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKL----EQQLKAM 171
>UNIPROTKB|Q6ZGM4 [details] [associations]
symbol:OJ1442_E05.19 "cDNA clone:006-303-B03, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG277469
EMBL:AP004121 EMBL:EU837263 EMBL:HQ858854 EMBL:AK060881
EMBL:AK103434 EMBL:AK104188 RefSeq:NP_001045680.1 UniGene:Os.17893
EnsemblPlants:LOC_Os02g02480.1 EnsemblPlants:LOC_Os02g02480.3
GeneID:4328080 KEGG:osa:4328080 OMA:AIFCDGG Uniprot:Q6ZGM4
Length = 236
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 47/108 (43%), Positives = 71/108 (65%)
Query: 22 KADREKLRRDRLNEHFTELGNALDPDRP-KNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
KA REK+RRDRLN+ F EL + ++PD+ K DKA IL+D +LL +L + EKLK +
Sbjct: 71 KACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKESNEK 130
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWAAMDH 128
L E ++L EKN+LR+EK++L++E E L + Q + ++ P + H
Sbjct: 131 LRETIKDLKVEKNELRDEKVTLKAEKERL--EQQVKALSVAPTGFVPH 176
>UNIPROTKB|Q6ZKI8 [details] [associations]
symbol:OJ1119_D01.9 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HQ858852 EMBL:AP003876 EMBL:AK102951
RefSeq:NP_001060960.1 UniGene:Os.18333 IntAct:Q6ZKI8
EnsemblPlants:LOC_Os08g04390.2 GeneID:4344627 KEGG:osa:4344627
OMA:REKMRRN Uniprot:Q6ZKI8
Length = 253
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 46/119 (38%), Positives = 75/119 (63%)
Query: 11 VKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRP-KNDKATILADTVQLLKDLTS 69
V+ + R KA REK+RRD++N+ F ELG L+P +P K+DKA IL+D +++ L +
Sbjct: 76 VRSGSCGRPTSKASREKIRRDKMNDRFLELGTTLEPGKPVKSDKAAILSDATRMVIQLRA 135
Query: 70 QVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWAAMDH 128
+ ++LK + +L ++ +EL EK++LR+EK L+ E E L + Q ++ P A M H
Sbjct: 136 EAKQLKDTNESLEDKIKELKAEKDELRDEKQKLKVEKETL--EQQVKILTATP-AYMPH 191
>TAIR|locus:2079102 [details] [associations]
symbol:PYE "AT3G47640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IMP] [GO:0055072 "iron ion homeostasis" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
EMBL:AY080786 EMBL:AY114018 EMBL:AL132955 EMBL:AF488582
IPI:IPI00539041 PIR:T45724 RefSeq:NP_001190029.1
RefSeq:NP_001190030.1 RefSeq:NP_190348.1 UniGene:At.43911
ProteinModelPortal:Q9SN74 SMR:Q9SN74 IntAct:Q9SN74 STRING:Q9SN74
PRIDE:Q9SN74 EnsemblPlants:AT3G47640.1 EnsemblPlants:AT3G47640.2
EnsemblPlants:AT3G47640.3 GeneID:823918 KEGG:ath:AT3G47640
TAIR:At3g47640 eggNOG:NOG254857 HOGENOM:HOG000070871
InParanoid:Q9SN74 OMA:QSKPDLN PhylomeDB:Q9SN74
ProtClustDB:CLSN2913351 Genevestigator:Q9SN74 GO:GO:0010106
Uniprot:Q9SN74
Length = 240
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/105 (40%), Positives = 66/105 (62%)
Query: 18 RKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTE 77
+++ KA RE+L+R+ LNE F EL + L+ ++ + KA+IL + + LKD+ Q+E L+ E
Sbjct: 28 KRINKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDVFGQIESLRKE 87
Query: 78 HAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVP 122
HA+L ES +T EKN+L+EE L +EI L + + R P
Sbjct: 88 HASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKP 132
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 199 (75.1 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 46/120 (38%), Positives = 74/120 (61%)
Query: 3 CSQKNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDR-PKNDKATILADTV 61
CS K C+ + KA REKLRR++LN+ F +L + L+P R PK DK+ IL D +
Sbjct: 151 CSGKRR-RTGSCS--KPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAI 207
Query: 62 QLLKDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMV 121
+++ L + +L+ + L EE + L +KN+LREEKL L++E E + +Q++++MV
Sbjct: 208 RVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKM----EQQLKSMV 263
