Query 022296
Match_columns 299
No_of_seqs 116 out of 175
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 03:11:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qwg_A PSL synthase;, (2R)-pho 100.0 5.3E-92 1.8E-96 648.5 22.8 233 19-288 8-248 (251)
2 1u83_A Phosphosulfolactate syn 100.0 7.5E-91 2.6E-95 647.2 19.8 241 8-288 23-272 (276)
3 1ydn_A Hydroxymethylglutaryl-C 96.1 0.077 2.6E-06 48.4 12.8 160 40-240 82-262 (295)
4 3lmz_A Putative sugar isomeras 95.9 0.11 3.8E-06 45.1 12.6 126 102-272 31-166 (257)
5 3f4w_A Putative hexulose 6 pho 95.6 0.057 2E-06 46.1 9.2 144 39-239 11-158 (211)
6 3p6l_A Sugar phosphate isomera 95.6 0.22 7.4E-06 43.2 13.0 101 102-247 23-135 (262)
7 3qc0_A Sugar isomerase; TIM ba 95.5 0.082 2.8E-06 45.7 10.1 139 102-272 19-180 (275)
8 3l5l_A Xenobiotic reductase A; 95.4 0.013 4.4E-07 55.6 4.9 139 71-261 210-363 (363)
9 2ftp_A Hydroxymethylglutaryl-C 95.4 0.21 7.3E-06 45.9 12.9 156 41-239 87-265 (302)
10 3cqj_A L-ribulose-5-phosphate 95.3 0.16 5.5E-06 44.9 11.2 144 102-272 31-199 (295)
11 1yx1_A Hypothetical protein PA 95.2 0.2 6.7E-06 43.8 11.5 131 102-270 24-164 (264)
12 2cw6_A Hydroxymethylglutaryl-C 95.2 0.21 7.1E-06 45.8 12.0 158 39-239 82-262 (298)
13 3ble_A Citramalate synthase fr 95.0 0.48 1.6E-05 44.5 14.0 156 41-238 100-268 (337)
14 2q02_A Putative cytoplasmic pr 94.9 0.58 2E-05 40.3 13.6 139 102-274 20-175 (272)
15 1olt_A Oxygen-independent copr 94.8 0.37 1.3E-05 46.6 13.3 123 54-215 105-240 (457)
16 1rqb_A Transcarboxylase 5S sub 94.6 0.48 1.6E-05 47.8 13.9 142 43-236 52-211 (539)
17 3kws_A Putative sugar isomeras 94.6 0.29 1E-05 43.0 11.0 143 102-273 39-202 (287)
18 3ewb_X 2-isopropylmalate synth 94.3 0.36 1.2E-05 44.6 11.2 152 42-236 81-250 (293)
19 3bw2_A 2-nitropropane dioxygen 94.1 0.62 2.1E-05 43.7 12.8 65 102-217 110-174 (369)
20 1ep3_A Dihydroorotate dehydrog 94.0 0.54 1.9E-05 42.3 11.8 75 40-124 110-199 (311)
21 2x7v_A Probable endonuclease 4 93.9 0.32 1.1E-05 42.3 9.6 145 102-270 13-179 (287)
22 1nvm_A HOA, 4-hydroxy-2-oxoval 93.8 0.59 2E-05 43.8 12.0 164 26-239 85-250 (345)
23 1f76_A Dihydroorotate dehydrog 93.8 0.75 2.6E-05 42.4 12.5 79 40-126 152-250 (336)
24 3p6l_A Sugar phosphate isomera 93.8 0.24 8.2E-06 42.9 8.7 101 42-151 23-136 (262)
25 1tv8_A MOAA, molybdenum cofact 93.8 1.8 6E-05 39.5 14.8 101 39-152 51-168 (340)
26 2nx9_A Oxaloacetate decarboxyl 93.6 0.55 1.9E-05 46.4 11.7 147 44-237 36-195 (464)
27 3na8_A Putative dihydrodipicol 93.5 0.71 2.4E-05 42.9 11.7 144 102-285 46-225 (315)
28 3qja_A IGPS, indole-3-glycerol 93.3 0.64 2.2E-05 42.6 11.0 116 102-266 122-240 (272)
29 3eeg_A 2-isopropylmalate synth 93.3 0.25 8.5E-06 46.4 8.3 125 71-236 123-251 (325)
30 3zwt_A Dihydroorotate dehydrog 93.0 1.4 4.9E-05 41.9 13.3 77 42-127 162-260 (367)
31 3aal_A Probable endonuclease 4 93.0 0.98 3.4E-05 40.1 11.5 144 102-273 19-187 (303)
32 1ydo_A HMG-COA lyase; TIM-barr 93.0 0.71 2.4E-05 42.8 10.9 157 40-239 84-263 (307)
33 2nx9_A Oxaloacetate decarboxyl 92.7 1.6 5.5E-05 43.1 13.5 149 44-241 103-259 (464)
34 3tha_A Tryptophan synthase alp 92.6 0.92 3.1E-05 41.5 10.9 105 39-150 26-148 (252)
35 3aam_A Endonuclease IV, endoiv 92.6 1.3 4.5E-05 38.3 11.5 128 102-260 15-162 (270)
36 3iix_A Biotin synthetase, puta 92.5 2 6.7E-05 39.1 13.0 100 39-148 85-196 (348)
37 2zvr_A Uncharacterized protein 92.4 0.7 2.4E-05 40.7 9.6 45 102-148 42-86 (290)
38 3gr7_A NADPH dehydrogenase; fl 92.4 0.092 3.2E-06 49.4 4.0 121 71-241 196-327 (340)
39 3vni_A Xylose isomerase domain 92.3 0.58 2E-05 41.0 8.9 47 102-148 18-65 (294)
40 3si9_A DHDPS, dihydrodipicolin 92.2 2.1 7.1E-05 39.8 13.0 146 102-285 44-223 (315)
41 2ekc_A AQ_1548, tryptophan syn 92.1 1.8 6E-05 39.0 12.0 112 26-148 20-152 (262)
42 3q58_A N-acetylmannosamine-6-p 92.1 0.5 1.7E-05 42.1 8.2 84 107-236 94-179 (229)
43 1i4n_A Indole-3-glycerol phosp 92.0 0.74 2.5E-05 41.9 9.5 108 107-264 116-226 (251)
44 1qtw_A Endonuclease IV; DNA re 91.9 0.67 2.3E-05 40.2 8.8 45 102-146 13-63 (285)
45 2ftp_A Hydroxymethylglutaryl-C 91.9 0.75 2.6E-05 42.2 9.5 100 104-238 86-197 (302)
46 2g0w_A LMO2234 protein; putati 91.8 1.4 4.8E-05 39.1 11.0 136 102-270 37-185 (296)
47 3vnd_A TSA, tryptophan synthas 91.8 1.8 6.2E-05 39.6 11.9 103 39-148 30-153 (267)
48 2vc6_A MOSA, dihydrodipicolina 91.8 2 6.9E-05 39.2 12.2 143 102-285 22-201 (292)
49 3ivs_A Homocitrate synthase, m 91.8 1.2 4E-05 43.6 11.2 146 41-232 114-272 (423)
50 1rvg_A Fructose-1,6-bisphospha 91.8 2 7E-05 40.4 12.4 184 57-282 46-246 (305)
51 2p10_A MLL9387 protein; putati 91.5 1.1 3.9E-05 41.9 10.2 113 102-260 109-249 (286)
52 1r30_A Biotin synthase; SAM ra 91.4 2.2 7.6E-05 39.6 12.3 98 39-147 100-211 (369)
53 1pii_A N-(5'phosphoribosyl)ant 91.3 1.1 3.7E-05 44.3 10.4 107 107-263 123-231 (452)
54 3ngf_A AP endonuclease, family 91.3 2.3 8E-05 36.9 11.6 144 102-273 24-189 (269)
55 3obe_A Sugar phosphate isomera 91.2 0.68 2.3E-05 41.8 8.3 47 102-148 37-94 (305)
56 1jub_A Dihydroorotate dehydrog 91.2 2 6.9E-05 38.9 11.4 63 54-124 120-195 (311)
57 2z6i_A Trans-2-enoyl-ACP reduc 91.1 0.72 2.5E-05 42.7 8.6 132 42-238 27-161 (332)
58 3igs_A N-acetylmannosamine-6-p 91.1 0.78 2.7E-05 40.8 8.4 85 107-237 94-180 (232)
59 1ydn_A Hydroxymethylglutaryl-C 91.0 0.87 3E-05 41.4 8.8 138 54-237 40-192 (295)
60 3d0c_A Dihydrodipicolinate syn 90.8 0.6 2.1E-05 43.3 7.7 161 82-285 13-210 (314)
61 3f4w_A Putative hexulose 6 pho 90.7 0.94 3.2E-05 38.4 8.3 125 39-223 65-194 (211)
62 1z41_A YQJM, probable NADH-dep 90.6 0.19 6.6E-06 46.9 4.2 119 71-239 196-325 (338)
63 3bo9_A Putative nitroalkan dio 90.6 5.6 0.00019 36.7 14.1 133 42-238 41-175 (326)
64 3b8i_A PA4872 oxaloacetate dec 90.4 2.1 7.1E-05 39.8 10.9 120 105-267 101-231 (287)
65 3tsm_A IGPS, indole-3-glycerol 90.2 3.8 0.00013 37.6 12.4 111 107-266 135-247 (272)
66 3lmz_A Putative sugar isomeras 90.2 0.76 2.6E-05 39.8 7.3 101 42-151 31-134 (257)
67 2qul_A D-tagatose 3-epimerase; 90.0 1.5 5.3E-05 38.0 9.2 47 102-148 18-65 (290)
68 2qw5_A Xylose isomerase-like T 90.0 1.5 5.3E-05 39.4 9.5 44 105-148 35-86 (335)
69 4a29_A Engineered retro-aldol 89.8 4.1 0.00014 37.5 12.2 130 103-283 114-250 (258)
70 1i60_A IOLI protein; beta barr 89.7 0.64 2.2E-05 40.0 6.4 139 102-270 15-175 (278)
71 3eb2_A Putative dihydrodipicol 89.5 1.2 4.2E-05 41.0 8.5 142 102-285 26-204 (300)
72 3ktc_A Xylose isomerase; putat 89.5 2.9 9.9E-05 37.8 11.0 71 56-147 7-78 (333)
73 3vav_A 3-methyl-2-oxobutanoate 89.4 0.91 3.1E-05 42.2 7.6 96 108-240 114-209 (275)
74 1rqb_A Transcarboxylase 5S sub 89.3 3.2 0.00011 41.8 12.1 146 50-239 127-276 (539)
75 2czd_A Orotidine 5'-phosphate 89.3 1.8 6.1E-05 37.2 9.0 87 25-123 51-141 (208)
76 2gjl_A Hypothetical protein PA 89.3 2.5 8.7E-05 38.7 10.6 138 42-238 30-171 (328)
77 2cw6_A Hydroxymethylglutaryl-C 89.1 1.3 4.5E-05 40.5 8.4 144 45-237 34-193 (298)
78 3rmj_A 2-isopropylmalate synth 89.0 2.5 8.6E-05 40.3 10.6 141 54-235 101-256 (370)
79 1nvm_A HOA, 4-hydroxy-2-oxoval 89.0 3.9 0.00013 38.1 11.8 92 103-237 95-186 (345)
80 3tva_A Xylose isomerase domain 89.0 0.25 8.4E-06 43.4 3.3 150 102-272 22-187 (290)
81 3tak_A DHDPS, dihydrodipicolin 88.9 1.6 5.5E-05 39.9 8.9 143 102-285 23-201 (291)
82 3nav_A Tryptophan synthase alp 88.9 2.8 9.7E-05 38.4 10.5 108 31-148 27-155 (271)
83 1oy0_A Ketopantoate hydroxymet 88.9 1 3.5E-05 41.9 7.6 154 42-241 45-216 (281)
84 1gte_A Dihydropyrimidine dehyd 88.9 2.5 8.5E-05 45.0 11.4 78 40-124 647-738 (1025)
85 3b4u_A Dihydrodipicolinate syn 88.5 1.2 4E-05 40.9 7.6 79 102-217 25-107 (294)
86 3bg3_A Pyruvate carboxylase, m 88.3 6.8 0.00023 40.7 14.0 148 52-241 209-363 (718)
87 3hgj_A Chromate reductase; TIM 88.2 0.41 1.4E-05 45.0 4.4 138 54-241 166-338 (349)
88 3igs_A N-acetylmannosamine-6-p 87.6 3.3 0.00011 36.8 9.7 119 42-221 93-215 (232)
89 1vhn_A Putative flavin oxidore 87.5 1.3 4.6E-05 40.6 7.4 79 39-125 69-164 (318)
90 3b0p_A TRNA-dihydrouridine syn 87.5 1.6 5.6E-05 40.9 8.1 98 40-142 69-194 (350)
91 1o66_A 3-methyl-2-oxobutanoate 87.2 1.6 5.6E-05 40.5 7.8 95 109-241 104-198 (275)
92 3dx5_A Uncharacterized protein 87.2 0.83 2.8E-05 39.8 5.5 46 102-147 16-65 (286)
93 3kws_A Putative sugar isomeras 87.1 6.6 0.00023 34.2 11.4 105 42-150 39-166 (287)
94 3qze_A DHDPS, dihydrodipicolin 87.1 2.6 8.9E-05 39.1 9.1 144 101-285 44-223 (314)
95 1hjs_A Beta-1,4-galactanase; 4 87.0 2.4 8.3E-05 39.4 8.9 63 79-153 15-83 (332)
96 3u0h_A Xylose isomerase domain 87.0 1 3.5E-05 38.8 6.0 47 102-148 17-65 (281)
97 3ble_A Citramalate synthase fr 87.0 1.8 6.3E-05 40.5 8.1 140 46-236 50-205 (337)
98 1m3u_A 3-methyl-2-oxobutanoate 86.9 1.3 4.5E-05 40.8 7.0 96 109-241 103-198 (264)
99 2r91_A 2-keto-3-deoxy-(6-phosp 86.9 2.5 8.4E-05 38.5 8.7 77 102-217 20-99 (286)
100 3flu_A DHDPS, dihydrodipicolin 86.8 3.3 0.00011 37.9 9.6 143 102-285 29-207 (297)
101 3rcm_A TATD family hydrolase; 86.6 11 0.00037 34.4 12.9 170 22-250 27-211 (287)
102 1f6k_A N-acetylneuraminate lya 86.6 1.4 4.7E-05 40.4 6.8 141 102-285 25-203 (293)
103 3l21_A DHDPS, dihydrodipicolin 86.5 2.5 8.6E-05 38.9 8.6 98 82-216 17-118 (304)
104 3daq_A DHDPS, dihydrodipicolin 86.4 1.6 5.5E-05 39.9 7.2 144 101-285 23-203 (292)
105 2ehh_A DHDPS, dihydrodipicolin 86.4 1.6 5.6E-05 39.8 7.3 143 102-285 22-201 (294)
106 1xky_A Dihydrodipicolinate syn 86.3 3.6 0.00012 37.8 9.6 142 102-285 34-212 (301)
107 2wkj_A N-acetylneuraminate lya 86.1 1.6 5.4E-05 40.3 7.0 138 102-282 33-208 (303)
108 1ydo_A HMG-COA lyase; TIM-barr 86.0 2.4 8.2E-05 39.3 8.3 148 43-238 33-195 (307)
109 3ih1_A Methylisocitrate lyase; 86.0 2.4 8.3E-05 39.7 8.3 96 103-240 106-212 (305)
110 3s5o_A 4-hydroxy-2-oxoglutarat 86.0 1.5 5.2E-05 40.4 6.9 141 102-283 36-215 (307)
111 2e6f_A Dihydroorotate dehydrog 86.0 3.5 0.00012 37.4 9.2 62 56-124 125-198 (314)
112 2rfg_A Dihydrodipicolinate syn 85.9 1.8 6E-05 39.8 7.2 142 102-285 22-200 (297)
113 2zds_A Putative DNA-binding pr 85.9 0.95 3.2E-05 40.4 5.3 47 102-148 16-69 (340)
114 1qop_A Tryptophan synthase alp 85.7 19 0.00065 32.1 14.0 102 40-148 30-152 (268)
115 3b0p_A TRNA-dihydrouridine syn 85.7 2.2 7.4E-05 40.1 7.9 105 100-238 69-195 (350)
116 3a5f_A Dihydrodipicolinate syn 85.7 2.1 7E-05 39.1 7.6 142 102-285 23-201 (291)
117 1tv5_A Dhodehase, dihydroorota 85.7 8.3 0.00028 37.8 12.3 24 102-125 312-335 (443)
118 3ipw_A Hydrolase TATD family p 85.5 18 0.00063 33.7 14.2 169 22-251 62-250 (325)
119 1o5k_A DHDPS, dihydrodipicolin 85.4 3.3 0.00011 38.2 8.9 144 101-285 33-216 (306)
120 2v9d_A YAGE; dihydrodipicolini 85.4 3.2 0.00011 39.1 8.9 141 102-283 53-233 (343)
121 2nuw_A 2-keto-3-deoxygluconate 85.2 2.4 8.2E-05 38.7 7.8 137 102-281 21-167 (288)
122 3ajx_A 3-hexulose-6-phosphate 85.1 2.1 7.1E-05 36.2 6.8 94 39-145 11-105 (207)
123 2yxg_A DHDPS, dihydrodipicolin 85.1 2 6.8E-05 39.2 7.2 141 102-285 22-199 (289)
124 3q58_A N-acetylmannosamine-6-p 85.1 4.2 0.00014 36.0 9.1 119 42-221 93-215 (229)
125 3ewb_X 2-isopropylmalate synth 85.0 3.2 0.00011 38.1 8.5 143 42-236 31-186 (293)
126 3jr2_A Hexulose-6-phosphate sy 84.9 4.9 0.00017 34.6 9.3 92 39-145 17-111 (218)
127 3tva_A Xylose isomerase domain 84.7 1 3.4E-05 39.5 4.8 108 42-151 25-160 (290)
128 3i65_A Dihydroorotate dehydrog 84.6 6.6 0.00023 38.3 10.9 74 43-125 198-307 (415)
129 3cny_A Inositol catabolism pro 84.6 0.82 2.8E-05 40.0 4.2 43 102-149 32-74 (301)
130 1w3i_A EDA, 2-keto-3-deoxy glu 84.5 2.6 8.7E-05 38.6 7.6 77 102-217 21-100 (293)
131 2ojp_A DHDPS, dihydrodipicolin 84.5 1.7 5.9E-05 39.7 6.5 142 102-285 23-201 (292)
132 1xg4_A Probable methylisocitra 84.5 2.8 9.5E-05 39.0 7.9 93 107-239 100-203 (295)
133 3e96_A Dihydrodipicolinate syn 84.4 2.3 8E-05 39.3 7.4 160 82-282 13-207 (316)
134 2vtf_A Endo-beta-N-acetylgluco 84.4 2.7 9.3E-05 43.1 8.4 90 50-143 88-201 (626)
135 3m5v_A DHDPS, dihydrodipicolin 84.2 6.9 0.00024 35.8 10.4 146 101-285 28-208 (301)
136 3qfe_A Putative dihydrodipicol 84.1 4.6 0.00016 37.5 9.3 111 102-249 33-149 (318)
137 3qja_A IGPS, indole-3-glycerol 83.7 3.4 0.00012 37.7 8.0 35 199-236 226-260 (272)
138 3n9r_A Fructose-bisphosphate a 83.7 13 0.00044 34.9 12.2 195 40-273 27-241 (307)
139 1wa3_A 2-keto-3-deoxy-6-phosph 83.6 11 0.00039 31.5 10.8 86 39-148 20-109 (205)
140 2r8w_A AGR_C_1641P; APC7498, d 83.4 2 6.9E-05 40.2 6.6 142 102-285 56-238 (332)
141 1jub_A Dihydroorotate dehydrog 83.4 2.7 9.3E-05 38.0 7.3 79 102-217 107-194 (311)
142 3t7v_A Methylornithine synthas 83.2 13 0.00043 34.0 11.8 129 40-215 93-237 (350)
143 4e38_A Keto-hydroxyglutarate-a 83.2 2.3 7.9E-05 38.3 6.6 162 62-282 14-195 (232)
144 3m47_A Orotidine 5'-phosphate 83.1 0.77 2.6E-05 40.8 3.4 93 39-143 23-117 (228)
145 2h6r_A Triosephosphate isomera 83.0 5.7 0.0002 34.7 9.0 46 107-152 75-120 (219)
146 1q6o_A Humps, 3-keto-L-gulonat 82.8 2.2 7.6E-05 36.7 6.2 75 39-117 14-109 (216)
147 4e38_A Keto-hydroxyglutarate-a 82.7 1.1 3.7E-05 40.5 4.2 21 201-222 188-208 (232)
148 2ztj_A Homocitrate synthase; ( 82.7 14 0.00047 35.1 12.1 146 43-232 80-238 (382)
149 3ru6_A Orotidine 5'-phosphate 82.6 4.8 0.00016 37.7 8.7 134 66-248 112-259 (303)
150 3fkr_A L-2-keto-3-deoxyarabona 82.6 2.8 9.5E-05 38.7 7.1 147 102-285 30-214 (309)
151 3c8f_A Pyruvate formate-lyase 82.2 5.3 0.00018 33.5 8.2 102 40-152 52-169 (245)
152 2hk0_A D-psicose 3-epimerase; 82.0 1.3 4.3E-05 39.5 4.4 46 102-148 38-84 (309)
153 3cpr_A Dihydrodipicolinate syn 81.9 3.4 0.00012 38.0 7.4 160 82-285 18-214 (304)
154 3h5d_A DHDPS, dihydrodipicolin 81.8 8.5 0.00029 35.6 10.0 144 101-285 28-207 (311)
155 1wa3_A 2-keto-3-deoxy-6-phosph 81.6 7.7 0.00026 32.6 9.0 75 39-141 72-146 (205)
156 4dpp_A DHDPS 2, dihydrodipicol 81.6 3.3 0.00011 39.6 7.4 101 79-216 58-162 (360)
157 1y0e_A Putative N-acetylmannos 81.5 5.7 0.0002 33.8 8.3 43 104-146 78-122 (223)
158 1yxy_A Putative N-acetylmannos 81.4 25 0.00084 30.1 13.0 144 75-264 10-156 (234)
159 2hjp_A Phosphonopyruvate hydro 81.4 5.6 0.00019 36.9 8.6 98 104-239 93-203 (290)
160 2ztj_A Homocitrate synthase; ( 81.1 21 0.00071 33.9 12.8 140 43-236 30-180 (382)
161 3ldv_A Orotidine 5'-phosphate 81.1 3.3 0.00011 37.8 6.8 88 103-236 164-252 (255)
162 3ctl_A D-allulose-6-phosphate 81.0 3.3 0.00011 36.8 6.8 45 42-93 72-120 (231)
163 3gr7_A NADPH dehydrogenase; fl 80.8 18 0.00062 33.7 12.1 23 191-216 228-250 (340)
164 1xim_A D-xylose isomerase; iso 80.8 4.7 0.00016 37.8 8.0 50 99-148 31-87 (393)
165 1xwy_A DNAse TATD, deoxyribonu 80.6 26 0.00088 30.1 12.3 169 22-250 29-209 (264)
166 1fob_A Beta-1,4-galactanase; B 80.4 5.6 0.00019 36.9 8.3 63 79-153 15-83 (334)
167 1f6y_A 5-methyltetrahydrofolat 80.4 10 0.00035 34.3 9.9 101 42-145 30-153 (262)
168 3l23_A Sugar phosphate isomera 80.3 1.4 4.9E-05 39.5 4.2 47 102-148 30-77 (303)
169 3q94_A Fructose-bisphosphate a 79.6 28 0.00096 32.2 12.8 144 57-240 50-207 (288)
170 3t7v_A Methylornithine synthas 79.5 13 0.00046 33.8 10.5 96 41-145 126-232 (350)
171 3dz1_A Dihydrodipicolinate syn 79.1 7.9 0.00027 35.7 8.9 76 102-215 30-109 (313)
172 3cqj_A L-ribulose-5-phosphate 79.1 7.1 0.00024 34.1 8.2 109 42-150 31-167 (295)
173 2p0o_A Hypothetical protein DU 79.0 14 0.00048 35.6 10.8 152 83-280 6-199 (372)
174 1ep3_A Dihydroorotate dehydrog 78.9 4.4 0.00015 36.2 6.9 41 102-142 112-162 (311)
175 3eoo_A Methylisocitrate lyase; 78.5 5.5 0.00019 37.1 7.6 117 77-239 77-207 (298)
176 2qf7_A Pyruvate carboxylase pr 78.5 28 0.00095 38.0 14.1 146 53-240 658-809 (1165)
177 3vni_A Xylose isomerase domain 77.9 9.3 0.00032 33.2 8.6 110 42-151 18-153 (294)
178 1gvf_A Tagatose-bisphosphate a 77.7 44 0.0015 30.9 13.6 147 56-240 46-203 (286)
179 1y0e_A Putative N-acetylmannos 77.7 31 0.0011 29.1 12.0 85 41-141 79-172 (223)
180 1geq_A Tryptophan synthase alp 77.4 16 0.00054 31.5 9.9 69 73-148 69-138 (248)
181 3zwt_A Dihydroorotate dehydrog 77.3 10 0.00035 36.0 9.3 82 102-217 162-256 (367)
182 2qjg_A Putative aldolase MJ040 77.3 6.3 0.00022 34.7 7.4 133 40-223 102-244 (273)
183 3gg7_A Uncharacterized metallo 77.2 20 0.0007 32.1 10.8 165 22-251 24-199 (254)
184 3kru_A NADH:flavin oxidoreduct 77.1 1.5 5.1E-05 41.4 3.4 71 68-141 192-274 (343)
185 3bg3_A Pyruvate carboxylase, m 77.1 13 0.00044 38.7 10.6 100 103-237 199-298 (718)
186 4fo4_A Inosine 5'-monophosphat 76.9 15 0.00053 34.9 10.4 63 67-142 79-146 (366)
187 1ur4_A Galactanase; hydrolase, 76.8 15 0.00052 35.3 10.4 49 104-154 51-113 (399)
188 2hmc_A AGR_L_411P, dihydrodipi 76.7 8.2 0.00028 36.3 8.4 108 102-248 48-160 (344)
189 3qxb_A Putative xylose isomera 76.7 4.5 0.00015 36.0 6.3 47 102-148 36-88 (316)
190 2a5h_A L-lysine 2,3-aminomutas 76.5 32 0.0011 32.7 12.6 109 39-152 146-261 (416)
191 1z41_A YQJM, probable NADH-dep 76.3 23 0.00078 32.7 11.2 25 191-218 228-252 (338)
192 3fa4_A 2,3-dimethylmalate lyas 76.3 2.3 8E-05 39.8 4.4 132 103-274 97-243 (302)
193 2ze3_A DFA0005; organic waste 76.2 28 0.00095 31.9 11.6 98 107-239 98-204 (275)
194 1zzm_A Putative deoxyribonucle 76.2 36 0.0012 29.0 13.1 168 22-250 29-209 (259)
195 1s2w_A Phosphoenolpyruvate pho 76.2 11 0.00036 35.1 8.8 95 107-239 100-207 (295)
196 2isw_A Putative fructose-1,6-b 76.0 22 0.00074 33.6 11.0 138 105-273 89-241 (323)
197 1ujp_A Tryptophan synthase alp 75.9 18 0.00061 32.8 10.1 103 39-148 28-149 (271)
198 1a0c_A Xylose isomerase; ketol 75.8 14 0.00048 35.8 10.0 50 95-146 76-136 (438)
199 2qiw_A PEP phosphonomutase; st 75.8 12 0.00043 33.8 9.0 97 112-244 104-210 (255)
200 2z1k_A (NEO)pullulanase; hydro 75.7 2.8 9.6E-05 39.9 4.9 46 107-152 56-119 (475)
201 3l5l_A Xenobiotic reductase A; 75.7 16 0.00054 34.3 10.0 25 191-218 245-269 (363)
202 3r2g_A Inosine 5'-monophosphat 75.6 8.6 0.00029 36.7 8.2 37 102-142 100-138 (361)
203 3tr2_A Orotidine 5'-phosphate 75.5 12 0.00042 33.4 8.8 161 25-237 59-235 (239)
204 4gqr_A Pancreatic alpha-amylas 75.5 2.6 8.8E-05 39.3 4.5 49 104-152 26-99 (496)
205 1k77_A EC1530, hypothetical pr 75.5 1.9 6.5E-05 36.9 3.3 43 102-148 16-58 (260)
206 1tv5_A Dhodehase, dihydroorota 75.4 13 0.00043 36.4 9.5 41 101-141 194-243 (443)
207 3guw_A Uncharacterized protein 75.4 14 0.00046 33.2 9.1 176 22-251 21-210 (261)
208 3i65_A Dihydroorotate dehydrog 75.3 13 0.00045 36.2 9.6 84 102-219 197-307 (415)
209 3gdb_A Endo-D, putative unchar 75.2 3.2 0.00011 44.5 5.5 66 49-121 237-323 (937)
210 3vk5_A MOEO5; TIM barrel, tran 75.1 5.5 0.00019 37.2 6.5 161 23-239 38-276 (286)
211 3sz8_A 2-dehydro-3-deoxyphosph 75.0 5.4 0.00018 37.1 6.5 41 198-238 224-269 (285)
212 1ka9_F Imidazole glycerol phos 74.8 15 0.0005 31.7 9.0 95 102-244 32-127 (252)
213 3ivs_A Homocitrate synthase, m 74.6 10 0.00034 37.1 8.5 140 42-238 65-218 (423)
214 3lye_A Oxaloacetate acetyl hyd 74.3 3.7 0.00013 38.5 5.2 129 103-271 105-248 (307)
215 1jvn_A Glutamine, bifunctional 73.7 6.7 0.00023 39.1 7.2 52 198-249 350-408 (555)
216 2hk0_A D-psicose 3-epimerase; 73.5 11 0.00039 33.2 8.1 108 42-150 38-171 (309)
217 3hgj_A Chromate reductase; TIM 73.5 33 0.0011 31.9 11.6 23 191-216 238-260 (349)
218 1wv2_A Thiazole moeity, thiazo 73.3 35 0.0012 31.5 11.4 177 39-270 31-221 (265)
219 3ayv_A Putative uncharacterize 73.3 20 0.00069 30.4 9.4 140 102-270 11-163 (254)
220 4aie_A Glucan 1,6-alpha-glucos 73.3 3.7 0.00013 39.2 5.1 46 107-152 38-102 (549)
221 2nwr_A 2-dehydro-3-deoxyphosph 73.2 8.2 0.00028 35.4 7.2 41 198-238 205-250 (267)
222 1h5y_A HISF; histidine biosynt 73.2 10 0.00035 32.1 7.4 41 101-141 33-74 (253)
223 1f76_A Dihydroorotate dehydrog 73.2 21 0.00072 32.6 10.0 21 198-218 228-248 (336)
224 3aam_A Endonuclease IV, endoiv 73.1 6.1 0.00021 34.1 6.0 106 42-150 15-140 (270)
225 2qr6_A IMP dehydrogenase/GMP r 73.1 17 0.00057 34.2 9.5 20 198-218 222-241 (393)
226 1j0h_A Neopullulanase; beta-al 73.1 3.4 0.00012 41.0 4.9 46 107-152 182-245 (588)
227 3dxi_A Putative aldolase; TIM 72.9 36 0.0012 31.7 11.6 148 41-237 88-240 (320)
228 2dh2_A 4F2 cell-surface antige 72.8 3.5 0.00012 39.3 4.8 134 104-265 39-191 (424)
229 3tfx_A Orotidine 5'-phosphate 72.7 6.9 0.00024 35.7 6.5 89 104-238 147-236 (259)
230 1bxb_A Xylose isomerase; xylos 72.5 4.2 0.00014 38.0 5.2 47 102-148 34-87 (387)
231 2yyu_A Orotidine 5'-phosphate 72.4 2.7 9.4E-05 37.3 3.7 95 39-145 15-113 (246)
232 1yxy_A Putative N-acetylmannos 72.4 8.3 0.00028 33.1 6.7 39 104-142 91-130 (234)
233 3ngf_A AP endonuclease, family 72.3 7.6 0.00026 33.6 6.5 100 42-149 24-150 (269)
234 2gou_A Oxidoreductase, FMN-bin 72.1 37 0.0013 31.9 11.6 24 191-217 249-272 (365)
235 1jcn_A Inosine monophosphate d 72.1 37 0.0013 33.0 12.0 82 42-141 259-355 (514)
236 2yb1_A Amidohydrolase; HET: AM 71.9 3.6 0.00012 37.3 4.4 69 71-146 172-243 (292)
237 2w91_A Endo-beta-N-acetylgluco 71.9 4.5 0.00015 41.7 5.6 86 51-142 88-193 (653)
238 2j6v_A UV endonuclease, UVDE; 71.6 17 0.00058 33.3 8.9 135 97-261 57-215 (301)
239 1dbt_A Orotidine 5'-phosphate 71.4 2.1 7.2E-05 37.8 2.7 92 39-142 14-106 (239)
240 3qc0_A Sugar isomerase; TIM ba 71.3 6.6 0.00023 33.5 5.8 105 42-149 19-142 (275)
241 2zds_A Putative DNA-binding pr 71.3 34 0.0012 30.1 10.7 107 42-150 19-180 (340)
242 3txv_A Probable tagatose 6-pho 71.3 34 0.0012 33.8 11.4 122 66-220 2-136 (450)
243 3dhu_A Alpha-amylase; structur 71.2 4.6 0.00016 38.2 5.2 46 107-152 36-106 (449)
244 1g94_A Alpha-amylase; beta-alp 71.0 4.9 0.00017 38.3 5.3 51 102-152 16-87 (448)
245 3tsm_A IGPS, indole-3-glycerol 71.0 21 0.00073 32.6 9.4 25 198-223 232-256 (272)
246 1zlp_A PSR132, petal death pro 70.9 6.1 0.00021 37.2 5.8 96 105-240 120-226 (318)
247 2wc7_A Alpha amylase, catalyti 70.9 4.3 0.00015 39.0 4.9 46 107-152 62-125 (488)
248 4dbe_A Orotidine 5'-phosphate 70.9 11 0.00036 33.4 7.1 135 25-224 52-195 (222)
249 1ht6_A AMY1, alpha-amylase iso 70.9 4.5 0.00015 38.1 5.0 46 107-152 27-91 (405)
250 3d3a_A Beta-galactosidase; pro 70.8 4.2 0.00015 41.4 5.1 52 100-151 36-97 (612)
251 3m6y_A 4-hydroxy-2-oxoglutarat 70.8 24 0.00082 32.7 9.5 17 72-88 170-189 (275)
252 1eep_A Inosine 5'-monophosphat 70.7 13 0.00045 35.1 8.2 38 103-142 154-191 (404)
253 1gcy_A Glucan 1,4-alpha-maltot 70.6 7 0.00024 38.2 6.5 47 106-152 42-115 (527)
254 4aio_A Limit dextrinase; hydro 70.6 3.2 0.00011 42.3 4.2 23 130-152 379-401 (884)
255 3aal_A Probable endonuclease 4 70.3 12 0.00042 32.9 7.5 101 42-142 19-137 (303)
256 1lwj_A 4-alpha-glucanotransfer 70.2 6 0.00021 37.4 5.7 46 107-152 29-92 (441)
257 2qul_A D-tagatose 3-epimerase; 70.1 5.4 0.00019 34.4 5.0 108 43-150 19-153 (290)
258 3lab_A Putative KDPG (2-keto-3 69.7 7.4 0.00025 34.8 5.9 35 102-141 26-60 (217)
259 3tdn_A FLR symmetric alpha-bet 69.6 6.2 0.00021 34.4 5.3 95 102-244 36-131 (247)
260 1thf_D HISF protein; thermophI 69.5 22 0.00077 30.5 8.9 94 102-243 31-125 (253)
261 1xla_A D-xylose isomerase; iso 69.2 3.7 0.00013 38.5 4.0 47 102-148 34-87 (394)
262 1jcn_A Inosine monophosphate d 68.9 15 0.00052 35.8 8.4 39 102-142 255-293 (514)
263 3bh4_A Alpha-amylase; calcium, 68.9 7.1 0.00024 37.4 6.0 48 104-151 24-100 (483)
264 1dos_A Aldolase class II; lyas 68.8 29 0.00098 33.2 10.1 168 39-236 38-246 (358)
265 1hvx_A Alpha-amylase; hydrolas 68.5 7.4 0.00025 37.8 6.1 47 105-151 28-103 (515)
266 3eww_A Ompdecase, orotidine-5' 68.4 6.5 0.00022 35.9 5.3 49 39-87 42-90 (260)
267 1ud2_A Amylase, alpha-amylase; 68.4 7.3 0.00025 37.2 6.0 48 105-152 27-103 (480)
268 1wzl_A Alpha-amylase II; pullu 68.4 4.7 0.00016 40.0 4.7 46 107-152 179-242 (585)
269 1wpc_A Glucan 1,4-alpha-maltoh 68.4 7.3 0.00025 37.3 6.0 47 105-151 29-104 (485)
270 3m0z_A Putative aldolase; MCSG 68.2 27 0.00092 32.0 9.2 95 103-237 147-243 (249)
271 2e6f_A Dihydroorotate dehydrog 68.1 6.9 0.00024 35.4 5.4 78 102-217 107-197 (314)
272 2fty_A Dihydropyrimidinase; al 67.8 44 0.0015 32.8 11.6 104 42-152 152-280 (559)
273 3l23_A Sugar phosphate isomera 67.7 25 0.00085 31.2 9.0 102 43-149 31-165 (303)
274 1ea9_C Cyclomaltodextrinase; h 67.6 5.3 0.00018 39.6 4.9 46 107-152 178-241 (583)
275 2ekc_A AQ_1548, tryptophan syn 67.5 22 0.00074 31.7 8.6 17 199-216 219-235 (262)
276 1p1x_A Deoxyribose-phosphate a 67.4 23 0.00078 32.3 8.7 108 41-153 89-202 (260)
277 2guy_A Alpha-amylase A; (beta- 67.2 6.5 0.00022 37.5 5.3 47 106-152 48-120 (478)
278 3pm6_A Putative fructose-bisph 67.2 27 0.00091 32.8 9.3 146 57-239 56-219 (306)
279 3o1n_A 3-dehydroquinate dehydr 67.1 26 0.0009 31.9 9.1 104 69-214 82-195 (276)
280 3hbl_A Pyruvate carboxylase; T 66.9 42 0.0014 36.5 12.1 163 32-239 619-791 (1150)
281 1vc4_A Indole-3-glycerol phosp 66.7 9.9 0.00034 34.1 6.1 82 107-238 121-202 (254)
282 2aaa_A Alpha-amylase; glycosid 66.6 6.3 0.00022 37.7 5.1 47 107-153 49-121 (484)
283 1muw_A Xylose isomerase; atomi 66.2 4.6 0.00016 37.7 3.9 47 102-148 34-87 (386)
284 3rmj_A 2-isopropylmalate synth 66.2 13 0.00046 35.3 7.2 94 102-236 88-193 (370)
285 3ks6_A Glycerophosphoryl diest 66.2 12 0.00041 32.9 6.5 99 42-148 87-209 (250)
286 3vup_A Beta-1,4-mannanase; TIM 66.1 7 0.00024 33.4 4.8 51 102-152 43-112 (351)
287 3ff4_A Uncharacterized protein 66.1 4.3 0.00015 32.8 3.2 42 100-147 68-109 (122)
288 3iix_A Biotin synthetase, puta 65.9 10 0.00035 34.2 6.1 137 67-242 84-224 (348)
289 2qf7_A Pyruvate carboxylase pr 65.8 39 0.0013 36.9 11.5 102 102-238 646-747 (1165)
290 2q02_A Putative cytoplasmic pr 65.8 46 0.0016 28.2 10.0 104 43-150 21-140 (272)
291 2e8y_A AMYX protein, pullulana 65.4 4.8 0.00016 41.2 4.2 48 105-152 255-338 (718)
292 3g3d_A UMP synthase, uridine 5 65.0 8 0.00027 36.4 5.3 49 39-87 94-142 (312)
293 3m6y_A 4-hydroxy-2-oxoglutarat 64.7 24 0.00081 32.7 8.2 45 102-150 195-243 (275)
294 1vzw_A Phosphoribosyl isomeras 64.7 17 0.00059 31.3 7.1 39 199-244 88-126 (244)
295 2v82_A 2-dehydro-3-deoxy-6-pho 64.5 50 0.0017 27.6 9.9 72 54-148 33-106 (212)
296 3dx5_A Uncharacterized protein 64.4 16 0.00056 31.4 6.9 103 43-150 17-143 (286)
297 3khj_A Inosine-5-monophosphate 64.1 22 0.00075 33.6 8.2 65 67-142 78-143 (361)
298 1eix_A Orotidine 5'-monophosph 63.9 1.8 6E-05 38.6 0.6 95 38-143 24-118 (245)
299 1mzh_A Deoxyribose-phosphate a 63.8 10 0.00035 33.2 5.5 146 39-239 18-173 (225)
300 1x7f_A Outer surface protein; 63.7 5.5 0.00019 38.6 4.1 147 79-272 26-208 (385)
301 1zja_A Trehalulose synthase; s 63.5 7.6 0.00026 38.1 5.1 48 105-152 36-102 (557)
302 2r14_A Morphinone reductase; H 63.5 27 0.00093 33.0 8.8 24 191-217 254-277 (377)
303 3aie_A Glucosyltransferase-SI; 63.5 7.6 0.00026 41.1 5.4 50 103-152 635-715 (844)
304 2dsk_A Chitinase; catalytic do 63.4 7.8 0.00027 36.3 4.9 75 67-142 58-138 (311)
305 4aef_A Neopullulanase (alpha-a 63.4 7.3 0.00025 39.0 5.0 47 106-152 244-308 (645)
306 3m0z_A Putative aldolase; MCSG 63.2 28 0.00097 31.8 8.3 99 39-150 101-220 (249)
307 3hbl_A Pyruvate carboxylase; T 63.1 55 0.0019 35.6 12.1 102 103-238 629-730 (1150)
308 2whl_A Beta-mannanase, baman5; 63.1 11 0.00036 33.5 5.6 50 103-152 33-86 (294)
309 3gbc_A Pyrazinamidase/nicotina 62.8 5.2 0.00018 34.0 3.3 65 76-147 117-183 (186)
310 3gdm_A Orotidine 5'-phosphate 62.7 8.7 0.0003 35.2 5.0 49 39-87 40-89 (267)
311 2qjg_A Putative aldolase MJ040 62.7 26 0.0009 30.6 8.1 94 105-239 103-202 (273)
312 2yx0_A Radical SAM enzyme; pre 62.6 19 0.00064 32.8 7.3 85 54-152 142-245 (342)
313 4avf_A Inosine-5'-monophosphat 62.6 59 0.002 31.7 11.2 55 54-121 242-298 (490)
314 2xio_A Putative deoxyribonucle 62.3 85 0.0029 27.9 13.8 167 22-250 37-221 (301)
315 3l5a_A NADH/flavin oxidoreduct 62.2 2.2 7.5E-05 41.4 0.9 24 102-125 265-289 (419)
316 3ajx_A 3-hexulose-6-phosphate 62.2 36 0.0012 28.3 8.5 33 200-235 171-203 (207)
317 3ffs_A Inosine-5-monophosphate 62.1 22 0.00074 34.4 7.9 37 104-142 146-182 (400)
318 3bdk_A D-mannonate dehydratase 62.0 9.1 0.00031 36.7 5.2 43 105-147 34-81 (386)
319 2bhu_A Maltooligosyltrehalose 61.7 8.8 0.0003 38.5 5.3 133 105-249 148-310 (602)
320 1i60_A IOLI protein; beta barr 61.6 19 0.00064 30.6 6.7 23 102-124 85-107 (278)
321 1vyr_A Pentaerythritol tetrani 61.6 72 0.0025 29.9 11.3 45 191-239 250-294 (364)
322 4aee_A Alpha amylase, catalyti 61.6 8.2 0.00028 39.2 5.1 46 107-152 271-334 (696)
323 3civ_A Endo-beta-1,4-mannanase 61.5 15 0.0005 34.5 6.5 50 104-153 56-120 (343)
324 3eeg_A 2-isopropylmalate synth 61.4 34 0.0011 31.8 8.9 94 103-237 83-188 (325)
325 1q6o_A Humps, 3-keto-L-gulonat 61.2 10 0.00035 32.5 5.0 22 202-224 178-199 (216)
326 1uuq_A Mannosyl-oligosaccharid 61.2 12 0.00041 35.4 5.9 50 101-151 62-132 (440)
327 3cny_A Inositol catabolism pro 61.1 51 0.0017 28.3 9.6 101 42-150 35-161 (301)
328 1vyr_A Pentaerythritol tetrani 61.1 12 0.0004 35.3 5.7 120 71-241 213-343 (364)
329 1ypf_A GMP reductase; GUAC, pu 61.0 99 0.0034 28.4 12.0 63 69-142 80-146 (336)
330 1ps9_A 2,4-dienoyl-COA reducta 60.8 3.7 0.00013 41.1 2.4 39 103-141 230-277 (671)
331 1im5_A 180AA long hypothetical 60.5 6.1 0.00021 32.9 3.3 65 77-148 113-179 (180)
332 1ua7_A Alpha-amylase; beta-alp 60.5 8.1 0.00028 36.4 4.5 59 85-152 10-97 (422)
333 2zic_A Dextran glucosidase; TI 60.4 8.6 0.00029 37.7 4.8 47 106-152 36-101 (543)
334 3nco_A Endoglucanase fncel5A; 60.4 14 0.00047 33.1 5.9 48 104-151 44-103 (320)
335 1m53_A Isomaltulose synthase; 60.3 9.3 0.00032 37.7 5.1 47 106-152 50-115 (570)
336 2agk_A 1-(5-phosphoribosyl)-5- 60.0 8 0.00028 34.8 4.2 46 201-248 90-135 (260)
337 1zco_A 2-dehydro-3-deoxyphosph 59.8 42 0.0014 30.3 9.0 108 24-141 129-257 (262)
338 3o0f_A Putative metal-dependen 59.7 12 0.00041 34.7 5.5 68 71-145 184-255 (301)
339 3sfw_A Dihydropyrimidinase; hy 59.6 57 0.002 30.5 10.3 96 52-152 144-265 (461)
340 1mxg_A Alpha amylase; hyperthe 59.6 12 0.00042 35.5 5.7 46 107-152 34-109 (435)
341 1m7x_A 1,4-alpha-glucan branch 59.6 13 0.00045 37.1 6.1 49 104-152 159-227 (617)
342 1gkr_A Hydantoinase, non-ATP d 59.5 1E+02 0.0036 28.0 11.9 92 54-150 143-263 (458)
343 4gj1_A 1-(5-phosphoribosyl)-5- 59.4 12 0.0004 33.2 5.2 41 198-244 87-127 (243)
344 3obe_A Sugar phosphate isomera 59.4 51 0.0017 29.3 9.5 104 42-149 37-169 (305)
345 3can_A Pyruvate-formate lyase- 59.3 9.7 0.00033 31.2 4.3 95 52-147 53-179 (182)
346 2pcq_A Putative dihydrodipicol 59.3 15 0.00053 33.2 6.0 136 102-283 20-189 (283)
347 1qop_A Tryptophan synthase alp 59.2 32 0.0011 30.6 8.1 24 198-222 217-240 (268)
348 1vrd_A Inosine-5'-monophosphat 59.1 38 0.0013 32.7 9.1 39 102-142 237-275 (494)
349 3ldv_A Orotidine 5'-phosphate 58.8 6.4 0.00022 35.8 3.4 91 39-141 38-129 (255)
350 2y88_A Phosphoribosyl isomeras 58.6 24 0.00083 30.1 6.9 39 199-244 87-125 (244)
351 3tqv_A Nicotinate-nucleotide p 58.6 25 0.00085 32.7 7.4 41 198-248 208-248 (287)
352 1h5y_A HISF; histidine biosynt 58.5 37 0.0013 28.5 8.0 24 199-223 211-234 (253)
353 1qtw_A Endonuclease IV; DNA re 58.4 83 0.0029 26.7 10.4 59 68-126 45-114 (285)
354 3edf_A FSPCMD, cyclomaltodextr 58.3 12 0.0004 37.3 5.4 48 105-152 152-221 (601)
355 1icp_A OPR1, 12-oxophytodienoa 58.2 24 0.00082 33.4 7.4 24 191-217 255-278 (376)
356 1geq_A Tryptophan synthase alp 58.1 89 0.003 26.7 10.6 22 199-221 204-225 (248)
357 3qw3_A Orotidine-5-phosphate d 57.8 9 0.00031 34.7 4.2 91 26-122 16-112 (255)
358 3c8f_A Pyruvate formate-lyase 57.6 6 0.00021 33.1 2.8 105 33-144 78-192 (245)
359 3qvq_A Phosphodiesterase OLEI0 57.6 24 0.00082 30.9 6.8 97 42-148 99-215 (252)
360 2h6r_A Triosephosphate isomera 57.4 45 0.0015 28.9 8.5 71 69-153 97-180 (219)
361 1w0m_A TIM, triosephosphate is 57.3 14 0.00048 33.0 5.3 46 107-152 78-123 (226)
362 3nvt_A 3-deoxy-D-arabino-heptu 57.2 33 0.0011 32.9 8.2 40 199-238 330-374 (385)
363 1vs1_A 3-deoxy-7-phosphoheptul 57.1 40 0.0014 30.8 8.5 138 51-238 119-270 (276)
364 1rd5_A Tryptophan synthase alp 57.1 44 0.0015 29.3 8.5 20 198-217 213-232 (262)
365 1rpx_A Protein (ribulose-phosp 57.0 18 0.00062 30.9 5.8 39 102-142 24-66 (230)
366 4axn_A Chitinase C1; hydrolase 57.0 12 0.00042 34.1 5.0 52 69-121 82-139 (328)
367 2fli_A Ribulose-phosphate 3-ep 57.0 21 0.00072 30.0 6.2 42 101-142 16-59 (220)
368 3dc8_A Dihydropyrimidinase; TI 56.9 54 0.0018 31.5 9.8 95 54-153 143-263 (490)
369 1qnr_A Endo-1,4-B-D-mannanase; 56.9 10 0.00035 33.8 4.4 52 101-152 36-112 (344)
370 3gk0_A PNP synthase, pyridoxin 56.8 7.6 0.00026 36.2 3.5 51 65-125 137-187 (278)
371 1jae_A Alpha-amylase; glycosid 56.8 6.6 0.00023 37.7 3.2 51 102-152 24-97 (471)
372 1vhn_A Putative flavin oxidore 56.7 29 0.001 31.6 7.5 110 100-248 70-215 (318)
373 2gou_A Oxidoreductase, FMN-bin 56.6 14 0.00047 34.9 5.4 90 103-241 252-342 (365)
374 3kru_A NADH:flavin oxidoreduct 56.6 39 0.0013 31.6 8.4 20 191-214 229-248 (343)
375 3a24_A Alpha-galactosidase; gl 56.5 11 0.00038 38.7 5.1 45 101-145 309-362 (641)
376 2r8c_A Putative amidohydrolase 56.5 84 0.0029 28.6 10.6 103 24-150 100-277 (426)
377 1yad_A Regulatory protein TENI 56.2 35 0.0012 28.9 7.5 70 40-124 29-98 (221)
378 1uok_A Oligo-1,6-glucosidase; 56.0 12 0.0004 36.8 4.9 46 107-152 37-101 (558)
379 3czg_A Sucrose hydrolase; (alp 56.0 15 0.00051 37.1 5.8 50 103-152 108-178 (644)
380 1gjw_A Maltodextrin glycosyltr 55.9 12 0.00042 37.4 5.2 49 103-151 122-203 (637)
381 1qho_A Alpha-amylase; glycosid 55.9 12 0.00042 37.7 5.2 45 107-151 58-129 (686)
382 2wan_A Pullulanase; hydrolase, 55.6 11 0.00039 39.8 5.0 48 105-152 473-554 (921)
383 3tr2_A Orotidine 5'-phosphate 55.5 11 0.00036 33.8 4.2 92 39-142 19-111 (239)
384 1bqc_A Protein (beta-mannanase 55.5 13 0.00045 32.9 4.8 47 105-151 36-86 (302)
385 3l0g_A Nicotinate-nucleotide p 55.3 37 0.0013 31.8 8.0 41 198-248 217-257 (300)
386 3v8e_A Nicotinamidase; hydrola 55.3 6.4 0.00022 34.3 2.7 64 78-148 148-215 (216)
387 4awe_A Endo-beta-D-1,4-mannana 55.2 12 0.00042 32.1 4.4 53 100-152 36-123 (387)
388 1hg3_A Triosephosphate isomera 55.2 13 0.00045 33.1 4.8 46 107-152 81-126 (225)
389 4ab4_A Xenobiotic reductase B; 54.9 52 0.0018 31.1 9.1 20 198-217 245-264 (362)
390 2hsa_B 12-oxophytodienoate red 54.8 38 0.0013 32.3 8.2 24 191-217 259-288 (402)
391 1g5a_A Amylosucrase; glycosylt 54.5 13 0.00043 37.5 5.0 50 103-152 115-185 (628)
392 3oa3_A Aldolase; structural ge 54.4 25 0.00084 32.8 6.6 126 29-212 66-205 (288)
393 3aj7_A Oligo-1,6-glucosidase; 54.4 13 0.00045 36.9 5.1 47 106-152 45-110 (589)
394 1qo2_A Molecule: N-((5-phospho 54.4 13 0.00043 32.2 4.4 22 102-123 31-52 (241)
395 4e8d_A Glycosyl hydrolase, fam 54.2 16 0.00055 37.3 5.7 53 100-152 31-93 (595)
396 3jr2_A Hexulose-6-phosphate sy 54.1 36 0.0012 29.1 7.2 21 202-223 181-201 (218)
397 2y7e_A 3-keto-5-aminohexanoate 54.0 8.9 0.00031 35.5 3.5 47 189-239 31-77 (282)
398 2qw5_A Xylose isomerase-like T 53.8 39 0.0013 30.1 7.7 76 45-121 35-128 (335)
399 4ab4_A Xenobiotic reductase B; 53.8 30 0.001 32.7 7.3 39 198-242 290-329 (362)
400 3bc9_A AMYB, alpha amylase, ca 53.7 16 0.00056 36.5 5.7 50 103-152 152-231 (599)
401 2c0h_A Mannan endo-1,4-beta-ma 53.6 10 0.00035 33.9 3.8 49 102-150 46-111 (353)
402 3apt_A Methylenetetrahydrofola 53.5 1.3E+02 0.0044 27.6 11.3 138 39-214 27-179 (310)
403 1d3c_A Cyclodextrin glycosyltr 53.5 12 0.00041 37.8 4.7 48 104-151 58-137 (686)
404 3cz8_A Putative sporulation-sp 53.4 26 0.00088 31.8 6.5 65 74-141 57-136 (319)
405 1p0k_A Isopentenyl-diphosphate 53.3 39 0.0013 31.0 7.8 18 105-122 193-210 (349)
406 2w6r_A Imidazole glycerol phos 53.3 17 0.00059 31.6 5.1 40 102-141 31-71 (266)
407 3gka_A N-ethylmaleimide reduct 53.1 50 0.0017 31.1 8.7 20 198-217 253-272 (361)
408 1wza_A Alpha-amylase A; hydrol 53.1 13 0.00043 35.6 4.6 46 107-152 33-104 (488)
409 2g0w_A LMO2234 protein; putati 53.0 41 0.0014 29.4 7.6 19 102-120 106-124 (296)
410 3gka_A N-ethylmaleimide reduct 53.0 31 0.0011 32.6 7.2 38 198-241 298-336 (361)
411 3lab_A Putative KDPG (2-keto-3 53.0 6.1 0.00021 35.3 2.2 51 72-141 95-155 (217)
412 4fxs_A Inosine-5'-monophosphat 52.9 98 0.0034 30.2 11.0 65 41-121 234-300 (496)
413 3hm7_A Allantoinase; metallo-d 52.7 1.2E+02 0.0041 28.0 11.1 81 67-152 166-270 (448)
414 3hu5_A Isochorismatase family 52.6 8.6 0.00029 32.9 3.0 83 51-147 100-184 (204)
415 3o6c_A PNP synthase, pyridoxin 52.4 13 0.00043 34.4 4.2 46 68-123 109-154 (260)
416 1edg_A Endoglucanase A; family 52.3 19 0.00064 33.2 5.5 60 92-152 53-123 (380)
417 2ze0_A Alpha-glucosidase; TIM 52.3 15 0.00052 35.9 5.1 48 105-152 35-101 (555)
418 1gte_A Dihydropyrimidine dehyd 52.2 41 0.0014 35.7 8.7 73 102-214 649-734 (1025)
419 3sr7_A Isopentenyl-diphosphate 52.2 19 0.00064 34.3 5.5 112 66-217 99-239 (365)
420 1sfl_A 3-dehydroquinate dehydr 52.1 65 0.0022 28.4 8.8 106 68-214 45-161 (238)
421 3k13_A 5-methyltetrahydrofolat 52.1 58 0.002 30.1 8.8 101 42-145 42-171 (300)
422 3aml_A OS06G0726400 protein; s 51.9 16 0.00054 37.9 5.3 47 106-152 207-273 (755)
423 1tz9_A Mannonate dehydratase; 51.5 17 0.00059 33.4 5.1 45 103-147 23-72 (367)
424 1ji1_A Alpha-amylase I; beta/a 51.3 14 0.00046 37.0 4.6 46 107-152 197-265 (637)
425 1rh9_A Endo-beta-mannanase; en 51.3 24 0.00084 31.9 6.0 53 100-152 41-107 (373)
426 3icg_A Endoglucanase D; cellul 51.1 12 0.00039 36.6 4.0 55 98-152 42-108 (515)
427 2yr1_A 3-dehydroquinate dehydr 51.0 67 0.0023 28.7 8.8 104 68-214 61-175 (257)
428 3l5a_A NADH/flavin oxidoreduct 50.8 30 0.001 33.4 6.8 25 191-218 263-288 (419)
429 1ub3_A Aldolase protein; schif 50.8 39 0.0013 29.8 7.1 126 29-212 11-150 (220)
430 2r14_A Morphinone reductase; H 50.7 16 0.00054 34.7 4.7 120 71-241 218-348 (377)
431 3vgf_A Malto-oligosyltrehalose 50.6 18 0.0006 35.7 5.3 136 105-248 123-285 (558)
432 3ttq_A Dextransucrase; (beta/a 50.4 16 0.00054 40.0 5.2 50 103-152 855-935 (1108)
433 3ovp_A Ribulose-phosphate 3-ep 50.2 48 0.0016 29.1 7.5 38 101-142 17-60 (228)
434 2yci_X 5-methyltetrahydrofolat 50.2 72 0.0024 28.9 8.9 100 43-145 40-162 (271)
435 1yht_A DSPB; beta barrel, hydr 50.1 24 0.00082 33.3 5.9 74 66-152 29-117 (367)
436 2vr5_A Glycogen operon protein 49.8 19 0.00064 36.9 5.5 47 106-152 207-289 (718)
437 2yv2_A Succinyl-COA synthetase 49.8 22 0.00074 32.5 5.4 45 100-147 81-126 (297)
438 3r2j_A Alpha/beta-hydrolase-li 49.7 8.7 0.0003 33.9 2.6 64 78-148 151-216 (227)
439 1r30_A Biotin synthase; SAM ra 49.4 30 0.001 31.8 6.4 139 67-244 99-243 (369)
440 3thd_A Beta-galactosidase; TIM 49.3 21 0.00071 36.9 5.6 53 100-152 39-101 (654)
441 3hv8_A Protein FIMX; EAL phosp 49.1 39 0.0013 29.3 6.7 89 63-152 113-230 (268)
442 4ef8_A Dihydroorotate dehydrog 48.9 1.8E+02 0.006 27.4 11.7 49 67-124 176-231 (354)
443 3u0h_A Xylose isomerase domain 48.8 59 0.002 27.5 7.8 86 57-146 4-100 (281)
444 3vzx_A Heptaprenylglyceryl pho 48.8 35 0.0012 30.5 6.5 47 101-152 140-189 (228)
445 3aof_A Endoglucanase; glycosyl 48.4 24 0.00081 31.2 5.3 18 104-121 36-53 (317)
446 1p4c_A L(+)-mandelate dehydrog 48.3 45 0.0015 31.4 7.5 27 101-127 136-162 (380)
447 3tfx_A Orotidine 5'-phosphate 48.3 43 0.0015 30.4 7.1 91 39-141 15-107 (259)
448 2hjp_A Phosphonopyruvate hydro 48.3 45 0.0015 30.7 7.3 134 111-280 32-224 (290)
449 2yv1_A Succinyl-COA ligase [AD 48.0 18 0.00062 33.0 4.6 45 100-147 80-125 (294)
450 3jug_A Beta-mannanase; TIM-bar 48.0 28 0.00097 32.4 6.0 17 102-118 88-104 (345)
451 1tg7_A Beta-galactosidase; TIM 47.9 15 0.00052 39.5 4.5 51 101-151 36-96 (971)
452 2otd_A Glycerophosphodiester p 47.8 34 0.0012 29.7 6.1 96 42-148 96-212 (247)
453 1yac_A Ycacgp, YCAC gene produ 47.6 9.2 0.00031 33.0 2.4 65 77-148 98-164 (208)
454 1bf2_A Isoamylase; hydrolase, 47.5 23 0.00079 36.4 5.7 46 107-152 211-295 (750)
455 3bmv_A Cyclomaltodextrin gluca 47.5 18 0.00062 36.5 4.9 50 103-152 57-139 (683)
456 1kwg_A Beta-galactosidase; TIM 47.4 14 0.00047 37.1 4.0 47 102-150 15-71 (645)
457 2j6v_A UV endonuclease, UVDE; 47.3 82 0.0028 28.6 8.9 86 40-125 60-168 (301)
458 2qt3_A N-isopropylammelide iso 47.2 60 0.0021 29.0 7.9 74 68-146 196-275 (403)
459 1cyg_A Cyclodextrin glucanotra 47.1 14 0.00047 37.4 3.9 50 103-152 54-134 (680)
460 3pzg_A Mannan endo-1,4-beta-ma 47.1 25 0.00086 33.5 5.6 52 101-152 43-122 (383)
461 3sgz_A Hydroxyacid oxidase 2; 47.1 95 0.0033 29.4 9.5 33 99-131 133-165 (352)
462 3glc_A Aldolase LSRF; TIM barr 47.0 38 0.0013 31.3 6.6 130 42-223 130-264 (295)
463 4ef8_A Dihydroorotate dehydrog 47.0 47 0.0016 31.3 7.4 66 112-214 153-227 (354)
464 3aty_A Tcoye, prostaglandin F2 47.0 49 0.0017 31.3 7.6 25 191-218 265-289 (379)
465 2wsk_A Glycogen debranching en 47.0 19 0.00066 36.3 5.0 47 106-152 184-264 (657)
466 3fnd_A Chitinase; TIM-barrel, 46.9 39 0.0013 30.6 6.6 71 70-141 52-132 (312)
467 2ze3_A DFA0005; organic waste 46.9 31 0.0011 31.5 6.0 43 236-280 178-222 (275)
468 1eep_A Inosine 5'-monophosphat 46.8 1.2E+02 0.004 28.5 10.2 55 54-121 166-222 (404)
469 3inp_A D-ribulose-phosphate 3- 46.8 77 0.0026 28.4 8.5 38 101-142 40-83 (246)
470 3zss_A Putative glucanohydrola 46.7 25 0.00086 36.2 5.8 51 103-153 255-344 (695)
471 1ece_A Endocellulase E1; glyco 46.7 19 0.00066 32.4 4.5 51 102-152 45-117 (358)
472 3klk_A Glucansucrase; native f 46.6 22 0.00074 38.6 5.5 46 107-152 692-768 (1039)
473 2ob3_A Parathion hydrolase; me 46.5 1.7E+02 0.0057 26.5 12.5 53 198-251 203-270 (330)
474 3fs2_A 2-dehydro-3-deoxyphosph 46.5 43 0.0015 31.2 6.9 41 198-238 243-288 (298)
475 3nav_A Tryptophan synthase alp 46.4 91 0.0031 28.3 9.0 20 198-217 220-239 (271)
476 1o66_A 3-methyl-2-oxobutanoate 46.3 73 0.0025 29.4 8.3 138 109-279 32-218 (275)
477 4hty_A Cellulase; (alpha/beta) 46.2 26 0.00087 32.2 5.3 70 82-152 63-143 (359)
478 3r12_A Deoxyribose-phosphate a 46.0 61 0.0021 29.6 7.7 68 39-121 57-131 (260)
479 3can_A Pyruvate-formate lyase- 46.0 1.1E+02 0.0038 24.6 8.8 85 55-152 5-101 (182)
480 1xla_A D-xylose isomerase; iso 45.9 29 0.001 32.3 5.7 69 72-145 35-131 (394)
481 2c6q_A GMP reductase 2; TIM ba 45.3 96 0.0033 28.9 9.2 43 71-123 147-191 (351)
482 2y8v_A CHIC, class III chitina 45.3 54 0.0018 29.5 7.3 69 71-141 73-151 (290)
483 2nv1_A Pyridoxal biosynthesis 45.0 15 0.00052 33.3 3.5 77 40-131 31-114 (305)
484 1olt_A Oxygen-independent copr 45.0 39 0.0013 32.3 6.6 106 39-147 119-237 (457)
485 3khj_A Inosine-5-monophosphate 44.9 2E+02 0.0068 26.9 11.4 17 200-216 221-237 (361)
486 3o94_A Nicotinamidase; hydrola 44.9 15 0.00051 32.1 3.3 80 56-148 121-203 (211)
487 2f6u_A GGGPS, (S)-3-O-geranylg 44.6 20 0.00069 32.1 4.2 47 100-152 148-199 (234)
488 1n7k_A Deoxyribose-phosphate a 44.6 29 0.00098 31.1 5.2 81 41-126 92-173 (234)
489 3c6c_A 3-keto-5-aminohexanoate 44.5 18 0.00063 34.0 4.1 48 189-239 45-92 (316)
490 1p0k_A Isopentenyl-diphosphate 44.4 27 0.00094 32.1 5.2 40 103-142 129-176 (349)
491 2yfo_A Alpha-galactosidase-suc 44.3 27 0.00093 36.0 5.7 56 90-145 335-407 (720)
492 3ndo_A Deoxyribose-phosphate a 44.1 55 0.0019 29.3 7.0 79 42-125 85-170 (231)
493 1iv8_A Maltooligosyl trehalose 43.7 20 0.00067 37.4 4.5 47 106-152 22-88 (720)
494 2pz0_A Glycerophosphoryl diest 43.3 44 0.0015 29.2 6.2 96 42-148 101-216 (252)
495 4h3d_A 3-dehydroquinate dehydr 43.2 1.3E+02 0.0044 26.9 9.4 128 42-214 30-175 (258)
496 3tdn_A FLR symmetric alpha-bet 43.2 20 0.0007 31.0 4.0 86 25-122 79-177 (247)
497 3lot_A Uncharacterized protein 43.2 20 0.00068 33.6 4.1 79 188-270 28-121 (314)
498 1ps9_A 2,4-dienoyl-COA reducta 43.2 45 0.0015 33.2 7.0 21 191-214 227-247 (671)
499 2tps_A Protein (thiamin phosph 42.9 84 0.0029 26.3 7.7 54 54-122 45-102 (227)
500 3k1d_A 1,4-alpha-glucan-branch 42.8 28 0.00095 36.0 5.5 48 105-152 268-335 (722)
No 1
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=100.00 E-value=5.3e-92 Score=648.52 Aligned_cols=233 Identities=21% Similarity=0.391 Sum_probs=222.1
Q ss_pred CCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHH
Q 022296 19 EKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIR 97 (299)
Q Consensus 19 ~KPR~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~ 97 (299)
+|||++|+|||+|||+ |+++++|+|++||+|||++|||||||+|||++.|++||++||+|||+|||| ||||+|+.
T Consensus 8 ~KPR~~GlT~v~dkgl----g~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~ 83 (251)
T 1qwg_A 8 YEDFQRGLTVVLDKGL----PPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYS 83 (251)
T ss_dssp CCCCCCCCEEEEESSC----CHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHH
T ss_pred CCCcccCeeEEecCCC----CHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHH
Confidence 9999999999999998 888999999999999999999999999999999999999999999999998 59999999
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
|| ++++|+++||++||++|||||||++||+++|+++|+++++.||+|+||+|+|++.. +
T Consensus 84 qg--~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~------~------------- 142 (251)
T 1qwg_A 84 KG--KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDK------D------------- 142 (251)
T ss_dssp TT--CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHH------H-------------
T ss_pred cC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcc------c-------------
Confidence 99 99999999999999999999999999999999999999999999999999986621 1
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc------ccccCCCcccHHHHHHHHhccCCCceEEecCCch
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD------DVCKHADSLRADIIAKVIGRLGLEKTMFEATNPR 251 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar------gi~d~~G~~r~d~i~~ii~~l~~eklifEAP~k~ 251 (299)
..++++++ |+++++||+|||++|||||| |||+++|+||+|++++|++++|++|||||||+|+
T Consensus 143 ---------~~~~~~~~---I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~~l~~eklifEAp~k~ 210 (251)
T 1qwg_A 143 ---------KQLTIDDR---IKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAPQKS 210 (251)
T ss_dssp ---------TTCCHHHH---HHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEEECCSHH
T ss_pred ---------CCCCHHHH---HHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHHhCChhhEEEECCChH
Confidence 01348888 99999999999999999998 9999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCCcccc-cCCCCchhhhhhhcccCCCcc
Q 022296 252 TSEWFIRRYGPKVNLF-VDHSQVMDLECLRGRNLGKSH 288 (299)
Q Consensus 252 qQ~~fI~~fG~~VNLg-I~~~eVi~LE~LR~~~~G~~~ 288 (299)
||+|||++|||||||| |+|+||++|||||+|+||.+.
T Consensus 211 qq~~fI~~fG~~VNLgNI~~~eVi~LE~LR~GLrgDT~ 248 (251)
T 1qwg_A 211 QQVAFILKFGSSVNLANIAFDEVISLETLRRGLRGDTF 248 (251)
T ss_dssp HHHHHHHHHCTTCCEEEEEGGGHHHHHHHHHTCSGGGT
T ss_pred HHHHHHHHhCCCccccCCCHHHHHHHHHHHcccccccc
Confidence 9999999999999998 999999999999999988654
No 2
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=100.00 E-value=7.5e-91 Score=647.19 Aligned_cols=241 Identities=21% Similarity=0.353 Sum_probs=210.9
Q ss_pred cccCC-CCCCCCCCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCcee
Q 022296 8 WKSFD-EYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV 86 (299)
Q Consensus 8 ~~~f~-~~~~R~~KPR~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v 86 (299)
|+.|. ++|.|++|||.+|+|||+|||+ |+++++|+|++||+|||++||||||++|||+ |++||++||+|||+|
T Consensus 23 m~~~~f~~~~R~~KPR~~GlT~v~Dkgl----g~~~~~DlLe~ag~yID~lKfg~GTs~l~~~--l~ekI~l~~~~gV~v 96 (276)
T 1u83_A 23 MNDFSLELPVRTNKPRETGQSILIDNGY----PLQFFKDAIAGASDYIDFVKFGWGTSLLTKD--LEEKISTLKEHDITF 96 (276)
T ss_dssp --CCCCCCCCCCCSSCSSSCEEEEESSC----CHHHHHHHHHHHGGGCCEEEECTTGGGGCTT--HHHHHHHHHHTTCEE
T ss_pred cccccCCCCCcCCCCcccCceEEecCCC----CHHHHHHHHHHhhhhcceEEecCcchhhhHH--HHHHHHHHHHcCCeE
Confidence 44555 3699999999999999999998 8889999999999999999999999999997 999999999999999
Q ss_pred cCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccc
Q 022296 87 STG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR 165 (299)
Q Consensus 87 ~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~ 165 (299)
||| ||||+|+.|| ++++|+++||++||++|||||||++||+++|+++|+++++. |+|+||+|+|++.. +.
T Consensus 97 ~~GGTlfE~~l~qg--~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~------~~ 167 (276)
T 1u83_A 97 FFGGTLFEKYVSQK--KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAEL------AS 167 (276)
T ss_dssp EECHHHHHHHHHTT--CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC-----------
T ss_pred eCCcHHHHHHHHcC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCccc------cC
Confidence 997 5999999999 99999999999999999999999999999999999999999 99999999997621 10
Q ss_pred cccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-----ccccCCCcccHHHH-HHHHhccC
Q 022296 166 AFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-----DVCKHADSLRADII-AKVIGRLG 239 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-----gi~d~~G~~r~d~i-~~ii~~l~ 239 (299)
.++++++ |+++++||+|||++|||||| |||+++|+||+|++ ++|++++|
T Consensus 168 ----------------------~~~~~~~---I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r~d~v~~~i~~~l~ 222 (276)
T 1u83_A 168 ----------------------RQSSEEW---LEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDID 222 (276)
T ss_dssp -----------------------CCSTHH---HHHHHHHHHHTEEEEEEC------------------CCHHHHHTTTSC
T ss_pred ----------------------CCCHHHH---HHHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCcHHHHHHHHHhhCC
Confidence 1337788 99999999999999999996 89999999999999 99999999
Q ss_pred CCceEEecCCchhHHHHHHHhCCCcccc-cCCCCchhhhhhhcccCCCcc
Q 022296 240 LEKTMFEATNPRTSEWFIRRYGPKVNLF-VDHSQVMDLECLRGRNLGKSH 288 (299)
Q Consensus 240 ~eklifEAP~k~qQ~~fI~~fG~~VNLg-I~~~eVi~LE~LR~~~~G~~~ 288 (299)
++|||||||+|+||+|||++|||||||| |+|+||++|||||+|+||.+.
T Consensus 223 ~eklifEAp~k~qq~~fI~~fGp~VNLgNI~~~eVi~LE~LR~GLrgDT~ 272 (276)
T 1u83_A 223 INRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTF 272 (276)
T ss_dssp GGGEEEECCSHHHHHHHHHHHCTTCCEEEEEGGGHHHHHHHHTTCSGGGC
T ss_pred hhhEEEECCCHHHHHHHHHHhCCCccccCCCHHHHHHHHHHHcccccccc
Confidence 9999999999999999999999999998 999999999999999988653
No 3
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=96.10 E-value=0.077 Score=48.44 Aligned_cols=160 Identities=11% Similarity=0.062 Sum_probs=102.8
Q ss_pred hhHHHHHHHhhcccccEEEeeCccc--------ccCChhH---HHHHHHHHHhCCceec--CCc-H-HHHHHHhCCchHH
Q 022296 40 HNVLEDIFESMGQFVDGLKFSGGSH--------SLMPKPF---IEEVVKRAHQHDVYVS--TGD-W-AEHLIRNGPSAFK 104 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs--------~l~p~~~---l~eKI~l~~~~gV~v~--~Gt-l-fE~a~~qg~~~~~ 104 (299)
...++..+++ -+|.+-+...+| -...++. +++-++.+|++|+.|. .++ + .|.....+|+.+.
T Consensus 82 ~~~i~~a~~~---G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~ 158 (295)
T 1ydn_A 82 MKGYEAAAAA---HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVA 158 (295)
T ss_dssp HHHHHHHHHT---TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHH
T ss_pred HHHHHHHHHC---CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHH
Confidence 3445555554 466676665555 2233333 4566999999999875 121 1 1333344555677
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhccc
Q 022296 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLA 184 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~ 184 (299)
++++.+.+.|.+.|=|.|-.--+.+++-.++|+.+++. +.- ..+++.+.. |
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~~-~~l~~H~Hn-------~-------------------- 209 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI-APA-HSLAGHYHD-------T-------------------- 209 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT-SCG-GGEEEEEBC-------T--------------------
T ss_pred HHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CCC-CeEEEEECC-------C--------------------
Confidence 77777779999999999866678888889999999884 110 124443210 1
Q ss_pred CCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc------CCCcccHHHHHHHHhccCC
Q 022296 185 SNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 185 ~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d------~~G~~r~d~i~~ii~~l~~ 240 (299)
...- ...+...++|||++|=+=--|+-. ..||+..+.+-..+...|.
T Consensus 210 ------~Gla---~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~ 262 (295)
T 1ydn_A 210 ------GGRA---LDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGF 262 (295)
T ss_dssp ------TSCH---HHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTC
T ss_pred ------cchH---HHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCC
Confidence 1122 555688899999977654347766 7899998877766665553
No 4
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.93 E-value=0.11 Score=45.14 Aligned_cols=126 Identities=6% Similarity=0.108 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL--EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTD 179 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~ 179 (299)
.+++.++.++++||+.||+....+ .++.++..++.+.+++.|+++.. ++.-.. +
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~-------~---------------- 86 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA-VGPIYM-------K---------------- 86 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE-EEEEEE-------C----------------
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE-Eecccc-------C----------------
Confidence 689999999999999999998743 56678888999999999998653 332100 0
Q ss_pred hhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecCC--------ch
Q 022296 180 KLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATN--------PR 251 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP~--------k~ 251 (299)
+++.+ .+.++..-+.||.+|.+... .. .-..+.++++..|+ ++.+|.-. ..
T Consensus 87 ----------~~~~~---~~~i~~A~~lGa~~v~~~p~-----~~--~l~~l~~~a~~~gv-~l~lEn~~~~~~~~~~~~ 145 (257)
T 3lmz_A 87 ----------SEEEI---DRAFDYAKRVGVKLIVGVPN-----YE--LLPYVDKKVKEYDF-HYAIHLHGPDIKTYPDAT 145 (257)
T ss_dssp ----------SHHHH---HHHHHHHHHHTCSEEEEEEC-----GG--GHHHHHHHHHHHTC-EEEEECCCTTCSSSCSHH
T ss_pred ----------CHHHH---HHHHHHHHHhCCCEEEecCC-----HH--HHHHHHHHHHHcCC-EEEEecCCCcccccCCHH
Confidence 04455 55566677789999998642 11 22345556666665 35566542 33
Q ss_pred hHHHHHHHhCCCcccccCCCC
Q 022296 252 TSEWFIRRYGPKVNLFVDHSQ 272 (299)
Q Consensus 252 qQ~~fI~~fG~~VNLgI~~~e 272 (299)
+-..+++..+|+|-+-.|...
T Consensus 146 ~~~~ll~~~~p~vg~~~D~~h 166 (257)
T 3lmz_A 146 DVWVHTKDLDPRIGMCLDVGH 166 (257)
T ss_dssp HHHHHHTTSCTTEEEEEEHHH
T ss_pred HHHHHHHhCCCCccEEEchhh
Confidence 445566655565544344433
No 5
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.61 E-value=0.057 Score=46.13 Aligned_cols=144 Identities=15% Similarity=0.022 Sum_probs=86.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
.+...-++++.+++++|++|.|+=.+.-... +-|+..+++ +++++...-+ .. -.+.+++.|.+.|.|
T Consensus 11 ~~~~~~~~~~~~~~~~diie~G~p~~~~~g~----~~i~~ir~~~~~~~i~~~~~~-----~~--~~~~~~~~~~~~Gad 79 (211)
T 3f4w_A 11 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGV----NAIKAIKEKYPHKEVLADAKI-----MD--GGHFESQLLFDAGAD 79 (211)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHTT----HHHHHHHHHCTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhhcCccEEEeCcHHHHhccH----HHHHHHHHhCCCCEEEEEEEe-----cc--chHHHHHHHHhcCCC
Confidence 4556777778777899999999721111122 234444443 6666543211 12 233458999999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCccccee-eeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhh
Q 022296 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF-AVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGI 195 (299)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~-gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (299)
.|=+.+-. +.+...++++.+++.|+++..++ +. | ..
T Consensus 80 ~v~v~~~~---~~~~~~~~~~~~~~~g~~~~v~~~~~-----------------------~----------------t~- 116 (211)
T 3f4w_A 80 YVTVLGVT---DVLTIQSCIRAAKEAGKQVVVDMICV-----------------------D----------------DL- 116 (211)
T ss_dssp EEEEETTS---CHHHHHHHHHHHHHHTCEEEEECTTC-----------------------S----------------SH-
T ss_pred EEEEeCCC---ChhHHHHHHHHHHHcCCeEEEEecCC-----------------------C----------------CH-
Confidence 99996543 34566789999999887755431 11 1 11
Q ss_pred hhHHHHHHHHHccCcEEEEeccccccC-CCcccHHHHHHHHhccC
Q 022296 196 NKSRRAERCLEAGADMIMIDSDDVCKH-ADSLRADIIAKVIGRLG 239 (299)
Q Consensus 196 ~~i~~~~~dLeAGA~~VIiEargi~d~-~G~~r~d~i~~ii~~l~ 239 (299)
.++++..+++|+++|.+.. |.... .+....+.+.++.+.++
T Consensus 117 --~~~~~~~~~~g~d~i~v~~-g~~g~~~~~~~~~~i~~l~~~~~ 158 (211)
T 3f4w_A 117 --PARVRLLEEAGADMLAVHT-GTDQQAAGRKPIDDLITMLKVRR 158 (211)
T ss_dssp --HHHHHHHHHHTCCEEEEEC-CHHHHHTTCCSHHHHHHHHHHCS
T ss_pred --HHHHHHHHHcCCCEEEEcC-CCcccccCCCCHHHHHHHHHHcC
Confidence 4556888999999998862 21110 11113466666665543
No 6
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.58 E-value=0.22 Score=43.21 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=66.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS------------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~ 169 (299)
.+++.++.++++||++||+.... ..++.++..++-+.+++.|+++.. ++.-.+ .
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~-------~------ 88 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG-TGVYVA-------E------ 88 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE-EEEECC-------S------
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE-EeccCC-------c------
Confidence 68999999999999999998652 356788888999999999998643 222100 0
Q ss_pred cccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEec
Q 022296 170 YVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEA 247 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEA 247 (299)
..+.+ -+.++.+-+.||..|.+... .-.-..+.++++..|+ ++.+|.
T Consensus 89 --------------------~~~~~---~~~i~~A~~lGa~~v~~~~~-------~~~~~~l~~~a~~~gv-~l~~En 135 (262)
T 3p6l_A 89 --------------------KSSDW---EKMFKFAKAMDLEFITCEPA-------LSDWDLVEKLSKQYNI-KISVHN 135 (262)
T ss_dssp --------------------STTHH---HHHHHHHHHTTCSEEEECCC-------GGGHHHHHHHHHHHTC-EEEEEC
T ss_pred --------------------cHHHH---HHHHHHHHHcCCCEEEecCC-------HHHHHHHHHHHHHhCC-EEEEEe
Confidence 02344 44456666789999999752 1122345555555554 355554
No 7
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=95.54 E-value=0.082 Score=45.72 Aligned_cols=139 Identities=21% Similarity=0.237 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+++.++.++++||+.||+... .+...+..++.+.+++.|+++..--.--+ . .. .|+ ..+ +
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~---~~-~d~--------~~r--~-- 79 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRD--QVAAIGLGEAGRIVRANGLKLTGLCRGGF-F---PA-PDA--------SGR--E-- 79 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHH--HHHHHCHHHHHHHHHHHTCEESCEEEEEC-C---CC-SSH--------HHH--H--
T ss_pred CHHHHHHHHHHcCCCEEEeccc--cccccCHHHHHHHHHHcCCceEEeecCCC-c---CC-CCH--------HHH--H--
Confidence 6889999999999999999764 23456677888899999998764221111 1 11 110 000 0
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCc----c--cHHHHHHH---HhccCCCceEEecC----
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADS----L--RADIIAKV---IGRLGLEKTMFEAT---- 248 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~----~--r~d~i~~i---i~~l~~eklifEAP---- 248 (299)
-.++.+ .+.++..-+.||..|++-+-........ + -.+.+.++ ++..|+ ++.+|.-
T Consensus 80 -------~~~~~~---~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lE~~~~~~ 148 (275)
T 3qc0_A 80 -------KAIDDN---RRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGV-PLAIEPLHPMY 148 (275)
T ss_dssp -------HHHHHH---HHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTC-CEEECCCCGGG
T ss_pred -------HHHHHH---HHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeECCCcc
Confidence 013444 4445555667999999876322211101 0 01223333 334455 5888851
Q ss_pred --------CchhHHHHHHHhCCCcccc--cCCCC
Q 022296 249 --------NPRTSEWFIRRYGPKVNLF--VDHSQ 272 (299)
Q Consensus 249 --------~k~qQ~~fI~~fG~~VNLg--I~~~e 272 (299)
...+-..+++..++ |+| .|...
