BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022288
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121
PE=2 SV=1
Length = 337
Score = 302 bits (774), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/295 (64%), Positives = 225/295 (76%), Gaps = 14/295 (4%)
Query: 8 EGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDL 67
E EV D +A RK QKA REKLRR++LNEHF ELGN LDP+RPKNDKATIL DTVQLLK+L
Sbjct: 50 EEEVMDVSA-RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKEL 108
Query: 68 TSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPW-AAM 126
TS+V KLK+E+ ALT+ESRELTQEKNDLREEK SL+S+IENLN+QYQQR+R+M PW AAM
Sbjct: 109 TSEVNKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAM 168
Query: 127 DHSVMMA-PPSYPYPVPMPMPPGAIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPYMAPNT 185
DH+VMMA PPS+PYP+P+ MPPG+IPMHP M Y FGNQNP +IP PC T++PYM PNT
Sbjct: 169 DHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNT 228
Query: 186 LVEQQSAQYASAVAQPSGRSQGSAKEDSGNKSSGESKIEKNEDSNDVTTDLELKTPGSTT 245
+VEQQS P RS+ + K S ES+ EK EDSN+V T LELKTPGST+
Sbjct: 229 VVEQQSVHIPQ---NPGNRSR-----EPRAKVSRESRSEKAEDSNEVATQLELKTPGSTS 280
Query: 246 DQDLPSGQRKSKKSLR--KENSFTNGSSSSRCSSSRSVQD-SSSNSVAGGRKADD 297
D+D K+K+ R NS S SS+CSSS SV+D SSS+SVAGG+K DD
Sbjct: 281 DKDTLQRPEKTKRCKRNNNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPDD 335
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2
SV=2
Length = 286
Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 155/281 (55%), Gaps = 60/281 (21%)
Query: 21 QKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
QKA+REKLRRD+L E F ELGNALDP+RPK+DKA++L DT+Q+LKD+ +QV++LK E+
Sbjct: 48 QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 107
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWAAMDHSVMMAPPSYPYP 140
L++ESREL QEK++LREEK +L+S+IE LN QYQ R++ MVPW P Y Y
Sbjct: 108 LSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWV----------PHYSYH 157
Query: 141 VPMPMPPGAIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPYMAP-NTLVEQQSAQYASAVA 199
+P I S+F+PY A N L EQQ AS
Sbjct: 158 IPFV------------------------AITQGQSSFIPYSASVNPLTEQQ----ASVQQ 189
Query: 200 QPSGRSQGSAKEDSGNK-----------SSGESKIEKNEDSNDVTTDLELKTPGSTTDQD 248
S + S K+DS K SG+ N+ +DV LELK S+ Q
Sbjct: 190 HSSSSADASMKQDSKIKPLDLDLMMNSNHSGQG----NDQKDDVRLKLELKIHASSLAQQ 245
Query: 249 LPSGQRKSKKSLRKENSFTNGSSSSRCSSSRSVQDSSSNSV 289
SG+ K K SL T SSS+ S S++VQDSS +V
Sbjct: 246 DVSGKEK-KVSLT-----TTASSSNSYSLSQAVQDSSPGTV 280
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 25/183 (13%)
Query: 6 KNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRP-KNDKATILADTVQLL 64
K G + +AT KA REK RRDRLN+ F ELG L+P P K DKA IL D V+++
Sbjct: 62 KKRGRCESSSATS--SKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMV 119
Query: 65 KDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMVPWA 124
L + +KLK +++L ++ +EL EKN+LR+EK L++E E L +Q+++A
Sbjct: 120 TQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKL----EQQLKA----- 170
Query: 125 AMDHSVMMAP-PSYPYPVPMPMPPGAIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPYMAP 183
M AP PS+ +P P PM P A P GN+ +I P +M P
Sbjct: 171 ------MNAPQPSF-FPAP-PMMPTAFASAQGQAP----GNKMVPIISYPGVAMWQFMPP 218
Query: 184 NTL 186
++
Sbjct: 219 ASV 221