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 46/111 (41%), Positives = 65/111 (58%)
Query: 3 CSQKNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDR-PKNDKATILADTV 61
CS+K C+ KA RE+LRR++LNE F +L + L+P R PK DK IL D +
Sbjct: 118 CSRKR-ARTGSCSRGGGT-KACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAI 175
Query: 62 QLLKDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQ 112
++L L + KL+ + L EE + L EKN+LREEKL L+++ E Q
Sbjct: 176 RILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQ 226
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 10 EVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTS 69
+ K AA++ +A+R RR+R+N H +L + L P+ K DKA++LA+ +Q +K+L
Sbjct: 126 DAKALAASKSHSEAERR--RRERINTHLAKLRSIL-PNTTKTDKASLLAEVIQHMKELKR 182
Query: 70 QVEKLKTEHAALTEESRELTQEK--NDLREEKLSLRS 104
Q ++ T+ + E +LT + ND E L +R+
Sbjct: 183 QTSQI-TDTYQVPTECDDLTVDSSYND-EEGNLVIRA 217
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 111 (44.1 bits), Expect = 0.00036, P = 0.00036
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 7 NEGEVKDCAATRKMQ-KADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLK 65
+ G + R ++ ++ E+ RR+R+N H T L + PD + DKAT+LA V +K
Sbjct: 53 SSGSGRSATEARALKIHSEAERRRRERINAHLTTLRRMI-PDTKQMDKATLLARVVDQVK 111
Query: 66 DLTSQVEKLKTEHAALTEESRELTQE 91
DL + ++ T+ L E+ E++ E
Sbjct: 112 DLKRKASEI-TQRTPLPPETNEVSIE 136
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 116 (45.9 bits), Expect = 0.00040, P = 0.00040
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTEES 85
EK RR++LNE F L + + P K DK +IL DT++ L+DL +V++L++ + E+
Sbjct: 410 EKKRREKLNERFMTLRSII-PSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTET 468
Query: 86 R--ELTQEKNDLREEKLS 101
R + ++K D EE+ S
Sbjct: 469 RITMMKRKKPDDEEERAS 486
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 10 EVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTS 69
+ K AA++ +A+R RR+R+N H +L + L P+ K DKA++LA+ +Q +K+L
Sbjct: 168 DAKALAASKSHSEAERR--RRERINNHLAKLRSIL-PNTTKTDKASLLAEVIQHVKELKR 224
Query: 70 QVEKLKTEHAALTEESRELT 89
+ + + TE S ELT
Sbjct: 225 ETSVISETNLVPTE-SDELT 243
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 110 (43.8 bits), Expect = 0.00044, P = 0.00044
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 15 AATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQ-VEK 73
AA R ++A+R RR+R+N H +L N L + K DKAT+LA VQ +++L Q +E
Sbjct: 66 AALRNHKEAERR--RRERINSHLNKLRNVLSCNS-KTDKATLLAKVVQRVRELKQQTLET 122
Query: 74 LKTEHAALTEESRELT 89
++ L E+ E++
Sbjct: 123 SDSDQTLLPSETDEIS 138
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 109 (43.4 bits), Expect = 0.00086, P = 0.00086
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 15 AATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKL 74
AA +++ E+ RR+++N+ F EL +A+ P K DKATIL+D +++L +++ L
Sbjct: 124 AAYAQLEHVVAERKRREKINQRFMEL-SAVIPKLKKMDKATILSDAASYIRELQEKLKAL 182
Query: 75 KTEHAALTEESRELT 89
+ + AA E+ T
Sbjct: 183 EEQAAARVTEAAMAT 197
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 114 (45.2 bits), Expect = 0.00090, P = 0.00090
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTEES 85
E+ RR+RLNE F L L P K DKAT+LA T++ + L +Q+ +L+ ++ AL +
Sbjct: 519 ERRRRERLNESFEHLRGLLPPGS-KKDKATVLAKTLEYMNLLIAQISELEAKNRALQTQI 577
Query: 86 RELTQEKNDLREEKLSLRSEIEN 108
+ + R + +E+ +
Sbjct: 578 HQRANGSSSSRSSMIRTVNEVHH 600
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.126 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 299 238 0.00091 113 3 11 23 0.41 34
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 582 (62 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.97u 0.09s 29.06t Elapsed: 00:00:01
Total cpu time: 28.97u 0.09s 29.06t Elapsed: 00:00:01
Start: Thu May 9 14:04:41 2013 End: Thu May 9 14:04:42 2013