T Consensus 149 ~~~~~~~~~~~~~~~l~~~~~~--~vg~~~D~~h 180 (275)
T 3qc0_A 149 AADRACVNTLGQALDICETLGP--GVGVAIDVYH 180 (275)
T ss_dssp TTTTBSCCCHHHHHHHHHHHCT--TEEEEEEHHH
T ss_pred cCCccccCCHHHHHHHHHHhCc--ccEEEEEhhh
Confidence 34567789999998 665 55443
No 8
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.44 E-value=0.013 Score=55.62 Aligned_cols=139 Identities=18% Similarity=0.166 Sum_probs=81.8
Q ss_pred HHHHHHHHHHhC-------CceecCCcHHHHH-HHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHHH
Q 022296 71 FIEEVVKRAHQH-------DVYVSTGDWAEHL-IRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRYV 136 (299)
Q Consensus 71 ~l~eKI~l~~~~-------gV~v~~GtlfE~a-~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i--~~~~r~~lI 136 (299)
.+.|.|+-.++. +|++++..|.+-- +... ...++.+.+.+.|+|+|+||+|+.. + ++.....++
T Consensus 210 ~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~--~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~ 287 (363)
T 3l5l_A 210 FLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE--ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIA 287 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH--HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHH
T ss_pred HHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHH
Confidence 566777777754 3355654343211 2222 4566778888899999999998642 1 233345667
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEe
Q 022296 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMID 215 (299)
Q Consensus 137 ~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiE 215 (299)
+.+++. +. +|=++. | . ..+ .+.+++.|++| ||.|++
T Consensus 288 ~~ir~~-~~-iPVi~~-------G---g---------------------I~s---------~e~a~~~l~~G~aD~V~i- 324 (363)
T 3l5l_A 288 ERVRRE-AK-LPVTSA-------W---G---------------------FGT---------PQLAEAALQANQLDLVSV- 324 (363)
T ss_dssp HHHHHH-HT-CCEEEC-------S---S---------------------TTS---------HHHHHHHHHTTSCSEEEC-
T ss_pred HHHHHH-cC-CcEEEe-------C---C---------------------CCC---------HHHHHHHHHCCCccEEEe-
Confidence 776662 00 111111 0 0 011 45568899999 999988
Q ss_pred ccccccCCCcccHHHHHHHHhccCCCceEEecCCchhHHHHHHHhC
Q 022296 216 SDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNPRTSEWFIRRYG 261 (299)
Q Consensus 216 argi~d~~G~~r~d~i~~ii~~l~~eklifEAP~k~qQ~~fI~~fG 261 (299)
+|.+..+ .|++.++.+.++.+.. +...+.|..|++.+|+
T Consensus 325 GR~~lan-----Pdl~~k~~~~lg~~~~--~~~~~~~~~~~~~~~~ 363 (363)
T 3l5l_A 325 GRAHLAD-----PHWAYFAAKELGVEKA--SWTLPAPYAHWLERYR 363 (363)
T ss_dssp CHHHHHC-----TTHHHHHHHHTTCTTG--GGGSCHHHHHHHC---
T ss_pred cHHHHhC-----chHHHHHHHHcCCCcc--cCCCCchhHhHhhccC
Confidence 6655432 6789999998885321 2355678888877664
No 9
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.39 E-value=0.21 Score=45.90 Aligned_cols=156 Identities=15% Similarity=0.120 Sum_probs=101.8
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCChh-----------HHHHHHHHHHhCCceec------CCcHHHHHHHhCCchH
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKP-----------FIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSAF 103 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~~-----------~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~~~ 103 (299)
..++..+++ =+|.+-+..++|-++.+. .+++-++.+|++|+.|. .|.-++ -.-+|+.+
T Consensus 87 ~~i~~a~~a---G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~--~~~~~~~~ 161 (302)
T 2ftp_A 87 KGFEAALES---GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD--GDVDPRQV 161 (302)
T ss_dssp HHHHHHHHT---TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT--BCCCHHHH
T ss_pred HHHHHHHhC---CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--CCCCHHHH
Confidence 345555553 467777767776653322 34788999999999883 232112 12333456
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
.++++.+.+.|.+.|=|.|-.--+.+.+-.++|+.+++. +. .-.++..+. . |
T Consensus 162 ~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~l~~H~H-n------~------------------- 213 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE-VP-RERLAGHFH-D------T------------------- 213 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT-SC-GGGEEEEEB-C------T-------------------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEeC-C------C-------------------
Confidence 666666669999999999876678888888999999874 21 113444321 0 1
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc------CCCcccHHHHHHHHhccC
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLG 239 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d------~~G~~r~d~i~~ii~~l~ 239 (299)
...- +..+...++|||++|=+=-.|+=. ..||...+.+-..+...|
T Consensus 214 -------~Gla---~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g 265 (302)
T 2ftp_A 214 -------YGQA---LANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLE 265 (302)
T ss_dssp -------TSCH---HHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTT
T ss_pred -------ccHH---HHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcC
Confidence 1222 566688999999976433348877 789999888777776554
No 10
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=95.26 E-value=0.16 Score=44.87 Aligned_cols=144 Identities=15% Similarity=0.239 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-------cCChhHHHHHHHHHHHcCCcccceeeee-cCCCCCCCcccccccccccC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-------EIPEETLLRYVRLVKSAGLKAKPKFAVM-FNKSDIPSDRDRAFGAYVAR 173 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-------~i~~~~r~~lI~~~~~~G~~v~~E~gvK-~~~sevg~~~d~~~~~~~~~ 173 (299)
.+++.++.++++||+.||++.... .++.++..++.+.+++.|+++.. +..- +..-..++ .|+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~~~~~~~~l~~-~d~-------- 100 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS-MCLSAHRRFPLGS-EDD-------- 100 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE-EEEGGGGTSCTTC-SSH--------
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE-EecCcccCCCCCC-CCH--------
Confidence 799999999999999999986542 45677788899999999998753 2210 00000111 010
Q ss_pred CCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHH-------HH---HHHhccCCCce
Q 022296 174 APRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADI-------IA---KVIGRLGLEKT 243 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~-------i~---~ii~~l~~ekl 243 (299)
. ..+ -.++.+ .+.++..-+.||..|++-+-..+.. .-+.+. +. ++++..|+ +|
T Consensus 101 ~--~r~---------~~~~~~---~~~i~~A~~lG~~~v~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l 163 (295)
T 3cqj_A 101 A--VRA---------QGLEIM---RKAIQFAQDVGIRVIQLAGYDVYYQ--EANNETRRRFRDGLKESVEMASRAQV-TL 163 (295)
T ss_dssp H--HHH---------HHHHHH---HHHHHHHHHHTCCEEEECCCSCSSS--CCCHHHHHHHHHHHHHHHHHHHHHTC-EE
T ss_pred H--HHH---------HHHHHH---HHHHHHHHHcCCCEEEECCCCCCcC--cCHHHHHHHHHHHHHHHHHHHHHhCC-EE
Confidence 0 000 113445 4555666678999999865322111 112221 22 22333444 57
Q ss_pred EEecC------CchhHHHHHHHhCC-CcccccCCCC
Q 022296 244 MFEAT------NPRTSEWFIRRYGP-KVNLFVDHSQ 272 (299)
Q Consensus 244 ifEAP------~k~qQ~~fI~~fG~-~VNLgI~~~e 272 (299)
.+|.- ...+-..+++..|+ +|-+.+|...
T Consensus 164 ~lEn~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h 199 (295)
T 3cqj_A 164 AMEIMDYPLMNSISKALGYAHYLNNPWFQLYPDIGN 199 (295)
T ss_dssp EEECCSSGGGCSHHHHHHHHHHHCCTTEEEECBHHH
T ss_pred EEeeCCCcccCCHHHHHHHHHhcCCCCeEEEeccch
Confidence 78863 34667789999985 4444355433
No 11
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=95.21 E-value=0.2 Score=43.75 Aligned_cols=131 Identities=14% Similarity=0.134 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+++.++.++++||++||+......-+. +..++-+.+++.|+++..-..... .+ . +
T Consensus 24 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~-~~---~--~----------------- 79 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLEL-WR---E--D----------------- 79 (264)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEE-EC---T--T-----------------
T ss_pred CHHHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhh-cC---C--c-----------------
Confidence 5788999999999999999754332223 666788889999998643211100 00 0 0
Q ss_pred cccCCCccch-hhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecCCc------hhHH
Q 022296 182 FLASNPEIEV-GVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATNP------RTSE 254 (299)
Q Consensus 182 ~~~~~~~~~~-~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP~k------~qQ~ 254 (299)
. ++ +.+ .+.++.+-+.||..|.+-.-. +.... .-..+.++++..|+ ++.+|.-.. .+-.
T Consensus 80 -----~--~~~~~~---~~~i~~A~~lGa~~v~~~~g~-~~~~~--~l~~l~~~a~~~Gv-~l~lEn~~~~~~~~~~~~~ 145 (264)
T 1yx1_A 80 -----G--QLNPEL---EPTLRRAEACGAGWLKVSLGL-LPEQP--DLAALGRRLARHGL-QLLVENDQTPQGGRIEVLE 145 (264)
T ss_dssp -----S--SBCTTH---HHHHHHHHHTTCSEEEEEEEC-CCSSC--CHHHHHHHHTTSSC-EEEEECCSSHHHHCHHHHH
T ss_pred -----h--hHHHHH---HHHHHHHHHcCCCEEEEecCC-CCcHH--HHHHHHHHHHhcCC-EEEEecCCCCCCCCHHHHH
Confidence 0 12 444 455666677899999987632 22222 44556667777776 688886532 4556
Q ss_pred HHHHHh---CCCcccccCC
Q 022296 255 WFIRRY---GPKVNLFVDH 270 (299)
Q Consensus 255 ~fI~~f---G~~VNLgI~~ 270 (299)
.+++.. |++|-+-.|.
T Consensus 146 ~ll~~v~~~~~~vg~~~D~ 164 (264)
T 1yx1_A 146 RFFRLAERQQLDLAMTFDI 164 (264)
T ss_dssp HHHHHHHHTTCSEEEEEET
T ss_pred HHHHHHHhcCCCeEEEEeh
Confidence 788888 8765554555
No 12
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=95.19 E-value=0.21 Score=45.84 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=106.2
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCc
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPS 101 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~ 101 (299)
....++..+++ -+|.+-+...+|-.+.+ +.+++-++.+|++|+.|. .|- |..-..+++
T Consensus 82 ~~~~i~~a~~a---g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~--~~~~~~~~~ 156 (298)
T 2cw6_A 82 NLKGFEAAVAA---GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGC--PYEGKISPA 156 (298)
T ss_dssp SHHHHHHHHHT---TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCB--TTTBSCCHH
T ss_pred CHHhHHHHHHC---CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC--CcCCCCCHH
Confidence 34455666655 46777776666654322 356778999999999884 231 211123445
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+.++.+.+.++|.+.|=+.|-.--+.+++-.++|+.+++. +. .-.+++.+.. |
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~-~~-~~~i~~H~Hn-------~----------------- 210 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE-VP-LAALAVHCHD-------T----------------- 210 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH-SC-GGGEEEEEBC-------T-----------------
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEECC-------C-----------------
Confidence 67778888899999999999988889999999999999984 21 1134453211 1
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc------CCCcccHHHHHHHHhccC
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLG 239 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d------~~G~~r~d~i~~ii~~l~ 239 (299)
.... +..+...++|||+.|=.=--|+=. ..||..++.+-..+...|
T Consensus 211 ---------~Gla---~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g 262 (298)
T 2cw6_A 211 ---------YGQA---LANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLG 262 (298)
T ss_dssp ---------TSCH---HHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHT
T ss_pred ---------CchH---HHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcC
Confidence 1222 555677899999976542247766 799999988877776544
No 13
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=94.95 E-value=0.48 Score=44.46 Aligned_cols=156 Identities=15% Similarity=0.130 Sum_probs=107.3
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHH
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYV 107 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~G--tlfE~a~~qg~~~~~~yl 107 (299)
+.++..+++- +|.+-+-..+|-.+.+ +.+++-++.++++|+.|..+ .|+. .-...++.+.+..
T Consensus 100 ~~i~~a~~~g---~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~-~~~~~~~~~~~~~ 175 (337)
T 3ble_A 100 KTVDWIKDSG---AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSN-GFRNSPDYVKSLV 175 (337)
T ss_dssp HHHHHHHHHT---CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH-HHHHCHHHHHHHH
T ss_pred hhHHHHHHCC---CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC-CCcCCHHHHHHHH
Confidence 3555556544 4666665555543311 46788899999999987754 3322 3344555778888
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCC
Q 022296 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (299)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
+.+.++|.+.|=+.|-.--+.+.+-.++|+.+++. +. .-.+++.+. .|
T Consensus 176 ~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~p-~~~i~~H~H-------nd----------------------- 223 (337)
T 3ble_A 176 EHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQK-YP-DIHFEFHGH-------ND----------------------- 223 (337)
T ss_dssp HHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHH-CT-TSCEEEECB-------CT-----------------------
T ss_pred HHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHh-cC-CCeEEEEec-------CC-----------------------
Confidence 88899999999999988889999999999999984 10 123455321 11
Q ss_pred ccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 188 EIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 188 ~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
.... +..+...++|||+.|=.=--|+=...||..++.+-..+...
T Consensus 224 ---~GlA---~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 224 ---YDLS---VANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp ---TSCH---HHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred ---cchH---HHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 2333 66678899999996643335888899999988777666543
No 14
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=94.93 E-value=0.58 Score=40.29 Aligned_cols=139 Identities=12% Similarity=0.152 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--c-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL--E-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~-i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+++.++.++++||+.||+..... . .+..+..++-+.+++.|+++.+ ++.-.+.. . .|
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~~~~~---~-~~-------------- 80 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVT-INAVYPFN---Q-LT-------------- 80 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEE-EEEETTTT---S-CC--------------
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEe-chhhhccC---C-cH--------------
Confidence 688999999999999999985432 2 2446677788888999998654 22211111 0 01
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCccc---HHHHHH---HHhccCCCceEEecC----
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLR---ADIIAK---VIGRLGLEKTMFEAT---- 248 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r---~d~i~~---ii~~l~~eklifEAP---- 248 (299)
+ -..+.+ .+.++.+-+.||..|.+-+- .... ..++ .+.+.+ +++..|+ ++.+|.-
T Consensus 81 ~---------~~~~~~---~~~i~~a~~lG~~~v~~~~g-~~~~-~~~~~~~~~~l~~l~~~a~~~gv-~l~~E~~~~~~ 145 (272)
T 2q02_A 81 E---------EVVKKT---EGLLRDAQGVGARALVLCPL-NDGT-IVPPEVTVEAIKRLSDLFARYDI-QGLVEPLGFRV 145 (272)
T ss_dssp H---------HHHHHH---HHHHHHHHHHTCSEEEECCC-CSSB-CCCHHHHHHHHHHHHHHHHTTTC-EEEECCCCSTT
T ss_pred H---------HHHHHH---HHHHHHHHHhCCCEEEEccC-CCch-hHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCCCc
Confidence 0 003344 44555566789999988432 1111 1111 223333 3344554 5777753
Q ss_pred ----CchhHHHHHHHhCCCcccccCCCCch
Q 022296 249 ----NPRTSEWFIRRYGPKVNLFVDHSQVM 274 (299)
Q Consensus 249 ----~k~qQ~~fI~~fG~~VNLgI~~~eVi 274 (299)
...+-..+++..||+|.+.+|..+..
T Consensus 146 ~~~~~~~~~~~l~~~v~~~~g~~~D~~h~~ 175 (272)
T 2q02_A 146 SSLRSAVWAQQLIREAGSPFKVLLDTFHHH 175 (272)
T ss_dssp CSCCCHHHHHHHHHHHTCCCEEEEEHHHHH
T ss_pred ccccCHHHHHHHHHHhCcCeEEEEEchHhh
Confidence 34556689999996555545554443
No 15
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=94.82 E-value=0.37 Score=46.55 Aligned_cols=123 Identities=17% Similarity=0.277 Sum_probs=85.2
Q ss_pred ccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchH-HHHHHHHHHcCCCEEEecCCcc------
Q 022296 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAF-KEYVEDCKQVGFDTIELNVGSL------ 125 (299)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~-~~yl~~~k~lGF~~IEISdGti------ 125 (299)
++.+-||+||..+.+.+.+++.++.++++ ++.- + .|+.+.-+|+.+ ++.++.+++.|++.|+++--|.
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~--~--~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~ 180 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNA--D--AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR 180 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEE--E--EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHH
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCC--C--cEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHH
Confidence 78899999999999999999999999873 1100 0 011111233333 5789999999999999964443
Q ss_pred ----cCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHH
Q 022296 126 ----EIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRR 200 (299)
Q Consensus 126 ----~i~~~~r~~lI~~~~~~G~~-v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 200 (299)
.-+.++-.+.|+.+++.||. +...+=. +. + + .+.+.+ .+.
T Consensus 181 ~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~--Gl----P-g-------------------------et~e~~---~~t 225 (457)
T 1olt_A 181 LVNREQDEEFIFALLNHAREIGFTSTNIDLIY--GL----P-K-------------------------QTPESF---AFT 225 (457)
T ss_dssp HHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEE--SC----T-T-------------------------CCHHHH---HHH
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEc--CC----C-C-------------------------CCHHHH---HHH
Confidence 23567888999999999997 5554432 11 0 0 115666 777
Q ss_pred HHHHHHccCcEEEEe
Q 022296 201 AERCLEAGADMIMID 215 (299)
Q Consensus 201 ~~~dLeAGA~~VIiE 215 (299)
++..++.|.+.|-+=
T Consensus 226 l~~~~~l~~~~i~~y 240 (457)
T 1olt_A 226 LKRVAELNPDRLSVF 240 (457)
T ss_dssp HHHHHHHCCSEEEEE
T ss_pred HHHHHhcCcCEEEee
Confidence 888889999988764
No 16
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=94.63 E-value=0.48 Score=47.78 Aligned_cols=142 Identities=18% Similarity=0.163 Sum_probs=93.4
Q ss_pred HHHHHHhhcccccEEEeeCccc------ccCChhHHHHHHHHHHh--CCceecCCcHHHHHHHhC---------C-chHH
Q 022296 43 LEDIFESMGQFVDGLKFSGGSH------SLMPKPFIEEVVKRAHQ--HDVYVSTGDWAEHLIRNG---------P-SAFK 104 (299)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs------~l~p~~~l~eKI~l~~~--~gV~v~~GtlfE~a~~qg---------~-~~~~ 104 (299)
+-+.|..+| +|.+=.|||.+ .+.+ + =.+.++.+++ -++.+. .| .++ | +-.+
T Consensus 52 Ia~~L~~~G--v~~IE~G~patF~~~~rfl~~-d-~~e~lr~l~~~~~~~~l~--~L-----~R~~N~~G~~~ypddv~~ 120 (539)
T 1rqb_A 52 ACADIDAAG--YWSVECWGGATYDSCIRFLNE-D-PWERLRTFRKLMPNSRLQ--ML-----LRGQNLLGYRHYNDEVVD 120 (539)
T ss_dssp GHHHHHHTT--CSEEEEEETTHHHHHHHTSCC-C-HHHHHHHHHHHCTTSCEE--EE-----ECGGGTTSSSCCCHHHHH
T ss_pred HHHHHHHcC--CCEEEeCcccccccchhccCC-C-HHHHHHHHHHhCCCCEEE--EE-----eccccccCcccCcccccH
Confidence 345556666 88999999877 2222 1 2333333333 133221 11 121 1 1378
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhccc
Q 022296 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLA 184 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~ 184 (299)
.+++.+.+.|.+.|-|.+.+-++ +.-...|+.+++.|..|-.-+.- +.+. +
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G~~v~~~i~~-----~~~~-----------~----------- 171 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAGKHAQGTICY-----TISP-----------V----------- 171 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEEC-----CCST-----------T-----------
T ss_pred HHHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCCCeEEEEEEe-----eeCC-----------C-----------
Confidence 89999999999999999888777 55668999999999875332322 1111 1
Q ss_pred CCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 185 SNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 185 ~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
.+++.+ ++.+++-.++||+.| .|+|..|-.....+.++++
T Consensus 172 ----~~~e~~---~~~a~~l~~~Gad~I-----~L~DT~G~~~P~~v~~lv~ 211 (539)
T 1rqb_A 172 ----HTVEGY---VKLAGQLLDMGADSI-----ALKDMAALLKPQPAYDIIK 211 (539)
T ss_dssp ----CCHHHH---HHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHH
T ss_pred ----CCHHHH---HHHHHHHHHcCCCEE-----EeCCCCCCcCHHHHHHHHH
Confidence 126777 888999999999855 4788888888888887775
No 17
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=94.61 E-value=0.29 Score=42.95 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+++.++.++++||+.||+..... .++..++.+.+++.|+++.. +..-... ...+ .| +...+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~---~~~~~~~~~~l~~~gl~v~~-~~~~~~~-~l~~-~d----------~~~r~-- 100 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL---AGRVNEIKQALNGRNIKVSA-ICAGFKG-FILS-TD----------PAIRK-- 100 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC---GGGHHHHHHHHTTSSCEECE-EECCCCS-CTTB-SS----------HHHHH--
T ss_pred CHHHHHHHHHHcCCCEEEecCCch---HHHHHHHHHHHHHcCCeEEE-EecCCCC-cCCC-CC----------HHHHH--
Confidence 688999999999999999998743 45667788888889998754 2221000 0000 01 00000
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-ccccC----CCccc---HHHHHH---HHhccCCCceEEecC--
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-DVCKH----ADSLR---ADIIAK---VIGRLGLEKTMFEAT-- 248 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-gi~d~----~G~~r---~d~i~~---ii~~l~~eklifEAP-- 248 (299)
-.++.+ .+.++..-+.||..|++-+- +-++. ..... .+.+.+ +++..|+ +|.+|.=
T Consensus 101 -------~~~~~~---~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~~~ 169 (287)
T 3kws_A 101 -------ECMDTM---KEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGT-SVIFEPLNR 169 (287)
T ss_dssp -------HHHHHH---HHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTC-CEEECCCCT
T ss_pred -------HHHHHH---HHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEEecCc
Confidence 013444 44555566789999988542 22221 10111 122222 3344555 6888832
Q ss_pred -------CchhHHHHHHHhC-CCcccccCCCCc
Q 022296 249 -------NPRTSEWFIRRYG-PKVNLFVDHSQV 273 (299)
Q Consensus 249 -------~k~qQ~~fI~~fG-~~VNLgI~~~eV 273 (299)
...+-..+++..| |+|.+-+|....
T Consensus 170 ~~~~~~~~~~~~~~ll~~v~~~~vg~~~D~~h~ 202 (287)
T 3kws_A 170 KECFYLRQVADAASLCRDINNPGVRCMGDFWHM 202 (287)
T ss_dssp TTCSSCCCHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred ccCcccCCHHHHHHHHHHcCCCCeeEEeehHHH
Confidence 3456778999999 667665554443
No 18
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=94.27 E-value=0.36 Score=44.60 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=104.8
Q ss_pred HHHHHHHh---hcccccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHH
Q 022296 42 VLEDIFES---MGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYV 107 (299)
Q Consensus 42 ~l~DlLe~---ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl 107 (299)
.++..++. +| +|.+-+-..+|-+..+ +.+++-++.++++|..|..+- |.+-.-+++.+-++.
T Consensus 81 di~~a~~~~~~ag--~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--~d~~~~~~~~~~~~~ 156 (293)
T 3ewb_X 81 DIDRAEEALKDAV--SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP--EDATRSDRAFLIEAV 156 (293)
T ss_dssp HHHHHHHHHTTCS--SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE--ETGGGSCHHHHHHHH
T ss_pred HHHHHHHHHhhcC--CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe--ccCCCCCHHHHHHHH
Confidence 34445553 33 6766666666654422 236788899999999877542 223344555678888
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCcccccccccccCCCCccchhcccC
Q 022296 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLAS 185 (299)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v--~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~ 185 (299)
+.+.++|.+.|-+.|-.--+.+.+-.++|+.+++. +.- .-.+++.+.. |
T Consensus 157 ~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~~l~~H~Hn-------d--------------------- 207 (293)
T 3ewb_X 157 QTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRRE-IKQFDDIIFASHCHD-------D--------------------- 207 (293)
T ss_dssp HHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHH-CTTGGGSEEEEECBC-------T---------------------
T ss_pred HHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHh-cCCccCceEEEEeCC-------C---------------------
Confidence 99999999999999999999999999999999884 110 0125553221 1
Q ss_pred CCccchhhhhhhHHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHh
Q 022296 186 NPEIEVGVGINKSRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 186 ~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~ 236 (299)
.... +..+...++|||+ ++++- |+=...||.-++.+-..+.
T Consensus 208 -----~Gla---~AN~laA~~aGa~--~vd~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 208 -----LGMA---TANALAAIENGAR--RVEGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp -----TSCH---HHHHHHHHHTTCC--EEEEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred -----cChH---HHHHHHHHHhCCC--EEEeeccccccccccHhHHHHHHHHH
Confidence 2333 6667889999999 45775 8888999999887665554
No 19
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=94.14 E-value=0.62 Score=43.71 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.++++++.+.+.|.+.|.+.-|.- . .++++.+++.|+++ +++..
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~~---~---~~~i~~~~~~g~~v----~~~v~-------------------------- 153 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGVP---D---REVIARLRRAGTLT----LVTAT-------------------------- 153 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSCC---C---HHHHHHHHHTTCEE----EEEES--------------------------
T ss_pred cHHHHHHHHHhcCCCEEEEeCCCC---c---HHHHHHHHHCCCeE----EEECC--------------------------
Confidence 589999999999999999987753 1 35777777777653 33200
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
+ ++.++...++|||+|++++.
T Consensus 154 ------t---------~~~a~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 154 ------T---------PEEARAVEAAGADAVIAQGV 174 (369)
T ss_dssp ------S---------HHHHHHHHHTTCSEEEEECT
T ss_pred ------C---------HHHHHHHHHcCCCEEEEeCC
Confidence 0 33457788999999999885
No 20
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.05 E-value=0.54 Score=42.27 Aligned_cols=75 Identities=9% Similarity=0.051 Sum_probs=53.2
Q ss_pred hhHHHHHHHhhc--ccccEEEeeCccc--------ccCChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHH
Q 022296 40 HNVLEDIFESMG--QFVDGLKFSGGSH--------SLMPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFK 104 (299)
Q Consensus 40 ~~~l~DlLe~ag--~yID~lKfg~GTs--------~l~p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~~~~ 104 (299)
+..+.+..+.+- ...|++-+.+++- ...+.+.+.+.++.+++. ++++. ++ + ..+.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~-~---------~~~~ 179 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN-V---------TDIV 179 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-S---------SCSH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-h---------HHHH
Confidence 445566666555 5789998877643 334667788999988887 77544 33 2 2567
Q ss_pred HHHHHHHHcCCCEEEecCCc
Q 022296 105 EYVEDCKQVGFDTIELNVGS 124 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGt 124 (299)
++.+.+.+.|.|+|-++++.
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~ 199 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTL 199 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCE
T ss_pred HHHHHHHHcCCCEEEEeCCC
Confidence 78889999999999998743
No 21
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=93.89 E-value=0.32 Score=42.33 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCcccccccccccCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAFGAYVARA 174 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~s-evg~~~d~~~~~~~~~~ 174 (299)
.+++.++.++++||+.||+..+. ..++.++..++.+.+++.|+++.+ +....+.. ...+ .|+ .
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~h~~~~~~~~~-~~~--------~ 82 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWEN-AFCHSGYLINLAS-PKD--------D 82 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGG-EEEECCTTCCTTC-SSH--------H
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcce-eEEecccccccCC-CCH--------H
Confidence 57788999999999999997532 145667888899999999999622 22211110 1101 010 0
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCC-C-cc--cHHHHHHHHhccCCCceEEecC--
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHA-D-SL--RADIIAKVIGRLGLEKTMFEAT-- 248 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~-G-~~--r~d~i~~ii~~l~~eklifEAP-- 248 (299)
.+ + ..++.+ .+.++.+-+.||..|.+-.-...+.. . .+ -.+.+.++++...-=++.+|.-
T Consensus 83 ~r--~---------~~~~~~---~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~ 148 (287)
T 2x7v_A 83 IW--Q---------KSVELL---KKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQ 148 (287)
T ss_dssp HH--H---------HHHHHH---HHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCC
T ss_pred HH--H---------HHHHHH---HHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCC
Confidence 00 0 113445 44555566789999988543221110 0 00 0123344443311226778863
Q ss_pred -------CchhHHHHHHHhC--CCcccccCC
Q 022296 249 -------NPRTSEWFIRRYG--PKVNLFVDH 270 (299)
Q Consensus 249 -------~k~qQ~~fI~~fG--~~VNLgI~~ 270 (299)
+..+-..+++..+ |+|-+.+|.
T Consensus 149 ~~~~~~~~~~~~~~l~~~~~~~~~vg~~~D~ 179 (287)
T 2x7v_A 149 KGGNIGYKLEQLKKIRDLVDQRDRVAITYDT 179 (287)
T ss_dssp CTTEECSSHHHHHHHHHHCSCGGGEEEEEEH
T ss_pred CCCccCCCHHHHHHHHHhcCCCCCeEEEEEh
Confidence 3445678999998 455543443
No 22
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.84 E-value=0.59 Score=43.80 Aligned_cols=164 Identities=12% Similarity=0.116 Sum_probs=109.8
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHH
Q 022296 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKE 105 (299)
Q Consensus 26 lT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~ 105 (299)
+.++..|+.. -.+.++...++ -+|.+-+.. .+..-+..++-++.++++|+.+... +|.+....++.+.+
T Consensus 85 i~~l~~p~~~---~~~~i~~a~~a---Gvd~v~I~~---~~s~~~~~~~~i~~ak~~G~~v~~~--~~~a~~~~~e~~~~ 153 (345)
T 1nvm_A 85 IATLLLPGIG---SVHDLKNAYQA---GARVVRVAT---HCTEADVSKQHIEYARNLGMDTVGF--LMMSHMIPAEKLAE 153 (345)
T ss_dssp EEEEECBTTB---CHHHHHHHHHH---TCCEEEEEE---ETTCGGGGHHHHHHHHHHTCEEEEE--EESTTSSCHHHHHH
T ss_pred EEEEecCCcc---cHHHHHHHHhC---CcCEEEEEE---eccHHHHHHHHHHHHHHCCCEEEEE--EEeCCCCCHHHHHH
Confidence 4444456551 13344444443 577776652 2333367899999999999976543 12233444557888
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccC
Q 022296 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLAS 185 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~ 185 (299)
..+.+.++|.+.|=+.|-+--+.+++-.++|+.+++.- .....+++.+. .|
T Consensus 154 ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~-~~~~pi~~H~H-------n~--------------------- 204 (345)
T 1nvm_A 154 QGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVL-KPETQVGMHAH-------HN--------------------- 204 (345)
T ss_dssp HHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHS-CTTSEEEEECB-------CT---------------------
T ss_pred HHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhc-CCCceEEEEEC-------CC---------------------
Confidence 88889999999999999888888999999999999851 00123555321 11
Q ss_pred CCccchhhhhhhHHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHhccC
Q 022296 186 NPEIEVGVGINKSRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 186 ~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~~l~ 239 (299)
.... +..+...++|||+. |++- |+=...||...+.+-..+...|
T Consensus 205 -----~G~a---vAn~laA~~aGa~~--vd~tv~GlG~~aGN~~le~lv~~L~~~g 250 (345)
T 1nvm_A 205 -----LSLG---VANSIVAVEEGCDR--VDASLAGMGAGAGNAPLEVFIAVAERLG 250 (345)
T ss_dssp -----TSCH---HHHHHHHHHTTCCE--EEEBGGGCSSTTCBCBHHHHHHHHHHHT
T ss_pred -----ccHH---HHHHHHHHHcCCCE--EEecchhccCCccCcCHHHHHHHHHhcC
Confidence 2333 66778899999986 5765 8888899999887766666544
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.84 E-value=0.75 Score=42.37 Aligned_cols=79 Identities=8% Similarity=0.090 Sum_probs=50.1
Q ss_pred hhHHHHHHHhhcccccEEEeeCcccc------cCChhHHHHHHHHHHhC----------Ccee----cCCcHHHHHHHhC
Q 022296 40 HNVLEDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH----------DVYV----STGDWAEHLIRNG 99 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~------l~p~~~l~eKI~l~~~~----------gV~v----~~GtlfE~a~~qg 99 (299)
...+.+..+.+.++.|++=+-++|-. +...+.+.+.++-.++. ++++ .++ |- .
T Consensus 152 ~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~-~~-----~- 224 (336)
T 1f76_A 152 KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD-LS-----E- 224 (336)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC-CC-----H-
T ss_pred HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC-CC-----H-
Confidence 34455555555678899888776543 33445556666665543 5544 333 21 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCccc
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSLE 126 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (299)
+.+.++.+.+.+.|.|+|.+|+++..
T Consensus 225 -~~~~~~a~~l~~~Gvd~i~vsn~~~~ 250 (336)
T 1f76_A 225 -EELIQVADSLVRHNIDGVIATNTTLD 250 (336)
T ss_dssp -HHHHHHHHHHHHTTCSEEEECCCBCC
T ss_pred -HHHHHHHHHHHHcCCcEEEEeCCccc
Confidence 14677788999999999999998753
No 24
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.83 E-value=0.24 Score=42.92 Aligned_cols=101 Identities=10% Similarity=0.096 Sum_probs=74.9
Q ss_pred HHHHHHHhhccc-ccEEEeeCcc-----------cccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGS-----------HSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVE 108 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GT-----------s~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~ 108 (299)
.+++.++.+.+. .|.+=+.... ...++++.+++.-++++++|+.++.. .+.. ...+.+++.++
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~ 98 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA----EKSSDWEKMFK 98 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----SSTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----ccHHHHHHHHH
Confidence 356666665555 7888887543 12345667899999999999987653 3322 23457999999
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 022296 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
.|+.+|.+.|-+.-| .+.+.++.+.+++.|+++.-|-.
T Consensus 99 ~A~~lGa~~v~~~~~-----~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 99 FAKAMDLEFITCEPA-----LSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HHHHTTCSEEEECCC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHcCCCEEEecCC-----HHHHHHHHHHHHHhCCEEEEEeC
Confidence 999999999999865 46778999999999998766655
No 25
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=93.79 E-value=1.8 Score=39.48 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=74.4
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCcccccCChhHHHHHHHHHHhCCc----eecC-CcHHHHHHHhCCchHHHHHHHHHH
Q 022296 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (299)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~~-GtlfE~a~~qg~~~~~~yl~~~k~ 112 (299)
....+..+++.+.+ -+..+.|.+|--.+.+ .+.+.++.+++.+. .+.| |+++ +++++.+++
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGGEPll~~--~l~~li~~~~~~~~~~~i~i~TNG~ll-----------~~~~~~L~~ 117 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGGEPLMRR--DLDVLIAKLNQIDGIEDIGLTTNGLLL-----------KKHGQKLYD 117 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESSCGGGST--THHHHHHHHTTCTTCCEEEEEECSTTH-----------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccchh--hHHHHHHHHHhCCCCCeEEEEeCccch-----------HHHHHHHHH
Confidence 55677777776544 3788999999988887 57899999998853 3445 6543 346677888
Q ss_pred cCCCEEEecCCccc-----------CChhHHHHHHHHHHHcCCcccceeee
Q 022296 113 VGFDTIELNVGSLE-----------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 113 lGF~~IEISdGti~-----------i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.|++.|.||=-+.+ .+.+.-.+.|+.+++.|+.|...+-+
T Consensus 118 ~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv 168 (340)
T 1tv8_A 118 AGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVI 168 (340)
T ss_dssp HTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 99999999977652 15677888999999999865554444
No 26
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.57 E-value=0.55 Score=46.37 Aligned_cols=147 Identities=15% Similarity=0.148 Sum_probs=93.5
Q ss_pred HHHHHhhcccccEEEeeCcccc------cCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhC----C-chHHHHHHHH
Q 022296 44 EDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNG----P-SAFKEYVEDC 110 (299)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~------l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg----~-~~~~~yl~~~ 110 (299)
-+.|..+| +|.+-.|||.+. +.+ + =.+.++.+++. ++.+. .|.=..-..| | +-++.+++.+
T Consensus 36 a~~L~~~G--v~~IE~g~~atF~~~~r~~~~-d-~~e~l~~i~~~~~~~~l~--~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 36 AQQLDQIG--YWSLECWGGATFDSCIRFLGE-D-PWQRLRLLKQAMPNTPLQ--MLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp HHHHHTSC--CSEEEEEETTHHHHHHHTTCC-C-HHHHHHHHHHHCSSSCEE--EEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcC--CCEEEeCcCccccchhhccCC-C-HHHHHHHHHHhCCCCeEE--EEeccccccCcccccchhhHHHHHHH
Confidence 34556666 788999998762 233 2 23334444432 33221 1100000001 1 1368899999
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccc
Q 022296 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (299)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (299)
.+.|.+.|-|.+.+-++ +.-...|+.+++.|..|..-+.-- . +. + .+
T Consensus 110 ~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~~v~~~i~~~--~---~~-----------~---------------~~ 156 (464)
T 2nx9_A 110 VKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGAHAQGTLCYT--T---SP-----------V---------------HN 156 (464)
T ss_dssp HHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEEEEECC--C---CT-----------T---------------CC
T ss_pred HhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCCEEEEEEEee--e---CC-----------C---------------CC
Confidence 99999999999887776 455689999999998864333221 1 11 0 12
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
++.+ ++.+++..++||+.| .|+|..|-..+..+.++++.
T Consensus 157 ~e~~---~~~a~~l~~~Gad~I-----~l~DT~G~~~P~~v~~lv~~ 195 (464)
T 2nx9_A 157 LQTW---VDVAQQLAELGVDSI-----ALKDMAGILTPYAAEELVST 195 (464)
T ss_dssp HHHH---HHHHHHHHHTTCSEE-----EEEETTSCCCHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHCCCCEE-----EEcCCCCCcCHHHHHHHHHH
Confidence 6777 888999999999866 47888888888888777754
No 27
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.47 E-value=0.71 Score=42.94 Aligned_cols=144 Identities=13% Similarity=0.151 Sum_probs=97.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv------------------------- 100 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV------------------------- 100 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-------------------------
Confidence 67888999999999999876543 478999999999999883 0011111122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCcccH
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRA 228 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r~ 228 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .-++..
T Consensus 101 ---------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~ 168 (315)
T 3na8_A 101 ---------SDLTTAKT---VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSV 168 (315)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCH
T ss_pred ---------CCCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCH
Confidence 11125566 89999999999999999652 15663 236778
Q ss_pred HHHHHHHhccCCCce--EEec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 229 DIIAKVIGRLGLEKT--MFEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 229 d~i~~ii~~l~~ekl--ifEA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
+.+.+++.+.+ +| |=|+ .+-.+...+++..++++.+..-.++ +.+++|..|--|
T Consensus 169 ~~~~~L~a~~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~D~-~~l~~l~~G~~G 225 (315)
T 3na8_A 169 ELILRIVREVD--NVTMVKESTGDIQRMHKLRLLGEGRVPFYNGCNP-LALEAFVAGAKG 225 (315)
T ss_dssp HHHHHHHHHST--TEEEEEECSSCHHHHHHHHHHTTTCSCEEECCGG-GHHHHHHHTCSE
T ss_pred HHHHHHHhcCC--CEEEEECCCCCHHHHHHHHHHcCCCEEEEeCchH-HHHHHHHCCCCE
Confidence 88888855554 33 2244 4566777788888888777654444 458888866433
No 28
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=93.32 E-value=0.64 Score=42.57 Aligned_cols=116 Identities=19% Similarity=0.265 Sum_probs=80.4
Q ss_pred hHHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 102 AFKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 102 ~~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
-+++| +++|+..|-|+|=+-+. .++.++..++++.+++.|+.+..|+.-
T Consensus 122 iid~~qv~~A~~~GAD~VlLi~a--~l~~~~l~~l~~~a~~lGl~~lvev~t---------------------------- 171 (272)
T 3qja_A 122 VVQPYQIHEARAHGADMLLLIVA--ALEQSVLVSMLDRTESLGMTALVEVHT---------------------------- 171 (272)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCEEEEEESS----------------------------
T ss_pred ccCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHCCCcEEEEcCC----------------------------
Confidence 47787 99999999999988544 456778888999999998887654421
Q ss_pred hcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC-ceEEecCCc-hhHHHHHH
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATNP-RTSEWFIR 258 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e-klifEAP~k-~qQ~~fI~ 258 (299)
.+++ ++.+++||++|-+-.|.+-.- .+.-+.+.++...++.+ -++-|.=-. ..+..-+.
T Consensus 172 ----------~ee~-------~~A~~~Gad~IGv~~r~l~~~--~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~ 232 (272)
T 3qja_A 172 ----------EQEA-------DRALKAGAKVIGVNARDLMTL--DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYA 232 (272)
T ss_dssp ----------HHHH-------HHHHHHTCSEEEEESBCTTTC--CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHH
T ss_pred ----------HHHH-------HHHHHCCCCEEEECCCccccc--ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHH
Confidence 2233 666788999999988743211 23345577787777633 456665544 56777778
Q ss_pred HhCCCccc
Q 022296 259 RYGPKVNL 266 (299)
Q Consensus 259 ~fG~~VNL 266 (299)
..|.+-=+
T Consensus 233 ~~Gadgvl 240 (272)
T 3qja_A 233 GAGADAVL 240 (272)
T ss_dssp HTTCSEEE
T ss_pred HcCCCEEE
Confidence 88876444
No 29
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=93.25 E-value=0.25 Score=46.37 Aligned_cols=125 Identities=14% Similarity=0.141 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc--cc
Q 022296 71 FIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA--KP 148 (299)
Q Consensus 71 ~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v--~~ 148 (299)
.+++-++.++++|..|..|- |..-.-+|+.+-+..+.+.+.|.+.|-+.|-.--+.+.+-.++|+.+++. +.- .-
T Consensus 123 ~~~~~v~~a~~~g~~v~f~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~ 199 (325)
T 3eeg_A 123 MAVAAVKQAKKVVHEVEFFC--EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDN-VSNIDKA 199 (325)
T ss_dssp TTHHHHHHHHTTSSEEEEEE--ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHH-CSCGGGS
T ss_pred HHHHHHHHHHHCCCEEEEEc--cccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHh-CCCCCce
Confidence 45688999999999887652 22234455567778888889999999999999999999999999999884 110 01
Q ss_pred eeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc--ccccCCCcc
Q 022296 149 KFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--DVCKHADSL 226 (299)
Q Consensus 149 E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--gi~d~~G~~ 226 (299)
.+++-+. .| .... +..+...++|||+. |++- |+=...||.
T Consensus 200 ~i~~H~H-------nd--------------------------~GlA---~AN~laA~~aGa~~--vd~tv~GlGer~GN~ 241 (325)
T 3eeg_A 200 ILSAHCH-------ND--------------------------LGLA---TANSLAALQNGARQ--VECTINGIGERAGNT 241 (325)
T ss_dssp EEEECBC-------CT--------------------------TSCH---HHHHHHHHHHTCCE--EEEBGGGCCSTTCCC
T ss_pred EEEEEeC-------CC--------------------------CCHH---HHHHHHHHHhCCCE--EEEecccccccccch
Confidence 3444321 11 2333 66678899999997 4664 888899999
Q ss_pred cHHHHHHHHh
Q 022296 227 RADIIAKVIG 236 (299)
Q Consensus 227 r~d~i~~ii~ 236 (299)
-.+.+-..+.
T Consensus 242 ~lE~vv~~L~ 251 (325)
T 3eeg_A 242 ALEEVVMAME 251 (325)
T ss_dssp BHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9887666554
No 30
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=93.04 E-value=1.4 Score=41.92 Aligned_cols=77 Identities=18% Similarity=0.216 Sum_probs=53.0
Q ss_pred HHHHHH---HhhcccccEEEeeCccc------ccCChhHHHHHHHHHHh--------CCc----eecCC-cHHHHHHHhC
Q 022296 42 VLEDIF---ESMGQFVDGLKFSGGSH------SLMPKPFIEEVVKRAHQ--------HDV----YVSTG-DWAEHLIRNG 99 (299)
Q Consensus 42 ~l~DlL---e~ag~yID~lKfg~GTs------~l~p~~~l~eKI~l~~~--------~gV----~v~~G-tlfE~a~~qg 99 (299)
..+|+. +..++|.|++=+=.||- .+..++.+.+.++..++ .++ ++.|+ +.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~-------- 233 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS-------- 233 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH--------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH--------
Confidence 455555 45667788887766542 45667778888777654 344 44454 22
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccC
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i 127 (299)
+.+.++.+.|.+.|.|.|-+++.+...
T Consensus 234 -~~~~~ia~~~~~aGadgi~v~ntt~~r 260 (367)
T 3zwt_A 234 -QDKEDIASVVKELGIDGLIVTNTTVSR 260 (367)
T ss_dssp -HHHHHHHHHHHHHTCCEEEECCCBSCC
T ss_pred -HHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 257788899999999999999998654
No 31
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=93.03 E-value=0.98 Score=40.15 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCC-
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA- 174 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~- 174 (299)
.+++.++.++++||++||+..+. ..++.++..++-+.+++.|+++.+ +-.+. .+.. .+|.
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~h~~~-~~nl---------~s~d~ 85 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIV---VHAPY-IINI---------GNTTN 85 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEE---EECCT-TCCT---------TCSSC
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEE---Eeccc-cccC---------CCCCc
Confidence 58899999999999999994322 134467777888889999995322 21111 0000 0010
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh---ccC----CCceEEec
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG---RLG----LEKTMFEA 247 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~---~l~----~eklifEA 247 (299)
+-..+ .+++.+ .+.++.+-+.||..|++-.-... +.-+.+..+.+++ .+. -=+|.+|.
T Consensus 86 ~~~r~---------~~~~~~---~~~i~~A~~lGa~~vv~h~g~~~---~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn 150 (303)
T 3aal_A 86 LDTFS---------LGVDFL---RAEIERTEAIGAKQLVLHPGAHV---GAGVEAGLRQIIRGLNEVLTREQNVQIALET 150 (303)
T ss_dssp HHHHH---------HHHHHH---HHHHHHHHHHTCSEEEECCEECT---TSCHHHHHHHHHHHHHHHCCSSCSCEEEEEC
T ss_pred HHHHH---------HHHHHH---HHHHHHHHHcCCCEEEECCCcCC---CCCHHHHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 00000 124555 55566667789999988653221 1122222222222 221 13788887
Q ss_pred C---------CchhHHHHHHHhC--CCcccccCCCCc
Q 022296 248 T---------NPRTSEWFIRRYG--PKVNLFVDHSQV 273 (299)
Q Consensus 248 P---------~k~qQ~~fI~~fG--~~VNLgI~~~eV 273 (299)
- ...+-..+|+..+ |+|-+.+|...+
T Consensus 151 ~~~~~~~~~~t~~~~~~li~~v~~~~~vg~~lD~~H~ 187 (303)
T 3aal_A 151 MAGKGSECGRTFEELAYIIDGVAYNDKLSVCFDTCHT 187 (303)
T ss_dssp CCCCTTEECSSHHHHHHHHHHCTTGGGEEEEEEHHHH
T ss_pred CCCCCCccCCCHHHHHHHHHhcCCCCCEEEEEEccCH
Confidence 5 4456677999998 456554555443
No 32
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.99 E-value=0.71 Score=42.84 Aligned_cols=157 Identities=10% Similarity=0.082 Sum_probs=104.3
Q ss_pred hhHHHHHHHhhcccccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceec------CCcHHHHHHHhCCch
Q 022296 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSA 102 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~------~GtlfE~a~~qg~~~ 102 (299)
...++..+++ =+|.+-+...+|-.+.+ +.+++-|+.++++|+.|. .|--++- .-+++.
T Consensus 84 ~~~i~~a~~~---g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~~~~ 158 (307)
T 1ydo_A 84 QRGLENALEG---GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVPIEQ 158 (307)
T ss_dssp HHHHHHHHHH---TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHH
T ss_pred HHhHHHHHhC---CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCCHHH
Confidence 3455555654 36777766666544221 345788999999999884 2322221 223446
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
+.++.+.+.++|.+.|=|.|-.--+.+++-.++|+.+++. +. ...+++-+. .|
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~-~~~l~~H~H-------nd------------------ 211 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR-FP-ANQIALHFH-------DT------------------ 211 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT-SC-GGGEEEECB-------GG------------------
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh-CC-CCeEEEEEC-------CC------------------
Confidence 7777788899999999999988889999999999999884 21 113555321 11
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc------CCCcccHHHHHHHHhccC
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK------HADSLRADIIAKVIGRLG 239 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d------~~G~~r~d~i~~ii~~l~ 239 (299)
.... +..+...++|||+.|=.=--|+=. ..||...+.+-..+...|
T Consensus 212 --------~Gla---~AN~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g 263 (307)
T 1ydo_A 212 --------RGTA---LANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMD 263 (307)
T ss_dssp --------GSCH---HHHHHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTT
T ss_pred --------CchH---HHHHHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcC
Confidence 2333 666788999999865333347766 789999887776665544
No 33
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=92.74 E-value=1.6 Score=43.07 Aligned_cols=149 Identities=11% Similarity=0.169 Sum_probs=104.9
Q ss_pred HHHHHhh-cccccEEEeeCcccccCChhHHHHHHHHHHhCCceec-----CCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 44 EDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 44 ~DlLe~a-g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
+..++.+ ..=+|.+-+-..++-+ +.+++-|+.++++|..|. ..+. ..+++.+-+..+.+.+.|.+.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~~-----~~~~e~~~~~a~~l~~~Gad~ 174 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV---RNMQQALQAVKKMGAHAQGTLCYTTSP-----VHNLQTWVDVAQQLAELGVDS 174 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCCT-----TCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH---HHHHHHHHHHHHCCCEEEEEEEeeeCC-----CCCHHHHHHHHHHHHHCCCCE
Confidence 3334333 3348888877665555 579999999999999762 2221 124446667777888999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhh
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINK 197 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
|=|.|-.--+.+.+-.++|+.+++. + .-.+++.+.. | ....
T Consensus 175 I~l~DT~G~~~P~~v~~lv~~l~~~-~--~~~i~~H~Hn-------d--------------------------~GlA--- 215 (464)
T 2nx9_A 175 IALKDMAGILTPYAAEELVSTLKKQ-V--DVELHLHCHS-------T--------------------------AGLA--- 215 (464)
T ss_dssp EEEEETTSCCCHHHHHHHHHHHHHH-C--CSCEEEEECC-------T--------------------------TSCH---
T ss_pred EEEcCCCCCcCHHHHHHHHHHHHHh-c--CCeEEEEECC-------C--------------------------CChH---
Confidence 9999988888899989999999885 2 2235553221 1 2223
Q ss_pred HHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHhccCCC
Q 022296 198 SRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
+..+...++|||+.| ++- |+=...||...+.+-..+...|.+
T Consensus 216 vAN~laAv~AGa~~V--D~ti~g~gertGN~~lE~lv~~L~~~g~~ 259 (464)
T 2nx9_A 216 DMTLLKAIEAGVDRV--DTAISSMSGTYGHPATESLVATLQGTGYD 259 (464)
T ss_dssp HHHHHHHHHTTCSEE--EEBCGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred HHHHHHHHHhCCCEE--EEeccccCCCCcCHHHHHHHHHHHhcCCC
Confidence 566688999999955 664 888889999988887777766543
No 34
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=92.65 E-value=0.92 Score=41.47 Aligned_cols=105 Identities=10% Similarity=0.123 Sum_probs=75.9
Q ss_pred chhHHHHHHHhhccc-ccEEEeeCccc-ccCChhHHH--------------HHHHHHHhCC--ceecCCcHHHHHHHhCC
Q 022296 39 SHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE--------------EVVKRAHQHD--VYVSTGDWAEHLIRNGP 100 (299)
Q Consensus 39 g~~~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~--------------eKI~l~~~~g--V~v~~GtlfE~a~~qg~ 100 (299)
.+..+.+++...-+- .|++=+|.=-| .+.+-..++ .-.++.++.- +++..=|++...+..|
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G- 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYG- 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhh-
Confidence 667888888877654 89999997443 122222333 3344444432 3333337888888886
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
+++|++.|++.|.|.+=|-| +|.|+..++.+.++++|+...+-+
T Consensus 105 --~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 105 --LEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp --HHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHTTCEECEEE
T ss_pred --HHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHcCCeEEEEe
Confidence 89999999999999999987 888899999999999988865544
No 35
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=92.56 E-value=1.3 Score=38.34 Aligned_cols=128 Identities=11% Similarity=0.131 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHcCCcccceeeeecCCC-CCCCcccccccccccCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKS-DIPSDRDRAFGAYVARA 174 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~s-evg~~~d~~~~~~~~~~ 174 (299)
.+++.++.++++||++||+.... ..++.++..++-+.+++.|+.. +.+-.+.. ...+ | |.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~---~~~h~~~~~~l~s--~--------~~ 81 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLP---AVIHASYLVNLGA--E--------GE 81 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCC---EEEECCTTCCTTC--S--------ST
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCce---EEEecCcccCCCC--C--------HH
Confidence 58889999999999999995532 2455778888889999999932 22311110 1111 1 11
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc----cCCCceEEecC--
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR----LGLEKTMFEAT-- 248 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~----l~~eklifEAP-- 248 (299)
.+ ..+++.+ .+.++.+-+.||..|.+-.-.. .. +.-.+-+.++++. .|+ +|.+|.-
T Consensus 82 ~r-----------~~~~~~~---~~~i~~a~~lGa~~vv~h~g~~-~~--~~~~~~l~~l~~~a~~~~gv-~l~lEn~~~ 143 (270)
T 3aam_A 82 LW-----------EKSVASL---ADDLEKAALLGVEYVVVHPGSG-RP--ERVKEGALKALRLAGVRSRP-VLLVENTAG 143 (270)
T ss_dssp HH-----------HHHHHHH---HHHHHHHHHHTCCEEEECCCBS-CH--HHHHHHHHHHHHHHTCCSSS-EEEEECCCC
T ss_pred HH-----------HHHHHHH---HHHHHHHHHcCCCEEEECCCCC-CH--HHHHHHHHHHHHhhcccCCC-EEEEecCCC
Confidence 01 1125556 5566666678999998865322 11 1122333444433 343 7888875
Q ss_pred -------CchhHHHHHHHh
Q 022296 249 -------NPRTSEWFIRRY 260 (299)
Q Consensus 249 -------~k~qQ~~fI~~f 260 (299)
...+-..+++..
T Consensus 144 ~~~~~~~~~~~~~~l~~~v 162 (270)
T 3aam_A 144 GGEKVGARFEELAWLVADT 162 (270)
T ss_dssp CTTBSCCSHHHHHHHHTTS
T ss_pred CCCccCCCHHHHHHHHHhC
Confidence 344556677776
No 36
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=92.50 E-value=2 Score=39.06 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=73.3
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCcccccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
.+..+.+.++.+-+ -+..+-|.+|...+++.+.+.+.++.+++.++.+.. .+. .-++.++.+++.|++
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~----------l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE----------WPREYYEKWKEAGAD 154 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC----------CCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC----------CCHHHHHHHHHhCCC
Confidence 34455555544333 277888999996677767899999999999887763 221 236778889999999
Q ss_pred EEEecCCcc----------cCChhHHHHHHHHHHHcCCcccc
Q 022296 117 TIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 117 ~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+-+|--+. .-+.+++.+.|+.+++.|+.+.+
T Consensus 155 ~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~ 196 (348)
T 3iix_A 155 RYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGA 196 (348)
T ss_dssp EEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeecc
Confidence 998875544 23778999999999999987443
No 37
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=92.43 E-value=0.7 Score=40.67 Aligned_cols=45 Identities=18% Similarity=0.190 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+..... ...+..++.+.+++.|+++.+
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~~l~~~gl~~~~ 86 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDP--SIVDWNEVKILSEELNLPICA 86 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCG--GGSCHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCc--chhhHHHHHHHHHHcCCeEEE
Confidence 688999999999999999986532 235566788888999998644
No 38
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.37 E-value=0.092 Score=49.43 Aligned_cols=121 Identities=19% Similarity=0.331 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHHH
Q 022296 71 FIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLVK 140 (299)
Q Consensus 71 ~l~eKI~l~~~~-----gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~~ 140 (299)
.+.|.|+-.++. +|++++..|.+--+. .+...++.+.+.+.|+|+|+||+|... .++.-..++++.++
T Consensus 196 ~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~--~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik 273 (340)
T 3gr7_A 196 FLGEVIDAVREVWDGPLFVRISASDYHPDGLT--AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIR 273 (340)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC--GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCC--HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHH
Confidence 455666666553 456777655432111 125667788888899999999988642 12333456777777
Q ss_pred HcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEecccc
Q 022296 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDV 219 (299)
Q Consensus 141 ~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi 219 (299)
+. +. +|=++. ++ ..+ .+.+++.|++| ||.|++ +|.+
T Consensus 274 ~~-~~-iPVi~~----------Gg---------------------I~s---------~e~a~~~L~~G~aD~V~i-GR~~ 310 (340)
T 3gr7_A 274 RE-AD-IPTGAV----------GL---------------------ITS---------GWQAEEILQNGRADLVFL-GREL 310 (340)
T ss_dssp HH-TT-CCEEEE----------SS---------------------CCC---------HHHHHHHHHTTSCSEEEE-CHHH
T ss_pred HH-cC-CcEEee----------CC---------------------CCC---------HHHHHHHHHCCCeeEEEe-cHHH
Confidence 73 00 121111 00 011 45568899999 999998 5654
Q ss_pred ccCCCcccHHHHHHHHhccCCC
Q 022296 220 CKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 220 ~d~~G~~r~d~i~~ii~~l~~e 241 (299)
.. +.+++.++.+.++.+
T Consensus 311 la-----nPdl~~ki~~~l~~~ 327 (340)
T 3gr7_A 311 LR-----NPYWPYAAARELGAK 327 (340)
T ss_dssp HH-----CTTHHHHHHHHTTCC
T ss_pred Hh-----CchHHHHHHHHCCCC
Confidence 43 257889999888854
No 39
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=92.33 E-value=0.58 Score=41.00 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+....+ .++.++..++-+.+++.|+++..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 689999999999999999997643 56788888999999999999765
No 40
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.21 E-value=2.1 Score=39.82 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv------------------------- 98 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA------------------------- 98 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC-------------------------
Confidence 6788899999999999966543 3489999999999999883 0011111122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCcccH
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRA 228 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r~ 228 (299)
...+..+. |+.++..-++|||-|++=.- -||+. .-++..
T Consensus 99 ---------g~~st~~a---i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~ 166 (315)
T 3si9_A 99 ---------GSNSTSEA---VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAV 166 (315)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCH
T ss_pred ---------CCCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCH
Confidence 11125566 89999999999999998662 15653 346778
Q ss_pred HHHHHHHhccC-CCceEEecCCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 229 DIIAKVIGRLG-LEKTMFEATNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 229 d~i~~ii~~l~-~eklifEAP~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
+.+.+++++.| +-=+=....+-.+...+++..++++.+.-- +|-+.+++|..|--|
T Consensus 167 ~~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~~~~f~v~~G-~d~~~l~~l~~G~~G 223 (315)
T 3si9_A 167 ETMRDLCRDFKNIIGVKDATGKIERASEQREKCGKDFVQLSG-DDCTALGFNAHGGVG 223 (315)
T ss_dssp HHHHHHHHHCTTEEEEEECSCCTHHHHHHHHHHCSSSEEEES-CGGGHHHHHHTTCCE
T ss_pred HHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHHcCCCeEEEec-CHHHHHHHHHcCCCE
Confidence 88888886555 211112335667778888889888777533 345668888866444
No 41
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=92.11 E-value=1.8 Score=38.99 Aligned_cols=112 Identities=16% Similarity=0.212 Sum_probs=73.4
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhccc-ccEEEeeCccc-ccCChhHHH-----------------HHHHHHHhC--Cc
Q 022296 26 VTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DV 84 (299)
Q Consensus 26 lT~V~DkGl~~~~g~~~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV 84 (299)
+++|. +|++ .+....++++..-+. +|.+.+|.=-+ .+++-..++ +-++..+++ ++
T Consensus 20 i~~i~-~g~p---~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 20 VSYLM-VGYP---DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEE-TTSS---CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred EEEec-CCCC---ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 44444 7773 555666666666666 99999986332 122222333 334444544 45
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 85 ~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
++..=|..-.++..| +++|++.|++.|+|.+=+. ++|.++-.++++.++++|+.+.+
T Consensus 96 Pi~~m~y~n~v~~~g---~~~f~~~~~~aG~dgvii~----dl~~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 96 PFLLMTYYNPIFRIG---LEKFCRLSREKGIDGFIVP----DLPPEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp CEEEECCHHHHHHHC---HHHHHHHHHHTTCCEEECT----TCCHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEecCcHHHHhh---HHHHHHHHHHcCCCEEEEC----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 443213445555554 7999999999999988886 56778889999999999988654
No 42
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.06 E-value=0.5 Score=42.11 Aligned_cols=84 Identities=14% Similarity=0.189 Sum_probs=58.2
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
++++.+.|.|.|-+.. +.-.+++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~aGad~I~l~~-~~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (229)
T 3q58_A 94 VDALAQAGADIIAFDA-SFRSRPVDIDSLLTRIRLHGLLAMADCST---------------------------------- 138 (229)
T ss_dssp HHHHHHHTCSEEEEEC-CSSCCSSCHHHHHHHHHHTTCEEEEECSS----------------------------------
T ss_pred HHHHHHcCCCEEEECc-cccCChHHHHHHHHHHHHCCCEEEEecCC----------------------------------
Confidence 6778999999997654 44445577789999999987776543211
Q ss_pred CccchhhhhhhHHHHHHHHHccCcEEEEeccccccC--CCcccHHHHHHHHh
Q 022296 187 PEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIG 236 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~--~G~~r~d~i~~ii~ 236 (299)
.+.+++..++||++|.+-.+|.... ......+++.++.+
T Consensus 139 -----------~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~ 179 (229)
T 3q58_A 139 -----------VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSH 179 (229)
T ss_dssp -----------HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHT
T ss_pred -----------HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHH
Confidence 3445888999999998877775442 22334566777665
No 43
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=92.03 E-value=0.74 Score=41.95 Aligned_cols=108 Identities=12% Similarity=0.147 Sum_probs=79.7
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
+.+++..|-|+|=+.-. .++.++..++++.+++.|+.++-|+.-
T Consensus 116 i~ea~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~---------------------------------- 159 (251)
T 1i4n_A 116 VKLASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHS---------------------------------- 159 (251)
T ss_dssp HHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 44599999999999877 467789999999999999998887753
Q ss_pred CccchhhhhhhHHHHHHHHHc-cCcEEEEeccccccCCCcccHHHHHHHHhccCCCc-eEEecCCc-hhHHHHHHHhCCC
Q 022296 187 PEIEVGVGINKSRRAERCLEA-GADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK-TMFEATNP-RTSEWFIRRYGPK 263 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeA-GA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ek-lifEAP~k-~qQ~~fI~~fG~~ 263 (299)
.+.+++.+++ |++.|-|+-|++-.- .+.-+...+++..++.+. +|-|+=-. ..+...+... .+
T Consensus 160 -----------~eE~~~A~~l~g~~iIGinnr~l~t~--~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~ 225 (251)
T 1i4n_A 160 -----------REDLEKVFSVIRPKIIGINTRDLDTF--EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VN 225 (251)
T ss_dssp -----------HHHHHHHHTTCCCSEEEEECBCTTTC--CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-CS
T ss_pred -----------HHHHHHHHhcCCCCEEEEeCcccccC--CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-CC
Confidence 2334888999 999999999987442 344556677888887654 55577643 4555555555 44
Q ss_pred c
Q 022296 264 V 264 (299)
Q Consensus 264 V 264 (299)
.
T Consensus 226 a 226 (251)
T 1i4n_A 226 A 226 (251)
T ss_dssp E
T ss_pred E
Confidence 3
No 44
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=91.93 E-value=0.67 Score=40.21 Aligned_cols=45 Identities=4% Similarity=0.058 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHHHHHHcCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVRLVKSAGLKA 146 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------~i~~~~r~~lI~~~~~~G~~v 146 (299)
.+++.++.++++||++||+..... .++.++..++.+.+++.|+++
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 588999999999999999953322 356678888999999999985
No 45
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=91.88 E-value=0.75 Score=42.21 Aligned_cols=100 Identities=8% Similarity=0.093 Sum_probs=69.6
Q ss_pred HHHHHHHHHcCCCEEEecCCccc--------CChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLE--------IPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~--------i~~~~----r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~ 171 (299)
.+.++.+.+.|++.|-|.+++-+ ++.++ -.+.|+.+++.|..|-.+++.-++. .++
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~-----e~~------- 153 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGC-----PYD------- 153 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCB-----TTT-------
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeC-----CcC-------
Confidence 46788888899999999887744 34333 3577899999999987777663321 111
Q ss_pred cCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 172 ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
. ..+++.+ ++.++...++||+.|-+ .|..|-..+..+.++++.+
T Consensus 154 ------~---------~~~~~~~---~~~~~~~~~~G~d~i~l-----~DT~G~~~P~~~~~lv~~l 197 (302)
T 2ftp_A 154 ------G---------DVDPRQV---AWVARELQQMGCYEVSL-----GDTIGVGTAGATRRLIEAV 197 (302)
T ss_dssp ------B---------CCCHHHH---HHHHHHHHHTTCSEEEE-----EESSSCCCHHHHHHHHHHH
T ss_pred ------C---------CCCHHHH---HHHHHHHHHcCCCEEEE-----eCCCCCcCHHHHHHHHHHH
Confidence 0 1237788 88899999999998754 4666666677666666544
No 46
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=91.85 E-value=1.4 Score=39.10 Aligned_cols=136 Identities=14% Similarity=0.123 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cC--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-EI--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i--~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+++.++.++++||++||+..... .+ +..+..++-+.+++.|+++.. ++. ..+... .+ + ...
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~-~~~---~~~~~~-~~--------~--~~~ 101 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE-VEY---ITQWGT-AE--------D--RTA 101 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE-EEC---BCCCSS-TT--------T--CCH
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe-ehh---hhcccc-CC--------h--HHH
Confidence 789999999999999999975321 11 234556788888899998655 222 111111 01 0 000
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcc--cHHHHHHHHhc-cCCCceEEec------CC
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSL--RADIIAKVIGR-LGLEKTMFEA------TN 249 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~--r~d~i~~ii~~-l~~eklifEA------P~ 249 (299)
+ .++.+ .+.++..-+.||..|.+ +- ... -.+ -.+.+.++++. .|+ ++.+|. ..
T Consensus 102 ~----------~~~~~---~~~i~~A~~lGa~~v~~-g~--~~~-~~~~~~~~~l~~l~~~a~Gv-~l~lE~~~~~~~~~ 163 (296)
T 2g0w_A 102 E----------QQKKE---QTTFHMARLFGVKHINC-GL--LEK-IPEEQIIVALGELCDRAEEL-IIGLEFMPYSGVAD 163 (296)
T ss_dssp H----------HHHHH---HHHHHHHHHHTCCEEEE-CC--CSC-CCHHHHHHHHHHHHHHHTTS-EEEEECCTTSSSCS
T ss_pred H----------HHHHH---HHHHHHHHHcCCCEEEE-cC--CCC-CCHHHHHHHHHHHHHHhcCC-EEEEEecCCCCCCC
Confidence 0 02334 34455556779999988 32 211 111 12223333322 343 677785 34
Q ss_pred chhHHHHHHHhCC-CcccccCC
Q 022296 250 PRTSEWFIRRYGP-KVNLFVDH 270 (299)
Q Consensus 250 k~qQ~~fI~~fG~-~VNLgI~~ 270 (299)
..+-..+++..|+ +|-+.+|.
T Consensus 164 ~~~~~~l~~~v~~~~vgl~~D~ 185 (296)
T 2g0w_A 164 LQAAWRVAEACGRDNAQLICDT 185 (296)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEH
T ss_pred HHHHHHHHHHhCCCCeEEEEeh
Confidence 5566778999985 44443443
No 47
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.82 E-value=1.8 Score=39.57 Aligned_cols=103 Identities=17% Similarity=0.309 Sum_probs=67.6
Q ss_pred chhHHHHHHHhhc-ccccEEEeeCcc-cccCChhHH-----------------HHHHHHHHhC--CceecCCcHHHHHHH
Q 022296 39 SHNVLEDIFESMG-QFVDGLKFSGGS-HSLMPKPFI-----------------EEVVKRAHQH--DVYVSTGDWAEHLIR 97 (299)
Q Consensus 39 g~~~l~DlLe~ag-~yID~lKfg~GT-s~l~p~~~l-----------------~eKI~l~~~~--gV~v~~GtlfE~a~~ 97 (299)
.+..+.+++...- .=+|++=+|.=- -.+++-..+ -+.++-.|+. ++++..=|++.-.+.
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 4456666655544 348999999211 112222222 2334444443 344332267777777
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+.+.+
T Consensus 110 ~g---~e~f~~~~~~aGvdgvii~----Dlp~ee~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 110 NG---IDEFYTKAQAAGVDSVLIA----DVPVEESAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp HC---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEC
T ss_pred hh---HHHHHHHHHHcCCCEEEeC----CCCHhhHHHHHHHHHHcCCeEEE
Confidence 76 8999999999999999996 57778888999999999888554
No 48
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.81 E-value=2 Score=39.18 Aligned_cols=143 Identities=15% Similarity=0.097 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=.|+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv------------------------ 76 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGA------------------------ 76 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec------------------------
Confidence 6888999999999999987653 3489999999999999873 1 11111222
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc--------c-----------------cccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--------D-----------------VCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--------g-----------------i~d~---~G-~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- | +|+. .| ++.
T Consensus 77 ----------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~ 143 (292)
T 2vc6_A 77 ----------GSNSTAEA---IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIH 143 (292)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCC
T ss_pred ----------CCccHHHH---HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCC
Confidence 11124556 89999999999999998652 1 5653 23 677
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.+++++.+ +|+- |+ .+-.+...+++..++++.+.-- +|-+.+++|..|--|
T Consensus 144 ~~~~~~La~~~p--nIvgiK~s~gd~~~~~~~~~~~~~~f~v~~G-~d~~~~~~l~~G~~G 201 (292)
T 2vc6_A 144 VETLARIFEDCP--NVKGVXDATGNLLRPSLERMACGEDFNLLTG-EDGTALGYMAHGGHG 201 (292)
T ss_dssp HHHHHHHHHHCT--TEEEEEECSCCTHHHHHHHHHSCTTSEEEES-CGGGHHHHHHTTCCE
T ss_pred HHHHHHHHhhCC--CEEEEecCCCCHHHHHHHHHHcCCCEEEEEC-chHHHHHHHHcCCCE
Confidence 888888875343 4432 44 4667777888888877776433 455668888876544
No 49
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=91.79 E-value=1.2 Score=43.62 Aligned_cols=146 Identities=16% Similarity=0.218 Sum_probs=98.2
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHH
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVED 109 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~ 109 (299)
..++..+++- +|.+-+-..||-.+.+ +.+.+-++.++++|+.|..+ +|-++..+++.+-+.++.
T Consensus 114 ~di~~A~~aG---~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~--~eda~r~d~~~~~~v~~~ 188 (423)
T 3ivs_A 114 DDARVAVETG---VDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFS--SEDSFRSDLVDLLSLYKA 188 (423)
T ss_dssp HHHHHHHHTT---CSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEE--EESGGGSCHHHHHHHHHH
T ss_pred hhHHHHHHcC---CCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEE--EccCcCCCHHHHHHHHHH
Confidence 3455555543 5666666666654321 34556789999999988764 233344555566777788
Q ss_pred HHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCcc
Q 022296 110 CKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEI 189 (299)
Q Consensus 110 ~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
+.+.|.+.|-+.|-.--+.+.+-.++|+.+++. +...+++.+.. |
T Consensus 189 ~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~---~~~~i~~H~Hn-------d------------------------- 233 (423)
T 3ivs_A 189 VDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV---VSCDIECHFHN-------D------------------------- 233 (423)
T ss_dssp HHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH---CSSEEEEEEBC-------T-------------------------
T ss_pred HHHhCCCccccCCccCcCCHHHHHHHHHHHHhh---cCCeEEEEECC-------C-------------------------
Confidence 889999999999999888899999999999874 12245553221 1
Q ss_pred chhhhhhhHHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHH
Q 022296 190 EVGVGINKSRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIA 232 (299)
Q Consensus 190 ~~~~~~~~i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~ 232 (299)
.... +..+...++|||+ .||+- |+=+..||...+.+-
T Consensus 234 -~GlA---vAN~laAv~aGa~--~vd~ti~GlGERaGNa~Le~vv 272 (423)
T 3ivs_A 234 -TGMA---IANAYCALEAGAT--HIDTSILGIGERNGITPLGALL 272 (423)
T ss_dssp -TSCH---HHHHHHHHHTTCC--EEEEBGGGCSSTTCBCBHHHHH
T ss_pred -CchH---HHHHHHHHHhCCC--EEEEecccccCcccchhHHHHH
Confidence 2233 6667889999999 55665 999999998866553
No 50
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.77 E-value=2 Score=40.35 Aligned_cols=184 Identities=15% Similarity=0.142 Sum_probs=110.5
Q ss_pred EEeeCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH
Q 022296 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL 132 (299)
Q Consensus 57 lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r 132 (299)
|-++-|+...++.+.+...+..+.+++|+|+. |..+ +.+..|-+.||+.|=+.--. +|.++=
T Consensus 46 lq~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~------------e~~~~ai~~GFtSVMiDgS~--~p~eEN 111 (305)
T 1rvg_A 46 LALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSY------------ESVLRALRAGFTSVMIDKSH--EDFETN 111 (305)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSH------------HHHHHHHHTTCSEEEECCTT--SCHHHH
T ss_pred EECChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCH------------HHHHHHHHcCCCeeeeCCCC--CCHHHH
Confidence 44444443333334444444444346666654 3333 44556778999999886554 454443
Q ss_pred ----HHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHH-c
Q 022296 133 ----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLE-A 207 (299)
Q Consensus 133 ----~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLe-A 207 (299)
.++++.+...|.-|--|+|.=-+ .+|. ..... .+..+| +|++. +++.+ -
T Consensus 112 i~~Tk~vv~~ah~~gvsVEaELG~vgg------~Ed~---~~~~~--~~~~yT--------~Peea-------~~Fv~~T 165 (305)
T 1rvg_A 112 VRETRRVVEAAHAVGVTVEAELGRLAG------IEEH---VAVDE--KDALLT--------NPEEA-------RIFMERT 165 (305)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCCCC------SCC-----------CCTTCC--------CHHHH-------HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccC------ccCC---ccccc--cccccC--------CHHHH-------HHHHHHH
Confidence 46788888899999999998311 1220 00000 001111 25555 55553 6
Q ss_pred cCcEEEEec---ccccc--CCCcccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCCccc--ccCCCCchhhhhh
Q 022296 208 GADMIMIDS---DDVCK--HADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPKVNL--FVDHSQVMDLECL 279 (299)
Q Consensus 208 GA~~VIiEa---rgi~d--~~G~~r~d~i~~ii~~l~~eklifEAP-~k~qQ~~fI~~fG~~VNL--gI~~~eVi~LE~L 279 (299)
|.|.+=+== -|.|. .+-.++.|.+++|-+.++.-=++==+. -|+..+..|+.||-++.= ||+.+|+- +|.
T Consensus 166 gvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~--~ai 243 (305)
T 1rvg_A 166 GADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIK--KAI 243 (305)
T ss_dssp CCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHH--HHH
T ss_pred CCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHH--HHH
Confidence 988665432 28998 556899999999999888544444443 477788999999999876 47666653 244
Q ss_pred hcc
Q 022296 280 RGR 282 (299)
Q Consensus 280 R~~ 282 (299)
+.|
T Consensus 244 ~~G 246 (305)
T 1rvg_A 244 SLG 246 (305)
T ss_dssp HTT
T ss_pred HCC
Confidence 444
No 51
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=91.53 E-value=1.1 Score=41.88 Aligned_cols=113 Identities=14% Similarity=0.194 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--------------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG--------------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--------------ti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~ 167 (299)
..+.|++.+|+.||..| ++== --.|..++-.++|+++++.||...+ =+ .
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~--~v---~----------- 171 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTP--YV---F----------- 171 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECC--EE---C-----------
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEE--ec---C-----------
Confidence 58999999999999999 8776 3457778888999999998887433 11 0
Q ss_pred cccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc----ccccCCCcccH----HHHHHHH---h
Q 022296 168 GAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD----DVCKHADSLRA----DIIAKVI---G 236 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar----gi~d~~G~~r~----d~i~~ii---~ 236 (299)
+ .++++.-.+||||.|.+|-- |+....-.+.. +.++++. .
T Consensus 172 --------------------~---------~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~ 222 (286)
T 2p10_A 172 --------------------S---------PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAAR 222 (286)
T ss_dssp --------------------S---------HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHH
T ss_pred --------------------C---------HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHH
Confidence 0 45568889999999999986 55444323222 2444444 4
Q ss_pred ccCCC-ceEEec-CC-chhHHHHHHHh
Q 022296 237 RLGLE-KTMFEA-TN-PRTSEWFIRRY 260 (299)
Q Consensus 237 ~l~~e-klifEA-P~-k~qQ~~fI~~f 260 (299)
++.++ .+|.-| |- ..+-+.++.+.
T Consensus 223 ~vnpdvivLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 223 TIRDDIIILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp HHCSCCEEEEESTTCCSHHHHHHHHHH
T ss_pred HhCCCcEEEecCCCCCCHHHHHHHHhc
Confidence 45555 456666 53 23345555555
No 52
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=91.45 E-value=2.2 Score=39.57 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=70.0
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCcc--cccCChhHHHHHHHHHHhCCceec--CCcHHHHHHHhCCchHHHHHHHHHHc
Q 022296 39 SHNVLEDIFESMGQ-FVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQV 113 (299)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GT--s~l~p~~~l~eKI~l~~~~gV~v~--~GtlfE~a~~qg~~~~~~yl~~~k~l 113 (299)
.+.++.+.++.+.+ -++-+-|++|+ -...+.+.+.+.++.+++.|+.++ +|. .-++.++.+++.
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-----------l~~e~l~~L~~a 168 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-----------LSESQAQRLANA 168 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-----------CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-----------CCHHHHHHHHHC
Confidence 44555555554322 36777887765 344566789999999999988654 242 235678889999
Q ss_pred CCCEEEecCCcc---------cCChhHHHHHHHHHHHcCCccc
Q 022296 114 GFDTIELNVGSL---------EIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 114 GF~~IEISdGti---------~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
|++.|-||=.+- .-+.+++.+.|+.+++.|+.+.
T Consensus 169 Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 211 (369)
T 1r30_A 169 GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVC 211 (369)
T ss_dssp CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEE
T ss_pred CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeee
Confidence 999999886551 1456889999999999998654
No 53
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=91.33 E-value=1.1 Score=44.26 Aligned_cols=107 Identities=12% Similarity=0.167 Sum_probs=81.3
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
+.+++..|-|+|=+.-.. ++.++..++++.+++.|+.++-|++-
T Consensus 123 i~ea~~~GAD~ILLi~a~--l~~~~l~~l~~~a~~lgm~~LvEvh~---------------------------------- 166 (452)
T 1pii_A 123 IYLARYYQADACLLMLSV--LDDDQYRQLAAVAHSLEMGVLTEVSN---------------------------------- 166 (452)
T ss_dssp HHHHHHTTCSEEEEETTT--CCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEEccc--CCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 445999999999998885 66788999999999999998887754
Q ss_pred CccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC-ceEEecCC-chhHHHHHHHhCCC
Q 022296 187 PEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATN-PRTSEWFIRRYGPK 263 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e-klifEAP~-k~qQ~~fI~~fG~~ 263 (299)
.+++++.+++||+.|-|+-|++-. -++.-+...+++..++.+ -+|-|+=- -.++...+..+ .+
T Consensus 167 -----------~eE~~~A~~lga~iIGinnr~L~t--~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a~ 231 (452)
T 1pii_A 167 -----------EEEQERAIALGAKVVGINNRDLRD--LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-AN 231 (452)
T ss_dssp -----------HHHHHHHHHTTCSEEEEESEETTT--TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-CS
T ss_pred -----------HHHHHHHHHCCCCEEEEeCCCCCC--CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-CC
Confidence 233388999999999999998744 355677778888888755 36677763 34555555555 44
No 54
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=91.30 E-value=2.3 Score=36.91 Aligned_cols=144 Identities=13% Similarity=0.082 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+++.++.++++||+.||+..-. ..+..++-+.+++.|+++.. ++. +..+...... .+++.+-..+
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~l~~~gl~~~~-~~~--~~~~~~~~~~-----~~~~~~~~r~-- 89 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPY----DFDADVIARELKQHNLTQVL-FNM--PPGDWAAGER-----GMAAISGREQ-- 89 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCT----TSCHHHHHHHHHHTTCEEEE-EEC--CCSCTTTTCC-----BCTTCTTCHH--
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----cCCHHHHHHHHHHcCCcEEE-Eec--CCCccccCCC-----CcCCCccHHH--
Confidence 79999999999999999998521 23456788888999998754 221 1111000000 0011000000
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccH-------HHHHH---HHhccCCCceEEec----
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DIIAK---VIGRLGLEKTMFEA---- 247 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~-------d~i~~---ii~~l~~eklifEA---- 247 (299)
..++.+ .+.++.+-+.||..|.+-+ | . ..+.-+. +.+.+ +++..|+ +|.+|.
T Consensus 90 -------~~~~~~---~~~i~~A~~lGa~~v~~~~-g-~-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~n~~ 155 (269)
T 3ngf_A 90 -------EFRDNV---DIALHYALALDCRTLHAMS-G-I-TEGLDRKACEETFIENFRYAADKLAPHGI-TVLVEPLNTR 155 (269)
T ss_dssp -------HHHHHH---HHHHHHHHHTTCCEEECCB-C-B-CTTSCHHHHHHHHHHHHHHHHHHHGGGTC-EEEECCCCTT
T ss_pred -------HHHHHH---HHHHHHHHHcCCCEEEEcc-C-C-CCCCCHHHHHHHHHHHHHHHHHHHHHcCC-EEEEeeCCcc
Confidence 113344 4445556677999998854 3 2 2222111 22222 3344455 588894
Q ss_pred --C-----CchhHHHHHHHhCC-CcccccCCCCc
Q 022296 248 --T-----NPRTSEWFIRRYGP-KVNLFVDHSQV 273 (299)
Q Consensus 248 --P-----~k~qQ~~fI~~fG~-~VNLgI~~~eV 273 (299)
| ...+-..++++.|+ +|-+.+|...+
T Consensus 156 ~~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h~ 189 (269)
T 3ngf_A 156 NMPGYFIVHQLEAVGLVKRVNRPNVAVQLDLYHA 189 (269)
T ss_dssp TSTTBSCCCHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred cCccchhcCHHHHHHHHHHhCCCCCCeEEEhhhH
Confidence 2 45567889999984 45443554433
No 55
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=91.23 E-value=0.68 Score=41.77 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCC------cccC-----ChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG------SLEI-----PEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG------ti~i-----~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||++||+... ...+ +.++..++-+.+++.|+++..
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~ 94 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISS 94 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEE
Confidence 6999999999999999999854 1233 223677888889999998743
No 56
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.16 E-value=2 Score=38.89 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=41.7
Q ss_pred cc-EEEeeCccc------cc-CChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022296 54 VD-GLKFSGGSH------SL-MPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 54 ID-~lKfg~GTs------~l-~p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (299)
.| ++=+.++|- .+ .+.+.+.+.++-.++. ++++. ++ | ....+.++.+.|.+.|.|.|-+
T Consensus 120 ~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~-~-------~~~~~~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 120 FSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY-F-------DLVHFDIMAEILNQFPLTYVNS 191 (311)
T ss_dssp CCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC-C-------SHHHHHHHHHHHTTSCCCEEEE
T ss_pred CCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC-C-------CHHHHHHHHHHHHHcCCcEEEe
Confidence 35 555555432 22 2666778888888876 55443 33 2 1125677888999999999999
Q ss_pred cCCc
Q 022296 121 NVGS 124 (299)
Q Consensus 121 SdGt 124 (299)
++.+
T Consensus 192 ~~~~ 195 (311)
T 1jub_A 192 VNSI 195 (311)
T ss_dssp CCCE
T ss_pred cCCC
Confidence 9986
No 57
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=91.14 E-value=0.72 Score=42.73 Aligned_cols=132 Identities=16% Similarity=0.227 Sum_probs=77.7
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (299)
.+...+..+|- ++++=. + .++.+.+++.++.+++. +.++.- .++ +... .++++++.|.+.|+|.|++
T Consensus 27 ~la~av~~aG~-lG~i~~--~---~~~~~~~~~~i~~i~~~~~~p~gv-nl~---~~~~--~~~~~~~~a~~~g~d~V~~ 94 (332)
T 2z6i_A 27 DLAGAVSKAGG-LGIIGG--G---NAPKEVVKANIDKIKSLTDKPFGV-NIM---LLSP--FVEDIVDLVIEEGVKVVTT 94 (332)
T ss_dssp HHHHHHHHHTS-BEEEEC--T---TCCHHHHHHHHHHHHHHCCSCEEE-EEC---TTST--THHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCC-cEEeCC--C---CCCHHHHHHHHHHHHHhcCCCEEE-Eec---CCCC--CHHHHHHHHHHCCCCEEEE
Confidence 45555666664 666622 2 23556677777777753 111111 111 0122 5889999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHH
Q 022296 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRR 200 (299)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 200 (299)
+.|. | .++++.+++.|+++... + . . ++.
T Consensus 95 ~~g~---p----~~~i~~l~~~g~~v~~~--v----~------------------------------~---------~~~ 122 (332)
T 2z6i_A 95 GAGN---P----SKYMERFHEAGIIVIPV--V----P------------------------------S---------VAL 122 (332)
T ss_dssp CSSC---G----GGTHHHHHHTTCEEEEE--E----S------------------------------S---------HHH
T ss_pred CCCC---h----HHHHHHHHHcCCeEEEE--e----C------------------------------C---------HHH
Confidence 9883 3 24667777777665421 1 0 0 344
Q ss_pred HHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHhcc
Q 022296 201 AERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~~l 238 (299)
++...++|||.|++++. |=... .....+++.++.+.+
T Consensus 123 a~~~~~~GaD~i~v~g~~~GG~~g-~~~~~~ll~~i~~~~ 161 (332)
T 2z6i_A 123 AKRMEKIGADAVIAEGMEAGGHIG-KLTTMTLVRQVATAI 161 (332)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECC-SSCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCC-CccHHHHHHHHHHhc
Confidence 56778899999999875 21110 123346666666544
No 58
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.10 E-value=0.78 Score=40.83 Aligned_cols=85 Identities=12% Similarity=0.114 Sum_probs=58.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
++++.+.|.|.|-+... .-..++...++++.+++.|+.+..++.-
T Consensus 94 i~~~~~~Gad~V~l~~~-~~~~p~~l~~~i~~~~~~g~~v~~~v~t---------------------------------- 138 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGT-ARQRPVAVEALLARIHHHHLLTMADCSS---------------------------------- 138 (232)
T ss_dssp HHHHHHHTCSEEEEECC-SSCCSSCHHHHHHHHHHTTCEEEEECCS----------------------------------
T ss_pred HHHHHHcCCCEEEECcc-ccCCHHHHHHHHHHHHHCCCEEEEeCCC----------------------------------
Confidence 57789999999977544 4344467778999999987775543211
Q ss_pred CccchhhhhhhHHHHHHHHHccCcEEEEeccccccC--CCcccHHHHHHHHhc
Q 022296 187 PEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGR 237 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~--~G~~r~d~i~~ii~~ 237 (299)
.+.+++..++||++|.+-.+|.... ......+++.++.+.
T Consensus 139 -----------~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~ 180 (232)
T 3igs_A 139 -----------VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA 180 (232)
T ss_dssp -----------HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT
T ss_pred -----------HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc
Confidence 3445788999999998877775442 223456777777653
No 59
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.98 E-value=0.87 Score=41.39 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=82.0
Q ss_pred ccEEEeeCccc-ccCCh-hHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc-----
Q 022296 54 VDGLKFSGGSH-SLMPK-PFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL----- 125 (299)
Q Consensus 54 ID~lKfg~GTs-~l~p~-~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti----- 125 (299)
+|.+=+|+-.+ -..|. +...+.++.+++. ++++.. |. .+ .+-++.+.+.|++.|-|+...-
T Consensus 40 v~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~--l~-----~n----~~~i~~a~~~G~~~V~i~~~~S~~h~~ 108 (295)
T 1ydn_A 40 YARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSV--LV-----PN----MKGYEAAAAAHADEIAVFISASEGFSK 108 (295)
T ss_dssp CSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEE--EC-----SS----HHHHHHHHHTTCSEEEEEEESCHHHHH
T ss_pred cCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEE--Ee-----CC----HHHHHHHHHCCCCEEEEEEecCHHHHH
Confidence 55666654322 22220 1234555555544 665532 21 22 3456788889999999986332
Q ss_pred ---cCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhH
Q 022296 126 ---EIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKS 198 (299)
Q Consensus 126 ---~i~~~~----r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 198 (299)
..+.++ -.+.|+.+++.|+.|-.+++.-++ ..+. . ..+++.+ +
T Consensus 109 ~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~-----~e~~-------------~---------~~~~~~~---~ 158 (295)
T 1ydn_A 109 ANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVE-----CPYD-------------G---------PVTPQAV---A 158 (295)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSE-----ETTT-------------E---------ECCHHHH---H
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEec-----CCcC-------------C---------CCCHHHH---H
Confidence 344443 245689999999998777765322 1111 0 1237788 8
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 199 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
+.++...++||+.|-+= |..|...+..+.++++.
