BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022290
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38838|WSS1_YEAST DNA damage response protein WSS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=WSS1 PE=1 SV=1
Length = 269
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 1 MRKHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELC 60
M+++ +KV L EF P + LLG+N+ G+++ LRLR E+ F P E I+ TMLHEL
Sbjct: 59 MKENHFKVTNLVEFYPRDQRLLGMNVNHGSKIMLRLRCSTDEFQFLPMECIMGTMLHELT 118
Query: 61 HNEYGPHNADFYKLWDEIRKECDELMAKGITGTGKGFDLPGRRLGGFS-----RQPPLSQ 115
HN +GPH+ FY DE+ + +G+ T G G+RLGG + R P
Sbjct: 119 HNLFGPHDKKFYNKLDELIGRQWVIEQRGLYDTFLG---NGQRLGGRANLRSNRYPMTGI 175
Query: 116 LRQSALAAAENR-ARHGALLPSGPNRIGGDSSIKAALSPIQAAAMAAERRLHDDMWCGSK 174
+ + + + G+L P G SSI SP + AA AAERR DD WCG
Sbjct: 176 STNTGIVRKRGKGVKLGSLHPEGI------SSIDRGNSPRELAAFAAERRYRDDRWCGET 229
Query: 175 SLNSDIDVREDVGSSTDA 192
N D + +++ SS +
Sbjct: 230 KNNKDQIISDNISSSLEV 247
>sp|O94580|YQ77_SCHPO Ubiquitin and WLM domain-containing protein C1442.07c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1442.07c PE=4 SV=1
Length = 282
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 1 MRKHKWKVRILSEFCPA-----NPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTM 55
M H+W V +LSE PA + LG+N GA ++LRLR +R F Y+ + T+
Sbjct: 142 MDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLR-TDRYDGFRDYKTVKSTL 200
Query: 56 LHELCHNEYGPHNADFYKLWDEIRKECD 83
+HEL HN +G H++ F++L+ ++ KE D
Sbjct: 201 IHELTHNVHGEHDSSFWELFRQLTKEAD 228
>sp|Q9P7B5|WSS1_SCHPO DNA damage response protein wss1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wss1 PE=3 SV=1
Length = 283
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 1 MRKHKWKVRILSEFCPANPSLLGINIGGGAEVKLRLRRPNREWDFFPYEQILDTMLHELC 60
M++H + V L E N G N G ++L LR + W P+E ++D LHELC
Sbjct: 64 MKEHGFGVTSLDE-VAYNAKFWGRNWNKGECIELVLRDASNRW--LPFEFVMDVFLHELC 120
Query: 61 HNEYGPHNADFYKLWDEIRKECDELMAKGITGTGK 95
H GPH+ F+ +R L AKG G GK
Sbjct: 121 HIWQGPHDRRFFSHLSTLRAALIALYAKGYKGPGK 155
>sp|P27398|CAND_DROME Calpain-D OS=Drosophila melanogaster GN=sol PE=1 SV=2
Length = 1594
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGNLKG--------WSCKFCTLDNSSLSERCLA 278
W C CTL+N A+ C CG + KS+ +++ W+C CTL NS S C A
Sbjct: 708 WTCKKCTLVNYSTAMACVVCGGSKLKSISSIEDMTLRKGEFWTCSHCTLKNSLHSPVCSA 767
Query: 279 CGEWR 283
C R
Sbjct: 768 CKSHR 772
>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2
Length = 708
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 32/96 (33%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQ--------------------------------RNKSV 254
W C+MCT LN P A+ C C +Q RNK
Sbjct: 88 WSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLN 147
Query: 255 GNLKGWSCKFCTLDNSSLSERCLACGEWRYSNGPPI 290
+ W+C CT +N + ++RC+ C R +N I
Sbjct: 148 TRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNIEAI 183
>sp|B1H2Q2|ZRAN1_XENTR Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis GN=zranb1 PE=2
SV=1
Length = 701
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 32/92 (34%)
Query: 220 AVDVGQMWQCNMCTLLNQPLALTCEACGTQR----------------------------- 250