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 16/136 (11%)
Query: 22 KADREKLRRDRLNEHFTELGNALDPDR-PKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
KA REKLRR++LN+ F +L + L+P R PK DK+ IL D ++++ L + +L+ +
Sbjct: 167 KACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQK 226
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAMV-----------PWAAMDHS 129
L EE + L +KN+LREEKL L++E E + +Q++++MV P A H
Sbjct: 227 LLEEIKSLKADKNELREEKLVLKAEKEKM----EQQLKSMVVPSPGFMPSQHPAAFHSHK 282
Query: 130 VMMAPPSYPYPVPMPM 145
+ +A P YP MPM
Sbjct: 283 MAVAYPYGYYPPNMPM 298
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 81/134 (60%), Gaps = 17/134 (12%)
Query: 22 KADREKLRRDRLNEHFTELGNALDPDR-PKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
KA RE+LRR++LNE F +L + L+P R PK DK IL D +++L L + KL+ +
Sbjct: 135 KACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQK 194
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVRAM-------VPW--AAMDHSVM 131
L EE + L EKN+LREEKL L+++ E + +Q++++M +P AA +H+ M
Sbjct: 195 LLEEIKSLKAEKNELREEKLVLKADKE----KTEQQLKSMTAPSSGFIPHIPAAFNHNKM 250
Query: 132 MAPPSYPYPVPMPM 145
PSY Y MPM
Sbjct: 251 AVYPSYGY---MPM 261
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2
SV=1
Length = 240
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%)
Query: 18 RKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTE 77
+++ KA RE+L+R+ LNE F EL + L+ ++ + KA+IL + + LKD+ Q+E L+ E
Sbjct: 28 KRINKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDVFGQIESLRKE 87
Query: 78 HAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQR 116
HA+L ES +T EKN+L+EE L +EI L + + R
Sbjct: 88 HASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEAR 126
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115
PE=2 SV=1
Length = 226
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 11 VKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDR-PKNDKATILADTVQLLKDLTS 69
+K + T KA REK RRDRLN+ FTEL + L+P R PK DK I+ D ++++
Sbjct: 60 IKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARD 119
Query: 70 QVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQ 114
+ +KLK +++L E+ +EL EKN+LR+EK L+ E E ++ Q +
Sbjct: 120 EAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLK 164
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTEES 85
EK RR++LNE F L ++ P K DK +IL DT++ L+DL +V++L++ + E+
Sbjct: 410 EKKRREKLNERFMTL-RSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTET 468
Query: 86 R 86
R
Sbjct: 469 R 469
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
E+ RR +LNE L +AL P K DKAT+L D ++ LK L +V+KL+ E
Sbjct: 137 ERKRRQKLNERLIAL-SALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 20 MQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHA 79
+ + E++RR++LN F L A+ P+ K DK ++L D V + +L S+ E ++ E
Sbjct: 342 LNHVEAERMRREKLNHRFYAL-RAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKH 400
Query: 80 AL---TEESRELTQEKNDL-----REEKLSLRSEIE 107
A+ E +E+ ++N + EEK S +IE
Sbjct: 401 AIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIE 436
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 20 MQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTE 77
+ + EK RR++LN F L A+ P + DKA++L+D V ++ L S+++ L+TE