T Consensus 159 ~~~~~~~~~G~d~i~l~-----Dt~G~~~P~~~~~lv~~ 192 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLG-----DTIGRGTPDTVAAMLDA 192 (295)
T ss_dssp HHHHHHHHHTCSEEEEE-----ETTSCCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEec-----CCCCCcCHHHHHHHHHH
Confidence 88899999999987653 56666666666666543
No 60
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=90.79 E-value=0.6 Score=43.35 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=104.5
Q ss_pred CCceecCCcHH--HHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeec
Q 022296 82 HDVYVSTGDWA--EHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMF 154 (299)
Q Consensus 82 ~gV~v~~Gtlf--E~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~ 154 (299)
.||.+..=|.| +- -.=+.+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 13 ~Gv~~a~vTPF~~~d-g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv-- 88 (314)
T 3d0c_A 13 STISGINIVPFLEGT-REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RATVVAGI-- 88 (314)
T ss_dssp SSEEECCCCCBCTTT-CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE--
T ss_pred CceEEeeeccccCCC-CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCeEEecC--
Confidence 56666555644 21 0111236888999999999999987543 3489999999999999873 1 11111122
Q ss_pred CCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-----------------
Q 022296 155 NKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD----------------- 217 (299)
Q Consensus 155 ~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar----------------- 217 (299)
.. +..+. |+.++..-++|||.|++=.-
T Consensus 89 --------------------------------g~-st~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~v 132 (314)
T 3d0c_A 89 --------------------------------GY-SVDTA---IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNI 132 (314)
T ss_dssp --------------------------------CS-SHHHH---HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHH
T ss_pred --------------------------------Cc-CHHHH---HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHH
Confidence 11 24556 88899999999999998652
Q ss_pred --------ccccCCCcccHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCC--CcccccCCCCchhhhhhhcccC
Q 022296 218 --------DVCKHADSLRADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGP--KVNLFVDHSQVMDLECLRGRNL 284 (299)
Q Consensus 218 --------gi~d~~G~~r~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~--~VNLgI~~~eVi~LE~LR~~~~ 284 (299)
-||+..|.+..+.+.++++ ..+|+- |+ .+-.+...+++..++ ++.+.--.+++..+++|..|--
T Consensus 133 a~a~~lPiilYn~tg~l~~~~~~~La~---~pnIvgiKdssgd~~~~~~~~~~~~~~~~f~v~~G~d~~~~~~~l~~G~~ 209 (314)
T 3d0c_A 133 IEALDAPSIIYFKDAHLSDDVIKELAP---LDKLVGIKYAINDIQRVTQVMRAVPKSSNVAFICGTAEKWAPFFYHAGAV 209 (314)
T ss_dssp HHHSSSCEEEEECCTTSCTHHHHHHTT---CTTEEEEEECCCCHHHHHHHHHHSCGGGCCEEEETTHHHHHHHHHHHTCC
T ss_pred HHhCCCCEEEEeCCCCcCHHHHHHHHc---CCCEEEEEeCCCCHHHHHHHHHhcCCCCCEEEEEeCcHHHHHHHHHcCCC
Confidence 1677556566777887763 345532 44 456667778888776 6666444444377888886643
Q ss_pred C
Q 022296 285 G 285 (299)
Q Consensus 285 G 285 (299)
|
T Consensus 210 G 210 (314)
T 3d0c_A 210 G 210 (314)
T ss_dssp E
T ss_pred E
Confidence 3
No 61
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.72 E-value=0.94 Score=38.43 Aligned_cols=125 Identities=10% Similarity=0.115 Sum_probs=69.3
Q ss_pred chhH-HHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNV-LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~-l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
++++ .+...+.-+ |++=+.. ...++.+++-++.++++|+.+...- -+|....+.++.+.+.|.+.
T Consensus 65 ~~~~~~~~~~~~Ga---d~v~v~~----~~~~~~~~~~~~~~~~~g~~~~v~~-------~~~~t~~~~~~~~~~~g~d~ 130 (211)
T 3f4w_A 65 GGHFESQLLFDAGA---DYVTVLG----VTDVLTIQSCIRAAKEAGKQVVVDM-------ICVDDLPARVRLLEEAGADM 130 (211)
T ss_dssp CHHHHHHHHHHTTC---SEEEEET----TSCHHHHHHHHHHHHHHTCEEEEEC-------TTCSSHHHHHHHHHHHTCCE
T ss_pred chHHHHHHHHhcCC---CEEEEeC----CCChhHHHHHHHHHHHcCCeEEEEe-------cCCCCHHHHHHHHHHcCCCE
Confidence 3344 455554443 5555432 2234567888888888888654210 01123445567777888998
Q ss_pred EEecCCccc--CChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhh
Q 022296 118 IELNVGSLE--IPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGV 193 (299)
Q Consensus 118 IEISdGti~--i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (299)
|=++.|+-. .+.. -.+.++++++. .+.+....|+. ++
T Consensus 131 i~v~~g~~g~~~~~~-~~~~i~~l~~~~~~~~i~~~gGI~-------------------------------------~~- 171 (211)
T 3f4w_A 131 LAVHTGTDQQAAGRK-PIDDLITMLKVRRKARIAVAGGIS-------------------------------------SQ- 171 (211)
T ss_dssp EEEECCHHHHHTTCC-SHHHHHHHHHHCSSCEEEEESSCC-------------------------------------TT-
T ss_pred EEEcCCCcccccCCC-CHHHHHHHHHHcCCCcEEEECCCC-------------------------------------HH-
Confidence 887766421 1111 13455555553 23333333331 12
Q ss_pred hhhhHHHHHHHHHccCcEEEEeccccccCC
Q 022296 194 GINKSRRAERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 194 ~~~~i~~~~~dLeAGA~~VIiEargi~d~~ 223 (299)
+++..+++||+.|++= +.|+++.
T Consensus 172 ------~~~~~~~~Gad~vvvG-sai~~~~ 194 (211)
T 3f4w_A 172 ------TVKDYALLGPDVVIVG-SAITHAA 194 (211)
T ss_dssp ------THHHHHTTCCSEEEEC-HHHHTCS
T ss_pred ------HHHHHHHcCCCEEEEC-HHHcCCC
Confidence 2366789999999884 5687764
No 62
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=90.64 E-value=0.19 Score=46.86 Aligned_cols=119 Identities=18% Similarity=0.296 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhC-----CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHHH
Q 022296 71 FIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLVK 140 (299)
Q Consensus 71 ~l~eKI~l~~~~-----gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~lI~~~~ 140 (299)
.+.|.++-.++. +|++++..|.+--+ ..+...++.+.+.+.|.++|+||+|+.. .++.....+++.++
T Consensus 196 ~~~eiv~avr~~v~~pv~vris~~~~~~~g~--~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir 273 (338)
T 1z41_A 196 FLREIIDEVKQVWDGPLFVRVSASDYTDKGL--DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIR 273 (338)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCCSTTSC--CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEecCcccCCCCC--CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHH
Confidence 355666666543 33566654433100 0113556777888899999999999753 22223356777777
Q ss_pred HcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEecccc
Q 022296 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDV 219 (299)
Q Consensus 141 ~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi 219 (299)
+. +++. .--+ ++ ..+ .+.+++.|++| ||.|++ +|.+
T Consensus 274 ~~-------~~iP--Vi~~---Gg---------------------i~s---------~~~a~~~l~~G~aD~V~i-GR~~ 310 (338)
T 1z41_A 274 EQ-------ADMA--TGAV---GM---------------------ITD---------GSMAEEILQNGRADLIFI-GREL 310 (338)
T ss_dssp HH-------HCCE--EEEC---SS---------------------CCS---------HHHHHHHHHTTSCSEEEE-CHHH
T ss_pred HH-------CCCC--EEEE---CC---------------------CCC---------HHHHHHHHHcCCceEEee-cHHH
Confidence 62 2221 1000 00 001 34558899999 999988 5655
Q ss_pred ccCCCcccHHHHHHHHhccC
Q 022296 220 CKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 220 ~d~~G~~r~d~i~~ii~~l~ 239 (299)
..+ .+++.++.+.++
T Consensus 311 i~n-----Pdl~~ki~~~~~ 325 (338)
T 1z41_A 311 LRD-----PFFARTAAKQLN 325 (338)
T ss_dssp HHC-----TTHHHHHHHHTT
T ss_pred HhC-----chHHHHHHcCCC
Confidence 432 567888887776
No 63
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.64 E-value=5.6 Score=36.73 Aligned_cols=133 Identities=18% Similarity=0.222 Sum_probs=81.2
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCC-ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~g-V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (299)
.+......+| ++.++= + ..++.+.+++.++.+++.- .++--+.+. .+. .++++++.+.+.|.+.|.+
T Consensus 41 ~la~av~~aG-glG~i~----~-~~~~~~~l~~~i~~i~~~~~~p~gVnl~~----~~~--~~~~~~~~~~~~g~d~V~l 108 (326)
T 3bo9_A 41 TLAAAVSEAG-GLGIIG----S-GAMKPDDLRKAISELRQKTDKPFGVNIIL----VSP--WADDLVKVCIEEKVPVVTF 108 (326)
T ss_dssp HHHHHHHHTT-SBEEEE----C-TTCCHHHHHHHHHHHHTTCSSCEEEEEET----TST--THHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCC-CcEEeC----C-CCCCHHHHHHHHHHHHHhcCCCEEEEEec----cCC--CHHHHHHHHHHCCCCEEEE
Confidence 4555556666 566662 1 2246677888888888752 222112111 122 6789999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHH
Q 022296 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRR 200 (299)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 200 (299)
+-|. | .++++.+++.|.++.+ .+ . + .+.
T Consensus 109 ~~g~---p----~~~~~~l~~~g~~v~~--~v---~-------------------------------s---------~~~ 136 (326)
T 3bo9_A 109 GAGN---P----TKYIRELKENGTKVIP--VV---A-------------------------------S---------DSL 136 (326)
T ss_dssp ESSC---C----HHHHHHHHHTTCEEEE--EE---S-------------------------------S---------HHH
T ss_pred CCCC---c----HHHHHHHHHcCCcEEE--Ec---C-------------------------------C---------HHH
Confidence 8773 4 3567788887766553 11 0 0 334
Q ss_pred HHHHHHccCcEEEEeccccccCCC-cccHHHHHHHHhcc
Q 022296 201 AERCLEAGADMIMIDSDDVCKHAD-SLRADIIAKVIGRL 238 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEargi~d~~G-~~r~d~i~~ii~~l 238 (299)
+++..++|||.|++++.+---..| ....+++.++.+.+
T Consensus 137 a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~ 175 (326)
T 3bo9_A 137 ARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV 175 (326)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc
Confidence 467789999999999852100112 23345666666544
No 64
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.43 E-value=2.1 Score=39.78 Aligned_cols=120 Identities=18% Similarity=0.180 Sum_probs=78.9
Q ss_pred HHHHHHHHcCCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCC
Q 022296 105 EYVEDCKQVGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~ 174 (299)
+-.+..-+.|..+|-|-|+.. -+|.++.++-|+.+++.+- -+.|-++- ..|.
T Consensus 101 ~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~--~~~~~i~a-------Rtda--------- 162 (287)
T 3b8i_A 101 RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARV--DPALTIIA-------RTNA--------- 162 (287)
T ss_dssp HHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCC--STTSEEEE-------EEET---------
T ss_pred HHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCC--CCCcEEEE-------echh---------
Confidence 334445568999999999864 3788899999999999865 23444420 0110
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC-CchhH
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT-NPRTS 253 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP-~k~qQ 253 (299)
+ . -.++++ |++++...+||||.|.+|+- ...+++.+|.+.++.--+|.|-- .+..-
T Consensus 163 ---------a-~--~gl~~a---i~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~ 219 (287)
T 3b8i_A 163 ---------E-L--IDVDAV---IQRTLAYQEAGADGICLVGV--------RDFAHLEAIAEHLHIPLMLVTYGNPQLRD 219 (287)
T ss_dssp ---------T-T--SCHHHH---HHHHHHHHHTTCSEEEEECC--------CSHHHHHHHHTTCCSCEEEECTTCGGGCC
T ss_pred ---------h-h--cCHHHH---HHHHHHHHHcCCCEEEecCC--------CCHHHHHHHHHhCCCCEEEeCCCCCCCCC
Confidence 0 0 015677 99999999999999999963 23688999999888444477741 11222
Q ss_pred HHHHHHhCCCcccc
Q 022296 254 EWFIRRYGPKVNLF 267 (299)
Q Consensus 254 ~~fI~~fG~~VNLg 267 (299)
..=+...| ||+-
T Consensus 220 ~~eL~~lG--v~~v 231 (287)
T 3b8i_A 220 DARLARLG--VRVV 231 (287)
T ss_dssp HHHHHHTT--EEEE
T ss_pred HHHHHHcC--CcEE
Confidence 23355556 5554
No 65
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=90.21 E-value=3.8 Score=37.63 Aligned_cols=111 Identities=11% Similarity=0.106 Sum_probs=84.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
+.+++..|-|+|=+..- .++.++..++++.+++.|+.++.|++-
T Consensus 135 i~ea~~~GAD~VlLi~a--~L~~~~l~~l~~~a~~lGl~~lvevh~---------------------------------- 178 (272)
T 3tsm_A 135 VYEARSWGADCILIIMA--SVDDDLAKELEDTAFALGMDALIEVHD---------------------------------- 178 (272)
T ss_dssp HHHHHHTTCSEEEEETT--TSCHHHHHHHHHHHHHTTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEEccc--ccCHHHHHHHHHHHHHcCCeEEEEeCC----------------------------------
Confidence 66789999999999766 457888899999999999988877642
Q ss_pred CccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC-ceEEecCC-chhHHHHHHHhCCCc
Q 022296 187 PEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE-KTMFEATN-PRTSEWFIRRYGPKV 264 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e-klifEAP~-k~qQ~~fI~~fG~~V 264 (299)
.++ +++.+++||++|=+-.|++..- .+.-+...+++..++.+ -+|-|.=- ...+...+...|.+-
T Consensus 179 ----~eE-------l~~A~~~ga~iIGinnr~l~t~--~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~g 245 (272)
T 3tsm_A 179 ----EAE-------MERALKLSSRLLGVNNRNLRSF--EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGT 245 (272)
T ss_dssp ----HHH-------HHHHTTSCCSEEEEECBCTTTC--CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCE
T ss_pred ----HHH-------HHHHHhcCCCEEEECCCCCccC--CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCE
Confidence 233 3788899999999988865332 34566777888888754 46777764 567788888888876
Q ss_pred cc
Q 022296 265 NL 266 (299)
Q Consensus 265 NL 266 (299)
=|
T Consensus 246 vL 247 (272)
T 3tsm_A 246 FL 247 (272)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 66
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=90.16 E-value=0.76 Score=39.79 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=71.5
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc-ccCChhHHHHHHHHHHhCCceecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~eKI~l~~~~gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (299)
.+++.++.+.+. .|.+=+..... .-++.+.+++..++++++|+.++. +.+.. +..+.+++.++.|+++|.+.|
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----CCHHHHHHHHHHHHHhCCCEE
Confidence 355555555544 67777765421 123456688999999999998775 32211 233478999999999999999
Q ss_pred EecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 022296 119 ELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
=+.-| .+.+.++.+.+++.|+++.-|-.
T Consensus 107 ~~~p~-----~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 107 VGVPN-----YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEEEC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred EecCC-----HHHHHHHHHHHHHcCCEEEEecC
Confidence 98654 57788899999999998666654
No 67
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=89.98 E-value=1.5 Score=37.97 Aligned_cols=47 Identities=17% Similarity=0.360 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+..... ..+..+..++.+.+++.|+++..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 689999999999999999986542 33446777889999999999776
No 68
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=89.95 E-value=1.5 Score=39.44 Aligned_cols=44 Identities=14% Similarity=0.237 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCEEEecCCcc-cCC----hhHHHHHHHHHHHcCCc---ccc
Q 022296 105 EYVEDCKQVGFDTIELNVGSL-EIP----EETLLRYVRLVKSAGLK---AKP 148 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-~i~----~~~r~~lI~~~~~~G~~---v~~ 148 (299)
+.++.++++||+.||++.... ..+ .++..++-+.+++.|++ +.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~ 86 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIST 86 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEE
Confidence 899999999999999986543 222 36677888889999999 655
No 69
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=89.81 E-value=4.1 Score=37.55 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=94.7
Q ss_pred HHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 103 FKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 103 ~~~y-l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
+++| +.+++.+|=|+|=+-.. -++.++..++++.+++.||.|+-|+.-
T Consensus 114 id~yQI~eAr~~GADaILLI~a--~L~~~~l~~l~~~A~~lGl~~LvEVh~----------------------------- 162 (258)
T 4a29_A 114 VKESQIDDAYNLGADTVLLIVK--ILTERELESLLEYARSYGMEPLILIND----------------------------- 162 (258)
T ss_dssp CSHHHHHHHHHHTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCCCEEEESS-----------------------------
T ss_pred ccHHHHHHHHHcCCCeeehHHh--hcCHHHHHHHHHHHHHHhHHHHHhcch-----------------------------
Confidence 5555 67899999999976544 367888899999999999999988754
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCce-EEecC-CchhHHHHHHH
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT-MFEAT-NPRTSEWFIRR 259 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekl-ifEAP-~k~qQ~~fI~~ 259 (299)
.+++ ++.+++||+.|-|-.|.+- +-++.-+...+++..+|.+.+ |-|.= ....+...++.
T Consensus 163 ---------~~El-------~rAl~~~a~iIGINNRnL~--tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~ 224 (258)
T 4a29_A 163 ---------ENDL-------DIALRIGARFIGIMSRDFE--TGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRK 224 (258)
T ss_dssp ---------HHHH-------HHHHHTTCSEEEECSBCTT--TCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHH
T ss_pred ---------HHHH-------HHHhcCCCcEEEEeCCCcc--ccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHH
Confidence 1334 7889999999999998762 345567778889999987766 55655 34567888999
Q ss_pred hCCCccc-c---cCCCCchhhhhhhccc
Q 022296 260 YGPKVNL-F---VDHSQVMDLECLRGRN 283 (299)
Q Consensus 260 fG~~VNL-g---I~~~eVi~LE~LR~~~ 283 (299)
.|.+-=| | +...| ++..|..|.
T Consensus 225 ~G~~a~LVGealmr~~d--~~~~Li~G~ 250 (258)
T 4a29_A 225 LGVNAFLISSSLMRNPE--KIKELIEGS 250 (258)
T ss_dssp TTCCEEEECHHHHHCTT--HHHHHHC--
T ss_pred CCCCEEEECHHHhCCCc--HHHHHHcCc
Confidence 9988666 4 33333 345555443
No 70
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=89.71 E-value=0.64 Score=39.98 Aligned_cols=139 Identities=17% Similarity=0.267 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHcCCCEEEec-CCccc--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELN-VGSLE--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS-dGti~--i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+++.++.++++||+.||+. ..... ++.....++.+.+++.|+++.+ ++.-.+. .+ .|+ ..+
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~---~~-~~~--------~~~-- 79 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLA-LNALVFF---NN-RDE--------KGH-- 79 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEE-EEEEECC---SS-CCH--------HHH--
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeee-ecccccc---cc-CCH--------HHH--
Confidence 68899999999999999998 54331 2345566788888889998754 4332111 11 010 000
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccH-------HH---HHHHHhccCCCceEEecC
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRA-------DI---IAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~-------d~---i~~ii~~l~~eklifEAP 248 (299)
+ -.++.+ .+.++.+-+.||..|.+=+ |.... +.-+. +. +.++++..|+ ++.+|.-
T Consensus 80 ~---------~~~~~~---~~~i~~a~~lG~~~v~~~~-g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~ 144 (278)
T 1i60_A 80 N---------EIITEF---KGMMETCKTLGVKYVVAVP-LVTEQ-KIVKEEIKKSSVDVLTELSDIAEPYGV-KIALEFV 144 (278)
T ss_dssp H---------HHHHHH---HHHHHHHHHHTCCEEEEEC-CBCSS-CCCHHHHHHHHHHHHHHHHHHHGGGTC-EEEEECC
T ss_pred H---------HHHHHH---HHHHHHHHHcCCCEEEEec-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHhcCC-EEEEEec
Confidence 0 113444 4555556678999998833 21111 11011 11 2222333444 5777754
Q ss_pred --------CchhHHHHHHHhCC-CcccccCC
Q 022296 249 --------NPRTSEWFIRRYGP-KVNLFVDH 270 (299)
Q Consensus 249 --------~k~qQ~~fI~~fG~-~VNLgI~~ 270 (299)
+..+-..+++..|+ +|-+.+|.
T Consensus 145 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~D~ 175 (278)
T 1i60_A 145 GHPQCTVNTFEQAYEIVNTVNRDNVGLVLDS 175 (278)
T ss_dssp CCTTBSSCSHHHHHHHHHHHCCTTEEEEEEH
T ss_pred CCccchhcCHHHHHHHHHHhCCCCeeEEEEe
Confidence 34566788899984 55443443
No 71
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.49 E-value=1.2 Score=40.96 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc----cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL----EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti----~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+. ||. .|+.++|.++++.+.+. +=++.-=+|+
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------ 80 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPL-GSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGV------------------------ 80 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTT-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEE------------------------
T ss_pred HHHHHHHHHHHcCCCEEEEC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Confidence 67888888889999999554 443 69999999999999883 1111111122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccCC----Cccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKHA----DSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~~----G~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+.= -++.
T Consensus 81 ----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~ 147 (300)
T 3eb2_A 81 ----------ASTSVADA---VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLT 147 (300)
T ss_dssp ----------EESSHHHH---HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCC
T ss_pred ----------CCCCHHHH---HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCC
Confidence 01124556 88899999999999999652 156642 2566
Q ss_pred HHHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++. +.+ +|+ =|+ .+-.+...+++..++++.++.-.++. .+++|..|--|
T Consensus 148 ~~~~~~La-~~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~~-~~~~l~~G~~G 204 (300)
T 3eb2_A 148 LDVIARLA-EHP--RIRYIKDASTNTGRLLSIINRCGDALQVFSASAHI-PAAVMLIGGVG 204 (300)
T ss_dssp HHHHHHHH-TST--TEEEEEECSSBHHHHHHHHHHHGGGSEEEECTTSC-HHHHHHTTCCE
T ss_pred HHHHHHHH-cCC--CEEEEEcCCCCHHHHHHHHHHcCCCeEEEeCcHHH-HHHHHhCCCCE
Confidence 77888775 333 332 244 45566677888888777776544444 48888866433
No 72
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=89.48 E-value=2.9 Score=37.82 Aligned_cols=71 Identities=23% Similarity=0.187 Sum_probs=47.7
Q ss_pred EEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHHHH
Q 022296 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLLR 134 (299)
Q Consensus 56 ~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r~~ 134 (299)
.-|||.|++.+-. ..+....+|.| .+..+++.++.++++ ||++||+.-.. .. .++..+
T Consensus 7 ~~~~~~~~w~~~~------------~~~~f~~~g~~-------~~~~~~e~l~~aa~~~G~~~VEl~~~~-~~-~~~~~~ 65 (333)
T 3ktc_A 7 YPEFGAGLWHFAN------------YIDRYAVDGYG-------PALSTIDQINAAKEVGELSYVDLPYPF-TP-GVTLSE 65 (333)
T ss_dssp CCCEEEEGGGGSC------------CCCSSSTTCSS-------CCCCHHHHHHHHHHHSSEEEEEEEESC-ST-TCCHHH
T ss_pred CCcceeeeeeeec------------ccccccCCCCC-------CCCCHHHHHHHHHHhCCCCEEEecCCC-cc-hhHHHH
Confidence 3588888888755 12222222322 134799999999999 99999996111 11 356677
Q ss_pred HHHHHHHcCCccc
Q 022296 135 YVRLVKSAGLKAK 147 (299)
Q Consensus 135 lI~~~~~~G~~v~ 147 (299)
+-+.+++.|+++.
T Consensus 66 l~~~l~~~Gl~i~ 78 (333)
T 3ktc_A 66 VKDALKDAGLKAI 78 (333)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8888999999874
No 73
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=89.42 E-value=0.91 Score=42.19 Aligned_cols=96 Identities=21% Similarity=0.281 Sum_probs=62.6
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCC
Q 022296 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (299)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
+..+. |.++|-|-||. ...+.|+.+.++|.+|.-.+|.+-. + .+.++.|..-. -.
T Consensus 114 rl~ka-Ga~aVklEdg~------~~~~~i~~l~~~GIpv~gHlgltPq-~------~~~~gg~~vqg-----------rt 168 (275)
T 3vav_A 114 KLMRA-GAQMVKFEGGE------WLAETVRFLVERAVPVCAHVGLTPQ-S------VHAFGGFKVQG-----------KT 168 (275)
T ss_dssp HHHHT-TCSEEEEECCG------GGHHHHHHHHHTTCCEEEEEESCGG-G------HHHHC---CCC-----------CS
T ss_pred HHHHc-CCCEEEECCch------hHHHHHHHHHHCCCCEEEecCCCce-E------EeccCCeEEEc-----------CC
Confidence 33444 99999999994 4478899999999999988886411 1 11111111110 01
Q ss_pred ccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCC
Q 022296 188 EIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 188 ~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
+-..+++ |++++..-+|||+.|.+|+= .++++++|.+++++
T Consensus 169 ~~~a~~~---i~rA~a~~eAGA~~ivlE~v---------p~~~a~~It~~l~i 209 (275)
T 3vav_A 169 EAGAAQL---LRDARAVEEAGAQLIVLEAV---------PTLVAAEVTRELSI 209 (275)
T ss_dssp HHHHHHH---HHHHHHHHHHTCSEEEEESC---------CHHHHHHHHHHCSS
T ss_pred HHHHHHH---HHHHHHHHHcCCCEEEecCC---------CHHHHHHHHHhCCC
Confidence 1125677 99999999999999999972 23355666655553
No 74
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=89.33 E-value=3.2 Score=41.78 Aligned_cols=146 Identities=11% Similarity=0.144 Sum_probs=98.9
Q ss_pred hcccccEEEeeCcccccCChhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC
Q 022296 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (299)
Q Consensus 50 ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i 127 (299)
...=+|.+-+-..++-+ +.+++-|+.++++|..+ +... |.....+++.+-+..+.+.++|.+.|=|-|-.--+
T Consensus 127 ~~aGvd~vrIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~ 201 (539)
T 1rqb_A 127 AENGMDVFRVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICY--TISPVHTVEGYVKLAGQLLDMGADSIALKDMAALL 201 (539)
T ss_dssp HHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEEC--CCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCC
T ss_pred HhCCCCEEEEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEe--eeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCc
Confidence 33448988887766655 67999999999999966 2110 00012233456666777788999999999988888
Q ss_pred ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHc
Q 022296 128 PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEA 207 (299)
Q Consensus 128 ~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeA 207 (299)
.+.+-.++|+.++++ +...-.+++.+.. | .... +-.+...++|
T Consensus 202 ~P~~v~~lv~~l~~~-~p~~i~I~~H~Hn-------d--------------------------~GlA---vAN~laAveA 244 (539)
T 1rqb_A 202 KPQPAYDIIKAIKDT-YGQKTQINLHCHS-------T--------------------------TGVT---EVSLMKAIEA 244 (539)
T ss_dssp CHHHHHHHHHHHHHH-HCTTCCEEEEEBC-------T--------------------------TSCH---HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHh-cCCCceEEEEeCC-------C--------------------------CChH---HHHHHHHHHh
Confidence 899889999999884 1001134443211 1 2233 5666889999
Q ss_pred cCcEEEEecc--ccccCCCcccHHHHHHHHhccC
Q 022296 208 GADMIMIDSD--DVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 208 GA~~VIiEar--gi~d~~G~~r~d~i~~ii~~l~ 239 (299)
||+.| ++- |+=...||...+.+-..+...|
T Consensus 245 Ga~~V--D~ti~g~GertGN~~lE~lv~~L~~~g 276 (539)
T 1rqb_A 245 GVDVV--DTAISSMSLGPGHNPTESVAEMLEGTG 276 (539)
T ss_dssp TCSEE--EEBCGGGCSTTSBCBHHHHHHHTTTSS
T ss_pred CCCEE--EEeccccCCCccChhHHHHHHHHHhcC
Confidence 99965 664 7877889988877766665544
No 75
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=89.33 E-value=1.8 Score=37.20 Aligned_cols=87 Identities=8% Similarity=-0.040 Sum_probs=50.5
Q ss_pred CceeEecCCCCCCcc--hhHHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCC
Q 022296 25 GVTEMRSPHYTLSSS--HNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGP 100 (299)
Q Consensus 25 GlT~V~DkGl~~~~g--~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~ 100 (299)
|...+.|-.+ + ++..+.+.+.+.+. .|++=+-. ....+. ++.++++ ||.+.|.|-.|....+-.
T Consensus 51 ~~~v~~D~kl----~DI~~t~~~~v~~~~~~Gad~vtvh~----~~g~~~----i~~~~~~~gv~vl~~t~~~~~~~~~~ 118 (208)
T 2czd_A 51 GVEIIADLKL----ADIPNTNRLIARKVFGAGADYVIVHT----FVGRDS----VMAVKELGEIIMVVEMSHPGALEFIN 118 (208)
T ss_dssp CCEEEEEEEE----CSCHHHHHHHHHHHHHTTCSEEEEES----TTCHHH----HHHHHTTSEEEEECCCCSGGGGTTTG
T ss_pred CCEEEEEeee----CchHHHHHHHHHHHHhcCCCEEEEec----cCCHHH----HHHHHHhCCcEEEEecCCcchhhHHH
Confidence 6677778777 3 33334433333322 34333321 122232 5566666 998888763332211002
Q ss_pred chHHHHHHHHHHcCCCEEEecCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVG 123 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG 123 (299)
+.++..+..+.+.||+.+-++..
T Consensus 119 ~~v~~~~~~a~~~G~~G~~~~~~ 141 (208)
T 2czd_A 119 PLTDRFIEVANEIEPFGVIAPGT 141 (208)
T ss_dssp GGHHHHHHHHHHHCCSEEECCCS
T ss_pred HHHHHHHHHHHHhCCcEEEECCC
Confidence 38999999999999999988865
No 76
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=89.32 E-value=2.5 Score=38.74 Aligned_cols=138 Identities=16% Similarity=0.146 Sum_probs=79.9
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (299)
.+-.....+| ++.++ +.++ +.+.+.+++.++.++++ +.++--+.+....+ .+..++++++.|.+.|.+.|.+
T Consensus 30 ~la~av~~aG-glG~i--~~~~--~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~--~~~~~~~~~~~~~~~g~d~V~~ 102 (328)
T 2gjl_A 30 EMAAAVANAG-GLATL--SALT--QPSPEALAAEIARCRELTDRPFGVNLTLLPTQ--KPVPYAEYRAAIIEAGIRVVET 102 (328)
T ss_dssp HHHHHHHHTT-SBCEE--ETTT--SSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS--SCCCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCC-CeEEe--CCCC--CCCHHHHHHHHHHHHHhcCCCeEEEEeccccc--cCccHHHHHHHHHhcCCCEEEE
Confidence 4555556666 56666 2222 33356677777777653 21111111110000 1236899999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHH
Q 022296 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRR 200 (299)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 200 (299)
+-|. | .++++.+++.|.++.+ .+ .+ .+.
T Consensus 103 ~~g~---p----~~~~~~l~~~gi~vi~--~v---~t----------------------------------------~~~ 130 (328)
T 2gjl_A 103 AGND---P----GEHIAEFRRHGVKVIH--KC---TA----------------------------------------VRH 130 (328)
T ss_dssp EESC---C----HHHHHHHHHTTCEEEE--EE---SS----------------------------------------HHH
T ss_pred cCCC---c----HHHHHHHHHcCCCEEe--eC---CC----------------------------------------HHH
Confidence 8763 4 3677888887776552 12 00 333
Q ss_pred HHHHHHccCcEEEEeccc---cccCCCcccHHHHHHHHhcc
Q 022296 201 AERCLEAGADMIMIDSDD---VCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEarg---i~d~~G~~r~d~i~~ii~~l 238 (299)
++...++|||.|++++.+ -.........+++.++.+.+
T Consensus 131 a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~ 171 (328)
T 2gjl_A 131 ALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL 171 (328)
T ss_dssp HHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc
Confidence 467889999999998752 11111123456677776544
No 77
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=89.10 E-value=1.3 Score=40.45 Aligned_cols=144 Identities=11% Similarity=0.109 Sum_probs=87.1
Q ss_pred HHHHhhcccccEEEeeCccccc-CC--hhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 022296 45 DIFESMGQFVDGLKFSGGSHSL-MP--KPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 45 DlLe~ag~yID~lKfg~GTs~l-~p--~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI 120 (299)
+.|..+| ||.+=+||+.+.- .| .+ ..+.++.+++. |+.+. .|. .+ .+-++.+.+.|.+.|-|
T Consensus 34 ~~L~~~G--v~~IE~g~~~~~~~~p~~~d-~~~~~~~~~~~~~~~~~--~l~-----~~----~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 34 DMLSEAG--LSVIETTSFVSPKWVPQMGD-HTEVLKGIQKFPGINYP--VLT-----PN----LKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp HHHHHTT--CSEECCEECCCTTTCGGGTT-HHHHHHHSCCCTTCBCC--EEC-----CS----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHcC--cCEEEECCCcCcccccccCC-HHHHHHHHhhCCCCEEE--EEc-----CC----HHhHHHHHHCCCCEEEE
Confidence 3444445 8899999876531 11 12 24444444443 44322 121 23 23477888899999999
Q ss_pred cCCcccCC------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 121 NVGSLEIP------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 121 SdGti~i~------------~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
+..+-+.- .+.-.+.|+.+++.|++|-- .+.. .++...+. .
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~--~l~~---~~~~~~~~----------------------~ 152 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRG--YVSC---ALGCPYEG----------------------K 152 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEE--EEET---TTCBTTTB----------------------S
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE--EEEE---EeeCCcCC----------------------C
Confidence 77554331 13445679999999998643 3321 11111110 1
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
.+++.+ ++.++...++||+.|- |+|..|-..+..+.++++.
T Consensus 153 ~~~~~~---~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~~ 193 (298)
T 2cw6_A 153 ISPAKV---AEVTKKFYSMGCYEIS-----LGDTIGVGTPGIMKDMLSA 193 (298)
T ss_dssp CCHHHH---HHHHHHHHHTTCSEEE-----EEETTSCCCHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHcCCCEEE-----ecCCCCCcCHHHHHHHHHH
Confidence 236778 8889999999999774 5677888888777777753
No 78
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.00 E-value=2.5 Score=40.31 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=98.6
Q ss_pred ccEEEeeCcccccCCh-----------hHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022296 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 54 ID~lKfg~GTs~l~p~-----------~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (299)
+|.+-+-..+|-++.+ +.+++-++.++++|..|..+ .|.+...+|+.+-+..+.+.+.|.+.|-+.|
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~--~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFS--CEDALRSEIDFLAEICGAVIEAGATTINIPD 178 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEE--EETGGGSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEe--cCCCCccCHHHHHHHHHHHHHcCCCEEEecC
Confidence 5666666666655432 23455788999999877654 2334445556777888889999999999999
Q ss_pred CcccCChhHHHHHHHHHHHcCCcc--cceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHH
Q 022296 123 GSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRR 200 (299)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v--~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 200 (299)
-.--+.+.+-.++|+.+++. +.. .-.+++.+.. | .... +-.
T Consensus 179 T~G~~~P~~~~~lv~~l~~~-~~~~~~~~l~~H~Hn-------d--------------------------~GlA---vAN 221 (370)
T 3rmj_A 179 TVGYSIPYKTEEFFRELIAK-TPNGGKVVWSAHCHN-------D--------------------------LGLA---VAN 221 (370)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-STTGGGSEEEEECBC-------T--------------------------TSCH---HHH
T ss_pred ccCCcCHHHHHHHHHHHHHh-CCCcCceEEEEEeCC-------C--------------------------CChH---HHH
Confidence 99999999999999999884 110 1235553221 1 2333 666
Q ss_pred HHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHH
Q 022296 201 AERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVI 235 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii 235 (299)
+...++|||+.| ++- |+=+..||.-.+.+-..+
T Consensus 222 ~laAv~aGa~~v--d~tv~GlGeraGN~~lE~vv~~L 256 (370)
T 3rmj_A 222 SLAALKGGARQV--ECTVNGLGERAGNASVEEIVMAL 256 (370)
T ss_dssp HHHHHHTTCCEE--EEBGGGCSSTTCBCBHHHHHHHH
T ss_pred HHHHHHhCCCEE--EEeccccCcccccccHHHHHHHH
Confidence 788999999965 664 888899999987665444
No 79
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.98 E-value=3.9 Score=38.14 Aligned_cols=92 Identities=11% Similarity=0.121 Sum_probs=64.5
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
.+++++.|.+.|.+.|-|.+-.-++ +.-.+.|+.+++.|+.| ++...+. +
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~s~~--~~~~~~i~~ak~~G~~v--~~~~~~a-----~--------------------- 144 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHCTEA--DVSKQHIEYARNLGMDT--VGFLMMS-----H--------------------- 144 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEETTCG--GGGHHHHHHHHHHTCEE--EEEEEST-----T---------------------
T ss_pred cHHHHHHHHhCCcCEEEEEEeccHH--HHHHHHHHHHHHCCCEE--EEEEEeC-----C---------------------
Confidence 4678999999999999997422211 45568999999999875 4444211 0
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
..+++.+ .+.++...++||+.|- |+|-.|...+..+.++++.
T Consensus 145 -----~~~~e~~---~~ia~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~ 186 (345)
T 1nvm_A 145 -----MIPAEKL---AEQGKLMESYGATCIY-----MADSGGAMSMNDIRDRMRA 186 (345)
T ss_dssp -----SSCHHHH---HHHHHHHHHHTCSEEE-----EECTTCCCCHHHHHHHHHH
T ss_pred -----CCCHHHH---HHHHHHHHHCCCCEEE-----ECCCcCccCHHHHHHHHHH
Confidence 0126777 8888999999999774 5677777777776666643
No 80
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=88.97 E-value=0.25 Score=43.42 Aligned_cols=150 Identities=12% Similarity=0.125 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccc-----cccccccCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDR-----AFGAYVARAP 175 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~-----~~~~~~~~~~ 175 (299)
.+++.++.++++||++||+.... ..++.++..++.+.+++.|+++..- +.-+..... .|. .+ ....|..
T Consensus 22 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~g~~~---~~~~~~~~~~-~~~~~~~ 96 (290)
T 3tva_A 22 GLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI-FGGFDGESY---ADIPTTARTV-GLVPLET 96 (290)
T ss_dssp SSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE-ECCCTTCCC---SSHHHHHHHS-SSCSTTT
T ss_pred CHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE-eeccCCccc---cccccccccc-CCCCHHH
Confidence 67888999999999999999743 3577888889999999999987552 211000000 000 00 0000110
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCC-C-ccc--HHHHHHH---HhccCCCceEEecC
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHA-D-SLR--ADIIAKV---IGRLGLEKTMFEAT 248 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~-G-~~r--~d~i~~i---i~~l~~eklifEAP 248 (299)
+ +..++.+ .+.++..-+.||..|++-+ |....+ . .++ .+.+.++ ++..|+ ++.+|.-
T Consensus 97 r-----------~~~~~~~---~~~i~~a~~lG~~~v~~~~-G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv-~l~lE~~ 160 (290)
T 3tva_A 97 R-----------ASRVAEM---KEISDFASWVGCPAIGLHI-GFVPESSSPDYSELVRVTQDLLTHAANHGQ-AVHLETG 160 (290)
T ss_dssp H-----------HHHHHHH---HHHHHHHHHHTCSEEEECC-CCCCCTTSHHHHHHHHHHHHHHHHHHTTTC-EEEEECC
T ss_pred H-----------HHHHHHH---HHHHHHHHHcCCCEEEEcC-CCCcccchHHHHHHHHHHHHHHHHHHHcCC-EEEEecC
Confidence 1 0113444 4445555667999999864 211111 0 110 1122223 334444 5666763
Q ss_pred --CchhHHHHHHHhC-CCcccccCCCC
Q 022296 249 --NPRTSEWFIRRYG-PKVNLFVDHSQ 272 (299)
Q Consensus 249 --~k~qQ~~fI~~fG-~~VNLgI~~~e 272 (299)
.+.+-..+++..| |+|-+-.|...
T Consensus 161 ~~~~~~~~~l~~~~~~~~~g~~~D~~h 187 (290)
T 3tva_A 161 QESADHLLEFIEDVNRPNLGINFDPAN 187 (290)
T ss_dssp SSCHHHHHHHHHHHCCTTEEEEECHHH
T ss_pred CCCHHHHHHHHHhcCCCCEEEEeccHH
Confidence 4567778999998 55555344433
No 81
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=88.94 E-value=1.6 Score=39.86 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+. +=++.-=+|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------------------- 77 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT------------------------- 77 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------------------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC-------------------------
Confidence 678889999999999996654443 78999999999999883 0011111122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCcccH
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRA 228 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r~ 228 (299)
...+..+. |+.++..-++|||.|++=.- -+|+. .-++..
T Consensus 78 ---------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~ 145 (291)
T 3tak_A 78 ---------GANSTREA---IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSN 145 (291)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCH
T ss_pred ---------CCCCHHHH---HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCH
Confidence 11125566 89999999999999998762 15653 235677
Q ss_pred HHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 229 DIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 229 d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
+.+.+++ +.+ +|+ =|+ .+..+...++++.++++.+.-- +|-+.+++|..|--|
T Consensus 146 ~~~~~La-~~p--nivgiK~ssgd~~~~~~~~~~~~~~f~v~~G-~d~~~~~~l~~G~~G 201 (291)
T 3tak_A 146 DTAVRLA-EIP--NIVGIKDATGDVPRGKALIDALNGKMAVYSG-DDETAWELMLLGADG 201 (291)
T ss_dssp HHHHHHT-TST--TEEEEEECSCCHHHHHHHHHHHTTSSEEEEC-CHHHHHHHHHTTCCE
T ss_pred HHHHHHH-cCC--CEEEEEeCCCCHHHHHHHHHHcCCCeEEEEC-cHHHHHHHHHCCCCE
Confidence 7888776 343 332 244 5666777788888888776433 345567888766444
No 82
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.94 E-value=2.8 Score=38.41 Aligned_cols=108 Identities=14% Similarity=0.271 Sum_probs=71.7
Q ss_pred cCCCCCCcchhHHHHHHHhhcc-cccEEEeeCccc-ccCChhHHH-----------------HHHHHHHhC--CceecCC
Q 022296 31 SPHYTLSSSHNVLEDIFESMGQ-FVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTG 89 (299)
Q Consensus 31 DkGl~~~~g~~~l~DlLe~ag~-yID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV~v~~G 89 (299)
=.|+ |.+..+.+++...-+ -.|++=+|.=-| .+.+-..++ +.++-.|+. ++++..=
T Consensus 27 ~aGd---P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm 103 (271)
T 3nav_A 27 TIGD---PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLL 103 (271)
T ss_dssp ETTS---SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred eCCC---CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3455 255666666665532 499999994321 122222333 344445544 3433322
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 90 tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
|++...+..| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+.+.+
T Consensus 104 ~Y~n~v~~~g---~~~f~~~~~~aGvdGvIip----Dlp~ee~~~~~~~~~~~gl~~I~ 155 (271)
T 3nav_A 104 MYANLVYARG---IDDFYQRCQKAGVDSVLIA----DVPTNESQPFVAAAEKFGIQPIF 155 (271)
T ss_dssp ECHHHHHHTC---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEE
T ss_pred ecCcHHHHHh---HHHHHHHHHHCCCCEEEEC----CCCHHHHHHHHHHHHHcCCeEEE
Confidence 6778877775 8999999999999999886 57778888999999999887544
No 83
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=88.88 E-value=1 Score=41.92 Aligned_cols=154 Identities=16% Similarity=0.232 Sum_probs=91.4
Q ss_pred HHHHHHHhhcccccEEEeeCccc----------ccCChhHHHHHHHHHHhCCc-eec----CCcH---HHHHHHhCCchH
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSH----------SLMPKPFIEEVVKRAHQHDV-YVS----TGDW---AEHLIRNGPSAF 103 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs----------~l~p~~~l~eKI~l~~~~gV-~v~----~Gtl---fE~a~~qg~~~~ 103 (299)
..--+++.+| +|.+=.|.... .++-.+.+..-=.+++.... .+. .|++ -|.++
T Consensus 45 ~sA~l~e~aG--~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~------- 115 (281)
T 1oy0_A 45 STARIFDEAG--IPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAAL------- 115 (281)
T ss_dssp HHHHHHHTTT--CCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHH-------
T ss_pred HHHHHHHHcC--CCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHH-------
Confidence 3445566665 78884443222 12233444444455555653 222 2443 23332
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
+--.+..++-|.++|-|-|| ++....|+.+.++|..|.-.+|..-. .+ ..++.|..-
T Consensus 116 ~na~rl~~eaGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPq--sv-----~~~ggf~v~---------- 172 (281)
T 1oy0_A 116 AAATRFLKDGGAHAVKLEGG------ERVAEQIACLTAAGIPVMAHIGFTPQ--SV-----NTLGGFRVQ---------- 172 (281)
T ss_dssp HHHHHHHHTTCCSEEEEEBS------GGGHHHHHHHHHHTCCEEEEEECCC-----------------------------
T ss_pred HHHHHHHHHhCCeEEEECCc------HHHHHHHHHHHHCCCCEEeeecCCcc--ee-----cccCCeEEE----------
Confidence 22456678899999999999 46688999999999988888887421 11 111111110
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
+- .+ ..+++ |++++...+|||+.|.+|+- ..++.++|.+.+++-
T Consensus 173 gr-t~-~a~~~---i~rA~a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 216 (281)
T 1oy0_A 173 GR-GD-AAEQT---IADAIAVAEAGAFAVVMEMV---------PAELATQITGKLTIP 216 (281)
T ss_dssp ---CH-HHHHH---HHHHHHHHHHTCSEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred eC-cH-HHHHH---HHHHHHHHHcCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 00 12 35777 99999999999999999982 245677777766643
No 84
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.85 E-value=2.5 Score=45.00 Aligned_cols=78 Identities=10% Similarity=0.074 Sum_probs=50.0
Q ss_pred hhHHHHHHHhh-cccccEEEee-----------CcccccCChhHHHHHHHHHHhC-CceecC-CcHHHHHHHhCCchHHH
Q 022296 40 HNVLEDIFESM-GQFVDGLKFS-----------GGSHSLMPKPFIEEVVKRAHQH-DVYVST-GDWAEHLIRNGPSAFKE 105 (299)
Q Consensus 40 ~~~l~DlLe~a-g~yID~lKfg-----------~GTs~l~p~~~l~eKI~l~~~~-gV~v~~-GtlfE~a~~qg~~~~~~ 105 (299)
+..+.++.+.+ ....|++=+- +|++.....+.+.+.++-.+++ +++|.. .. .+...+.+
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-------~~~~~~~~ 719 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-------PNVTDIVS 719 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-------SCSSCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-------CChHHHHH
Confidence 44555555544 2346666664 4555556778899999999887 655542 11 01124677
Q ss_pred HHHHHHHcCCCEEEecCCc
Q 022296 106 YVEDCKQVGFDTIELNVGS 124 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGt 124 (299)
+.+.+.+.|.|+|-+||.+
T Consensus 720 ~a~~~~~~G~d~i~v~Nt~ 738 (1025)
T 1gte_A 720 IARAAKEGGADGVTATNTV 738 (1025)
T ss_dssp HHHHHHHHTCSEEEECCCE
T ss_pred HHHHHHHcCCCEEEEeccc
Confidence 7888999999999998754
No 85
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.52 E-value=1.2 Score=40.91 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~-~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-= ++.-=+|+ .
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---g--------------------- 80 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---L--------------------- 80 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---C---------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---C---------------------
Confidence 67888999999999999887653 47999999999999998411 11111233 1
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
..+..+. |+.++..-++|||.|++=.-
T Consensus 81 ----------~~~t~~a---i~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 81 ----------VDSIEDA---ADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp ----------CSSHHHH---HHHHHHHHHTTCSEEEECCC
T ss_pred ----------CccHHHH---HHHHHHHHhcCCCEEEEcCC
Confidence 1124556 88899999999999998654
No 86
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=88.32 E-value=6.8 Score=40.74 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=101.2
Q ss_pred ccccEEEeeCcccccCChhHHHHHHHHHHhCCceec-----CCcHHHHHHHh--CCchHHHHHHHHHHcCCCEEEecCCc
Q 022296 52 QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRN--GPSAFKEYVEDCKQVGFDTIELNVGS 124 (299)
Q Consensus 52 ~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~GtlfE~a~~q--g~~~~~~yl~~~k~lGF~~IEISdGt 124 (299)
.=+|.+-+-..++ .-+.++.-++.++++|..+. +|.| |-.... +++.+-+..+.+.+.|.+.|=|-|-.
T Consensus 209 ~Gvd~irIf~s~n---~l~~l~~~i~~ak~~G~~v~~~i~~~~d~-~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~ 284 (718)
T 3bg3_A 209 NGMDVFRVFDSLN---YLPNMLLGMEAAGSAGGVVEAAISYTGDV-ADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMA 284 (718)
T ss_dssp HTCCEEEEECSSC---CHHHHHHHHHHHHTTTSEEEEEEECCSCT-TCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTT
T ss_pred cCcCEEEEEecHH---HHHHHHHHHHHHHHcCCeEEEEEEeeccc-cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcC
Confidence 3488888776444 45689999999999997642 3333 322211 22345566666778999999999999
Q ss_pred ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHH
Q 022296 125 LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERC 204 (299)
Q Consensus 125 i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d 204 (299)
--+.+.+-.++|+.++++ +. ...+++.+.. | .... +-.....
T Consensus 285 G~~~P~~v~~lV~~lk~~-~p-~~~I~~H~Hn-------d--------------------------~GlA---vANslaA 326 (718)
T 3bg3_A 285 GLLKPTACTMLVSSLRDR-FP-DLPLHIHTHD-------T--------------------------SGAG---VAAMLAC 326 (718)
T ss_dssp SCCCHHHHHHHHHHHHHH-ST-TCCEEEECCC-------T--------------------------TSCH---HHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHh-CC-CCeEEEEECC-------C--------------------------ccHH---HHHHHHH
Confidence 999999999999999984 10 2235553221 1 2233 5566889
Q ss_pred HHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 205 LEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 205 LeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
++|||+.|=.=-.|+=...||...+.+-..+...+.+
T Consensus 327 veAGa~~VD~ti~GlGertGN~~lE~vv~~L~~~g~~ 363 (718)
T 3bg3_A 327 AQAGADVVDVAADSMSGMTSQPSMGALVACTRGTPLD 363 (718)
T ss_dssp HHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred HHhCCCEEEecCcccccccCchhHHHHHHHHHhcCCC
Confidence 9999996533335888899999988877777665543
No 87
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=88.17 E-value=0.41 Score=44.98 Aligned_cols=138 Identities=17% Similarity=0.252 Sum_probs=79.8
Q ss_pred ccEEEeeCcccccC---------------------ChhHHHHHHHHHHhC-------CceecCCcHHHHHHHhCCchHHH
Q 022296 54 VDGLKFSGGSHSLM---------------------PKPFIEEVVKRAHQH-------DVYVSTGDWAEHLIRNGPSAFKE 105 (299)
Q Consensus 54 ID~lKfg~GTs~l~---------------------p~~~l~eKI~l~~~~-------gV~v~~GtlfE~a~~qg~~~~~~ 105 (299)
.|++.+=.+.-+|. ....+.|.|+-.++. +|++++..|.+--+ ..+...+
T Consensus 166 fDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~--~~~~~~~ 243 (349)
T 3hgj_A 166 FQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGW--SLEDTLA 243 (349)
T ss_dssp CCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSC--CHHHHHH
T ss_pred CCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC--CHHHHHH
Confidence 69998876653332 123456666666653 34666644432100 0013445
Q ss_pred HHHHHHHcCCCEEEecCCccc----C--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccc
Q 022296 106 YVEDCKQVGFDTIELNVGSLE----I--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTD 179 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~----i--~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~ 179 (299)
+.+.+.+.|.|+|+||+|... + ++.....+++.+++. +++. .--+| .
T Consensus 244 la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-------~~iP--Vi~~G---g--------------- 296 (349)
T 3hgj_A 244 FARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-------VGLR--TGAVG---L--------------- 296 (349)
T ss_dssp HHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-------HCCE--EEECS---S---------------
T ss_pred HHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-------cCce--EEEEC---C---------------
Confidence 667777889999999987542 1 232345677777763 2221 00000 0
Q ss_pred hhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 180 KLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
..+ .+.+++.|++| ||.|++ +|.+.. ..|++.++.+.++.+
T Consensus 297 ------i~t---------~e~a~~~l~~G~aD~V~i-GR~~la-----nPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 297 ------ITT---------PEQAETLLQAGSADLVLL-GRVLLR-----DPYFPLRAAKALGVA 338 (349)
T ss_dssp ------CCC---------HHHHHHHHHTTSCSEEEE-STHHHH-----CTTHHHHHHHHTTCC
T ss_pred ------CCC---------HHHHHHHHHCCCceEEEe-cHHHHh-----CchHHHHHHHHCCCC
Confidence 001 44568899999 999998 676553 257889999888843
No 88
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=87.55 E-value=3.3 Score=36.77 Aligned_cols=119 Identities=15% Similarity=0.209 Sum_probs=73.2
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (299)
+.+.+++.- +|++=+ +++.+.+++.+++-++.+|++|+.+.... . .. +..+.+.++|+|+|=++
T Consensus 93 ~i~~~~~~G---ad~V~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v--------~--t~-eea~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 93 DVDALAQAG---AAIIAV--DGTARQRPVAVEALLARIHHHHLLTMADC--------S--SV-DDGLACQRLGADIIGTT 156 (232)
T ss_dssp HHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC--------C--SH-HHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEE--CccccCCHHHHHHHHHHHHHCCCEEEEeC--------C--CH-HHHHHHHhCCCCEEEEc
Confidence 445555443 555533 34454444679999999999999877641 0 11 23456778999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhh
Q 022296 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINK 197 (299)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
. |... ....+ .++++++++.+..|..+-|+. +
T Consensus 157 ~~g~t~~~~~~~~~-~~~i~~l~~~~ipvIA~GGI~---t---------------------------------------- 192 (232)
T 3igs_A 157 MSGYTTPDTPEEPD-LPLVKALHDAGCRVIAEGRYN---S---------------------------------------- 192 (232)
T ss_dssp TTTSSSSSCCSSCC-HHHHHHHHHTTCCEEEESCCC---S----------------------------------------
T ss_pred CccCCCCCCCCCCC-HHHHHHHHhcCCcEEEECCCC---C----------------------------------------
Confidence 2 2211 11112 367777777566666666662 0
Q ss_pred HHHHHHHHHccCcEEEEecccccc
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCK 221 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d 221 (299)
.+.+.+.+++||+-|+| +..|++
T Consensus 193 ~~d~~~~~~~GadgV~V-Gsal~~ 215 (232)
T 3igs_A 193 PALAAEAIRYGAWAVTV-GSAITR 215 (232)
T ss_dssp HHHHHHHHHTTCSEEEE-CHHHHC
T ss_pred HHHHHHHHHcCCCEEEE-ehHhcC
Confidence 23347789999999999 566764
No 89
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=87.53 E-value=1.3 Score=40.61 Aligned_cols=79 Identities=14% Similarity=0.189 Sum_probs=55.5
Q ss_pred chhHHHHHHHhhcccccEEEee------------CcccccCChhHHHHHHHHHHhC-Cceec----CCcHHHHHHHhCCc
Q 022296 39 SHNVLEDIFESMGQFVDGLKFS------------GGSHSLMPKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPS 101 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg------------~GTs~l~p~~~l~eKI~l~~~~-gV~v~----~GtlfE~a~~qg~~ 101 (299)
.+..+.+..+.+-++.|.+-+- +|++.+-..+.+.+.++-.++. +++|. +| |-+ .+
T Consensus 69 ~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G-~~~------~~ 141 (318)
T 1vhn_A 69 EPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG-WEK------NE 141 (318)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC-SSS------CC
T ss_pred CHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC-CCh------HH
Confidence 3556666666666668888774 5666777788889999888774 54443 33 311 12
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL 125 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti 125 (299)
.+ ++.+.+.+.|.++|.|+.++-
T Consensus 142 ~~-~~a~~l~~~G~d~i~v~g~~~ 164 (318)
T 1vhn_A 142 VE-EIYRILVEEGVDEVFIHTRTV 164 (318)
T ss_dssp HH-HHHHHHHHTTCCEEEEESSCT
T ss_pred HH-HHHHHHHHhCCCEEEEcCCCc
Confidence 33 888999999999999998764
No 90
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=87.47 E-value=1.6 Score=40.91 Aligned_cols=98 Identities=17% Similarity=0.222 Sum_probs=60.7
Q ss_pred hhHHHHHHHhhccc-ccEEEee------------CcccccCChhHHHHHHHHHHh-CCceecC----CcHHHHHHHhCCc
Q 022296 40 HNVLEDIFESMGQF-VDGLKFS------------GGSHSLMPKPFIEEVVKRAHQ-HDVYVST----GDWAEHLIRNGPS 101 (299)
Q Consensus 40 ~~~l~DlLe~ag~y-ID~lKfg------------~GTs~l~p~~~l~eKI~l~~~-~gV~v~~----GtlfE~a~~qg~~ 101 (299)
+..+.+..+.+-++ .|++=+. +|++.+-..+.+.+.++-.++ .+++|.. | |-+. ....
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g-~~~~---~~~~ 144 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG-LEGK---ETYR 144 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC-BTTC---CCHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC-cCcc---ccHH
Confidence 34455544444333 5665554 567777888889999988887 3665543 4 2221 0001
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC----------ChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEI----------PEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i----------~~~~r~~lI~~~~~~ 142 (299)
...++.+.+.+.|.++|-|+.++-.. +.-+ ..+|+.+++.
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~-~~~i~~ik~~ 194 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR-HDWVHRLKGD 194 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC----------CCCCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCccc-HHHHHHHHHh
Confidence 35677888999999999999976421 1112 4678877773
No 91
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.21 E-value=1.6 Score=40.49 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=63.5
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
..+ -|.++|-|-|| ++....|+.+.++|..|.-.+|..-. + + ..++.|..- +-+
T Consensus 104 l~k-aGa~aVklEdg------~e~~~~I~al~~agIpV~gHiGLtPQ-s-~-----~~~ggf~v~----------grt-- 157 (275)
T 1o66_A 104 LMA-AGAHMVKLEGG------VWMAETTEFLQMRGIPVCAHIGLTPQ-S-V-----FAFGGYKVQ----------GRG-- 157 (275)
T ss_dssp HHH-TTCSEEEEECS------GGGHHHHHHHHHTTCCEEEEEESCGG-G-T-----TC----------------------
T ss_pred HHH-cCCcEEEECCc------HHHHHHHHHHHHcCCCeEeeeccCce-e-e-----cccCCeEEE----------eCh--
Confidence 344 89999999999 36788999999999998888886321 1 1 011111000 001
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
-..+++ |+++++..+|||+.|.+|+- ..+++++|.+.+++-
T Consensus 158 ~~a~~~---i~rA~a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 198 (275)
T 1o66_A 158 GKAQAL---LNDAKAHDDAGAAVVLMECV---------LAELAKKVTETVSCP 198 (275)
T ss_dssp -CHHHH---HHHHHHHHHTTCSEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred HHHHHH---HHHHHHHHHcCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 114677 99999999999999999982 245677777766643
No 92
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=87.19 E-value=0.83 Score=39.81 Aligned_cols=46 Identities=26% Similarity=0.243 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc----ccCChhHHHHHHHHHHHcCCccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS----LEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt----i~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
.+++.++.++++||++||+.... ..++.+...++.+.+++.|+++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 65 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEIT 65 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEE
T ss_pred CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEE
Confidence 45556666666666666663210 11233444555555555566544
No 93
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=87.09 E-value=6.6 Score=34.17 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=67.7
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecC---C--cHH----HHHHHhCCchHHHHHHHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G--DWA----EHLIRNGPSAFKEYVEDCK 111 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G--tlf----E~a~~qg~~~~~~yl~~~k 111 (299)
.+++.|+.+.+. .|.+=+.... ..+.+++.-++++++|+.++. + +++ +....+.-+.+++.++.|+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGG----LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTT----CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 567777776665 7888877653 245689999999999997752 2 121 1111111126889999999
Q ss_pred HcCCCEEEecCCcccC------Ch-------hHHHHHHHHHHHcCCccccee
Q 022296 112 QVGFDTIELNVGSLEI------PE-------ETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 112 ~lGF~~IEISdGti~i------~~-------~~r~~lI~~~~~~G~~v~~E~ 150 (299)
++|.+.|=+..|.... .. +...++.+.+++.|+++.-|-
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 166 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEP 166 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECC
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 9999999997664432 22 233445566777787755553
No 94
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.07 E-value=2.6 Score=39.09 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=97.8
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv------------------------ 99 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT------------------------ 99 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Confidence 368889999999999999775433 479999999999998883 0011101122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .-++.
T Consensus 100 ----------g~~st~ea---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~ 166 (314)
T 3qze_A 100 ----------GANSTREA---VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDML 166 (314)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCC
T ss_pred ----------CCcCHHHH---HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCC
Confidence 11125666 89999999999999998762 15654 34677
Q ss_pred HHHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ .+ +|+ =|+ ++-.+...+++..+++..+.--. |-+.+++|..|--|
T Consensus 167 ~~~~~~La~-~p--nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~-d~~~l~~l~~Ga~G 223 (314)
T 3qze_A 167 PETVERLSK-VP--NIIGIKEATGDLQRAKEVIERVGKDFLVYSGD-DATAVELMLLGGKG 223 (314)
T ss_dssp HHHHHHHHT-ST--TEEEEEECSCCHHHHHHHHHHSCTTSEEEESC-GGGHHHHHHTTCCE
T ss_pred HHHHHHHhc-CC--CEEEEEcCCCCHHHHHHHHHHcCCCeEEEecC-hHHHHHHHHCCCCE
Confidence 888888873 43 332 244 56677778888888887775333 34568888877544
No 95
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=87.04 E-value=2.4 Score=39.44 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=46.3
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec------CCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 79 ~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS------dGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+||+..+.. .| .-++.++.+|++|+++|-|. .|.-+ .+.-+++++.|+++||+|.-.|+.
T Consensus 15 ~e~~g~~~~~~--------~G--~~~d~~~ilk~~G~N~VRi~~w~~P~~g~~~--~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 15 EERAGVSYKNT--------NG--NAQPLENILAANGVNTVRQRVWVNPADGNYN--LDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp HHHTTCCCBCT--------TS--CBCCHHHHHHHTTCCEEEEEECSSCTTCTTS--HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHcCCEEECC--------CC--CcccHHHHHHHCCCCEEEEeeeeCCCCCcCC--HHHHHHHHHHHHHCCCEEEEEecc
Confidence 56677766652 12 23456888999999999994 44333 466778999999999999998876
Q ss_pred e
Q 022296 153 M 153 (299)
Q Consensus 153 K 153 (299)
.
T Consensus 83 s 83 (332)
T 1hjs_A 83 S 83 (332)
T ss_dssp S
T ss_pred C
Confidence 3
No 96
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=87.01 E-value=1 Score=38.82 Aligned_cols=47 Identities=13% Similarity=0.214 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+...... ++..+..++.+.+++.|+++..
T Consensus 17 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLAN 65 (281)
T ss_dssp CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECC
T ss_pred CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEE
Confidence 6889999999999999999865431 2345567788888999998754
No 97
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.95 E-value=1.8 Score=40.46 Aligned_cols=140 Identities=11% Similarity=0.060 Sum_probs=84.1
Q ss_pred HHHhhcccccEEEeeCcccccCChhHHHHHHHHHHh----CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022296 46 IFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 46 lLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~----~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (299)
.|..+| ||.+=.||+.+.-.+.+.+++..+.... -++.+. ++..+ . + .++.+.+.|.+.|-|.
T Consensus 50 ~L~~~G--v~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~-------~l~~~--~-~-~i~~a~~~g~~~v~i~ 116 (337)
T 3ble_A 50 LLQKLN--VDRVEIASARVSKGELETVQKIMEWAATEQLTERIEIL-------GFVDG--N-K-TVDWIKDSGAKVLNLL 116 (337)
T ss_dssp HHHTTC--CSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEE-------EESST--T-H-HHHHHHHHTCCEEEEE
T ss_pred HHHHcC--CCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEE-------EEccc--h-h-hHHHHHHCCCCEEEEE
Confidence 444445 7888888876533333556655553221 122221 22222 1 1 5788888999999986
Q ss_pred CCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCcc
Q 022296 122 VGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEI 189 (299)
Q Consensus 122 dGti~i------------~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
..+-++ ..+.-.+.|+.+++.|++|. +...+ .+ +. . ..
T Consensus 117 ~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~--~~~~~----~~---~~------------~---------~~ 166 (337)
T 3ble_A 117 TKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN--VYLED----WS---NG------------F---------RN 166 (337)
T ss_dssp EECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE--EEEET----HH---HH------------H---------HH
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE--EEEEE----CC---CC------------C---------cC
Confidence 543222 12455678899999998753 44421 00 00 0 02
Q ss_pred chhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 190 EVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 190 ~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
+++.+ ++.+++..++||+.|. |+|..|-..+..+.++++
T Consensus 167 ~~~~~---~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~ 205 (337)
T 3ble_A 167 SPDYV---KSLVEHLSKEHIERIF-----LPDTLGVLSPEETFQGVD 205 (337)
T ss_dssp CHHHH---HHHHHHHHTSCCSEEE-----EECTTCCCCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHcCCCEEE-----EecCCCCcCHHHHHHHHH
Confidence 26777 8889999999998774 577777777776666664
No 98
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=86.92 E-value=1.3 Score=40.82 Aligned_cols=96 Identities=15% Similarity=0.243 Sum_probs=64.8
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
..+ -|.++|-|-|| ++....|+.+.++|..|.-.+|..-. ....++.|..-. . .+
T Consensus 103 l~k-aGa~aVklEgg------~e~~~~I~al~~agipV~gHiGLtPq-------~v~~~ggf~v~g-r----------t~ 157 (264)
T 1m3u_A 103 VMR-AGANMVKIEGG------EWLVETVQMLTERAVPVCGHLGLTPQ-------SVNIFGGYKVQG-R----------GD 157 (264)
T ss_dssp HHH-TTCSEEECCCS------GGGHHHHHHHHHTTCCEEEEEESCGG-------GHHHHTSSCCCC-C----------SH
T ss_pred HHH-cCCCEEEECCc------HHHHHHHHHHHHCCCCeEeeecCCce-------eecccCCeEEEe-C----------CH
Confidence 344 89999999999 46788999999999888888887311 111111111100 0 11
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
-..+++ |+++++..+|||+.|.+|+- ..++.++|.+.+++-
T Consensus 158 ~~a~~~---i~rA~a~~eAGA~~ivlE~v---------p~~~a~~it~~l~iP 198 (264)
T 1m3u_A 158 EAGDQL---LSDALALEAAGAQLLVLECV---------PVELAKRITEALAIP 198 (264)
T ss_dssp HHHHHH---HHHHHHHHHHTCCEEEEESC---------CHHHHHHHHHHCSSC
T ss_pred HHHHHH---HHHHHHHHHCCCcEEEEecC---------CHHHHHHHHHhCCCC
Confidence 124677 99999999999999999982 245667777766643
No 99
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=86.88 E-value=2.5 Score=38.50 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ +|+ |.
T Consensus 20 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi--~Gv-------g~----------------- 73 (286)
T 2r91_A 20 LFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVI--VQV-------AS----------------- 73 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEE--EEC-------CC-----------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEE--Eee-------CC-----------------
Confidence 67888999999999999886543 47999999999999988410011 222 11
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
.+..+. |+.++..-++|||.|++=.-
T Consensus 74 ----------~~t~~a---i~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 74 ----------LNADEA---IALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp ----------SSHHHH---HHHHHHHHHTTCSEEEECCS
T ss_pred ----------CCHHHH---HHHHHHHHhcCCCEEEEcCC
Confidence 114556 88889999999999998553
No 100
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=86.84 E-value=3.3 Score=37.93 Aligned_cols=143 Identities=13% Similarity=0.054 Sum_probs=96.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+. +=++.-=+|+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------- 83 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT------------------------- 83 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC-------------------------
Confidence 678889999999999998755443 78999999999999883 0011111122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCcccH
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLRA 228 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r~ 228 (299)
...+..+. |+.++..-++|||.|++=.- -+|+. .-++..
T Consensus 84 ---------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~ 151 (297)
T 3flu_A 84 ---------GANNTVEA---IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTN 151 (297)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCH
T ss_pred ---------CCcCHHHH---HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCH
Confidence 11125566 89999999999999998762 15653 236677
Q ss_pred HHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 229 DIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 229 d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
+.+.++. +.+ +|+ =|+ .+-.+...++++.+++..+.-- +|-+.+++|..|--|
T Consensus 152 ~~~~~La-~~p--nivgiKdssgd~~~~~~~~~~~~~~f~v~~G-~d~~~l~~l~~G~~G 207 (297)
T 3flu_A 152 DTILRLA-EIP--NIVGVKEASGNIGSNIELINRAPEGFVVLSG-DDHTALPFMLCGGHG 207 (297)
T ss_dssp HHHHHHT-TST--TEEEEEECSCCHHHHHHHHHHSCTTCEEEEC-CGGGHHHHHHTTCCE
T ss_pred HHHHHHH-cCC--CEEEEEeCCCCHHHHHHHHHhcCCCeEEEEC-cHHHHHHHHhCCCCE
Confidence 8888776 343 332 244 5666777888888888777533 344567888866444
No 101
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=86.64 E-value=11 Score=34.41 Aligned_cols=170 Identities=18% Similarity=0.168 Sum_probs=100.3
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhccccc---EEEeeCcccccCC----hhHHHHHHHHHHhCCceecC--C-cH
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD---GLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVST--G-DW 91 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID---~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~v~~--G-tl 91 (299)
+..|++-++-+|. .+...+..++.+..|=+ .+..+.|-+.-.. ++.+.+..+++++..|.--. | .+
T Consensus 27 ~~~gV~~~v~~g~----~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaIGEiGLD~ 102 (287)
T 3rcm_A 27 LEAGVTQMLLTGT----SLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVGECGLDF 102 (287)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEEEEEEEET
T ss_pred HHcCCeEEEEecC----CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEEEEeeeCC
Confidence 4679999999998 56688888888888865 4777777665432 34466655666554432211 2 22
Q ss_pred H----HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022296 92 A----EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (299)
Q Consensus 92 f----E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~ 167 (299)
. ....++. .|.+-++.|+++|...+==+-. ..+ ++++.+++.+.. +.-++-...+ |
T Consensus 103 ~~~~~~~~~Q~~--~F~~ql~lA~e~~lPv~iH~r~----a~~---~~l~il~~~~~~--~~~~V~H~fs--G------- 162 (287)
T 3rcm_A 103 NRDFSPRPLQEK--ALEAQLTLAAQLRLPVFLHERD----ASE---RLLAILKDYRDH--LTGAVVHCFT--G------- 162 (287)
T ss_dssp TTCSSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHHTTGGG--CSCEEECSCC--C-------
T ss_pred CcccCcHHHHHH--HHHHHHHHHHHhCCCEEEEcCC----cHH---HHHHHHHHcCCC--CCeEEEEeCC--C-------
Confidence 1 1123333 6899999999999887632322 223 455555553321 1112321111 0
Q ss_pred cccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc-cccCCCcccHHHHHHHHhccCCCceEEe
Q 022296 168 GAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEKTMFE 246 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg-i~d~~G~~r~d~i~~ii~~l~~eklifE 246 (299)
+ .+.+++.++.|.+.=+- | ++.. -|...+.++++.+|++||++|
T Consensus 163 --------------------~---------~e~a~~~l~~G~yis~~---g~i~~~---k~~~~l~~~v~~ip~drlLlE 207 (287)
T 3rcm_A 163 --------------------E---------REALFAYLDLDLHIGIT---GWICDE---RRGTHLHPLVGNIPEGRLMLE 207 (287)
T ss_dssp --------------------C---------HHHHHHHHHTTCEEEEC---GGGGCT---TTCGGGHHHHTTSCTTSEEEC
T ss_pred --------------------C---------HHHHHHHHHCCcEEEEC---chhccc---cCHHHHHHHHHhcCCccEEEe
Confidence 1 44458889999654332 4 2221 122346788899999999999
Q ss_pred cCCc
Q 022296 247 ATNP 250 (299)
Q Consensus 247 AP~k 250 (299)
...|
T Consensus 208 TD~P 211 (287)
T 3rcm_A 208 SDAP 211 (287)
T ss_dssp CCTT
T ss_pred ccCC
Confidence 8755
No 102
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.57 E-value=1.4 Score=40.37 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=92.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCC
Q 022296 102 AFKEYVEDCKQ-VGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (299)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~ 175 (299)
.+.++++++-+ -|.+.|=+.-.| ..|+.++|.++++.+.+. | ++.-=.|+
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv----------------------- 80 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQV----------------------- 80 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-----------------------
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEec-----------------------
Confidence 57888999999 999999886543 479999999999999873 1 11111122
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-cc
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SL 226 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~ 226 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .| ++
T Consensus 81 -----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 146 (293)
T 1f6k_A 81 -----------GSVNLKEA---VELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNM 146 (293)
T ss_dssp -----------CCSCHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCC
T ss_pred -----------CCCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCC
Confidence 11124566 88899999999999998652 15663 23 57
Q ss_pred cHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 227 RADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 227 r~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
..+.+.++++ ..+|+- |+ .+-.+...+++. +++..+.--.++ +.+++|..|--|
T Consensus 147 ~~~~~~~La~---~pnIvgiK~s~gd~~~~~~~~~~-~~~f~v~~G~d~-~~~~~l~~G~~G 203 (293)
T 1f6k_A 147 GIEQFGELYK---NPKVLGVKFTAGDFYLLERLKKA-YPNHLIWAGFDE-MMLPAASLGVDG 203 (293)
T ss_dssp CHHHHHHHHT---STTEEEEEECSCCHHHHHHHHHH-CTTSEEEECCGG-GHHHHHHTTCSE
T ss_pred CHHHHHHHhc---CCCEEEEEECCCCHHHHHHHHHh-CCCeEEEECcHH-HHHHHHHCCCcE
Confidence 7888888863 344432 44 455566666665 566555433333 578888766443
No 103
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=86.45 E-value=2.5 Score=38.94 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=63.9
Q ss_pred CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCC
Q 022296 82 HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKS 157 (299)
Q Consensus 82 ~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~s 157 (299)
.||.+..=|.|-.=-.=+.+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 17 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv----- 91 (304)
T 3l21_A 17 GTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA----- 91 (304)
T ss_dssp CSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-----
T ss_pred CceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC-----
Confidence 4665554443311001112368889999999999999776443 479999999999999883 1011111122
Q ss_pred CCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEec
Q 022296 158 DIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDS 216 (299)
Q Consensus 158 evg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEa 216 (299)
...+..+. |+.++..-++|||.|++=.
T Consensus 92 -----------------------------g~~~t~~a---i~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 92 -----------------------------GTYDTAHS---IRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp -----------------------------CCSCHHHH---HHHHHHHHHHTCSEEEEEC
T ss_pred -----------------------------CCCCHHHH---HHHHHHHHHcCCCEEEECC
Confidence 11125566 8999999999999999976
No 104
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=86.40 E-value=1.6 Score=39.93 Aligned_cols=144 Identities=13% Similarity=0.051 Sum_probs=89.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv------------------------ 78 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT------------------------ 78 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Confidence 478889999999999999665433 4789999999999998831 011001122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .-++.
T Consensus 79 ----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~ 145 (292)
T 3daq_A 79 ----------GTNDTEKS---IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIE 145 (292)
T ss_dssp ----------CCSCHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCC
T ss_pred ----------CcccHHHH---HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCC
Confidence 11125566 88899999999999998762 14552 23566
Q ss_pred HHHHHHHHhccCCCceE--EecC-CchhHHHHHHHhCC-CcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTM--FEAT-NPRTSEWFIRRYGP-KVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~ekli--fEAP-~k~qQ~~fI~~fG~-~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++.+ . .+|+ =|+. +-.+...+++..++ +..+.--. |-+-+++|..|--|
T Consensus 146 ~~~~~~La~-~--pnivgiK~ssgd~~~~~~~~~~~~~~~f~v~~G~-d~~~~~~l~~G~~G 203 (292)
T 3daq_A 146 PETVEILSQ-H--PYIVALKDATNDFEYLEEVKKRIDTNSFALYSGN-DDNVVEYYQRGGQG 203 (292)
T ss_dssp HHHHHHHHT-S--TTEEEEEECCCCHHHHHHHHTTSCTTTSEEEESC-GGGHHHHHHTTCCE
T ss_pred HHHHHHHhc-C--CCEEEEEeCCCCHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHhcCCCE
Confidence 777777764 3 3332 2343 44555566666665 55554333 34456777755433
No 105
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.38 E-value=1.6 Score=39.85 Aligned_cols=143 Identities=15% Similarity=0.136 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv-------g---------------- 77 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT-------G---------------- 77 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-------C----------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec-------C----------------
Confidence 6788899999999999988654 3489999999999999873 2 11111222 1
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~r 227 (299)
..+..+. |+.++..-++|||.|++=.- -||+. .| ++.
T Consensus 78 -----------~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~ 143 (294)
T 2ehh_A 78 -----------GNATHEA---VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEIS 143 (294)
T ss_dssp -----------CSCHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCC
T ss_pred -----------CCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCC
Confidence 1124566 89999999999999998652 15663 23 678
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.+++++. .+|+- |+ .+-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 144 ~~~~~~La~~~--pnivgiKds~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (294)
T 2ehh_A 144 VDTMFKLASEC--ENIVASKESTPNMDRISEIVKRLGESFSVL-SGDDSLTLPMMALGAKG 201 (294)
T ss_dssp HHHHHHHHHHC--TTEEEEEECCSCHHHHHHHHHHHCTTSEEE-ESSGGGHHHHHHTTCCE
T ss_pred HHHHHHHHhhC--CCEEEEEeCCCCHHHHHHHHHhcCCCeEEE-ECcHHHHHHHHHCCCCE
Confidence 88888887344 44542 55 46667778888888776664 33455678888876444
No 106
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.34 E-value=3.6 Score=37.77 Aligned_cols=142 Identities=13% Similarity=0.131 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv------------------------ 88 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGT------------------------ 88 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCC------------------------
Confidence 6888999999999999988654 3489999999999999873 1 11111122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .| ++.
T Consensus 89 ----------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~ 155 (301)
T 1xky_A 89 ----------GSNNTHAS---IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQIS 155 (301)
T ss_dssp ----------CCSCHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCC
T ss_pred ----------CCCCHHHH---HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCC
Confidence 11125566 88999999999999998652 15653 23 567
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ ..+|+- |+ .+-.+...+++..+++..+. .-+|-+.+++|..|--|
T Consensus 156 ~~~~~~La~---~pnIvgiKdssgd~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 212 (301)
T 1xky_A 156 VDTVVRLSE---IENIVAIKDAGGDVLTMTEIIEKTADDFAVY-SGDDGLTLPAMAVGAKG 212 (301)
T ss_dssp HHHHHHHHT---STTEEEEEECSSCHHHHHHHHHHSCTTCEEE-ESSGGGHHHHHHTTCCE
T ss_pred HHHHHHHHc---CCCEEEEEcCCCCHHHHHHHHHhcCCCeEEE-ECcHHHHHHHHHcCCCE
Confidence 788888863 345543 44 45666777788887776654 33445678888866443
No 107
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.10 E-value=1.6 Score=40.26 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv------------------------ 87 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG-KIKLIAHV------------------------ 87 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-TSEEEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec------------------------
Confidence 6888999999999999988654 3489999999999999883 1 11111122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc---------------------c-----cccC---CC-cc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD---------------------D-----VCKH---AD-SL 226 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar---------------------g-----i~d~---~G-~~ 226 (299)
...+..+. |+.++..-++|||.|++=.- + ||+. .| ++
T Consensus 88 ----------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l 154 (303)
T 2wkj_A 88 ----------GCVSTAES---QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKL 154 (303)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCC
T ss_pred ----------CCCCHHHH---HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCC
Confidence 11124556 88899999999999998653 1 3442 23 45
Q ss_pred cHHHHHHHHhccCCCceEE--ecC-CchhHHHHHHHhCCCcccccCCCCchhhhhhhcc
Q 022296 227 RADIIAKVIGRLGLEKTMF--EAT-NPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGR 282 (299)
Q Consensus 227 r~d~i~~ii~~l~~eklif--EAP-~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~ 282 (299)
..+.+.++++ ..+|+- |+. +-.+...+++. ++++.+.--. |-+.+++|..|
T Consensus 155 ~~~~~~~La~---~pnIvgiK~s~gd~~~~~~~~~~-~~~f~v~~G~-d~~~~~~l~~G 208 (303)
T 2wkj_A 155 TLDQINTLVT---LPGVGALXQTSGDLYQMEQIRRE-HPDLVLYNGY-DNIFASGLLAG 208 (303)
T ss_dssp CHHHHHHHHT---STTEEEEEECCCCHHHHHHHHHH-CTTCEEEECC-GGGHHHHHHHT
T ss_pred CHHHHHHHhc---CCCEEEEeCCCCCHHHHHHHHHh-CCCeEEEeCc-HHHHHHHHHCC
Confidence 6666666653 234432 333 33444455554 5544443323 33456666654
No 108
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=86.03 E-value=2.4 Score=39.27 Aligned_cols=148 Identities=12% Similarity=0.146 Sum_probs=85.8
Q ss_pred HHHHHHhhcccccEEEeeCccccc-CCh-hHHHHHHHHHHh-CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022296 43 LEDIFESMGQFVDGLKFSGGSHSL-MPK-PFIEEVVKRAHQ-HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (299)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l-~p~-~~l~eKI~l~~~-~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (299)
+-+.|..+| ||.+=.||+.+.- .|. ..-.+.++.+++ -++.+. .| .++ .+=++.+.+.|.+.|-
T Consensus 33 i~~~L~~~G--v~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~--~l-----~~~----~~~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 33 WINQLSRTG--LSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYA--AL-----VPN----QRGLENALEGGINEAC 99 (307)
T ss_dssp HHHHHHTTT--CSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEE--EE-----CCS----HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHcC--CCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEE--EE-----eCC----HHhHHHHHhCCcCEEE
Confidence 344566666 7888888865431 110 012233333322 133322 12 233 2236777788999999
Q ss_pred ecCCcccC--------Ch----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCC
Q 022296 120 LNVGSLEI--------PE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (299)
Q Consensus 120 ISdGti~i--------~~----~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
|...+-++ +. +.-.+.|+.+++.|++|-..+..- ++...+ .
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~-----~~~~~~-------------~--------- 152 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTV-----FGCPYE-------------K--------- 152 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-----TCBTTT-------------B---------
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE-----ecCCcC-------------C---------
Confidence 97644332 22 334678999999999864322221 111111 0
Q ss_pred ccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 188 EIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 188 ~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
..+++.+ ++.+++..++||+.|. |+|..|-..+..+.++++.+
T Consensus 153 ~~~~~~~---~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~v~~lv~~l 195 (307)
T 1ydo_A 153 DVPIEQV---IRLSEALFEFGISELS-----LGDTIGAANPAQVETVLEAL 195 (307)
T ss_dssp CCCHHHH---HHHHHHHHHHTCSCEE-----EECSSCCCCHHHHHHHHHHH
T ss_pred CCCHHHH---HHHHHHHHhcCCCEEE-----EcCCCCCcCHHHHHHHHHHH
Confidence 1237788 8889999999999664 56788888887777776543
No 109
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.03 E-value=2.4 Score=39.70 Aligned_cols=96 Identities=14% Similarity=0.220 Sum_probs=66.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~ 171 (299)
+-+-.+...+.|..+|-|=|+.. -+|.++-++-|+.+++.| +.|-+. . ..|. +
T Consensus 106 v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~----~~~~I~---A----Rtda-~---- 169 (305)
T 3ih1_A 106 VARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA----PSLYIV---A----RTDA-R---- 169 (305)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC----TTSEEE---E----EECC-H----
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC----CCeEEE---E----eecc-c----
Confidence 33445666778999999999864 367788888888888873 234442 0 1110 0
Q ss_pred cCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCC
Q 022296 172 ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
.. -..++. |++++...+||||.|.+|+- ...+++.+|.+.++.
T Consensus 170 -----~~----------~g~~~a---i~Ra~ay~eAGAD~i~~e~~--------~~~~~~~~i~~~~~~ 212 (305)
T 3ih1_A 170 -----GV----------EGLDEA---IERANAYVKAGADAIFPEAL--------QSEEEFRLFNSKVNA 212 (305)
T ss_dssp -----HH----------HCHHHH---HHHHHHHHHHTCSEEEETTC--------CSHHHHHHHHHHSCS
T ss_pred -----cc----------cCHHHH---HHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHHcCC
Confidence 00 015677 99999999999999999984 135778888887764
No 110
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=86.03 E-value=1.5 Score=40.44 Aligned_cols=141 Identities=9% Similarity=0.040 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv------------------------- 90 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS------------------------- 90 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec-------------------------
Confidence 67888999999999999776544 369999999999999884 0010000122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc----------c-----------------cccC---CC-cc
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD----------D-----------------VCKH---AD-SL 226 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar----------g-----------------i~d~---~G-~~ 226 (299)
...+..+. |+.++..-++|||.|++=.- | ||+. .| ++
T Consensus 91 ---------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l 158 (307)
T 3s5o_A 91 ---------GCESTQAT---VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDL 158 (307)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC
T ss_pred ---------CCCCHHHH---HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCC
Confidence 11125566 88899999999999998431 1 4543 12 45
Q ss_pred cHHHHHHHHhccCCCceE--Eec-CCchhHHHHHHHh-CCCcccccCCCCchhhhhhhccc
Q 022296 227 RADIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRY-GPKVNLFVDHSQVMDLECLRGRN 283 (299)
Q Consensus 227 r~d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~f-G~~VNLgI~~~eVi~LE~LR~~~ 283 (299)
..+.+.++++ .+ +|+ =|+ .+-.+...++++. +++..+.--. |-+-+++|..|-
T Consensus 159 ~~~~~~~La~-~p--nIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~-d~~~l~~l~~G~ 215 (307)
T 3s5o_A 159 PVDAVVTLSQ-HP--NIVGMXDSGGDVTRIGLIVHKTRKQDFQVLAGS-AGFLMASYALGA 215 (307)
T ss_dssp CHHHHHHHHT-ST--TEEEEEECSCCHHHHHHHHHHTTTSSCEEEESS-GGGHHHHHHHTC
T ss_pred CHHHHHHHhc-CC--CEEEEEcCCCCHHHHHHHHHhccCCCeEEEeCc-HHHHHHHHHcCC
Confidence 6667776663 33 232 233 3445555666655 4566554333 234567776553
No 111
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=85.95 E-value=3.5 Score=37.35 Aligned_cols=62 Identities=3% Similarity=-0.059 Sum_probs=40.8
Q ss_pred EEEeeCcccc-------cCChhHHHHHHHHHHhC-CceecC---CcHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCC
Q 022296 56 GLKFSGGSHS-------LMPKPFIEEVVKRAHQH-DVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVG 123 (299)
Q Consensus 56 ~lKfg~GTs~-------l~p~~~l~eKI~l~~~~-gV~v~~---GtlfE~a~~qg~~~~~~yl~~~k~lG-F~~IEISdG 123 (299)
++=+.++|-. -.+.+.+.+.++-.++. ++++.- .+| ..+.+.++.+.+.+.| .|.|-+++.