+++ W C+MCT LN P A+ C C +QR
Sbjct: 76 SMETSTKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSSLRAIPSPIDPCEEY 135
Query: 251 -NKSVGNLKG--WSCKFCTLDNSSLSERCLAC 279
+++ N+KG W+C CT +N + +++C+ C
Sbjct: 136 NDRNKLNIKGQHWTCSACTYENCAKAKKCVVC 167
>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2
SV=1
Length = 701
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 49/138 (35%)
Query: 177 NSDIDV---REDVGSSTDASESSKTSSVSNNRSGQTSSLQPSSGQKAVDVGQMWQCNMCT 233
NS DV D+GS +SS + R + S++PSS W C +CT
Sbjct: 44 NSTPDVGSMERDIGSPLICPDSS-----ARPRVKSSYSMEPSSK---------WSCQICT 89
Query: 234 LLNQPLALTCEACGTQR------------------------------NKSVGNLKG--WS 261
LN P A+ C C +QR +++ N+KG W+
Sbjct: 90 YLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGLRSIPSPIDPCEEYNDRNKLNIKGQHWT 149
Query: 262 CKFCTLDNSSLSERCLAC 279
C CT +N + +++C+ C
Sbjct: 150 CSACTYENCAKAKKCVVC 167
>sp|A6QP16|ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1 OS=Bos taurus GN=ZRANB1 PE=2 SV=1
Length = 708
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 32/96 (33%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQ--------------------------------RNKSV 254
W C+MCT LN P A+ C C +Q RNK
Sbjct: 88 WSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLN 147
Query: 255 GNLKGWSCKFCTLDNSSLSERCLACGEWRYSNGPPI 290
+ W+C CT +N + +++C+ C R +N I
Sbjct: 148 TRTQHWTCSICTYENWAKAKKCVVCDHPRPNNIEAI 183
>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1
Length = 708
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 32/96 (33%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQ--------------------------------RNKSV 254
W C+MCT LN P A+ C C +Q RNK
Sbjct: 88 WSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLN 147
Query: 255 GNLKGWSCKFCTLDNSSLSERCLACGEWRYSNGPPI 290
+ W+C CT +N + +++C+ C R +N I
Sbjct: 148 TRTQHWTCSVCTYENWAKAKKCVVCDHPRPNNIEAI 183
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 227 WQCNMCTLLNQPLALTCEAC-----------GTQRNKSVGNLKG------WSCKFCTLDN 269
W C C +LN+P A+ C AC GT+ + G L+ W+C+ CT +N
Sbjct: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTGGLEPDLARGRWACQSCTFEN 363
Query: 270 SSLSERCLACGEWRYSNGPPI 290
+ + C C R + P +
Sbjct: 364 EAAAVLCSICERPRLAQPPSL 384
>sp|Q6NUB7|ZRN1B_XENLA Ubiquitin thioesterase zranb1-B OS=Xenopus laevis GN=zranb1-b PE=2
SV=1
Length = 701
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 46/130 (35%)
Query: 182 VREDVGSSTDASESSKTSSVSNNRSGQTSSLQPSSGQKAVDVGQMWQCNMCTLLNQPLAL 241
+ ++GS +SS V ++ S +TSS W C +CT LN P A+
Sbjct: 52 MEREIGSPLICPDSSARPRVKSSYSMETSS--------------KWSCQICTYLNWPRAI 97
Query: 242 TCEACGTQR------------------------------NKSVGNLKG--WSCKFCTLDN 269
C C +QR +++ N+KG W+C CT +N
Sbjct: 98 RCTQCLSQRRTRSPTESPQSSGSGLRSIPGPIDPCEEYNDRNKLNIKGQHWTCSACTYEN 157
Query: 270 SSLSERCLAC 279
+ +++C+ C
Sbjct: 158 CAKAKKCVVC 167
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGNLKG---------------WSCKFCTLDNSS 271
W C C LN+P A+ C C + V ++G W+C+ CT +N +
Sbjct: 300 WHCLTCATLNEPWAVFCAVCSQPKGCKVPGIEGSHGTGGLEPEPARDQWACQSCTFENEA 359
Query: 272 LSERCLACGEWRYSNGPPI 290
+ C C R + P +
Sbjct: 360 AAVLCAICERPRLAQPPSL 378