Sbjct: 248 LSHVEAEKQRREKLNHRFYAL-RAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 9 GEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLT 68
G ++ +AT+ ++R+ RR++LNE F L +L P + +KA+ILA+T+ LK+L
Sbjct: 408 GAAQEMSATKNHVMSERK--RREKLNEMFLVL-KSLLPSIHRVNKASILAETIAYLKELQ 464
Query: 69 SQVEKLKT 76
+V++L++
Sbjct: 465 RRVQELES 472
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTEES 85
EK RR++LNE F L + P K DK +IL DT++ L++L +V++L++ + E+
Sbjct: 446 EKKRREKLNERFMTLRKII-PSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTET 504
Query: 86 R 86
R
Sbjct: 505 R 505
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 20 MQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHA 79
+ + E+ RR++LN+ F L A+ P+ K DKA++LAD + + D+ ++ +TE
Sbjct: 319 LNHVEAERQRREKLNQRFYAL-RAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
Query: 80 ALT-EESRELTQEKNDLRE 97
+ ES ++T + D ++
Sbjct: 378 IMKRRESNQITPAEVDYQQ 396
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 9 GEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLT 68
G ++ + T E+ RR++LNE F L +L P + +KA+ILA+T+ LK+L
Sbjct: 404 GAAQEMSGTGTKNHVMSERKRREKLNEMFLVL-KSLLPSIHRVNKASILAETIAYLKELQ 462
Query: 69 SQVEKLKT 76
+V++L++
Sbjct: 463 RRVQELES 470
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 6 KNEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLK 65
K++ E K+ AA + +D E+ RR R+N F L L P+ K DKA++L +TV+
Sbjct: 83 KSKTESKEVAAKKH---SDAERRRRLRINSQFATLRTIL-PNLVKQDKASVLGETVRYFN 138
Query: 66 DLTSQVEKLKT 76
+L V+ + T
Sbjct: 139 ELKKMVQDIPT 149
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 18 RKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTE 77
RK+ +RE RR + F +L N L P+ KND+A+I+ + + +K+L +++ K
Sbjct: 215 RKIFPTERE--RRVHFKDRFGDLKN-LIPNPTKNDRASIVGEAIDYIKELLRTIDEFKL- 270
Query: 78 HAALTEESR--ELTQEKNDLREEKLSLRSEI 106
L E+ R + +E +D+ +E +SE+
Sbjct: 271 ---LVEKKRVKQRNREGDDVVDENFKAQSEV 298
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAA 80
E+ RR++L+E F L AL P K DK TIL D + +K L Q+ LK E A
Sbjct: 124 ERKRREKLSEKFIALS-ALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 20 MQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHA 79
+ + E+ RR++LN+ F L + + P+ K DKA++L D + +K+L +V+ ++ E
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVV-PNISKMDKASLLGDAISYIKELQEKVKIMEDERV 452
Query: 80 A 80
Sbjct: 453 G 453
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 16 ATRKMQKADR------EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTS 69
TRK K DR E+ RR R+ + L +L P+ K DKA+I+ D V +++L S
Sbjct: 121 GTRKT-KTDRSRTLISERRRRGRMKDKLYAL-RSLVPNITKMDKASIVGDAVLYVQELQS 178
Query: 70 QVEKLKTEHAAL 81
Q +KLK++ A L
Sbjct: 179 QAKKLKSDIAGL 190
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDL 67
EK RRDR+N H T L L P+ K DKA +LA ++ +K+L
Sbjct: 71 EKRRRDRINSHLTAL-RKLVPNSDKLDKAALLATVIEQVKEL 111
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 7 NEGEVKDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKD 66
N G + +RK + + E+ RR N+ F +L N L P+ K D+A+I+ + + +K+
Sbjct: 233 NNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKN-LIPNPTKIDRASIVGEAIDYIKE 291
Query: 67 LTSQVEKLK 75
L +E+ K
Sbjct: 292 LLRTIEEFK 300
>sp|Q8TRL1|RAD50_METAC DNA double-strand break repair Rad50 ATPase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=rad50 PE=3 SV=1
Length = 1074