T Consensus 125 ~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-------~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 125 LLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-------DIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp EEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC-------CHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred eEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC-------CHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 6666665332 22556677788777765 654432 122 1125777888999999 999999997
Q ss_pred c
Q 022296 124 S 124 (299)
Q Consensus 124 t 124 (299)
+
T Consensus 198 ~ 198 (314)
T 2e6f_A 198 V 198 (314)
T ss_dssp E
T ss_pred C
Confidence 7
No 112
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=85.87 E-value=1.8 Score=39.81 Aligned_cols=142 Identities=16% Similarity=0.117 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv------------------------ 76 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA------------------------ 76 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc------------------------
Confidence 6788899999999999987543 3489999999999999873 1 11111222
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .-++.
T Consensus 77 ----------g~~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~ 143 (297)
T 2rfg_A 77 ----------GSNNPVEA---VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIK 143 (297)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCC
T ss_pred ----------CCCCHHHH---HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCC
Confidence 11124566 88899999999999998652 15653 22567
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ . .+|+- |+ ++-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 144 ~~~~~~La~-~--pnIvgiKds~gd~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 200 (297)
T 2rfg_A 144 PETMARLAA-L--PRIVGVKDATTDLARISRERMLINKPFSFL-SGDDMTAIAYNASGGQG 200 (297)
T ss_dssp HHHHHHHHT-S--TTEEEEEECSCCTTHHHHHHTTCCSCCEEE-ESCGGGHHHHHHTTCCE
T ss_pred HHHHHHHHc-C--CCEEEEEeCCCCHHHHHHHHHhcCCCEEEE-eCcHHHHHHHHHCCCCE
Confidence 788888864 3 45542 55 45666677777777665553 23345577788766433
No 113
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=85.85 E-value=0.95 Score=40.39 Aligned_cols=47 Identities=21% Similarity=0.315 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--cccC-----ChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG--SLEI-----PEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG--ti~i-----~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+... .++. +.+...++.+.+++.|+++..
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEE
Confidence 7899999999999999999863 3332 345567888999999999754
No 114
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=85.72 E-value=19 Score=32.11 Aligned_cols=102 Identities=16% Similarity=0.257 Sum_probs=63.5
Q ss_pred hhHHHHHHHhhccc-ccEEEeeCccc-ccCChhHHH-----------------HHHHHHHhC--CceecCCcHHHHHHHh
Q 022296 40 HNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRN 98 (299)
Q Consensus 40 ~~~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~--gV~v~~GtlfE~a~~q 98 (299)
+..+.++++..-+. +|.+-+|.=-+ .+++-..+. +-++-.+++ ++++-.=+...-++..
T Consensus 30 ~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~ 109 (268)
T 1qop_A 30 IEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN 109 (268)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHh
Confidence 34555655555444 99999986221 122333333 445555655 3333210223334444
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
..++|++.|.+.|.|.|=+. +++.++..++++.++++|+++.+
T Consensus 110 ---g~~~~~~~~~~aGadgii~~----d~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 110 ---GIDAFYARCEQVGVDSVLVA----DVPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp ---CHHHHHHHHHHHTCCEEEET----TCCGGGCHHHHHHHHHTTCEEEC
T ss_pred ---hHHHHHHHHHHcCCCEEEEc----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 47999999999999988886 44557778899999999887533
No 115
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=85.69 E-value=2.2 Score=40.07 Aligned_cols=105 Identities=19% Similarity=0.314 Sum_probs=63.2
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCc-------------ccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccc
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGS-------------LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDR 165 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGt-------------i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~ 165 (299)
|+.+.+..+.+++.|||.|||+-|+ +.-..+.-.++|+.+++. ++ | +++|... |. ++
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~---P-V~vKiR~---g~-~~- 139 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRV---P-VTVKMRL---GL-EG- 139 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSS---C-EEEEEES---CB-TT-
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCC---c-eEEEEec---Cc-Cc-
Confidence 3467777778888999999999652 333445556677777763 32 2 5565321 11 11
Q ss_pred cccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc----cccC----CCcccHHHHHHHHhc
Q 022296 166 AFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD----VCKH----ADSLRADIIAKVIGR 237 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg----i~d~----~G~~r~d~i~~ii~~ 237 (299)
..+.+.. ++.++...++|++.|+|-+|. +.-. ......+.+.++.+.
T Consensus 140 ----------------------~~~~~~~---~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~ 194 (350)
T 3b0p_A 140 ----------------------KETYRGL---AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD 194 (350)
T ss_dssp ----------------------CCCHHHH---HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH
T ss_pred ----------------------cccHHHH---HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh
Confidence 0013345 677788889999999999872 2111 012356677777665
Q ss_pred c
Q 022296 238 L 238 (299)
Q Consensus 238 l 238 (299)
+
T Consensus 195 ~ 195 (350)
T 3b0p_A 195 F 195 (350)
T ss_dssp C
T ss_pred C
Confidence 5
No 116
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=85.66 E-value=2.1 Score=39.12 Aligned_cols=142 Identities=11% Similarity=0.080 Sum_probs=97.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.++++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv------------------------ 77 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK-RIPVIAGT------------------------ 77 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC------------------------
Confidence 6788899999999999988654 3489999999999999873 2 11111222
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc--------c-----------------cccC----CCccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--------D-----------------VCKH----ADSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--------g-----------------i~d~----~G~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- | ||+. .-++.
T Consensus 78 ----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~ 144 (291)
T 3a5f_A 78 ----------GSNNTAAS---IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNIT 144 (291)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCC
T ss_pred ----------CcccHHHH---HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCC
Confidence 11124566 89999999999999998652 1 4553 23577
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ ..+|+- |+ .+-.+...+++..++++.+. .-+|-+.+++|..|--|
T Consensus 145 ~~~~~~La~---~pnivgiK~s~gd~~~~~~~~~~~~~~f~v~-~G~d~~~~~~l~~G~~G 201 (291)
T 3a5f_A 145 PGTLKELCE---DKNIVAVXEASGNISQIAQIKALCGDKLDIY-SGNDDQIIPILALGGIG 201 (291)
T ss_dssp HHHHHHHTT---STTEEEEEECSCCHHHHHHHHHHHGGGSEEE-ESCGGGHHHHHHTTCCE
T ss_pred HHHHHHHHc---CCCEEEEeCCCCCHHHHHHHHHhcCCCeEEE-eCcHHHHHHHHHCCCCE
Confidence 888888863 345542 55 46667778888888766654 33455678888877444
No 117
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=85.66 E-value=8.3 Score=37.76 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL 125 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti 125 (299)
.+.+..+.|.+.|.|.|-+++++.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBS
T ss_pred HHHHHHHHHHHcCCCEEEEECCCc
Confidence 567788899999999999999987
No 118
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=85.51 E-value=18 Score=33.73 Aligned_cols=169 Identities=14% Similarity=0.182 Sum_probs=104.4
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhccccc----EEEeeCcccccCCh----h-HHHHHHHHHHhC--CceecC--
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD----GLKFSGGSHSLMPK----P-FIEEVVKRAHQH--DVYVST-- 88 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID----~lKfg~GTs~l~p~----~-~l~eKI~l~~~~--gV~v~~-- 88 (299)
+..|++-++-+|. .+...+..++.+..|=| .+..+.|-+...-. + .+.+..+++.++ .|.--.
T Consensus 62 ~~aGV~~ii~~g~----~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEi 137 (325)
T 3ipw_A 62 ERNGLSHIIITSG----CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEI 137 (325)
T ss_dssp HHTTEEEEEECCC----SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEE
T ss_pred HHcCCcEEEEccC----CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEee
Confidence 4679999999999 56689999999988865 77788886654322 1 567777777664 221111
Q ss_pred C-cHH-----HHHHHhCCchHHHHHHHHHH-cCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCC
Q 022296 89 G-DWA-----EHLIRNGPSAFKEYVEDCKQ-VGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPS 161 (299)
Q Consensus 89 G-tlf-----E~a~~qg~~~~~~yl~~~k~-lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~ 161 (299)
| .+. -...++. .|.+.++.|++ ++...|==+-.. .+ ++++.+++.+.... -|+-...+ |
T Consensus 138 GLD~~~~~~~~~~~Q~~--~F~~ql~lA~e~~~lPviiH~r~A----~~---d~l~iL~~~~~~~~--~gViH~Fs--G- 203 (325)
T 3ipw_A 138 GLDYERLQFSDKETQLS--GYRTLSILHQKYPYLPFFFHCRKS----WS---DLCQLNKELGYNGC--KGVVHCFD--G- 203 (325)
T ss_dssp EEETTCCSSSCHHHHHH--HHHHTHHHHHHCTTCCEEEEEESC----HH---HHHHHHHHTTCTTS--CEEECSCC--C-
T ss_pred ecCCCcCCCCCHHHHHH--HHHHHHHHHHHhhCCeEEEEeCch----HH---HHHHHHHhcCCCCC--cEEEEECC--C-
Confidence 2 221 1123444 79999999999 999877444322 23 45566666543311 13422221 1
Q ss_pred cccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 162 DRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 162 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
+ .+++++.|+.|. ++=+=+- ++. +.+.+ +++..+|++
T Consensus 204 --------------------------s---------~e~a~~~l~lG~-yis~~G~-~~k-----~~~~~-~~v~~iPld 240 (325)
T 3ipw_A 204 --------------------------T---------EEEMNQILNEGW-DIGVTGN-SLQ-----SIELL-NVMKQIPIE 240 (325)
T ss_dssp --------------------------C---------HHHHHHHHHTTC-EEEECSG-GGS-----SHHHH-HHHTTSCGG
T ss_pred --------------------------C---------HHHHHHHHhcCc-EEeeCcc-ccC-----cHHHH-HHHHhCCcc
Confidence 1 455688999994 4434332 332 13334 588999999
Q ss_pred ceEEecCCch
Q 022296 242 KTMFEATNPR 251 (299)
Q Consensus 242 klifEAP~k~ 251 (299)
+|+.|..-|-
T Consensus 241 rlLlETDaP~ 250 (325)
T 3ipw_A 241 RLHIETDCPY 250 (325)
T ss_dssp GEEECCCTTS
T ss_pred cEEEeCCCcc
Confidence 9999987653
No 119
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=85.44 E-value=3.3 Score=38.16 Aligned_cols=144 Identities=11% Similarity=0.087 Sum_probs=96.4
Q ss_pred chHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~ 175 (299)
+.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv----------------------- 88 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGA----------------------- 88 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC-----------------------
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcC-----------------------
Confidence 36888999999999999988654 3489999999999999873 1 11101122
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-cc
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SL 226 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~ 226 (299)
...+..+. |++++..-++|||.|++=.- -||+. .| ++
T Consensus 89 -----------g~~st~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 154 (306)
T 1o5k_A 89 -----------GTNSTEKT---LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNV 154 (306)
T ss_dssp -----------CCSCHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCC
T ss_pred -----------CCccHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCC
Confidence 11125566 88999999999999998652 15653 23 57
Q ss_pred cHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCC---CcccccCCCCchhhhhhhcccCC
Q 022296 227 RADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGP---KVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 227 r~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~---~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
..+.+.+++++. .+|+- |+ ++-.+...+++..++ ++.+. .-+|-+.+++|..|--|
T Consensus 155 ~~~~~~~La~~~--pnIvgiKdssgd~~~~~~~~~~~~~~~~~f~v~-~G~d~~~l~~l~~G~~G 216 (306)
T 1o5k_A 155 LPETAARIAADL--KNVVGIXEANPDIDQIDRTVSLTKQARSDFMVW-SGNDDRTFYLLCAGGDG 216 (306)
T ss_dssp CHHHHHHHHHHC--TTEEEEEECCCCHHHHHHHHHHHHHHCTTCEEE-ESSGGGHHHHHHHTCCE
T ss_pred CHHHHHHHHHhC--CCEEEEeCCCCCHHHHHHHHHhcCCCCCcEEEE-ECcHHHHHHHHHCCCCE
Confidence 788888887334 44543 44 456667777777765 65553 33445678888866433
No 120
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.36 E-value=3.2 Score=39.07 Aligned_cols=141 Identities=10% Similarity=0.082 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv------------------------ 107 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGT------------------------ 107 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec------------------------
Confidence 57888999999999999886543 479999999999999873 1 11111122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .| ++.
T Consensus 108 ----------g~~st~ea---i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~ 174 (343)
T 2v9d_A 108 ----------GGTNARET---IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLT 174 (343)
T ss_dssp ----------CSSCHHHH---HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCC
T ss_pred ----------CCCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCC
Confidence 11125566 89999999999999998652 15653 23 577
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhC---CCcccccCCCCchhhhhhhccc
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYG---PKVNLFVDHSQVMDLECLRGRN 283 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG---~~VNLgI~~~eVi~LE~LR~~~ 283 (299)
.+.+.+++++. .+|+- |+ .+-.+...+++..+ +++.+.- -+|-+-+++|..|-
T Consensus 175 ~e~~~~La~~~--pnIvgiKdssgd~~~~~~l~~~~~~~~~~f~v~~-G~D~~~l~~l~~Ga 233 (343)
T 2v9d_A 175 PALVKTLADSR--SNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLC-GYDDHLFNTLLLGG 233 (343)
T ss_dssp HHHHHHHHHHC--TTEEEEEECCSCHHHHHHHHHHHHHHCTTCEEEE-SSGGGHHHHHHTTC
T ss_pred HHHHHHHHHhC--CCEEEEEeCCCCHHHHHHHHHhcCCCCCCEEEEE-CcHHHHHHHHHCCC
Confidence 88888887334 34432 55 45667777888877 6666543 34455788888663
No 121
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.20 E-value=2.4 Score=38.67 Aligned_cols=137 Identities=9% Similarity=0.026 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ .|+ |.
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gVi--aGv-------g~----------------- 74 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLI--FQV-------GS----------------- 74 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEE--EEC-------CC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeE--Eee-------CC-----------------
Confidence 67888999999999999886543 47999999999999988410011 222 11
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc-CCCcccHHHHHHHHhccCCCceEEecCCc---hhHH
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIGRLGLEKTMFEATNP---RTSE 254 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d-~~G~~r~d~i~~ii~~l~~eklifEAP~k---~qQ~ 254 (299)
.+..+. |+.++..-++|||.|++=.--.+. .+-+---+-..+|++..++-=++.--|.. +-..
T Consensus 75 ----------~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~ 141 (288)
T 2nuw_A 75 ----------LNLNDV---MELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPP 141 (288)
T ss_dssp ----------SCHHHH---HHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCH
T ss_pred ----------CCHHHH---HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCH
Confidence 114556 888999999999999997653333 11111112234566666666666666632 2233
Q ss_pred HHHHHhCCCccc-cc--CCCCchhhhhhhc
Q 022296 255 WFIRRYGPKVNL-FV--DHSQVMDLECLRG 281 (299)
Q Consensus 255 ~fI~~fG~~VNL-gI--~~~eVi~LE~LR~ 281 (299)
..+.++ |+ || +..++-.+..++.
T Consensus 142 ~~~~~L----nIvgiKdssgd~~~~~~~~~ 167 (288)
T 2nuw_A 142 SILKSL----PVKGIKDTNQDLAHSLEYKL 167 (288)
T ss_dssp HHHTTT----TEEEEEECCSCHHHHHHHHH
T ss_pred HHHhcc----EEEEEEeCCCCHHHHHHHHh
Confidence 444444 55 33 3334555555543
No 122
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.14 E-value=2.1 Score=36.15 Aligned_cols=94 Identities=14% Similarity=0.062 Sum_probs=57.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
.+....++++..++++|++|+|++.+.-...+.+++.- +.+ ++++..+--+ .+ --+.|.+.+.+.|.|.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~---~~~~~~~i~~~l~~-----~d--i~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVK---KAHPDKIVFADMKT-----MD--AGELEADIAFKAGADL 80 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHH---HHSTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHH---HhCCCCeEEEEEEe-----cC--ccHHHHHHHHhCCCCE
Confidence 45688889999999999999999865434444444422 223 5554432000 01 1244677788888888
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCc
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSAGLK 145 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (299)
|-|..+.- .+.-.++++.+++.|..
T Consensus 81 v~vh~~~~---~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 81 VTVLGSAD---DSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp EEEETTSC---HHHHHHHHHHHHHHTCE
T ss_pred EEEeccCC---hHHHHHHHHHHHHcCCc
Confidence 87766543 23344566666666655
No 123
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.12 E-value=2 Score=39.19 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ |
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv-------g---------------- 77 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA-------G---------------- 77 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC-------C----------------
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC-------C----------------
Confidence 6788899999999999988654 3479999999999999873 2 11111222 1
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~r 227 (299)
..+..+. |+.++..-++|||.|++=.- -||+. .-++.
T Consensus 78 -----------~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~ 143 (289)
T 2yxg_A 78 -----------SNCTEEA---IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLE 143 (289)
T ss_dssp -----------CSSHHHH---HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCC
T ss_pred -----------CCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCC
Confidence 1124556 88899999999999998652 15553 22567
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.+++++. .+|+- |+ .+-.+...+++.. ++.+ ..-+|-+.+++|..|--|
T Consensus 144 ~~~~~~La~~~--pnivgiK~s~gd~~~~~~~~~~~--~f~v-~~G~d~~~~~~l~~G~~G 199 (289)
T 2yxg_A 144 PKTVKLLAEEY--SNISAVKEANPNLSQVSELIHDA--KITV-LSGNDELTLPIIALGGKG 199 (289)
T ss_dssp HHHHHHHHHHC--TTEEEEEECCSCTHHHHHHHHHT--CSEE-EESCGGGHHHHHHTTCCE
T ss_pred HHHHHHHHHhC--CCEEEEEeCCCCHHHHHHHHHhC--CeEE-EECcHHHHHHHHHCCCCE
Confidence 78888887333 34432 55 4556666677665 3333 334455678888866443
No 124
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.08 E-value=4.2 Score=36.02 Aligned_cols=119 Identities=17% Similarity=0.190 Sum_probs=72.4
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (299)
+.+.+++.- +|++=+ +++.+.+++.+++-++.+|++|+.+.... ... +..+.+.+.|+|+|=++
T Consensus 93 ~i~~~~~aG---ad~I~l--~~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 93 DVDALAQAG---ADIIAF--DASFRSRPVDIDSLLTRIRLHGLLAMADC----------STV-NEGISCHQKGIEFIGTT 156 (229)
T ss_dssp HHHHHHHHT---CSEEEE--ECCSSCCSSCHHHHHHHHHHTTCEEEEEC----------SSH-HHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEE--CccccCChHHHHHHHHHHHHCCCEEEEec----------CCH-HHHHHHHhCCCCEEEec
Confidence 444444443 455533 33444444679999999999999877641 012 22355678999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhh
Q 022296 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINK 197 (299)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
. |... ....+ .++++.+++.+..|..|-|+. +
T Consensus 157 ~~g~t~~~~~~~~~-~~li~~l~~~~ipvIA~GGI~---t---------------------------------------- 192 (229)
T 3q58_A 157 LSGYTGPITPVEPD-LAMVTQLSHAGCRVIAEGRYN---T---------------------------------------- 192 (229)
T ss_dssp TTTSSSSCCCSSCC-HHHHHHHHTTTCCEEEESSCC---S----------------------------------------
T ss_pred CccCCCCCcCCCCC-HHHHHHHHHcCCCEEEECCCC---C----------------------------------------
Confidence 2 2211 11112 367777776566666666662 0
Q ss_pred HHHHHHHHHccCcEEEEecccccc
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCK 221 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d 221 (299)
.+.+++.+++||+-|+| +..|++
T Consensus 193 ~~d~~~~~~~GadgV~V-Gsai~~ 215 (229)
T 3q58_A 193 PALAANAIEHGAWAVTV-GSAITR 215 (229)
T ss_dssp HHHHHHHHHTTCSEEEE-CHHHHC
T ss_pred HHHHHHHHHcCCCEEEE-chHhcC
Confidence 23347889999999999 555664
No 125
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=84.97 E-value=3.2 Score=38.15 Aligned_cols=143 Identities=10% Similarity=0.092 Sum_probs=85.9
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEe
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg-~~~~~~yl~~~k~lGF~~IEI 120 (299)
.+-+.|..+| +|.+=.||..+.=.+.+.+++..+.. -++.++. +.++ +..++..++..+..|.+.|-|
T Consensus 31 ~i~~~L~~~G--v~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~-------l~~~~~~di~~a~~~~~~ag~~~v~i 99 (293)
T 3ewb_X 31 QIALQLEKLG--IDVIEAGFPISSPGDFECVKAIAKAI--KHCSVTG-------LARCVEGDIDRAEEALKDAVSPQIHI 99 (293)
T ss_dssp HHHHHHHHHT--CSEEEEECGGGCHHHHHHHHHHHHHC--CSSEEEE-------EEESSHHHHHHHHHHHTTCSSEEEEE
T ss_pred HHHHHHHHcC--CCEEEEeCCCCCccHHHHHHHHHHhc--CCCEEEE-------EecCCHHHHHHHHHHHhhcCCCEEEE
Confidence 4445566666 77888888665322333444433322 2343321 1111 114666677777789998887
Q ss_pred cCCccc--------CChh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 121 NVGSLE--------IPEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 121 SdGti~--------i~~~----~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
...+-+ .+.+ .-.+.|+.+++.|+.|. |+..+. . .
T Consensus 100 ~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~--~~~~d~-----~--------------------------~ 146 (293)
T 3ewb_X 100 FLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQ--FSPEDA-----T--------------------------R 146 (293)
T ss_dssp EEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEE--EEEETG-----G--------------------------G
T ss_pred EecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEE--EEeccC-----C--------------------------C
Confidence 654432 2222 34577888899887753 444210 0 0
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
.+++.+ ++.+++..++||+.| .|+|..|-..+..+.++++
T Consensus 147 ~~~~~~---~~~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~ 186 (293)
T 3ewb_X 147 SDRAFL---IEAVQTAIDAGATVI-----NIPDTVGYTNPTEFGQLFQ 186 (293)
T ss_dssp SCHHHH---HHHHHHHHHTTCCEE-----EEECSSSCCCHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHcCCCEE-----EecCCCCCCCHHHHHHHHH
Confidence 126777 888999999999976 4788888888877776664
No 126
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=84.90 E-value=4.9 Score=34.64 Aligned_cols=92 Identities=7% Similarity=-0.025 Sum_probs=56.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC--CceecC-CcHHHHHHHhCCchHHHHHHHHHHcCC
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGF 115 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF 115 (299)
.+....++++..+.++|++|+|+=-..-...+.+++ .+++ +.++.. .-+.+ .-..|.+.|.+.|.
T Consensus 17 ~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~~----lr~~~~~~~i~ld~~l~d--------~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 17 NLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVST----LRHNHPNHILVCDMKTTD--------GGAILSRMAFEAGA 84 (218)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHH----HHHHCTTSEEEEEEEECS--------CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHHH----HHHhCCCCcEEEEEeecc--------cHHHHHHHHHhcCC
Confidence 566777888888889999999952111122333333 3333 444432 11211 11347789999999
Q ss_pred CEEEecCCcccCChhHHHHHHHHHHHcCCc
Q 022296 116 DTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (299)
Q Consensus 116 ~~IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (299)
|.|-+-+-.. .+...++++.+++.|.+
T Consensus 85 d~i~vh~~~~---~~~~~~~~~~~~~~g~~ 111 (218)
T 3jr2_A 85 DWITVSAAAH---IATIAACKKVADELNGE 111 (218)
T ss_dssp SEEEEETTSC---HHHHHHHHHHHHHHTCE
T ss_pred CEEEEecCCC---HHHHHHHHHHHHHhCCc
Confidence 9998876542 34456788888887654
No 127
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=84.72 E-value=1 Score=39.46 Aligned_cols=108 Identities=11% Similarity=0.117 Sum_probs=68.4
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-c------HHHH-------------HHHhCCc
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WAEH-------------LIRNGPS 101 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-t------lfE~-------------a~~qg~~ 101 (299)
..=+.+..+| .|.+=+.+......+++.+++..++++++|+.+..- . +... ...+.-+
T Consensus 25 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 25 VHLEVAQDLK--VPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp BCHHHHHHTT--CSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHHcC--CCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 4444455555 677777765444455677999999999999976542 1 1110 0000012
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hhH-------HHHHHHHHHHcCCcccceee
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EET-------LLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~~-------r~~lI~~~~~~G~~v~~E~g 151 (299)
.+++.++.|+++|.+.|=+..|...-. .+. ..++.+.+++.|+++.-|-.
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 689999999999999999987765322 222 34455667777887655554
No 128
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=84.60 E-value=6.6 Score=38.28 Aligned_cols=74 Identities=9% Similarity=0.170 Sum_probs=47.0
Q ss_pred HHHHH---HhhcccccEEEeeCcc------cccCChhHHHHHHHHHHhC---------------------Cce-----ec
Q 022296 43 LEDIF---ESMGQFVDGLKFSGGS------HSLMPKPFIEEVVKRAHQH---------------------DVY-----VS 87 (299)
Q Consensus 43 l~DlL---e~ag~yID~lKfg~GT------s~l~p~~~l~eKI~l~~~~---------------------gV~-----v~ 87 (299)
.+|++ +...+|.|++=+=.+| ..+..++.+.+.++-.++. .++ +.
T Consensus 198 ~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~ 277 (415)
T 3i65_A 198 VDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA 277 (415)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEec
Confidence 45544 4456777887766544 4466777777777666553 233 34
Q ss_pred CC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 022296 88 TG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (299)
Q Consensus 88 ~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti 125 (299)
|+ +. +.+.+..+.|.+.|.|.|-++|.+.
T Consensus 278 pd~~~---------~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 278 PDLNQ---------EQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SCCCH---------HHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CCCCH---------HHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 54 21 1567888889999999999999876
No 129
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=84.57 E-value=0.82 Score=39.98 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccce
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E 149 (299)
.+++.++.++++||++||+. +.. + +..++-+.+++.|+++..-
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~-~~~--~--~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVG-GFF--P--GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCC-TTC--C--CHHHHHHHHHHTTCEECEE
T ss_pred CHHHHHHHHHHhCCCEEEec-CCC--C--CHHHHHHHHHHCCCeEEEE
Confidence 58888999999999999998 332 3 5567778888888887653
No 130
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=84.54 E-value=2.6 Score=38.59 Aligned_cols=77 Identities=18% Similarity=0.119 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.-=.|+ +|+ |.
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gvi--aGv-------g~----------------- 74 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKII--FQV-------GG----------------- 74 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEE--EEC-------CC-----------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEE--Eec-------CC-----------------
Confidence 57888999999999999886543 47999999999999998410011 222 11
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
.+..+. |+.++..-++|||.|++=.-
T Consensus 75 ----------~~t~~a---i~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 75 ----------LNLDDA---IRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp ----------SCHHHH---HHHHHHGGGSCCSEEEEECC
T ss_pred ----------CCHHHH---HHHHHHHHhcCCCEEEEcCC
Confidence 114556 88899999999999998654
No 131
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.53 E-value=1.7 Score=39.67 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.++++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv------------------------ 77 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT------------------------ 77 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec------------------------
Confidence 5788899998999999988654 3489999999999999873 2 11111222
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~r 227 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .| ++.
T Consensus 78 ----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~ 144 (292)
T 2ojp_A 78 ----------GANATAEA---ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLL 144 (292)
T ss_dssp ----------CCSSHHHH---HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCC
T ss_pred ----------CCccHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCC
Confidence 11124566 88999999999999998652 15653 23 567
Q ss_pred HHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ ..+|+- |+ ++-.+...+++..++++.+.-- +|-+.+++|..|--|
T Consensus 145 ~~~~~~La~---~pnivgiK~s~gd~~~~~~~~~~~~~~f~v~~G-~d~~~~~~l~~G~~G 201 (292)
T 2ojp_A 145 PETVGRLAK---VKNIIGIXEATGNLTRVNQIKELVSDDFVLLSG-DDASALDFMQYGGHG 201 (292)
T ss_dssp HHHHHHHHT---STTEEEC-CCSCCTHHHHHHHTTSCTTSBCEES-CGGGHHHHHHTTCCE
T ss_pred HHHHHHHHc---CCCEEEEeCCCCCHHHHHHHHHhcCCCEEEEEC-cHHHHHHHHHCCCcE
Confidence 788888763 345543 44 4566666777777776665433 344567888766433
No 132
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=84.50 E-value=2.8 Score=39.02 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=63.0
Q ss_pred HHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCC
Q 022296 107 VEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~ 175 (299)
.+..-+.|..+|-|-||.. =+|.++.++-|+.+++.+- .+.|-++- ..|. +
T Consensus 100 v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~--~~~~~i~a-------Rtda-~-------- 161 (295)
T 1xg4_A 100 VKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMA-------RTDA-L-------- 161 (295)
T ss_dssp HHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS--STTSEEEE-------EECC-H--------
T ss_pred HHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc--CCCcEEEE-------ecHH-h--------
Confidence 3444457999999999962 3788888888888888643 23344420 0110 0
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
| . -..+++ |++++...+||||.|.+|+. ...+++.+|.+.++
T Consensus 162 ~-~----------~gl~~a---i~ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~ 203 (295)
T 1xg4_A 162 A-V----------EGLDAA---IERAQAYVEAGAEMLFPEAI--------TELAMYRQFADAVQ 203 (295)
T ss_dssp H-H----------HCHHHH---HHHHHHHHHTTCSEEEETTC--------CSHHHHHHHHHHHC
T ss_pred h-h----------cCHHHH---HHHHHHHHHcCCCEEEEeCC--------CCHHHHHHHHHHcC
Confidence 0 0 014677 99999999999999999985 13567777777666
No 133
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=84.37 E-value=2.3 Score=39.34 Aligned_cols=160 Identities=13% Similarity=-0.008 Sum_probs=96.4
Q ss_pred CCceecCCcHHHH-HHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeecCC
Q 022296 82 HDVYVSTGDWAEH-LIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNK 156 (299)
Q Consensus 82 ~gV~v~~GtlfE~-a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~ 156 (299)
.||.+..=|.|-- --.=+.+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 13 ~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv---- 88 (316)
T 3e96_A 13 ETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI---- 88 (316)
T ss_dssp SSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE----
T ss_pred CceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe----
Confidence 5665555554411 001112368889999999999999876544 589999999999999884 0011111122
Q ss_pred CCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------
Q 022296 157 SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD------------------- 217 (299)
Q Consensus 157 sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar------------------- 217 (299)
| . +..+. |+.++..-++|||.|++=.-
T Consensus 89 ----------------------------g--~-~t~~a---i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~ 134 (316)
T 3e96_A 89 ----------------------------G--Y-ATSTA---IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIE 134 (316)
T ss_dssp ----------------------------C--S-SHHHH---HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHH
T ss_pred ----------------------------C--c-CHHHH---HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHH
Confidence 0 0 14555 88889999999999998531
Q ss_pred ------ccccCCCcccHHHHHHHHhccCCCceE--Eec-CCchhHHHHHHHhCC-Ccc-cccCCCCchhhhhhhcc
Q 022296 218 ------DVCKHADSLRADIIAKVIGRLGLEKTM--FEA-TNPRTSEWFIRRYGP-KVN-LFVDHSQVMDLECLRGR 282 (299)
Q Consensus 218 ------gi~d~~G~~r~d~i~~ii~~l~~ekli--fEA-P~k~qQ~~fI~~fG~-~VN-LgI~~~eVi~LE~LR~~ 282 (299)
-+|+..-++-.+.+.+++ +.| +|+ =|+ ++-.+...+++..++ +.. +.--.++.+.++.|..|
T Consensus 135 a~~lPiilYn~g~~l~~~~~~~La-~~p--nIvgiKdssgd~~~~~~~~~~~~~~~f~~v~~G~d~~~~~~~l~~G 207 (316)
T 3e96_A 135 ALDFPSLVYFKDPEISDRVLVDLA-PLQ--NLVGVKYAINDLPRFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAG 207 (316)
T ss_dssp HHTSCEEEEECCTTSCTHHHHHHT-TCT--TEEEEEECCCCHHHHHHHHTTSCGGGCCEEEETTCTTTHHHHHHHT
T ss_pred hCCCCEEEEeCCCCCCHHHHHHHH-cCC--CEEEEEeCCCCHHHHHHHHHhcCCCCceEEEeCChHHHHHHHHHCC
Confidence 156643356667777775 333 332 233 455666667766665 554 44334455555555544
No 134
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=84.36 E-value=2.7 Score=43.05 Aligned_cols=90 Identities=17% Similarity=0.327 Sum_probs=57.8
Q ss_pred hcccccEEEeeCccc----ccCChhHHHHHHHHHHhCCceecCCc-------------HHHHHHHhCCc----hHHHHHH
Q 022296 50 MGQFVDGLKFSGGSH----SLMPKPFIEEVVKRAHQHDVYVSTGD-------------WAEHLIRNGPS----AFKEYVE 108 (299)
Q Consensus 50 ag~yID~lKfg~GTs----~l~p~~~l~eKI~l~~~~gV~v~~Gt-------------lfE~a~~qg~~----~~~~yl~ 108 (299)
.=+|||..=. |+-+ .+.|+. -.-|+.||+|||+|. || |++-++.++.+ -+++.++
T Consensus 88 ~W~yvD~fvy-fshs~~~~~~~~P~--~~widaAHrnGV~Vl-Gt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~ 163 (626)
T 2vtf_A 88 YWHYTDLMVY-WAGSAGEGIIVPPS--ADVIDASHRNGVPIL-GNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLE 163 (626)
T ss_dssp CGGGCSEEEE-CCCBTTTBSEECCC--HHHHHHHHHTTCCEE-EEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHH
T ss_pred cccceeeeee-ecCCCccceeeCCC--cHHHHHHHHcCCEEE-EEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHH
Confidence 3468997643 4322 333422 357899999999886 32 45566645432 2799999
Q ss_pred HHHHcCCCEEEecCCcccCChhHH---HHHHHHHHHcC
Q 022296 109 DCKQVGFDTIELNVGSLEIPEETL---LRYVRLVKSAG 143 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r---~~lI~~~~~~G 143 (299)
.|+.+|||.+=|+-=+-.++.+.. ..+++.+++.+
T Consensus 164 ~a~~yGFDGw~IN~E~~~~~~~~~~~l~~F~~~L~~~~ 201 (626)
T 2vtf_A 164 VADYYGFDGWFINQQTEGADEGTAEAMQAFLVYLQEQK 201 (626)
T ss_dssp HHHHHTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCceEEeeccccCCHHHHHHHHHHHHHHHHhC
Confidence 999999999888765534555443 44555556543
No 135
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=84.24 E-value=6.9 Score=35.81 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=94.3
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~ 175 (299)
+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. |-++.-=+|+
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv----------------------- 84 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA----------------------- 84 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC-----------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC-----------------------
Confidence 368889999999999999775443 479999999999999884 1011111122
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC----CCcc
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH----ADSL 226 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~----~G~~ 226 (299)
...+..+. |+.++..-++|||.|++=.- -||+. .-++
T Consensus 85 -----------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 150 (301)
T 3m5v_A 85 -----------GSNATHEA---VGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEI 150 (301)
T ss_dssp -----------CCSSHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCC
T ss_pred -----------CCCCHHHH---HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC
Confidence 11125566 89999999999999999762 14553 2366
Q ss_pred cHHHHHHHHhccC-CCceEEecCCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 227 RADIIAKVIGRLG-LEKTMFEATNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 227 r~d~i~~ii~~l~-~eklifEAP~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
..+.+.++++..| +-=+=...++-.+...+++.. +++.+.-- +|-+.+++|..|--|
T Consensus 151 ~~~~~~~La~~~pnivgiKdssgd~~~~~~~~~~~-~~f~v~~G-~d~~~~~~l~~G~~G 208 (301)
T 3m5v_A 151 STDTIIKLFRDCENIYGVKEASGNIDKCVDLLAHE-PRMMLISG-EDAINYPILSNGGKG 208 (301)
T ss_dssp CHHHHHHHHHHCTTEEEEEECSSCHHHHHHHHHHC-TTSEEEEC-CGGGHHHHHHTTCCE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHhC-CCeEEEEc-cHHHHHHHHHcCCCE
Confidence 7778887775323 111112334666677777777 76666433 344567888766433
No 136
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=84.12 E-value=4.6 Score=37.46 Aligned_cols=111 Identities=9% Similarity=0.043 Sum_probs=67.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G-~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+.- =++.-=+|+
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------- 87 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV------------------------- 87 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------------------------
Confidence 688889999999999998765443 699999999999998831 011101122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccC--CCcccHHHHHHHHhccCCCceEEecCC
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKH--ADSLRADIIAKVIGRLGLEKTMFEATN 249 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~--~G~~r~d~i~~ii~~l~~eklifEAP~ 249 (299)
...+..+. |+.++..-++|||.|++=.--.|.. +.+---+-...|++..++-=++.--|.
T Consensus 88 ---------g~~~t~~a---i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 88 ---------GAHSTRQV---LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred ---------CCCCHHHH---HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 11125566 8889999999999999855322221 101111223344444555555555553
No 137
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=83.70 E-value=3.4 Score=37.74 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=22.2
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 199 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
+.+++.+++||+-|+| ++.|++.. ++ ...+.++++
T Consensus 226 edv~~l~~~GadgvlV-Gsal~~a~-dp-~~~~~~l~~ 260 (272)
T 3qja_A 226 ADLLAYAGAGADAVLV-GEGLVTSG-DP-RAAVADLVT 260 (272)
T ss_dssp HHHHHHHHTTCSEEEE-CHHHHTCS-CH-HHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEE-cHHHhCCC-CH-HHHHHHHHh
Confidence 4447889999999998 34466655 21 334455554
No 138
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=83.69 E-value=13 Score=34.91 Aligned_cols=195 Identities=15% Similarity=0.172 Sum_probs=111.4
Q ss_pred hhHHHHHHHhhccc--ccEEEeeCcccccCChhHHHHHHHHHHh--CCceecC----CcHHHHHHHhCCchHHHHHHHHH
Q 022296 40 HNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQ--HDVYVST----GDWAEHLIRNGPSAFKEYVEDCK 111 (299)
Q Consensus 40 ~~~l~DlLe~ag~y--ID~lKfg~GTs~l~p~~~l~eKI~l~~~--~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k 111 (299)
...++.+++.|-+- ==+|-++-|+...++.+.+...+..+.+ ++|+|+. |.-+ +.+..|-
T Consensus 27 ~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~------------e~~~~ai 94 (307)
T 3n9r_A 27 FEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTF------------ESCEKAV 94 (307)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSH------------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCH------------HHHHHHH
Confidence 34455555544321 0134555555444555566666655544 5677764 3333 3445677
Q ss_pred HcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCcc
Q 022296 112 QVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEI 189 (299)
Q Consensus 112 ~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
+.||+.|=|.--..++.+- .=.++++.++..|.-|--|+|.=-+ .+|. +....-+..+|
T Consensus 95 ~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG------~Ed~-----~~~~~~~~~yT-------- 155 (307)
T 3n9r_A 95 KAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMG------IEDN-----ISVDEKDAVLV-------- 155 (307)
T ss_dssp HHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCC------C---------------CCSC--------
T ss_pred HhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecc------ccCC-----cccccccccCC--------
Confidence 8999999996554443321 2236788888999999999998311 1220 00000001111
Q ss_pred chhhhhhhHHHHHHHH-HccCcEEEEe---ccccccC--CCcccHHHHHHHHhccCCCceEEecC--CchhHHHHHHHhC
Q 022296 190 EVGVGINKSRRAERCL-EAGADMIMID---SDDVCKH--ADSLRADIIAKVIGRLGLEKTMFEAT--NPRTSEWFIRRYG 261 (299)
Q Consensus 190 ~~~~~~~~i~~~~~dL-eAGA~~VIiE---argi~d~--~G~~r~d~i~~ii~~l~~eklifEAP--~k~qQ~~fI~~fG 261 (299)
+|++. +++. +-|.|.+=+= +-|.|.. +-.++.|.+++|-+..+.- |.+=-- -|+.-...|+.||
T Consensus 156 ~Peea-------~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~P-LVlHGgS~vp~~~~~~~~~~g 227 (307)
T 3n9r_A 156 NPKEA-------EQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIP-LVLHGASAIPDNVRKSYLDAG 227 (307)
T ss_dssp CHHHH-------HHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSC-EEESSCCCCCHHHHHHHHHTT
T ss_pred CHHHH-------HHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCC-eEEeCCCCcchHHHHHHHHhc
Confidence 26666 4454 3798876553 2389973 4578999999994322322 444432 3667778899999
Q ss_pred CCccc--ccCCCCc
Q 022296 262 PKVNL--FVDHSQV 273 (299)
Q Consensus 262 ~~VNL--gI~~~eV 273 (299)
-++.= ||+.+|+
T Consensus 228 g~~~~~~G~p~e~i 241 (307)
T 3n9r_A 228 GDLKGSKGVPFEFL 241 (307)
T ss_dssp CCCTTCBCCCHHHH
T ss_pred CccCCCCCCCHHHH
Confidence 98876 4666555
No 139
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=83.58 E-value=11 Score=31.50 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=54.9
Q ss_pred chhHHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhC---CceecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 022296 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQH---DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (299)
Q Consensus 39 g~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~---gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lG 114 (299)
.+....++.+.+-++ +|++-+.+++... .+-|+.+|+. ++.+-.|+- . ..++ .+.|.+.|
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~------~~~i~~ir~~~~~~~~ig~~~v------~---~~~~-~~~a~~~G 83 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDA------DTVIKELSFLKEKGAIIGAGTV------T---SVEQ-CRKAVESG 83 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTH------HHHHHHTHHHHHTTCEEEEESC------C---SHHH-HHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhH------HHHHHHHHHHCCCCcEEEeccc------C---CHHH-HHHHHHcC
Confidence 344666667666665 9999998876321 2223334332 454443331 1 2233 46777899
Q ss_pred CCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 115 FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 115 F~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.|+| ++.++- .++++.+++.|..+++
T Consensus 84 ad~i-v~~~~~-------~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 84 AEFI-VSPHLD-------EEISQFCKEKGVFYMP 109 (205)
T ss_dssp CSEE-ECSSCC-------HHHHHHHHHHTCEEEC
T ss_pred CCEE-EcCCCC-------HHHHHHHHHcCCcEEC
Confidence 9999 998864 3588899999999888
No 140
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=83.44 E-value=2 Score=40.18 Aligned_cols=142 Identities=8% Similarity=0.093 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+ .
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---g-------------------- 111 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGI---G-------------------- 111 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---C--------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---C--------------------
Confidence 5788899999999999988654 3489999999999999873 1 11111133 1
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------------ccccC---CC-ccc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------------------DVCKH---AD-SLR 227 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------------------gi~d~---~G-~~r 227 (299)
..+..+. |+.++..-++|||-|++=.- -||+. .| ++.
T Consensus 112 -----------~~st~ea---i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~ 177 (332)
T 2r8w_A 112 -----------ALRTDEA---VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFS 177 (332)
T ss_dssp -----------CSSHHHH---HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCC
T ss_pred -----------CCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCC
Confidence 1124566 88999999999999998652 15653 23 577
Q ss_pred HHHHHHHHhccCCCceEE--ec-CC----chhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 228 ADIIAKVIGRLGLEKTMF--EA-TN----PRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 228 ~d~i~~ii~~l~~eklif--EA-P~----k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
.+.+.++++ ..+|+- |+ ++ -.+...+++..++++.++-- +|-+.+++|..|--|
T Consensus 178 ~e~~~~La~---~pnIvgiKdssgd~~~~~~~~~~l~~~~~~~f~v~~G-~D~~~l~~l~~G~~G 238 (332)
T 2r8w_A 178 DELLVRLAY---IPNIRAIKMPLPADADYAGELARLRPKLSDDFAIGYS-GDWGCTDATLAGGDT 238 (332)
T ss_dssp HHHHHHHHT---STTEEEEEECCCTTCCHHHHHHHHTTTSCTTCEEEEC-CHHHHHHHHHTTCSE
T ss_pred HHHHHHHHc---CCCEEEEEeCCCCchhHHHHHHHHHHhcCCCEEEEeC-chHHHHHHHHCCCCE
Confidence 788888864 345542 44 34 44555666667776666533 344568888766433
No 141
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.43 E-value=2.7 Score=38.02 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHcCCC-EEEecCCcc------c--CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccccc
Q 022296 102 AFKEYVEDCKQVGFD-TIELNVGSL------E--IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVA 172 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~-~IEISdGti------~--i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~ 172 (299)
.+.+..+.+.+.||| +|||+-++= . -+.+...++|+.+++.= -+| +.+|-.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~P-v~vKi~----------------- 166 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKP-LGVKLP----------------- 166 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSC-EEEEEC-----------------
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCC-EEEEEC-----------------
Confidence 455666677788999 999975421 1 25666778888888751 122 445421
Q ss_pred CCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 173 RAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
|. ++.+++ .+.++...++|||.|++-.+
T Consensus 167 ~~--------------~~~~~~---~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 167 PY--------------FDLVHF---DIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp CC--------------CSHHHH---HHHHHHHTTSCCCEEEECCC
T ss_pred CC--------------CCHHHH---HHHHHHHHHcCCcEEEecCC
Confidence 10 113444 56678889999999998765
No 142
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=83.24 E-value=13 Score=34.03 Aligned_cols=129 Identities=9% Similarity=0.112 Sum_probs=84.3
Q ss_pred hhHHHHHHHhh-cccccEEEeeCcccccC--ChhHHHHHHHHHHh-CCceec--CCcHHHHHHHhCCchHHHHHHHHHHc
Q 022296 40 HNVLEDIFESM-GQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQ-HDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQV 113 (299)
Q Consensus 40 ~~~l~DlLe~a-g~yID~lKfg~GTs~l~--p~~~l~eKI~l~~~-~gV~v~--~GtlfE~a~~qg~~~~~~yl~~~k~l 113 (299)
+.++.+.++.+ ..-+.-+-|.+|....+ +.+.+.+.++..++ +++.++ +|. .-++.++.+++.
T Consensus 93 ~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~-----------~~~e~l~~L~~a 161 (350)
T 3t7v_A 93 MEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGL-----------MDNATLLKAREK 161 (350)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSS-----------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCC-----------CCHHHHHHHHHc
Confidence 44444444433 23366777777764433 45678888888875 466544 231 346778889999
Q ss_pred CCCEEEecCCcc----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 114 GFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 114 GF~~IEISdGti----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
|++.+-++--+. ..+.+++.+.++.+++.|+++.+ +.-.+.. +
T Consensus 162 G~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~--~~i~Glg------e------------------- 214 (350)
T 3t7v_A 162 GANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVED--GILTGVG------N------------------- 214 (350)
T ss_dssp TEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEE--EEEESSS------C-------------------
T ss_pred CCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEcc--ceEeecC------C-------------------
Confidence 999988766554 36788999999999999998554 4433321 1
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEEe
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMID 215 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiE 215 (299)
+.+++ ++.++.-.+.+.+.|-+=
T Consensus 215 ------t~e~~---~~~l~~l~~l~~~~v~~~ 237 (350)
T 3t7v_A 215 ------DIEST---ILSLRGMSTNDPDMVRVM 237 (350)
T ss_dssp ------CHHHH---HHHHHHHHHTCCSEEEEE
T ss_pred ------CHHHH---HHHHHHHHhCCCCEEEec
Confidence 03444 666777778898877653
No 143
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=83.19 E-value=2.3 Score=38.33 Aligned_cols=162 Identities=14% Similarity=0.205 Sum_probs=87.5
Q ss_pred cccccCChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022296 62 GSHSLMPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (299)
Q Consensus 62 GTs~l~p~~~l~eKI~l~~~~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (299)
||--+|=++...+..+..++++| .|.-+.= ++...+..+.|-+-|+++|||.-- ...-.+.|+.++
T Consensus 14 ~~~~~~~~~~m~~~~~~l~~~~vv~Vir~~~--------~~~a~~~a~al~~gGi~~iEvt~~-----t~~a~e~I~~l~ 80 (232)
T 4e38_A 14 GTENLYFQSMMSTINNQLKALKVIPVIAIDN--------AEDIIPLGKVLAENGLPAAEITFR-----SDAAVEAIRLLR 80 (232)
T ss_dssp ------CCCCHHHHHHHHHHHCEEEEECCSS--------GGGHHHHHHHHHHTTCCEEEEETT-----STTHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHhCCEEEEEEcCC--------HHHHHHHHHHHHHCCCCEEEEeCC-----CCCHHHHHHHHH
Confidence 55555556677777888888898 5555531 234555677888889999999433 334568888887
Q ss_pred HcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc---
Q 022296 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--- 217 (299)
Q Consensus 141 ~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--- 217 (299)
+. .|+.-+ |. +|- ++ .++++..++|||++|+.=+-
T Consensus 81 ~~----~~~~~i-------Ga-----------------------GTV-lt-------~~~a~~Ai~AGA~fIvsP~~~~~ 118 (232)
T 4e38_A 81 QA----QPEMLI-------GA-----------------------GTI-LN-------GEQALAAKEAGATFVVSPGFNPN 118 (232)
T ss_dssp HH----CTTCEE-------EE-----------------------ECC-CS-------HHHHHHHHHHTCSEEECSSCCHH
T ss_pred Hh----CCCCEE-------eE-----------------------CCc-CC-------HHHHHHHHHcCCCEEEeCCCCHH
Confidence 73 122222 11 000 11 45569999999999985431
Q ss_pred --------ccccCCCcccHHHHHHHHhccCCCceEEecCCchh-HHHHHHHh-C--CCccc---c-cCCCCchhhhhhhc
Q 022296 218 --------DVCKHADSLRADIIAKVIGRLGLEKTMFEATNPRT-SEWFIRRY-G--PKVNL---F-VDHSQVMDLECLRG 281 (299)
Q Consensus 218 --------gi~d~~G~~r~d~i~~ii~~l~~eklifEAP~k~q-Q~~fI~~f-G--~~VNL---g-I~~~eVi~LE~LR~ 281 (299)
|+-==-|-...+++.+-+ +.|.+-|-+ =|-..+ =..||+.+ | |++.+ | |.++++- |.|..
T Consensus 119 vi~~~~~~gi~~ipGv~TptEi~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p~p~ip~~ptGGI~~~n~~--~~l~a 194 (232)
T 4e38_A 119 TVRACQEIGIDIVPGVNNPSTVEAAL-EMGLTTLKF-FPAEASGGISMVKSLVGPYGDIRLMPTGGITPSNID--NYLAI 194 (232)
T ss_dssp HHHHHHHHTCEEECEECSHHHHHHHH-HTTCCEEEE-CSTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHH--HHHTS
T ss_pred HHHHHHHcCCCEEcCCCCHHHHHHHH-HcCCCEEEE-CcCccccCHHHHHHHHHHhcCCCeeeEcCCCHHHHH--HHHHC
Confidence 211001222344444333 366665555 332222 13566654 3 36666 4 7776643 34444
Q ss_pred c
Q 022296 282 R 282 (299)
Q Consensus 282 ~ 282 (299)
|
T Consensus 195 G 195 (232)
T 4e38_A 195 P 195 (232)
T ss_dssp T
T ss_pred C
Confidence 4
No 144
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=83.13 E-value=0.77 Score=40.76 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=59.6
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHh-CCceecCCc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~-~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
......++++..++|+|++|+|.+-..-+..+.+++ .++ +|..+..-- +.. -|+.++.|.+.+.++|.|
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~----l~~~~g~~v~lD~Kl~D-----ipnTv~~~~~~~~~~gad 93 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAE----FRKRFGCRIIADFKVAD-----IPETNEKICRATFKAGAD 93 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHH----HHHHHCCEEEEEEEECS-----CHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHH----HHhcCCCeEEEEEeecc-----cHhHHHHHHHHHHhCCCC
Confidence 567888999999999999999987776566665554 333 454443321 211 123466677777778888
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcC
Q 022296 117 TIELNVGSLEIPEETLLRYVRLVKSAG 143 (299)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G 143 (299)
.|-|.- ....+....+++.+++.|
T Consensus 94 ~vtvh~---~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 94 AIIVHG---FPGADSVRACLNVAEEMG 117 (228)
T ss_dssp EEEEES---TTCHHHHHHHHHHHHHHT
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcC
Confidence 877753 223455556666666554
No 145
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=83.05 E-value=5.7 Score=34.68 Aligned_cols=46 Identities=15% Similarity=0.094 Sum_probs=39.8
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+.|++.|.|+|-|-+---.+|.++-.++++.+++.|+.++.+++-
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNN 120 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7999999999999955544688888899999999999998888765
No 146
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=82.84 E-value=2.2 Score=36.74 Aligned_cols=75 Identities=8% Similarity=-0.052 Sum_probs=46.8
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC--Cceec--------CCcHHHHHHHhCC--------
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVS--------TGDWAEHLIRNGP-------- 100 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~--------~GtlfE~a~~qg~-------- 100 (299)
.+....++++.+++|+|++|+|.|-+.-+..+.+++. +++ |..++ |.|+.|.+..-|-
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv~~~~f~~~G~~~i~~l----~~~~p~~~v~lD~kl~dip~t~~~~~~~~Gad~itvh~~ 89 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDL----KALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICC 89 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHH----HHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETT
T ss_pred CHHHHHHHHHHhcccCCEEEECHHHHHHhCHHHHHHH----HHhCCCCeEEEEEEecccHHHHHHHHHhCCCCEEEEecc
Confidence 4567788899999999999999997765666655543 333 44433 3366665544431
Q ss_pred ---chHHHHHHHHHHcCCCE
Q 022296 101 ---SAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 101 ---~~~~~yl~~~k~lGF~~ 117 (299)
+.++++++.|++.|...
T Consensus 90 ~g~~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 90 ADINTAKGALDVAKEFNGDV 109 (216)
T ss_dssp SCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHHHcCCCc
Confidence 12455566666655554
No 147
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=82.70 E-value=1.1 Score=40.49 Aligned_cols=21 Identities=5% Similarity=-0.081 Sum_probs=16.7
Q ss_pred HHHHHHccCcEEEEeccccccC
Q 022296 201 AERCLEAGADMIMIDSDDVCKH 222 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEargi~d~ 222 (299)
+...|++||..+.+ +.-+++.
T Consensus 188 ~~~~l~aGa~~~vg-Gs~l~~~ 208 (232)
T 4e38_A 188 IDNYLAIPQVLACG-GTWMVDK 208 (232)
T ss_dssp HHHHHTSTTBCCEE-ECGGGCH
T ss_pred HHHHHHCCCeEEEE-CchhcCh
Confidence 38899999999888 6667654
No 148
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=82.69 E-value=14 Score=35.13 Aligned_cols=146 Identities=17% Similarity=0.133 Sum_probs=96.2
Q ss_pred HHHHHHhhcccccEEEeeCcccccCCh----------hHHHHHHHHHHhCC--ceecCCcHHHHHHHhCCchHHHHHHHH
Q 022296 43 LEDIFESMGQFVDGLKFSGGSHSLMPK----------PFIEEVVKRAHQHD--VYVSTGDWAEHLIRNGPSAFKEYVEDC 110 (299)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~----------~~l~eKI~l~~~~g--V~v~~GtlfE~a~~qg~~~~~~yl~~~ 110 (299)
++..+++ =+|.+-+-..+|-+..+ +.+++-++.++++| +.|... +|.+...+++.+-+..+.+
T Consensus 80 i~~a~~~---g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~--~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 80 AKVAVET---GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS--AEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHHT---TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE--ETTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHc---CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE--EEeCCCCCHHHHHHHHHHH
Confidence 4444543 35666666666643332 45788899999999 766543 1223344555677778888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCcc
Q 022296 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEI 189 (299)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
.+. .+.|=|.|-.--+.+.+-.++|+.+++. |. .-.+++-+.. |
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~--~~~i~~H~Hn-------d------------------------- 199 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRVVGP--RVDIEFHGHN-------D------------------------- 199 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTT--TSEEEEEEBC-------T-------------------------
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCC--CCeEEEEeCC-------C-------------------------
Confidence 899 9999998888888888888999999884 11 2235553221 1
Q ss_pred chhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHH
Q 022296 190 EVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIA 232 (299)
Q Consensus 190 ~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~ 232 (299)
.... +..+...++|||+.|=.=-.|+=...||...+.+-
T Consensus 200 -~GlA---vAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~vv 238 (382)
T 2ztj_A 200 -TGCA---IANAYEAIEAGATHVDTTILGIGERNGITPLGGFL 238 (382)
T ss_dssp -TSCH---HHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHH
T ss_pred -ccHH---HHHHHHHHHhCCCEEEEccccccccccchhHHHHH
Confidence 2233 56668899999996544445888899999887664
No 149
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=82.62 E-value=4.8 Score=37.70 Aligned_cols=134 Identities=16% Similarity=0.207 Sum_probs=68.2
Q ss_pred cCChhHHHHHHHHHHhCC-------cee--cCC--cHHHHHHHhCC--chHHHHHHHHHHcCCCEEEecCCcccCChhHH
Q 022296 66 LMPKPFIEEVVKRAHQHD-------VYV--STG--DWAEHLIRNGP--SAFKEYVEDCKQVGFDTIELNVGSLEIPEETL 132 (299)
Q Consensus 66 l~p~~~l~eKI~l~~~~g-------V~v--~~G--tlfE~a~~qg~--~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r 132 (299)
...++.++.-++.+++++ |.+ +++ .|-|. .+++ +.+.++-+.+++.|++.|-.|. .+
T Consensus 112 ~~G~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l--~~~~~~e~V~~lA~~a~~~G~dGvV~s~------~E-- 181 (303)
T 3ru6_A 112 SAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSI--YRQKIEEAVINFSKISYENGLDGMVCSV------FE-- 181 (303)
T ss_dssp GGCHHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHH--HSSCHHHHHHHHHHHHHHTTCSEEECCT------TT--
T ss_pred cCCHHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHH--HcCCHHHHHHHHHHHHHHcCCCEEEECH------HH--
Confidence 445667777777777765 212 333 35443 2330 1234455677888988765532 22
Q ss_pred HHHHHHHHHcCCc-ccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcE
Q 022296 133 LRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADM 211 (299)
Q Consensus 133 ~~lI~~~~~~G~~-v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~ 211 (299)
...||.....+|. |-|=++.+ .+ ..+| ..|+..+...++||||+
T Consensus 182 ~~~IR~~~~~~fl~VTPGIr~q--G~---~~~D------------------------------Q~Rv~t~~~a~~aGAd~ 226 (303)
T 3ru6_A 182 SKKIKEHTSSNFLTLTPGIRPF--GE---TNDD------------------------------QKRVANLAMARENLSDY 226 (303)
T ss_dssp HHHHHHHSCTTSEEEECCCCTT--C-----------------------------------------CCSHHHHHHTTCSE
T ss_pred HHHHHHhCCCccEEECCCcCcc--cC---Cccc------------------------------ccccCCHHHHHHcCCCE
Confidence 3466665555553 34422221 11 1111 12355567789999997
Q ss_pred EEEeccccccCCCcccHHHHHHHHhccCCCceEEecC
Q 022296 212 IMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 212 VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP 248 (299)
+++ ||.||.+..- ...+++|.+.+.- |=||++.
T Consensus 227 iVv-Gr~I~~a~dp--~~a~~~i~~~i~~-~~~~~~~ 259 (303)
T 3ru6_A 227 IVV-GRPIYKNENP--RAVCEKILNKIHR-KNISEND 259 (303)
T ss_dssp EEE-CHHHHTSSCH--HHHHHHHHHHHC---------
T ss_pred EEE-ChHHhCCCCH--HHHHHHHHHHHHh-ccccccc
Confidence 655 7999998743 3445666655553 2334443
No 150
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=82.57 E-value=2.8 Score=38.75 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcC-CcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAG-LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G-~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- =++.-=+|+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv------------------------- 84 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT------------------------- 84 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-------------------------
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-------------------------
Confidence 67788888889999999775333 4799999999999998830 011111122
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-----------c-----------------cccC---CCcc
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-----------D-----------------VCKH---ADSL 226 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-----------g-----------------i~d~---~G~~ 226 (299)
...+..+. |+.++..-++|||-|++=.- | ||+. .-++
T Consensus 85 ---------g~~~t~~a---i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l 152 (309)
T 3fkr_A 85 ---------SHYSTQVC---AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTAL 152 (309)
T ss_dssp ---------CCSSHHHH---HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCC
T ss_pred ---------CCchHHHH---HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCC
Confidence 11125566 88889999999999998421 1 4553 2356
Q ss_pred cHHHHHHHHhccC-CCceEEecCC-chhHHHHHHHhCCCcccccCCCCch-hhhhhhcccCC
Q 022296 227 RADIIAKVIGRLG-LEKTMFEATN-PRTSEWFIRRYGPKVNLFVDHSQVM-DLECLRGRNLG 285 (299)
Q Consensus 227 r~d~i~~ii~~l~-~eklifEAP~-k~qQ~~fI~~fG~~VNLgI~~~eVi-~LE~LR~~~~G 285 (299)
..+.+.++.+.++ +-=+=.|++. -.+...+++..+.++....+-+|-+ -+++|..|--|
T Consensus 153 ~~~~~~~La~~~pnIvgiK~~~~~~~~~~~~~~~~~~~~~~~~~~G~d~~~l~~~l~~G~~G 214 (309)
T 3fkr_A 153 SAPFLARMAREIEQVAYFXIETPGAANKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATG 214 (309)
T ss_dssp CHHHHHHHHHHSTTEEEEEECSSSHHHHHHHHHHHHGGGCCEEEECGGGTTHHHHHHTTCCE
T ss_pred CHHHHHHHHhhCCCEEEEECCCcchHHHHHHHHHhcCCceeeecCCchHHHHHHHHHCCCcE
Confidence 6677777764443 2112236654 2344455555554332112333333 35677655544
No 151
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=82.24 E-value=5.3 Score=33.51 Aligned_cols=102 Identities=16% Similarity=0.285 Sum_probs=66.5
Q ss_pred hhHHHHHHHhhccc----ccEEEeeCcccccCChhHHHHHHHHHHhCCcee--cC-CcHHHHHHHhCCchHHHHHHHHHH
Q 022296 40 HNVLEDIFESMGQF----VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--ST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (299)
Q Consensus 40 ~~~l~DlLe~ag~y----ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~-GtlfE~a~~qg~~~~~~yl~~~k~ 112 (299)
+..+.+.++...++ ++.+-|++|.-.+.| +.|.+.++.++++|+.+ .+ |++++ . ++.++.+.+
T Consensus 52 ~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~-~~l~~l~~~~~~~~~~i~i~Tng~~~~-----~----~~~~~~l~~ 121 (245)
T 3c8f_A 52 VEDLMKEVVTYRHFMNASGGGVTASGGEAILQA-EFVRDWFRACKKEGIHTCLDTNGFVRR-----Y----DPVIDELLE 121 (245)
T ss_dssp HHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGH-HHHHHHHHHHHTTTCCEEEEECCCCCC-----C----CHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCH-HHHHHHHHHHHHcCCcEEEEeCCCcCc-----C----HHHHHHHHH
Confidence 44555666655544 578999999988865 56899999999998844 34 64422 1 122333444
Q ss_pred cCCCEEEecCCccc---------CChhHHHHHHHHHHHcCCcccceeee
Q 022296 113 VGFDTIELNVGSLE---------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 113 lGF~~IEISdGti~---------i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
. ++.|-||=-+.+ .+.+...+.|+.+++.|+.+.-.+.+
T Consensus 122 ~-~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~~ 169 (245)
T 3c8f_A 122 V-TDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVV 169 (245)
T ss_dssp T-CSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred h-CCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHHhcCCEEEEEEee
Confidence 4 678888754431 34467778999999999865444333
No 152
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=81.95 E-value=1.3 Score=39.45 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt-i~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++ ++.++++||+.||+.... ...+.++..++.+.+++.|+++..
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~ 84 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTA 84 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEE
Confidence 7889 999999999999998542 233346777888999999999776
No 153
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=81.90 E-value=3.4 Score=38.00 Aligned_cols=160 Identities=16% Similarity=0.111 Sum_probs=97.1
Q ss_pred CCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHc--CCcccceeeeecCC
Q 022296 82 HDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNK 156 (299)
Q Consensus 82 ~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~--G~~v~~E~gvK~~~ 156 (299)
.||.+..=|.|-.=-.=+.+.++++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. | ++.-=+|+
T Consensus 18 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---- 92 (304)
T 3cpr_A 18 GTVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD-RAKLIAGV---- 92 (304)
T ss_dssp CSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT-TSEEEEEC----
T ss_pred CceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEecC----
Confidence 577655545441000111236888899999999999977543 3489999999999999873 1 11101222
Q ss_pred CCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------------
Q 022296 157 SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD------------------- 217 (299)
Q Consensus 157 sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar------------------- 217 (299)
...+..+. |+.++..-++|||.|++=.-
T Consensus 93 ------------------------------g~~st~~a---i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 93 ------------------------------GTNNTRTS---VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAA 139 (304)
T ss_dssp ------------------------------CCSCHHHH---HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHH
T ss_pred ------------------------------CCCCHHHH---HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Confidence 11125566 88999999999999998652
Q ss_pred ------ccccC---CC-cccHHHHHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccC
Q 022296 218 ------DVCKH---AD-SLRADIIAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNL 284 (299)
Q Consensus 218 ------gi~d~---~G-~~r~d~i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~ 284 (299)
-||+. .| ++..+.+.++++ ..+|+- |+ ++-.+...+++.. +..+ ..-+|-+.+++|..|--
T Consensus 140 a~~lPiilYn~P~~tg~~l~~~~~~~La~---~pnIvgiKdssgd~~~~~~~~~~~--~f~v-~~G~d~~~l~~l~~G~~ 213 (304)
T 3cpr_A 140 ATEVPICLYDIPGRSGIPIESDTMRRLSE---LPTILAVXDAKGDLVAATSLIKET--GLAW-YSGDDPLNLVWLALGGS 213 (304)
T ss_dssp HCCSCEEEEECHHHHSSCCCHHHHHHHTT---STTEEEEEECSCCHHHHHHHHHHH--CCEE-EECSGGGHHHHHHTTCC
T ss_pred hcCCCEEEEeCccccCcCCCHHHHHHHHc---CCCEEEEecCCCCHHHHHHHHHhc--CEEE-EECcHHHHHHHHHCCCC
Confidence 14553 22 566777777753 345543 44 4555666666665 3333 33345556777776643
Q ss_pred C
Q 022296 285 G 285 (299)
Q Consensus 285 G 285 (299)
|
T Consensus 214 G 214 (304)
T 3cpr_A 214 G 214 (304)
T ss_dssp E
T ss_pred E
Confidence 3
No 154
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=81.76 E-value=8.5 Score=35.55 Aligned_cols=144 Identities=10% Similarity=0.039 Sum_probs=94.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC-cccceeeeecCCCCCCCcccccccccccCCCC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL-KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPR 176 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~-~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~ 176 (299)
+.++++++++-+-|.+.|=+.-.|- .|+.++|.++++.+.+.-= ++.-=+|+
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv------------------------ 83 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV------------------------ 83 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC------------------------
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC------------------------
Confidence 4788999999999999998865544 6999999999999988410 11101122
Q ss_pred ccchhcccCCCccchhhhhhhHHHHHHHHHccC-cEEEEecc-------------------------ccccC----CCcc
Q 022296 177 STDKLFLASNPEIEVGVGINKSRRAERCLEAGA-DMIMIDSD-------------------------DVCKH----ADSL 226 (299)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA-~~VIiEar-------------------------gi~d~----~G~~ 226 (299)
...+..+. |+.++..-++|| |.|++=.- -||+. .-++
T Consensus 84 ----------g~~~t~~a---i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l 150 (311)
T 3h5d_A 84 ----------GTNDTRDS---IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVEL 150 (311)
T ss_dssp ----------CCSSHHHH---HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCC
T ss_pred ----------CCcCHHHH---HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCC
Confidence 11125566 899999999997 99988662 14653 2356
Q ss_pred cHHHHHHHHhccCCCce--EEecCCchhHHHHHHHhCCCcccccCCCCchhhhhhhcccCC
Q 022296 227 RADIIAKVIGRLGLEKT--MFEATNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRNLG 285 (299)
Q Consensus 227 r~d~i~~ii~~l~~ekl--ifEAP~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~~G 285 (299)
..+.+.++.+ . .+| |=|+.+-.+...+++..++++.+.--. |-+-+++|..|--|
T Consensus 151 ~~~~~~~La~-~--pnIvgiKdssd~~~~~~~~~~~~~~f~v~~G~-d~~~l~~l~~Ga~G 207 (311)
T 3h5d_A 151 TPETMLRLAD-H--PNIIGVKECTSLANMAYLIEHKPEEFLIYTGE-DGDAFHAMNLGADG 207 (311)
T ss_dssp CHHHHHHHHT-S--TTEEEEEECSCHHHHHHHHHHCCSSCEEEECC-GGGHHHHHHHTCCE
T ss_pred CHHHHHHHhc-C--CCEEEEEeCCCHHHHHHHHHHcCCCEEEEECc-HHHHHHHHHcCCCE
Confidence 7777777764 3 344 224445566667777777776665333 33457777755433
No 155
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=81.63 E-value=7.7 Score=32.59 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=45.6
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (299)
.+.+.+..++.- .|++ ++.+. + .+-++.+|++|+++.+|.. . .+-...+.++|.+.|
T Consensus 72 ~~~~~~~a~~~G---ad~i-v~~~~----~----~~~~~~~~~~g~~vi~g~~----------t-~~e~~~a~~~Gad~v 128 (205)
T 1wa3_A 72 SVEQCRKAVESG---AEFI-VSPHL----D----EEISQFCKEKGVFYMPGVM----------T-PTELVKAMKLGHTIL 128 (205)
T ss_dssp SHHHHHHHHHHT---CSEE-ECSSC----C----HHHHHHHHHHTCEEECEEC----------S-HHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHcC---CCEE-EcCCC----C----HHHHHHHHHcCCcEECCcC----------C-HHHHHHHHHcCCCEE
Confidence 344566666544 4555 66553 3 3567788999999999731 1 112456788999999
Q ss_pred EecCCcccCChhHHHHHHHHHHH
Q 022296 119 ELNVGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~ 141 (299)
-+.... ....+.++.+++
T Consensus 129 k~~~~~-----~~g~~~~~~l~~ 146 (205)
T 1wa3_A 129 KLFPGE-----VVGPQFVKAMKG 146 (205)
T ss_dssp EETTHH-----HHHHHHHHHHHT
T ss_pred EEcCcc-----ccCHHHHHHHHH
Confidence 875421 123456666665
No 156
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=81.61 E-value=3.3 Score=39.58 Aligned_cols=101 Identities=10% Similarity=-0.051 Sum_probs=64.9
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHc-CCcccceeeeec
Q 022296 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSA-GLKAKPKFAVMF 154 (299)
Q Consensus 79 ~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~ 154 (299)
.+-.||.+..=|.|-.--.=+.+.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+. +=++.-=+|+
T Consensus 58 ~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv-- 135 (360)
T 4dpp_A 58 IKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT-- 135 (360)
T ss_dssp HHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--
T ss_pred cccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec--
Confidence 3556776554443310001112368888999999999999884433 489999999999998873 0011001122
Q ss_pred CCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEec
Q 022296 155 NKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDS 216 (299)
Q Consensus 155 ~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEa 216 (299)
...+..+. |+.++..-++|||.|++=.
T Consensus 136 --------------------------------g~~st~ea---i~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 136 --------------------------------GSNSTREA---IHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp --------------------------------CCSSHHHH---HHHHHHHHHTTCSEEEEEC
T ss_pred --------------------------------CCCCHHHH---HHHHHHHHHcCCCEEEEcC
Confidence 11125566 8999999999999999865
No 157
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=81.53 E-value=5.7 Score=33.76 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc--CCcc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKA 146 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v 146 (299)
.++++.+.+.|.+.|.+......=|.+...++++.+++. |+.+
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v 122 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEI 122 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceE
Confidence 456788889999999987654332224556788888886 5554
No 158
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=81.40 E-value=25 Score=30.10 Aligned_cols=144 Identities=13% Similarity=0.162 Sum_probs=79.5
Q ss_pred HHHHHHhCCceecC-CcHHHHHHHhCCc--hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceee
Q 022296 75 VVKRAHQHDVYVST-GDWAEHLIRNGPS--AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 75 KI~l~~~~gV~v~~-GtlfE~a~~qg~~--~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
.++.. ++++.++. +.--|-. .+++ .+.+..+.+.+.|+++|++. +. ..|+.+++.- -+|=++
T Consensus 10 ~~~~~-~~~~~~~~~~~~~~p~--~~~~~~~~~~~a~~~~~~G~~~i~~~------~~----~~i~~i~~~~--~~p~i~ 74 (234)
T 1yxy_A 10 LMEQL-KGGIIVSCQALPGEPL--YSETGGIMPLMAKAAQEAGAVGIRAN------SV----RDIKEIQAIT--DLPIIG 74 (234)
T ss_dssp HHHHH-TTSCEEECCCCTTSTT--CCTTCCSHHHHHHHHHHHTCSEEEEE------SH----HHHHHHHTTC--CSCEEE
T ss_pred HHHHH-hCCEEEEeeCCCCCCC--cCCccchHHHHHHHHHHCCCcEeecC------CH----HHHHHHHHhC--CCCEEe
Confidence 33444 77776554 3111100 1344 67888999999999999985 12 3466666530 122123
Q ss_pred eecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHH
Q 022296 152 VMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADII 231 (299)
Q Consensus 152 vK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i 231 (299)
+-. .+.+ +. ..++.+ - .++++..+++||+.|.+.+.-..+.+|..-.+++
T Consensus 75 ~~~--~~~~---~~--~~~i~~--------------------~---~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i 124 (234)
T 1yxy_A 75 IIK--KDYP---PQ--EPFITA--------------------T---MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFI 124 (234)
T ss_dssp ECB--CCCT---TS--CCCBSC--------------------S---HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHH
T ss_pred eEc--CCCC---cc--ccccCC--------------------h---HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHH
Confidence 200 0000 10 001111 1 5566889999999999987643333333346778
Q ss_pred HHHHhccCCCceEEecCCchhHHHHHHHhCCCc
Q 022296 232 AKVIGRLGLEKTMFEATNPRTSEWFIRRYGPKV 264 (299)
Q Consensus 232 ~~ii~~l~~eklifEAP~k~qQ~~fI~~fG~~V 264 (299)
+.+-+..+--.++.+...... ..-....|.+.
T Consensus 125 ~~i~~~~~~~~v~~~~~t~~e-a~~a~~~Gad~ 156 (234)
T 1yxy_A 125 RQVKEKYPNQLLMADISTFDE-GLVAHQAGIDF 156 (234)
T ss_dssp HHHHHHCTTCEEEEECSSHHH-HHHHHHTTCSE
T ss_pred HHHHHhCCCCeEEEeCCCHHH-HHHHHHcCCCE
Confidence 877766653456667765544 44445678774
No 159
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=81.39 E-value=5.6 Score=36.87 Aligned_cols=98 Identities=20% Similarity=0.232 Sum_probs=64.2
Q ss_pred HHHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~ 170 (299)
-+-.+..-+.|..+|-|-|+.. -+|.++.++-|+.+++.+-. +.|-++- ..|. .
T Consensus 93 ~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~--~~~~i~a-------Rtda----~ 159 (290)
T 2hjp_A 93 HYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARAD--RDFVVIA-------RVEA----L 159 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSS--TTSEEEE-------EECT----T
T ss_pred HHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhccc--CCcEEEE-------eehH----h
Confidence 3334445568999999999873 36777777788877776432 3344420 0110 0
Q ss_pred ccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 171 VARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
+ ++ ...+++ |++++...+||||.|.+|++ -...+++.+|.+.++
T Consensus 160 ~------------a~---~g~~~a---i~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 160 I------------AG---LGQQEA---VRRGQAYEEAGADAILIHSR-------QKTPDEILAFVKSWP 203 (290)
T ss_dssp T------------TT---CCHHHH---HHHHHHHHHTTCSEEEECCC-------CSSSHHHHHHHHHCC
T ss_pred h------------cc---ccHHHH---HHHHHHHHHcCCcEEEeCCC-------CCCHHHHHHHHHHcC
Confidence 0 00 015777 99999999999999999984 122467788888777
No 160
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=81.11 E-value=21 Score=33.85 Aligned_cols=140 Identities=9% Similarity=0.068 Sum_probs=89.3
Q ss_pred HHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022296 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (299)
+-+.|..+| ||.+=.||+.+ .| ...+-++.+.+.+..+..-+| .+. ..++ ++.+.+.|.+.|-|..
T Consensus 30 ia~~L~~~G--v~~IE~g~p~~--~~--~~~~~~~~i~~~~~~~~v~~~-----~r~--~~~d-i~~a~~~g~~~v~i~~ 95 (382)
T 2ztj_A 30 IAKALDEFG--IEYIEVTTPVA--SP--QSRKDAEVLASLGLKAKVVTH-----IQC--RLDA-AKVAVETGVQGIDLLF 95 (382)
T ss_dssp HHHHHHHHT--CSEEEECCTTS--CH--HHHHHHHHHHTSCCSSEEEEE-----EES--CHHH-HHHHHHTTCSEEEEEE
T ss_pred HHHHHHHcC--cCEEEEcCCcC--CH--HHHHHHHHHHhcCCCcEEEEE-----ccc--Chhh-HHHHHHcCCCEEEEEe
Confidence 445566666 88888888654 23 355677777777654222223 122 2333 6778888999999876
Q ss_pred Cccc-------CCh----hHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccch
Q 022296 123 GSLE-------IPE----ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEV 191 (299)
Q Consensus 123 Gti~-------i~~----~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (299)
.+-+ .+. +.-.+.|+.+++.|-....+|...+. . ..++
T Consensus 96 ~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~-----~--------------------------~~~~ 144 (382)
T 2ztj_A 96 GTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDT-----F--------------------------RSEE 144 (382)
T ss_dssp CC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTT-----T--------------------------TSCH
T ss_pred ccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeC-----C--------------------------CCCH
Confidence 5543 232 44568899999998322234444210 1 1226
Q ss_pred hhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 192 GVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 192 ~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
+.+ ++.++...++ |+.| .|+|..|-..+..+.++++
T Consensus 145 ~~~---~~~~~~~~~~-a~~i-----~l~DT~G~~~P~~~~~lv~ 180 (382)
T 2ztj_A 145 QDL---LAVYEAVAPY-VDRV-----GLADTVGVATPRQVYALVR 180 (382)
T ss_dssp HHH---HHHHHHHGGG-CSEE-----EEEETTSCCCHHHHHHHHH
T ss_pred HHH---HHHHHHHHHh-cCEE-----EecCCCCCCCHHHHHHHHH
Confidence 777 8888999999 9865 4788888888888888876
No 161
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=81.05 E-value=3.3 Score=37.76 Aligned_cols=88 Identities=11% Similarity=0.191 Sum_probs=54.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc-cceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA-KPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v-~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
+.++-+.+++.|.+.+-+|. +..+.||.....+|.. -|=++.+ ..+ .+|
T Consensus 164 V~~~A~~a~~aG~~GvV~sa--------~e~~~iR~~~g~~fl~VtPGIr~q--g~~---~~d----------------- 213 (255)
T 3ldv_A 164 VLRLATLTKNAGLDGVVCSA--------QEASLLKQHLGREFKLVTPGIRPA--GSE---QGD----------------- 213 (255)
T ss_dssp HHHHHHHHHHTTCSEEECCH--------HHHHHHHHHHCTTSEEEEECCCCT--TST---TSS-----------------
T ss_pred HHHHHHHHHHcCCCEEEECH--------HHHHHHHHhcCCCcEEEeCCcccC--cCC---ccc-----------------
Confidence 44566667788998888772 2467888877777763 3644432 111 122
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
..|+-..+..++||||+ ||=+|.||.+..- ...+++|.+
T Consensus 214 -------------Q~Rv~t~~~a~~aGad~-iVvGr~I~~a~dp--~~a~~~i~~ 252 (255)
T 3ldv_A 214 -------------QRRIMTPAQAIASGSDY-LVIGRPITQAAHP--EVVLEEINS 252 (255)
T ss_dssp -------------CSSSCCHHHHHHTTCSE-EEECHHHHTCSCH--HHHHHHHHH
T ss_pred -------------eeccCCHHHHHHcCCCE-EEECHHHhCCCCH--HHHHHHHHH
Confidence 12355567788999996 5568999998743 334444443
No 162
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=81.00 E-value=3.3 Score=36.84 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=29.0
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCce----ecCCcHHH
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVY----VSTGDWAE 93 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~----v~~GtlfE 93 (299)
+++.+.+.-+++|-+- .-+ +.+ .+.+-++.+|++|+. +.|+|-.|
T Consensus 72 ~i~~~~~aGAd~itvh---~Ea--~~~--~~~~~i~~i~~~G~k~gv~lnp~tp~~ 120 (231)
T 3ctl_A 72 YIAQLARAGADFITLH---PET--ING--QAFRLIDEIRRHDMKVGLILNPETPVE 120 (231)
T ss_dssp THHHHHHHTCSEEEEC---GGG--CTT--THHHHHHHHHHTTCEEEEEECTTCCGG
T ss_pred HHHHHHHcCCCEEEEC---ccc--CCc--cHHHHHHHHHHcCCeEEEEEECCCcHH
Confidence 6666766666665443 211 012 478999999999987 56777654
No 163
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=80.85 E-value=18 Score=33.65 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=18.3
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEec
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDS 216 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEa 216 (299)
.++. ++.++..-++|+|+|-+=.
T Consensus 228 ~~~~---~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 228 AKDY---VPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp GGGH---HHHHHHHHHTTCCEEEEEC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEec
Confidence 5566 7778888899999998843
No 164
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=80.82 E-value=4.7 Score=37.76 Aligned_cols=50 Identities=14% Similarity=0.146 Sum_probs=36.9
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHcCCcccc
Q 022296 99 GPSAFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti-~--i~----~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+-.+++.++.++++||++||+++.-+ . .+ .++..++-+.+++.|+++..
T Consensus 31 ~~~~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (393)
T 1xim_A 31 TALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPM 87 (393)
T ss_dssp CCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CCCCHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEE
Confidence 334788999999999999999983221 1 12 45677788888999998653
No 165
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=80.64 E-value=26 Score=30.07 Aligned_cols=169 Identities=15% Similarity=0.133 Sum_probs=91.7
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCC----hhHHHHHHHHHHhCCceec--CC-cHH--
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVS--TG-DWA-- 92 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~v~--~G-tlf-- 92 (299)
+..|++.++..+. .+...+.+++.+..|=++ ..+.|-+.... ++.+++.-+++.+..+.-. .| .+.
T Consensus 29 ~~~Gv~~~v~~~~----~~~~~~~~~~l~~~~~~i-~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~iGE~Gld~~~~ 103 (264)
T 1xwy_A 29 FDAGVNGLLITGT----NLRESQQAQKLARQYSSC-WSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRN 103 (264)
T ss_dssp HHTTCCEEEECCC----SHHHHHHHHHHHHHSTTE-EEEECCCGGGGGGCCHHHHHHHHHHHTSTTEEEEEEEEEETTTC
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHhCCCE-EEEEEECCcccccCCHHHHHHHHHHhcCCCeEEEEEeccCCCCC
Confidence 4579999999887 456788888888887664 34555443222 2335555555543333211 02 110
Q ss_pred -H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee-eeecCCCCCCCcccccccc
Q 022296 93 -E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF-AVMFNKSDIPSDRDRAFGA 169 (299)
Q Consensus 93 -E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~-gvK~~~sevg~~~d~~~~~ 169 (299)
+ ...++. .|...++.|+++|...+==+.. ..+ ++++.+++.+.. .. ++-...+
T Consensus 104 ~~~~~~q~~--~f~~~l~~a~~~~lpv~iH~~~----a~~---~~~~il~~~~~~---~~~~v~H~~~------------ 159 (264)
T 1xwy_A 104 FSTPEEQER--AFVAQLRIAADLNMPVFMHCRD----AHE---RFMTLLEPWLDK---LPGAVLHCFT------------ 159 (264)
T ss_dssp SSCHHHHHH--HHHHHHHHHHHHTCCEEEEEES----CHH---HHHHHHGGGGGG---SSCEEECSCC------------
T ss_pred CCcHHHHHH--HHHHHHHHHHHhCCcEEEEcCC----chH---HHHHHHHhcCCC---CCcEEEEccC------------
Confidence 1 112222 5888999999999887633322 122 345555553321 11 1111000
Q ss_pred cccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecCC
Q 022296 170 YVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEATN 249 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP~ 249 (299)
.+ .+.+++.++.|.+.=+ .|.... .-+.+.+.++++.+|++|||||..-
T Consensus 160 -----------------g~---------~~~~~~~~~~g~yi~~---~g~~~~--~~~~~~l~~~~~~~~~drll~eTD~ 208 (264)
T 1xwy_A 160 -----------------GT---------REEMQACVAHGIYIGI---TGWVCD--ERRGLELRELLPLIPAEKLLIETDA 208 (264)
T ss_dssp -----------------CC---------HHHHHHHHHTTCEEEE---CGGGGC--TTTSHHHHHHGGGSCGGGEEECCCT
T ss_pred -----------------CC---------HHHHHHHHHCCeEEEE---CccccC--CcCcHHHHHHHHhCCHHHEEEecCC
Confidence 00 2334666777754332 243220 0124567788999999999999876
Q ss_pred c
Q 022296 250 P 250 (299)
Q Consensus 250 k 250 (299)
|
T Consensus 209 P 209 (264)
T 1xwy_A 209 P 209 (264)
T ss_dssp T
T ss_pred C
Confidence 5
No 166
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=80.38 E-value=5.6 Score=36.86 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=45.8
Q ss_pred HHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEe------cCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL------NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 79 ~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEI------SdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..++|+..|.. .| ..++.++.+|++|+++|-+ +.|..+ .+.-++++++++++||+|.-.|..
T Consensus 15 ~e~~g~~~~~~--------~G--~~~~~~~ilk~~G~n~vRlri~v~P~~g~~d--~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 15 LEDEGYSYKNL--------NG--QTQALETILADAGINSIRQRVWVNPSDGSYD--LDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp HHHTTCCCBCT--------TS--CBCCHHHHHHHHTCCEEEEEECSCCTTCTTC--HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHcCCEEECC--------CC--CCchHHHHHHHcCCCEEEEEEEECCCCCccC--HHHHHHHHHHHHHCCCEEEEEecc
Confidence 35577766541 12 2345688999999999999 355443 567778999999999999988866
Q ss_pred e
Q 022296 153 M 153 (299)
Q Consensus 153 K 153 (299)
.
T Consensus 83 s 83 (334)
T 1fob_A 83 S 83 (334)
T ss_dssp S
T ss_pred C
Confidence 3
No 167
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=80.35 E-value=10 Score=34.32 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=68.6
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCc----HHHHHHHh--CC----------chHH
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFK 104 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~Gt----lfE~a~~q--g~----------~~~~ 104 (299)
..+.+++.-+++|| +|+|+..+.+++.+++.+...++. +++++--| -+|.|+.. |. +.++
T Consensus 30 ~a~~~v~~GAdiID---Ig~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~ 106 (262)
T 1f6y_A 30 WARRQEEGGARALD---LNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAEREKVE 106 (262)
T ss_dssp HHHHHHHHTCSEEE---EBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCHHHHH
T ss_pred HHHHHHHCCCcEEE---ECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCcccHH
Confidence 34555665555555 588998899999999999999987 88888765 48888886 53 1244
Q ss_pred HHHHHHHHcCCCEEEecCCcccCC--hhHH----HHHHHHHHHcCCc
Q 022296 105 EYVEDCKQVGFDTIELNVGSLEIP--EETL----LRYVRLVKSAGLK 145 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~--~~~r----~~lI~~~~~~G~~ 145 (299)
+.++.++++|...|=....--.+| -+++ .+.++++.+.|+.