>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=2
Length = 3053
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGNLKGWSCKFCTLDNSSLSERCLAC 279
W+C++C + N+ A C AC + K W C C++ N + + +C+AC
Sbjct: 1473 WECSVCLVRNERSAKKCVACENPGKQ----FKEWHCSLCSVKNEAHAIKCVAC 1521
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 27/96 (28%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGN-------------------LKG-------- 259
W C++C++ N+ A+ C AC S+ +G
Sbjct: 1502 WHCSLCSVKNEAHAIKCVACNNPVTPSLSTAPPSFKFGTSEMSKPFRIGFEGMFAKKEGQ 1561
Query: 260 WSCKFCTLDNSSLSERCLACGEWRYSNGPPISTPGP 295
W C C + N + + C+AC N P P
Sbjct: 1562 WDCSLCFVRNEASATHCIACQYPNKQNQPTSCVSAP 1597
>sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2
Length = 3224
Score = 37.7 bits (86), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 27/129 (20%)
Query: 194 ESSKTSSVSNNRSGQTSSLQPSSGQKAVDVGQ--MWQCNMCTLLNQPLALTCEACG--TQ 249
++ TS+VS S +TS P SG + + + W C++C + N+ A C AC ++
Sbjct: 1694 QNQTTSAVSTPASSETSK-APKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCPSK 1752
Query: 250 RNKSVG---------------NLKG-------WSCKFCTLDNSSLSERCLACGEWRYSNG 287
+N++ +G W C C + N S S +C+AC + ++
Sbjct: 1753 QNQTTAISTPASSEISKAPKSGFEGMFIRKGQWDCSVCCVQNESSSLKCVACDASKPTHK 1812
Query: 288 PPISTPGPY 296
P P +
Sbjct: 1813 PIAEAPSAF 1821
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 31/100 (31%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRN-----------------------------KSVGNL 257
W C++C + N+P C AC ++ +SV +
Sbjct: 1419 WDCSICLVRNEPTVSRCIACQNTKSANKSGSSFVHQASFKFGQGDLPKPINSDFRSVFST 1478
Query: 258 K--GWSCKFCTLDNSSLSERCLACGEWRYSNGPPISTPGP 295
K W C C + N S +C AC R + P S P P
Sbjct: 1479 KEGQWDCSACLVQNEGSSTKCAACQNPRKQSLPATSIPTP 1518
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 29/114 (25%)
Query: 194 ESSKTSSVSNNRSGQTSSLQPSSGQKAVDVGQ--MWQCNMCTLLNQPLALTCEACGT--Q 249
++ TS+VS S +TS P SG + + + W C++C + N+ A C AC +
Sbjct: 1635 QNQTTSAVSTPASSETSK-APKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGK 1693
Query: 250 RNKSVGNLKG------------------------WSCKFCTLDNSSLSERCLAC 279
+N++ + W C C + N + + +C+AC
Sbjct: 1694 QNQTTSAVSTPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIAC 1747
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 260 WSCKFCTLDNSSLSERCLACGEWRYSN----GPPISTPGPYPGT 299
W C C+L N+S +++C++C SN GPP++ P T
Sbjct: 1356 WHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAETVFTPKT 1399
>sp|A0JMQ9|ZRN1B_DANRE Ubiquitin thioesterase zranb1-B OS=Danio rerio GN=zranb1b PE=2 SV=1
Length = 716
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 55/163 (33%), Gaps = 50/163 (30%)
Query: 171 CGSKSLNSDIDVREDVGSSTDASESSKTSSVSNNRSGQTSSLQPSS--------GQKAVD 222
C ++ N+ I E SS SS S+ + G T + P S + +
Sbjct: 27 CRAQRHNAPIITEEPFKSS-----SSLDPSLCTTQGGSTLLICPDSSARPRVRIADELPE 81
Query: 223 VGQMWQCNMCTLLNQPLALTCEACGTQ--------------------------------- 249
W C+MCT LN P A+ C C +Q
Sbjct: 82 TSSKWSCHMCTYLNWPRAIRCTQCLSQRQQGSQQHSPLSPSETPQTSGSRPSPVTSDPCE 141
Query: 250 ----RNKSVGNLKGWSCKFCTLDNSSLSERCLACGEWRYSNGP 288
RN+ + + W C CT +N S RC+ C + S P
Sbjct: 142 EYNDRNRLNMHAQRWPCSACTYENWPKSLRCVVCDHPKPSGSP 184