Score = 38.1 bits (87), Expect = 0.075, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 24 DREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLT---SQVEKLKTEHAA 80
++E L RDR NE T+LG +L +K T + V+L K+L + V K TE A
Sbjct: 423 EKESLLRDRKNEASTKLGLSL------KEKETCDLNLVELEKELQNAGAAVRKGSTEIEA 476
Query: 81 LTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQ 115
L +E RE ++ D++E+K + +E++ L Q
Sbjct: 477 LEKELRENSKAVLDIQEQKSEVLAELKGLGFAADQ 511
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 EKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEH 78
E+ RR++LNE F L ++ P K DK +IL DT+ + L +V +L+ H
Sbjct: 368 ERRRREKLNEKFITL-RSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 19 KMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKL---- 74
++Q E+ RR++LNE F L + L P K DKA++L+ + L L ++ KL
Sbjct: 287 QLQHMISERKRREKLNESFQALRSLLPPG-TKKDKASVLSIAREQLSSLQGEISKLLERN 345
Query: 75 KTEHAALTEESRELTQEKNDLR-EEKLSLR 103
+ A L E RE+ +NDLR EE+ ++R
Sbjct: 346 REVEAKLAGE-REI---ENDLRPEERFNVR 371
>sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropicalis GN=hes4 PE=2 SV=1
Length = 281
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 12 KDCAATRKMQKADREKLRRDRLNEHFTELG----NALDPDRPKN---DKATILADTVQLL 64
K + RK K EK RR R+NE +L +AL D ++ +KA IL TV+ L
Sbjct: 29 KSASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHL 88
Query: 65 KDLTSQVEKLKTEHAALTEESRELTQEK---NDLREEKLSLRSEIENLNIQYQQRVRAMV 121
++L ++++ AALT + L + + N+ E S E +N + + R+ +
Sbjct: 89 RNL----QRVQMT-AALTADPSVLGKYRAGFNECMNEVTRFLSTCEGVNTEVRTRLLGHL 143
Query: 122 P-----WAAMDHSV---------MMAPPSYPYPVPMPM---PPGAIP---MHPPMQPYPM 161
AM++ + P S P PVPMP P AI Q P
Sbjct: 144 SSCLGQIVAMNYQQPPSSQQPLHVQLPSSTPAPVPMPCKVNPAEAISPKVFQGGFQLVPA 203
Query: 162 FGNQNPGVIPNPCSTFVP 179
Q +IPNP T P
Sbjct: 204 TDGQFAFLIPNPAYTTSP 221
>sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Arabidopsis thaliana
GN=BHLH107 PE=2 SV=1
Length = 230
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 12 KDCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQ 70
K A+ R ++A+R+ RR R+N H +L L + K DK+T+LA VQ +K+L Q
Sbjct: 41 KALASLRNHKEAERK--RRARINSHLNKLRKLLSCN-SKTDKSTLLAKVVQRVKELKQQ 96
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 13 DCAATRKMQKADREKLRRDRLNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVE 72
D A+ + + + E+ RR ++NE F L + K D A+ L + + ++ L +V+
Sbjct: 41 DKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
Query: 73 KLKTEHAALTEESRELTQEKND 94
K + + ++E +LT +N+
Sbjct: 101 KYEGSYPGWSQEPTKLTPWRNN 122
>sp|P42774|GBF1_ARATH G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=2 SV=2
Length = 315
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 123 WAAMDHSVMMAPPSYPYPVPMPMPPGAIPMHPPMQPYPMFGNQNP 167
W A H MM P P P P PPGA+ HP M PM N P
Sbjct: 62 WGAQHH--MMPPYGTPVPYPAMYPPGAVYAHPSM---PMPPNSGP 101
>sp|E1BK52|STK10_BOVIN Serine/threonine-protein kinase 10 OS=Bos taurus GN=STK10 PE=3 SV=3
Length = 966
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 146 PPG--AIPMHPPMQPYPMFGNQNPGVIPNPCSTFVPY-MAPNTLV--EQQSAQYASAVAQ 200
PPG A+P P+ P GN+N +P P F P M V E+Q+A ++
Sbjct: 381 PPGHGALPATSPLDVAP--GNENGQAVPVPLRKFRPVSMGARIQVSEEKQAADQGGDLSP 438
Query: 201 PSGRSQGSAKEDSGNKSSGESKIEKNEDSNDVTTDLELKTPG--STTDQDLPSGQRKSKK 258
+ RSQ A + N S+ E+ ++E +N LEL TPG S + +D G +