T Consensus 107 ~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 107 KLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp HHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 789999999998888764211122 2333 5677788887764
No 168
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=80.33 E-value=1.4 Score=39.47 Aligned_cols=47 Identities=19% Similarity=0.351 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||++||+....- .....+..++-+.+++.|+++.+
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~ 77 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIIS 77 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEE
Confidence 699999999999999999985211 02233456777888999999754
No 169
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=79.62 E-value=28 Score=32.24 Aligned_cols=144 Identities=15% Similarity=0.149 Sum_probs=85.7
Q ss_pred EEeeCccccc-CChhHHHHHH-HHHH--hCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC
Q 022296 57 LKFSGGSHSL-MPKPFIEEVV-KRAH--QHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP 128 (299)
Q Consensus 57 lKfg~GTs~l-~p~~~l~eKI-~l~~--~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~ 128 (299)
|-++-|+... .+.+.+...+ .+++ .++|+|.. |..+| .+..|-+.||+.|=+.--..++.
T Consensus 50 lq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e------------~i~~ai~~GFtSVMiDgS~~p~e 117 (288)
T 3q94_A 50 LGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFE------------KCKEAIDAGFTSVMIDASHHPFE 117 (288)
T ss_dssp EEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHH------------HHHHHHHHTCSEEEECCTTSCHH
T ss_pred EECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHH------------HHHHHHHcCCCeEEEeCCCCCHH
Confidence 4444444433 2444443333 3555 56666664 33444 34567788999999965554433
Q ss_pred hh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHH-
Q 022296 129 EE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCL- 205 (299)
Q Consensus 129 ~~--~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dL- 205 (299)
+- .=.++++.++..|.-|--|+|.=-+ ++|. +.. -+..+| +|++. +++.
T Consensus 118 eNi~~Tk~vv~~ah~~gvsVEaElG~vgG------~Ed~-----~~~--~~~~yT--------~Peea-------~~Fv~ 169 (288)
T 3q94_A 118 ENVETTKKVVEYAHARNVSVEAELGTVGG------QEDD-----VIA--EGVIYA--------DPAEC-------KHLVE 169 (288)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEESBCBC------SCSS-----CGG--GGCBCC--------CHHHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEeeeecc------ccCC-----cCC--ccccCC--------CHHHH-------HHHHH
Confidence 21 2236788889999999999998311 1221 000 001112 25555 6666
Q ss_pred HccCcEEEEe---ccccccCCCcccHHHHHHHHhccCC
Q 022296 206 EAGADMIMID---SDDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 206 eAGA~~VIiE---argi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
+-|.|.+=+= +-|.|..+-.++.|.+++|-+.++.
T Consensus 170 ~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~v 207 (288)
T 3q94_A 170 ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGV 207 (288)
T ss_dssp HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCS
T ss_pred HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCC
Confidence 4798876553 2389988888999999999887753
No 170
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=79.50 E-value=13 Score=33.82 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=56.0
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC-C--cHHHHHHHh--CCch---HHHHHHHHHH
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWAEHLIRN--GPSA---FKEYVEDCKQ 112 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-G--tlfE~a~~q--g~~~---~~~yl~~~k~ 112 (299)
..+.++++..-+..+ +.+. +.+...-++.++.++++|+..++ | ++-+..+.+ .... .-+-++.+++
T Consensus 126 ~~~~~l~~~ik~~~~-i~i~-----~s~g~~~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~ 199 (350)
T 3t7v_A 126 NRFVELVQIVKEELG-LPIM-----ISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQ 199 (350)
T ss_dssp HHHHHHHHHHHHHHC-SCEE-----EECSSCCHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC-ceEE-----EeCCCCCHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 455677666543222 2221 12222346788889999995444 4 443333321 1123 4455677888
Q ss_pred cCCCEEEecCCcc---cCChhHHHHHHHHHHHcCCc
Q 022296 113 VGFDTIELNVGSL---EIPEETLLRYVRLVKSAGLK 145 (299)
Q Consensus 113 lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~~ 145 (299)
.|+. ++.+.+ .=+.+++.+.++.+++.+..
T Consensus 200 ~Gi~---v~~~~i~Glget~e~~~~~l~~l~~l~~~ 232 (350)
T 3t7v_A 200 QGYC---VEDGILTGVGNDIESTILSLRGMSTNDPD 232 (350)
T ss_dssp HTCE---EEEEEEESSSCCHHHHHHHHHHHHHTCCS
T ss_pred cCCe---EccceEeecCCCHHHHHHHHHHHHhCCCC
Confidence 9985 333332 45678899999999998754
No 171
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=79.13 E-value=7.9 Score=35.67 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt---i~i~~~~r~~lI~~~~~~G~~-v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.+.++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+.- . +.-=+|+ |
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGv-------g----------------- 84 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGV-------S----------------- 84 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEEC-------C-----------------
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEec-------C-----------------
Confidence 67888999999999999665333 3699999999999998852 1 1001122 1
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEe
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMID 215 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiE 215 (299)
..+..+. |+.++..-++|||.|++=
T Consensus 85 ----------~~~t~~a---i~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 85 ----------APGFAAM---RRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp ----------CSSHHHH---HHHHHHHHHHTCSEEEEC
T ss_pred ----------CCCHHHH---HHHHHHHHHcCCCEEEEC
Confidence 1125566 888899999999999984
No 172
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=79.07 E-value=7.1 Score=34.10 Aligned_cols=109 Identities=14% Similarity=0.129 Sum_probs=64.3
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc------ccCChhHHHHHHHHHHhCCceecC----Cc----HH---HHHHHhCCchH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDVYVST----GD----WA---EHLIRNGPSAF 103 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs------~l~p~~~l~eKI~l~~~~gV~v~~----Gt----lf---E~a~~qg~~~~ 103 (299)
.+++.++.+.+. +|.+=+.+... .-.+.+.+++.-++++++|+.+.. +. |. +....+.-+.+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 110 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM 110 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHH
Confidence 445555544433 67777765432 123456688999999999997752 11 10 11111111268
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--cC-ChhH-------HHHHHHHHHHcCCccccee
Q 022296 104 KEYVEDCKQVGFDTIELNVGSL--EI-PEET-------LLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti--~i-~~~~-------r~~lI~~~~~~G~~v~~E~ 150 (299)
++.++.|+++|.+.|=+..+.. .. ..+. ..++.+.+++.|.++.-|-
T Consensus 111 ~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 167 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEI 167 (295)
T ss_dssp HHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEee
Confidence 9999999999999998864332 11 1222 3345556677787755554
No 173
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=78.99 E-value=14 Score=35.62 Aligned_cols=152 Identities=19% Similarity=0.238 Sum_probs=97.6
Q ss_pred CceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeeecCCC
Q 022296 83 DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVMFNKS 157 (299)
Q Consensus 83 gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~s 157 (299)
||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||++...+..+.- .
T Consensus 6 GiSvY~~~~~~~--------~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l-~ 76 (372)
T 2p0o_A 6 GISVFLGEEITN--------DTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEAL-K 76 (372)
T ss_dssp EEECCTTSCCCH--------HHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHH-H
T ss_pred EEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHH-H
Confidence 6677776 3443 3458999999999999976644322 12345568889999999998877765311 0
Q ss_pred CCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------ccccCCC
Q 022296 158 DIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------DVCKHAD 224 (299)
Q Consensus 158 evg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------gi~d~~G 224 (299)
..| ++.+.+ +..-+.|++-+=++-- -|.=+.-
T Consensus 77 ~Lg----------------------------~s~~dl-------~~~~~lGi~glRLD~Gf~~~eia~ls~nlkIeLNAS 121 (372)
T 2p0o_A 77 RAG----------------------------FSFDEL-------EPLIELGVTGLRMDYGITIEQMAHASHKIDIGLNAS 121 (372)
T ss_dssp TTT----------------------------CBTTBC-------HHHHHHTCCEEEECSSCCHHHHHHHHTTSEEEEETT
T ss_pred HcC----------------------------CCHHHH-------HHHHHcCCCEEEEcCCCCHHHHHHHhcCCEEEEECc
Confidence 111 112333 4456668888887762 2444555
Q ss_pred cccHHHHHHHHhc-cCCCceEEec-----CCch---------hHHHHHHHhCCCcccccCCCC---------chhhhhhh
Q 022296 225 SLRADIIAKVIGR-LGLEKTMFEA-----TNPR---------TSEWFIRRYGPKVNLFVDHSQ---------VMDLECLR 280 (299)
Q Consensus 225 ~~r~d~i~~ii~~-l~~eklifEA-----P~k~---------qQ~~fI~~fG~~VNLgI~~~e---------Vi~LE~LR 280 (299)
++.++.++.|++. ...++| +| |+|. ++...+++||-+|=-||+-+. +.-||.-|
T Consensus 122 ti~~~~l~~l~~~~~n~~~l--~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPl~eGLPTLE~HR 199 (372)
T 2p0o_A 122 TITLEEVAELKAHQADFSRL--EAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQTRGPIFAGLPTLEKHR 199 (372)
T ss_dssp TCCHHHHHHHHHTTCCGGGE--EEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSSCCTTTCSCCCSBGGGT
T ss_pred cCCHHHHHHHHHcCCChHHe--EEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCccCCCccCCCCchHHhC
Confidence 6688889988853 336665 34 4443 377888999977776788754 45566666
No 174
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=78.86 E-value=4.4 Score=36.25 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=28.4
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCcc-------cC--ChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQ-VGFDTIELNVGSL-------EI--PEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti-------~i--~~~~r~~lI~~~~~~ 142 (299)
.+.+..+.+.+ .|||.|||+=++- .+ +.+...++|+.+++.
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~ 162 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV 162 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh
Confidence 46666677777 8999999975432 11 444557888888875
No 175
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=78.52 E-value=5.5 Score=37.13 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=72.5
Q ss_pred HHHHhCCceecC-C--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHc
Q 022296 77 KRAHQHDVYVST-G--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSA 142 (299)
Q Consensus 77 ~l~~~~gV~v~~-G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~ 142 (299)
.+++..++++.- + || .+|..+-+-.+...+.|..+|-|-|+.. -+|.++-++-|+.+++.
T Consensus 77 ~I~r~~~~PviaD~d~Gy------g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A 150 (298)
T 3eoo_A 77 RITNATNLPLLVDIDTGW------GGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDA 150 (298)
T ss_dssp HHHHHCCSCEEEECTTCS------SSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCC------CCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHh
Confidence 345566776553 2 23 1222334445666678999999999874 36788777777777664
Q ss_pred CCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccC
Q 022296 143 GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKH 222 (299)
Q Consensus 143 G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~ 222 (299)
-- -+.|-+. . .-|. + + . -.+++. |++++...+||||.|.+|+-
T Consensus 151 ~~--~~~~~I~---A----RTDa-~--------~-~----------~gldea---i~Ra~ay~~AGAD~if~~~~----- 193 (298)
T 3eoo_A 151 RT--DETFVIM---A----RTDA-A--------A-A----------EGIDAA---IERAIAYVEAGADMIFPEAM----- 193 (298)
T ss_dssp CS--STTSEEE---E----EECT-H--------H-H----------HHHHHH---HHHHHHHHHTTCSEEEECCC-----
T ss_pred cc--CCCeEEE---E----eehh-h--------h-h----------cCHHHH---HHHHHhhHhcCCCEEEeCCC-----
Confidence 10 1233331 1 0110 0 0 0 115667 99999999999999999984
Q ss_pred CCcccHHHHHHHHhccC
Q 022296 223 ADSLRADIIAKVIGRLG 239 (299)
Q Consensus 223 ~G~~r~d~i~~ii~~l~ 239 (299)
-..+++.++.+.++
T Consensus 194 ---~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 194 ---KTLDDYRRFKEAVK 207 (298)
T ss_dssp ---CSHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHcC
Confidence 14777888887776
No 176
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=78.48 E-value=28 Score=37.98 Aligned_cols=146 Identities=9% Similarity=0.023 Sum_probs=98.0
Q ss_pred cccEEEeeCcccccCChhHHHHHHHHHHhCCcee----cCCcHHHHHHH--hCCchHHHHHHHHHHcCCCEEEecCCccc
Q 022296 53 FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV----STGDWAEHLIR--NGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (299)
Q Consensus 53 yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v----~~GtlfE~a~~--qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (299)
-+|.+-+-.. +-.-+.++.-++.++++|..+ +..+-||-... .+++.+-+..+.+.+.|.+.|=|-|-.--
T Consensus 658 g~d~irif~s---l~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~ 734 (1165)
T 2qf7_A 658 GIDLFRVFDC---LNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGL 734 (1165)
T ss_dssp TCCEEEEECT---TCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCC
T ss_pred CcCEEEEEee---HHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCC
Confidence 4777766432 445668999999999999643 22221232222 22234566667777899999999999988
Q ss_pred CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHH
Q 022296 127 IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLE 206 (299)
Q Consensus 127 i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLe 206 (299)
+.+.+-.++|+.++++ + ...+++.+.. | .... +-.+...++
T Consensus 735 ~~P~~~~~lv~~l~~~-~--~~~i~~H~Hn-------d--------------------------~GlA---vAn~laAv~ 775 (1165)
T 2qf7_A 735 LKPAAAKVLFKALREA-T--GLPIHFHTHD-------T--------------------------SGIA---AATVLAAVE 775 (1165)
T ss_dssp CCHHHHHHHHHHHHHH-C--SSCEEEEECB-------T--------------------------TSCH---HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHh-c--CCeEEEEECC-------C--------------------------CCHH---HHHHHHHHH
Confidence 9999989999999985 2 2235553221 1 2223 556688999
Q ss_pred ccCcEEEEeccccccCCCcccHHHHHHHHhccCC
Q 022296 207 AGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 207 AGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
|||+.|=.=-.|+=...||...+.+-..+...+.
T Consensus 776 aGa~~vd~ti~GlGe~~Gn~~le~vv~~L~~~g~ 809 (1165)
T 2qf7_A 776 AGVDAVDAAMDALSGNTSQPCLGSIVEALSGSER 809 (1165)
T ss_dssp TTCSEEEEBCGGGCSBTSCCBHHHHHHHHTTSTT
T ss_pred hCCCEEEecccccCCCccchhHHHHHHHHHhcCC
Confidence 9999653333488888899888877767766553
No 177
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=77.87 E-value=9.3 Score=33.16 Aligned_cols=110 Identities=11% Similarity=0.153 Sum_probs=66.9
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-c------HH---HHHHHhCCchHHHHHHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WA---EHLIRNGPSAFKEYVEDC 110 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-t------lf---E~a~~qg~~~~~~yl~~~ 110 (299)
.+++.++.+.+. .|.+=+......-+..+.+++.-++++++|+.+... + |. +....+.-+.+++.++.|
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356666666655 677777755433345677999999999999976542 1 11 111111112688899999
Q ss_pred HHcCCCEEEe--cCCcc-----cCCh-hH-------HHHHHHHHHHcCCcccceee
Q 022296 111 KQVGFDTIEL--NVGSL-----EIPE-ET-------LLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 111 k~lGF~~IEI--SdGti-----~i~~-~~-------r~~lI~~~~~~G~~v~~E~g 151 (299)
+++|.+.|-+ ..|.- ..+. +. ..++.+.+++.|.++.-|-.
T Consensus 98 ~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 98 YKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEec
Confidence 9999999963 33321 1222 22 23455667777887555543
No 178
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=77.75 E-value=44 Score=30.86 Aligned_cols=147 Identities=8% Similarity=0.097 Sum_probs=85.2
Q ss_pred EEEeeCcccccCChh-HHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh
Q 022296 56 GLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE 130 (299)
Q Consensus 56 ~lKfg~GTs~l~p~~-~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~ 130 (299)
+|-++-|+...++.+ ...--..++++++|+|.. |. + .+.+..|-+.||+.|=+.--..++.+-
T Consensus 46 Ilq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~-----------~-~e~i~~ai~~GFtSVMiDgS~lp~eeN 113 (286)
T 1gvf_A 46 ILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHE-----------S-LDDIRRKVHAGVRSAMIDGSHFPFAEN 113 (286)
T ss_dssp EEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEEC-----------C-HHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred EEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCC-----------C-HHHHHHHHHcCCCeEEECCCCCCHHHH
Confidence 345555554444422 223333455566666664 21 1 255667788999999886554443222
Q ss_pred --HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHH-Hc
Q 022296 131 --TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCL-EA 207 (299)
Q Consensus 131 --~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dL-eA 207 (299)
.=.++++.++..|.-|--|+|.= |-.+|. +.-...+..+| +|++. +++. +-
T Consensus 114 i~~Tk~vv~~ah~~gvsVEaElG~v------gg~ed~-----~~~~~~~~~~T--------~Peea-------~~Fv~~T 167 (286)
T 1gvf_A 114 VKLVKSVVDFCHSQDCSVEAELGRL------GGVEDD-----MSVDAESAFLT--------DPQEA-------KRFVELT 167 (286)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCC------C----------------CCSSC--------CHHHH-------HHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeec------cCcccC-----cccccccccCC--------CHHHH-------HHHHHHH
Confidence 12467888889999999999983 111220 00000001111 25555 6666 47
Q ss_pred cCcEEEEec---cccccCCCcccHHHHHHHHhccCC
Q 022296 208 GADMIMIDS---DDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 208 GA~~VIiEa---rgi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
|.|.+=+== -|+|..+-.++.|.+++|-+.+++
T Consensus 168 gvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~v 203 (286)
T 1gvf_A 168 GVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDV 203 (286)
T ss_dssp CCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCS
T ss_pred CCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCC
Confidence 888654432 289998889999999999988763
No 179
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=77.72 E-value=31 Score=29.10 Aligned_cols=85 Identities=14% Similarity=0.235 Sum_probs=49.3
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCCh-hHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-PFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~-~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
.+++.+++.-. |++=++ +.++.++ +.+.+-++.+|++ |..+..+. ...++ ...+.+.|.|+
T Consensus 79 ~~i~~~~~~Ga---d~v~l~--~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~----------~t~~e-~~~~~~~G~d~ 142 (223)
T 1y0e_A 79 KEVDELIESQC---EVIALD--ATLQQRPKETLDELVSYIRTHAPNVEIMADI----------ATVEE-AKNAARLGFDY 142 (223)
T ss_dssp HHHHHHHHHTC---SEEEEE--CSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC----------SSHHH-HHHHHHTTCSE
T ss_pred HHHHHHHhCCC---CEEEEe--eecccCcccCHHHHHHHHHHhCCCceEEecC----------CCHHH-HHHHHHcCCCE
Confidence 45555555443 555554 3444433 4578888888888 87665431 12333 34578899999
Q ss_pred EEecCC-cc----cCC-hhHHHHHHHHHHH
Q 022296 118 IELNVG-SL----EIP-EETLLRYVRLVKS 141 (299)
Q Consensus 118 IEISdG-ti----~i~-~~~r~~lI~~~~~ 141 (299)
|=++.. +. ... .....++++.+++
T Consensus 143 i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~ 172 (223)
T 1y0e_A 143 IGTTLHGYTSYTQGQLLYQNDFQFLKDVLQ 172 (223)
T ss_dssp EECTTTTSSTTSTTCCTTHHHHHHHHHHHH
T ss_pred EEeCCCcCcCCCCCCCCCcccHHHHHHHHh
Confidence 987653 21 111 2334567777776
No 180
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=77.42 E-value=16 Score=31.55 Aligned_cols=69 Identities=16% Similarity=0.297 Sum_probs=48.7
Q ss_pred HHHHHHHHhC-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 73 EEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 73 ~eKI~l~~~~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+-|+-.+++ ++++..++.....+.. .++++++.|.+.|.+.|-+. +++.++..++++.+++.|.++.+
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~---~~~~~~~~~~~~Gad~v~~~----~~~~~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRA---GVRNFLAEAKASGVDGILVV----DLPVFHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHH---CHHHHHHHHHHHTCCEEEET----TCCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhc---CHHHHHHHHHHCCCCEEEEC----CCChhhHHHHHHHHHHhCCCeEE
Confidence 3445555544 6666666644444555 47899999999999999996 34456677899999998877554
No 181
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=77.29 E-value=10 Score=36.00 Aligned_cols=82 Identities=23% Similarity=0.328 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccC-------ChhHHHHHHHHHHHc--CCc--ccceeeeecCCCCCCCccccccc
Q 022296 102 AFKEYVEDCKQVG--FDTIELNVGSLEI-------PEETLLRYVRLVKSA--GLK--AKPKFAVMFNKSDIPSDRDRAFG 168 (299)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i-------~~~~r~~lI~~~~~~--G~~--v~~E~gvK~~~sevg~~~d~~~~ 168 (299)
..++|.+.++.++ .|+|||+-++=.. .++.-.++++.+++. -+. +..=+.+|-.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~------------- 228 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIA------------- 228 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-------------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeC-------------
Confidence 7889999888887 8999999875332 234445677766542 110 1112455521
Q ss_pred ccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 169 AYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
| +++.+++ .+-++...++|||.|++=.+
T Consensus 229 ----p--------------~~~~~~~---~~ia~~~~~aGadgi~v~nt 256 (367)
T 3zwt_A 229 ----P--------------DLTSQDK---EDIASVVKELGIDGLIVTNT 256 (367)
T ss_dssp ----S--------------CCCHHHH---HHHHHHHHHHTCCEEEECCC
T ss_pred ----C--------------CCCHHHH---HHHHHHHHHcCCCEEEEeCC
Confidence 1 1123455 67788899999999998765
No 182
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=77.27 E-value=6.3 Score=34.73 Aligned_cols=133 Identities=12% Similarity=0.048 Sum_probs=77.4
Q ss_pred hhHHHHHHHhhcccccEEEeeCcccccCCh---hHHHHHHHHHHhCCceecCC----cHHHHHHHh--CCchHHHHHHHH
Q 022296 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG----DWAEHLIRN--GPSAFKEYVEDC 110 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~---~~l~eKI~l~~~~gV~v~~G----tlfE~a~~q--g~~~~~~yl~~~ 110 (299)
....+..++.-.+.||+. +-.|+. ..+ +.+++-++++|++|+++... |. +. .. .++.+.+..+.+
T Consensus 102 ~~~v~~a~~~Ga~~v~~~-l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~--~l-~~~~~~~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIH-VNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGK--HI-QNERDPELVAHAARLG 175 (273)
T ss_dssp CSCHHHHHHTTCSEEEEE-EEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEECST--TC-SCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEE-EecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCc--cc-CCCCCHhHHHHHHHHH
Confidence 347788888776777552 222322 111 25778889999999866542 11 00 01 112455555888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCcc
Q 022296 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEI 189 (299)
Q Consensus 111 k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (299)
.+.|.|+|=+|.. .+ .+.++.+++. ...++..=|+. . .
T Consensus 176 ~~~Gad~i~~~~~---~~----~~~l~~i~~~~~ipvva~GGi~-------~-------------------------~-- 214 (273)
T 2qjg_A 176 AELGADIVKTSYT---GD----IDSFRDVVKGCPAPVVVAGGPK-------T-------------------------N-- 214 (273)
T ss_dssp HHTTCSEEEECCC---SS----HHHHHHHHHHCSSCEEEECCSC-------C-------------------------S--
T ss_pred HHcCCCEEEECCC---CC----HHHHHHHHHhCCCCEEEEeCCC-------C-------------------------C--
Confidence 9999999999852 22 2445555442 22222211220 0 0
Q ss_pred chhhhhhhHHHHHHHHHccCcEEEEeccccccCC
Q 022296 190 EVGVGINKSRRAERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 190 ~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~ 223 (299)
+.+.+ ++.++..+++||+.|++ ++.|+.+.
T Consensus 215 ~~~~~---~~~~~~~~~~Ga~gv~v-g~~i~~~~ 244 (273)
T 2qjg_A 215 TDEEF---LQMIKDAMEAGAAGVAV-GRNIFQHD 244 (273)
T ss_dssp SHHHH---HHHHHHHHHHTCSEEEC-CHHHHTSS
T ss_pred CHHHH---HHHHHHHHHcCCcEEEe-eHHhhCCC
Confidence 13445 66678888999999999 88888765
No 183
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=77.22 E-value=20 Score=32.08 Aligned_cols=165 Identities=11% Similarity=0.095 Sum_probs=98.8
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCCh---hHHHHHHHHHHhCCceec-CC-cHH----
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVS-TG-DWA---- 92 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~---~~l~eKI~l~~~~gV~v~-~G-tlf---- 92 (299)
+..|+..|. .|. .+...+..++.+..| +.+..+.|-+.-+.. +.+.+..+++.+. |-+= .| .+.
T Consensus 24 ~~~gV~~i~-v~~----~~~~~~~~~~la~~~-~~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~-vaIGEiGLD~~~~~~ 96 (254)
T 3gg7_A 24 EERQLTVLS-VTT----TPAAWRGTLALAAGR-PHVWTALGFHPEVVSERAADLPWFDRYLPET-RFVGEVGLDGSPSLR 96 (254)
T ss_dssp HHTTCEEEE-CCS----SGGGHHHHHGGGTTC-TTEEECBCCCGGGTTTTGGGTHHHHHHGGGC-SEEEEEECCCCGGGG
T ss_pred HHCCCcEEE-ecC----CHHHHHHHHHHHHhC-CCeEEEEeeCcccccccHHHHHHHHHHhhhc-cEEEEEecCCCcccC
Confidence 356888776 476 566999999999998 557788887664331 3455555665432 2221 13 221
Q ss_pred H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022296 93 E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (299)
Q Consensus 93 E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~ 171 (299)
. ...++. .|...++.|+++|...|-|=..- ..+ ++++.+++.+.. --++-...+ +
T Consensus 97 ~~~~~Q~~--~F~~ql~lA~e~~lPviSiH~r~---a~~---~~~~il~~~~~~---~~~v~H~fs-----G-------- 152 (254)
T 3gg7_A 97 GTWTQQFA--VFQHILRRCEDHGGRILSIHSRR---AES---EVLNCLEANPRS---GTPILHWYS-----G-------- 152 (254)
T ss_dssp GGHHHHHH--HHHHHHHHHHHTTCEEEEEECTT---CHH---HHHHHHHHCGGG---EEEEEETCC-----S--------
T ss_pred CCHHHHHH--HHHHHHHHHHHcCCCEEEEEcCC---cHH---HHHHHHHHcCCC---CcEEEEeCC-----C--------
Confidence 1 223443 79999999999999987332221 223 455666654211 011321111 0
Q ss_pred cCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc-cccCCCcccHHHHHHHHhccCCCceEEecCCc
Q 022296 172 ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEKTMFEATNP 250 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg-i~d~~G~~r~d~i~~ii~~l~~eklifEAP~k 250 (299)
+ .+++++.++.|.+.=+- | ++ +.+.+.++++.+|+++|++|...|
T Consensus 153 ----------------~---------~e~a~~~l~~G~yis~~---g~~~------~~~~~~~~v~~ip~drlLlETD~P 198 (254)
T 3gg7_A 153 ----------------S---------VTELRRAISLGCWFSVG---PTMV------RTQKGAALIRSMPRDRVLTETDGP 198 (254)
T ss_dssp ----------------C---------HHHHHHHHHTTCEEEEC---HHHH------TSHHHHHHHHHSCGGGEEECCCTT
T ss_pred ----------------C---------HHHHHHHHcCCcEEEEC---cccC------chHHHHHHHHHcCCCeEEEeCCCC
Confidence 1 44558889998665221 2 23 345678899999999999998776
Q ss_pred h
Q 022296 251 R 251 (299)
Q Consensus 251 ~ 251 (299)
-
T Consensus 199 ~ 199 (254)
T 3gg7_A 199 F 199 (254)
T ss_dssp T
T ss_pred c
Confidence 3
No 184
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=77.12 E-value=1.5 Score=41.36 Aligned_cols=71 Identities=25% Similarity=0.393 Sum_probs=40.8
Q ss_pred ChhHHHHHHHHHHhC---C----ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHH
Q 022296 68 PKPFIEEVVKRAHQH---D----VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRY 135 (299)
Q Consensus 68 p~~~l~eKI~l~~~~---g----V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-----i~~~~r~~l 135 (299)
....+.|.|+-.++. + |++++.+|.+--+ ..+...++.+.+.+. .|+|+||.|... .++....++
T Consensus 192 R~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~--~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~ 268 (343)
T 3kru_A 192 RARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGI--NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKY 268 (343)
T ss_dssp HTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSC--CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCc--cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehH
Confidence 335677888887765 3 3566655543100 001334455666667 999999877532 233334566
Q ss_pred HHHHHH
Q 022296 136 VRLVKS 141 (299)
Q Consensus 136 I~~~~~ 141 (299)
++.+++
T Consensus 269 ~~~ir~ 274 (343)
T 3kru_A 269 AETIKK 274 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777766
No 185
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=77.05 E-value=13 Score=38.66 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=71.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
.+++++.+.+.|.+.|-|.+..-++ +.....|+.+++.|..|. +.+... .++ .| |+ ..
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~l--~~l~~~i~~ak~~G~~v~--~~i~~~-~d~---~d--------p~--r~---- 256 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNYL--PNMLLGMEAAGSAGGVVE--AAISYT-GDV---AD--------PS--RT---- 256 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCCH--HHHHHHHHHHHTTTSEEE--EEEECC-SCT---TC--------TT--CC----
T ss_pred hHHHHHHHHhcCcCEEEEEecHHHH--HHHHHHHHHHHHcCCeEE--EEEEee-ccc---cC--------CC--CC----
Confidence 6899999999999999999866543 466678999999996543 344321 111 12 11 00
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
..+++.+ ++.++...++||+.| .|+|..|-.....+.++++.
T Consensus 257 -----~~~~e~~---~~~a~~l~~~Ga~~I-----~l~DT~G~~~P~~v~~lV~~ 298 (718)
T 3bg3_A 257 -----KYSLQYY---MGLAEELVRAGTHIL-----CIKDMAGLLKPTACTMLVSS 298 (718)
T ss_dssp -----TTCHHHH---HHHHHHHHHHTCSEE-----EEECTTSCCCHHHHHHHHHH
T ss_pred -----CCCHHHH---HHHHHHHHHcCCCEE-----EEcCcCCCcCHHHHHHHHHH
Confidence 1237788 899999999999866 47889999888888777753
No 186
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=76.95 E-value=15 Score=34.87 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=43.3
Q ss_pred CChhHHHHHHHHHHhCC---ceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHH
Q 022296 67 MPKPFIEEVVKRAHQHD---VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~g---V~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS--dGti~i~~~~r~~lI~~~~~ 141 (299)
++.+.+.+-|+..++++ |-...|+ . ....+.++.+.+.|.+.|+|. .| +.+...+.|+.+++
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~vg~-------~--~~~~~~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAAVGA-------A--PGNEERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRA 145 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEECCS-------C--TTCHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEEecc-------C--hhHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHH
Confidence 45666888888888764 3332332 1 246778899999999999993 34 23456678888888
Q ss_pred c
Q 022296 142 A 142 (299)
Q Consensus 142 ~ 142 (299)
.
T Consensus 146 ~ 146 (366)
T 4fo4_A 146 A 146 (366)
T ss_dssp H
T ss_pred h
Confidence 5
No 187
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=76.75 E-value=15 Score=35.30 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCCEEEec--------------CCcccCChhHHHHHHHHHHHcCCcccceeeeec
Q 022296 104 KEYVEDCKQVGFDTIELN--------------VGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMF 154 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS--------------dGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~ 154 (299)
++.++.++++|+++|-|- .|. -+.+.-+.++++|+++||+|.-.|+..+
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~--~d~~~~~~~a~~Ak~~GLkVlldfHysD 113 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN--NDLEKAIQIGKRATANGMKLLADFHYSD 113 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC--CCHHHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCC--CCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 346888899999999981 122 3467778899999999999999887643
No 188
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=76.75 E-value=8.2 Score=36.33 Aligned_cols=108 Identities=9% Similarity=0.118 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+....|+ +|+ .+
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi--aGv---g~--------------------- 101 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI--VGT---GA--------------------- 101 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE--EEC---CC---------------------
T ss_pred HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE--Eec---CC---------------------
Confidence 5677788888888888876544 346899999999988322222222 233 10
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecccccc-CCCcccHHHHHHHHh-ccCCCceEEecC
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCK-HADSLRADIIAKVIG-RLGLEKTMFEAT 248 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d-~~G~~r~d~i~~ii~-~l~~eklifEAP 248 (299)
.+..+. |+.++..-++|||.|++=.--.+. .+.+---+-..+|++ ..++-=++.--|
T Consensus 102 ----------~st~ea---i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 102 ----------VNTASA---VAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp ----------SSHHHH---HHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred ----------CCHHHH---HHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 114455 788888888899988886543222 111101112234555 555555666666
No 189
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=76.73 E-value=4.5 Score=36.03 Aligned_cols=47 Identities=13% Similarity=0.246 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CCh----hHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPE----ETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~--i~~----~~r~~lI~~~~~~G~~v~~ 148 (299)
..+..++.++++||++||+...... .|. ++..++-+.+++.|+++..
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 4566678889999999999876543 122 2566777888899998754
No 190
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=76.50 E-value=32 Score=32.72 Aligned_cols=109 Identities=19% Similarity=0.252 Sum_probs=70.5
Q ss_pred chhHHHHHHHhhcc--cccEEEeeCcccccCChhHHHHHHHHHHhC-Cc-eecCCcHHHHHHHhCCchHHHHHHHHHHcC
Q 022296 39 SHNVLEDIFESMGQ--FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVG 114 (299)
Q Consensus 39 g~~~l~DlLe~ag~--yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lG 114 (299)
....+..+++.+.+ -+.-+-|.+|--.+.+.+.|.+.++.+++. ++ .+..+|-.=+.+-+- --+++++.+++.
T Consensus 146 s~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~--it~e~l~~L~~~- 222 (416)
T 2a5h_A 146 PMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQR--ITPELVNMLKKY- 222 (416)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGG--CCHHHHHHHGGG-
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEeccccccccc--CCHHHHHHHHhc-
Confidence 45677777776654 367799999999999977799999999987 44 233333110011010 115677777777
Q ss_pred CCEEEecC---CcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 115 FDTIELNV---GSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 115 F~~IEISd---Gti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.|-||- +.-.|. ++..+.|+++++.|+.+....-+
T Consensus 223 -~~v~Isl~~~~~~ei~-~~v~~ai~~L~~aGi~v~i~~vl 261 (416)
T 2a5h_A 223 -HPVWLNTHFNHPNEIT-EESTRACQLLADAGVPLGNQSVL 261 (416)
T ss_dssp -CSEEEEECCCSGGGCC-HHHHHHHHHHHHTTCCEEEEEEC
T ss_pred -CcEEEEEecCCHHHHh-HHHHHHHHHHHHcCCEEEEEEEE
Confidence 5555542 333555 67789999999999875554433
No 191
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=76.30 E-value=23 Score=32.71 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=19.5
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEeccc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSDD 218 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEarg 218 (299)
.++. ++.++..-++|+++|-+=++.
T Consensus 228 ~~~~---~~~a~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 228 IADH---IGFAKWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp HHHH---HHHHHHHHHTTCCEEEEECCC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEecCc
Confidence 4556 777888889999999986653
No 192
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=76.26 E-value=2.3 Score=39.80 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=75.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~ 171 (299)
+.+-++...+.|..+|-|-|... -+|.++-++-|+.+++.-=..-++|-+- .. -|. +
T Consensus 97 v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~---AR----TDa-~---- 164 (302)
T 3fa4_A 97 VARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVI---AR----TDS-L---- 164 (302)
T ss_dssp HHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEE---EE----ECC-H----
T ss_pred HHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEE---EE----ecc-c----
Confidence 44445666778999999998764 3577776666666655200001233331 11 110 0
Q ss_pred cCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE---EecC
Q 022296 172 ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM---FEAT 248 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli---fEAP 248 (299)
+ . ..+++. |++++...+||||.|.+|+- -..+.+.+|.+.++.--++ .|-+
T Consensus 165 ----~----~-------~gldeA---i~Ra~ay~eAGAD~ifi~g~--------~~~~ei~~~~~~~~~~Pl~~n~~~~g 218 (302)
T 3fa4_A 165 ----Q----T-------HGYEES---VARLRAARDAGADVGFLEGI--------TSREMARQVIQDLAGWPLLLNMVEHG 218 (302)
T ss_dssp ----H----H-------HCHHHH---HHHHHHHHTTTCSEEEETTC--------CCHHHHHHHHHHTTTSCEEEECCTTS
T ss_pred ----c----c-------CCHHHH---HHHHHHHHHcCCCEEeecCC--------CCHHHHHHHHHHhcCCceeEEEecCC
Confidence 0 0 115667 99999999999999999983 1356788888877422222 3332
Q ss_pred C-chhHHHHHHHhCCCcccccCCCCch
Q 022296 249 N-PRTSEWFIRRYGPKVNLFVDHSQVM 274 (299)
Q Consensus 249 ~-k~qQ~~fI~~fG~~VNLgI~~~eVi 274 (299)
. |..-..=+...| ||+-|=|...+
T Consensus 219 ~~p~~~~~eL~~lG--v~~v~~~~~~~ 243 (302)
T 3fa4_A 219 ATPSISAAEAKEMG--FRIIIFPFAAL 243 (302)
T ss_dssp SSCCCCHHHHHHHT--CSEEEETTTTH
T ss_pred CCCCCCHHHHHHcC--CCEEEEchHHH
Confidence 1 222233356667 45653344443
No 193
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=76.23 E-value=28 Score=31.87 Aligned_cols=98 Identities=21% Similarity=0.307 Sum_probs=62.6
Q ss_pred HHHHHHcCCCEEEecCCcc-----cCChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCcccccccccccCCCCc
Q 022296 107 VEDCKQVGFDTIELNVGSL-----EIPEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRS 177 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti-----~i~~~~r~~lI~~~~~~----G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~ 177 (299)
.+..-+.|..+|-|-|+.. -+|.++.++-|+.+++. |.. |-+.- . .| ++ +.. +.
T Consensus 98 v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~----~~i~a-R------td-a~---~~~--~g 160 (275)
T 2ze3_A 98 VEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVP----VFLNA-R------TD-TF---LKG--HG 160 (275)
T ss_dssp HHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSC----CEEEE-E------CC-TT---TTT--CS
T ss_pred HHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCC----eEEEE-e------ch-hh---hcc--cc
Confidence 3444458999999999873 46777888888888775 433 33320 0 11 00 000 00
Q ss_pred cchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 178 TDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
.. + .-..+++ |++++...+||||.|.+|+- ...+++.+|.+.++
T Consensus 161 ~~------~-~~~~~~a---i~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 161 AT------D-EERLAET---VRRGQAYADAGADGIFVPLA--------LQSQDIRALADALR 204 (275)
T ss_dssp SS------H-HHHHHHH---HHHHHHHHHTTCSEEECTTC--------CCHHHHHHHHHHCS
T ss_pred cc------c-hhhHHHH---HHHHHHHHHCCCCEEEECCC--------CCHHHHHHHHHhcC
Confidence 00 0 0015677 99999999999999999973 23578888888776
No 194
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=76.20 E-value=36 Score=29.05 Aligned_cols=168 Identities=18% Similarity=0.213 Sum_probs=92.2
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCC----hhHHHHHHHHHHhC--Cceec--CC-cH-
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP----KPFIEEVVKRAHQH--DVYVS--TG-DW- 91 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p----~~~l~eKI~l~~~~--gV~v~--~G-tl- 91 (299)
+..|+|.+++.|.+ +...+.+++.+-.|=+ +..+.|.+.... ++.+++.-+++.++ .+.-. .| .+
T Consensus 29 ~~~Gv~~~v~~~~~----~~~~~~~~~l~~~~~~-~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGEiGld~~ 103 (259)
T 1zzm_A 29 AQAGVGKIIVPATE----AENFARVLALAENYQP-LYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLF 103 (259)
T ss_dssp HHTTEEEEEEECCS----GGGHHHHHHHHHHCTT-EEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEEEEEECC
T ss_pred HHcCCCEEEEecCC----HHHHHHHHHHHHhCCC-eEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 45799999988874 4466777777777766 667777654332 23455555566552 22111 02 11
Q ss_pred --HH-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccc
Q 022296 92 --AE-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFG 168 (299)
Q Consensus 92 --fE-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~ 168 (299)
.+ ...+.. .|...++.|+++|...+ |-.+. ..+ ++++.+++.+..+ - ++-...+ +
T Consensus 104 ~~~~~~~~q~~--~f~~~~~~a~~~~~Pv~-iH~~~---a~~---~~~~il~~~~~~~--~-~i~H~~~-----g----- 161 (259)
T 1zzm_A 104 GDDPQFERQQW--LLDEQLKLAKRYDLPVI-LHSRR---THD---KLAMHLKRHDLPR--T-GVVHGFS-----G----- 161 (259)
T ss_dssp SSCCCHHHHHH--HHHHHHHHHHHTTCCEE-EEEES---CHH---HHHHHHHHHCCTT--C-EEETTCC-----S-----
T ss_pred CCCCCHHHHHH--HHHHHHHHHHHhCCcEE-EEecc---cHH---HHHHHHHhcCCCC--C-EEEEcCC-----C-----
Confidence 00 122332 68889999999998855 33322 233 4555555544321 0 1211110 0
Q ss_pred ccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC
Q 022296 169 AYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP 248 (299)
+ .+.+++.++.|.+.-+ -+.-.|.. ...+.++++.+|++||+||..
T Consensus 162 -------------------~---------~~~~~~~~~~g~~i~~-~g~~~~~~-----~~~~~~~~~~~~~dril~eTD 207 (259)
T 1zzm_A 162 -------------------S---------LQQAERFVQLGYKIGV-GGTITYPR-----ASKTRDVIAKLPLASLLLETD 207 (259)
T ss_dssp -------------------C---------HHHHHHHHHTTCEEEE-CGGGGCTT-----TCSHHHHHHHSCGGGEEECCC
T ss_pred -------------------C---------HHHHHHHHHCCCEEEE-Cceeeccc-----cHHHHHHHHhCCHHHEEEecC
Confidence 0 2334667778865544 22111222 233667788899999999987
Q ss_pred Cc
Q 022296 249 NP 250 (299)
Q Consensus 249 ~k 250 (299)
-|
T Consensus 208 ~P 209 (259)
T 1zzm_A 208 AP 209 (259)
T ss_dssp BT
T ss_pred CC
Confidence 65
No 195
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=76.15 E-value=11 Score=35.05 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=61.8
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccC
Q 022296 107 VEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~ 173 (299)
.+...+.|..+|-|-|+.. -+|.++.++-|+.+++.+- .+.|-+.- ..|. .
T Consensus 100 v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~--~~~~~i~a-------Rtda----~--- 163 (295)
T 1s2w_A 100 VRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT--DPDFCIVA-------RVEA----F--- 163 (295)
T ss_dssp HHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--STTCEEEE-------EECT----T---
T ss_pred HHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--cCCcEEEE-------eehH----H---
Confidence 4444579999999999862 2677888888888887652 23444420 0110 0
Q ss_pred CCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 174 APRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
+ ++ ...+++ |++++...+||||.|.+|+. -...+++.+|.+.++
T Consensus 164 --~-------a~---~g~~~a---i~Ra~ay~eAGAd~i~~e~~-------~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 164 --I-------AG---WGLDEA---LKRAEAYRNAGADAILMHSK-------KADPSDIEAFMKAWN 207 (295)
T ss_dssp --T-------TT---CCHHHH---HHHHHHHHHTTCSEEEECCC-------SSSSHHHHHHHHHHT
T ss_pred --h-------cc---ccHHHH---HHHHHHHHHcCCCEEEEcCC-------CCCHHHHHHHHHHcC
Confidence 0 00 015777 99999999999999999961 112456666776654
No 196
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=75.99 E-value=22 Score=33.64 Aligned_cols=138 Identities=15% Similarity=0.235 Sum_probs=88.4
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 105 EYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
+.+..|-+.||+.|=|.--. +|.++= .++++.++..|.-|--|+|.=-+ .+|. +.. +..+
T Consensus 89 e~i~~ai~~GFtSVMiDgS~--~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg------~Ed~-----v~~---~~~y 152 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASH--HPFDENVRITKEVVAYAHARSVSVEAELGTLGG------IEED-----VQN---TVQL 152 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTT--SCHHHHHHHHHHHHHHHHTTTCEEEEEESCC------------------------CCC
T ss_pred HHHHHHHHcCCCeEEecCCC--CCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC------CccC-----ccc---cccc
Confidence 45778889999999886554 444443 46788888999999999998311 1220 000 1111
Q ss_pred hcccCCCccchhhhhhhHHHHHHHH-HccCcEEEEec---ccccc--CCCc--ccHHHHHHHHhccCCCceEEecC-Cch
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCL-EAGADMIMIDS---DDVCK--HADS--LRADIIAKVIGRLGLEKTMFEAT-NPR 251 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dL-eAGA~~VIiEa---rgi~d--~~G~--~r~d~i~~ii~~l~~eklifEAP-~k~ 251 (299)
| +|++. +++. +-|.|.+=+== -|.|. .+-. ++.|.+++|-+.++.-=++==+. -|+
T Consensus 153 T--------dPeea-------~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~ 217 (323)
T 2isw_A 153 T--------EPQDA-------KKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPK 217 (323)
T ss_dssp C--------CHHHH-------HHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCH
T ss_pred C--------CHHHH-------HHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCH
Confidence 2 25666 5555 47888665432 28998 4434 88999999988886544444443 577
Q ss_pred hHHHHHHHhCCCccc--ccCCCCc
Q 022296 252 TSEWFIRRYGPKVNL--FVDHSQV 273 (299)
Q Consensus 252 qQ~~fI~~fG~~VNL--gI~~~eV 273 (299)
..+..|+.||-++.= ||+.+|+
T Consensus 218 ~~~~~~~~~gg~~~~~~Gvp~e~i 241 (323)
T 2isw_A 218 DVKDMINKYGGKMPDAVGVPIESI 241 (323)
T ss_dssp HHHHHHHHTTCCCTTCBCCCHHHH
T ss_pred HHHHHHHHhccccccCCCCCHHHH
Confidence 788899999999876 4766665
No 197
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=75.85 E-value=18 Score=32.85 Aligned_cols=103 Identities=19% Similarity=0.220 Sum_probs=64.0
Q ss_pred chhHHHHHHHhhcccccEEEeeCccc-ccCChhHHH-----------------HHHHHHHhC-CceecCCcHHHHHHHhC
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH-DVYVSTGDWAEHLIRNG 99 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs-~l~p~~~l~-----------------eKI~l~~~~-gV~v~~GtlfE~a~~qg 99 (299)
.+....++++..-+.+|++=+|.=-+ .+.+-..+. +-++-.+++ ++++..=++.-.++..+
T Consensus 28 ~~~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g 107 (271)
T 1ujp_A 28 SREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWG 107 (271)
T ss_dssp CHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHC
T ss_pred ChHHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhh
Confidence 44455666665544599999975332 111222232 334444444 33322215556666665
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
+++|++.|++.|+|.+=+. ++|.++..++++.++++|+...+
T Consensus 108 ---~~~f~~~~~~aG~dGviv~----Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 108 ---PERFFGLFKQAGATGVILP----DLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp ---HHHHHHHHHHHTCCEEECT----TCCGGGCHHHHHHHHHHTCEEEC
T ss_pred ---HHHHHHHHHHcCCCEEEec----CCCHHHHHHHHHHHHHcCCceEE
Confidence 7999999999999977775 45557788999999999886444
No 198
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=75.85 E-value=14 Score=35.85 Aligned_cols=50 Identities=8% Similarity=-0.018 Sum_probs=32.1
Q ss_pred HHHhCCchHHHHHHHHHHcCCCEEEecCCcc-cC--Ch--------hHHHHHHHHHHHcCCcc
Q 022296 95 LIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-EI--PE--------ETLLRYVRLVKSAGLKA 146 (299)
Q Consensus 95 a~~qg~~~~~~yl~~~k~lGF~~IEISdGti-~i--~~--------~~r~~lI~~~~~~G~~v 146 (299)
...+. ++++.++.|+++||++||+.+-.+ +. +. +.+.++-+.+++.|+++
T Consensus 76 ~~~~~--~~~~ale~~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~ 136 (438)
T 1a0c_A 76 DIAKA--RVEAAFEFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKV 136 (438)
T ss_dssp HHHHH--HHHHHHHHHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHh--hHHHHHHHHHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCce
Confidence 34444 799999999999999999953322 11 11 12344555566667764
No 199
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=75.78 E-value=12 Score=33.80 Aligned_cols=97 Identities=12% Similarity=0.093 Sum_probs=62.1
Q ss_pred HcCCCEEEecCCc-----ccCChhHHHHHHHHHHHc----CCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 112 QVGFDTIELNVGS-----LEIPEETLLRYVRLVKSA----GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 112 ~lGF~~IEISdGt-----i~i~~~~r~~lI~~~~~~----G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
+.|..+|-|-||. --+|.++.++-|+.+++. |.. |-+. .. -|. .+.. +..
T Consensus 104 ~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~----~~v~-aR------td~----~~~g--~~~---- 162 (255)
T 2qiw_A 104 EAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVD----VVIN-GR------TDA----VKLG--ADV---- 162 (255)
T ss_dssp HTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCC----CEEE-EE------ECH----HHHC--TTT----
T ss_pred HcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCC----eEEE-EE------ech----hhcc--CCc----
Confidence 4899999999986 235667788888888776 543 3231 00 010 0000 000
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC-CCceE
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG-LEKTM 244 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~-~ekli 244 (299)
..-..+++ |++++...+|||+.|.+|+- ...+++.+|.+.++ +-+++
T Consensus 163 ----~~~~~~~a---i~ra~a~~eAGAd~i~~e~~--------~~~~~~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 163 ----FEDPMVEA---IKRIKLMEQAGARSVYPVGL--------STAEQVERLVDAVSVPVNIT 210 (255)
T ss_dssp ----SSSHHHHH---HHHHHHHHHHTCSEEEECCC--------CSHHHHHHHHTTCSSCBEEE
T ss_pred ----chHHHHHH---HHHHHHHHHcCCcEEEEcCC--------CCHHHHHHHHHhCCCCEEEE
Confidence 00115677 99999999999999999973 23588999998887 33444
No 200
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=75.72 E-value=2.8 Score=39.94 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++++|+|||++|+++- |.-.. +.++..++|+.++++|++|+-.+-.
T Consensus 56 LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 56 LPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp HHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 6788999999999973 22111 3689999999999999999887755
No 201
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=75.69 E-value=16 Score=34.29 Aligned_cols=25 Identities=16% Similarity=0.182 Sum_probs=19.8
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEeccc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSDD 218 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEarg 218 (299)
.++. ++.++..-++|+++|-+=+.+
T Consensus 245 ~~~~---~~la~~L~~~Gvd~i~vs~g~ 269 (363)
T 3l5l_A 245 LEES---IELARRFKAGGLDLLSVSVGF 269 (363)
T ss_dssp HHHH---HHHHHHHHHTTCCEEEEEECC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEecCc
Confidence 5666 778888889999999886543
No 202
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=75.62 E-value=8.6 Score=36.72 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti~i~~~~r~~lI~~~~~~ 142 (299)
...++++.+.+.|+|.|+|. .|. + +.-.+.|+.+++.
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~---~-~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH---A-KYVGKTLKSLRQL 138 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS---S-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC---c-HhHHHHHHHHHHh
Confidence 45678899999999999994 553 2 2334678888774
No 203
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=75.53 E-value=12 Score=33.43 Aligned_cols=161 Identities=13% Similarity=0.161 Sum_probs=84.6
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCC---------cee--cCC--c
Q 022296 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHD---------VYV--STG--D 90 (299)
Q Consensus 25 GlT~V~DkGl~~~~g~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~g---------V~v--~~G--t 90 (299)
|...+.|=-+.= -++..+...+.+.++ +|++=+ ++....+.++.-++.+++++ |.+ +.. .
T Consensus 59 g~~iflDlK~~D--I~nTv~~~~~~~~~~gad~vTv----h~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~ 132 (239)
T 3tr2_A 59 GYRIFLDLKFYD--IPQTVAGACRAVAELGVWMMNI----HISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSD 132 (239)
T ss_dssp TCCEEEEEEECS--CHHHHHHHHHHHHHTTCSEEEE----EGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHH
T ss_pred CCCEEEEecccc--cchHHHHHHHHHHhCCCCEEEE----eccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHH
Confidence 555666655410 133444444455555 565544 34556778888888888763 211 222 3
Q ss_pred HHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc-cceeeeecCCCCCCCccccccc
Q 022296 91 WAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA-KPKFAVMFNKSDIPSDRDRAFG 168 (299)
Q Consensus 91 lfE~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v-~~E~gvK~~~sevg~~~d~~~~ 168 (299)
|-|.-+... .+.+.++-+.+++.|.+.+-+|. .....||.....+|.. -|=++.+ .+ ..+|
T Consensus 133 l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~--------~e~~~ir~~~~~~fl~vtPGIr~~--g~---~~~d---- 195 (239)
T 3tr2_A 133 LKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSA--------QEAALLRKQFDRNFLLVTPGIRLE--TD---EKGD---- 195 (239)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCH--------HHHHHHHTTCCTTSEEEECCBC-----------------
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECc--------hhHHHHHHhcCCCcEEECCCcCCC--CC---CcCc----
Confidence 433211100 02455666777888999887772 2235566655556643 3533332 11 1122
Q ss_pred ccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 169 AYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
..|+-..+..++||||++ |=+|.||.+..- ...+++|.+.
T Consensus 196 --------------------------Q~rv~t~~~~~~aGad~l-VvGr~I~~a~dp--~~a~~~i~~~ 235 (239)
T 3tr2_A 196 --------------------------QKRVMTPRAAIQAGSDYL-VIGRPITQSTDP--LKALEAIDKD 235 (239)
T ss_dssp ----------------------------CCBCHHHHHHHTCSEE-EECHHHHTSSSH--HHHHHHHHHH
T ss_pred --------------------------ccccCCHHHHHHcCCCEE-EEChHHhCCCCH--HHHHHHHHHH
Confidence 023445577889999965 557999997643 3344555443
No 204
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=75.53 E-value=2.6 Score=39.34 Aligned_cols=49 Identities=12% Similarity=0.197 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCCEEEecCCc----------------c----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 104 KEYVEDCKQVGFDTIELNVGS----------------L----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGt----------------i----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++-.++++++||++|+||==+ - .| +.++..++|+.++++|++|+-.+-.
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 445566789999999998321 1 11 3679999999999999999876633
No 205
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=75.48 E-value=1.9 Score=36.85 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+..- .. .+..++-+.+++.|+++.+
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~-~~---~~~~~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFP-YN---YSTLQIQKQLEQNHLTLAL 58 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCC-TT---SCHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCC-CC---CCHHHHHHHHHHcCCceEE
Confidence 6788899999999999999852 12 2345677888899998765
No 206
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=75.40 E-value=13 Score=36.45 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=28.9
Q ss_pred chHHHHHHHHHHcC--CCEEEecCCcccCC-------hhHHHHHHHHHHH
Q 022296 101 SAFKEYVEDCKQVG--FDTIELNVGSLEIP-------EETLLRYVRLVKS 141 (299)
Q Consensus 101 ~~~~~yl~~~k~lG--F~~IEISdGti~i~-------~~~r~~lI~~~~~ 141 (299)
+.+++|.+.++.++ +|+|||+-++=..+ .+...++++.+++
T Consensus 194 ~~~~dy~~~a~~l~~~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~ 243 (443)
T 1tv5_A 194 NIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 243 (443)
T ss_dssp CHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccCCCCcccccccCHHHHHHHHHHHHH
Confidence 36899999888887 99999997764332 2334556666654
No 207
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=75.36 E-value=14 Score=33.24 Aligned_cols=176 Identities=13% Similarity=0.063 Sum_probs=100.0
Q ss_pred CCCCceeEecCCCCCCcc-------hhHHHHHHHh----hcccccEEEeeCcccccCChhHHHHHHHHHHhCCceec--C
Q 022296 22 RRFGVTEMRSPHYTLSSS-------HNVLEDIFES----MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS--T 88 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g-------~~~l~DlLe~----ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~--~ 88 (299)
+..|++-++-+|.++. . ...++.+++. +..|=+.+..+.|-+...-.+...+-++.+.+..|.-- .
T Consensus 21 ~~~GV~~~i~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~~~vvaIGEi 99 (261)
T 3guw_A 21 KENGIKEVCSLAFFPV-KPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRCIPPDYEFVLGYLEEGEWVAFGEI 99 (261)
T ss_dssp HTTSCCEECCBCCCSS-CCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGGGCCTTTHHHHHHHTTSCCSCEEEE
T ss_pred HHCCCcEEEEeccCcc-ccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECcccccccHHHHHHHhCcCCeEEEEEe
Confidence 5679999999998653 1 1345566643 66776678888887765544446666777776443221 1
Q ss_pred C-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccc
Q 022296 89 G-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAF 167 (299)
Q Consensus 89 G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~ 167 (299)
| .+. .-.++. .|+..++.|+++|...+==+-..- ..+.-.++++.+++.|+... -+++-.. +
T Consensus 100 GLD~~-~~~Q~~--~f~~ql~lA~e~~lPv~iH~r~~~--~~~a~~~~~~il~~~~~~~~-~~vi~H~-~---------- 162 (261)
T 3guw_A 100 GLELV-TDEEIE--VLKSQLELAKRMDVPCIIHTPRGN--KLKATRKTLEILESLDFPAD-LAVIDHV-N---------- 162 (261)
T ss_dssp ECSSC-CHHHHH--HHHHHHHHHHHHTCCEEEECCSSS--TTHHHHHHHHHHHHTTCCTT-SEEEESC-C----------
T ss_pred cCCCC-hHHHHH--HHHHHHHHHHHhCCeEEEEcCCCc--ccchHHHHHHHHHHcCCCCC-CEEEEeC-C----------
Confidence 3 222 122333 699999999999998874332211 12334567777777554311 1222110 0
Q ss_pred cccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEec
Q 022296 168 GAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEA 247 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEA 247 (299)
.++ +++.++.|.+.=+-=.-|+.... + ..++++.+|+++|++|.
T Consensus 163 -----------------------~~~-------a~~~l~~G~yis~~~~pg~~t~~-~-----~~~~v~~ipldrlLlET 206 (261)
T 3guw_A 163 -----------------------FET-------LDMVLETEYWIGLTVQPGKLSAE-D-----AARIVAEHGPERFMLNS 206 (261)
T ss_dssp -----------------------TTT-------HHHHHTSSSEEEEECC--------C-----CTTGGGGCC-CCEEEEC
T ss_pred -----------------------HHH-------HHHHHhCCEEEEecCCCCcccHH-H-----HHHHHHhCCcceEEEec
Confidence 122 36778888654332011322111 1 13678899999999998
Q ss_pred CCch
Q 022296 248 TNPR 251 (299)
Q Consensus 248 P~k~ 251 (299)
.-|-
T Consensus 207 D~P~ 210 (261)
T 3guw_A 207 DAGY 210 (261)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8774
No 208
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=75.31 E-value=13 Score=36.16 Aligned_cols=84 Identities=23% Similarity=0.242 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHcC--CCEEEecCCcccC-------ChhHHHHHHHHHHHc--------CC----------cccceeeeec
Q 022296 102 AFKEYVEDCKQVG--FDTIELNVGSLEI-------PEETLLRYVRLVKSA--------GL----------KAKPKFAVMF 154 (299)
Q Consensus 102 ~~~~yl~~~k~lG--F~~IEISdGti~i-------~~~~r~~lI~~~~~~--------G~----------~v~~E~gvK~ 154 (299)
..++|++-++.+. .|+|||+-++=.. ..+...++++.+++. ++ .-+|=+.+|-
T Consensus 197 ~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi 276 (415)
T 3i65_A 197 IVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL 276 (415)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE
T ss_pred cHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe
Confidence 6788887777665 8999999766432 344555677776663 10 1233244441
Q ss_pred CCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecccc
Q 022296 155 NKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDV 219 (299)
Q Consensus 155 ~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi 219 (299)
+| +++.+++ .+-++...++|||.|++-.+..
T Consensus 277 -----------------~p--------------d~~~~~i---~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 277 -----------------AP--------------DLNQEQK---KEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp -----------------CS--------------CCCHHHH---HHHHHHHHHHTCSEEEECCCBS
T ss_pred -----------------cC--------------CCCHHHH---HHHHHHHHHcCCcEEEEeCCCc
Confidence 12 1223455 7778899999999999988643
No 209
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=75.16 E-value=3.2 Score=44.52 Aligned_cols=66 Identities=23% Similarity=0.424 Sum_probs=44.0
Q ss_pred hhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCc-HHH---------HH---HHhCCc----hHHHHHHHHH
Q 022296 49 SMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAE---------HL---IRNGPS----AFKEYVEDCK 111 (299)
Q Consensus 49 ~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-lfE---------~a---~~qg~~----~~~~yl~~~k 111 (299)
..=+|||+.= -|. + +.|+. .-|+.||+|||+|. || +|| .+ +.++.+ -.++.++.|+
T Consensus 237 ~~WqyVD~fV-YfS-h-~IPp~---~winaAHrnGV~VL-GT~i~ew~~~~~~~~~~~~~L~~d~~g~~~~A~KLveiAk 309 (937)
T 3gdb_A 237 DYWQYLDSMV-FWE-G-LVPTP---DVIDAGHRNGVPVY-GTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAK 309 (937)
T ss_dssp CCGGGCSEEE-ETT-C-SSCCH---HHHHHHHHTTCCEE-EEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHH
T ss_pred eeccceeeee-ecc-c-ccCCc---hHHHHHHhcCCeEE-EEEecCcccchhhHHHHHHHhccCccchhHHHHHHHHHHH
Confidence 4457899773 353 3 34643 78999999999885 43 223 22 223322 2789999999
Q ss_pred HcCCCE----EEec
Q 022296 112 QVGFDT----IELN 121 (299)
Q Consensus 112 ~lGF~~----IEIS 121 (299)
-+|||. +|..
T Consensus 310 yyGFDGWlINiE~~ 323 (937)
T 3gdb_A 310 YYGYDGYFINQETT 323 (937)
T ss_dssp HHTCCEEEEEEEEC
T ss_pred HcCcCceEeccccc
Confidence 999998 6664
No 210
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=75.09 E-value=5.5 Score=37.24 Aligned_cols=161 Identities=14% Similarity=0.141 Sum_probs=98.3
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhh-cccccEEEeeCcccccCC-hhHHHHHHHHHHh-CCceec---C---Cc---
Q 022296 23 RFGVTEMRSPHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMP-KPFIEEVVKRAHQ-HDVYVS---T---GD--- 90 (299)
Q Consensus 23 ~~GlT~V~DkGl~~~~g~~~l~DlLe~a-g~yID~lKfg~GTs~l~p-~~~l~eKI~l~~~-~gV~v~---~---Gt--- 90 (299)
..|+-.++||-=. .+..+.++++.+ -...|.+=+| |.-++. ++.+.+-++.+++ +++++. | |.
T Consensus 38 ~~~~~~liDPdK~---~~~~~~~~~~~~~~sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~~ 112 (286)
T 3vk5_A 38 QPGPVHIIDPFKV---PVTEAVEKAAELTRLGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGFP 112 (286)
T ss_dssp CCEEEEEECTTTS---CHHHHHHHHHHHHHTTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBSC
T ss_pred cCCceEEECCCCC---CcHHHHHHHHHHHhcCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCccc
Confidence 5688899999752 233433344444 4458999999 544440 5679999999999 787443 3 21
Q ss_pred --------------------H----HHHHHH---------------------h----------------CCchH--HHHH
Q 022296 91 --------------------W----AEHLIR---------------------N----------------GPSAF--KEYV 107 (299)
Q Consensus 91 --------------------l----fE~a~~---------------------q----------------g~~~~--~~yl 107 (299)
| +|+... - .++.. ..|-
T Consensus 113 i~~~aDa~l~psvlNs~n~~~i~g~~~~~~aa~~v~~~~~~~ge~ip~gYL~v~~g~k~V~fv~~~~~~~~e~A~~~aYa 192 (286)
T 3vk5_A 113 VVRGADALLLPALLGSGDDYFVWKSFLETLAAFPGRIPREEWPELLLTVALTFGEDPRTGDLLGTVPVSTASTEEIDRYL 192 (286)
T ss_dssp CCTTCSEEEEEEETTBSSHHHHTHHHHHHHHHCSTTSCGGGCCEEEEEEEEECSCCHHHHHHHCBCCCCCSSSHHHHHHH
T ss_pred cccCCCEEEEEEEecCCCcccccCcHHHHHHhHHHHHHHHHhCCcceEEEEEECCCCceeeeeCCCCCCCHHHHHHHHHH
Confidence 2 233321 0 12233 6899
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc---CCcccceeeeecCCCCCCCcccccccccccCCCCccchhccc
Q 022296 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA---GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLA 184 (299)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~---G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~ 184 (299)
+...++|+..|=+.-+.- ..-.++|+++++. ...+.--+|+
T Consensus 193 ~~gad~G~~lV~LD~~~~----~v~~e~V~~I~~~~~~~iPV~vGGGI-------------------------------- 236 (286)
T 3vk5_A 193 HVARAFGFHMVYLYSRNE----HVPPEVVRHFRKGLGPDQVLFVSGNV-------------------------------- 236 (286)
T ss_dssp HHHHHTTCSEEEEECSSS----CCCHHHHHHHHHHSCTTCEEEEESSC--------------------------------
T ss_pred HHHHHcCCCEEEEcCCCC----cCCHHHHHHHHHhcCCCCCEEEEeCC--------------------------------
Confidence 999999999998886552 2223677777763 1222222222
Q ss_pred CCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 185 SNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 185 ~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
.+ .+++++.+++|||.|+|=+- ++++. -.+++.+++++.+
T Consensus 237 --rs---------~Eda~~ll~aGAD~VVVGSA-av~d~---~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 237 --RS---------GRQVTEYLDSGADYVGFAGA-LEQPD---WRSALAEIAGRRP 276 (286)
T ss_dssp --CS---------HHHHHHHHHTTCSEEEESGG-GSSTT---HHHHHHHHHC---
T ss_pred --CC---------HHHHHHHHHcCCCEEEECch-hhcCC---CHHHHHHHHHhCC
Confidence 11 56669999999999999664 33332 2477888886653
No 211
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=75.01 E-value=5.4 Score=37.11 Aligned_cols=41 Identities=10% Similarity=0.274 Sum_probs=34.2
Q ss_pred HHHHHHHHHccCcEEEEecc-----ccccCCCcccHHHHHHHHhcc
Q 022296 198 SRRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar-----gi~d~~G~~r~d~i~~ii~~l 238 (299)
+..+...+.+||+-+|||-- -++|..-.+..+.++++++.+
T Consensus 224 ~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i 269 (285)
T 3sz8_A 224 LDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQM 269 (285)
T ss_dssp HHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHH
Confidence 56678899999999999983 678888889988888888654
No 212
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=74.83 E-value=15 Score=31.70 Aligned_cols=95 Identities=20% Similarity=0.214 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
...++.+.+.+.|.++|.++|..-. .....-.++++.+++. .. .| +-+. +.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~-iP-vi~~---------Gg---------------- 83 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VF-IP-LTVG---------GG---------------- 83 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CC-SC-EEEE---------SS----------------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CC-CC-EEEE---------CC----------------
Confidence 4667778888999999999976533 2334455677777763 00 11 1111 00
Q ss_pred hcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 244 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli 244 (299)
..+ .++++..+++|||.|++=..-+.+ .+.+.++.+.++.++++
T Consensus 84 -----i~~---------~~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~~~~~i~ 127 (252)
T 1ka9_F 84 -----VRS---------LEDARKLLLSGADKVSVNSAAVRR------PELIRELADHFGAQAVV 127 (252)
T ss_dssp -----CCS---------HHHHHHHHHHTCSEEEECHHHHHC------THHHHHHHHHHCGGGEE
T ss_pred -----cCC---------HHHHHHHHHcCCCEEEEChHHHhC------cHHHHHHHHHcCCCcEE
Confidence 011 455688899999999995543322 35677787777766543
No 213
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=74.62 E-value=10 Score=37.06 Aligned_cols=140 Identities=11% Similarity=0.172 Sum_probs=85.0
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCc--eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV--YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV--~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (299)
.+-+.|..+| ||.+=.||..+. |. -.+-++...+.+. .++. | .+. ..++ ++.+.+.|.+.|-
T Consensus 65 ~Ia~~L~~~G--v~~IEvG~P~as--p~--d~~~~~~i~~~~~~~~v~~--~-----~r~--~~~d-i~~A~~aG~~~V~ 128 (423)
T 3ivs_A 65 QIAKALDNFG--VDYIELTSPVAS--EQ--SRQDCEAICKLGLKCKILT--H-----IRC--HMDD-ARVAVETGVDGVD 128 (423)
T ss_dssp HHHHHHHHHT--CSEEEECCTTSC--HH--HHHHHHHHHTSCCSSEEEE--E-----EES--CHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHcC--CCEEEEeecccC--HH--HHHHHHHHHhcCCCCEEEE--e-----ecc--Chhh-HHHHHHcCCCEEE
Confidence 4445666677 788888885543 21 2233333444443 2221 1 121 2333 5777888999998
Q ss_pred ecCCcc--------cCC----hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCC
Q 022296 120 LNVGSL--------EIP----EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (299)
Q Consensus 120 ISdGti--------~i~----~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~ 187 (299)
|...+- ..+ .+.-.+.|+.+++.|+.| +|...+..
T Consensus 129 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V--~~~~eda~------------------------------- 175 (423)
T 3ivs_A 129 VVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEV--RFSSEDSF------------------------------- 175 (423)
T ss_dssp EEEEC-------------CHHHHHHHHHHHHHHTTTCEE--EEEEESGG-------------------------------
T ss_pred EEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEE--EEEEccCc-------------------------------
Confidence 864432 222 344456899999999876 44442110
Q ss_pred ccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 188 EIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 188 ~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
..+++.+ ++.+++..++||+.| .|+|..|-..+..+.++++.+
T Consensus 176 r~d~~~~---~~v~~~~~~~Ga~~i-----~l~DTvG~~~P~~v~~lv~~l 218 (423)
T 3ivs_A 176 RSDLVDL---LSLYKAVDKIGVNRV-----GIADTVGCATPRQVYDLIRTL 218 (423)
T ss_dssp GSCHHHH---HHHHHHHHHHCCSEE-----EEEETTSCCCHHHHHHHHHHH
T ss_pred CCCHHHH---HHHHHHHHHhCCCcc-----ccCCccCcCCHHHHHHHHHHH
Confidence 0126677 888899999999865 478888888888887777543
No 214
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=74.25 E-value=3.7 Score=38.53 Aligned_cols=129 Identities=14% Similarity=0.159 Sum_probs=72.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYV 171 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~ 171 (299)
+-+-++...+.|..+|-|=|+.. -+|.++-++-|+.+++.-=..-+.|-+. .. -|. +
T Consensus 105 v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~---AR----TDa-~---- 172 (307)
T 3lye_A 105 VARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLI---AR----TDA-L---- 172 (307)
T ss_dssp HHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEE---EE----ECC-H----
T ss_pred HHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEE---Ee----chh-h----
Confidence 34446666778999999999864 3577775555544443200001233331 10 110 0
Q ss_pred cCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCce---EEecC
Q 022296 172 ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT---MFEAT 248 (299)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekl---ifEAP 248 (299)
+ . ..+++. |++++...+||||.|.+|+- -..+.+.+|.+.++.-.+ |.|-+
T Consensus 173 ----~-~----------~gldeA---i~Ra~ay~eAGAD~ifi~~~--------~~~~~~~~i~~~~~~~Pv~~n~~~~g 226 (307)
T 3lye_A 173 ----Q-S----------LGYEEC---IERLRAARDEGADVGLLEGF--------RSKEQAAAAVAALAPWPLLLNSVENG 226 (307)
T ss_dssp ----H-H----------HCHHHH---HHHHHHHHHTTCSEEEECCC--------SCHHHHHHHHHHHTTSCBEEEEETTS
T ss_pred ----h-c----------cCHHHH---HHHHHHHHHCCCCEEEecCC--------CCHHHHHHHHHHccCCceeEEeecCC
Confidence 0 0 115677 99999999999999999963 135678888877652122 34532
Q ss_pred -CchhHHHHHHHhCCCcccccCCC
Q 022296 249 -NPRTSEWFIRRYGPKVNLFVDHS 271 (299)
Q Consensus 249 -~k~qQ~~fI~~fG~~VNLgI~~~ 271 (299)
.|..-..=+...|- |+-|=|.
T Consensus 227 ~~p~~t~~eL~~lGv--~~v~~~~ 248 (307)
T 3lye_A 227 HSPLITVEEAKAMGF--RIMIFSF 248 (307)
T ss_dssp SSCCCCHHHHHHHTC--SEEEEET
T ss_pred CCCCCCHHHHHHcCC--eEEEECh
Confidence 12222333566674 5543333
No 215
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=73.73 E-value=6.7 Score=39.13 Aligned_cols=52 Identities=17% Similarity=0.187 Sum_probs=41.2
Q ss_pred HHHHHHHHHccCcEEEEeccccc-------cCCCcccHHHHHHHHhccCCCceEEecCC
Q 022296 198 SRRAERCLEAGADMIMIDSDDVC-------KHADSLRADIIAKVIGRLGLEKTMFEATN 249 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~-------d~~G~~r~d~i~~ii~~l~~eklifEAP~ 249 (299)
++.+++.+++||++|+|-+.-+. +.+|..+.++++++.+++|-++++.=..-
T Consensus 350 ~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~ 408 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDP 408 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECE
T ss_pred HHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEc
Confidence 67789999999999999986433 34567778999999998887777766554
No 216
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=73.54 E-value=11 Score=33.17 Aligned_cols=108 Identities=9% Similarity=0.095 Sum_probs=64.0
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDC 110 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-------lf---E~a~~qg~~~~~~yl~~~ 110 (299)
.+++ ++.+.+. +|.+=+......-.....+++..+++.++|+.+...+ +. +....+.-+.+++.++.|
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3455 5555443 6777766543222333568888999999999765422 21 111111112689999999
Q ss_pred HHcCCCEEEecC----Cccc--C-C-hhHH-------HHHHHHHHHcCCccccee
Q 022296 111 KQVGFDTIELNV----GSLE--I-P-EETL-------LRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 111 k~lGF~~IEISd----Gti~--i-~-~~~r-------~~lI~~~~~~G~~v~~E~ 150 (299)
+++|.+.|=+.- |... . + .+.+ .++.+.+++.|.++.-|-
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 171 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEV 171 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 999999997653 5431 1 2 2222 345566677787765554
No 217
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=73.47 E-value=33 Score=31.85 Aligned_cols=23 Identities=26% Similarity=0.190 Sum_probs=18.5
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEec
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDS 216 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEa 216 (299)
+++. ++.++..-++|+|+|-+=.
T Consensus 238 ~~~~---~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 238 LEDT---LAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HHHH---HHHHHHHHHTTCCEEEEEC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEec
Confidence 5666 7778888899999998754
No 218
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=73.34 E-value=35 Score=31.50 Aligned_cols=177 Identities=11% Similarity=0.103 Sum_probs=105.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC---C-cHHHHHHHhCCchHHHHHHHHHH--
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAFKEYVEDCKQ-- 112 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a~~qg~~~~~~yl~~~k~-- 112 (299)
.+..+++.++.+|.=| +=++---..+.....-....+...+.++.+-| | .=.|-|+.-- +.+++
T Consensus 31 ~~~~~~~a~~asg~e~--vtva~rR~~~~~~~~~~~~~~~i~~~~~~~lpNTag~~ta~eAv~~a--------~lare~~ 100 (265)
T 1wv2_A 31 DLDETRRAIEASGAEI--VTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTC--------RLARELL 100 (265)
T ss_dssp SHHHHHHHHHHSCCSE--EEEEGGGCCC-------------CTTTSEEEEECTTCCSHHHHHHHH--------HHHHTTT
T ss_pred CHHHHHHHHHHhCCCe--EEEEEEeeccccCCCcchHHhhhhhcCCEECCcCCCCCCHHHHHHHH--------HHHHHHc
Confidence 6778899999888643 44443333221001124455666676775554 5 2355555432 45566
Q ss_pred cCCCEEEe---cCCcccCCh-hHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 113 VGFDTIEL---NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 113 lGF~~IEI---SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
+|-++|-+ ||--.-+|+ .+-.+..+.+++.||+|+| +-. +|
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlp-y~~----------dd------------------------ 145 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMV-YTS----------DD------------------------ 145 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEE-EEC----------SC------------------------
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEE-EeC----------CC------------------------
Confidence 56666643 354545544 3344566666677999887 222 11
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC-CchhHHHHHHHhCCCc---
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT-NPRTSEWFIRRYGPKV--- 264 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP-~k~qQ~~fI~~fG~~V--- 264 (299)
...+++-.++|++.||-+++-|=.+.|-...++|..|.+..++- ||-|+= ....+......+|.+-
T Consensus 146 ---------~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vP-VI~eGGI~TPsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 146 ---------PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVP-VLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp ---------HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSC-BEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred ---------HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCC-EEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 44568888999999999987333344556789999999865543 788876 4457888888999984
Q ss_pred ccccCC
Q 022296 265 NLFVDH 270 (299)
Q Consensus 265 NLgI~~ 270 (299)
|=+|..
T Consensus 216 gSAI~~ 221 (265)
T 1wv2_A 216 NTAIAH 221 (265)
T ss_dssp SHHHHT
T ss_pred ChHHhC
Confidence 445654
No 219
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=73.30 E-value=20 Score=30.40 Aligned_cols=140 Identities=14% Similarity=0.192 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
.+++.++.++++||+ ||+.-....++.+. ++-+..+..+ . .+.+-.+..++.. .+|.+-..+
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~--~~~~~~~~~~-~---~~~~h~~~~~~~l---------~~~~~~~r~-- 72 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEEDA--LFQSLRRRFS-G---KLSVHLPFWNLDL---------LSPDPEVRG-- 72 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCHH--HHHHHHHHCC-S---CEEEECCCTTCCT---------TCSSHHHHH--
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcHH--HHHHHHHHhC-C---CeEEecCccCCCC---------CCCCHHHHH--
Confidence 688999999999999 99965544454442 2222333332 1 2223211110000 000000000
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccC-----CCccc--HHHHHH---HHhccCCCceEEecC---
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKH-----ADSLR--ADIIAK---VIGRLGLEKTMFEAT--- 248 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~-----~G~~r--~d~i~~---ii~~l~~eklifEAP--- 248 (299)
..++.+ .+.++.+-+.||.+|.+-+-..... ...++ .+.+.+ .++..|+ ++.+|.-
T Consensus 73 -------~~~~~~---~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv-~l~lEn~~~~ 141 (254)
T 3ayv_A 73 -------LTLRRL---LFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGV-RLLLENSHEP 141 (254)
T ss_dssp -------HHHHHH---HHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTC-EEEEECSSCS
T ss_pred -------HHHHHH---HHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCC-EEEEcCCCCC
Confidence 113444 4555666678999998865321111 00010 111222 2333344 6777853
Q ss_pred CchhHHHHHHHhCCCcccccCC
Q 022296 249 NPRTSEWFIRRYGPKVNLFVDH 270 (299)
Q Consensus 249 ~k~qQ~~fI~~fG~~VNLgI~~ 270 (299)
.+.+-..+++..+|+|-+.+|.
T Consensus 142 ~~~~~~~l~~~v~~~vg~~~D~ 163 (254)
T 3ayv_A 142 HPEALRPVLEAHAGELGFCFDA 163 (254)
T ss_dssp SGGGTHHHHHHHTTSSEEEEEH
T ss_pred CHHHHHHHHHhcCcCEEEEEEc
Confidence 4567778999999666553443
No 220
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=73.27 E-value=3.7 Score=39.24 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecCCcc--------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++|+||+++|+++==+- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 38 LdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 38 LDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6788999999999863111 11 3578999999999999999887755
No 221
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=73.23 E-value=8.2 Score=35.36 Aligned_cols=41 Identities=10% Similarity=0.237 Sum_probs=33.1
Q ss_pred HHHHHHHHHccCcEEEEecc-----ccccCCCcccHHHHHHHHhcc
Q 022296 198 SRRAERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar-----gi~d~~G~~r~d~i~~ii~~l 238 (299)
+..+...+++||+=+|||.- .++|..-.+..+.++++++.+
T Consensus 205 ~~ia~aava~Ga~G~mIE~H~~pd~al~Dg~qsl~p~~l~~l~~~i 250 (267)
T 2nwr_A 205 FPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAI 250 (267)
T ss_dssp HHHHHHHHHHCCSEEEEEEESCGGGCSSCTTTCEEGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCCcccCCCccccCCCHHHHHHHHHHH
Confidence 45567788999999999994 577888888888888887654
No 222
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.17 E-value=10 Score=32.09 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHH
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKS 141 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i~-~~~r~~lI~~~~~ 141 (299)
+...+..+.+.+.|+++|++++-.-.-+ ...-.++|+.+++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~ 74 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAE 74 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHH
Confidence 4678889999999999999996443322 2234567777776
No 223
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=73.16 E-value=21 Score=32.58 Aligned_cols=21 Identities=10% Similarity=0.145 Sum_probs=17.9
Q ss_pred HHHHHHHHHccCcEEEEeccc
Q 022296 198 SRRAERCLEAGADMIMIDSDD 218 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEarg 218 (299)
.+.++...++|+|.|++-.+.
T Consensus 228 ~~~a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 228 IQVADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHHHHHTTCSEEEECCCB
T ss_pred HHHHHHHHHcCCcEEEEeCCc
Confidence 677888999999999998764
No 224
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=73.10 E-value=6.1 Score=34.08 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=60.9
Q ss_pred HHHHHHHhhccc-ccEEEeeCcc------cccCChhHHHHHHHHHHhCCc-eecC-CcHH------HHHHHhCCchHHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGS------HSLMPKPFIEEVVKRAHQHDV-YVST-GDWA------EHLIRNGPSAFKEY 106 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GT------s~l~p~~~l~eKI~l~~~~gV-~v~~-Gtlf------E~a~~qg~~~~~~y 106 (299)
.+++.++.+.++ +|.+=+ |.. ....+++.+++.-++++++|+ .++. +.++ +....+.-+.+.+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~ 93 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADD 93 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHH
Confidence 456666555432 455544 221 112335678899999999999 5443 2221 11111111257899
Q ss_pred HHHHHHcCCCEEEecCCcccCChh----HHHHHHHHHH-HcCCccccee
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEE----TLLRYVRLVK-SAGLKAKPKF 150 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~----~r~~lI~~~~-~~G~~v~~E~ 150 (299)
++.|+++|.+.|=+.-|+. +.+ ...++.+.++ +.|.++.-|-
T Consensus 94 i~~a~~lGa~~vv~h~g~~--~~~~~~~~l~~l~~~a~~~~gv~l~lEn 140 (270)
T 3aam_A 94 LEKAALLGVEYVVVHPGSG--RPERVKEGALKALRLAGVRSRPVLLVEN 140 (270)
T ss_dssp HHHHHHHTCCEEEECCCBS--CHHHHHHHHHHHHHHHTCCSSSEEEEEC
T ss_pred HHHHHHcCCCEEEECCCCC--CHHHHHHHHHHHHHhhcccCCCEEEEec
Confidence 9999999999999988876 332 2223444444 4566654444
No 225
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=73.08 E-value=17 Score=34.21 Aligned_cols=20 Identities=20% Similarity=0.228 Sum_probs=16.4
Q ss_pred HHHHHHHHHccCcEEEEeccc
Q 022296 198 SRRAERCLEAGADMIMIDSDD 218 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEarg 218 (299)
.+.+++.+++|||.|++ ++|
T Consensus 222 ~e~a~~~~~~Gad~i~v-g~G 241 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIV-GGG 241 (393)
T ss_dssp HHHHHHHHTTTCSEEEE-SCC
T ss_pred HHHHHHHHHcCCCEEEE-CCC
Confidence 34568889999999999 774
No 226
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=73.05 E-value=3.4 Score=40.96 Aligned_cols=46 Identities=15% Similarity=0.147 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++|+|||++|+++= |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 182 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 182 LDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 6788999999999982 22111 2689999999999999999887754
No 227
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=72.87 E-value=36 Score=31.69 Aligned_cols=148 Identities=11% Similarity=0.114 Sum_probs=96.9
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHH--HcCCCE
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCK--QVGFDT 117 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k--~lGF~~ 117 (299)
..+++++.....-||.+-+.+ .+..-+...+-++.++++|+.|... -.+ .+....+.|++.++ +.|.+.
T Consensus 88 ~dv~~~~~a~~~Gvd~~ri~~---~~~nle~~~~~v~~ak~~G~~v~~~~~~~-----~~~~~~~~~l~~~~~~~~G~~~ 159 (320)
T 3dxi_A 88 EDLNHLLLPIIGLVDMIRIAI---DPQNIDRAIVLAKAIKTMGFEVGFNVMYM-----SKWAEMNGFLSKLKAIDKIADL 159 (320)
T ss_dssp GGHHHHHGGGTTTCSEEEEEE---CGGGHHHHHHHHHHHHTTTCEEEEEECCT-----TTGGGSTTSGGGGGGGTTTCSE
T ss_pred hhHHHHHHhhhcCCCEEEEEe---cHHHHHHHHHHHHHHHHCCCEEEEEEEeC-----CCCCCHHHHHHHHHHhhCCCCE
Confidence 357777666668899987775 2222345667777899999876532 111 11001113444443 469999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhh
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINK 197 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
|-|.|-+--+.+++-.++|+.+++. +. ..+++-+.. | ....
T Consensus 160 i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~Hn-------~--------------------------~G~a--- 200 (320)
T 3dxi_A 160 FCMVDSFGGITPKEVKNLLKEVRKY-TH--VPVGFHGHD-------N--------------------------LQLG--- 200 (320)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHH-CC--SCEEEECBC-------T--------------------------TSCH---
T ss_pred EEECcccCCCCHHHHHHHHHHHHHh-CC--CeEEEEeCC-------C--------------------------CccH---
Confidence 9999999889999999999999985 21 235553211 1 1222
Q ss_pred HHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHhc
Q 022296 198 SRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~~ 237 (299)
+..+...++|||+.| ++- |+=...||.-++.+-..+..