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 221 VDVGQMWQCNMCTLLNQPLALTCEACGTQRNKS 253
D+G W C CT N P A+ C C QR+ +
Sbjct: 2 TDLGLKWSCEYCTYENWPSAIKCTMCRAQRHNA 34
>sp|Q9VH90|TRBID_DROME Ubiquitin thioesterase trabid OS=Drosophila melanogaster GN=trbd
PE=1 SV=1
Length = 778
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 211 SLQPSSGQKAVDVG--QMWQCNMCTLLNQPLALTCEACGTQR 250
SLQP S + +V + W C +CT LN P +L C C T+R
Sbjct: 75 SLQPQSQARQSNVADSEKWPCKVCTYLNWPRSLRCVQCCTKR 116
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 205 RSGQTSSLQPSSGQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQRNKSVG 255
R +S+ P QK V + W CN CT N P ++ C CG R + +
Sbjct: 215 RESSSSAAVPPQQQKQCYVSK-WACNSCTYENWPRSIKCSMCGKTREREIS 264
>sp|Q9JLG8|CAN15_MOUSE Calpain-15 OS=Mus musculus GN=Solh PE=1 SV=1
Length = 1095
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 224 GQMWQCNMCTLLNQPLALTCEACGTQRNKSVGNL 257
G W C CTL N P+A +C ACG R S+ +
Sbjct: 150 GSGWACQRCTLHNTPVASSCSACGGPRKLSLPRI 183
Score = 34.7 bits (78), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 20/81 (24%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNK---------SVGNLKGWSCKFCTLDNSSLSERCL 277
W C CT LN C C R+K SV K W C CT N E C
Sbjct: 7 WSCARCTFLNPAGQRQCSICEAPRHKPDLDQILRLSVEEQK-WPCARCTFRNFLGKEACE 65
Query: 278 ACGEWRYSNGPPISTPGPYPG 298
CG TP P PG
Sbjct: 66 VCG----------FTPEPVPG 76
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 259 GWSCKFCTLDNSSLSERCLACGEWRYSNGPPI 290
GW+C+ CTL N+ ++ C ACG R + P I
Sbjct: 152 GWACQRCTLHNTPVASSCSACGGPRKLSLPRI 183
>sp|Q9NYJ8|TAB2_HUMAN TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Homo
sapiens GN=TAB2 PE=1 SV=1
Length = 693
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 214 PSSGQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQRN 251
P + D G W C CT LN P + CE C R+
Sbjct: 655 PKTQDTEDDEGAQWNCTACTFLNHPALIRCEQCEMPRH 692
>sp|Q99K90|TAB2_MOUSE TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Mus
musculus GN=Tab2 PE=1 SV=1
Length = 693
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 208 QTSSLQPSSGQKAVDV-GQMWQCNMCTLLNQPLALTCEACGTQRN 251
Q S+++ Q A D G W C CT LN P + CE C R+
Sbjct: 648 QRSTIKAPKTQDAEDEEGAQWNCTACTFLNHPALIRCEQCEMPRH 692
>sp|Q8K203|NEIL3_MOUSE Endonuclease 8-like 3 OS=Mus musculus GN=Neil3 PE=1 SV=1
Length = 606
Score = 34.7 bits (78), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 225 QMWQCNMCTLLNQPLALTCEACGTQR 250
+ W C +CTL+N+P A C+AC T R
Sbjct: 320 EQWSCVVCTLINRPSAKACDACLTTR 345
>sp|O75808|CAN15_HUMAN Calpain-15 OS=Homo sapiens GN=SOLH PE=2 SV=1
Length = 1086
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 27/80 (33%), Gaps = 18/80 (22%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGNL--------KGWSCKFCTLDNSSLSERCLA 278
W C CT LN C C R+K N + W C CT N E C
Sbjct: 7 WSCVRCTFLNPAGQRQCSICEAPRHKPDLNHILRLSVEEQKWPCARCTFRNFLGKEACEV 66
Query: 279 CGEWRYSNGPPISTPGPYPG 298
CG TP P PG
Sbjct: 67 CG----------FTPEPAPG 76
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 248 TQRNKSVGNLKGWSCKFCTLDNSSLSERCLACG 280
T + S + WSC CTL N +++ RC ACG