Sbjct: 439 AASRSQ-KASQSRPNSSALETL--RSELTN---GSLELPTPGAQSLSKRDSDCGSVSTSG 492
Query: 259 SLRKENSFTNGSSSSRCSSSRSVQDS 284
S S + S ++ S S S++DS
Sbjct: 493 STDFGTSLSADMSVNKESGSLSIKDS 518
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1
SV=1
Length = 344
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 33 LNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTE 83
+N H +L + L P+ K DKA++LA+ +Q +K+L Q ++ + TE
Sbjct: 147 INTHLAKLRSIL-PNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTE 196
>sp|P12959|OP2_MAIZE Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1
Length = 453
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 64 LKDLTSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENL 109
LK+L QV +LK E++ L L Q+ ND + LR+++E L
Sbjct: 250 LKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETL 295
>sp|P39927|PTI1_YEAST Protein PTI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PTI1 PE=1 SV=2
Length = 425
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Query: 117 VRAMVPWAAMDHSVMMAPPSYPYPVPMPMPPGAIPMHP-PMQPYPMFGNQNPGVIPNPCS 175
+R P + V P + P V MPMP P P P+Q P FG PG P
Sbjct: 281 IRNNTPLHVPSNEVSNNPNNMPLNVAMPMPMSTPPFIPLPLQQQP-FGFAPPGPFMPPAQ 339
Query: 176 TFVPYMAPNTLVEQQSAQYASAVAQPSGRSQGSAKEDSGNKSSGESKIEKNEDSNDVTTD 235
P M L Q ++ G S + DSG + + ++ E+ D+
Sbjct: 340 G--PSMGQPVLANQLGQVQQQNISSTEGPSNANKANDSGTINMAKLQLLP-ENQQDMIKQ 396
Query: 236 LELKTPGSTTDQDLPSGQRKSKKSLRKE 263
+ TP Q LPS Q+ ++ RKE
Sbjct: 397 VLTLTPAQI--QSLPSDQQLMVENFRKE 422
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1
SV=1
Length = 368
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 33 LNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTSQVEKLKTEHAALTEESRELT 89
+N H +L + L P+ K DKA++LA+ +Q +K+L + + +E + ES ELT
Sbjct: 189 INNHLAKLRSIL-PNTTKTDKASLLAEVIQHVKELKRETSVI-SETNLVPTESDELT 243
>sp|P21520|SCA_DROME Protein scabrous OS=Drosophila melanogaster GN=sca PE=2 SV=3
Length = 799
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 12 KDCAATRKMQKADREKLRRDRLNEHFTELGNAL-DPDRPKNDKATIL---ADTVQLLKDL 67
++ AA R Q ++E+L + L + +E+ L D R ++ A + + T + L +
Sbjct: 178 EELAALRSSQSGNKERLTVEWLQQTISEIRKQLVDLQRTASNVAQDVQQRSSTFEDLATI 237
Query: 68 TSQVEKLKTEHAALTEESRELTQEKNDLREEKLSLRSEIENLNIQYQQRVR 118
S ++LK + AA E ++ +LREE L + ++ ++ QQR R
Sbjct: 238 RSDYQQLKLDLAAQRERQQQTEVYVQELREEMLQQEQDFQHALVKLQQRTR 288
>sp|Q9HC77|CENPJ_HUMAN Centromere protein J OS=Homo sapiens GN=CENPJ PE=1 SV=2
Length = 1338
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 11 VKDCAATRKMQKADREKLRRDR-LNEHFTELGNALDPDRPKNDKATILADTVQLLKDLTS 69
K+ A + +K + KL+++R + E +T + + + T+ L +DL
Sbjct: 953 AKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIADLREDLKR 1012
Query: 70 QVEKLKTEHAALTEESRELTQEKNDLREE 98
+ K + H+ L + + L +E DLREE
Sbjct: 1013 KETKWSSTHSRLRSQIQMLVRENTDLREE 1041
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.124 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,343,277
Number of Sequences: 539616
Number of extensions: 4892793
Number of successful extensions: 43331
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 1030
Number of HSP's that attempted gapping in prelim test: 34896
Number of HSP's gapped (non-prelim): 7119
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)