T Consensus 201 ~an~laA~~aGa~~v--d~si~GlG~~~GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 201 LINSITAIDDGIDFI--DATITGMGRGAGNLKMELLLTYLNK 240 (320)
T ss_dssp HHHHHHHHHTTCSEE--EEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEE--EEeccccCCcccchhHHHHHHHHHh
Confidence 555677999999955 664 88888999998877766653
No 228
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=72.78 E-value=3.5 Score=39.27 Aligned_cols=134 Identities=9% Similarity=0.070 Sum_probs=78.0
Q ss_pred HHHHHHHHHcCCCEEEecC-------Cc-----ccC-----ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccc
Q 022296 104 KEYVEDCKQVGFDTIELNV-------GS-----LEI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRA 166 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd-------Gt-----i~i-----~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~ 166 (299)
.+-++++++||+++|.++- |. ..+ +.++..++|+.++++|++|+-.+-.. .. + +
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N--H~--s--~--- 109 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN--YR--G--E--- 109 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT--TT--S--S---
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCC--cC--C--C---
Confidence 3346788999999999983 11 111 25899999999999999999887662 11 1 1
Q ss_pred ccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc-cccCCCcccHHHHHHHHhccCCCc-eE
Q 022296 167 FGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD-VCKHADSLRADIIAKVIGRLGLEK-TM 244 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg-i~d~~G~~r~d~i~~ii~~l~~ek-li 244 (299)
.+|=.. .+ +--.+.+ ++.++-.|+.|+|=.=+++=+ +.+.. .. -..+.++++.+..+. +|
T Consensus 110 -------~~wF~~-----q~-~~Vr~~~---~~~~~~Wl~~gvDGfRlD~v~~~~~~~-~~-~~~~~~~~~~~~~~~~~i 171 (424)
T 2dh2_A 110 -------NSWFST-----QV-DTVATKV---KDALEFWLQAGVDGFQVRDIENLKDAS-SF-LAEWQNITKGFSEDRLLI 171 (424)
T ss_dssp -------STTCSS-----CH-HHHHHHH---HHHHHHHHHHTCCEEEECCGGGSTTHH-HH-HHHHHHHHHHHCTTCEEE
T ss_pred -------cccccc-----cC-HHHHHHH---HHHHHHHHHcCCCEEEEeccccCCccH-HH-HHHHHHHHHHhCCCcEEE
Confidence 123100 00 0002445 677788899999988887643 22210 01 112344556666664 46
Q ss_pred EecCCchhHHHHHHHhCCCcc
Q 022296 245 FEATNPRTSEWFIRRYGPKVN 265 (299)
Q Consensus 245 fEAP~k~qQ~~fI~~fG~~VN 265 (299)
.|...... ...++-++..-+
T Consensus 172 ~~e~~~~~-~~~~~~~~~~~~ 191 (424)
T 2dh2_A 172 AGTNSSDL-QQILSLLESNKD 191 (424)
T ss_dssp EECSCCCH-HHHHHHTTTCTT
T ss_pred EEEecCCH-HHHHHHhccccc
Confidence 68764322 223455565444
No 229
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=72.72 E-value=6.9 Score=35.69 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
.++-+.+++.|.+.|=.| |.+ .+.||.....+|. |-|=++.+ .+ ..+|
T Consensus 147 ~~~A~~a~~~G~dGvV~s------~~e--~~~ir~~~~~~f~~vtPGIr~~--g~---~~gD------------------ 195 (259)
T 3tfx_A 147 LSLAKMAKHSGADGVICS------PLE--VKKLHENIGDDFLYVTPGIRPA--GN---AKDD------------------ 195 (259)
T ss_dssp HHHHHHHHHTTCCEEECC------GGG--HHHHHHHHCSSSEEEECCCCCC-----------------------------
T ss_pred HHHHHHHHHhCCCEEEEC------HHH--HHHHHhhcCCccEEEcCCcCCC--CC---CcCC------------------
Confidence 356667788898877665 322 4677777766665 34533321 11 1112
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
..||-.++..++||||++++ ||.||.++.- ...+++|.+.+
T Consensus 196 ------------Q~Rv~T~~~a~~aGad~iVv-Gr~I~~a~dp--~~a~~~i~~~~ 236 (259)
T 3tfx_A 196 ------------QSRVATPKMAKEWGSSAIVV-GRPITLASDP--KAAYEAIKKEF 236 (259)
T ss_dssp -----------------CHHHHHHTTCSEEEE-CHHHHTSSSH--HHHHHHHHHHH
T ss_pred ------------ccccCCHHHHHHcCCCEEEE-ChHHhCCCCH--HHHHHHHHHHH
Confidence 13577778899999997666 7999998743 34455555433
No 230
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=72.54 E-value=4.2 Score=37.99 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti-~--i~----~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||+.||+++..+ . .+ .+...++.+.+++.|+++..
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~ 87 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPM 87 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEE
Confidence 688899999999999999983221 1 12 45677788889999998654
No 231
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=72.41 E-value=2.7 Score=37.29 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=64.9
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
.+....++++.+|+|+|++|++..-..-+..+. |+..+++|..+..- =+ .-.|+.+..|++.+.++|.|+
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~----v~~lr~~~~~v~lD~kl-----~Dip~t~~~~~~~~~~~Gad~ 85 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMELYYQEGPAI----VAFLKEQGHAVFLDLKL-----HDIPNTVKQAMKGLARVGADL 85 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHH----HHHHHHTTCEEEEEEEE-----CSCHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhcccccEEEeCHHHHHHhCHHH----HHHHHHCCCeEEEEeec-----ccchHHHHHHHHHHHhcCCCE
Confidence 455777888999999999999987765455444 44456665544432 12 122445677999999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH---cCCc
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKS---AGLK 145 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~---~G~~ 145 (299)
|-|+-- ...+...++++.+++ .|.+
T Consensus 86 vTvH~~---~g~~~l~~~~~~~~~~~~~G~~ 113 (246)
T 2yyu_A 86 VNVHAA---GGRRMMEAAIEGLDAGTPSGRM 113 (246)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHHSCSSSC
T ss_pred EEEECC---CCHHHHHHHHHHHHhhcccCCc
Confidence 999853 344545578888887 5644
No 232
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=72.36 E-value=8.3 Score=33.14 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=28.3
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCCh-hHHHHHHHHHHHc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPE-ETLLRYVRLVKSA 142 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~-~~r~~lI~~~~~~ 142 (299)
.++++.+.+.|.+.|.+......-|. +.-.++|+.+++.
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~ 130 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEK 130 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHh
Confidence 56788899999999998766543331 2345788888885
No 233
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=72.26 E-value=7.6 Score=33.60 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=60.6
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecC-----CcHHH-----------HHHHhCCchHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-----GDWAE-----------HLIRNGPSAFK 104 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-----GtlfE-----------~a~~qg~~~~~ 104 (299)
.+++.++.+.+. .|.+=+.+- ++. .+++.-++++++|+.++. +.|.. ..-.. +.++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~ 96 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFP----YDF-DADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFR--DNVD 96 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCC----TTS-CHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHH--HHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCC----ccC-CHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHH--HHHH
Confidence 455555555544 677777541 222 378888899999997653 23321 00111 1588
Q ss_pred HHHHHHHHcCCCEEEecCCccc--CCh-hHH-------HHHHHHHHHcCCcccce
Q 022296 105 EYVEDCKQVGFDTIELNVGSLE--IPE-ETL-------LRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~--i~~-~~r-------~~lI~~~~~~G~~v~~E 149 (299)
+.++.|+++|.+.|-+..| .. .+. +.+ .++.+.+++.|+++.-|
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999777 32 221 222 23445566667765444
No 234
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=72.12 E-value=37 Score=31.86 Aligned_cols=24 Identities=8% Similarity=-0.154 Sum_probs=19.2
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
.++. ++.++..-++|+++|-+=++
T Consensus 249 ~~~~---~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 249 ILTY---TAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp HHHH---HHHHHHHHHTTCSEEEEECC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEeCC
Confidence 5566 77788888999999988665
No 235
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=72.09 E-value=37 Score=33.02 Aligned_cols=82 Identities=21% Similarity=0.276 Sum_probs=49.4
Q ss_pred HHHHHHHhhcccccEEEe--eCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 42 VLEDIFESMGQFVDGLKF--SGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKf--g~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
..+.+++ +| +|++=+ +.|. + +...+.|+.++++ ++++..|+- . . .+..+.+.+.|.|+
T Consensus 259 ~a~~~~~-aG--~d~v~i~~~~G~----~-~~~~~~i~~i~~~~~~~pvi~~~v------~---t-~~~a~~l~~aGad~ 320 (514)
T 1jcn_A 259 RLDLLTQ-AG--VDVIVLDSSQGN----S-VYQIAMVHYIKQKYPHLQVIGGNV------V---T-AAQAKNLIDAGVDG 320 (514)
T ss_dssp HHHHHHH-TT--CSEEEECCSCCC----S-HHHHHHHHHHHHHCTTCEEEEEEE------C---S-HHHHHHHHHHTCSE
T ss_pred HHHHHHH-cC--CCEEEeeccCCc----c-hhHHHHHHHHHHhCCCCceEeccc------c---h-HHHHHHHHHcCCCE
Confidence 3344444 44 677776 4332 3 2455777777777 888876532 1 1 23356788899999
Q ss_pred EEecC--Ccc---------cCChhHHHHHHHHHHH
Q 022296 118 IELNV--GSL---------EIPEETLLRYVRLVKS 141 (299)
Q Consensus 118 IEISd--Gti---------~i~~~~r~~lI~~~~~ 141 (299)
|-++. |.+ ..|...-..+++.+++
T Consensus 321 I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~ 355 (514)
T 1jcn_A 321 LRVGMGCGSICITQEVMACGRPQGTAVYKVAEYAR 355 (514)
T ss_dssp EEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHG
T ss_pred EEECCCCCcccccccccCCCccchhHHHHHHHHHh
Confidence 99976 332 3445555566666665
No 236
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=71.95 E-value=3.6 Score=37.28 Aligned_cols=69 Identities=20% Similarity=0.255 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhCCc-eec--CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcc
Q 022296 71 FIEEVVKRAHQHDV-YVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (299)
Q Consensus 71 ~l~eKI~l~~~~gV-~v~--~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v 146 (299)
.+++-|+..++.|- .|. |+..- .+....++.++..++.|+++|||+.+... .+....+.+.+++.|+.+
T Consensus 172 ~~~~~i~~i~~~Gg~~VlAHP~r~~-----~~~~~~~~~l~~l~~~g~~giEv~~~~~~--~~~~~~~~~~a~~~gl~~ 243 (292)
T 2yb1_A 172 SLEDAVGWIVGAGGMAVIAHPGRYD-----MGRTLIERLILDFQAAGGQGIEVASGSHS--LDDMHKFALHADRHGLYA 243 (292)
T ss_dssp CHHHHHHHHHHTTCEEEECCGGGSS-----CCHHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHcCCEEEEECcCccc-----cchhhHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHHHHHHHHcCCce
Confidence 47889999998774 333 33210 01002567777788899999999999875 556678889999998875
No 237
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Probab=71.87 E-value=4.5 Score=41.67 Aligned_cols=86 Identities=17% Similarity=0.317 Sum_probs=54.6
Q ss_pred cccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC--------C-c---HHHHHHHhCCc----hHHHHHHHHHHcC
Q 022296 51 GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--------G-D---WAEHLIRNGPS----AFKEYVEDCKQVG 114 (299)
Q Consensus 51 g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~--------G-t---lfE~a~~qg~~----~~~~yl~~~k~lG 114 (299)
=+|||..=. | +-|.|. ..-|+.||+|||+|.. | + |++-++.++.+ -+++.++.|+.+|
T Consensus 88 W~yvD~fvy-f--h~l~P~---~~widaAHrnGV~VlGT~~fe~~~~~~~~~~~~~lL~~~~~~~~~~a~kLv~la~~yG 161 (653)
T 2w91_A 88 WQYLDSMVF-W--EGLVPT---PDVIDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYG 161 (653)
T ss_dssp GGGCSEEEE-T--TCSSCC---HHHHHHHHHTTCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHT
T ss_pred ccccceeec-c--cccCCC---cHHHHHHHHCCCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhC
Confidence 368886532 5 455553 3679999999998872 1 1 55666644422 3799999999999
Q ss_pred CCEEEecCCcc-cCChh---HHHHHHHHHHHc
Q 022296 115 FDTIELNVGSL-EIPEE---TLLRYVRLVKSA 142 (299)
Q Consensus 115 F~~IEISdGti-~i~~~---~r~~lI~~~~~~ 142 (299)
||.+=|+-=+- .++.+ ....+++.+++.
T Consensus 162 FDGw~IN~E~~~~~~~~~~~~l~~F~~~L~~~ 193 (653)
T 2w91_A 162 YDGYFINQETTGDLVKPLGEKMRQFMLYSKEY 193 (653)
T ss_dssp CCEEEEEEEECSTTTGGGHHHHHHHHHHHHHH
T ss_pred CCceEEeecccCCCCHHHHHHHHHHHHHHHHH
Confidence 99876654431 13333 334555555553
No 238
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=71.60 E-value=17 Score=33.31 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=82.8
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------------hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 022296 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------------EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (299)
Q Consensus 97 ~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~-------------~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~ 163 (299)
.+|-..+.+-+++|.+.||+.+|||..++.+- .++..++-+.+++.|+++..--.. .-..++
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py---~iNL~S-- 131 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQ---YVNPGS-- 131 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCT---TCCTTC--
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCch---hhcCCC--
Confidence 44434688899999999999999988876553 256667777888889864321110 001111
Q ss_pred cccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCc--EEEEeccccccCCCcccHHHHHHHHhccCC-
Q 022296 164 DRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGAD--MIMIDSDDVCKHADSLRADIIAKVIGRLGL- 240 (299)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~--~VIiEargi~d~~G~~r~d~i~~ii~~l~~- 240 (299)
|.+... ..+++.+ .+.++++-+.|+. .|++=.-+.|. . +++.++.+++.+..
T Consensus 132 ---------~~~e~r---------e~Si~~l---~~~l~~a~~lG~~~a~~v~HpG~~~~---~-~e~~~~r~~e~l~~~ 186 (301)
T 2j6v_A 132 ---------PDPEVV---------ERSLAEL---RYSARLLSLLGAEDGVLVLHLGGAYG---E-KGKALRRFVENLRGE 186 (301)
T ss_dssp ---------SCHHHH---------HHHHHHH---HHHHHHHHHTTCTTCEEEEECCCCTT---C-HHHHHHHHHHHHTTC
T ss_pred ---------CCHHHH---------HHHHHHH---HHHHHHHHHcCCCCCEEEECCCcCCC---C-HHHHHHHHHHHHhHH
Confidence 110001 1236677 7778888888943 66666555442 2 56666666655431
Q ss_pred ----CceEEecCC----chhHHHHHHHhC
Q 022296 241 ----EKTMFEATN----PRTSEWFIRRYG 261 (299)
Q Consensus 241 ----eklifEAP~----k~qQ~~fI~~fG 261 (299)
++|..|.-. .++-..+++..+
T Consensus 187 ~~a~~~l~lEn~~~~~t~~el~~l~~~~~ 215 (301)
T 2j6v_A 187 EEVLRYLALENDERLWNVEEVLKAAEALG 215 (301)
T ss_dssp HHHHHHEEEECCSSSCCHHHHHHHHHHHT
T ss_pred HhhcceEEEEeCCCCCCHHHHHHHHhcCC
Confidence 378888753 455567777775
No 239
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=71.37 E-value=2.1 Score=37.83 Aligned_cols=92 Identities=7% Similarity=0.030 Sum_probs=63.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
.+....++++.+|+|+|++|++..-..-+..+.++ ..+++|..+..- =+. -.|+.+..|++.+.++|.|+
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~----~l~~~~~~v~lD~kl~-----Dip~t~~~~~~~~~~~Gad~ 84 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVK----QLKERNCELFLDLKLH-----DIPTTVNKAMKRLASLGVDL 84 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHH----HHHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHH----HHHHCCCcEEEEeccc-----cchHHHHHHHHHHHhcCCCE
Confidence 45577788888999999999998776555555444 445665554432 121 22345667999999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHc
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
|-|+-- ...+...++++.+++.
T Consensus 85 vtvH~~---~g~~~l~~~~~~~~~~ 106 (239)
T 1dbt_A 85 VNVHAA---GGKKMMQAALEGLEEG 106 (239)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHHH
T ss_pred EEEeCc---CCHHHHHHHHHHHHhh
Confidence 999853 2344445788888876
No 240
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=71.31 E-value=6.6 Score=33.52 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=65.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecC-C--cHH----HHHHHhCCchHHHHHHHHHHc
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWA----EHLIRNGPSAFKEYVEDCKQV 113 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~-G--tlf----E~a~~qg~~~~~~yl~~~k~l 113 (299)
.+++.|+.+.+. .|.+=+.... +. ...+++.-++++++|+.+.. . ..+ +....+.-+.+++.++.|+.+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~--~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQ--VA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHH--HH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecccc--cc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 455666665554 5666664421 22 34588888999999997763 2 111 111111112689999999999
Q ss_pred CCCEEEecCCccc---CCh--------hHHHHHHHHHHHcCCcccce
Q 022296 114 GFDTIELNVGSLE---IPE--------ETLLRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 114 GF~~IEISdGti~---i~~--------~~r~~lI~~~~~~G~~v~~E 149 (299)
|.+.|-+..|... .+. +...++.+.+++.|+++.-|
T Consensus 96 G~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 96 GADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp TCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 9999999887654 222 22345556677778875555
No 241
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=71.28 E-value=34 Score=30.09 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=62.8
Q ss_pred HHHHHHHhhcccccEEEeeCccccc------CChhHHHHHHHHHHhCCceecC-CcHH-H--------------------
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSL------MPKPFIEEVVKRAHQHDVYVST-GDWA-E-------------------- 93 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l------~p~~~l~eKI~l~~~~gV~v~~-Gtlf-E-------------------- 93 (299)
..=+.+..+| +|.+=+......+ ..++.+++..++++++|+.++. ++.+ .
T Consensus 19 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l 96 (340)
T 2zds_A 19 EVCRLARDFG--YDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARI 96 (340)
T ss_dssp HHHHHHHHHT--CSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHH
T ss_pred HHHHHHHHcC--CCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccc
Confidence 3333444444 6666665321111 1234588889999999998753 3221 1
Q ss_pred -------HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC------C-------hhHH-------HHHHHHHHHcCCcc
Q 022296 94 -------HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI------P-------EETL-------LRYVRLVKSAGLKA 146 (299)
Q Consensus 94 -------~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i------~-------~~~r-------~~lI~~~~~~G~~v 146 (299)
....+.-+.+++.++.|+++|.+.|-+..|...- + .+.+ .++.+.+++.|+++
T Consensus 97 ~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 176 (340)
T 2zds_A 97 WGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRF 176 (340)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 0011111258889999999999999998776531 1 2222 23445677778876
Q ss_pred ccee
Q 022296 147 KPKF 150 (299)
Q Consensus 147 ~~E~ 150 (299)
.-|-
T Consensus 177 ~lEn 180 (340)
T 2zds_A 177 AHEV 180 (340)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6555
No 242
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=71.27 E-value=34 Score=33.83 Aligned_cols=122 Identities=11% Similarity=0.166 Sum_probs=61.6
Q ss_pred cCChhHHHHHHHHHHh---CCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCC-EEEecCCcc-------cCChhHHH
Q 022296 66 LMPKPFIEEVVKRAHQ---HDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD-TIELNVGSL-------EIPEETLL 133 (299)
Q Consensus 66 l~p~~~l~eKI~l~~~---~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~-~IEISdGti-------~i~~~~r~ 133 (299)
+|+...+++.++.+++ ++| -+++ .++.-++.-++.+++.+.. .||+|.+.+ .+.+++-.
T Consensus 2 ~M~l~~mkelL~~ak~g~~~gi~av~~---------~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~ 72 (450)
T 3txv_A 2 VMQENHLIDIARWSERPGPRGIPSICS---------AHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFT 72 (450)
T ss_dssp -------------------CCEEEECC---------CCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHH
T ss_pred CccccCHHHHHHHHHhCCCcEEEEeCc---------CCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHH
Confidence 3555568888888876 334 2332 2222344455667888766 468886544 45567777
Q ss_pred HHHHHH-HHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEE
Q 022296 134 RYVRLV-KSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMI 212 (299)
Q Consensus 134 ~lI~~~-~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~V 212 (299)
.+++.+ ++.|+.|-| +-.. .| =..|.+|...-. -+.|.+-.+.++++++||=..|
T Consensus 73 ~~V~~~A~~~~vPv~p-V~Lh---------lD-----Hg~~~~w~~~~~---------~~am~~a~e~i~~aI~AGFtSV 128 (450)
T 3txv_A 73 RFVGAIADRIEFPREK-ILLG---------GD-----HLGPNPWKHLPA---------DEAMAKAEAMITAYAKAGFTKL 128 (450)
T ss_dssp HHHHHHHHHTTCCGGG-EEEE---------EE-----EESSGGGTTSCH---------HHHHHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHcCcCccc-EEEE---------CC-----CCCCcccccccH---------HHHHHHHHHHHHHHHHcCCCEE
Confidence 777655 445555422 2221 11 012455643311 2445455788999999999999
Q ss_pred EEeccccc
Q 022296 213 MIDSDDVC 220 (299)
Q Consensus 213 IiEargi~ 220 (299)
|+++.-.+
T Consensus 129 MiD~S~~p 136 (450)
T 3txv_A 129 HLDTSMGC 136 (450)
T ss_dssp EECCCBCC
T ss_pred EECCCCCc
Confidence 99998543
No 243
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=71.24 E-value=4.6 Score=38.21 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecCC---------------ccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVG---------------SLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdG---------------ti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+++++++||++|.+|-= .-. + +.++..++|+.+.++|++|.-.+-.
T Consensus 36 l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 36 LQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp HHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 57889999999999842 221 1 2488999999999999999888754
No 244
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=71.02 E-value=4.9 Score=38.26 Aligned_cols=51 Identities=12% Similarity=0.194 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHcCCCEEEecC------------Cc----ccC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 102 AFKEYVEDCKQVGFDTIELNV------------GS----LEI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd------------Gt----i~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-.++.++++++|||++|+++= |. -.+ +.++..++|+.++++|++|+-.+-.
T Consensus 16 i~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 344556788999999999972 22 223 2578999999999999999877744
No 245
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=70.99 E-value=21 Score=32.62 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=18.2
Q ss_pred HHHHHHHHHccCcEEEEeccccccCC
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d~~ 223 (299)
.+.+++..++||+-|+| ++.|++..
T Consensus 232 ~edv~~l~~~Ga~gvLV-G~almr~~ 256 (272)
T 3tsm_A 232 HEDCLRLEKSGIGTFLI-GESLMRQH 256 (272)
T ss_dssp HHHHHHHHTTTCCEEEE-CHHHHTSS
T ss_pred HHHHHHHHHcCCCEEEE-cHHHcCCc
Confidence 34458889999999988 44466654
No 246
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=70.91 E-value=6.1 Score=37.22 Aligned_cols=96 Identities=19% Similarity=0.212 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccC
Q 022296 105 EYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~ 173 (299)
+-.+..-+.|..+|-|-|+.. -+|.++.++-|+.+++..-. +.|-+. . ..|. +
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~--~~~~I~--A-----Rtda-~------ 183 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD--SDFFLV--A-----RTDA-R------ 183 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT--SCCEEE--E-----EECT-H------
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc--CCcEEE--E-----eeHH-h------
Confidence 334444568999999999862 36777777777777665321 334442 0 0110 0
Q ss_pred CCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCC
Q 022296 174 APRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGL 240 (299)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ 240 (299)
.. -.++++ |++++...+||||.|.+|+- ...+++.+|.+.++.
T Consensus 184 ----a~---------~gl~~a---i~Ra~Ay~eAGAd~i~~e~~--------~~~e~~~~i~~~l~~ 226 (318)
T 1zlp_A 184 ----AP---------HGLEEG---IRRANLYKEAGADATFVEAP--------ANVDELKEVSAKTKG 226 (318)
T ss_dssp ----HH---------HHHHHH---HHHHHHHHHTTCSEEEECCC--------CSHHHHHHHHHHSCS
T ss_pred ----hh---------cCHHHH---HHHHHHHHHcCCCEEEEcCC--------CCHHHHHHHHHhcCC
Confidence 00 014677 99999999999999999973 135788888888873
No 247
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=70.89 E-value=4.3 Score=38.97 Aligned_cols=46 Identities=9% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++++|||++|.++- |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 62 LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 62 LDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp HHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6788999999999973 211 11 2578999999999999999887754
No 248
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=70.89 E-value=11 Score=33.38 Aligned_cols=135 Identities=13% Similarity=0.179 Sum_probs=79.3
Q ss_pred Cc-eeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCC-hhHHHHHHHHHHhCC--cee--cCC--cHHHHHH
Q 022296 25 GV-TEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP-KPFIEEVVKRAHQHD--VYV--STG--DWAEHLI 96 (299)
Q Consensus 25 Gl-T~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p-~~~l~eKI~l~~~~g--V~v--~~G--tlfE~a~ 96 (299)
|. ..+.|=-+. --++..+...+.+.++ |++=. ++... .+.++.-++.++++| |.+ ++. ++.+
T Consensus 52 ~~~~VflDlK~~--DI~nTv~~~~~~~~~~-d~vTV----h~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~--- 121 (222)
T 4dbe_A 52 DVEEIIVDFKLA--DIGYIMKSIVERLSFA-NSFIA----HSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWST--- 121 (222)
T ss_dssp CCSEEEEEEEEC--SCHHHHHHHHTTCTTC-SEEEE----ESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCC---
T ss_pred CCCeEEEEeeec--chHHHHHHHHHHHHhC-CEEEE----EcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHH---
Confidence 55 566665441 1245566666777777 77655 34555 667888888888775 332 221 2322
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-ccceeeeecCCCCCCCcccccccccccCCC
Q 022296 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKSDIPSDRDRAFGAYVARAP 175 (299)
Q Consensus 97 ~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~gvK~~~sevg~~~d~~~~~~~~~~~ 175 (299)
....++.+.+++.|.+.+-+|. .+.+..+.||..... |. +-| |+. +.++
T Consensus 122 ----~~~~~~a~~a~~~g~~GvV~sa-----t~p~e~~~ir~~~~~-~~~vtP--GI~-------~~g~----------- 171 (222)
T 4dbe_A 122 ----LFADYIKNVIREISPKGIVVGG-----TKLDHITQYRRDFEK-MTIVSP--GMG-------SQGG----------- 171 (222)
T ss_dssp ----TTHHHHHHHHHHHCCSEEEECT-----TCHHHHHHHHHHCTT-CEEEEC--CBS-------TTSB-----------
T ss_pred ----HHHHHHHHHHHHhCCCEEEECC-----CCHHHHHHHHHhCCC-CEEEcC--Ccc-------cCcc-----------
Confidence 1236788899999998887665 112334556655443 32 333 331 1111
Q ss_pred CccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCC
Q 022296 176 RSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHAD 224 (299)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G 224 (299)
++ +..+++|||++|| ||+||.+..
T Consensus 172 --------------tp----------~~a~~~Gad~iVV-GR~I~~A~d 195 (222)
T 4dbe_A 172 --------------SY----------GDAVCAGADYEII-GRSIYNAGN 195 (222)
T ss_dssp --------------CT----------THHHHHTCSEEEE-CHHHHTSSS
T ss_pred --------------CH----------HHHHHcCCCEEEE-CHHhcCCCC
Confidence 02 2346799999888 999999874
No 249
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=70.86 E-value=4.5 Score=38.06 Aligned_cols=46 Identities=20% Similarity=0.337 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecC--------C-----cccCC------hhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------G-----SLEIP------EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------G-----ti~i~------~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++++++|||++|+++= | ...+. .++..++|+.++++|++|+-.+-.
T Consensus 27 ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 27 VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp HHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5678999999999872 2 12333 578999999999999999887754
No 250
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=70.76 E-value=4.2 Score=41.42 Aligned_cols=52 Identities=19% Similarity=0.405 Sum_probs=40.7
Q ss_pred CchHHHHHHHHHHcCCCEEEec---------CCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 022296 100 PSAFKEYVEDCKQVGFDTIELN---------VGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---------dGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (299)
++..++-++.+|++||++|.++ .|..+.+- ++..++|+.++++||+|+-+.+
T Consensus 36 ~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 36 KEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 4578888999999999999997 45554443 2335679999999999998876
No 251
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=70.76 E-value=24 Score=32.69 Aligned_cols=17 Identities=6% Similarity=-0.058 Sum_probs=8.9
Q ss_pred HHHHHHHHHhCCc---eecC
Q 022296 72 IEEVVKRAHQHDV---YVST 88 (299)
Q Consensus 72 l~eKI~l~~~~gV---~v~~ 88 (299)
++.-|+++++-|+ ++||
T Consensus 170 vetAiaml~dmG~~SvKffP 189 (275)
T 3m6y_A 170 IKTAIALVRDMGGNSLKYFP 189 (275)
T ss_dssp HHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHcCCCeeeEee
Confidence 4555555555554 4555
No 252
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=70.73 E-value=13 Score=35.10 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=26.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
..+.++.+.+.|++.|+|+-+. . .++...++|+.+++.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~-g-~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH-G-HSTRIIELIKKIKTK 191 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-C-SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCC-C-ChHHHHHHHHHHHHH
Confidence 4566778888999999994322 1 235566788888875
No 253
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=70.61 E-value=7 Score=38.17 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=38.2
Q ss_pred HHHHHHHcCCCEEEecCCc--------------------ccCC-------hhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNVGS--------------------LEIP-------EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGt--------------------i~i~-------~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
=++++|+|||++|++|==+ -.+. .++..++|+.++++|++|+-.+-.
T Consensus 42 ~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 42 QAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp HHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 3678899999999998322 2344 789999999999999999888755
No 254
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=70.61 E-value=3.2 Score=42.32 Aligned_cols=23 Identities=13% Similarity=0.154 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHcCCcccceeee
Q 022296 130 ETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 130 ~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++..++|+.+.++|++|+-.+-.
T Consensus 379 ~efk~LV~~aH~~GIkVIlDvV~ 401 (884)
T 4aio_A 379 IEYRQMVQALNRIGLRVVMDVVY 401 (884)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCceeeeecc
Confidence 45889999999999999887755
No 255
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=70.34 E-value=12 Score=32.92 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=61.0
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccc-----cCChhHHHHHHHHHHhCCc-eecC-CcHH--------HHHHHhCCchHHH
Q 022296 42 VLEDIFESMGQF-VDGLKFSGGSHS-----LMPKPFIEEVVKRAHQHDV-YVST-GDWA--------EHLIRNGPSAFKE 105 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~-----l~p~~~l~eKI~l~~~~gV-~v~~-Gtlf--------E~a~~qg~~~~~~ 105 (299)
.+++.++.+.++ +|.+=+...... ..+++.+++.-++++++|+ .++. +.+. +....+.-+.+++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~ 98 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRA 98 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHHHHH
Confidence 466666666543 666666322211 1224568888899999999 4443 2221 2222222236888
Q ss_pred HHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHHc
Q 022296 106 YVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKSA 142 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~--i~~~~r~~lI~~~~~~ 142 (299)
.++.|+++|.+.|=+--|+.. -+.+.+.++++.+++.
T Consensus 99 ~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l 137 (303)
T 3aal_A 99 EIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEV 137 (303)
T ss_dssp HHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999988777542 2244555666666653
No 256
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=70.22 E-value=6 Score=37.41 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=35.9
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++++++|||++|+++- |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 29 LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 29 VSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp HHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788999999999873 211 11 3689999999999999999876644
No 257
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=70.07 E-value=5.4 Score=34.44 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=63.9
Q ss_pred HHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCc-------HH---HHHHHhCCchHHHHHHHHH
Q 022296 43 LEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDCK 111 (299)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gt-------lf---E~a~~qg~~~~~~yl~~~k 111 (299)
+++.++.+.+. +|.+=+......-.+...+++..++++++|+.+...+ +. +....+.-+.+++.++.|+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 98 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCH 98 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555555443 7777777655433344668899999999999665421 11 1111111126889999999
Q ss_pred HcCCCEEEecC----Cc--c--c-CChhHHH-------HHHHHHHHcCCccccee
Q 022296 112 QVGFDTIELNV----GS--L--E-IPEETLL-------RYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 112 ~lGF~~IEISd----Gt--i--~-i~~~~r~-------~lI~~~~~~G~~v~~E~ 150 (299)
++|.+.|=++- |. . . -..+.+. ++.+.+++.|.++.-|-
T Consensus 99 ~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 153 (290)
T 2qul_A 99 LLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV 153 (290)
T ss_dssp HHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC
T ss_pred HcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999997642 43 1 1 1233333 34455666677655553
No 258
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=69.67 E-value=7.4 Score=34.78 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHH
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~ 141 (299)
...+..+.|.+-|+++||| ++....-.+.|+.+++
T Consensus 26 ~a~~~a~al~~gGi~~iEv-----t~~t~~a~~~I~~l~~ 60 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEV-----TLRTEAGLAAISAIKK 60 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEE-----ETTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE-----eCCCccHHHHHHHHHH
Confidence 4455567788889999999 3444566789999888
No 259
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=69.61 E-value=6.2 Score=34.40 Aligned_cols=95 Identities=13% Similarity=0.194 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC-ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEI-PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i-~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
...++.+.+.+.|+++|-++|-+-.- ....-.++|+++++. +++..-. .+.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-------~~ipvi~-----~Gg---------------- 87 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-------TTLPIIA-----SGG---------------- 87 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-------CCSCEEE-----ESC----------------
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-------CCCCEEE-----eCC----------------
Confidence 46678888899999999998754321 112224678877773 2221000 000
Q ss_pred hcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 244 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli 244 (299)
..+ .+.++..+++||+.|++=.. ... +.+.+.++.+.+|.++++
T Consensus 88 -----i~~---------~~~~~~~l~~Gad~V~ig~~-~l~-----dp~~~~~~~~~~g~~~iv 131 (247)
T 3tdn_A 88 -----AGK---------MEHFLEAFLRGADKVSINTA-AVE-----NPSLITQIAQTFGSQAVV 131 (247)
T ss_dssp -----CCS---------HHHHHHHHHTTCSEECCSHH-HHH-----CTHHHHHHHHHHC-----
T ss_pred -----CCC---------HHHHHHHHHcCCCeeehhhH-Hhh-----ChHHHHHHHHHhCCCcEE
Confidence 011 45558889999999998443 221 134577777777766665
No 260
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=69.51 E-value=22 Score=30.54 Aligned_cols=94 Identities=19% Similarity=0.260 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~-~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
...++.+.+.+.|.++|.+++..-.-. ...-.++|+.+++. .. .| +-+. +.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~-ip-vi~~---------gg---------------- 82 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-ID-IP-FTVG---------GG---------------- 82 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CC-SC-EEEE---------SS----------------
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CC-CC-EEEe---------CC----------------
Confidence 355566778889999999997653322 22335667777662 00 11 1110 00
Q ss_pred hcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCce
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT 243 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekl 243 (299)
..+ .++++..+++|||.|++=..-+.+ .+.+.++++.++.+++
T Consensus 83 -----I~~---------~~~~~~~~~~Gad~V~lg~~~l~~------p~~~~~~~~~~g~~~i 125 (253)
T 1thf_D 83 -----IHD---------FETASELILRGADKVSINTAAVEN------PSLITQIAQTFGSQAV 125 (253)
T ss_dssp -----CCS---------HHHHHHHHHTTCSEEEESHHHHHC------THHHHHHHHHHCGGGE
T ss_pred -----CCC---------HHHHHHHHHcCCCEEEEChHHHhC------hHHHHHHHHHcCCCcE
Confidence 001 345688899999999985542322 3567777777776654
No 261
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=69.16 E-value=3.7 Score=38.49 Aligned_cols=47 Identities=23% Similarity=0.212 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-----CC--hhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE-----IP--EETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-----i~--~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+.+.++.++++||++||+....+. ++ .+...++-+.+++.|+++..
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPM 87 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEE
Confidence 3788899999999999999863221 11 34566777888888998653
No 262
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=68.89 E-value=15 Score=35.78 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
...+..+.+.+.|++.|+|.-+.-. .+...++|+.+++.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~--~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGN--SVYQIAMVHYIKQK 293 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCC--SHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCc--chhHHHHHHHHHHh
Confidence 3567788899999999999433211 13345788888885
No 263
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=68.87 E-value=7.1 Score=37.38 Aligned_cols=48 Identities=8% Similarity=0.134 Sum_probs=36.3
Q ss_pred HHHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 104 KEYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
.+-++++++|||++|+++==+- .+ +.++..++|+.+.++|++|+-.+-
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3446788999999999982111 02 368899999999999999876663
No 264
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=68.76 E-value=29 Score=33.23 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=97.1
Q ss_pred chhHHHHHHHhhccccc--EEEeeCcccccC---Ch-h-------------HHHHHHHHHHhCCceecC----C-c----
Q 022296 39 SHNVLEDIFESMGQFVD--GLKFSGGSHSLM---PK-P-------------FIEEVVKRAHQHDVYVST----G-D---- 90 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID--~lKfg~GTs~l~---p~-~-------------~l~eKI~l~~~~gV~v~~----G-t---- 90 (299)
+...++.+|+.|-+.=- +|-++-|+...+ +- . ...--..++++++|+|.. | +
T Consensus 38 n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~~~ 117 (358)
T 1dos_A 38 GTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLP 117 (358)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCccHH
Confidence 45566666666543211 466666654333 11 1 133444577889999985 5 3
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHcCCcccceeeeecCCCCCCCccccc
Q 022296 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRA 166 (299)
Q Consensus 91 lfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r----~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~ 166 (299)
|++.++.- .++|+..+-+.||+.|=|.--. +|.++= .+++++++..|.-|--|+|.=-+ .+|.
T Consensus 118 ~i~~~i~a----~~~~~~~~~~~gFtSVMiDgS~--~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG------~EDg- 184 (358)
T 1dos_A 118 WIDGLLDA----GEKHFAATGKPLFSSHMIDLSE--ESLQENIEICSKYLERMSKIGMTLEIELGCTGG------EEDG- 184 (358)
T ss_dssp HHHHHHHH----HHHHHHHHSSCSCSEEEECCTT--SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCC------CCCC-
T ss_pred HHHHHHHH----HHHHHHhcccCCCceEeecCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccC------cCCC-
Confidence 36666554 3677777888889999886554 444432 46788888999999999998311 1220
Q ss_pred ccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHc--cCc--EEEEec----ccccc-CCCcccHHHHHHHHh
Q 022296 167 FGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEA--GAD--MIMIDS----DDVCK-HADSLRADIIAKVIG 236 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeA--GA~--~VIiEa----rgi~d-~~G~~r~d~i~~ii~ 236 (299)
.......-+.-+| +|++. +++.+. |.| .-+.=| -|+|. .+-.++.+++.+|-+
T Consensus 185 --v~~~~~~~~~~yT--------~Peea-------~~fv~~ttgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~ 246 (358)
T 1dos_A 185 --VDNSHMDASALYT--------QPEDV-------DYAYTELSKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQE 246 (358)
T ss_dssp --CSCCCCCCCCCSC--------CHHHH-------HHHHHHHHTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHH
T ss_pred --ccccccccccccC--------CHHHH-------HHHHHHhcCCChhceEEEecccccCccCCCCCCcCHHHHHHHHH
Confidence 0000000001111 25555 777776 677 122222 28995 566788888887754
No 265
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=68.45 E-value=7.4 Score=37.84 Aligned_cols=47 Identities=11% Similarity=0.246 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 105 EYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+=++++++|||++|+++==+- + + +.++..++|+.++++|++|+-.+-
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346788999999999982111 1 2 268999999999999999876653
No 266
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=68.44 E-value=6.5 Score=35.89 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=40.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceec
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~ 87 (299)
......++++..++|++++|.|.--..-+..+.+++..++++.+|..|.
T Consensus 42 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~Vf 90 (260)
T 3eww_A 42 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 90 (260)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEE
Confidence 5678899999999999999999777777777888888888777776555
No 267
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=68.43 E-value=7.3 Score=37.24 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 105 EYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+=++++++|||++|+++==+- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 27 ~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 27 DDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 346788999999999972111 02 3689999999999999998766533
No 268
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=68.39 E-value=4.7 Score=39.96 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++|+|||++|+++= |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 179 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~ 242 (585)
T 1wzl_A 179 LPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVF 242 (585)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 6788999999999982 21111 3689999999999999999877643
No 269
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=68.35 E-value=7.3 Score=37.29 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 105 EYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+=|+++++|||++|+++==+- + + +.++..++|+.++++|++|+-.+-
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346788999999999982111 0 2 368999999999999999876653
No 270
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=68.21 E-value=27 Score=31.99 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
++.-+..++++|-+.|-.=.=--.=..++...+-+.+.++||-.-|-=|+
T Consensus 147 vetAiaml~dmG~~SvKffPm~Gl~~l~E~~avAka~a~~g~~lEPTGGI------------------------------ 196 (249)
T 3m0z_A 147 LETAIALLKDMGGSSIKYFPMGGLKHRAEFEAVAKACAAHDFWLEPTGGI------------------------------ 196 (249)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTTTHHHHHHHHHHHHHTTCEEEEBSSC------------------------------
T ss_pred HHHHHHHHHHcCCCeeeEeecCCcccHHHHHHHHHHHHHcCceECCCCCc------------------------------
Confidence 66677777777777666532111223455555556666666632232222
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-ccc-cCCCcccHHHHHHHHhc
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-DVC-KHADSLRADIIAKVIGR 237 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-gi~-d~~G~~r~d~i~~ii~~ 237 (299)
+++-+ -+-.+-||+||+.+||=-== .|. ...|+-|.+.+.+++..
T Consensus 197 -------dl~N~---~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~ 243 (249)
T 3m0z_A 197 -------DLENY---SEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEM 243 (249)
T ss_dssp -------CTTTH---HHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHH
T ss_pred -------cHhhH---HHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHH
Confidence 12222 33356678888887773321 244 34588888888777753
No 271
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=68.08 E-value=6.9 Score=35.37 Aligned_cols=78 Identities=19% Similarity=0.188 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHcCCC---EEEecCCccc--------CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccc
Q 022296 102 AFKEYVEDCKQVGFD---TIELNVGSLE--------IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~---~IEISdGti~--------i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~ 169 (299)
.+.+..+.+.+.||| +|||+-++=. -+.+...++|+.+++. + +| +.+|-.
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~---~P-v~vK~~-------------- 168 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYG---LP-FGVKMP-------------- 168 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHC---SC-EEEEEC--------------
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcC---CC-EEEEEC--------------
Confidence 455556667778999 9999765321 1456667888888874 2 12 555521
Q ss_pred cccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEecc
Q 022296 170 YVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSD 217 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEar 217 (299)
|. ++.+++ .+.++...++| |+.|++-.+
T Consensus 169 ---~~--------------~~~~~~---~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 169 ---PY--------------FDIAHF---DTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp ---CC--------------CCHHHH---HHHHHHHHTCTTEEEEEECCC
T ss_pred ---CC--------------CCHHHH---HHHHHHHHhcCCceEEEEeCC
Confidence 10 113444 56678889999 999997665
No 272
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=67.78 E-value=44 Score=32.78 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=67.1
Q ss_pred HHHHHHHhhcccccEEEeeCcc-cccCChhHHHHHHHHHHhCCceecC--Cc--HHHH----HHHhCC------------
Q 022296 42 VLEDIFESMGQFVDGLKFSGGS-HSLMPKPFIEEVVKRAHQHDVYVST--GD--WAEH----LIRNGP------------ 100 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GT-s~l~p~~~l~eKI~l~~~~gV~v~~--Gt--lfE~----a~~qg~------------ 100 (299)
.++++++..| ++.+|+...- ....+.+.|++.++.++++|+.+.. .. ..+. +...|.
T Consensus 152 ~~~~l~~~~G--~~~iki~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~ 229 (559)
T 2fty_A 152 QLQAAYNDYG--VSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPS 229 (559)
T ss_dssp HHHHHHHHHC--CCEEEEESSSTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCH
T ss_pred HHHHHHHHCC--CCEEEEEecCCCCcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCH
Confidence 3444553445 7889976532 1456778899999999999987764 32 2221 233331
Q ss_pred ----chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 101 ----SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 101 ----~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+.+.+..++.+|.. +-|. -++.++=.++|+++++.|..|..|+..
T Consensus 230 ~~E~~av~~~i~la~~~g~~-vhi~----H~s~~~~~~~i~~ak~~G~~Vt~e~~p 280 (559)
T 2fty_A 230 IVEGEATNRAITLATTMDTP-ILFV----HVSSPQAAEVIKQAQTKGLKVYAETCP 280 (559)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-EEEC----SCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred HHHHHHHHHHHHHHHHhCCC-EEEE----cCCCHHHHHHHHHHHHcCCceEEeecC
Confidence 2466677788888876 3342 334455579999999999988666644
No 273
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=67.66 E-value=25 Score=31.24 Aligned_cols=102 Identities=9% Similarity=0.098 Sum_probs=63.6
Q ss_pred HHHHHHhhccc-ccEEEeeCccc-ccCChhHHHHHHHHHHhCCceecC-C-cHH--------------------HHHHHh
Q 022296 43 LEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-G-DWA--------------------EHLIRN 98 (299)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~l~eKI~l~~~~gV~v~~-G-tlf--------------------E~a~~q 98 (299)
+++.|+.+.+. .|.+=+.+... ..++. .+++.-++++++|+.++. . .++ +.. .+
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~-~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 108 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGV-PMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKI-ME 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTE-EHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCC-CHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHH-HH
Confidence 56666666555 67777654221 13333 377778899999997753 1 120 211 22
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHcCCc--ccce
Q 022296 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLK--AKPK 149 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~-------~lI~~~~~~G~~--v~~E 149 (299)
.+++.++.|+++|.+.|=+..+.-.-+.+.+. ++.+.+++.|++ +.-|
T Consensus 109 ---~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 109 ---YWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp ---HHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred ---HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 68999999999999999885332223444443 455677788888 6544
No 274
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=67.56 E-value=5.3 Score=39.64 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd--------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 178 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 178 LDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp HHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred hHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6788999999999973 21111 3689999999999999999876643
No 275
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=67.52 E-value=22 Score=31.74 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=13.2
Q ss_pred HHHHHHHHccCcEEEEec
Q 022296 199 RRAERCLEAGADMIMIDS 216 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEa 216 (299)
++++. +.+|||-|||=+
T Consensus 219 e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 219 EHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHH-HHTTSSEEEECH
T ss_pred HHHHH-HHcCCCEEEECH
Confidence 34466 899999999954
No 276
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=67.35 E-value=23 Score=32.34 Aligned_cols=108 Identities=11% Similarity=0.120 Sum_probs=70.3
Q ss_pred hHHHHHHHhhcccccEEE-ee---CcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 41 NVLEDIFESMGQFVDGLK-FS---GGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lK-fg---~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
.+.++-++.-++=||++= +| -|-.-.. .+.+++-.+.|+++|+.+ =--+|.++...++.+..-.+.|.+.|-|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v-~~ei~~v~~a~~~~g~~l--KvIlEt~~L~d~e~i~~a~~ia~eaGAD 165 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVG-FDLVKACKEACAAANVLL--KVIIETGELKDEALIRKASEISIKAGAD 165 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHH-HHHHHHHHHHHHHTTCEE--EEECCHHHHCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHH-HHHHHHHHHHhcccCCeE--EEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 477888999999999874 44 2222222 225777778888776531 1135777777644577889999999999
Q ss_pred EEEecCCcccC--ChhHHHHHHHHHHHcCCcccceeeee
Q 022296 117 TIELNVGSLEI--PEETLLRYVRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 117 ~IEISdGti~i--~~~~r~~lI~~~~~~G~~v~~E~gvK 153 (299)
.|--|.|+..- +.++=.-+-+.+++.| +-+.+++|
T Consensus 166 fVKTSTGf~~~gAt~e~v~lm~~~I~~~~--~g~~v~VK 202 (260)
T 1p1x_A 166 FIKTSTGKVAVNATPESARIMMEVIRDMG--VEKTVGFK 202 (260)
T ss_dssp EEECCCSCSSCCCCHHHHHHHHHHHHHHT--CTTTCEEE
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHhc--CCCCceEE
Confidence 99999999754 5554322223334433 34457777
No 277
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=67.23 E-value=6.5 Score=37.50 Aligned_cols=47 Identities=11% Similarity=0.168 Sum_probs=36.4
Q ss_pred HHHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-|+++|+|||++|+++==+- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 48 ~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 48 KLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp THHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 36788999999999872111 11 2688999999999999999887755
No 278
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=67.22 E-value=27 Score=32.84 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=82.6
Q ss_pred EEeeCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHc--------CCCEEEecCCc
Q 022296 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQV--------GFDTIELNVGS 124 (299)
Q Consensus 57 lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~l--------GF~~IEISdGt 124 (299)
|-++-|+...++...+.--..++++++|+|.. |.=+ +.+..|-++ ||+.|=+.--.
T Consensus 56 lq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~------------e~i~~ai~~~~~~~~~~GFtSVMiDgS~ 123 (306)
T 3pm6_A 56 ILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDP------------EIIKRAADLSRSETHEPGFDSIMVDMSH 123 (306)
T ss_dssp EEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCH------------HHHHHHHHTC------CCCSEEEECCTT
T ss_pred EEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCH------------HHHHHHHHhhhhccCCCCCCEEEEeCCC
Confidence 33444433333334444445566666666654 3212 234555555 99999996554
Q ss_pred ccCChh--HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHH
Q 022296 125 LEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAE 202 (299)
Q Consensus 125 i~i~~~--~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 202 (299)
.++.+- .=.++++.++..|.-|--|+|.=-+ .+|. . ......+..+| +|++. +
T Consensus 124 ~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG------~Edg---v-~~~~~~~~~yT--------~Peea-------~ 178 (306)
T 3pm6_A 124 FSKEENLRLTRELVAYCNARGIATEAEPGRIEG------GEDG---V-QDTVDLEGVLT--------TPEES-------E 178 (306)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCC------CBTT---B-CCCTTCCCBCC--------CHHHH-------H
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecc------ccCC---c-cccccccccCC--------CHHHH-------H
Confidence 444332 2247788889999999999987311 1221 0 00000011112 25555 6
Q ss_pred HHHHccCcEEEEe---ccccccC-CCcccHHHHHHHHhccC
Q 022296 203 RCLEAGADMIMID---SDDVCKH-ADSLRADIIAKVIGRLG 239 (299)
Q Consensus 203 ~dLeAGA~~VIiE---argi~d~-~G~~r~d~i~~ii~~l~ 239 (299)
++.+.|.|.+=+= +-|.|.. +-.++.+.+++|-+.++
T Consensus 179 ~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~ 219 (306)
T 3pm6_A 179 EFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVG 219 (306)
T ss_dssp HHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhC
Confidence 6778999854331 2389964 56899999999988774
No 279
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=67.11 E-value=26 Score=31.92 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=65.3
Q ss_pred hhHHHHHHHHHHhC--Cce-ec---C---CcHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHHHH
Q 022296 69 KPFIEEVVKRAHQH--DVY-VS---T---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYVRL 138 (299)
Q Consensus 69 ~~~l~eKI~l~~~~--gV~-v~---~---GtlfE~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~ 138 (299)
.+.+.+.+...+++ +++ ++ + ||-++. +.+..-++++.+-++| +++|.|- +..+++...++++.
T Consensus 82 ~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~----~~~~~~~ll~~~l~~g~~dyIDvE---l~~~~~~~~~l~~~ 154 (276)
T 3o1n_A 82 AESVLEAAGAIREIITDKPLLFTFRSAKEGGEQAL----TTGQYIDLNRAAVDSGLVDMIDLE---LFTGDDEVKATVGY 154 (276)
T ss_dssp HHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCC----CHHHHHHHHHHHHHHTCCSEEEEE---GGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCC----CHHHHHHHHHHHHhcCCCCEEEEE---CcCCHHHHHHHHHH
Confidence 35688888887775 443 22 1 553321 1113445666677789 8998875 45677888899999
Q ss_pred HHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 139 VKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 139 ~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
+++.|-+++--..- ...++ +.+++ ++..++..+.|||.|=+
T Consensus 155 a~~~~~kvI~S~Hd---f~~tP-----------------------------~~~el---~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 155 AHQHNVAVIMSNHD---FHKTP-----------------------------AAEEI---VQRLRKMQELGADIPKI 195 (276)
T ss_dssp HHHTTCEEEEEEEE---SSCCC-----------------------------CHHHH---HHHHHHHHHTTCSEEEE
T ss_pred HHhCCCEEEEEeec---CCCCc-----------------------------CHHHH---HHHHHHHHHcCCCEEEE
Confidence 99988776543332 21111 13567 67777788899986644
No 280
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=66.94 E-value=42 Score=36.53 Aligned_cols=163 Identities=13% Similarity=0.157 Sum_probs=104.3
Q ss_pred CCCCCCcchhHHHHHHHhh-cccccEEEeeCcccccCChhHHHHHHHHHHhCCceec-----CCcHH--HHHHHhCCchH
Q 022296 32 PHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWA--EHLIRNGPSAF 103 (299)
Q Consensus 32 kGl~~~~g~~~l~DlLe~a-g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~-----~Gtlf--E~a~~qg~~~~ 103 (299)
.||... ..+-.+..++.| ..-||.+-+...++-+.. .+.-++.+++.|-.+. +|+.+ |.+-..+++.+
T Consensus 619 vgy~~~-pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~---~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~ 694 (1150)
T 3hbl_A 619 VGYKNY-PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQ---MKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYY 694 (1150)
T ss_dssp TCSSCC-CHHHHHHHHHHHHHTTCCEEEEECTTCCGGG---GHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHH
T ss_pred cccccC-CchhHHHHHHHHHhCCcCEEEEEeeCCHHHH---HHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHH
Confidence 345444 344444444443 445999999887766544 6667777888885432 24321 11111222235
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
-+..+.+.+.|.+.|-|.|-.--+.+.+-.++|+.++++ +. -.++..+.. |
T Consensus 695 ~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~Hn-------t------------------- 745 (1150)
T 3hbl_A 695 VKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSA-VD--LPIHLHTHD-------T------------------- 745 (1150)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH-CC--SCEEEEECB-------T-------------------
T ss_pred HHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHh-cC--CeEEEEeCC-------C-------------------
Confidence 666777788999999999999999999999999999986 32 234543211 1
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEEecc--ccccCCCcccHHHHHHHHhccC
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--DVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--gi~d~~G~~r~d~i~~ii~~l~ 239 (299)
.... +-.+...++|||+. |++- |+=...|+...+.+-..+...+
T Consensus 746 -------~G~a---~An~laA~~aGa~~--vD~ai~GlG~~~gn~~lE~lv~~L~~~g 791 (1150)
T 3hbl_A 746 -------SGNG---LLTYKQAIDAGVDI--IDTAVASMSGLTSQPSANSLYYALNGFP 791 (1150)
T ss_dssp -------TSCH---HHHHHHHHHTTCSE--EEEBCGGGCSBTSCCBHHHHHHHTTTSS
T ss_pred -------CcHH---HHHHHHHHHhCCCE--EEEeccccCCCCCCccHHHHHHHHHhcC
Confidence 1223 55668899999996 5664 7877778877666655555444
No 281
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=66.66 E-value=9.9 Score=34.11 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=55.6
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCC
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASN 186 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~ 186 (299)
+.+++..|-|+|=+..-.++ ++-.++++.+++.|+.++-|+.-
T Consensus 121 i~~a~~~GAD~VlL~~~~l~---~~l~~l~~~a~~lGl~~lvev~~---------------------------------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVALLG---ELTGAYLEEARRLGLEALVEVHT---------------------------------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHHHG---GGHHHHHHHHHHHTCEEEEEECS----------------------------------
T ss_pred HHHHHHcCCCEEEECccchH---HHHHHHHHHHHHCCCeEEEEECC----------------------------------
Confidence 56799999999999766555 67778999999988777633321
Q ss_pred CccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 187 PEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 187 ~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
.+++++.+++||++|=+..+.+.+- .+.-+...++...+
T Consensus 164 -----------~~E~~~a~~~gad~IGvn~~~l~~~--~~dl~~~~~L~~~i 202 (254)
T 1vc4_A 164 -----------ERELEIALEAGAEVLGINNRDLATL--HINLETAPRLGRLA 202 (254)
T ss_dssp -----------HHHHHHHHHHTCSEEEEESBCTTTC--CBCTTHHHHHHHHH
T ss_pred -----------HHHHHHHHHcCCCEEEEccccCcCC--CCCHHHHHHHHHhC
Confidence 1223678899999999998875432 22333444444443
No 282
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=66.59 E-value=6.3 Score=37.73 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=36.9
Q ss_pred HHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHcCCcccceeeee
Q 022296 107 VEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gvK 153 (299)
++++|+|||++|+++==+- .+ +.++..++|+.++++|++|+-.+-..
T Consensus 49 LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 49 LDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp HHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred HHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 6788999999999872111 11 36899999999999999999887553
No 283
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=66.25 E-value=4.6 Score=37.67 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-C--C----hhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE-I--P----EETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i--~----~~~r~~lI~~~~~~G~~v~~ 148 (299)
.+++.++.++++||++||+....+. . . .++..++-+.+++.|+++..
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~ 87 (386)
T 1muw_A 34 DPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPM 87 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCE
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEE
Confidence 3788899999999999999853221 0 1 35667788888999998654
No 284
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=66.21 E-value=13 Score=35.25 Aligned_cols=94 Identities=12% Similarity=0.076 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC--------Chh----HHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEI--------PEE----TLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGA 169 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i--------~~~----~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~ 169 (299)
-++.-++.++..|.+.|-|...+-++ +.+ .-.+.|+.+++.|..| +|+-.+.
T Consensus 88 di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~~~~ed~-------------- 151 (370)
T 3rmj_A 88 DIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV--EFSCEDA-------------- 151 (370)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCE--EEEEETG--------------
T ss_pred HHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEE--EEecCCC--------------
Confidence 46666666777999998887655433 322 2334677888888764 4444211
Q ss_pred cccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHh
Q 022296 170 YVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIG 236 (299)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~ 236 (299)
. ..+++.+ ++.++...++||+.|- |+|..|-..+..+.++++
T Consensus 152 --------~---------r~~~~~~---~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~ 193 (370)
T 3rmj_A 152 --------L---------RSEIDFL---AEICGAVIEAGATTIN-----IPDTVGYSIPYKTEEFFR 193 (370)
T ss_dssp --------G---------GSCHHHH---HHHHHHHHHHTCCEEE-----EECSSSCCCHHHHHHHHH
T ss_pred --------C---------ccCHHHH---HHHHHHHHHcCCCEEE-----ecCccCCcCHHHHHHHHH
Confidence 0 1226778 8999999999998664 788888888777766654
No 285
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=66.16 E-value=12 Score=32.93 Aligned_cols=99 Identities=15% Similarity=0.134 Sum_probs=59.8
Q ss_pred HHHHHHHhhcc---cccE-EEeeCcccccCChhHHHHHHHHHHhCCc----eec-CC-cHHHHHHHhCCc----------
Q 022296 42 VLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVS-TG-DWAEHLIRNGPS---------- 101 (299)
Q Consensus 42 ~l~DlLe~ag~---yID~-lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~-~G-tlfE~a~~qg~~---------- 101 (299)
.|+++|+.+.+ ++.+ +|-.... ...++.++..+++.++++. .++ +- ..+..+-...|+
T Consensus 87 tL~evl~~~~~~~~~l~iEiK~~~~~--~~~~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~ 164 (250)
T 3ks6_A 87 TLEELCALYVDSHVNFRCEIKPGVDG--LPYEGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSV 164 (250)
T ss_dssp EHHHHHHHHTTCSCEEEEEECCCTTS--CCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHH
T ss_pred CHHHHHHHHhccCcEEEEEeCCCccc--CcchHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEeccc
Confidence 78888887742 1211 4543211 1123567777888888864 222 22 344444444442
Q ss_pred ----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 ----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
.++++.+.++.+|++.+-.+...++ .++|+.+++.|++|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~G~~V~~ 209 (250)
T 3ks6_A 165 LQQLGPGAVIETAIAHSIHEIGVHIDTAD------AGLMAQVQAAGLDFGC 209 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEGGGCC------HHHHHHHHHTTCEEEE
T ss_pred ccccchhHHHHHHHhcCCCEEecchhhCC------HHHHHHHHHCCCEEEE
Confidence 2456778899999998877654332 4789999999888654
No 286
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=66.08 E-value=7 Score=33.40 Aligned_cols=51 Identities=10% Similarity=0.081 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHcCCCEEEe---cCCccc-------------C--C-hhHHHHHHHHHHHcCCcccceeee
Q 022296 102 AFKEYVEDCKQVGFDTIEL---NVGSLE-------------I--P-EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI---SdGti~-------------i--~-~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+++.++.+|++||++|-| +++... . . -+..-+++..|.+.|++|+-++.-
T Consensus 43 ~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 43 RIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7889999999999999998 222110 0 1 122356899999999999988754
No 287
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=66.06 E-value=4.3 Score=32.77 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.5
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
++.+.+.+++|.++|..+|=++.|+.+ .++.+.++++|++++
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~~~------~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGTEN------EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTCCC------HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCh------HHHHHHHHHcCCeEE
Confidence 347889999999999999999999852 379999999999976
No 288
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=65.86 E-value=10 Score=34.24 Aligned_cols=137 Identities=14% Similarity=0.140 Sum_probs=75.5
Q ss_pred CChhHHHHHHHHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 022296 67 MPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (299)
++.+.+.+.++.+.++|+ .++ .||- .-.+ + .+.+.+.++.+++.|+ .|.+|.|.+ +. +.++++++.|+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe-~p~~-~-~~~~~~li~~i~~~~~-~i~~s~g~l--~~----e~l~~L~~ag~ 153 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE-DPYX-M-PDVISDIVKEIKKMGV-AVTLSLGEW--PR----EYYEKWKEAGA 153 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC-CGGG-T-THHHHHHHHHHHTTSC-EEEEECCCC--CH----HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC-CCCc-c-HHHHHHHHHHHHhcCc-eEEEecCCC--CH----HHHHHHHHhCC
Confidence 466778888888888887 333 3432 0111 1 2378889999998865 566888765 22 45677777887
Q ss_pred cccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCC
Q 022296 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHAD 224 (299)
Q Consensus 145 ~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G 224 (299)
...+ ++.+. . .+..+ ..+.|. -+.+.+ ++.++..-++|-. +..--++.-.|
T Consensus 154 ~~v~-i~let-----~--~~~~~-~~i~~~--------------~~~~~~---~~~i~~~~~~Gi~---v~~~~i~G~p~ 204 (348)
T 3iix_A 154 DRYL-LRHET-----A--NPVLH-RKLRPD--------------TSFENR---LNCLLTLKELGYE---TGAGSMVGLPG 204 (348)
T ss_dssp CEEE-CCCBC-----S--CHHHH-HHHSTT--------------SCHHHH---HHHHHHHHHTTCE---EEECBEESCTT
T ss_pred CEEe-eeeee-----C--CHHHH-HHhCCC--------------cCHHHH---HHHHHHHHHhCCe---eccceEEeCCC
Confidence 6544 55531 1 11100 011111 125666 8999999999963 44443443323
Q ss_pred cccHHHHH--HHHhccCCCc
Q 022296 225 SLRADIIA--KVIGRLGLEK 242 (299)
Q Consensus 225 ~~r~d~i~--~ii~~l~~ek 242 (299)
+=.+++.+ ..+..++++.
T Consensus 205 et~e~~~~~~~~l~~l~~~~ 224 (348)
T 3iix_A 205 QTIDDLVDDLLFLKEHDFDM 224 (348)
T ss_dssp CCHHHHHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCE
Confidence 32333322 2334556554
No 289
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=65.84 E-value=39 Score=36.86 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchh
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~ 181 (299)
..+++++.+.+.|.+.|-|.+..-+ .+.....|+.+++.|..| ++.+.... ++ .| |+. .
T Consensus 646 ~~~~~i~~a~~~g~d~irif~sl~~--~~~~~~~i~~~~~~g~~v--~~~i~~~~-~~---~d--------~~r--~--- 704 (1165)
T 2qf7_A 646 VVKYFVRQAAKGGIDLFRVFDCLNW--VENMRVSMDAIAEENKLC--EAAICYTG-DI---LN--------SAR--P--- 704 (1165)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTCC--GGGGHHHHHHHHHTTCEE--EEEEECCS-CT---TC--------TTS--G---
T ss_pred hHHHHHHHHHhcCcCEEEEEeeHHH--HHHHHHHHHHHHhccceE--EEEEEEec-cc---cC--------CCC--C---
Confidence 3678999999999999999765433 345667899999999665 44443211 01 12 110 0
Q ss_pred cccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 182 FLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 182 ~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
..+++.+ ++.+++..++||+.|- |+|..|-.....+.++++.+
T Consensus 705 ------~~~~~~~---~~~~~~~~~~Ga~~i~-----l~DT~G~~~P~~~~~lv~~l 747 (1165)
T 2qf7_A 705 ------KYDLKYY---TNLAVELEKAGAHIIA-----VKDMAGLLKPAAAKVLFKAL 747 (1165)
T ss_dssp ------GGCHHHH---HHHHHHHHHTTCSEEE-----EEETTCCCCHHHHHHHHHHH
T ss_pred ------CCCHHHH---HHHHHHHHHcCCCEEE-----EeCccCCcCHHHHHHHHHHH
Confidence 0236778 8999999999999663 78888988888887777543
No 290
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=65.82 E-value=46 Score=28.16 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=63.6
Q ss_pred HHHHHHhhccc-ccEEEeeCccc--ccCChhHHHHHHHHHHhCCceecC-Cc--HH----HHHHHhCCchHHHHHHHHHH
Q 022296 43 LEDIFESMGQF-VDGLKFSGGSH--SLMPKPFIEEVVKRAHQHDVYVST-GD--WA----EHLIRNGPSAFKEYVEDCKQ 112 (299)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs--~l~p~~~l~eKI~l~~~~gV~v~~-Gt--lf----E~a~~qg~~~~~~yl~~~k~ 112 (299)
+++.++.+.++ .|.+=+..... ...+...+++.-++++++|+.++. .+ .+ +. ..+ .+++.++.|++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~-~~~---~~~~~i~~a~~ 96 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEE-VVK---KTEGLLRDAQG 96 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHH-HHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHH-HHH---HHHHHHHHHHH
Confidence 34444443322 56666553221 222345688888999999998743 21 11 22 222 68999999999
Q ss_pred cCCCEEEecCCcccCC------hhHHHHHHHHHHHcCCccccee
Q 022296 113 VGFDTIELNVGSLEIP------EETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 113 lGF~~IEISdGti~i~------~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
+|.+.|-+..|...-. .+...++.+.+++.|+++.-|-
T Consensus 97 lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~ 140 (272)
T 2q02_A 97 VGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEP 140 (272)
T ss_dssp HTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECC
T ss_pred hCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 9999999876653210 3344466677778888755554
No 291
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=65.43 E-value=4.8 Score=41.16 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEecC------------------Ccc-----------cCC-------hhHHHHHHHHHHHcCCcccc
Q 022296 105 EYVEDCKQVGFDTIELNV------------------GSL-----------EIP-------EETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd------------------Gti-----------~i~-------~~~r~~lI~~~~~~G~~v~~ 148 (299)
+-+.++|+|||++|+++= |.- ... .++..++|+.+.++|++|+-
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 457888999999999971 111 121 48999999999999999987
Q ss_pred eeee
Q 022296 149 KFAV 152 (299)
Q Consensus 149 E~gv 152 (299)
.+-.
T Consensus 335 DvV~ 338 (718)
T 2e8y_A 335 DVVF 338 (718)
T ss_dssp EECT
T ss_pred EEec
Confidence 7755
No 292
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=65.04 E-value=8 Score=36.39 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=40.6
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceec
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~ 87 (299)
......++++..++|++++|.|.--..-+..+.+++..++++.+|..++
T Consensus 94 ~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~If 142 (312)
T 3g3d_A 94 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 142 (312)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEE
Confidence 6678899999999999999999777777777888888888777776554
No 293
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=64.72 E-value=24 Score=32.74 Aligned_cols=45 Identities=29% Similarity=0.519 Sum_probs=32.5
Q ss_pred hHHHH---HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-cccee
Q 022296 102 AFKEY---VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKF 150 (299)
Q Consensus 102 ~~~~y---l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~ 150 (299)
..+|| -+.|.+-|| ++|=.-| |+.+...++++.+.++|-+ +.|.+
T Consensus 195 ~leEl~avAkAca~~g~-~lEPTGG---Idl~Nf~~I~~i~l~aGv~~viPHI 243 (275)
T 3m6y_A 195 HEEEYRAVAKACAEEGF-ALEPTGG---IDKENFETIVRIALEANVEQVIPHV 243 (275)
T ss_dssp THHHHHHHHHHHHHHTC-EEEEBSS---CCTTTHHHHHHHHHHTTCSCBCCEE
T ss_pred cHHHHHHHHHHHHHcCc-eECCCCC---ccHhHHHHHHHHHHHcCCCeecccc
Confidence 45555 466778899 8887655 5556666788999998876 77765
No 294
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=64.67 E-value=17 Score=31.25 Aligned_cols=39 Identities=21% Similarity=0.337 Sum_probs=24.4
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE
Q 022296 199 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 244 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli 244 (299)
++++..+++||+.|++=+.-+.+ .+.+.++++.+| .+++
T Consensus 88 ~~~~~~l~~Gad~V~lg~~~l~~------p~~~~~~~~~~g-~~~~ 126 (244)
T 1vzw_A 88 DTLAAALATGCTRVNLGTAALET------PEWVAKVIAEHG-DKIA 126 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHC------HHHHHHHHHHHG-GGEE
T ss_pred HHHHHHHHcCCCEEEECchHhhC------HHHHHHHHHHcC-CcEE
Confidence 34588899999999986642222 345666666555 4443
No 295
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=64.46 E-value=50 Score=27.65 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=42.9
Q ss_pred ccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 022296 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (299)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (299)
+|.+=+...+ .+.++..-++++.+++.+.-| +.. + .++++.+.+.|.|.|-+. .. +
T Consensus 33 ~~~i~l~~~~-----~~~~~~i~~i~~~~~~~l~vg~g~~~------~----~~~i~~a~~~Gad~V~~~--~~--~--- 90 (212)
T 2v82_A 33 FDAVEIPLNS-----PQWEQSIPAIVDAYGDKALIGAGTVL------K----PEQVDALARMGCQLIVTP--NI--H--- 90 (212)
T ss_dssp CCEEEEETTS-----TTHHHHHHHHHHHHTTTSEEEEECCC------S----HHHHHHHHHTTCCEEECS--SC--C---
T ss_pred CCEEEEeCCC-----hhHHHHHHHHHHhCCCCeEEEecccc------C----HHHHHHHHHcCCCEEEeC--CC--C---
Confidence 6777776543 223443344666677654443 321 1 357899999999999522 21 1
Q ss_pred HHHHHHHHHHcCCcccc
Q 022296 132 LLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 132 r~~lI~~~~~~G~~v~~ 148 (299)
.++++.+++.|.++.+
T Consensus 91 -~~~~~~~~~~g~~~~~ 106 (212)
T 2v82_A 91 -SEVIRRAVGYGMTVCP 106 (212)
T ss_dssp -HHHHHHHHHTTCEEEC
T ss_pred -HHHHHHHHHcCCCEEe
Confidence 3467778887776544
No 296
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=64.41 E-value=16 Score=31.45 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=63.4
Q ss_pred HHHHHHhhccc-ccEEEeeCcccc--c--CChhHHHHHHHHHHhCCceecC-CcHH--------HHHHHhCCchHHHHHH
Q 022296 43 LEDIFESMGQF-VDGLKFSGGSHS--L--MPKPFIEEVVKRAHQHDVYVST-GDWA--------EHLIRNGPSAFKEYVE 108 (299)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs~--l--~p~~~l~eKI~l~~~~gV~v~~-Gtlf--------E~a~~qg~~~~~~yl~ 108 (299)
+++.|+.+.+. .|.+=+ |+... + .+...+++.-++++++|+.++. ++++ +.+ . +.+++.++
T Consensus 17 ~~~~l~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~-~---~~~~~~i~ 91 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIEL-WGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKT-I---EKCEQLAI 91 (286)
T ss_dssp HHHHHHHHHHTTCCEEEE-EHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHH-H---HHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEE-cccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHH-H---HHHHHHHH
Confidence 44555544433 455555 22211 1 2345688888999999996654 2221 211 1 26889999
Q ss_pred HHHHcCCCEEEecCCccc---CChhHH-------HHHHHHHHHcCCccccee
Q 022296 109 DCKQVGFDTIELNVGSLE---IPEETL-------LRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~---i~~~~r-------~~lI~~~~~~G~~v~~E~ 150 (299)
.|+.+|.+.|-+..|... .+.+.+ .++.+.+++.|+++.-|-
T Consensus 92 ~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 143 (286)
T 3dx5_A 92 LANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLET 143 (286)
T ss_dssp HHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEec
Confidence 999999999999888653 233333 345566777888766664
No 297
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=64.07 E-value=22 Score=33.59 Aligned_cols=65 Identities=17% Similarity=0.090 Sum_probs=40.1
Q ss_pred CChhHHHHHHHHHHhCCc-eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 67 MPKPFIEEVVKRAHQHDV-YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
++.+.+.+.|+-.++++- ++.-+... + . .++++.+.+.|.|.|+|+...- ..+...+.|+.+++.
T Consensus 78 ~s~e~~~~~I~~vk~~~~~pvga~ig~------~--~-~e~a~~l~eaGad~I~ld~a~G--~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 78 MDMESQVNEVLKVKNSGGLRVGAAIGV------N--E-IERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSK 143 (361)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEECT------T--C-HHHHHHHHHTTCSEEEECCSCC--SBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccCceEEEEeCC------C--H-HHHHHHHHHcCcCeEEEeCCCC--CcHHHHHHHHHHHHh
Confidence 445556677777776653 22221100 2 2 6788899999999999854432 234456778887774
No 298
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=63.91 E-value=1.8 Score=38.58 Aligned_cols=95 Identities=11% Similarity=0.105 Sum_probs=0.0
Q ss_pred cchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 38 SSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 38 ~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
+.+....++++.+|+|+|++|++..-..-+..+.+++. +++|..+. +..=+.-.|+.+..|++.+.++|.|+
T Consensus 24 ~~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~~l----r~~~~~v~----lD~kl~Dip~t~~~~i~~~~~~Gad~ 95 (245)
T 1eix_A 24 HNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVREL----QQRGFDIF----LDLKFHDIPNTAAHAVAAAADLGVWM 95 (245)
T ss_dssp SSHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHHHHHHH----HHTTCCEE----EEEEECSCHHHHHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHhCccCcEEEEcHHHHHHhCHHHHHHH----HHCCCcEE----EEeeccccHHHHHHHHHHHHhCCCCE
Q ss_pred EEecCCcccCChhHHHHHHHHHHHcC
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSAG 143 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~G 143 (299)
|-|.- ....+...++++.+++.|
T Consensus 96 vTvH~---~~g~~~l~~~~~~~~~~G 118 (245)
T 1eix_A 96 VNVHA---SGGARMMTAAREALVPFG 118 (245)
T ss_dssp EEEBG---GGCHHHHHHHHHTTGGGG
T ss_pred EEEec---cCCHHHHHHHHHHHHHcC
No 299
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=63.83 E-value=10 Score=33.21 Aligned_cols=146 Identities=12% Similarity=0.117 Sum_probs=80.8
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC------C-cHHHHHHHhCCchHHHHHHHHH
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------G-DWAEHLIRNGPSAFKEYVEDCK 111 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~------G-tlfE~a~~qg~~~~~~yl~~~k 111 (299)
+...++.+++.+-+| |+++..++| ..++.-.+.++ ++.+++ | ..++. +. ...+.+.
T Consensus 18 t~~~i~~l~~~a~~~------g~~~v~v~~-~~v~~~~~~l~--~v~v~~v~~~P~g~~~~~~-------k~-~~~~~A~ 80 (225)
T 1mzh_A 18 SEKEIEEFVLKSEEL------GIYAVCVNP-YHVKLASSIAK--KVKVCCVIGFPLGLNKTSV-------KV-KEAVEAV 80 (225)
T ss_dssp CHHHHHHHHHHHHHT------TCSEEEECG-GGHHHHHHHCS--SSEEEEEESTTTCCSCHHH-------HH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHh------CCeEEEECH-HHHHHHHHHhc--CCceeeEecCCCCccchhh-------hH-HHHHHHH
Confidence 666888888877766 555544555 44655344443 676653 2 12221 11 2346777
Q ss_pred HcCCCEEE--ecCCccc-CChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCc
Q 022296 112 QVGFDTIE--LNVGSLE-IPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (299)
Q Consensus 112 ~lGF~~IE--ISdGti~-i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 188 (299)
+.|+|.|+ ++-|... -..+...+.|+.+++.-= | +.+|--. |. | .
T Consensus 81 ~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~---p-v~vKvi~-e~-------------~--------------~ 128 (225)
T 1mzh_A 81 RDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP---S-AVHKVIV-ET-------------P--------------Y 128 (225)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT---T-SEEEEEC-CG-------------G--------------G
T ss_pred HcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc---C-ceEEEEE-eC-------------C--------------C
Confidence 89999999 4444421 123444556777776421 2 3344200 00 0 1
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
++.+++ ++-++...++|||.|-+-. |.+ .|....+.+..+.+.++
T Consensus 129 l~~~~~---~~~a~~a~eaGad~I~tst-g~~--~gga~~~~i~~v~~~v~ 173 (225)
T 1mzh_A 129 LNEEEI---KKAVEICIEAGADFIKTST-GFA--PRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp CCHHHH---HHHHHHHHHHTCSEEECCC-SCS--SSCCCHHHHHHHHHHHT
T ss_pred CCHHHH---HHHHHHHHHhCCCEEEECC-CCC--CCCCCHHHHHHHHHHhC
Confidence 124455 7778899999999994322 442 24345667776666553
No 300
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=63.71 E-value=5.5 Score=38.57 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=89.9
Q ss_pred HHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHcCCcccceeeee
Q 022296 79 AHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 79 ~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----i~~~~r~~lI~~~~~~G~~v~~E~gvK 153 (299)
-+..||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+..+
T Consensus 26 M~~LGiSvYp~~~~~~--------~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~ 97 (385)
T 1x7f_A 26 ERKLGISLYPEHSTKE--------KDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPA 97 (385)
T ss_dssp CCEEEEEECGGGSCHH--------HHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHheEEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 34578888887 4555 2348999999999998865543322 223556788999999999988777653
Q ss_pred cCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc--------------c-
Q 022296 154 FNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD--------------D- 218 (299)
Q Consensus 154 ~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar--------------g- 218 (299)
.- ...| ++.+.+ +..-+.|++-+=++-- |
T Consensus 98 ~~-~~Lg----------------------------~s~~dl-------~~f~~lGi~gLRLD~Gf~~~eia~ls~n~~gl 141 (385)
T 1x7f_A 98 VF-DQLG----------------------------ISYSDL-------SFFAELGADGIRLDVGFDGLTEAKMTNNPYGL 141 (385)
T ss_dssp CC-----------------------------------CCCT-------HHHHHHTCSEEEESSCCSSHHHHHHTTCTTCC
T ss_pred HH-HHcC----------------------------CCHHHH-------HHHHHcCCCEEEEcCCCCHHHHHHHhcCCCCC
Confidence 11 1111 112233 4556679998888762 2
Q ss_pred -cccCCCcccHHHHHHHHhc-cCCCceEEec-----CCch---------hHHHHHHHhCCCcccccCCCC
Q 022296 219 -VCKHADSLRADIIAKVIGR-LGLEKTMFEA-----TNPR---------TSEWFIRRYGPKVNLFVDHSQ 272 (299)
Q Consensus 219 -i~d~~G~~r~d~i~~ii~~-l~~eklifEA-----P~k~---------qQ~~fI~~fG~~VNLgI~~~e 272 (299)
|.=+.-+ .++.++.|++. ...++| +| |++. ++...+++||-+|=-||+-..
T Consensus 142 kIeLNASt-~~~~l~~l~~~~~n~~~l--~acHNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~ 208 (385)
T 1x7f_A 142 KIELNVSN-DIAYLENILSHQANKSAL--IGCHNFYPQKFTGLPYDYFIRCSERFKKHGIRSAAFITSHV 208 (385)
T ss_dssp EEEEETTS-CSSHHHHHTTSSCCGGGE--EEECCCBCSTTCSBCHHHHHHHHHHHHHTTCCCEEEECCSS
T ss_pred EEEEeCcC-CHHHHHHHHHcCCChHHe--EEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 2222333 67778888753 335554 33 3332 377788899987776676543
No 301
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=63.54 E-value=7.6 Score=38.13 Aligned_cols=48 Identities=23% Similarity=0.299 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+=|+++++|||++|++|- |.-. + +.++..++|+.++++|++|+-.+-.
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346788999999999872 2111 1 3688999999999999999877755
No 302
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=63.51 E-value=27 Score=33.02 Aligned_cols=24 Identities=8% Similarity=-0.007 Sum_probs=18.7
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
.++. ++.++..-++|+++|-+=++
T Consensus 254 ~~~~---~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 254 EAMA---FYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp HHHH---HHHHHHHHHTTCSEEEEECC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEeCC
Confidence 4556 77788888999999988554
No 303
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=63.49 E-value=7.6 Score=41.11 Aligned_cols=50 Identities=16% Similarity=0.395 Sum_probs=40.1
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------------C-----cccCC---------hhHHHHHHHHHHHcCCcccceee
Q 022296 103 FKEYVEDCKQVGFDTIELNV-----------------G-----SLEIP---------EETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------------G-----ti~i~---------~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+.+-+.++++|||++|+++= | ...++ .++..++|+.++++|++|+-.+-
T Consensus 635 i~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 635 IAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 44558999999999999972 2 13443 78999999999999999988775
Q ss_pred e
Q 022296 152 V 152 (299)
Q Consensus 152 v 152 (299)
.
T Consensus 715 ~ 715 (844)
T 3aie_A 715 P 715 (844)
T ss_dssp C
T ss_pred c
Confidence 5
No 304
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=63.37 E-value=7.8 Score=36.26 Aligned_cols=75 Identities=11% Similarity=0.102 Sum_probs=49.6
Q ss_pred CChhHHHHHHHHHHhCCceec--CCcHH--HHHHHh-CCchHH-HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022296 67 MPKPFIEEVVKRAHQHDVYVS--TGDWA--EHLIRN-GPSAFK-EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV~v~--~Gtlf--E~a~~q-g~~~~~-~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (299)
+|-..++.-|+-+|++|++|. .|||- |.+-.. +.++|. .|.+.++++|||.|.|.=-.-. ..+.+.+.++.++
T Consensus 58 ~~~~~~~~~I~~~q~~G~kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~-~~d~~~~aL~~l~ 136 (311)
T 2dsk_A 58 IPLEKFVDEVRELREIGGEVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGI-DADKLADALLIVQ 136 (311)
T ss_dssp BCGGGGHHHHHHHHTTTCEEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCC-CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCeEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCc-cHHHHHHHHHHHH
Confidence 344678899999999999665 46542 222221 212344 4889999999999987532222 2367888888887
Q ss_pred Hc
Q 022296 141 SA 142 (299)
Q Consensus 141 ~~ 142 (299)
+.
T Consensus 137 ~~ 138 (311)
T 2dsk_A 137 RE 138 (311)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 305
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=63.37 E-value=7.3 Score=38.99 Aligned_cols=47 Identities=13% Similarity=0.188 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
=|.++|+||+++|+++= |.- .+ +.++..+||+.++++|++|+-.+-.
T Consensus 244 kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~ 308 (645)
T 4aef_A 244 KIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVF 308 (645)
T ss_dssp THHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred hhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEecc
Confidence 36788999999999973 211 11 4688999999999999999988755
No 306
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=63.16 E-value=28 Score=31.84 Aligned_cols=99 Identities=17% Similarity=0.267 Sum_probs=69.4
Q ss_pred chhHHHHHHHhhcccc----------cEEEeeCccc------ccCChhHHHHHHHHHHhCCc---eecC-CcHHHHHHHh
Q 022296 39 SHNVLEDIFESMGQFV----------DGLKFSGGSH------SLMPKPFIEEVVKRAHQHDV---YVST-GDWAEHLIRN 98 (299)
Q Consensus 39 g~~~l~DlLe~ag~yI----------D~lKfg~GTs------~l~p~~~l~eKI~l~~~~gV---~v~~-GtlfE~a~~q 98 (299)
|-.+.+.+|...-.+| -++|++.|-. ...| ++.-|+++++-|+ ++|| ||+--
T Consensus 101 gag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~---vetAiaml~dmG~~SvKffPm~Gl~~----- 172 (249)
T 3m0z_A 101 GVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVP---LETAIALLKDMGGSSIKYFPMGGLKH----- 172 (249)
T ss_dssp GHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEE---HHHHHHHHHHTTCCEEEECCCTTTTT-----
T ss_pred chHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceee---HHHHHHHHHHcCCCeeeEeecCCccc-----
Confidence 5556666776544554 4689999932 2333 7889999999997 8888 65310
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc-cccee
Q 022296 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKF 150 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~-v~~E~ 150 (299)
-+.+...-+.|.+-|| ++|=.-| |+.+...++++.+.++|-+ +.|.+
T Consensus 173 -l~E~~avAka~a~~g~-~lEPTGG---Idl~N~~~I~~i~l~aGv~~viPHI 220 (249)
T 3m0z_A 173 -RAEFEAVAKACAAHDF-WLEPTGG---IDLENYSEILKIALDAGVSKIIPHI 220 (249)
T ss_dssp -HHHHHHHHHHHHHTTC-EEEEBSS---CCTTTHHHHHHHHHHHTCSCBCCBC
T ss_pred -HHHHHHHHHHHHHcCc-eECCCCC---ccHhhHHHHHHHHHHcCCCeecccc
Confidence 0123444578999999 9998665 5566677899999999876 77765
No 307
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=63.12 E-value=55 Score=35.63 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=67.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
++++++.+.+.|.|.|-|.+..-++... ..+++.+++.|..+. ..+..-...+++.+.
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd~~~~--~~~~~~~~e~g~~~~--~~i~~~~~~~~pe~~------------------ 686 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNWVDQM--KVANEAVQEAGKISE--GTICYTGDILNPERS------------------ 686 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCGGGG--HHHHHHHHHTTCEEE--EEEECCSCTTCTTTC------------------
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCHHHHH--HHHHHHHHHHhhhee--EEEeecccccChhhc------------------
Confidence 5677888889999999998877666443 468888888875543 222111111111110
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhcc
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l 238 (299)
...+++.+ ++.++.-.++||+.| .|+|..|-.....+.++++.+
T Consensus 687 ----~~~~~~~~---~~~a~~~~~~Ga~~i-----~l~Dt~G~~~P~~~~~lv~~l 730 (1150)
T 3hbl_A 687 ----NIYTLEYY---VKLAKELEREGFHIL-----AIKDMAGLLKPKAAYELIGEL 730 (1150)
T ss_dssp ----SSSSHHHH---HHHHHHHHHTTCSEE-----EEEETTCCCCHHHHHHHHHHH
T ss_pred ----CCCCHHHH---HHHHHHHHHcCCCee-----eEcCccCCCCHHHHHHHHHHH
Confidence 01237778 899999999999865 478888888888777776543
No 308
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=63.08 E-value=11 Score=33.47 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=31.2
Q ss_pred HHHHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 103 FKEYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.++.++.+|++||++|-|.-+ ...=+.+...++|+.+.++|++|+-+++-
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~ 86 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQNKMVAVVEVHD 86 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445677777788887777421 11123445556777777888877766543
No 309
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=62.84 E-value=5.2 Score=33.97 Aligned_cols=65 Identities=20% Similarity=0.229 Sum_probs=52.8
Q ss_pred HHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022296 76 VKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 76 I~l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
-++++++|| .+.- |--.++|+.+- ...+.++||+.+=++|.+-..+++.....++.+++.|-.+.