Sbjct: 332 TPASPSSPDFTTWSCAKCTLRNPTVAPRCSACG 364
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVGNL 257
W C CTL N P+A +C CG R S+ +
Sbjct: 147 WACPRCTLHNTPVASSCSVCGGPRRLSLPRI 177
>sp|E1BDF2|SHRPN_BOVIN Sharpin OS=Bos taurus GN=SHARPIN PE=3 SV=1
Length = 409
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 207 GQTSSLQPSSGQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQR 250
G + QP+S + W C CT +N P CE C TQR
Sbjct: 322 GLPPTPQPTSSSLPSPLQPGWPCPSCTFINAPSRPGCEMCSTQR 365
>sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus
GN=Zranb3 PE=1 SV=1
Length = 1069
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 227 WQCNMCTLLNQPLALTCEACGTQRNKSVG 255
WQC CT LN P CE C R+++ G
Sbjct: 621 WQCGFCTFLNNPGLPYCEMCENPRSRAAG 649
>sp|Q5RFW2|TAB2_DANRE TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Danio
rerio GN=tab2 PE=1 SV=1
Length = 711
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 14/30 (46%)
Query: 222 DVGQMWQCNMCTLLNQPLALTCEACGTQRN 251
D G W C CT LN P CE C RN
Sbjct: 681 DDGVQWSCTACTFLNHPALNRCEECEFPRN 710
>sp|Q5U303|TAB2_RAT TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 OS=Rattus
norvegicus GN=Tab2 PE=2 SV=2
Length = 693
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 224 GQMWQCNMCTLLNQPLALTCEACGTQRN 251
G W C CT LN P + CE C R+
Sbjct: 665 GAQWNCTACTFLNHPALIRCEQCEMPRH 692
>sp|Q8TAT5|NEIL3_HUMAN Endonuclease 8-like 3 OS=Homo sapiens GN=NEIL3 PE=1 SV=3
Length = 605
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 225 QMWQCNMCTLLNQPLALTCEACGTQR 250
+ W C +CTL+N+P + C+AC T R
Sbjct: 319 EHWTCVVCTLINKPSSKACDACLTSR 344
>sp|P31702|GSPE1_ERWCH Type II secretion system protein E OS=Erwinia chrysanthemi GN=outE
PE=3 SV=1
Length = 498
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 20/174 (11%)
Query: 130 HGALLPSGPNRIGGDSSIKAALSPIQAA---AMAAERRLHDDMW-CGSKSLNSDIDVRED 185
HG +L +GP G +++ AALSP+ +A M E + ++ G +N +D+
Sbjct: 254 HGIILVTGPTASGKSTTLYAALSPLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFA 313
Query: 186 VGSSTDASESSKTSSVSNNRSGQTSSLQPSSGQKAVDVGQMWQCN--------MCTLLNQ 237
G + V R G+T+ + + V N + + +
Sbjct: 314 RGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIE 373
Query: 238 PLALTCEACGTQRNKSVGNLKGWSCKFC----TLDNSSLSERCLACGEWRYSNG 287
P L+ G + V L C C T+D+ + LA G Y G
Sbjct: 374 PFLLSTSLLGVLAQRLVRTL----CPSCRQPYTIDHEQAEQTGLAAGTTLYHPG 423
>sp|P04821|CDC25_YEAST Cell division control protein 25 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC25 PE=1 SV=1
Length = 1589
Score = 32.7 bits (73), Expect = 3.6, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 109 RQPPLSQLRQSALAAAENRARHGALLPSGPNRIGGDSSIKAALSPIQAAAMAAERRLHDD 168
R P S+ S L+A+ + A H A SG N +++ SP A A+
Sbjct: 165 RNPSKSRRGSSTLSASLSNA-HNAETSSGHN-----NTVSMNNSPFSAPNDASH------ 212
Query: 169 MWCGSKSLNSDIDVREDVGSSTDASESSKTSSVSNNRSGQTSSLQPSSGQKA 220
+ S + NS+ + +D+ S D S T+++ NN ++LQ +SG+KA
Sbjct: 213 ITPQSSNFNSNASLSQDMTKSADGSSEMNTNAIMNNNE---TNLQ-TSGEKA 260
>sp|Q7ZXH3|TAB3_XENLA Mitogen-activated protein kinase kinase kinase 7-interacting
protein 3 homolog OS=Xenopus laevis GN=map3k7ip3 PE=2
SV=1
Length = 692