T Consensus 117 ~~~L~~~gi~~lvv~G~~t~~CV~~T-------a~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 117 LNWLRQRGVDEVDVVGIATDHCVRQT-------AEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHH-------HHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCEEEEEEecccHHHHHH-------HHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 345677899 4544 77888888885 33456799999999999999999999999999999887654
No 310
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=62.74 E-value=8.7 Score=35.17 Aligned_cols=49 Identities=10% Similarity=0.060 Sum_probs=39.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChh-HHHHHHHHHHhCCceec
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVS 87 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~-~l~eKI~l~~~~gV~v~ 87 (299)
......++++..++||+++|.|.--..-+..+ .+++..++++++|..|+
T Consensus 40 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~~v~~L~~l~~~~g~~If 89 (267)
T 3gdm_A 40 TTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLF 89 (267)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCcCcEEEECHHHHHhcCHHHHHHHHHHHHhhcCCeEE
Confidence 56788999999999999999998777767777 77777777766665544
No 311
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=62.65 E-value=26 Score=30.64 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=58.5
Q ss_pred HHHHHHHHcCCCEE--EecCCcccCChhH----HHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 105 EYVEDCKQVGFDTI--ELNVGSLEIPEET----LLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 105 ~yl~~~k~lGF~~I--EISdGti~i~~~~----r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
+-++.+.+.|++.| -++.|+. +.++ -.++++.+++.|..+..|.+. .+. .+ +..+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~~~-~G~-~l-------------~~~~-- 163 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMMYP-RGK-HI-------------QNER-- 163 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETST--THHHHHHHHHHHHHHHHHHTCCEEEEEEE-CST-TC-------------SCTT--
T ss_pred HHHHHHHHcCCCEEEEEEecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEeCC-CCc-cc-------------CCCC--
Confidence 44667888999999 7878865 4443 335666677779888877643 111 11 0001
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
+.+.. .+.++...++|||+|.+-- ....+.+.++.+.++
T Consensus 164 -----------~~~~~---~~~a~~a~~~Gad~i~~~~--------~~~~~~l~~i~~~~~ 202 (273)
T 2qjg_A 164 -----------DPELV---AHAARLGAELGADIVKTSY--------TGDIDSFRDVVKGCP 202 (273)
T ss_dssp -----------CHHHH---HHHHHHHHHTTCSEEEECC--------CSSHHHHHHHHHHCS
T ss_pred -----------CHhHH---HHHHHHHHHcCCCEEEECC--------CCCHHHHHHHHHhCC
Confidence 12222 2334788899999999862 134677778876664
No 312
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=62.64 E-value=19 Score=32.76 Aligned_cols=85 Identities=15% Similarity=0.267 Sum_probs=61.4
Q ss_pred ccEEEe-eCcccccCChhHHHHHHHHHHhCCceec--C-CcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCccc-
Q 022296 54 VDGLKF-SGGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLE- 126 (299)
Q Consensus 54 ID~lKf-g~GTs~l~p~~~l~eKI~l~~~~gV~v~--~-GtlfE~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~- 126 (299)
++.+-| |+|.-.+.| .+.+.++.++++|+.+. | |++ ++.++.+++.| .+.|-||=-+.+
T Consensus 142 ~~~v~~sggGEPll~~--~l~~ll~~~~~~g~~i~l~TNG~~------------~e~l~~L~~~g~~~~~l~isld~~~~ 207 (342)
T 2yx0_A 142 PTHAAISLSGEPMLYP--YMGDLVEEFHKRGFTTFIVTNGTI------------PERLEEMIKEDKLPTQLYVSITAPDI 207 (342)
T ss_dssp CCEEEECSSSCGGGST--THHHHHHHHHHTTCEEEEEECSCC------------HHHHHHHHHTTCCCSEEEEEECCSSH
T ss_pred CCEEEEcCCCcccchh--hHHHHHHHHHHCCCcEEEEcCCCc------------HHHHHHHHhcCCCCCEEEEEccCCCH
Confidence 466888 588888887 69999999999997544 4 443 45566778877 899999855431
Q ss_pred ------------CChhHHHHHHHHHHHcCCcccceeee
Q 022296 127 ------------IPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 127 ------------i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-+.++..+.|+.+++.|+.+.-++.+
T Consensus 208 e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~l 245 (342)
T 2yx0_A 208 ETYNSVNIPMIPDGWERILRFLELMRDLPTRTVVRLTL 245 (342)
T ss_dssp HHHHHHHCBSSSCHHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred HHHHHHhCCCcccHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 12566677888888888776655555
No 313
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.56 E-value=59 Score=31.75 Aligned_cols=55 Identities=25% Similarity=0.262 Sum_probs=31.3
Q ss_pred ccEEEeeCcccccCChhHHHHHHHHHHh-C-CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022296 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQ-H-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~-~-gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (299)
+|++-+... .-.++. +.+.|+-.++ + ++++..|+- .-.+..+.+.+.|.|+|-|+
T Consensus 242 ~d~I~id~a--~g~~~~-~~~~v~~i~~~~p~~~Vi~g~v----------~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 242 VDVVVVDTA--HGHSKG-VIERVRWVKQTFPDVQVIGGNI----------ATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp CSEEEEECS--CCSBHH-HHHHHHHHHHHCTTSEEEEEEE----------CSHHHHHHHHHTTCSEEEEC
T ss_pred cceEEeccc--CCcchh-HHHHHHHHHHHCCCceEEEeee----------CcHHHHHHHHHcCCCEEEEC
Confidence 677766533 233433 4444544444 3 666665520 11233567888999999985
No 314
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=62.29 E-value=85 Score=27.86 Aligned_cols=167 Identities=13% Similarity=0.056 Sum_probs=92.8
Q ss_pred CCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCCh--------hHHHHHHHHHHhCC-ceecCC--c
Q 022296 22 RRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPK--------PFIEEVVKRAHQHD-VYVSTG--D 90 (299)
Q Consensus 22 R~~GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~--------~~l~eKI~l~~~~g-V~v~~G--t 90 (299)
+..|++.++..|. .+...+.+++.+..|=++ -.+.|-+.-... +.+++..+++.+++ -.+.-| |
T Consensus 37 ~~~GV~~~v~~~~----~~~~~~~~~~la~~~~~v-~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiG 111 (301)
T 2xio_A 37 VEIGVKKFMITGG----NLQDSKDALHLAQTNGMF-FSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECG 111 (301)
T ss_dssp HHHTEEEEEECCC----SHHHHHHHHHHHTTCTTE-EEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEE
T ss_pred HHCCCCEEEEeCC----CHHHHHHHHHHHHHCCCE-EEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEee
Confidence 4569999999987 556788888888887663 355554332221 22556666666542 111212 1
Q ss_pred ----HH--H-HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcc
Q 022296 91 ----WA--E-HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDR 163 (299)
Q Consensus 91 ----lf--E-~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~ 163 (299)
+. . ...++. .|+..++.|+++|...+==+.. ..+ ++++.+++.+.. +..++-...+ |
T Consensus 112 Ld~~~~~~~~~~~Q~~--~f~~ql~lA~~~~lPv~iH~r~----a~~---~~~~il~~~~~~--~~~~i~H~f~--g--- 175 (301)
T 2xio_A 112 LDFDRLQFCPKDTQLK--YFEKQFELSEQTKLPMFLHCRN----SHA---EFLDITKRNRDR--CVGGVVHSFD--G--- 175 (301)
T ss_dssp EETTCTTTSCHHHHHH--HHHHTHHHHHHHCCCEEEEEES----CHH---HHHHHHHHTGGG--SSCEEETTCC--C---
T ss_pred CCCCcCCCCCHHHHHH--HHHHHHHHHHHhCCcEEEEecC----chH---HHHHHHHhccCC--CCcEEEEccC--C---
Confidence 11 1 122333 7889999999999887633321 233 345555553221 1112311111 0
Q ss_pred cccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCce
Q 022296 164 DRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKT 243 (299)
Q Consensus 164 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekl 243 (299)
+ .+.+++.++.|.+.=+ .|.+-. +... .++++.+|++||
T Consensus 176 ------------------------~---------~~~~~~~l~~g~yi~~---~g~~~~----~~~~-~~~~~~~p~drl 214 (301)
T 2xio_A 176 ------------------------T---------KEAAAALIDLDLYIGF---NGCSLK----TEAN-LEVLKSIPSEKL 214 (301)
T ss_dssp ------------------------C---------HHHHHHHHHTTCEEEE---CGGGSS----SHHH-HHHHHTSCGGGE
T ss_pred ------------------------C---------HHHHHHHHhcCcEEEE---cccccC----ChHH-HHHHHhCChHHE
Confidence 1 3344777888865433 233211 1222 378889999999
Q ss_pred EEecCCc
Q 022296 244 MFEATNP 250 (299)
Q Consensus 244 ifEAP~k 250 (299)
++|..-|
T Consensus 215 LleTD~P 221 (301)
T 2xio_A 215 MIETDAP 221 (301)
T ss_dssp EECCCTT
T ss_pred EEecCCC
Confidence 9998765
No 315
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=62.19 E-value=2.2 Score=41.37 Aligned_cols=24 Identities=4% Similarity=0.106 Sum_probs=19.6
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCcc
Q 022296 102 AFKEYVEDCKQ-VGFDTIELNVGSL 125 (299)
Q Consensus 102 ~~~~yl~~~k~-lGF~~IEISdGti 125 (299)
...++.+.+.+ .|+|+|+||.|+.
T Consensus 265 d~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 265 EFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp HHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred HHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 35567777888 9999999999875
No 316
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=62.15 E-value=36 Score=28.30 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=22.2
Q ss_pred HHHHHHHccCcEEEEeccccccCCCcccHHHHHHHH
Q 022296 200 RAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVI 235 (299)
Q Consensus 200 ~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii 235 (299)
+++..++|||+.|++ +|.|++..+ -...++++.
T Consensus 171 ~~~~~~~aGad~vvv-GsaI~~~~d--p~~~~~~~~ 203 (207)
T 3ajx_A 171 TIPAVQKAGAEVAVA-GGAIYGAAD--PAAAAKELR 203 (207)
T ss_dssp GHHHHHHTTCSEEEE-SHHHHTSSS--HHHHHHHHH
T ss_pred HHHHHHHcCCCEEEE-eeeccCCCC--HHHHHHHHH
Confidence 447779999998887 577888753 233444443
No 317
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=62.06 E-value=22 Score=34.37 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=26.4
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
.++++.+-+.|.+.|.|....- .++...+.|+.+++.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G--~~~~~~e~I~~ik~~ 182 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG--HSLNIIRTLKEIKSK 182 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC--SBHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--CcccHHHHHHHHHhc
Confidence 5789999999999999843221 234446788888875
No 318
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=61.99 E-value=9.1 Score=36.68 Aligned_cols=43 Identities=28% Similarity=0.434 Sum_probs=33.8
Q ss_pred HHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCccc
Q 022296 105 EYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 105 ~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
..++.++++ ||+.||++-..+ ..+.++..++-+.+.+.||.+.
T Consensus 34 ~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~ 81 (386)
T 3bdk_A 34 VTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEIT 81 (386)
T ss_dssp SCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 478889999 999999985433 3566788888888999998853
No 319
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=61.69 E-value=8.8 Score=38.45 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 022296 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d 164 (299)
+-|+++|+|||++|+++- |.-.. +.++..++|+.+.++|++|+-.+-..+- +. +.
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~----~~-~~ 222 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHF----GP-SG 222 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCC----CS-SS
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEeccccc----cc-CC
Confidence 346888999999999862 22211 2688999999999999999988765321 11 11
Q ss_pred ccccccc-------cCCCCccchhcccCCCccchhhhhhhHHHHHHHH-HccCcEEEEecc-ccccCC-CcccHHHHHHH
Q 022296 165 RAFGAYV-------ARAPRSTDKLFLASNPEIEVGVGINKSRRAERCL-EAGADMIMIDSD-DVCKHA-DSLRADIIAKV 234 (299)
Q Consensus 165 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dL-eAGA~~VIiEar-gi~d~~-G~~r~d~i~~i 234 (299)
..+..+. .+..|...+- ...++ -.+.+ ++.++..+ +.|+|=.-+++= .+.+.. ..+-.++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~w~~~ln-~~~~~--v~~~i---~~~~~~W~~~~gvDGfR~D~~~~i~~~~~~~fl~~~~~~- 295 (602)
T 2bhu_A 223 NYLSSYAPSYFTDRFSSAWGMGLD-YAEPH--MRRYV---TGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQE- 295 (602)
T ss_dssp CCHHHHCGGGEEEEEECSSSEEEC-TTSHH--HHHHH---HHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHH-
T ss_pred ccccccCcccccCCCCCCCCCCcc-CCCHH--HHHHH---HHHHHHHHHHhCCCEEEEechHhhhccchHHHHHHHHHH-
Confidence 1111111 1234532210 00000 02344 66688888 589999988885 344432 1222222222
Q ss_pred HhccCCCceEEecCC
Q 022296 235 IGRLGLEKTMFEATN 249 (299)
Q Consensus 235 i~~l~~eklifEAP~ 249 (299)
+...+--.+|-|...
T Consensus 296 v~~~~~~~li~E~~~ 310 (602)
T 2bhu_A 296 IHELGGTHLLLAEDH 310 (602)
T ss_dssp HHTTCSCCEEEEECS
T ss_pred HhhcCCeEEEEEeCC
Confidence 233344567788763
No 320
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=61.62 E-value=19 Score=30.58 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGS 124 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGt 124 (299)
.+++.++.|+++|.+.|-+.-|.
T Consensus 85 ~~~~~i~~a~~lG~~~v~~~~g~ 107 (278)
T 1i60_A 85 EFKGMMETCKTLGVKYVVAVPLV 107 (278)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCB
T ss_pred HHHHHHHHHHHcCCCEEEEecCC
Confidence 45666666666666666664443
No 321
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=61.57 E-value=72 Score=29.86 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=27.4
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
.++. ++.++..-++|+++|-+=++...... ....+.+.+|-+.++
T Consensus 250 ~~~~---~~~a~~l~~~G~d~i~v~~~~~~~~~-~~~~~~~~~v~~~~~ 294 (364)
T 1vyr_A 250 EADA---LYLIEELAKRGIAYLHMSETDLAGGK-PYSEAFRQKVRERFH 294 (364)
T ss_dssp HHHH---HHHHHHHHHTTCSEEEEECCBTTBCC-CCCHHHHHHHHHHCC
T ss_pred HHHH---HHHHHHHHHhCCCEEEEecCcccCCC-cccHHHHHHHHHHCC
Confidence 5566 77788888999999988765321111 123455555555544
No 322
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=61.55 E-value=8.2 Score=39.15 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=36.2
Q ss_pred HHHHHHcCCCEEEecCCcc-------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSL-------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti-------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++++|||++|.++-=+- .+ +.++..+||+.++++|++|+-.+-.
T Consensus 271 LdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 334 (696)
T 4aee_A 271 IDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITM 334 (696)
T ss_dssp HHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 6788999999999973111 11 3688999999999999999877644
No 323
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=61.53 E-value=15 Score=34.46 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCCEEEec---------CCc------ccCChhHHHHHHHHHHHcCCcccceeeee
Q 022296 104 KEYVEDCKQVGFDTIELN---------VGS------LEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS---------dGt------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK 153 (299)
.+-++.++++|+++|-|. .+. -+.+.+.-.++|++|+++||+|.-++.+-
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~ 120 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVN 120 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEee
Confidence 367888899999999883 111 12467788899999999999998877773
No 324
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=61.37 E-value=34 Score=31.77 Aligned_cols=94 Identities=18% Similarity=0.128 Sum_probs=61.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC------------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccccccccc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEI------------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAY 170 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i------------~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~ 170 (299)
++.-++.++..|.+.|-|...+-++ ..+.-.+.|+.+++.|..| +|+-.+..
T Consensus 83 i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v--~f~~~d~~-------------- 146 (325)
T 3eeg_A 83 INIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEV--EFFCEDAG-------------- 146 (325)
T ss_dssp HHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEE--EEEEETGG--------------
T ss_pred HHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE--EEEccccc--------------
Confidence 4444445555599988875443322 2233457899999999875 45542110
Q ss_pred ccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhc
Q 022296 171 VARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGR 237 (299)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~ 237 (299)
..+++.+ ++.+++..++||+.| .|+|..|-..+..+.++++.
T Consensus 147 -----------------~~~~~~~---~~~~~~~~~~G~~~i-----~l~DT~G~~~P~~v~~lv~~ 188 (325)
T 3eeg_A 147 -----------------RADQAFL---ARMVEAVIEAGADVV-----NIPDTTGYMLPWQYGERIKY 188 (325)
T ss_dssp -----------------GSCHHHH---HHHHHHHHHHTCSEE-----ECCBSSSCCCHHHHHHHHHH
T ss_pred -----------------cchHHHH---HHHHHHHHhcCCCEE-----EecCccCCcCHHHHHHHHHH
Confidence 0226777 888999999999865 47888888888777766643
No 325
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=61.20 E-value=10 Score=32.49 Aligned_cols=22 Identities=5% Similarity=-0.010 Sum_probs=17.5
Q ss_pred HHHHHccCcEEEEeccccccCCC
Q 022296 202 ERCLEAGADMIMIDSDDVCKHAD 224 (299)
Q Consensus 202 ~~dLeAGA~~VIiEargi~d~~G 224 (299)
+..++|||+.|++ +|.||.+..
T Consensus 178 ~~~~~aGad~ivv-G~~I~~a~d 199 (216)
T 1q6o_A 178 PLFKGIPIHVFIA-GRSIRDAAS 199 (216)
T ss_dssp GGGTTSCCSEEEE-SHHHHTSSC
T ss_pred HHHHHcCCCEEEE-eehhcCCCC
Confidence 5568999998887 799998653
No 326
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=61.16 E-value=12 Score=35.40 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=37.8
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc---C---------------Ch---hHHHHHHHHHHHcCCcccceee
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGSLE---I---------------PE---ETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~---i---------------~~---~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+.+++.++.+|++||++|-++ ++-. + ++ +..-++|..+.+.|++|+-++.
T Consensus 62 ~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 62 DRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 468999999999999999998 2111 1 11 1223799999999999998765
No 327
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=61.15 E-value=51 Score=28.30 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=60.5
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC---cH-HHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DW-AEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G---tl-fE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
..=+.+..+| +|.+=+. + .+| .+++.-++++++|+.+... ++ -+-...+.-+.+++.++.|+++|.+.
T Consensus 35 ~~l~~~~~~G--~~~vEl~-~---~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 106 (301)
T 3cny_A 35 QLLSDIVVAG--FQGTEVG-G---FFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPV 106 (301)
T ss_dssp HHHHHHHHHT--CCEECCC-T---TCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhC--CCEEEec-C---CCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCE
Confidence 3334444444 5555554 2 134 4778888999999977653 22 22111111126899999999999999
Q ss_pred EEecC------CcccC---------ChhHH-------HHHHHHHHHcCCccccee
Q 022296 118 IELNV------GSLEI---------PEETL-------LRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 118 IEISd------Gti~i---------~~~~r-------~~lI~~~~~~G~~v~~E~ 150 (299)
|=+.. |...- ..+.+ .++.+.+++.|+++.-|-
T Consensus 107 v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 107 AVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp EEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 98753 54321 23333 345566777888765554
No 328
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=61.11 E-value=12 Score=35.33 Aligned_cols=120 Identities=17% Similarity=0.233 Sum_probs=66.4
Q ss_pred HHHHHHHHHHh------CCceecCCc-HHHHHHHhCCch---HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022296 71 FIEEVVKRAHQ------HDVYVSTGD-WAEHLIRNGPSA---FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (299)
Q Consensus 71 ~l~eKI~l~~~------~gV~v~~Gt-lfE~a~~qg~~~---~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (299)
.+.|.++-.++ -+|+++++. |-..- .+... +.++.+.+.+.|.++|++|.++..-....-..+++.++
T Consensus 213 ~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~--~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~ 290 (364)
T 1vyr_A 213 LVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD--NGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVR 290 (364)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC--CCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCcEEEEEcccccccccc--CCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHH
Confidence 45555665554 234667764 32100 01113 44567777888999999999754211111135666666
Q ss_pred HcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEecccc
Q 022296 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDV 219 (299)
Q Consensus 141 ~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi 219 (299)
+. +. +|=++. + .++ .+.+++.|++| ||.|++ +|++
T Consensus 291 ~~-~~-iPvi~~----------G------------------------git-------~~~a~~~l~~g~aD~V~~-gR~~ 326 (364)
T 1vyr_A 291 ER-FH-GVIIGA----------G------------------------AYT-------AEKAEDLIGKGLIDAVAF-GRDY 326 (364)
T ss_dssp HH-CC-SEEEEE----------S------------------------SCC-------HHHHHHHHHTTSCSEEEE-SHHH
T ss_pred HH-CC-CCEEEE----------C------------------------CcC-------HHHHHHHHHCCCccEEEE-CHHH
Confidence 63 00 111111 0 111 34558899999 999998 6665
Q ss_pred ccCCCcccHHHHHHHHhccCCC
Q 022296 220 CKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 220 ~d~~G~~r~d~i~~ii~~l~~e 241 (299)
+.+ .+++.++.+..++.
T Consensus 327 l~~-----P~~~~~~~~g~~l~ 343 (364)
T 1vyr_A 327 IAN-----PDLVARLQKKAELN 343 (364)
T ss_dssp HHC-----TTHHHHHHHTCCCC
T ss_pred HhC-----hhHHHHHHcCCCCC
Confidence 542 56788887665543
No 329
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=61.01 E-value=99 Score=28.37 Aligned_cols=63 Identities=10% Similarity=0.142 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHhCCcee--cCCcHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 69 KPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v--~~GtlfE~a~~qg~~~~~~yl~~~k~lG--F~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
++.+++.++.+++.|+.+ ..|..- ..-+..+.+.+.| ++.|+++-.. . ......+.|+.+++.
T Consensus 80 ~~~~~~~i~~~~~~g~~v~v~~g~~~---------~~~~~a~~~~~~g~~~~~i~i~~~~-G-~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 80 PEKRISFIRDMQSRGLIASISVGVKE---------DEYEFVQQLAAEHLTPEYITIDIAH-G-HSNAVINMIQHIKKH 146 (336)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEECCSH---------HHHHHHHHHHHTTCCCSEEEEECSS-C-CSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCeEEEeCCCCH---------HHHHHHHHHHhcCCCCCEEEEECCC-C-CcHHHHHHHHHHHHh
Confidence 345677788888777532 223211 1113355667778 9999985321 1 334455778888774
No 330
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=60.79 E-value=3.7 Score=41.13 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=25.6
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC---------ChhHHHHHHHHHHH
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEI---------PEETLLRYVRLVKS 141 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i---------~~~~r~~lI~~~~~ 141 (299)
..++.+.+.+.|.|+|++|.|+.+- +......+++.+++
T Consensus 230 ~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (671)
T 1ps9_A 230 TVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKG 277 (671)
T ss_dssp HHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHH
Confidence 4456677888899999999776421 12233456666665
No 331
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=60.54 E-value=6.1 Score=32.95 Aligned_cols=65 Identities=26% Similarity=0.206 Sum_probs=52.5
Q ss_pred HHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 77 KRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 77 ~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
+.++++|| .+. .|-..++|+.+- ...+.++||+.+=++|.+-+.+++.....++.++..|-.+.+
T Consensus 113 ~~L~~~gi~~lvi~G~~t~~CV~~T-------a~da~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 113 KILRGNGVKRVYICGVATEYCVRAT-------ALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIVQ 179 (180)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHH-------HHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHHhCCCCEEEEEEeecCHHHHHH-------HHHHHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEEe
Confidence 45577899 444 477889998885 334667899999999999999999999999999998766543
No 332
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=60.50 E-value=8.1 Score=36.40 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=42.4
Q ss_pred eecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC------Cc-------------c-----cC-----ChhHHHHH
Q 022296 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV------GS-------------L-----EI-----PEETLLRY 135 (299)
Q Consensus 85 ~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd------Gt-------------i-----~i-----~~~~r~~l 135 (299)
..++++|-.+ .+=++++++|||++|+++= +. - .+ +.++..++
T Consensus 10 q~f~~~~~~i---------~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~l 80 (422)
T 1ua7_A 10 HAWNWSFNTL---------KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEM 80 (422)
T ss_dssp ECTTBCHHHH---------HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHH
T ss_pred EEecCCHHHH---------HHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHH
Confidence 3456776433 2335678999999999875 21 0 01 36889999
Q ss_pred HHHHHHcCCcccceeee
Q 022296 136 VRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 136 I~~~~~~G~~v~~E~gv 152 (299)
|+.++++|++|+-.+-.
T Consensus 81 v~~~h~~Gi~VilD~V~ 97 (422)
T 1ua7_A 81 CAAAEEYGIKVIVDAVI 97 (422)
T ss_dssp HHHHHTTTCEEEEEECC
T ss_pred HHHHHHCCCEEEEEecc
Confidence 99999999999887755
No 333
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=60.45 E-value=8.6 Score=37.69 Aligned_cols=47 Identities=19% Similarity=0.164 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
=++++++|||++|.++- |.-. + +.++..++|+.++++|++|+-.+-.
T Consensus 36 ~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 36 KLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 36788999999999872 2211 1 3678999999999999999877755
No 334
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=60.39 E-value=14 Score=33.07 Aligned_cols=48 Identities=21% Similarity=0.338 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCCEEEecCC---------cccCCh---hHHHHHHHHHHHcCCcccceee
Q 022296 104 KEYVEDCKQVGFDTIELNVG---------SLEIPE---ETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISdG---------ti~i~~---~~r~~lI~~~~~~G~~v~~E~g 151 (299)
++.++.+|++||++|-|+-+ .-.+++ +.-.++|+.+.++|++|+-.+.
T Consensus 44 ~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh 103 (320)
T 3nco_A 44 DEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCH 103 (320)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence 67778888888888887621 122332 3334677778888888776554
No 335
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=60.35 E-value=9.3 Score=37.67 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=36.8
Q ss_pred HHHHHHHcCCCEEEec---------CCccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELN---------VGSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEIS---------dGti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
=|+++++|||++|++| .|.-. + +.++..++|+.++++|++|+-.+-.
T Consensus 50 ~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 50 KLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp THHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3678899999999997 22221 2 3688999999999999999877755
No 336
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=59.98 E-value=8 Score=34.78 Aligned_cols=46 Identities=9% Similarity=0.162 Sum_probs=35.7
Q ss_pred HHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC
Q 022296 201 AERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 201 ~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP 248 (299)
+++.| +||++|++-+. ...++|++|.+++.++++.++-++++.=..
T Consensus 90 ~~~~l-~Ga~~Viigs~-a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD 135 (260)
T 2agk_A 90 CLEWL-KWASKVIVTSW-LFTKEGHFQLKRLERLTELCGKDRIVVDLS 135 (260)
T ss_dssp HHHHT-TTCSCEEECGG-GBCTTCCBCHHHHHHHHHHHCGGGEEEEEE
T ss_pred HHHHh-cCCCEEEECcH-HHhhcCCCCHHHHHHHHHHhCcCcEEEEEE
Confidence 46778 99999998776 444448999999999999998777654443
No 337
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=59.77 E-value=42 Score=30.29 Aligned_cols=108 Identities=8% Similarity=0.040 Sum_probs=66.2
Q ss_pred CCceeEecCCCCCCcchhHHHH---HHHhhc-ccccEEEeeCcccccCChhHHH-HHHHHHHhC-Ccee--cCC---cHH
Q 022296 24 FGVTEMRSPHYTLSSSHNVLED---IFESMG-QFVDGLKFSGGSHSLMPKPFIE-EVVKRAHQH-DVYV--STG---DWA 92 (299)
Q Consensus 24 ~GlT~V~DkGl~~~~g~~~l~D---lLe~ag-~yID~lKfg~GTs~l~p~~~l~-eKI~l~~~~-gV~v--~~G---tlf 92 (299)
+|.-+++-+|.+.. +....+ ++.+.| +.|=.+.=|+-|..=||.+.+. .-+..+++. |++| ++. |.-
T Consensus 129 ~~kPV~lk~G~~~t--~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~ 206 (262)
T 1zco_A 129 VENPVLLKRGMGNT--IQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRR 206 (262)
T ss_dssp SSSCEEEECCTTCC--HHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSG
T ss_pred cCCcEEEecCCCCC--HHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCcc
Confidence 57789999998422 222222 223334 4666666554454455666444 444455544 7765 331 211
Q ss_pred HHHHHhCCchHHHHHHHHHHcCCC--EEE--------ecCCcccCChhHHHHHHHHHHH
Q 022296 93 EHLIRNGPSAFKEYVEDCKQVGFD--TIE--------LNVGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 93 E~a~~qg~~~~~~yl~~~k~lGF~--~IE--------ISdGti~i~~~~r~~lI~~~~~ 141 (299)
+ -+..-...+..+|.+ .|| +|||..+|++++..++++.+++
T Consensus 207 ~--------~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 207 S--------LVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp G--------GHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred c--------hHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 1 122223346789999 999 5599999999999999999886
No 338
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=59.70 E-value=12 Score=34.72 Aligned_cols=68 Identities=19% Similarity=0.153 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCceec---CCcHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCc
Q 022296 71 FIEEVVKRAHQHDVYVS---TGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (299)
Q Consensus 71 ~l~eKI~l~~~~gV~v~---~GtlfE~a~~qg-~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~ 145 (299)
.+++-|++.|+.|-.+. |+..- .+ ...-++.+++.++.|++.||+..+.- +.+++.++.+.+++.||.
T Consensus 184 ~~~eaI~~I~~aGGvaVLAHP~r~~-----~~r~~~~~~~l~~l~~~GldgIEv~~~~~--~~~~~~~~~~lA~~~gL~ 255 (301)
T 3o0f_A 184 STHEVIAAVKGAGGVVVAAHAGDPQ-----RNRRLLSDEQLDAMIADGLDGLEVWHRGN--PPEQRERLLTIAARHDLL 255 (301)
T ss_dssp BHHHHHHHHHHTTCEEEECSTTCTT-----TCSSCCCHHHHHHHHHHTCCEEEEESTTS--CHHHHHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHCCCEEEecChhhhc-----cccccCcHHHHHHHHHCCCCEEEEeCCCC--CHHHHHHHHHHHHHcCCc
Confidence 48899999999996333 43220 01 11335678889999999999998654 788888999999999886
No 339
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=59.63 E-value=57 Score=30.53 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=63.8
Q ss_pred ccccEEEeeCcc--cccCChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhC----------------CchHHH
Q 022296 52 QFVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNG----------------PSAFKE 105 (299)
Q Consensus 52 ~yID~lKfg~GT--s~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a----~~qg----------------~~~~~~ 105 (299)
.-++.+|+.... ....+.+.+++.++.++++|+.+.. . .+.+.. ...| ...+.+
T Consensus 144 ~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~ 223 (461)
T 3sfw_A 144 EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGR 223 (461)
T ss_dssp SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHH
Confidence 345677765432 1356778899999999999997764 2 343321 1112 124667
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+..++..|... -| ..++..+-.++|+.+++.|+.|..|...
T Consensus 224 ~~~la~~~g~~~-hi----~H~s~~~~l~~i~~ak~~G~~vt~e~~p 265 (461)
T 3sfw_A 224 AIALTALADAQL-YV----VHVSCADAVRRIAEAREKGWNVYGETCP 265 (461)
T ss_dssp HHHHHHHTTCEE-EE----CSCCSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred HHHHHHHhCCCE-EE----EecCcHHHHHHHHHHHhcCCcEEEeecc
Confidence 778888888764 22 2344577789999999999998777755
No 340
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=59.60 E-value=12 Score=35.46 Aligned_cols=46 Identities=20% Similarity=0.368 Sum_probs=35.8
Q ss_pred HHHHHHcCCCEEEecC-----------Ccc--------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV-----------GSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd-----------Gti--------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++++++|||++|+++= |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 34 Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 34 IPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp HHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 5677999999999962 211 13 3789999999999999999877644
No 341
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=59.60 E-value=13 Score=37.13 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=37.5
Q ss_pred HHHHHHHHHcCCCEEEecC----------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 104 KEYVEDCKQVGFDTIELNV----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEISd----------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++.+.++++|||++|+++- |.- .+ +.++..++|+.+.++|++|+-.+-.
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~ 227 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVP 227 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3345888999999999962 211 11 2588999999999999999887755
No 342
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=59.50 E-value=1e+02 Score=27.97 Aligned_cols=92 Identities=11% Similarity=0.071 Sum_probs=54.7
Q ss_pred ccEEEeeCccc-----ccCChhHHHHHHHHHHhCCceecC---C-cHHHHH----HHhCC----------------chHH
Q 022296 54 VDGLKFSGGSH-----SLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNGP----------------SAFK 104 (299)
Q Consensus 54 ID~lKfg~GTs-----~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE~a----~~qg~----------------~~~~ 104 (299)
++.+|++.+.+ ...+.+.+++-++.++++|.++.. . ...+.+ ...|. ..++
T Consensus 143 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~ 222 (458)
T 1gkr_A 143 AVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQ 222 (458)
T ss_dssp CCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHH
T ss_pred CcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHH
Confidence 66788765433 245778899999999999987653 2 233322 23331 1234
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 022296 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
+.++.+++.|... -+. .++...=.++|+.+++.|+.+..|+
T Consensus 223 ~~~~la~~~g~~~-h~~----H~~~~~~~~~i~~~~~~G~~v~~~~ 263 (458)
T 1gkr_A 223 RALLLQKEAGCRL-IVL----HVSNPDGVELIHQAQSEGQDVHCES 263 (458)
T ss_dssp HHHHHHHHHCCEE-EEC----CCCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhCCCE-EEE----eCCCHHHHHHHHHHHHCCCcEEEEE
Confidence 5666778888752 121 1222233467777888887665554
No 343
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=59.44 E-value=12 Score=33.23 Aligned_cols=41 Identities=17% Similarity=0.336 Sum_probs=33.0
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 244 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli 244 (299)
++.+++.|++||++|++-+.-+ -+.+++.++++.+|.++++
T Consensus 87 ~e~~~~~l~~GadkVii~t~a~------~~p~li~e~~~~~g~q~iv 127 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMAI------KDATLCLEILKEFGSEAIV 127 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTTT------TCHHHHHHHHHHHCTTTEE
T ss_pred HHHHHHHHHcCCCEEEEccccc------cCCchHHHHHhcccCceEE
Confidence 6777999999999999977522 2477888888888877766
No 344
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=59.36 E-value=51 Score=29.28 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=61.9
Q ss_pred HHHHHHHhhccc-ccEEEeeCc-----c-cccCCh----hHHHHHHHHHHhCCceecC-C-cH-H--------HHHHHhC
Q 022296 42 VLEDIFESMGQF-VDGLKFSGG-----S-HSLMPK----PFIEEVVKRAHQHDVYVST-G-DW-A--------EHLIRNG 99 (299)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~G-----T-s~l~p~----~~l~eKI~l~~~~gV~v~~-G-tl-f--------E~a~~qg 99 (299)
.+++.|+.+.+. .|.+=+... . .-..|. +.+++.-++++++|+.++. . .+ + |.. .
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~-~-- 113 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKF-D-- 113 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHH-H--
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHH-H--
Confidence 356666666554 566666532 0 112121 2578888899999997653 2 22 1 222 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHcCCcccce
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLKAKPK 149 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~-------~lI~~~~~~G~~v~~E 149 (299)
+.+++.++.|+++|.+.|=+....-..+.+.+. ++.+.+++.|+++.-|
T Consensus 114 -~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 169 (305)
T 3obe_A 114 -EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYH 169 (305)
T ss_dssp -HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred -HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 268999999999999999985322223444443 4445666777775443
No 345
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=59.31 E-value=9.7 Score=31.16 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=50.9
Q ss_pred ccccEEEeeCccc--ccC------ChhHHHHHHHHHHhCCceecCCc-HHHHHHHhCCchHHHHHHHHHHc-CC-CEEEe
Q 022296 52 QFVDGLKFSGGSH--SLM------PKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQV-GF-DTIEL 120 (299)
Q Consensus 52 ~yID~lKfg~GTs--~l~------p~~~l~eKI~l~~~~gV~v~~Gt-lfE~a~~qg~~~~~~yl~~~k~l-GF-~~IEI 120 (299)
+++|.+-++.=+. ..+ +-+.+.+-|+.++++|+.+..-+ +..-. ..+.+.+++..+.++++ |+ ..+.+
T Consensus 53 ~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~~g~~v~i~~~v~~~~-n~n~~~~~~~~~~~~~~~g~~~~~~l 131 (182)
T 3can_A 53 RNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAEADFPYYIRIPLIEGV-NADEKNIKLSAEFLASLPRHPEIINL 131 (182)
T ss_dssp HTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHHTTCCEEEEEEECBTT-TCSHHHHHHHHHHHHHSSSCCSEEEE
T ss_pred hhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCeEEEEEEEECCC-CCCHHHHHHHHHHHHhCcCccceEEE
Confidence 4477776664332 110 11456667777777776443221 11000 01223577788888888 88 77776
Q ss_pred cC----Cc---------------ccCChhH--HHHHHHHHHHcCCccc
Q 022296 121 NV----GS---------------LEIPEET--LLRYVRLVKSAGLKAK 147 (299)
Q Consensus 121 Sd----Gt---------------i~i~~~~--r~~lI~~~~~~G~~v~ 147 (299)
.. |. -..+.++ ..++.+.+++.|+.+.
T Consensus 132 ~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~ 179 (182)
T 3can_A 132 LPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKAT 179 (182)
T ss_dssp EECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEE
T ss_pred ecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceE
Confidence 42 11 1223444 5677777888777643
No 346
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=59.27 E-value=15 Score=33.17 Aligned_cols=136 Identities=10% Similarity=0.099 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG---ti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.++++++++-+- .+.|=+.-. +..|+.++|.++++.+.+ ++.-=+|+ .+
T Consensus 20 ~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGv---g~--------------------- 71 (283)
T 2pcq_A 20 AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGL---ME--------------------- 71 (283)
T ss_dssp HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEE---CC---------------------
T ss_pred HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeC---CC---------------------
Confidence 466677777776 777665433 337888888888888776 22222344 11
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc---------c---------------cccC---CC-cccHHH
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD---------D---------------VCKH---AD-SLRADI 230 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar---------g---------------i~d~---~G-~~r~d~ 230 (299)
.+..+. |+.++..-++|||.|++=.- | ||+. .| ++..+.
T Consensus 72 ----------~~t~~a---i~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P~~tg~~l~~~~ 138 (283)
T 2pcq_A 72 ----------ETLPQA---EGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVPQNTKVDLPLEA 138 (283)
T ss_dssp ----------SSHHHH---HHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECHHHHCCCCCHHH
T ss_pred ----------CCHHHH---HHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHH
Confidence 013445 77778888888888887442 1 3442 12 455666
Q ss_pred HHHHHhccCCCceEE--ec-CCchhHHHHHHHhCCCcccccCCCCchhhhhhhccc
Q 022296 231 IAKVIGRLGLEKTMF--EA-TNPRTSEWFIRRYGPKVNLFVDHSQVMDLECLRGRN 283 (299)
Q Consensus 231 i~~ii~~l~~eklif--EA-P~k~qQ~~fI~~fG~~VNLgI~~~eVi~LE~LR~~~ 283 (299)
+.++++ ..+|+- |+ .+-.+...+++ .+++..+.- -+|-+.+++|..|-
T Consensus 139 ~~~La~---~pnivgiKdssgd~~~~~~~~~-~~~~f~v~~-G~d~~~~~~l~~G~ 189 (283)
T 2pcq_A 139 VEALAP---HPNVLGIKDSSGDLSRIAFYQA-RLQEFRVYT-GHAPTFLGALALGA 189 (283)
T ss_dssp HHHHTT---STTEEEEEECSCCHHHHHHHHH-HCSSCEEEE-CCGGGHHHHHHTTC
T ss_pred HHHHhc---CCCEEEEEECCCCHHHHHHHHh-cCCCEEEEE-CcHHHHHHHHHcCC
Confidence 666653 344432 44 34455555666 666555532 23344577777553
No 347
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=59.24 E-value=32 Score=30.59 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=17.1
Q ss_pred HHHHHHHHHccCcEEEEeccccccC
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCKH 222 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d~ 222 (299)
-++++..+++|||-||+=+- |++.
T Consensus 217 ~e~~~~~~~agAD~vVVGSa-i~~~ 240 (268)
T 1qop_A 217 PEQVSAAVRAGAAGAISGSA-IVKI 240 (268)
T ss_dssp HHHHHHHHHTTCSEEEECHH-HHHH
T ss_pred HHHHHHHHHcCCCEEEEChH-Hhhh
Confidence 34558889999999998543 4433
No 348
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=59.15 E-value=38 Score=32.66 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
.+.+.++++.+.|++.|+++...- ......+.|+.+++.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKAD 275 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHH
Confidence 456788899999999999954432 223445778888775
No 349
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=58.81 E-value=6.4 Score=35.78 Aligned_cols=91 Identities=11% Similarity=0.144 Sum_probs=60.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
......++++..++|++++|+|.--..-+..+ -++.++++|..+..- =+..+ |+-+..|.+.+.++|.|.
T Consensus 38 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~----~v~~Lk~~g~~VflDlK~~DI-----pnTv~~a~~~~~~~gaD~ 108 (255)
T 3ldv_A 38 NLADALAFVDKIDPSTCRLKVGKEMFTLFGPD----FVRELHKRGFSVFLDLKFHDI-----PNTCSKAVKAAAELGVWM 108 (255)
T ss_dssp SHHHHHHHHTTSCGGGCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEEEECSC-----HHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhCCcCcEEEeCHHHHHhhCHH----HHHHHHhcCCCEEEEEecccc-----hhHHHHHHHHHHhcCCCE
Confidence 67788999999999999999997544333333 445556667666542 12111 234566777888999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~ 141 (299)
|-|+- ....+....+++.+++
T Consensus 109 vTVh~---~~G~~~~~~a~~~~~~ 129 (255)
T 3ldv_A 109 VNVHA---SGGERMMAASREILEP 129 (255)
T ss_dssp EEEEG---GGCHHHHHHHHHHHGG
T ss_pred EEEec---cCCHHHHHHHHHHHhh
Confidence 99964 3345555566666554
No 350
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=58.58 E-value=24 Score=30.15 Aligned_cols=39 Identities=18% Similarity=0.337 Sum_probs=27.5
Q ss_pred HHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceE
Q 022296 199 RRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTM 244 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ekli 244 (299)
++++..+++||+.|++=+.-+.+ .+.+.++++.+| ++++
T Consensus 87 ~~~~~~l~~Gad~V~lg~~~l~~------p~~~~~~~~~~g-~~~~ 125 (244)
T 2y88_A 87 ESLAAALATGCARVNVGTAALEN------PQWCARVIGEHG-DQVA 125 (244)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHC------HHHHHHHHHHHG-GGEE
T ss_pred HHHHHHHHcCCCEEEECchHhhC------hHHHHHHHHHcC-CCEE
Confidence 44688899999999986653322 467788887777 4444
No 351
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=58.56 E-value=25 Score=32.66 Aligned_cols=41 Identities=20% Similarity=0.326 Sum_probs=30.7
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP 248 (299)
+++++..++||||.|+++ |+..+.+.++++.+. .++..||.
T Consensus 208 l~ea~eAl~aGaD~I~LD---------n~~~~~l~~av~~~~-~~v~ieaS 248 (287)
T 3tqv_A 208 LDELNQAIAAKADIVMLD---------NFSGEDIDIAVSIAR-GKVALEVS 248 (287)
T ss_dssp HHHHHHHHHTTCSEEEEE---------SCCHHHHHHHHHHHT-TTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc---------CCCHHHHHHHHHhhc-CCceEEEE
Confidence 456688899999999994 456677888877665 46777775
No 352
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=58.47 E-value=37 Score=28.52 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=17.3
Q ss_pred HHHHHHHHccCcEEEEeccccccCC
Q 022296 199 RRAERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d~~ 223 (299)
+.+.+.+++||+-|++ ++.++.+.
T Consensus 211 ~~~~~~~~~Ga~~v~v-gsal~~~~ 234 (253)
T 1h5y_A 211 EHFYEAAAAGADAVLA-ASLFHFRV 234 (253)
T ss_dssp HHHHHHHHTTCSEEEE-SHHHHTTS
T ss_pred HHHHHHHHcCCcHHHH-HHHHHcCC
Confidence 3346677899999998 45677654
No 353
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=58.35 E-value=83 Score=26.68 Aligned_cols=59 Identities=15% Similarity=0.291 Sum_probs=40.1
Q ss_pred ChhHHHHHHHHHHhCCcee---cC-CcHH-------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc
Q 022296 68 PKPFIEEVVKRAHQHDVYV---ST-GDWA-------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (299)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v---~~-Gtlf-------E~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~ 126 (299)
+++.+++.-++++++|+.+ +. +.+. +....+.-+.+++.++.|+++|.+.|=+.-|...
T Consensus 45 ~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~ 114 (285)
T 1qtw_A 45 TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHL 114 (285)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCT
T ss_pred CHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCC
Confidence 3466888899999999983 33 2221 1111111126888999999999999988777653
No 354
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=58.30 E-value=12 Score=37.29 Aligned_cols=48 Identities=13% Similarity=0.177 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEecCCcc-----------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 105 EYVEDCKQVGFDTIELNVGSL-----------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdGti-----------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+=|+++++|||++|.+|-=+- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 152 ~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 221 (601)
T 3edf_A 152 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVL 221 (601)
T ss_dssp HTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 336788999999999873221 11 3578999999999999999877755
No 355
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=58.17 E-value=24 Score=33.37 Aligned_cols=24 Identities=8% Similarity=-0.039 Sum_probs=18.3
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEecc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEar 217 (299)
.++. ++.++..-++|+++|-+=++
T Consensus 255 ~~~~---~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 255 TALG---LYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp HHHH---HHHHHHHGGGCCSEEEEECC
T ss_pred HHHH---HHHHHHHHHcCCCEEEEcCC
Confidence 4556 77788888899999987554
No 356
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=58.08 E-value=89 Score=26.71 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=15.9
Q ss_pred HHHHHHHHccCcEEEEecccccc
Q 022296 199 RRAERCLEAGADMIMIDSDDVCK 221 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEargi~d 221 (299)
+.++..+++||+-|++=+. ||+
T Consensus 204 e~i~~~~~~Gad~vivGsa-i~~ 225 (248)
T 1geq_A 204 EHVVSLLKEGANGVVVGSA-LVK 225 (248)
T ss_dssp HHHHHHHHTTCSEEEECHH-HHH
T ss_pred HHHHHHHHcCCCEEEEcHH-HHh
Confidence 4457778999999998543 444
No 357
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=57.80 E-value=9 Score=34.69 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=60.8
Q ss_pred ceeEecCCCCCCcc-hhHHHHHHHhhcccccEEEeeCcccccCChh---HHHHHHHHHHhCCceecCC-cHHHHHHHhCC
Q 022296 26 VTEMRSPHYTLSSS-HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP---FIEEVVKRAHQHDVYVSTG-DWAEHLIRNGP 100 (299)
Q Consensus 26 lT~V~DkGl~~~~g-~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~---~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~ 100 (299)
|-.=+||.....+. .+....+++..++|++++|.|..-..-+..+ .|++.++.++ +|..|..- =+..+ |
T Consensus 16 LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~-~g~~VflDlK~~DI-----~ 89 (255)
T 3qw3_A 16 LCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVP-AGIPVVLDAKRGDI-----A 89 (255)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSC-TTCCBEEEEEECCC-----H
T ss_pred EEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhc-CCCeEEEEeecCCc-----H
Confidence 55557877533212 3578999999999999999998777666654 5666666543 67666542 12111 2
Q ss_pred chHHHHHHHH-HHcCCCEEEecC
Q 022296 101 SAFKEYVEDC-KQVGFDTIELNV 122 (299)
Q Consensus 101 ~~~~~yl~~~-k~lGF~~IEISd 122 (299)
+-+..|.+.+ +++|+|+|-|+-
T Consensus 90 nTv~~~a~~~~~~lg~d~vTvh~ 112 (255)
T 3qw3_A 90 DTADAYATSAFKHLNAHAITASP 112 (255)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc
Confidence 3456677776 479999999964
No 358
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=57.64 E-value=6 Score=33.13 Aligned_cols=105 Identities=11% Similarity=0.182 Sum_probs=48.4
Q ss_pred CCCCCcchhHHHHHHHhhcccccEEEeeCcccccC--ChhHHHHHHHHHHhCC-ceecC-C-c--HHHHHHHhCCchHHH
Q 022296 33 HYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQHD-VYVST-G-D--WAEHLIRNGPSAFKE 105 (299)
Q Consensus 33 Gl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~--p~~~l~eKI~l~~~~g-V~v~~-G-t--lfE~a~~qg~~~~~~ 105 (299)
|=++. -+..+.++++.+-++ .+++.+-|.... ..+.+++..+. .+ |.++. | + ..+..-..+.+++-+
T Consensus 78 GEP~l-~~~~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~---~~~v~isld~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3c8f_A 78 GEAIL-QAEFVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV---TDLVMLDLKQMNDEIHQNLVGVSNHRTLE 151 (245)
T ss_dssp SCGGG-GHHHHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT---CSEEEEECCCSSHHHHHHHHSSCSHHHHH
T ss_pred CCcCC-CHHHHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh---CCEEEEeCCCCCHHHhhhccCCCHHHHHH
Confidence 44433 444466777766654 235555554333 33444443332 22 34444 2 2 122211111234555
Q ss_pred HHHHHHHcCCCEEEecCCcc---cCChhHHHHHHHHHHHcCC
Q 022296 106 YVEDCKQVGFDTIELNVGSL---EIPEETLLRYVRLVKSAGL 144 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---~i~~~~r~~lI~~~~~~G~ 144 (299)
-++.+++.|+. +.++--.+ .-+.++..++++.+++.|.
T Consensus 152 ~i~~l~~~g~~-v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 152 FAKYLANKNVK-VWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHTCC-EEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCE-EEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 56666677774 22321111 1123666677777777663
No 359
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=57.61 E-value=24 Score=30.93 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=56.1
Q ss_pred HHHHHHHhhcc---cccE-EEeeCcccccCChhHHHHHHHHHHhCC-----ceecC-C-cHHHHHHHhCCch--------
Q 022296 42 VLEDIFESMGQ---FVDG-LKFSGGSHSLMPKPFIEEVVKRAHQHD-----VYVST-G-DWAEHLIRNGPSA-------- 102 (299)
Q Consensus 42 ~l~DlLe~ag~---yID~-lKfg~GTs~l~p~~~l~eKI~l~~~~g-----V~v~~-G-tlfE~a~~qg~~~-------- 102 (299)
.|+++|+.+.. .+.+ +|-.-+. .+...+...++.++++ |.++. - ..+..+-...|+-
T Consensus 99 tL~evl~~~~~~~~~l~iEiK~~~~~----~~~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~ 174 (252)
T 3qvq_A 99 TLLEAIEVISQYGMGLNLELKPCEGL----EEETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSA 174 (252)
T ss_dssp BHHHHHHHHHHTTCEEEEEECCCTTC----HHHHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSS
T ss_pred CHHHHHHHHhccCcEEEEEecCCCCc----cHHHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEec
Confidence 78888887642 2222 5632221 1222233345555544 33333 2 3455554444321
Q ss_pred -HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 103 -FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 103 -~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
-.++.+.++.+|++.+.++...++ .++|+.+++.|++|.+
T Consensus 175 ~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~ 215 (252)
T 3qvq_A 175 IPSAWQERLEHLDCAGLHIHQSFFD------VQQVSDIKAAGYKVLA 215 (252)
T ss_dssp CCTTHHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE
T ss_pred CchhHHHHHHHcCCeEEecchhhCC------HHHHHHHHHCCCEEEE
Confidence 145677889999999988765443 3689999999888654
No 360
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=57.37 E-value=45 Score=28.87 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHhCCce--ecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc--------cCCh---hHHHHH
Q 022296 69 KPFIEEVVKRAHQHDVY--VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL--------EIPE---ETLLRY 135 (299)
Q Consensus 69 ~~~l~eKI~l~~~~gV~--v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti--------~i~~---~~r~~l 135 (299)
.+.++++++.++++|+. ++-|+--|. +.+.++|.+.|=+..-.. +.+. ++-.++
T Consensus 97 ~~e~~~~~~~a~~~Gl~~iv~v~~~~e~-------------~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ 163 (219)
T 2h6r_A 97 LADIEAVINKCKNLGLETIVCTNNINTS-------------KAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRA 163 (219)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESSSHHH-------------HHHTTTCCSEEEECCCC--------------CSHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCchHH-------------HHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHH
Confidence 34599999999999993 344754443 223445666766654331 2222 344455
Q ss_pred HHHHHHcCCcccceeeee
Q 022296 136 VRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 136 I~~~~~~G~~v~~E~gvK 153 (299)
|+...+ +..+..++|++
T Consensus 164 ir~~~~-~~~ii~ggGI~ 180 (219)
T 2h6r_A 164 VKEINK-DVKVLCGAGIS 180 (219)
T ss_dssp HHHHCT-TCEEEECSSCC
T ss_pred HHhccC-CCeEEEEeCcC
Confidence 555432 56677777773
No 361
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=57.31 E-value=14 Score=32.98 Aligned_cols=46 Identities=26% Similarity=0.221 Sum_probs=41.0
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+++++|.++|-+-----.+...+-.+.++.+.+.||.++-|+|=
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge 123 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPD 123 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999987776677777889999999999999999886
No 362
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=57.24 E-value=33 Score=32.89 Aligned_cols=40 Identities=15% Similarity=0.157 Sum_probs=34.6
Q ss_pred HHHHHHHHccCcEEEEec-----cccccCCCcccHHHHHHHHhcc
Q 022296 199 RRAERCLEAGADMIMIDS-----DDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 199 ~~~~~dLeAGA~~VIiEa-----rgi~d~~G~~r~d~i~~ii~~l 238 (299)
..+...+.+||+-+|||- +.++|..-.+..+.+.++++.+
T Consensus 330 ~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i 374 (385)
T 3nvt_A 330 PCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAI 374 (385)
T ss_dssp HHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHH
Confidence 456889999999999998 3679999999999999998765
No 363
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=57.09 E-value=40 Score=30.79 Aligned_cols=138 Identities=20% Similarity=0.173 Sum_probs=77.2
Q ss_pred cccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcH---HHHHHHhCCchHHHHHHHHHHcCCCEEEecC-Cccc
Q 022296 51 GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDW---AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV-GSLE 126 (299)
Q Consensus 51 g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~Gtl---fE~a~~qg~~~~~~yl~~~k~lGF~~IEISd-Gti~ 126 (299)
.+|+|++|+|-++. .+.+ |.+.+.- ..-=|.+++|+. -|.. .-++.++.-|-+.|=+=. |+-+
T Consensus 119 ~~~vd~~kIgs~~~--~n~~-ll~~~a~-~~kPV~lk~G~~~t~~ei~---------~Ave~i~~~Gn~~i~L~~Rg~~~ 185 (276)
T 1vs1_A 119 SRYADMLQIGARNM--QNFP-LLREVGR-SGKPVLLKRGFGNTVEELL---------AAAEYILLEGNWQVVLVERGIRT 185 (276)
T ss_dssp HHHCSEEEECGGGT--TCHH-HHHHHHH-HTCCEEEECCTTCCHHHHH---------HHHHHHHHTTCCCEEEEECCBCC
T ss_pred HHhCCeEEECcccc--cCHH-HHHHHHc-cCCeEEEcCCCCCCHHHHH---------HHHHHHHHcCCCeEEEEeCCcCC
Confidence 45689999986654 3433 4444441 233345566753 3332 233445667874444433 5543
Q ss_pred CC----hhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHH
Q 022296 127 IP----EETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRA 201 (299)
Q Consensus 127 i~----~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 201 (299)
-| ++--++.|..+++. |+. ++.- .....|. -+.. ..-+
T Consensus 186 yp~y~~~~vdl~~i~~lk~~~~lp----Vi~d-ssH~~g~-----------------------------~~~~---~~~~ 228 (276)
T 1vs1_A 186 FEPSTRFTLDVAAVAVLKEATHLP----VIVD-PSHPAGR-----------------------------RSLV---PALA 228 (276)
T ss_dssp SCCSSSSBCBHHHHHHHHHHBSSC----EEEC-CHHHHCS-----------------------------GGGH---HHHH
T ss_pred CCCcCcchhCHHHHHHHHHHhCCC----EEEe-CCCCCCc-----------------------------cchH---HHHH
Confidence 32 22234556677773 432 3220 0000000 0111 3334
Q ss_pred HHHHHccCcEEEEecc-----ccccCCCcccHHHHHHHHhcc
Q 022296 202 ERCLEAGADMIMIDSD-----DVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 202 ~~dLeAGA~~VIiEar-----gi~d~~G~~r~d~i~~ii~~l 238 (299)
...+.+||+=||||.- -+.|..-++..+.+.++++.+
T Consensus 229 ~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i 270 (276)
T 1vs1_A 229 KAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGEL 270 (276)
T ss_dssp HHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHH
Confidence 5568899999999984 567888899999999998754
No 364
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=57.06 E-value=44 Score=29.26 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=15.7
Q ss_pred HHHHHHHHHccCcEEEEecc
Q 022296 198 SRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar 217 (299)
.+++...+++|||-|++=+.
T Consensus 213 ~e~~~~~~~~GAdgvvVGSa 232 (262)
T 1rd5_A 213 PEHVKQIAQWGADGVIIGSA 232 (262)
T ss_dssp HHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEChH
Confidence 34558889999999998654
No 365
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=57.03 E-value=18 Score=30.95 Aligned_cols=39 Identities=23% Similarity=0.246 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcc-c-CChhHHHHHHHHHHHc
Q 022296 102 AFKEYVEDCKQVGFDTIELN--VGSL-E-IPEETLLRYVRLVKSA 142 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEIS--dGti-~-i~~~~r~~lI~~~~~~ 142 (299)
.+.+-++.+.+.|.++||+- ||.. . ++ .-.+.++.+++.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~ 66 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPI 66 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGG
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhc
Confidence 56778889999999999996 5532 1 22 224667776663
No 366
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=56.98 E-value=12 Score=34.07 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCc----hHHHHHHHHHHcCCCEEEec
Q 022296 69 KPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPS----AFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 69 ~~~l~eKI~l~~~~gV~v~~--GtlfE~a~~qg~~----~~~~yl~~~k~lGF~~IEIS 121 (299)
...+++.|..+|+.|++|.. |||--... ..+. -++.+.+.+++.|||.|.|.
T Consensus 82 ~~~~~~~i~~~~~~g~kvllSiGG~~~~~~-~~~~~r~~F~~s~~~~l~~ygfDGiDiD 139 (328)
T 4axn_A 82 DTEFRRQVGVLNSQGRAVLISLGGADAHIE-LKTGDEDKLKDEIIRLVEVYGFDGLDID 139 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEETTCCCC-CCTTCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCcc-CChHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 45689999999999997754 77631111 1111 26677788999999999884
No 367
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=56.97 E-value=21 Score=30.03 Aligned_cols=42 Identities=7% Similarity=0.116 Sum_probs=27.4
Q ss_pred chHHHHHHHHHHcCCCEEEecC--CcccCChhHHHHHHHHHHHc
Q 022296 101 SAFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~lI~~~~~~ 142 (299)
..+.+-++.+.+.|.+++++-. |+.......=.+.++.+++.
T Consensus 16 ~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~ 59 (220)
T 2fli_A 16 ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59 (220)
T ss_dssp GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh
Confidence 3677888999999999977754 76333211113567766664
No 368
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=56.95 E-value=54 Score=31.53 Aligned_cols=95 Identities=11% Similarity=0.110 Sum_probs=59.8
Q ss_pred ccEEEe--eCcccccCChhHHHHHHHHHHhCCceecC---C-cHHH----HHHHhCC----------------chHHHHH
Q 022296 54 VDGLKF--SGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAE----HLIRNGP----------------SAFKEYV 107 (299)
Q Consensus 54 ID~lKf--g~GTs~l~p~~~l~eKI~l~~~~gV~v~~---G-tlfE----~a~~qg~----------------~~~~~yl 107 (299)
+..+|+ ++......+.+.+++.++.++++|+.+.. . .+.+ .+...|. ..+..-+
T Consensus 143 ~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i 222 (490)
T 3dc8_A 143 INTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAI 222 (490)
T ss_dssp CCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHH
Confidence 445564 23333445677788888888888876653 2 2322 1111111 1355667
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeee
Q 022296 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVM 153 (299)
Q Consensus 108 ~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK 153 (299)
..++..|... -| .-++..+-.++|+.+++.|+.|..|+...
T Consensus 223 ~la~~~g~~l-hi----~HvSt~~~~~li~~ak~~G~~Vt~e~~ph 263 (490)
T 3dc8_A 223 MIADMAGCPV-YI----VHTSCEQAHEAIRRARAKGMRVFGEPLIQ 263 (490)
T ss_dssp HHHHHHTCCE-EE----SSCCSHHHHHHHHHHHHTTCCEEECCBHH
T ss_pred HHHHHhCCcE-EE----EeCCCHHHHHHHHHHHHCCCeEEEEEchH
Confidence 7788888653 22 33566888899999999999999888653
No 369
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=56.89 E-value=10 Score=33.76 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=38.0
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc------------c--------cCC-----hhHHHHHHHHHHHcCCcccceeee
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGS------------L--------EIP-----EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt------------i--------~i~-----~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+++.++.+|++||++|-+.--. + .+. .+...++|+.++++|++|.-++..
T Consensus 36 ~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 36 ADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 468889999999999999884110 0 111 334457999999999999988764
No 370
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=56.79 E-value=7.6 Score=36.19 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=39.2
Q ss_pred ccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 022296 65 SLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (299)
Q Consensus 65 ~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti 125 (299)
..-..+.|++.|+.++++||.||. |+ + --.+-++.++++|.++||+-.|..
T Consensus 137 v~~~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qI~aA~~~GAd~IELhTG~Y 187 (278)
T 3gk0_A 137 VVGHFDAVRAACKQLADAGVRVSL--FI------D--PDEAQIRAAHETGAPVIELHTGRY 187 (278)
T ss_dssp TTTTHHHHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHHTCSEEEECCHHH
T ss_pred hhccHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCcCEEEEecchh
Confidence 345677899999999999999985 11 2 123457889999999999988744
No 371
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=56.76 E-value=6.6 Score=37.66 Aligned_cols=51 Identities=16% Similarity=0.184 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-.++-++++++|||++|++|==+- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 24 i~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 24 IADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp HHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445556888999999999972111 11 2578999999999999999887755
No 372
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=56.72 E-value=29 Score=31.58 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=64.9
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcc-------------cCChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCcccc
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNVGSL-------------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDR 165 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISdGti-------------~i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~ 165 (299)
|+.+.+..+.+++. ||.|||+-|+= .=..+.-.++|+.+++. |+ -+++|... |
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~----pv~vKir~---G----- 136 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSG----KFSVKTRL---G----- 136 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSS----EEEEEEES---C-----
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCC----CEEEEecC---C-----
Confidence 34677777788888 99999986532 22344455677777763 42 26666321 1
Q ss_pred cccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc---ccc------------------CCC
Q 022296 166 AFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD---VCK------------------HAD 224 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg---i~d------------------~~G 224 (299)
|. .++. ++.++...++|+++|++-++. -+. .+|
T Consensus 137 ----------~~-------------~~~~---~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~~ipVi~~G 190 (318)
T 1vhn_A 137 ----------WE-------------KNEV---EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKRIPTFVSG 190 (318)
T ss_dssp ----------SS-------------SCCH---HHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCCSSCEEEES
T ss_pred ----------CC-------------hHHH---HHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHcCCeEEEEC
Confidence 10 1112 355677789999999998751 111 134
Q ss_pred cc-cHHHHHHHHhccCCCceEEecC
Q 022296 225 SL-RADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 225 ~~-r~d~i~~ii~~l~~eklifEAP 248 (299)
.+ ..+.+.++++..+.+-+|+=-+
T Consensus 191 gI~s~~da~~~l~~~gad~V~iGR~ 215 (318)
T 1vhn_A 191 DIFTPEDAKRALEESGCDGLLVARG 215 (318)
T ss_dssp SCCSHHHHHHHHHHHCCSEEEESGG
T ss_pred CcCCHHHHHHHHHcCCCCEEEECHH
Confidence 44 3456666666556666665433
No 373
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=56.62 E-value=14 Score=34.86 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=54.2
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLF 182 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~ 182 (299)
+.++.+.+.+.|.++|++|.++.+-....-.++++.+++. +. +|=++. +
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~-~~-iPvi~~----------G------------------- 300 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREA-YQ-GVLIYA----------G------------------- 300 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-CC-SEEEEE----------S-------------------
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHH-CC-CcEEEe----------C-------------------
Confidence 4456777788899999999986421111112566666663 10 121222 0
Q ss_pred ccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 183 LASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
.++ .+.+++.|++| ||.|++ +|+++.+ .+++.++.+..++.
T Consensus 301 -----gi~-------~~~a~~~l~~g~aD~V~i-gR~~i~~-----P~l~~~~~~g~~l~ 342 (365)
T 2gou_A 301 -----RYN-------AEKAEQAINDGLADMIGF-GRPFIAN-----PDLPERLRHGYPLA 342 (365)
T ss_dssp -----SCC-------HHHHHHHHHTTSCSEEEC-CHHHHHC-----TTHHHHHHHTCCCC
T ss_pred -----CCC-------HHHHHHHHHCCCcceehh-cHHHHhC-----chHHHHHHcCCCCC
Confidence 111 34558899999 999998 6665532 56788887765543
No 374
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=56.56 E-value=39 Score=31.63 Aligned_cols=20 Identities=10% Similarity=0.137 Sum_probs=15.4
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEE
Q 022296 191 VGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
+++. ++.++..-++ +|+|-+
T Consensus 229 ~~~~---~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 229 IDMM---VEYINMIKDK-VDLIDV 248 (343)
T ss_dssp HHHH---HHHHHHHTTT-CSEEEE
T ss_pred HHHH---HHHHHHhhcc-ccEEec
Confidence 5666 7777777778 999888
No 375
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=56.54 E-value=11 Score=38.72 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=32.8
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---------ccCChhHHHHHHHHHHHcCCc
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGS---------LEIPEETLLRYVRLVKSAGLK 145 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGt---------i~i~~~~r~~lI~~~~~~G~~ 145 (299)
+..++|++.|.++||++|=|.+|= ...|..+..+|++.+++.|.+
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~ 362 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVG 362 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCE
Confidence 357888888888888888887773 223445667888888888765
No 376
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=56.49 E-value=84 Score=28.58 Aligned_cols=103 Identities=21% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCceeEecCCCCCCcchhHHHHHHHh------------------------------------------------------
Q 022296 24 FGVTEMRSPHYTLSSSHNVLEDIFES------------------------------------------------------ 49 (299)
Q Consensus 24 ~GlT~V~DkGl~~~~g~~~l~DlLe~------------------------------------------------------ 49 (299)
.|+|-|+|.|- ....+++.++.
T Consensus 100 ~GvTtv~d~~~----~~~~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (426)
T 2r8c_A 100 RGFTTVRDAGG----AGYPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVD 175 (426)
T ss_dssp TTEEEEEECSS----CCHHHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHH
T ss_pred CCeEEEEeCCC----chHHHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccCCHH
Q ss_pred ---------hcccccEEEeeCc----------ccccCChhHHHHHHHHHHhCCceecC--CcHHHHHHHhCCchHHHHHH
Q 022296 50 ---------MGQFVDGLKFSGG----------SHSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKEYVE 108 (299)
Q Consensus 50 ---------ag~yID~lKfg~G----------Ts~l~p~~~l~eKI~l~~~~gV~v~~--GtlfE~a~~qg~~~~~~yl~ 108 (299)
...-.|.+|+-.. ....++++.+++.++.||++|+++.. .+.-+ ++
T Consensus 176 ~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~-------------i~ 242 (426)
T 2r8c_A 176 EVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA-------------IA 242 (426)
T ss_dssp HHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHH-------------HH
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHH-------------HH
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCccccee
Q 022296 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 109 ~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
.+.+.|.+.||=..-.-+ +.++++++.|..+.|.+
T Consensus 243 ~al~~G~~~i~H~~~~~~-------~~~~~~~~~gv~~~pt~ 277 (426)
T 2r8c_A 243 RAVRCGVRTIEHGNLIDD-------ETARLVAEHGAYVVPTL 277 (426)
T ss_dssp HHHHTTCSEEEECTTCCH-------HHHHHHHHTTCEEECCT
T ss_pred HHHHcCCCEEecCCcCCH-------HHHHHHHHcCCeEeech
No 377
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=56.23 E-value=35 Score=28.91 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=41.2
Q ss_pred hhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022296 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (299)
...++++.+....-+|++-+--- - .+.+.+.+.++.+++.++.. +.+ ++ +++++.|.+.|.|.|-
T Consensus 29 ~~~l~~~~~~~~~G~~~v~lr~~--~-~~~~~~~~~~~~l~~~~~~~--~~l---~v-------~~~~~~a~~~gad~v~ 93 (221)
T 1yad_A 29 VEELARIIITIQNEVDFIHIRER--S-KSAADILKLLDLIFEGGIDK--RKL---VM-------NGRVDIALFSTIHRVQ 93 (221)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCT--T-SCHHHHHHHHHHHHHTTCCG--GGE---EE-------ESCHHHHHTTTCCEEE
T ss_pred cchHHHHHHHHHCCCCEEEEccC--C-CCHHHHHHHHHHHHHhcCcC--CeE---EE-------eChHHHHHHcCCCEEE
Confidence 34566655554445777755421 1 23444667777777766531 121 11 1356889999999999
Q ss_pred ecCCc
Q 022296 120 LNVGS 124 (299)
Q Consensus 120 ISdGt 124 (299)
+....
T Consensus 94 l~~~~ 98 (221)
T 1yad_A 94 LPSGS 98 (221)
T ss_dssp ECTTS
T ss_pred eCCCc
Confidence 97543
No 378
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=56.02 E-value=12 Score=36.82 Aligned_cols=46 Identities=22% Similarity=0.221 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++++++|||++|.+|- |.-. + +.++..++|+.++++|++|+-.+-.
T Consensus 37 ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (558)
T 1uok_A 37 LDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVV 101 (558)
T ss_dssp HHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5788999999999962 2211 2 3578999999999999999877755
No 379
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=55.99 E-value=15 Score=37.06 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=38.2
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.+-++++++|||++|+++- |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 108 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~ 178 (644)
T 3czg_A 108 VAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVL 178 (644)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44557888999999999962 211 12 2578999999999999999877644
No 380
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=55.95 E-value=12 Score=37.38 Aligned_cols=49 Identities=18% Similarity=0.191 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCCEEEecC---------------Ccc---------cCC---------hhHHHHHHHHHHHcCCcccce
Q 022296 103 FKEYVEDCKQVGFDTIELNV---------------GSL---------EIP---------EETLLRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd---------------Gti---------~i~---------~~~r~~lI~~~~~~G~~v~~E 149 (299)
+.+-+.++|+|||++|+++- |.- ... .++..++|+.+.++|++|+-.
T Consensus 122 ~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 122 MMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45568899999999999872 221 111 489999999999999999877
Q ss_pred ee
Q 022296 150 FA 151 (299)
Q Consensus 150 ~g 151 (299)
+-
T Consensus 202 ~V 203 (637)
T 1gjw_A 202 FI 203 (637)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 381
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=55.93 E-value=12 Score=37.74 Aligned_cols=45 Identities=27% Similarity=0.185 Sum_probs=35.0
Q ss_pred HHHHHHcCCCEEEecCCcc----------------------cC-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 107 VEDCKQVGFDTIELNVGSL----------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti----------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
|+++++|||++|.||==+- .+ +.++..++|+.++++|++|+-.+-
T Consensus 58 LdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 58 LPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp HHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 5678999999999973211 11 257899999999999999887663
No 382
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=55.58 E-value=11 Score=39.84 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCEEEecC----Cc------------------------ccCC------hhHHHHHHHHHHHcCCccccee
Q 022296 105 EYVEDCKQVGFDTIELNV----GS------------------------LEIP------EETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----Gt------------------------i~i~------~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
+-+.++|+|||++||++= .+ ..++ .++..++|+.+.++|++|+=.+
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 347888999999999871 11 1222 4899999999999999998877
Q ss_pred ee
Q 022296 151 AV 152 (299)
Q Consensus 151 gv 152 (299)
-.
T Consensus 553 V~ 554 (921)
T 2wan_A 553 VY 554 (921)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 383
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=55.50 E-value=11 Score=33.85 Aligned_cols=92 Identities=9% Similarity=0.062 Sum_probs=60.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~ 117 (299)
......++++..++|++++|+|.--..-+..+ -++.++++|..+..- =+..+ |+-+..|.+.+.++|.|.
T Consensus 19 ~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~~----~v~~L~~~g~~iflDlK~~DI-----~nTv~~~~~~~~~~gad~ 89 (239)
T 3tr2_A 19 TVEQARAQINPLTPELCHLKIGSILFTRYGPA----FVEELMQKGYRIFLDLKFYDI-----PQTVAGACRAVAELGVWM 89 (239)
T ss_dssp SHHHHHHHHTTCCTTTCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEEEECSC-----HHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhCCcccEEEeCHHHHHhhCHH----HHHHHHhcCCCEEEEeccccc-----chHHHHHHHHHHhCCCCE
Confidence 56788999999999999999997554333333 344456667665542 12111 234566778899999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHc
Q 022296 118 IELNVGSLEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~ 142 (299)
|-|.- ....+....+++.+++.
T Consensus 90 vTvh~---~~G~~~~~~a~~~~~~~ 111 (239)
T 3tr2_A 90 MNIHI---SGGRTMMETVVNALQSI 111 (239)
T ss_dssp EEEEG---GGCHHHHHHHHHHHHTC
T ss_pred EEEec---cCCHHHHHHHHHHHHhc
Confidence 99964 23455555566666553
No 384
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=55.47 E-value=13 Score=32.91 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=26.4
Q ss_pred HHHHHHHHcCCCEEEecCC----cccCChhHHHHHHHHHHHcCCcccceee
Q 022296 105 EYVEDCKQVGFDTIELNVG----SLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG----ti~i~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+.++.+|++||++|-|.-+ -...+.+...++|+.+.++|++|+-+++
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~~~Gi~Vild~h 86 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQNRLICMLEVH 86 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHTTCEEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3455566666666666432 1122344455666666677776666654
No 385
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=55.34 E-value=37 Score=31.80 Aligned_cols=41 Identities=24% Similarity=0.444 Sum_probs=32.6
Q ss_pred HHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccCCCceEEecC
Q 022296 198 SRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEKTMFEAT 248 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~~eklifEAP 248 (299)
+++++..++||||.||.+ |+..+.+.+.++.+. .++..||.
T Consensus 217 l~e~~eAl~aGaDiImLD---------n~s~~~l~~av~~~~-~~v~leaS 257 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLD---------NMSISEIKKAVDIVN-GKSVLEVS 257 (300)
T ss_dssp HHHHHHHHHTTCSEEEEE---------SCCHHHHHHHHHHHT-TSSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEC---------CCCHHHHHHHHHhhc-CceEEEEE
Confidence 466689999999999995 567788888887665 47788876
No 386
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=55.30 E-value=6.4 Score=34.30 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=51.9
Q ss_pred HHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHcCCcccc
Q 022296 78 RAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 78 l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~--~r~~lI~~~~~~G~~v~~ 148 (299)
+++++|| .+. .|--.++|+.+- ...+.++||+.+=++|.+-+.+.+ .....++.+++.|..+.+
T Consensus 148 ~L~~~gi~~l~i~G~~t~~CV~~T-------a~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 148 YLEKHHTDEVYIVGVALEYXVKAT-------AISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp HHHHTTCCEEEEEEECTTTHHHHH-------HHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred HHHhCCCCEEEEEEeccccHHHHH-------HHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 4577898 444 477788888885 334667999999999999999999 999999999999887643
No 387
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=55.23 E-value=12 Score=32.07 Aligned_cols=53 Identities=9% Similarity=0.090 Sum_probs=37.8
Q ss_pred CchHHHHHHHHHHcCCCEEEec---CCcc--------------------------------cCChhHHHHHHHHHHHcCC
Q 022296 100 PSAFKEYVEDCKQVGFDTIELN---VGSL--------------------------------EIPEETLLRYVRLVKSAGL 144 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEIS---dGti--------------------------------~i~~~~r~~lI~~~~~~G~ 144 (299)
+..+++.++.++++||++|-|= +|.. +-..+..-+++..+++.|+
T Consensus 36 ~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi 115 (387)
T 4awe_A 36 QPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGI 115 (387)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCC
Confidence 3478999999999999999981 1100 0111223468999999999
Q ss_pred cccceeee
Q 022296 145 KAKPKFAV 152 (299)
Q Consensus 145 ~v~~E~gv 152 (299)
+|..++..
T Consensus 116 ~v~~~~~~ 123 (387)
T 4awe_A 116 KLIVALTN 123 (387)
T ss_dssp EEEEECCB
T ss_pred EEEEeecc
Confidence 99988764
No 388
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=55.23 E-value=13 Score=33.07 Aligned_cols=46 Identities=20% Similarity=0.063 Sum_probs=40.8
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+++++|.++|-+-----.+...+-.+.++.+.+.||.++-|+|-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge 126 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNN 126 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999977765577777889999999999999999886
No 389
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=54.94 E-value=52 Score=31.08 Aligned_cols=20 Identities=15% Similarity=0.062 Sum_probs=15.8
Q ss_pred HHHHHHHHHccCcEEEEecc
Q 022296 198 SRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar 217 (299)
++.++..-++|+++|-+=++
T Consensus 245 ~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 245 TYVARELGKRGIAFICSRER 264 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHhCCCEEEECCC
Confidence 67777778899999987554
No 390
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=54.79 E-value=38 Score=32.34 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=18.3
Q ss_pred hhhhhhhHHHHHHHHHcc------CcEEEEecc
Q 022296 191 VGVGINKSRRAERCLEAG------ADMIMIDSD 217 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAG------A~~VIiEar 217 (299)
.++. ++.++..-++| +++|-+=++
T Consensus 259 ~~~~---~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 259 LSLG---LAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp HHHH---HHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred HHHH---HHHHHHHHhcCCccCCceEEEEEecC
Confidence 4556 77778878899 999988554
No 391
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=54.55 E-value=13 Score=37.52 Aligned_cols=50 Identities=18% Similarity=0.323 Sum_probs=38.0
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.+-++++++|||++|.++= |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 115 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~ 185 (628)
T 1g5a_A 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIF 185 (628)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 44557888999999999862 222 12 2588999999999999999876644
No 392
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=54.42 E-value=25 Score=32.78 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=0.0
Q ss_pred EecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC--C-----cHHHHHHHhCCc
Q 022296 29 MRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--G-----DWAEHLIRNGPS 101 (299)
Q Consensus 29 V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~--G-----tlfE~a~~qg~~ 101 (299)
++.|-- +...++.+.+.|-+| |+.+-.++|.- ++.--+.++..+|.+++ | ...|.-+..
T Consensus 66 lL~p~~----T~~dI~~lc~eA~~~------g~aaVCV~P~~-V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~E--- 131 (288)
T 3oa3_A 66 QLSLSA----TGSQIDVLCAEAKEY------GFATVCVRPDY-VSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSE--- 131 (288)
T ss_dssp CCCTTC----CHHHHHHHHHHHHHH------TCSEEEECGGG-HHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHH---
T ss_pred cCCCCC----CHHHHHHHHHHHHhc------CCcEEEECHHH-HHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHH---
Q ss_pred hHHHHHHHHHHcCCCEEE-------ecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCC
Q 022296 102 AFKEYVEDCKQVGFDTIE-------LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IE-------ISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~ 174 (299)
.+++-+.|-|.|. +-+|--+-=.++-..+.+.+.+..+||+-|-+.
T Consensus 132 -----a~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------------------- 184 (288)
T 3oa3_A 132 -----AKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------------------- 184 (288)
T ss_dssp -----HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG----------------------
T ss_pred -----HHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC----------------------
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEE
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMI 212 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~V 212 (299)
++.+++ ++-++-..+||||+|
T Consensus 185 --------------Lt~eei---~~A~~ia~eaGADfV 205 (288)
T 3oa3_A 185 --------------LTADEI---IAGCVLSSLAGADYV 205 (288)
T ss_dssp --------------CCHHHH---HHHHHHHHHTTCSEE
T ss_pred --------------CCHHHH---HHHHHHHHHcCCCEE
No 393
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=54.41 E-value=13 Score=36.90 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCEEEecC---------CcccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNV---------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISd---------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
=|+++++|||++|.+|- |.-.. +.++..++|+.++++|++|+-.+-.
T Consensus 45 ~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 110 (589)
T 3aj7_A 45 KLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVI 110 (589)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 36788999999999852 32211 3688999999999999999877654
No 394
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=54.41 E-value=13 Score=32.22 Aligned_cols=22 Identities=27% Similarity=0.161 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNVG 123 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdG 123 (299)
...++.+.+.+.|.+.|+++|-
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~ 52 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDL 52 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEecc
Confidence 4667778888899999999873
No 395
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=54.20 E-value=16 Score=37.31 Aligned_cols=53 Identities=21% Similarity=0.397 Sum_probs=42.8
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHcCCcccceeee
Q 022296 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~-~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++|+.|+-..|-
T Consensus 31 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGP 93 (595)
T 4e8d_A 31 PEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSP 93 (595)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEecCC
Confidence 457888999999999999988 56666665 245778999999999999876554
No 396
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=54.11 E-value=36 Score=29.12 Aligned_cols=21 Identities=0% Similarity=-0.126 Sum_probs=15.8
Q ss_pred HHHHHccCcEEEEeccccccCC
Q 022296 202 ERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 202 ~~dLeAGA~~VIiEargi~d~~ 223 (299)
...++|||+.|++= +.|++..
T Consensus 181 ~~~~~aGAd~vvvG-saI~~a~ 201 (218)
T 3jr2_A 181 YLFEGIKTKTFIAG-RALAGAE 201 (218)
T ss_dssp GGGTTSCEEEEEES-GGGSHHH
T ss_pred HHHHHcCCCEEEEc-hhhcCCC
Confidence 44789999999885 5688653
No 397
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=54.04 E-value=8.9 Score=35.48 Aligned_cols=47 Identities=26% Similarity=0.360 Sum_probs=38.6
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
++++++ ++.+.+|.+|||..|=+=.|. -+...+++.+...++++++-
T Consensus 31 vTpeEi---a~~A~~a~~AGAaivHlHvRd-~~G~ps~d~~~~~e~~~~IR 77 (282)
T 2y7e_A 31 ITPEEQ---AKEAKACFEAGARVIHLHIRE-DDGRPSQRLDRFQEAISAIR 77 (282)
T ss_dssp CSHHHH---HHHHHHHHHHTEEEEEECEEC-TTSCEECCHHHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHcCCcEEEEeecC-CCCCcCCCHHHHHHHHHHHH
Confidence 568999 999999999999999999997 44456677777777776544
No 398
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=53.76 E-value=39 Score=30.07 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=47.7
Q ss_pred HHHHhhccc-ccEEEeeCcccccCC----hhHHHHHHHHHHhCCce---ecC--C-c----HH---HHHHHhCCchHHHH
Q 022296 45 DIFESMGQF-VDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVY---VST--G-D----WA---EHLIRNGPSAFKEY 106 (299)
Q Consensus 45 DlLe~ag~y-ID~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~---v~~--G-t----lf---E~a~~qg~~~~~~y 106 (299)
+.|+.+.+. .|++=+.......++ ...+++.-+++.++|+. ++. + . +. +....+.-+.+++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 114 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSR 114 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 555554443 677777755333333 24688888999999998 663 1 1 11 11111111268899
Q ss_pred HHHHHHcCCCEEEec
Q 022296 107 VEDCKQVGFDTIELN 121 (299)
Q Consensus 107 l~~~k~lGF~~IEIS 121 (299)
++.|+++|.++| +.
T Consensus 115 i~~A~~lG~~~v-~~ 128 (335)
T 2qw5_A 115 VDITAALGGEIM-MG 128 (335)
T ss_dssp HHHHHHTTCSEE-EE
T ss_pred HHHHHHcCCCEE-ec
Confidence 999999999999 64
No 399
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=53.76 E-value=30 Score=32.70 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=28.2
Q ss_pred HHHHHHHHHcc-CcEEEEeccccccCCCcccHHHHHHHHhccCCCc
Q 022296 198 SRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLEK 242 (299)
Q Consensus 198 i~~~~~dLeAG-A~~VIiEargi~d~~G~~r~d~i~~ii~~l~~ek 242 (299)
.+.+++.|++| ||.|++ ||++.- +.+++.++.+..++..
T Consensus 290 ~e~a~~~l~~g~aD~V~i-GR~~la-----nPdl~~k~~~g~~l~~ 329 (362)
T 4ab4_A 290 KASANAALASGKADAVAF-GVPFIA-----NPDLPARLAADAPLNE 329 (362)
T ss_dssp HHHHHHHHHTTSCSEEEE-SHHHHH-----CTTHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCccEEEE-CHHhHh-----CcHHHHHHHcCCCCCC
Confidence 34558899998 999988 665432 2468889988877653
No 400
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=53.66 E-value=16 Score=36.49 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=37.1
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----c---------C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----E---------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISd-----------Gti-----~---------i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.+-++++++|||++|.++= |.- + + +.++..++|+.++++|++|+-.+-.
T Consensus 152 i~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 33446788999999999972 110 0 2 3578999999999999999876633
No 401
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=53.58 E-value=10 Score=33.95 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCC---------------hhHHHHHHHHHHHcCCccccee
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSL--EIP---------------EETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti--~i~---------------~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
.+++-++.+|++||++|-+.-..- .-| -+...++|+.++++|++|+-++
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 678899999999999999853211 001 1234579999999999999887
No 402
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=53.50 E-value=1.3e+02 Score=27.64 Aligned_cols=138 Identities=12% Similarity=0.098 Sum_probs=0.0
Q ss_pred chhHHHHHHHhhccc-ccEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 39 SHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 39 g~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
+...+.+.++...++ +|++=+-||.-.-.....+.--..+. ++|+.+.+= |--- .+...+++.+..++++|++
T Consensus 27 ~~~~l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~----~~~~~l~~~L~~~~~~GI~ 101 (310)
T 3apt_A 27 GEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAG----QSRKEVAEVLHRFVESGVE 101 (310)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTT----SCHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCC----CCHHHHHHHHHHHHHCCCC
Q ss_pred EEEecCCcccCC----------hhHHHHHHHHHHHc-C--CcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 117 TIELNVGSLEIP----------EETLLRYVRLVKSA-G--LKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 117 ~IEISdGti~i~----------~~~r~~lI~~~~~~-G--~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
.|=+=.|-..-+ .+.=.+||+.+++. | |. +|+-..-.--+...+
T Consensus 102 niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~----igvA~yPE~Hp~~~~------------------- 158 (310)
T 3apt_A 102 NLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVS----VGGAAYPEGHPESES------------------- 158 (310)
T ss_dssp EEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSE----EEEEECTTCCTTSSC-------------------
T ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeE----EEEEeCCCcCCCCCC-------------------
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
.+.- ++..++-++|||+++|.