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 224 GQMWQCNMCTLLNQPLALTCEACGTQR 250
G W CN CT LN P CE C R
Sbjct: 664 GSPWNCNSCTFLNHPALNRCEQCEMPR 690
>sp|P49790|NU153_HUMAN Nuclear pore complex protein Nup153 OS=Homo sapiens GN=NUP153 PE=1
SV=2
Length = 1475
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 204 NRSGQT--SSLQPSSGQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQR 250
N+SG+T S+ G K V W C+ C + N+P A+ C AC T +
Sbjct: 701 NKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPK 749
>sp|Q8TAT6|NPL4_HUMAN Nuclear protein localization protein 4 homolog OS=Homo sapiens
GN=NPLOC4 PE=1 SV=3
Length = 608
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 217 GQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQRN 251
G MW C CT +NQP CE C R
Sbjct: 574 GSTHTATAAMWACQHCTFMNQPGTGHCEMCSLPRT 608
>sp|Q3MHN7|NEIL3_BOVIN Endonuclease 8-like 3 OS=Bos taurus GN=NEIL3 PE=2 SV=1
Length = 606
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 225 QMWQCNMCTLLNQPLALTCEACGTQR 250
+ W C +CTL+N+ + TC+AC T R
Sbjct: 321 EQWTCEVCTLINKLSSKTCDACLTSR 346
>sp|Q9ES54|NPL4_RAT Nuclear protein localization protein 4 homolog OS=Rattus norvegicus
GN=Nploc4 PE=1 SV=3
Length = 608
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 226 MWQCNMCTLLNQPLALTCEACGTQRN 251
MW C CT +NQP CE C R
Sbjct: 583 MWACQHCTFMNQPGTGHCEMCSLPRT 608
>sp|P60670|NPL4_MOUSE Nuclear protein localization protein 4 homolog OS=Mus musculus
GN=Nploc4 PE=1 SV=3
Length = 608
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 226 MWQCNMCTLLNQPLALTCEACGTQRN 251
MW C CT +NQP CE C R
Sbjct: 583 MWACQHCTFMNQPGTGHCEMCSLPRT 608
>sp|Q9H0F6|SHRPN_HUMAN Sharpin OS=Homo sapiens GN=SHARPIN PE=1 SV=1
Length = 387
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 213 QPSSGQKAVDVGQMWQCNMCTLLNQPLALTCEACGTQR 250
QP++ + W C CT +N P CE C TQR
Sbjct: 338 QPAASSLPSPLQPSWSCPSCTFINAPDRPGCEMCSTQR 375
>sp|P49791|NU153_RAT Nuclear pore complex protein Nup153 OS=Rattus norvegicus GN=Nup153
PE=1 SV=1
Length = 1468
Score = 32.0 bits (71), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 42/110 (38%)
Query: 226 MWQCNMCTLLNQPLALTCEACGTQR----------------------------------- 250
W C+ C + N+P A+ C AC T +
Sbjct: 724 TWDCDTCLVQNKPEAVKCVACETPKPGTGVKRALPLTVASESPVTASSSTTVTTGTLGFG 783
Query: 251 NKSVGNLKGWSCKFCTLDNSSLSERCLACGEWR-------YSNGPPISTP 293
+K + W C C + N + RC++C + SN P+S P
Sbjct: 784 DKFKRPVGSWECPVCCVSNKAEDSRCVSCTSEKPGLVSASSSNSVPVSLP 833
>sp|Q8N5C8|TAB3_HUMAN TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 OS=Homo
sapiens GN=TAB3 PE=1 SV=2
Length = 712
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 196 SKTSSVSNNRSGQTSSLQPSSGQKAVDV-GQMWQCNMCTLLNQPLALTCEACGTQR 250
++ ++ +R+G T S P + + D G W C+ CT LN P CE C R
Sbjct: 657 TQAAAADEHRTGSTQS--PRTQPRDEDYEGAPWNCDSCTFLNHPALNRCEQCEMPR 710
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,602,632
Number of Sequences: 539616
Number of extensions: 4880895
Number of successful extensions: 14697
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 14444
Number of HSP's gapped (non-prelim): 277
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)