T Consensus 159 -------~~~d---~~~Lk~Kv~aGAdf~iT 179 (310)
T 3apt_A 159 -------LEAD---LRHFKAKVEAGLDFAIT 179 (310)
T ss_dssp -------HHHH---HHHHHHHHHHHCSEEEE
T ss_pred -------HHHH---HHHHHHHHHcCCCEEEe
No 403
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=53.47 E-value=12 Score=37.80 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=36.6
Q ss_pred HHHHH--HHHHcCCCEEEecCCcc-------------------------cC-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 104 KEYVE--DCKQVGFDTIELNVGSL-------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 104 ~~yl~--~~k~lGF~~IEISdGti-------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
.+-|+ ++|+|||++|.++==+- .+ +.++..++|+.++++|++|+-.+-
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34467 78999999999984111 11 368999999999999999987763
No 404
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=53.43 E-value=26 Score=31.83 Aligned_cols=65 Identities=8% Similarity=0.225 Sum_probs=40.5
Q ss_pred HHHHHHHhCCceecC--CcH---------HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHH
Q 022296 74 EVVKRAHQHDVYVST--GDW---------AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRL 138 (299)
Q Consensus 74 eKI~l~~~~gV~v~~--Gtl---------fE~a~~qg~~----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~ 138 (299)
+-++.+|+.|++|.+ |+| |..++ .++. -++.-++.|++.|||.|.|.=-.. +++++..++..
T Consensus 57 ~~~~~~~~~~~kv~lsigg~~~~~~~~~~~~~~~-~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~p--~~~d~~~~~~l 133 (319)
T 3cz8_A 57 AAIETTWQRRVTPLATITNLTSGGFSTEIVHQVL-NNPTARTNLVNNIYDLVSTRGYGGVTIDFEQV--SAADRDLFTGF 133 (319)
T ss_dssp HHHHHHHHTTCEEEEEEECEETTEECHHHHHHHH-TCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC--CGGGHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEecCCCCCcCHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCCeEEEeccCC--CHHHHHHHHHH
Confidence 456778999998765 543 22222 2222 366777889999999999975443 24555555444
Q ss_pred HHH
Q 022296 139 VKS 141 (299)
Q Consensus 139 ~~~ 141 (299)
+++
T Consensus 134 l~e 136 (319)
T 3cz8_A 134 LRQ 136 (319)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 405
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=53.33 E-value=39 Score=31.01 Aligned_cols=18 Identities=6% Similarity=0.121 Sum_probs=15.3
Q ss_pred HHHHHHHHcCCCEEEecC
Q 022296 105 EYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd 122 (299)
+..+.|.+.|.|+|-||+
T Consensus 193 ~~a~~a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGG 210 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEEcC
Confidence 456788999999999975
No 406
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=53.29 E-value=17 Score=31.60 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-CChhHHHHHHHHHHH
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE-IPEETLLRYVRLVKS 141 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~-i~~~~r~~lI~~~~~ 141 (299)
...++.+.+.+.|.+.|+++|-.-+ .....-.++++.+++
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~ 71 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP 71 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGG
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHH
Confidence 4677888889999999999874321 111112466777666
No 407
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=53.13 E-value=50 Score=31.15 Aligned_cols=20 Identities=5% Similarity=-0.004 Sum_probs=15.9
Q ss_pred HHHHHHHHHccCcEEEEecc
Q 022296 198 SRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar 217 (299)
++.++..-++|+++|-+=++
T Consensus 253 ~~la~~l~~~Gvd~i~v~~~ 272 (361)
T 3gka_A 253 GHVARELGRRRIAFLFARES 272 (361)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECCC
Confidence 67778888899999987554
No 408
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=53.11 E-value=13 Score=35.65 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=35.9
Q ss_pred HHHH--------HHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDC--------KQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~--------k~lGF~~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+++ |+|||++|.++- |.- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 33 LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 33 LDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp HHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 6778 999999999973 111 11 3689999999999999999877654
No 409
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=53.02 E-value=41 Score=29.43 Aligned_cols=19 Identities=11% Similarity=0.085 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHcCCCEEEe
Q 022296 102 AFKEYVEDCKQVGFDTIEL 120 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEI 120 (299)
.+++.++.|+++|.+.|-+
T Consensus 106 ~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 106 KEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 3556666666666666655
No 410
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=52.99 E-value=31 Score=32.60 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=27.9
Q ss_pred HHHHHHHHHcc-CcEEEEeccccccCCCcccHHHHHHHHhccCCC
Q 022296 198 SRRAERCLEAG-ADMIMIDSDDVCKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 198 i~~~~~dLeAG-A~~VIiEargi~d~~G~~r~d~i~~ii~~l~~e 241 (299)
.+.+++.|++| ||.|++ +|++.-+ .+++.++.+..++.
T Consensus 298 ~e~a~~~l~~G~aD~V~i-GR~~lad-----Pdl~~k~~~g~~l~ 336 (361)
T 3gka_A 298 LDSAQAALDAGQADAVAW-GKLFIAN-----PDLPRRFKLNAPLN 336 (361)
T ss_dssp HHHHHHHHHTTSCSEEEE-SHHHHHC-----TTHHHHHHHTCCCC
T ss_pred HHHHHHHHHcCCccEEEE-CHHhHhC-----cHHHHHHHhCCCCC
Confidence 34558899998 999988 6654422 46788898887765
No 411
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=52.96 E-value=6.1 Score=35.33 Aligned_cols=51 Identities=18% Similarity=0.332 Sum_probs=33.8
Q ss_pred HHHHHHHHHhCCc------eecCC--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH--HHHHHHHHH
Q 022296 72 IEEVVKRAHQHDV------YVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL--LRYVRLVKS 141 (299)
Q Consensus 72 l~eKI~l~~~~gV------~v~~G--tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r--~~lI~~~~~ 141 (299)
..+.++.|+++|| .+.|| |.-|+.- +.++|+|+|-+- |.+.- ..+|+.++.
T Consensus 95 ~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~-------------A~~~Gad~vK~F------Pa~~~gG~~~lkal~~ 155 (217)
T 3lab_A 95 TPELIEKAKQVKLDGQWQGVFLPGVATASEVMI-------------AAQAGITQLKCF------PASAIGGAKLLKAWSG 155 (217)
T ss_dssp CHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHH-------------HHHTTCCEEEET------TTTTTTHHHHHHHHHT
T ss_pred cHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHH-------------HHHcCCCEEEEC------ccccccCHHHHHHHHh
Confidence 4566777788888 77777 6666543 457899999763 32221 467777776
No 412
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=52.86 E-value=98 Score=30.24 Aligned_cols=65 Identities=14% Similarity=0.205 Sum_probs=36.0
Q ss_pred hHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 022296 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~I 118 (299)
...+.+++. | +|.+-+.... -.++ .+.+.|+-.+++ ++++..|+- .-.+..+.+.+.|.|+|
T Consensus 234 ~~a~~l~~a-G--~d~I~id~a~--g~~~-~~~~~i~~ir~~~p~~~Vi~g~v----------~t~e~a~~l~~aGaD~I 297 (496)
T 4fxs_A 234 ERVKALVEA-G--VDVLLIDSSH--GHSE-GVLQRIRETRAAYPHLEIIGGNV----------ATAEGARALIEAGVSAV 297 (496)
T ss_dssp HHHHHHHHT-T--CSEEEEECSC--TTSH-HHHHHHHHHHHHCTTCCEEEEEE----------CSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHhc-c--CceEEecccc--ccch-HHHHHHHHHHHHCCCceEEEccc----------CcHHHHHHHHHhCCCEE
Confidence 344445543 3 7777776443 2333 344555555543 666555421 11133467788999999
Q ss_pred Eec
Q 022296 119 ELN 121 (299)
Q Consensus 119 EIS 121 (299)
-|+
T Consensus 298 ~Vg 300 (496)
T 4fxs_A 298 KVG 300 (496)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 413
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=52.72 E-value=1.2e+02 Score=27.96 Aligned_cols=81 Identities=7% Similarity=0.100 Sum_probs=55.3
Q ss_pred CChhHHHHHHHHHHhCCceecC--C--cHHH----HHHHhCC----------------chHHHHHHHHHHcCCCEEEecC
Q 022296 67 MPKPFIEEVVKRAHQHDVYVST--G--DWAE----HLIRNGP----------------SAFKEYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV~v~~--G--tlfE----~a~~qg~----------------~~~~~yl~~~k~lGF~~IEISd 122 (299)
.+.+.+++.+++++++|.++.. - .+.+ .+..+|. ..+++.++.+++.|... -+.
T Consensus 166 ~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~-~i~- 243 (448)
T 3hm7_A 166 SHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPI-HIC- 243 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE-EEC-
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCE-EEE-
Confidence 3677899999999999987764 2 2322 1111111 14677788888888764 332
Q ss_pred CcccCChhHHHHHHHHHHHcCCcccceeee
Q 022296 123 GSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-++..+-.++|+.+++.|+.|..|+..
T Consensus 244 ---H~s~~~~~~~i~~ak~~G~~v~~e~~p 270 (448)
T 3hm7_A 244 ---HVSSRKVLKRIKQAKGEGVNVSVETCP 270 (448)
T ss_dssp ---CCCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred ---eCCCHHHHHHHHHHHhcCCCEEEEech
Confidence 334567779999999999998887754
No 414
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=52.61 E-value=8.6 Score=32.94 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=59.7
Q ss_pred cccccEEEeeCcccccCChhHHHHHHHHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC
Q 022296 51 GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP 128 (299)
Q Consensus 51 g~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~ 128 (299)
+++| +-|-.+..+ +..+ |.+ +++++|| .+. .|-..++|+.+- . ..+.++||+.+=++|.+-+.+
T Consensus 100 ~~~v-i~K~~~saF--~~t~-L~~---~L~~~gi~~lvi~G~~T~~CV~~T--a-----~da~~~Gy~V~vv~Da~as~~ 165 (204)
T 3hu5_A 100 GETV-LVKTRFSAF--MGTE-CDM---LLRRRGVDTLLVSGTQYPNCIRGT--A-----VDAFALDYDVVVVTDACSART 165 (204)
T ss_dssp TCEE-EECSSSSTT--TTSS-HHH---HHHHTTCCEEEEEEECTTTHHHHH--H-----HHHHHTTCEEEEEEEEEECSS
T ss_pred CCEE-EECCccCCC--CCcC-HHH---HHHhCCCCeEEEeeeccchHHHHH--H-----HHHHHCCCEEEEehhhhCCCC
Confidence 3443 567655443 3332 444 5577899 344 487889998885 3 356689999999999999999
Q ss_pred hhHHHHHHHHHHHcCCccc
Q 022296 129 EETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 129 ~~~r~~lI~~~~~~G~~v~ 147 (299)
++.....++.++..|-.|.
T Consensus 166 ~~~h~~al~~m~~~g~~v~ 184 (204)
T 3hu5_A 166 PGVAESNINDMRAMGITCV 184 (204)
T ss_dssp HHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHhCCEEE
Confidence 9999999999988655433
No 415
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=52.35 E-value=13 Score=34.40 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=36.5
Q ss_pred ChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 022296 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (299)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (299)
..+.|++.|+.+|++||.||. |+ + --.+-++.++++|.++||+-.|
T Consensus 109 ~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qi~aA~~~GAd~IELhTG 154 (260)
T 3o6c_A 109 NHAKLKQSIEKLQNANIEVSL--FI------N--PSLEDIEKSKILKAQFIELHTG 154 (260)
T ss_dssp TCTTHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHTTCSEEEECCH
T ss_pred CHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCCCEEEEech
Confidence 567899999999999999985 11 2 1234578899999999999777
No 416
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=52.34 E-value=19 Score=33.23 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=43.2
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc--------CCh---hHHHHHHHHHHHcCCcccceeee
Q 022296 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--------IPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 92 fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~--------i~~---~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+|..+. +|...++.++.++++||++|-|.-+.-. +.+ +...++|+.++++|++|+-.++-
T Consensus 53 ~e~~W~-~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 53 YETSWS-GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp HHHHTT-CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccCcCC-CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 466653 3345688999999999999999643221 222 34467899999999999877764
No 417
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=52.31 E-value=15 Score=35.94 Aligned_cols=48 Identities=17% Similarity=0.198 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+=++++++|||++|.++- |.-. + +.++..++|+.++++|++|+-.+-.
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 101 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVI 101 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 346788999999999852 2211 1 3688999999999999999877655
No 418
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=52.24 E-value=41 Score=35.71 Aligned_cols=73 Identities=25% Similarity=0.281 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc------------CChhHHHHHHHHHHHc-CCcccceeeeecCCCCCCCccccccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLE------------IPEETLLRYVRLVKSA-GLKAKPKFAVMFNKSDIPSDRDRAFG 168 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~------------i~~~~r~~lI~~~~~~-G~~v~~E~gvK~~~sevg~~~d~~~~ 168 (299)
.+.+..+.+.+.|+|+|||+-++=. -..+...++|+.+++. + +| +.+|... +
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~---~P-v~vK~~~-------~---- 713 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ---IP-FFAKLTP-------N---- 713 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS---SC-EEEEECS-------C----
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC---Cc-eEEEeCC-------C----
Confidence 4556667777789999999876422 2344556788888774 2 22 4555211 0
Q ss_pred ccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 169 AYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
+..+ .+.++...++||+.|++
T Consensus 714 ----------------------~~~~---~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 714 ----------------------VTDI---VSIARAAKEGGADGVTA 734 (1025)
T ss_dssp ----------------------SSCH---HHHHHHHHHHTCSEEEE
T ss_pred ----------------------hHHH---HHHHHHHHHcCCCEEEE
Confidence 1223 55678889999999999
No 419
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=52.19 E-value=19 Score=34.33 Aligned_cols=112 Identities=10% Similarity=0.184 Sum_probs=66.0
Q ss_pred cCChhHHHHHHHHHHhCCceecCCc---HHHH-----H-HHh-CCc-----------hHHHHHHHHHHcCCCEEEecCCc
Q 022296 66 LMPKPFIEEVVKRAHQHDVYVSTGD---WAEH-----L-IRN-GPS-----------AFKEYVEDCKQVGFDTIELNVGS 124 (299)
Q Consensus 66 l~p~~~l~eKI~l~~~~gV~v~~Gt---lfE~-----a-~~q-g~~-----------~~~~yl~~~k~lGF~~IEISdGt 124 (299)
..+++.=+...+.|+++|+....|. .+|. . +.| .|+ ..+++.+.++.+|.|+++|.-..
T Consensus 99 ~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~~~~~~v~r~~P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~ 178 (365)
T 3sr7_A 99 QKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPDDTSYQVKKSRPHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINL 178 (365)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEC-----------------------CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECH
T ss_pred cchhHHHHHHHHHHHHcCCCeecccccccccCccccceEehhhCCCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccc
Confidence 3455555556677888888776652 2322 0 112 122 36788889999999999987554
Q ss_pred c--------cCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhh
Q 022296 125 L--------EIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGIN 196 (299)
Q Consensus 125 i--------~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (299)
. +-+.+.+.+.|+.+++.- -+| |.+| ++|.. .+
T Consensus 179 ~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~P-VivK----~vg~g--------------------------~s------ 219 (365)
T 3sr7_A 179 MQELLMPEGEREFRSWKKHLSDYAKKL--QLP-FILK----EVGFG--------------------------MD------ 219 (365)
T ss_dssp HHHHTSSSSCCCCHHHHHHHHHHHHHC--CSC-EEEE----ECSSC--------------------------CC------
T ss_pred cccccCCCCCCcHHHHHHHHHHHHHhh--CCC-EEEE----ECCCC--------------------------CC------
Confidence 3 122345677888888741 123 5555 12210 01
Q ss_pred hHHHHHHHHHccCcEEEEecc
Q 022296 197 KSRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 197 ~i~~~~~dLeAGA~~VIiEar 217 (299)
.+.+++..++|||.|.|-++
T Consensus 220 -~e~A~~l~~aGad~I~V~g~ 239 (365)
T 3sr7_A 220 -VKTIQTAIDLGVKTVDISGR 239 (365)
T ss_dssp -HHHHHHHHHHTCCEEECCCB
T ss_pred -HHHHHHHHHcCCCEEEEeCC
Confidence 34458889999999999876
No 420
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=52.11 E-value=65 Score=28.41 Aligned_cols=106 Identities=9% Similarity=0.113 Sum_probs=62.9
Q ss_pred ChhHHHHHHHHHHhC--Ccee-c-----C-CcHHHHHHHhC-CchHHHHHHHHHHc-CCCEEEecCCcccCChhHHHHHH
Q 022296 68 PKPFIEEVVKRAHQH--DVYV-S-----T-GDWAEHLIRNG-PSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLLRYV 136 (299)
Q Consensus 68 p~~~l~eKI~l~~~~--gV~v-~-----~-GtlfE~a~~qg-~~~~~~yl~~~k~l-GF~~IEISdGti~i~~~~r~~lI 136 (299)
+.+.+.+.+..++++ ++++ + . ||-+ .+ .+..-++++.+-++ |+++|.|---+. .+.+...+++
T Consensus 45 ~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~-----~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-~~~~~~~~l~ 118 (238)
T 1sfl_A 45 TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYG-----QFTNDSYLNLISDLANINGIDMIDIEWQAD-IDIEKHQRII 118 (238)
T ss_dssp CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCB-----CCCHHHHHHHHHHGGGCTTCCEEEEECCTT-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCC-----CCCHHHHHHHHHHHHHhCCCCEEEEEccCC-CChHHHHHHH
Confidence 456688888888876 4433 1 1 5533 22 01233345555555 699988854321 2777788999
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 137 ~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
+.+++.|-+++--++- ...+++ .+++ ++..++..+.|||.|=|
T Consensus 119 ~~~~~~~~kvI~S~Hd---f~~tp~-----------------------------~~el---~~~~~~~~~~gaDivKi 161 (238)
T 1sfl_A 119 THLQQYNKEVIISHHN---FESTPP-----------------------------LDEL---QFIFFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHHTTCEEEEEEEE---SSCCCC-----------------------------HHHH---HHHHHHHHTTCCSEEEE
T ss_pred HHHHhcCCEEEEEecC---CCCCcC-----------------------------HHHH---HHHHHHHHHcCCCEEEE
Confidence 9999987776554443 221111 3566 77778888999996544
No 421
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=52.07 E-value=58 Score=30.13 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=69.3
Q ss_pred HHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHh----CCceecCCc----HHHHHHH--hCCc----------
Q 022296 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGD----WAEHLIR--NGPS---------- 101 (299)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~----~gV~v~~Gt----lfE~a~~--qg~~---------- 101 (299)
..+.+++.-+++||+ |.|...+..++.+++.+.+.+. .+|+++--| -+|.++. +|..
T Consensus 42 ~A~~~v~~GAdiIDI---g~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~ 118 (300)
T 3k13_A 42 IARQQVEDGALVIDV---NMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEG 118 (300)
T ss_dssp HHHHHHHTTCSEEEE---ECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTC
T ss_pred HHHHHHHCCCCEEEE---CCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccC
Confidence 334455666666664 8898888888889999998873 689999865 3899998 6631
Q ss_pred --hHHHHHHHHHHcCCCEEEecC--CcccCChhHHHH----HHHHH-HHcCCc
Q 022296 102 --AFKEYVEDCKQVGFDTIELNV--GSLEIPEETLLR----YVRLV-KSAGLK 145 (299)
Q Consensus 102 --~~~~yl~~~k~lGF~~IEISd--Gti~i~~~~r~~----lI~~~-~~~G~~ 145 (299)
++++.+..|+++|..+|=... .-+.-+.++|.+ +.+.+ .+.|+.
T Consensus 119 d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~ 171 (300)
T 3k13_A 119 EEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFN 171 (300)
T ss_dssp HHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 456899999999998887653 112333444443 34443 677874
No 422
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=51.85 E-value=16 Score=37.94 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=37.2
Q ss_pred HHHHHHHcCCCEEEec-----C-----Cccc-----C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELN-----V-----GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEIS-----d-----Gti~-----i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-+.++++|||++|+++ . |.-. + +.++..++|+.+.++|++|+-.+-.
T Consensus 207 ~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 273 (755)
T 3aml_A 207 VLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 273 (755)
T ss_dssp THHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4788999999999997 1 1111 1 3689999999999999999888755
No 423
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=51.47 E-value=17 Score=33.39 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=28.4
Q ss_pred HHHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHcCCccc
Q 022296 103 FKEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 103 ~~~yl~~~k~l-GF~~IEISdGti----~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
.+.-++.++++ ||+.||+.-.-+ .++.++..++.+.+.+.||++.
T Consensus 23 ~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~ 72 (367)
T 1tz9_A 23 DAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALL 72 (367)
T ss_dssp CCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEE
Confidence 34446777777 888887753222 2345566677777777777754
No 424
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=51.32 E-value=14 Score=37.03 Aligned_cols=46 Identities=15% Similarity=0.048 Sum_probs=35.7
Q ss_pred HHHHHH-cCCCEEEecCCcc-------------cC-----ChhHHHHHHHHHHHcC--C--cccceeee
Q 022296 107 VEDCKQ-VGFDTIELNVGSL-------------EI-----PEETLLRYVRLVKSAG--L--KAKPKFAV 152 (299)
Q Consensus 107 l~~~k~-lGF~~IEISdGti-------------~i-----~~~~r~~lI~~~~~~G--~--~v~~E~gv 152 (299)
|.++|+ |||++|+++==+- .+ +.++..++|+.+.++| + +|+-.+-.
T Consensus 197 LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~ 265 (637)
T 1ji1_A 197 LGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVF 265 (637)
T ss_dssp HHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECC
T ss_pred HHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECc
Confidence 678899 9999999973111 01 3689999999999999 9 88776644
No 425
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=51.26 E-value=24 Score=31.95 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHHcCCCEEEecC---Cc---cc-----CC---hhHHHHHHHHHHHcCCcccceeee
Q 022296 100 PSAFKEYVEDCKQVGFDTIELNV---GS---LE-----IP---EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEISd---Gt---i~-----i~---~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
++.+++.++.+|++||++|-+.- |. +. .+ .+..-++|+.++++|++|+-++.-
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~ 107 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVN 107 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 45799999999999999999753 21 11 11 223356889999999999887653
No 426
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=51.07 E-value=12 Score=36.58 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=40.9
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcc---------cCCh---hHHHHHHHHHHHcCCcccceeee
Q 022296 98 NGPSAFKEYVEDCKQVGFDTIELNVGSL---------EIPE---ETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 98 qg~~~~~~yl~~~k~lGF~~IEISdGti---------~i~~---~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+|...++.++.++++||++|-|+-+-- .+++ +...++|+.++++|++|+-.++-
T Consensus 42 ~~~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 42 GNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp SCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CCCcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3445678999999999999999964421 2232 44567899999999999876654
No 427
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=51.03 E-value=67 Score=28.74 Aligned_cols=104 Identities=11% Similarity=0.101 Sum_probs=61.9
Q ss_pred ChhHHHHHHHHHHhC--Cce-ecC------CcHH-HHHHHhCCchHHHHHHHHHHcC-CCEEEecCCcccCChhHHHHHH
Q 022296 68 PKPFIEEVVKRAHQH--DVY-VST------GDWA-EHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGSLEIPEETLLRYV 136 (299)
Q Consensus 68 p~~~l~eKI~l~~~~--gV~-v~~------Gtlf-E~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGti~i~~~~r~~lI 136 (299)
+.+.+.+-+...+++ +++ ++| ||-+ +.- .+..-++++.+-++| +++|.|-- ..+. ...+++
T Consensus 61 ~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~----~~~~~~ll~~~~~~g~~d~iDvEl---~~~~-~~~~l~ 132 (257)
T 2yr1_A 61 DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLN----EAEVRRLIEAICRSGAIDLVDYEL---AYGE-RIADVR 132 (257)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSC----HHHHHHHHHHHHHHTCCSEEEEEG---GGTT-HHHHHH
T ss_pred cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCC----HHHHHHHHHHHHHcCCCCEEEEEC---CCCh-hHHHHH
Confidence 345677777777765 442 221 5533 211 113345566677888 99988753 2344 666889
Q ss_pred HHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 137 RLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 137 ~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
+.+++.|-+++--++- ...+++ .+++ ++..++..+.|||.|=|
T Consensus 133 ~~~~~~~~kvI~S~Hd---f~~tP~-----------------------------~~el---~~~~~~~~~~gaDivKi 175 (257)
T 2yr1_A 133 RMTEECSVWLVVSRHY---FDGTPR-----------------------------KETL---LADMRQAERYGADIAKV 175 (257)
T ss_dssp HHHHHTTCEEEEEEEE---SSCCCC-----------------------------HHHH---HHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCEEEEEecC---CCCCcC-----------------------------HHHH---HHHHHHHHhcCCCEEEE
Confidence 9888887776554443 221111 3566 67778888999996544
No 428
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=50.80 E-value=30 Score=33.39 Aligned_cols=25 Identities=8% Similarity=0.088 Sum_probs=19.5
Q ss_pred hhhhhhhHHHHHHHHH-ccCcEEEEeccc
Q 022296 191 VGVGINKSRRAERCLE-AGADMIMIDSDD 218 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLe-AGA~~VIiEarg 218 (299)
.++. ++.++.-.+ +|+|+|-|=+++
T Consensus 263 ~ed~---~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 263 IDEF---NQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp HHHH---HHHHHHHHHHSCCCCEEECCTT
T ss_pred HHHH---HHHHHHHHhhcCCcEEEEeeCC
Confidence 4566 777788888 999999987754
No 429
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=50.76 E-value=39 Score=29.81 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=0.0
Q ss_pred EecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceec------CC-cHHHHHHHhCCc
Q 022296 29 MRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS------TG-DWAEHLIRNGPS 101 (299)
Q Consensus 29 V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~------~G-tlfE~a~~qg~~ 101 (299)
++.|-- +...++.+++.+-+| |+.+-.++|.- ++.-.+.++..+|.++ .| .-.|.-+..
T Consensus 11 ~L~p~~----t~~~i~~l~~~a~~~------~~~aVcv~p~~-v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e--- 76 (220)
T 1ub3_A 11 LLKPTA----TLEEVAKAAEEALEY------GFYGLCIPPSY-VAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALE--- 76 (220)
T ss_dssp CCCTTC----CHHHHHHHHHHHHHH------TCSEEECCGGG-HHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHH---
T ss_pred ccCCCC----CHHHHHHHHHHHHHh------CCCEEEECHHH-HHHHHHHhCCCCceEEEEecCCCCCCchHHHHHH---
Q ss_pred hHHHHHHHHHHcCCCEEEecC-------CcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCC
Q 022296 102 AFKEYVEDCKQVGFDTIELNV-------GSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARA 174 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd-------Gti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~ 174 (299)
.+++-++|-|.|.+-= |.-+--.++..++.+.+.+.+++|+-|-+.
T Consensus 77 -----~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------------------- 129 (220)
T 1ub3_A 77 -----AALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------------------- 129 (220)
T ss_dssp -----HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG----------------------
T ss_pred -----HHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC----------------------
Q ss_pred CCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEE
Q 022296 175 PRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMI 212 (299)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~V 212 (299)
++.+++ +.-++-..++|||+|
T Consensus 130 --------------l~~e~i---~~a~~ia~eaGADfV 150 (220)
T 1ub3_A 130 --------------FSPEEI---ARLAEAAIRGGADFL 150 (220)
T ss_dssp --------------SCHHHH---HHHHHHHHHHTCSEE
T ss_pred --------------CCHHHH---HHHHHHHHHhCCCEE
No 430
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=50.68 E-value=16 Score=34.69 Aligned_cols=120 Identities=13% Similarity=0.056 Sum_probs=64.6
Q ss_pred HHHHHHHHHHh------CCceecCCcHHHHHHHhCCc---hHHHHHHHHHHcCCCEEEecCCcccCChh-HHHHHHHHHH
Q 022296 71 FIEEVVKRAHQ------HDVYVSTGDWAEHLIRNGPS---AFKEYVEDCKQVGFDTIELNVGSLEIPEE-TLLRYVRLVK 140 (299)
Q Consensus 71 ~l~eKI~l~~~------~gV~v~~GtlfE~a~~qg~~---~~~~yl~~~k~lGF~~IEISdGti~i~~~-~r~~lI~~~~ 140 (299)
.+.|.++-.++ -+|+++++.|++-. .+.. ...++.+.+.+.|.++|+||.|+..-... .-.++++.++
T Consensus 218 ~~~eiv~aVr~avg~~~v~vrls~~~~~~~~--~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik 295 (377)
T 2r14_A 218 FPLEVVDAVAEVFGPERVGIRLTPFLELFGL--TDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMR 295 (377)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCCTTC--CCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcEEEEeccccccCCC--CCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHH
Confidence 34555554443 34566665443210 0111 24455677778899999999987421110 0134556665
Q ss_pred HcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHcc-CcEEEEecccc
Q 022296 141 SAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAG-ADMIMIDSDDV 219 (299)
Q Consensus 141 ~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIiEargi 219 (299)
+. +. +|=++. + .++ .+.+++.|++| ||.|++ +|++
T Consensus 296 ~~-~~-iPvi~~----------G------------------------gi~-------~~~a~~~l~~g~aD~V~i-gR~~ 331 (377)
T 2r14_A 296 QR-FK-GGLIYC----------G------------------------NYD-------AGRAQARLDDNTADAVAF-GRPF 331 (377)
T ss_dssp HH-CC-SEEEEE----------S------------------------SCC-------HHHHHHHHHTTSCSEEEE-SHHH
T ss_pred HH-CC-CCEEEE----------C------------------------CCC-------HHHHHHHHHCCCceEEee-cHHH
Confidence 52 00 111111 0 111 45568899998 999998 6765
Q ss_pred ccCCCcccHHHHHHHHhccCCC
Q 022296 220 CKHADSLRADIIAKVIGRLGLE 241 (299)
Q Consensus 220 ~d~~G~~r~d~i~~ii~~l~~e 241 (299)
+.+ .+++.++.+..++.
T Consensus 332 l~~-----P~l~~k~~~g~~l~ 348 (377)
T 2r14_A 332 IAN-----PDLPERFRLGAALN 348 (377)
T ss_dssp HHC-----TTHHHHHHHTCCCC
T ss_pred HhC-----chHHHHHHcCCCCC
Confidence 532 56788887765543
No 431
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=50.55 E-value=18 Score=35.73 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=71.8
Q ss_pred HHHHHHHHcCCCEEEecC----------CcccC----------ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCccc
Q 022296 105 EYVEDCKQVGFDTIELNV----------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISd----------Gti~i----------~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d 164 (299)
+-+.+++++||++|+++- |.-.. +.++..++|+.++++|++|+-.+-..+-..+-.. -
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~--~ 200 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNY--M 200 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCC--G
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCCCCc--c
Confidence 346888999999999862 11111 1478899999999999999988855321111000 0
Q ss_pred cccccccc---CCCCccchhcccCCCccc-hhhhhhhHHHHHHHH-HccCcEEEEecc-ccccCCC-cccHHHHHHHHhc
Q 022296 165 RAFGAYVA---RAPRSTDKLFLASNPEIE-VGVGINKSRRAERCL-EAGADMIMIDSD-DVCKHAD-SLRADIIAKVIGR 237 (299)
Q Consensus 165 ~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~dL-eAGA~~VIiEar-gi~d~~G-~~r~d~i~~ii~~ 237 (299)
..+..+.. ...|....-+ .....-. .+.+ ++.++..+ +.|+|=.-+++= .+.+... .+-.++.+ .+..
T Consensus 201 ~~~~~~~~~~~~~~~g~~~n~-~~~~~~~v~~~l---~~~~~~w~~~~gvDGfR~D~~~~~~~~~~~~f~~~l~~-~~~~ 275 (558)
T 3vgf_A 201 VKLGPYFSQKYKTPWGLTFNF-DDAESDEVRKFI---LENVEYWIKEYNVDGFRLSAVHAIIDTSPKHILEEIAD-VVHK 275 (558)
T ss_dssp GGTSCCEEEEEEETTEEEECS-SSTTHHHHHHHH---HHHHHHHHHHHCCCEEEESCGGGCCCCSSSCHHHHHHH-HHHH
T ss_pred cccCCccCCCCCCCCCCcccC-CCCCCHHHHHHH---HHHHHHHHHHhCCCEEEEecccccccccHHHHHHHHHH-HHhh
Confidence 00000110 1123221100 0000000 2445 77777788 689999999885 5554432 22222222 2333
Q ss_pred cCCCceEEecC
Q 022296 238 LGLEKTMFEAT 248 (299)
Q Consensus 238 l~~eklifEAP 248 (299)
.. --+|=|+.
T Consensus 276 ~~-~~~iaE~~ 285 (558)
T 3vgf_A 276 YN-RIVIAESD 285 (558)
T ss_dssp TT-CEEEEECS
T ss_pred cC-EEEEEecC
Confidence 33 55666764
No 432
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=50.36 E-value=16 Score=39.95 Aligned_cols=50 Identities=8% Similarity=0.145 Sum_probs=38.0
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc----------------------C---------ChhHHHHHHHHHHHcCCcccceee
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLE----------------------I---------PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~----------------------i---------~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+.+=+.++|+||+++||++=-+-. + +.++..++|+.++++|++|+-.+-
T Consensus 855 I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 855 IAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 334478889999999998732221 1 346899999999999999988775
Q ss_pred e
Q 022296 152 V 152 (299)
Q Consensus 152 v 152 (299)
.
T Consensus 935 ~ 935 (1108)
T 3ttq_A 935 D 935 (1108)
T ss_dssp C
T ss_pred c
Confidence 5
No 433
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=50.17 E-value=48 Score=29.09 Aligned_cols=38 Identities=11% Similarity=0.152 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHcCCC--EEEecCCc----ccCChhHHHHHHHHHHHc
Q 022296 101 SAFKEYVEDCKQVGFD--TIELNVGS----LEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~--~IEISdGt----i~i~~~~r~~lI~~~~~~ 142 (299)
..+.+-++.+.+.|.| ++-|.||. +++..+ +|+.+++.
T Consensus 17 ~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~----~v~~ir~~ 60 (228)
T 3ovp_A 17 ANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHP----VVESLRKQ 60 (228)
T ss_dssp GGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHH----HHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHH----HHHHHHHh
Confidence 3678889999999998 66778887 556555 45555553
No 434
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=50.15 E-value=72 Score=28.91 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=68.4
Q ss_pred HHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC-CceecCCc----HHHHHHHh--CC----------chHHH
Q 022296 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFKE 105 (299)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-gV~v~~Gt----lfE~a~~q--g~----------~~~~~ 105 (299)
.+.+++.-++ ++=+|++++.--..+.+...|+..++. +++++--| -+|.|+.. |. +++++
T Consensus 40 a~~~v~~GAd---iIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~d~~~~ 116 (271)
T 2yci_X 40 ARRQAEKGAH---YLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQWKMDI 116 (271)
T ss_dssp HHHHHHTTCS---EEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCHHHHHH
T ss_pred HHHHHHCCCC---EEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCccccHH
Confidence 3445554444 455788887655566778888888765 99998754 48888877 63 23578
Q ss_pred HHHHHHHcCCCEEEecCC--cccCChh----HHHHHHHHHHHcCCc
Q 022296 106 YVEDCKQVGFDTIELNVG--SLEIPEE----TLLRYVRLVKSAGLK 145 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdG--ti~i~~~----~r~~lI~~~~~~G~~ 145 (299)
.+..|+++|...|=...+ -+.-+.+ ...+.++.+.+.|+.
T Consensus 117 ~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 117 FFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIP 162 (271)
T ss_dssp HHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 999999999998887642 2333323 344577778887765
No 435
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=50.07 E-value=24 Score=33.29 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=47.8
Q ss_pred cCChhHHHHHHHHHHhCCceec---C-C--cH-HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc--------ccCChh
Q 022296 66 LMPKPFIEEVVKRAHQHDVYVS---T-G--DW-AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS--------LEIPEE 130 (299)
Q Consensus 66 l~p~~~l~eKI~l~~~~gV~v~---~-G--tl-fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGt--------i~i~~~ 130 (299)
.+|.+.|++-|+....++..+. . . +| +|+-.. + +.. . +++.=+.|. --.+.+
T Consensus 29 f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~~-~-~~~-------~----~~~~~~~g~~~~~~~~~g~YT~~ 95 (367)
T 1yht_A 29 FYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLL-N-QRA-------E----NAVQGKDGIYINPYTGKPFLSYR 95 (367)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTT-T-BCG-------G----GSEECTTSCEECTTTCCEEBCHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecch-h-hhh-------h----hhccccCCCcCCCCCCCCCcCHH
Confidence 5778899999999988888544 2 2 44 443110 0 000 0 000001221 248999
Q ss_pred HHHHHHHHHHHcCCcccceeee
Q 022296 131 TLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 131 ~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+-.++++.|+++|.+|+||+-.
T Consensus 96 di~eiv~YA~~rgI~VIPEID~ 117 (367)
T 1yht_A 96 QLDDIKAYAKAKGIELIPELDS 117 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeccc
Confidence 9999999999999999999966
No 436
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=49.84 E-value=19 Score=36.91 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=36.9
Q ss_pred HHHHHHHcCCCEEEecC-------------------Cccc---------CC--------hhHHHHHHHHHHHcCCcccce
Q 022296 106 YVEDCKQVGFDTIELNV-------------------GSLE---------IP--------EETLLRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 106 yl~~~k~lGF~~IEISd-------------------Gti~---------i~--------~~~r~~lI~~~~~~G~~v~~E 149 (299)
-+.++|+|||++|+++= |.-. .. .++..++|+.+.++|++|+-.
T Consensus 207 ~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilD 286 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIID 286 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEE
Confidence 37888999999999871 3221 11 489999999999999999887
Q ss_pred eee
Q 022296 150 FAV 152 (299)
Q Consensus 150 ~gv 152 (299)
+-.
T Consensus 287 vV~ 289 (718)
T 2vr5_A 287 VVY 289 (718)
T ss_dssp ECC
T ss_pred ecc
Confidence 755
No 437
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=49.83 E-value=22 Score=32.49 Aligned_cols=45 Identities=16% Similarity=0.299 Sum_probs=39.1
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022296 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~-~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
|....+.+++|-+.|.. .|-++.|+ +.++..++.+.+++.|++++
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITEGI---PVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 56789999999999999 77788886 77778899999999999766
No 438
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=49.72 E-value=8.7 Score=33.90 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=50.5
Q ss_pred HHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 78 RAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 78 l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
+++++|| .+. .|-..++|+.+- ...+.++||+.+=++|.+-..+.+.....++.++..|-.+.+
T Consensus 151 ~L~~~gi~~lvv~G~~T~~CV~~T-------a~dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~ 216 (227)
T 3r2j_A 151 LLHSIGARRVFVCGVAYDFCVFFT-------AMDARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLK 216 (227)
T ss_dssp HHHHHTCCEEEEEESCTTTHHHHH-------HHHHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEEC
T ss_pred HHHHcCCCEEEEEEeccchHHHHH-------HHHHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4456688 444 477888888885 334567999999999999999999999999999998766543
No 439
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=49.42 E-value=30 Score=31.82 Aligned_cols=139 Identities=15% Similarity=0.182 Sum_probs=75.5
Q ss_pred CChhHHHHHHHHHHhCCc-eecC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCC
Q 022296 67 MPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~gV-~v~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~ 144 (299)
++.+.+.+.++.+.++|+ .++. |++-|--. ...+.+.+.++.+++.|+.. -+++|++ +.+ .++.+++.|+
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~-~~~~~l~~ll~~ik~~g~~i-~~t~G~l--~~e----~l~~L~~aGv 170 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKAMGLEA-CMTLGTL--SES----QAQRLANAGL 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT-TTHHHHHHHHHHHHHTTSEE-EEECSSC--CHH----HHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc-CCHHHHHHHHHHHHHcCCeE-EEecCCC--CHH----HHHHHHHCCC
Confidence 556667777888888887 4454 33311100 11236788888999988864 4888874 333 4566677777
Q ss_pred cccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCC
Q 022296 145 KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHAD 224 (299)
Q Consensus 145 ~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G 224 (299)
.-.+ ++++- .+..+..+ .+ . -+.+++ ++.++...++|-. +....|+.- |
T Consensus 171 d~v~-i~les--------~~e~~~~i-~~------------~--~~~~~~---l~~i~~a~~~Gi~---v~~~~I~Gl-~ 219 (369)
T 1r30_A 171 DYYN-HNLDT--------SPEFYGNI-IT------------T--RTYQER---LDTLEKVRDAGIK---VCSGGIVGL-G 219 (369)
T ss_dssp CEEE-CCCBS--------CHHHHHHH-CC------------S--SCHHHH---HHHHHHHHHHHCE---EECCEEECS-S
T ss_pred CEEe-ecCcC--------CHHHHHHh-CC------------C--CCHHHH---HHHHHHHHHcCCe---eeeeeEeeC-C
Confidence 5332 34421 11000000 00 0 125566 8999999999973 345545544 4
Q ss_pred cccHHHHHH--HHhccC--CCceE
Q 022296 225 SLRADIIAK--VIGRLG--LEKTM 244 (299)
Q Consensus 225 ~~r~d~i~~--ii~~l~--~ekli 244 (299)
+-.++..+. .+..++ ++.+-
T Consensus 220 et~ed~~~~l~~l~~l~~~~~~i~ 243 (369)
T 1r30_A 220 ETVKDRAGLLLQLANLPTPPESVP 243 (369)
T ss_dssp CCHHHHHHHHHHHHSSSSCCSEEE
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEE
Confidence 434443322 234565 44543
No 440
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=49.32 E-value=21 Score=36.92 Aligned_cols=53 Identities=19% Similarity=0.261 Sum_probs=42.4
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHcCCcccceeee
Q 022296 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~~IEI---------SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
|+..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++|+.|+-..|-
T Consensus 39 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GP 101 (654)
T 3thd_A 39 RFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGP 101 (654)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccCC
Confidence 457888999999999999988 556666653 34778999999999999866544
No 441
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=49.09 E-value=39 Score=29.34 Aligned_cols=89 Identities=9% Similarity=-0.030 Sum_probs=57.7
Q ss_pred ccccCChhHHHHHHHHHHhCCceecC-C-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEE
Q 022296 63 SHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTI 118 (299)
Q Consensus 63 Ts~l~p~~~l~eKI~l~~~~gV~v~~-G-tlfE~a~~qg~~~~~~yl~~~k~lGF----------------------~~I 118 (299)
...+..++.+....++++++++...- - -+-|.....+...+.+.++.++++|| |.|
T Consensus 113 ~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~L~~l~~d~i 192 (268)
T 3hv8_A 113 SASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFI 192 (268)
T ss_dssp HHHHTCTTHHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSTTGGGGTCCCSEE
T ss_pred HHHhcCchHHHHHHHHHHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCCCChHHHHHHHhCCCCEE
Confidence 34466777778788888888864332 1 24577776665578888888888775 555
Q ss_pred EecCCccc-CChh----HHHHHHHHHHHcCCcccceeee
Q 022296 119 ELNVGSLE-IPEE----TLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 119 EISdGti~-i~~~----~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-|+-.++. +..+ .-..+|..+++.|.+|.-| ||
T Consensus 193 KiD~~~v~~~~~~~~~~~l~~ii~~~~~~~~~viae-GV 230 (268)
T 3hv8_A 193 KIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FV 230 (268)
T ss_dssp EECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred EECHHHHHhhhcChhHHHHHHHHHHHHHcCCCEEEE-ee
Confidence 55544442 2222 2345677888888887777 66
No 442
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=48.87 E-value=1.8e+02 Score=27.39 Aligned_cols=49 Identities=10% Similarity=0.009 Sum_probs=30.6
Q ss_pred CChhHHHHHHHHHHhC-Cc----eecCC-cHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCCc
Q 022296 67 MPKPFIEEVVKRAHQH-DV----YVSTG-DWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVGS 124 (299)
Q Consensus 67 ~p~~~l~eKI~l~~~~-gV----~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lG-F~~IEISdGt 124 (299)
..++.+.+.++-.++. ++ ++.|+ +.- .+.+..+.+.+.| .|.|-++|.+
T Consensus 176 ~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~---------~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 176 YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFA---------HFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp GSHHHHHHHHHHHHHHCCSCEEEEECCCCSHH---------HHHHHHHHHHTCTTEEEEEECCCE
T ss_pred cCHHHHHHHHHHHHHhhCCCeEEEecCCCCHH---------HHHHHHHHHHhCCCccEEEEeccc
Confidence 4567777777777764 33 44455 211 3455666667787 8888877654
No 443
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=48.83 E-value=59 Score=27.53 Aligned_cols=86 Identities=15% Similarity=0.158 Sum_probs=45.2
Q ss_pred EEeeCcccccCChhHHHHHHHHHHhCCc-eecCC-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--ChhH-
Q 022296 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--PEET- 131 (299)
Q Consensus 57 lKfg~GTs~l~p~~~l~eKI~l~~~~gV-~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i--~~~~- 131 (299)
.|+|.-|.. +++..+.+.++.++++|. .|-.. .......... .++++.+.+++.|+...-++-. ..+ +.++
T Consensus 4 Mk~~~~~~~-~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~--~~~~~~~~l~~~gl~~~~~~~~-~~~~~~~~~~ 79 (281)
T 3u0h_A 4 MEPCLHPTL-VDETSLVLYLDLARETGYRYVDVPFHWLEAEAERH--GDAAVEAMFQRRGLVLANLGLP-LNLYDSEPVF 79 (281)
T ss_dssp CEEEECGGG-TTCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHH--CHHHHHHHHHTTTCEECCEECC-SCTTSCHHHH
T ss_pred chhhhcchh-ccCCCHHHHHHHHHHcCCCEEEecHHHHHHHhccc--CHHHHHHHHHHcCCceEEeccc-ccccCCCHHH
Confidence 577777743 344447777777777776 33332 1111111222 5677777777777765444322 122 2222
Q ss_pred ------HHHHHHHHHHcCCcc
Q 022296 132 ------LLRYVRLVKSAGLKA 146 (299)
Q Consensus 132 ------r~~lI~~~~~~G~~v 146 (299)
..+.|+.+++.|-+.
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~ 100 (281)
T 3u0h_A 80 LRELSLLPDRARLCARLGARS 100 (281)
T ss_dssp HHHHHTHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCE
Confidence 234666777766653
No 444
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=48.79 E-value=35 Score=30.48 Aligned_cols=47 Identities=13% Similarity=0.060 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHcCCCEEEecC-CcccCChhHHHHHHHHHHHc--CCcccceeee
Q 022296 101 SAFKEYVEDCKQVGFDTIELNV-GSLEIPEETLLRYVRLVKSA--GLKAKPKFAV 152 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISd-Gti~i~~~~r~~lI~~~~~~--G~~v~~E~gv 152 (299)
+.+..|...++-+||..|=+.. |+. . -.++|+++++. ...+.-.+|+
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~sG~~--~---~~~~i~~i~~~~~~~Pv~vGGGI 189 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEYSGVL--G---DIEAVKKTKAVLETSTLFYGGGI 189 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTSC--C---CHHHHHHHHHHCSSSEEEEESSC
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCc--C---CHHHHHHHHHhcCCCCEEEeCCC
Confidence 3567788888888888876644 332 1 25778887775 3455555555
No 445
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=48.41 E-value=24 Score=31.18 Aligned_cols=18 Identities=22% Similarity=0.580 Sum_probs=8.4
Q ss_pred HHHHHHHHHcCCCEEEec
Q 022296 104 KEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 104 ~~yl~~~k~lGF~~IEIS 121 (299)
++.++.++++||++|-++
T Consensus 36 ~~d~~~l~~~G~n~vR~~ 53 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIP 53 (317)
T ss_dssp THHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 344444444555544443
No 446
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=48.35 E-value=45 Score=31.44 Aligned_cols=27 Identities=15% Similarity=0.139 Sum_probs=21.4
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccC
Q 022296 101 SAFKEYVEDCKQVGFDTIELNVGSLEI 127 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEISdGti~i 127 (299)
+...+.++.+++.||++++|.-.+-..
T Consensus 136 ~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 136 EIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 367889999999999999996554433
No 447
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=48.34 E-value=43 Score=30.40 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=61.2
Q ss_pred chhHHHHHHHhhcccc-cEEEeeCcccccCChhHHHHHHHHHHhCCceecCC-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 39 SHNVLEDIFESMGQFV-DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 39 g~~~l~DlLe~ag~yI-D~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~G-tlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
......++++..++|+ +++|.|.--..-+..+.+ +.+++.|..|..- -+..+ |+-+..|.+.+.++|.|
T Consensus 15 ~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~~v----~~Lk~~g~~VflDlK~~DI-----pnTv~~a~~~~~~~gad 85 (259)
T 3tfx_A 15 NEEQLNKILSKLGDPHDVFVKVGMELFYNAGIDVI----KKLTQQGYKIFLDLKMHDI-----PNTVYNGAKALAKLGIT 85 (259)
T ss_dssp CHHHHHHHHHTTCCGGGCEEEECHHHHHHHCHHHH----HHHHHTTCEEEEEEEECSC-----HHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHhCcccceEEEeCHHHHHhcCHHHH----HHHHHCCCcEEEEeccccc-----chHHHHHHHHHHhcCCC
Confidence 6778899999999999 999999765555554444 3445557666543 12221 23456677889999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHH
Q 022296 117 TIELNVGSLEIPEETLLRYVRLVKS 141 (299)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~ 141 (299)
.|-|+- ....+....+++.+++
T Consensus 86 ~vTVh~---~~G~~~~~aa~~~~~~ 107 (259)
T 3tfx_A 86 FTTVHA---LGGSQMIKSAKDGLIA 107 (259)
T ss_dssp EEEEEG---GGCHHHHHHHHHHHHH
T ss_pred EEEEcC---CCCHHHHHHHHHHHHH
Confidence 999964 2345555566666654
No 448
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=48.34 E-value=45 Score=30.72 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=81.8
Q ss_pred HHcCCCEEEecCCc----------ccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccch
Q 022296 111 KQVGFDTIELNVGS----------LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (299)
Q Consensus 111 k~lGF~~IEISdGt----------i~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~ 180 (299)
.+.||++|=+|+.+ ..++-++....++.+.+. .. +| +-+ ..+.|.+
T Consensus 32 ~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~-~~-~P-via---D~d~Gyg------------------ 87 (290)
T 2hjp_A 32 EQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIAST-VS-IP-LIA---DIDTGFG------------------ 87 (290)
T ss_dssp HHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTT-CS-SC-EEE---ECTTTTS------------------
T ss_pred HHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc-CC-CC-EEE---ECCCCCC------------------
Confidence 34799999999732 357888888888888773 21 33 333 1122210
Q ss_pred hcccCCCccchhhhhhhHHHHHHHHHccCcEEEEeccc--------------cccC---------------CCcc----c
Q 022296 181 LFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSDD--------------VCKH---------------ADSL----R 227 (299)
Q Consensus 181 ~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEarg--------------i~d~---------------~G~~----r 227 (299)
+++.. .+.+++.++|||..|.||.-- ++.. ++.. |
T Consensus 88 ---------~~~~~---~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aR 155 (290)
T 2hjp_A 88 ---------NAVNV---HYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIAR 155 (290)
T ss_dssp ---------SHHHH---HHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEE
T ss_pred ---------CHHHH---HHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 14556 889999999999999999741 1111 1111 1
Q ss_pred ----------HHHHHHHH--hccCCCceEEec--CCchhHHHHHHHhCCCcccccCCC--Cchhhhhhh
Q 022296 228 ----------ADIIAKVI--GRLGLEKTMFEA--TNPRTSEWFIRRYGPKVNLFVDHS--QVMDLECLR 280 (299)
Q Consensus 228 ----------~d~i~~ii--~~l~~eklifEA--P~k~qQ~~fI~~fG~~VNLgI~~~--eVi~LE~LR 280 (299)
++.++... ..-|.+-|..|+ |++++-..|.+.+...|++-+.+. ..+.++.|.
T Consensus 156 tda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~ 224 (290)
T 2hjp_A 156 VEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIA 224 (290)
T ss_dssp ECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHH
T ss_pred ehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHH
Confidence 23332222 345889999999 457888899999984455432211 334555554
No 449
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=48.05 E-value=18 Score=32.97 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=38.6
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022296 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 100 ~~~~~~yl~~~k~lGF~-~IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
|....+.+++|-+.|.. .|.++.|+ +.++..++++.+++.|++++
T Consensus 80 ~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 80 APFAKDAVFEAIDAGIELIVVITEHI---PVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 34688999999999999 78888886 67778899999999999766
No 450
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=47.97 E-value=28 Score=32.45 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=8.7
Q ss_pred hHHHHHHHHHHcCCCEE
Q 022296 102 AFKEYVEDCKQVGFDTI 118 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~I 118 (299)
.++++++.|++.|+-+|
T Consensus 88 ~ld~~v~~a~~~GiyVI 104 (345)
T 3jug_A 88 TVREVIELAEQNKMVAV 104 (345)
T ss_dssp HHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 35555555555555443
No 451
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=47.93 E-value=15 Score=39.48 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHcCCcccceee
Q 022296 101 SAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEI---------SdGti~i~~-~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++||.|+-..|
T Consensus 36 ~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 36 SLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp GGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 57888899999999999998 677777763 3567899999999999988776
No 452
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=47.81 E-value=34 Score=29.67 Aligned_cols=96 Identities=23% Similarity=0.199 Sum_probs=54.9
Q ss_pred HHHHHHHhhcc-----cccEEEeeCcccccCChhHHHHHHHHHHhC-----CceecC-C-cHHHHHHHhCCc--------
Q 022296 42 VLEDIFESMGQ-----FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-----DVYVST-G-DWAEHLIRNGPS-------- 101 (299)
Q Consensus 42 ~l~DlLe~ag~-----yID~lKfg~GTs~l~p~~~l~eKI~l~~~~-----gV~v~~-G-tlfE~a~~qg~~-------- 101 (299)
.|+++|+.+.+ +|| +|-... .+....+..+++.+++ .|.++. - ..+..+-...|+
T Consensus 96 tL~evl~~~~~~~~~l~iE-iK~~~~----~~~~~~~~v~~~l~~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~ 170 (247)
T 2otd_A 96 LLSQVAERCREHGMMANIE-IKPTTG----TGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQQAAPELPRGLLLD 170 (247)
T ss_dssp BHHHHHHHHHHTTCEEEEE-ECCCTT----CHHHHHHHHHHHHHHHTTTSCCCEEEESCHHHHHHHHHHCTTSCEEEEES
T ss_pred CHHHHHHHHHhcCCEEEEE-ECCCCC----cchHHHHHHHHHHHHHhcCcCCEEEEcCCHHHHHHHHHHCCCCCEEEEec
Confidence 78888887642 344 353322 1122334455555543 243433 2 234444444432
Q ss_pred -hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 -AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 -~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
...++.+.++.+|++.|-++-..++ .++|+.++++|++|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~ 212 (247)
T 2otd_A 171 EWRDDWRELTARLGCVSIHLNHKLLD------KARVMQLKDAGLRILV 212 (247)
T ss_dssp SCCTTHHHHHHHHTCSEEEEEGGGCC------HHHHHHHHHTTCEEEE
T ss_pred CCcccHHHHHHHcCCeEEecChHhCC------HHHHHHHHHCCCEEEE
Confidence 1134567789999999888765442 4689999999988654
No 453
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=47.56 E-value=9.2 Score=32.97 Aligned_cols=65 Identities=17% Similarity=0.060 Sum_probs=51.9
Q ss_pred HHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 77 KRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 77 ~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
+.++++|| .+. .|-..++|+.+- ...+.++||+.+=++|.+-+.+++.....++.++..|-.+.+
T Consensus 98 ~~L~~~gi~~lvi~Gv~T~~CV~~T-------a~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~~ 164 (208)
T 1yac_A 98 KAVKATGKKQLIIAGVVTEVCVAFP-------ALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMT 164 (208)
T ss_dssp HHHHHTTCSEEEEEEBSCCCCCHHH-------HHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHhcCCCEEEEEEeccchhHHHH-------HHHHHHCCCEEEEECcccCCCCHHHHHHHHHHHHHcCCEEee
Confidence 45678888 344 477788888775 444668899999999999999999999999999998776554
No 454
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=47.52 E-value=23 Score=36.45 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=36.3
Q ss_pred HHHHHHcCCCEEEecC----------------------Cccc---------C-C-------hhHHHHHHHHHHHcCCccc
Q 022296 107 VEDCKQVGFDTIELNV----------------------GSLE---------I-P-------EETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 107 l~~~k~lGF~~IEISd----------------------Gti~---------i-~-------~~~r~~lI~~~~~~G~~v~ 147 (299)
+.++|+|||++|+++= |.-. . + .++..++|+.+.++|++|+
T Consensus 211 l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~Vi 290 (750)
T 1bf2_A 211 ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY 290 (750)
T ss_dssp HHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCCEEE
Confidence 7888999999999861 2211 1 1 6899999999999999998
Q ss_pred ceeee
Q 022296 148 PKFAV 152 (299)
Q Consensus 148 ~E~gv 152 (299)
-.+-.
T Consensus 291 lDvV~ 295 (750)
T 1bf2_A 291 MDVVY 295 (750)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 87755
No 455
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=47.48 E-value=18 Score=36.47 Aligned_cols=50 Identities=10% Similarity=0.069 Sum_probs=37.4
Q ss_pred HHHHHH--HHHHcCCCEEEecCCcc--------------------------cC-----ChhHHHHHHHHHHHcCCcccce
Q 022296 103 FKEYVE--DCKQVGFDTIELNVGSL--------------------------EI-----PEETLLRYVRLVKSAGLKAKPK 149 (299)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGti--------------------------~i-----~~~~r~~lI~~~~~~G~~v~~E 149 (299)
+.+-|+ ++++|||++|.+|==+- .+ +.++..+||+.++++|++|+-.
T Consensus 57 i~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD 136 (683)
T 3bmv_A 57 IINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIID 136 (683)
T ss_dssp HHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 334477 78999999999984111 11 2678999999999999999877
Q ss_pred eee
Q 022296 150 FAV 152 (299)
Q Consensus 150 ~gv 152 (299)
+-.
T Consensus 137 ~V~ 139 (683)
T 3bmv_A 137 FAP 139 (683)
T ss_dssp ECT
T ss_pred Ecc
Confidence 633
No 456
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=47.45 E-value=14 Score=37.08 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHcCCCEEEecC----------CcccCChhHHHHHHHHHHHcCCccccee
Q 022296 102 AFKEYVEDCKQVGFDTIELNV----------GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISd----------Gti~i~~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
..++=++.+|++||++|-++- |.. +.+...++|+.++++|++|.-.+
T Consensus 15 ~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~--d~~~ld~~ld~a~~~Gi~vil~~ 71 (645)
T 1kwg_A 15 RWKEDARRMREAGLSHVRIGEFAWALLEPEPGRL--EWGWLDEAIATLAAEGLKVVLGT 71 (645)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBC--CCHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeeechhhcCCCCCcc--ChHHHHHHHHHHHHCCCEEEEeC
Confidence 556667777788888887753 222 23345577888888888877543
No 457
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=47.29 E-value=82 Score=28.65 Aligned_cols=86 Identities=9% Similarity=0.060 Sum_probs=58.7
Q ss_pred hhHHHHHHHhhccc-ccEEEeeCcccccCCh------------hHHHHHHHHHHhCCceecC-CcHH-------HHHHHh
Q 022296 40 HNVLEDIFESMGQF-VDGLKFSGGSHSLMPK------------PFIEEVVKRAHQHDVYVST-GDWA-------EHLIRN 98 (299)
Q Consensus 40 ~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~------------~~l~eKI~l~~~~gV~v~~-Gtlf-------E~a~~q 98 (299)
++.+.++|+-+.++ ||++-++--+..++.. +.+++--++++++|+.++. +.++ +-....
T Consensus 60 l~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py~iNL~S~~~e~re~ 139 (301)
T 2j6v_A 60 LRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQYVNPGSPDPEVVER 139 (301)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCTTCCTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCchhhcCCCCCHHHHHH
Confidence 34566667666555 9999998777666643 5677888899999996655 2332 122222
Q ss_pred CCchHHHHHHHHHHcCCC--EEEecCCcc
Q 022296 99 GPSAFKEYVEDCKQVGFD--TIELNVGSL 125 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~--~IEISdGti 125 (299)
.-..+.+-++.|..+|.+ .+=+--|+.
T Consensus 140 Si~~l~~~l~~a~~lG~~~a~~v~HpG~~ 168 (301)
T 2j6v_A 140 SLAELRYSARLLSLLGAEDGVLVLHLGGA 168 (301)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEECCCcC
Confidence 112577888999999976 888888864
No 458
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=47.17 E-value=60 Score=29.01 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=38.3
Q ss_pred ChhHHHHHHHHHHhCCceecC---CcHHHHHHHhCCchHHHHHHHHHHcCCC-EEEecCCcc--cCChhHHHHHHHHHHH
Q 022296 68 PKPFIEEVVKRAHQHDVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVGFD-TIELNVGSL--EIPEETLLRYVRLVKS 141 (299)
Q Consensus 68 p~~~l~eKI~l~~~~gV~v~~---GtlfE~a~~qg~~~~~~yl~~~k~lGF~-~IEISdGti--~i~~~~r~~lI~~~~~ 141 (299)
+++.+++.+++++++|+++.. ++.-|.. . .++++++.+++.|++ .+-++-++. +-+.+...+.++++++
T Consensus 196 ~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~--~---~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~ 270 (403)
T 2qt3_A 196 VEGSLDLCFKLAKEYDVDIDYHIHDIGTVGV--Y---SINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKD 270 (403)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCCHHHHH--H---HHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCeEEEeCCcccchh--H---HHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHH
Confidence 346677888888888876654 3433321 1 355667777777761 111221111 0011112356777777
Q ss_pred cCCcc
Q 022296 142 AGLKA 146 (299)
Q Consensus 142 ~G~~v 146 (299)
.|..+
T Consensus 271 ~g~~v 275 (403)
T 2qt3_A 271 SGMKF 275 (403)
T ss_dssp HTCEE
T ss_pred cCCEE
Confidence 66553
No 459
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=47.15 E-value=14 Score=37.36 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.5
Q ss_pred HHHHHH--HHHHcCCCEEEecCCc------------------------ccC-----ChhHHHHHHHHHHHcCCcccceee
Q 022296 103 FKEYVE--DCKQVGFDTIELNVGS------------------------LEI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 103 ~~~yl~--~~k~lGF~~IEISdGt------------------------i~i-----~~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
+.+-|+ ++++|||++|.+|==+ -.+ +.++..+||+.++++|++|+-.+-
T Consensus 54 i~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 54 IINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp HHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 334477 7899999999998311 111 368899999999999999987763
Q ss_pred e
Q 022296 152 V 152 (299)
Q Consensus 152 v 152 (299)
.
T Consensus 134 ~ 134 (680)
T 1cyg_A 134 P 134 (680)
T ss_dssp T
T ss_pred C
Confidence 3
No 460
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=47.14 E-value=25 Score=33.49 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=39.5
Q ss_pred chHHHHHHHHHHcCCCEEEec---CC----------------cccCC---------hhHHHHHHHHHHHcCCcccceeee
Q 022296 101 SAFKEYVEDCKQVGFDTIELN---VG----------------SLEIP---------EETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~~IEIS---dG----------------ti~i~---------~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
..+++.++.++++|+++|.+- || ..+++ .+..-++|..|+++|++|+--+.-
T Consensus 43 ~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 43 RMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 468999999999999999873 33 22211 445568999999999999887753
No 461
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=47.06 E-value=95 Score=29.38 Aligned_cols=33 Identities=12% Similarity=0.251 Sum_probs=24.8
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhH
Q 022296 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEET 131 (299)
Q Consensus 99 g~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~ 131 (299)
+++..++.++.+++.||.++=+--.+-.....+
T Consensus 133 d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~ 165 (352)
T 3sgz_A 133 DWDFNKQMVQRAEALGFKALVITIDTPVLGNRR 165 (352)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcch
Confidence 334578999999999999998877665554433
No 462
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=47.05 E-value=38 Score=31.28 Aligned_cols=130 Identities=8% Similarity=0.055 Sum_probs=72.8
Q ss_pred HHHHHHHhhcccccEE-EeeCcccccCChhHHHHHHHHHHhCCceecC----CcHHHHHHHhCCchHHHHHHHHHHcCCC
Q 022296 42 VLEDIFESMGQFVDGL-KFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (299)
Q Consensus 42 ~l~DlLe~ag~yID~l-Kfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~----GtlfE~a~~qg~~~~~~yl~~~k~lGF~ 116 (299)
..++.++.-++-||+. .+|-+...- -.+.+.+.++.||++|+++.. |.=+ ..+++.+..-.+.+.++|-|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~-~l~~i~~v~~~a~~~GlpvIie~~~G~~~----~~d~e~i~~aariA~elGAD 204 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQ-SIKNIIQLVDAGMKVGMPTMAVTGVGKDM----VRDQRYFSLATRIAAEMGAQ 204 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHH-HHHHHHHHHHHHHTTTCCEEEEECC--------CCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHH-HHHHHHHHHHHHHHcCCEEEEECCCCCcc----CCCHHHHHHHHHHHHHhCCC
Confidence 6788888777777764 333111111 112366888889999986542 2111 12223345566778899999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcccCCCccchhhhhh
Q 022296 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEVGVGIN 196 (299)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (299)
.|-.+- +.+.. +++.+.. . +.+.... +. . .+.++.
T Consensus 205 ~VKt~~-----t~e~~----~~vv~~~-~----vPVv~~G------G~----------------------~-~~~~~~-- 239 (295)
T 3glc_A 205 IIKTYY-----VEKGF----ERIVAGC-P----VPIVIAG------GK----------------------K-LPEREA-- 239 (295)
T ss_dssp EEEEEC-----CTTTH----HHHHHTC-S----SCEEEEC------CS----------------------C-CCHHHH--
T ss_pred EEEeCC-----CHHHH----HHHHHhC-C----CcEEEEE------CC----------------------C-CCHHHH--
Confidence 998882 12222 3333221 1 2222111 11 0 013456
Q ss_pred hHHHHHHHHHccCcEEEEeccccccCC
Q 022296 197 KSRRAERCLEAGADMIMIDSDDVCKHA 223 (299)
Q Consensus 197 ~i~~~~~dLeAGA~~VIiEargi~d~~ 223 (299)
.+.++..+++||+-|++ +|.||...
T Consensus 240 -l~~v~~ai~aGA~Gv~v-GRnI~q~~ 264 (295)
T 3glc_A 240 -LEMCWQAIDQGASGVDM-GRNIFQSD 264 (295)
T ss_dssp -HHHHHHHHHTTCSEEEE-SHHHHTSS
T ss_pred -HHHHHHHHHhCCeEEEe-HHHHhcCc
Confidence 78889999999997776 78788775
No 463
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=47.02 E-value=47 Score=31.33 Aligned_cols=66 Identities=15% Similarity=0.085 Sum_probs=41.9
Q ss_pred HcCCCEEEecCCcc------cC--ChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 112 QVGFDTIELNVGSL------EI--PEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 112 ~lGF~~IEISdGti------~i--~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
+.|+|+|||+-++= .+ +.+...++++.+++.- -+| +.+|-. |.
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~P-V~vKi~-----------------p~--------- 203 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHS-FGVKMP-----------------PY--------- 203 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSC-EEEEEC-----------------CC---------
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCC-eEEEec-----------------CC---------
Confidence 46899999998742 22 4577788888888741 133 556522 21
Q ss_pred cCCCccchhhhhhhHHHHHHHHHcc-CcEEEE
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAG-ADMIMI 214 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAG-A~~VIi 214 (299)
++.+++ .+.++...++| |+.|++
T Consensus 204 -----~d~~~~---~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 204 -----FDFAHF---DAAAEILNEFPKVQFITC 227 (354)
T ss_dssp -----CSHHHH---HHHHHHHHTCTTEEEEEE
T ss_pred -----CCHHHH---HHHHHHHHhCCCccEEEE
Confidence 123445 55566677898 999984
No 464
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=46.99 E-value=49 Score=31.30 Aligned_cols=25 Identities=4% Similarity=-0.041 Sum_probs=19.4
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEEeccc
Q 022296 191 VGVGINKSRRAERCLEAGADMIMIDSDD 218 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIiEarg 218 (299)
.++. ++.++..-++|+++|-+=+++
T Consensus 265 ~~~~---~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 265 EALT---KHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp HHHH---HHHHHHHGGGCCSEEEEECSC
T ss_pred HHHH---HHHHHHHHHhCCCEEEEcCCC
Confidence 5566 777788788999999887654
No 465
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=46.97 E-value=19 Score=36.30 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCEEEecC-------------------Ccc---------cCC------hhHHHHHHHHHHHcCCcccceee
Q 022296 106 YVEDCKQVGFDTIELNV-------------------GSL---------EIP------EETLLRYVRLVKSAGLKAKPKFA 151 (299)
Q Consensus 106 yl~~~k~lGF~~IEISd-------------------Gti---------~i~------~~~r~~lI~~~~~~G~~v~~E~g 151 (299)
-+.++|+|||++|+++= |.- ... .++..++|+.+.++|++|+-.+-
T Consensus 184 ~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 184 MINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 47888999999999871 221 122 58999999999999999988875
Q ss_pred e
Q 022296 152 V 152 (299)
Q Consensus 152 v 152 (299)
.
T Consensus 264 ~ 264 (657)
T 2wsk_A 264 L 264 (657)
T ss_dssp C
T ss_pred e
Confidence 5
No 466
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A
Probab=46.93 E-value=39 Score=30.57 Aligned_cols=71 Identities=18% Similarity=0.276 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHhCCceecC--CcH----HHHHHHhCCch----HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHH
Q 022296 70 PFIEEVVKRAHQHDVYVST--GDW----AEHLIRNGPSA----FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLV 139 (299)
Q Consensus 70 ~~l~eKI~l~~~~gV~v~~--Gtl----fE~a~~qg~~~----~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~ 139 (299)
..+++.++.+|..|++|.. ||| |-.++ .++.+ ++.-++.+++.|||.|.|.=-...-..+....+++.+
T Consensus 52 ~~~~~~~~k~~~~~lkvllsiGG~~~~~~~~~~-~~~~~r~~fi~si~~~~~~~~~DGiDiDwE~~p~~~~~~~~ll~eL 130 (312)
T 3fnd_A 52 KRIESVRETAHKHNVKILISLAKNSPGEFTTAI-NDPKARKELIQQIIAFTKEYKLDGFDIDYEEYDNWDKNFPSLLVFA 130 (312)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEESSTTHHHHHH-HSHHHHHHHHHHHHHHHHHTTCSEEEECCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEcCCCCchhhHHh-CCHHHHHHHHHHHHHHHHHcCCCeEEEeeeeCCCchHHHHHHHHHH
Confidence 4578888889999998775 665 22222 22223 5556678899999999996321111125566677766
Q ss_pred HH
Q 022296 140 KS 141 (299)
Q Consensus 140 ~~ 141 (299)
++
T Consensus 131 r~ 132 (312)
T 3fnd_A 131 RG 132 (312)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 467
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=46.92 E-value=31 Score=31.53 Aligned_cols=43 Identities=7% Similarity=-0.011 Sum_probs=29.8
Q ss_pred hccCCCceEEecCC-chhHHHHHHHhCCCcccc-cCCCCchhhhhhh
Q 022296 236 GRLGLEKTMFEATN-PRTSEWFIRRYGPKVNLF-VDHSQVMDLECLR 280 (299)
Q Consensus 236 ~~l~~eklifEAP~-k~qQ~~fI~~fG~~VNLg-I~~~eVi~LE~LR 280 (299)
..-|.+-|..|++. .++-..|-+.+.-=+|+- .+ ..+.++.|.
T Consensus 178 ~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~n~~~~~--~~~~~~eL~ 222 (275)
T 2ze3_A 178 ADAGADGIFVPLALQSQDIRALADALRVPLNVMAFP--GSPVPRALL 222 (275)
T ss_dssp HHTTCSEEECTTCCCHHHHHHHHHHCSSCEEEECCT--TSCCHHHHH
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHhcCCCEEEecCC--CCCCHHHHH
Confidence 34588999999975 577888888887557765 33 345556554
No 468
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=46.81 E-value=1.2e+02 Score=28.46 Aligned_cols=55 Identities=25% Similarity=0.266 Sum_probs=34.7
Q ss_pred ccEEEeeCcccccCChhHHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 022296 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (299)
Q Consensus 54 ID~lKfg~GTs~l~p~~~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEIS 121 (299)
+|++=+. ++.-+| +.+.+.|+.++++ ++++..|+- . . .+..+.+.+.|.|+|-|+
T Consensus 166 ~d~i~i~--~~~g~~-~~~~e~i~~ir~~~~~~pviv~~v-------~--~-~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 166 VDILVID--SAHGHS-TRIIELIKKIKTKYPNLDLIAGNI-------V--T-KEAALDLISVGADCLKVG 222 (404)
T ss_dssp CSEEEEC--CSCCSS-HHHHHHHHHHHHHCTTCEEEEEEE-------C--S-HHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEe--CCCCCh-HHHHHHHHHHHHHCCCCeEEEcCC-------C--c-HHHHHHHHhcCCCEEEEC
Confidence 5666552 111234 5678888888887 888875321 0 1 234566778999999994
No 469
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=46.76 E-value=77 Score=28.39 Aligned_cols=38 Identities=11% Similarity=0.164 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHcCCC--EEEecCCc----ccCChhHHHHHHHHHHHc
Q 022296 101 SAFKEYVEDCKQVGFD--TIELNVGS----LEIPEETLLRYVRLVKSA 142 (299)
Q Consensus 101 ~~~~~yl~~~k~lGF~--~IEISdGt----i~i~~~~r~~lI~~~~~~ 142 (299)
..+.+-++.+.+.|.| ++-|.||. +++..+ +|+.+++.
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~----~v~~lr~~ 83 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPM----VLKALRDY 83 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHH----HHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHH----HHHHHHHh
Confidence 3678889999999998 67778887 566653 45555553
No 470
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=46.70 E-value=25 Score=36.15 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCEEEecCC----------------------------------cccC-----ChhHHHHHHHHHHHcC
Q 022296 103 FKEYVEDCKQVGFDTIELNVG----------------------------------SLEI-----PEETLLRYVRLVKSAG 143 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdG----------------------------------ti~i-----~~~~r~~lI~~~~~~G 143 (299)
+.+-|.++++|||++|+++-- ...+ +.++..++|+.+.++|
T Consensus 255 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~G 334 (695)
T 3zss_A 255 AARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLG 334 (695)
T ss_dssp HGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCC
Confidence 334478999999999998731 1122 2489999999999999
Q ss_pred Ccccceeeee
Q 022296 144 LKAKPKFAVM 153 (299)
Q Consensus 144 ~~v~~E~gvK 153 (299)
++|+-.+-..
T Consensus 335 I~VilD~V~N 344 (695)
T 3zss_A 335 LEIALDFALQ 344 (695)
T ss_dssp CEEEEEECCE
T ss_pred CEEEEEeecc
Confidence 9999777553
No 471
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=46.66 E-value=19 Score=32.36 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC----------------------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEI----------------------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i----------------------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+++.++.+|++||++|-|.-..-.+ ..+...++|+.++++|++|+-++.-
T Consensus 45 ~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 45 DYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hHHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 47889999999999999886331111 1223467899999999999988875
No 472
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=46.62 E-value=22 Score=38.63 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=36.4
Q ss_pred HHHHHHcCCCEEEecCCccc--------------------------C-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 107 VEDCKQVGFDTIELNVGSLE--------------------------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 107 l~~~k~lGF~~IEISdGti~--------------------------i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.++++||+++||++==+-. + +.++..++|+.++++|++|+-.+-.
T Consensus 692 ldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~ 768 (1039)
T 3klk_A 692 ADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVP 768 (1039)
T ss_dssp HHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 67889999999999643222 1 2468999999999999999987755
No 473
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=46.48 E-value=1.7e+02 Score=26.48 Aligned_cols=53 Identities=9% Similarity=-0.094 Sum_probs=34.5
Q ss_pred HHHHHHHHHccCcEEEEecccc--cc-------------CCCcccHHHHHHHHhccCCCceEEecCCch
Q 022296 198 SRRAERCLEAGADMIMIDSDDV--CK-------------HADSLRADIIAKVIGRLGLEKTMFEATNPR 251 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEargi--~d-------------~~G~~r~d~i~~ii~~l~~eklifEAP~k~ 251 (299)
.+++++.++.|.+.-+- .=|+ |. ....-+.+.+.++++..++++|+.|..-+.
T Consensus 203 ~e~a~~~~~~G~~i~~~-~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~ 270 (330)
T 2ob3_A 203 LSYLTALAARGYLIGLD-HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTF 270 (330)
T ss_dssp HHHHHHHHHTTCEEEEC-CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred HHHHHHHHhCCCEEEeC-CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 45668999999765443 1122 20 011134567888999999999999986553
No 474
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=46.46 E-value=43 Score=31.25 Aligned_cols=41 Identities=12% Similarity=0.263 Sum_probs=34.3
Q ss_pred HHHHHHHHHccCcEEEEec-----cccccCCCcccHHHHHHHHhcc
Q 022296 198 SRRAERCLEAGADMIMIDS-----DDVCKHADSLRADIIAKVIGRL 238 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEa-----rgi~d~~G~~r~d~i~~ii~~l 238 (299)
+..+...+.+||+-+|||- +-++|..-.+..+.++++++.+
T Consensus 243 ~~~a~AAvAlGAdGl~IE~H~tpd~al~D~~~sl~p~el~~lv~~i 288 (298)
T 3fs2_A 243 ETLARAAVAVGVAGFFIETHEDPDNAPSDGPNMVPIDKMPALLEKL 288 (298)
T ss_dssp HHHHHHHHHHCCSEEEEEEESSGGGCSSSGGGCEEGGGHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCChhccCCchhhcCCHHHHHHHHHHH
Confidence 5667889999999999998 3678888888888888888654
No 475
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=46.43 E-value=91 Score=28.27 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.0
Q ss_pred HHHHHHHHHccCcEEEEecc
Q 022296 198 SRRAERCLEAGADMIMIDSD 217 (299)
Q Consensus 198 i~~~~~dLeAGA~~VIiEar 217 (299)
-++++..+++|||-|||=+-
T Consensus 220 ~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 220 PAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp HHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEEECHH
Confidence 45567789999999999663
No 476
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=46.30 E-value=73 Score=29.39 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=78.5
Q ss_pred HHHHcCCCEEEecCC----------cccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCcc
Q 022296 109 DCKQVGFDTIELNVG----------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRST 178 (299)
Q Consensus 109 ~~k~lGF~~IEISdG----------ti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~ 178 (299)
.+.+.|||+|=+.|. +..++.++-+...+.+.+. -. .|=+-. |+|. +.|
T Consensus 32 l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~-~~-~~~vva-----D~pf------gsy-------- 90 (275)
T 1o66_A 32 LMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARG-AK-NAMIVS-----DLPF------GAY-------- 90 (275)
T ss_dssp HHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHH-CS-SSEEEE-----ECCT------TSS--------
T ss_pred HHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhh-CC-CCeEEE-----ECCC------CCc--------
Confidence 345689999965432 3568889988888887772 00 011112 2221 111
Q ss_pred chhcccCCCccchhhhhhhHHHHHHHHHccCcEEEEecc-------------cc------------------ccCCCcc-
Q 022296 179 DKLFLASNPEIEVGVGINKSRRAERCLEAGADMIMIDSD-------------DV------------------CKHADSL- 226 (299)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIiEar-------------gi------------------~d~~G~~- 226 (299)
..++++. ++.+.+.+++||+.|-+|+- || |.-.|+-
T Consensus 91 ---------~~s~~~a---~~na~rl~kaGa~aVklEdg~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~ 158 (275)
T 1o66_A 91 ---------QQSKEQA---FAAAAELMAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGG 158 (275)
T ss_dssp ---------SSCHHHH---HHHHHHHHHTTCSEEEEECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------
T ss_pred ---------cCCHHHH---HHHHHHHHHcCCcEEEECCcHHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChH
Confidence 0126777 99999999999999999984 32 1111211
Q ss_pred -cHHHHHHH--HhccCCCceEEecCCchhHHHHHHHhCCCccc-c---cCCCCchhhhhh
Q 022296 227 -RADIIAKV--IGRLGLEKTMFEATNPRTSEWFIRRYGPKVNL-F---VDHSQVMDLECL 279 (299)
Q Consensus 227 -r~d~i~~i--i~~l~~eklifEAP~k~qQ~~fI~~fG~~VNL-g---I~~~eVi~LE~L 279 (299)
-.++++.- +..-|.+-|..|+...++-..+-+....=+|- | ---.||+-..-|
T Consensus 159 ~a~~~i~rA~a~~eAGA~~ivlE~vp~~~a~~it~~l~iP~igIGaG~~~dgQvLV~~D~ 218 (275)
T 1o66_A 159 KAQALLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDM 218 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHCSSCEEEESSCSCSSEEEECHHHH
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHhCCCCEEEECCCCCCCcceeeHHhh
Confidence 12333322 25678999999997655555555655433332 2 223466655533
No 477
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=46.15 E-value=26 Score=32.24 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=44.6
Q ss_pred CCceecC-C-cH--HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------hhHHHHHHHHHHHcCCccccee
Q 022296 82 HDVYVST-G-DW--AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------EETLLRYVRLVKSAGLKAKPKF 150 (299)
Q Consensus 82 ~gV~v~~-G-tl--fE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~-------~~~r~~lI~~~~~~G~~v~~E~ 150 (299)
.|=+++. | .+ .+.....+ .-.+++++.+|++||++|-++-..-.+. .+...++|+.+.+.|+.|+-++
T Consensus 63 nG~~~~l~Gvn~~~~~~~~~~g-~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 63 QGKTIVFRGVNISDPDKIDKDK-RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp TCCEECCEEEEECCHHHHHHTT-CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEEecCCcccCCCCC-CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 3555555 5 22 23333333 1237889999999999999973321110 0112578999999999999877
Q ss_pred ee
Q 022296 151 AV 152 (299)
Q Consensus 151 gv 152 (299)
.-
T Consensus 142 H~ 143 (359)
T 4hty_A 142 HS 143 (359)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 478
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=46.02 E-value=61 Score=29.65 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=42.8
Q ss_pred chhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhCCceecC--C-----cHHHHHHHhCCchHHHHHHHHH
Q 022296 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--G-----DWAEHLIRNGPSAFKEYVEDCK 111 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~--G-----tlfE~a~~qg~~~~~~yl~~~k 111 (299)
+...++.+.+.|-+| |+.+-.++| ..++.--+.++..+|.+++ | +..|.-+.. .+++-
T Consensus 57 t~~~I~~lc~eA~~~------~~aaVCV~p-~~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~E--------a~~Ai 121 (260)
T 3r12_A 57 TPDDIKKLCLEAREN------RFHGVCVNP-CYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHE--------AIFAV 121 (260)
T ss_dssp CHHHHHHHHHHHHHT------TCSEEEECG-GGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHH--------HHHHH
T ss_pred CHHHHHHHHHHHHhc------CCcEEEECH-HHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHH--------HHHHH
Confidence 566777777777765 665555544 5577777777777887765 3 122222211 45667
Q ss_pred HcCCCEEEec
Q 022296 112 QVGFDTIELN 121 (299)
Q Consensus 112 ~lGF~~IEIS 121 (299)
+.|-|.|.+-
T Consensus 122 ~~GAdEIDmV 131 (260)
T 3r12_A 122 ESGADEIDMV 131 (260)
T ss_dssp HHTCSEEEEE
T ss_pred HcCCCEEEEE
Confidence 7899999864
No 479
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=46.01 E-value=1.1e+02 Score=24.59 Aligned_cols=85 Identities=24% Similarity=0.424 Sum_probs=52.5
Q ss_pred cEEEeeCcccccCChhHHHHHHHHHHhCCcee--cC-CcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----
Q 022296 55 DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--ST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----- 126 (299)
Q Consensus 55 D~lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v--~~-GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~----- 126 (299)
+.+-|.+|=-.+.| +.+.+.++.++++|+.+ .| |++.+ +.++.+.+. .+.|-||=-..+
T Consensus 5 ~~v~~tGGEPll~~-~~~~~l~~~~~~~g~~~~l~TNG~l~~-----------~~~~~l~~~-~d~v~isld~~~~~~~~ 71 (182)
T 3can_A 5 GGVTFCGGEPLLHP-EFLIDILKRCGQQGIHRAVDTTLLARK-----------ETVDEVMRN-CELLLIDLKSMDSTVHQ 71 (182)
T ss_dssp CCEEECSSTGGGSH-HHHHHHHHHHHHTTCCEEEECTTCCCH-----------HHHHHHHHT-CSEEEEECCCSCHHHHH
T ss_pred CEEEEEcccccCCH-HHHHHHHHHHHHCCCcEEEECCCCCCH-----------HHHHHHHhh-CCEEEEECCCCCHHHHH
Confidence 45667778777765 55689999999988744 45 66432 223333444 677877743331
Q ss_pred ----CChhHHHHHHHHHHHcCCcccceeee
Q 022296 127 ----IPEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 127 ----i~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
.+.+.-.+.|+.+++.|..+.-.+.+
T Consensus 72 ~~~g~~~~~i~~~i~~l~~~g~~v~i~~~v 101 (182)
T 3can_A 72 TFCDVPNELILKNIRRVAEADFPYYIRIPL 101 (182)
T ss_dssp HHHSSCSHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHhCCCHHHHHHHHHHHHhCCCeEEEEEEE
Confidence 23355567788888888765544443
No 480
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=45.88 E-value=29 Score=32.27 Aligned_cols=69 Identities=16% Similarity=0.271 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCce-ecCC---------cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC----------Ccc-cCChh
Q 022296 72 IEEVVKRAHQHDVY-VSTG---------DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV----------GSL-EIPEE 130 (299)
Q Consensus 72 l~eKI~l~~~~gV~-v~~G---------tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd----------Gti-~i~~~ 130 (299)
+.++++.++++|.. |-.. .+-+. . ..++++.+.|++.|+..+-++. |.+ .-+.+
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~---~--~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~ 109 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAER---E--KILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRS 109 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHH---H--HHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhh---H--HHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHH
Confidence 89999999999973 2111 11111 1 2688999999999998776643 222 22333
Q ss_pred H-------HHHHHHHHHHcCCc
Q 022296 131 T-------LLRYVRLVKSAGLK 145 (299)
Q Consensus 131 ~-------r~~lI~~~~~~G~~ 145 (299)
. -.+.|+.+++.|-+
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~ 131 (394)
T 1xla_A 110 IRRFALAKVLHNIDLAAEMGAE 131 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 2 35677778887765
No 481
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=45.30 E-value=96 Score=28.93 Aligned_cols=43 Identities=26% Similarity=0.383 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhC--CceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 022296 71 FIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (299)
Q Consensus 71 ~l~eKI~l~~~~--gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdG 123 (299)
.+.+.|+-++++ ++++..|+-. . .+-.+.+.+.|.|.|-||.|
T Consensus 147 ~~~~~i~~lr~~~~~~~vi~g~v~---------t-~e~A~~a~~aGaD~I~v~~g 191 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIMAGNVV---------T-GEMVEELILSGADIIKVGIG 191 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEEC---------S-HHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCC---------C-HHHHHHHHHhCCCEEEECCC
Confidence 355666666665 6766554310 1 12345678899999999874
No 482
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus}
Probab=45.27 E-value=54 Score=29.46 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhCCceecC--CcH----HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 022296 71 FIEEVVKRAHQHDVYVST--GDW----AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (299)
Q Consensus 71 ~l~eKI~l~~~~gV~v~~--Gtl----fE~a~~qg~~----~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~ 140 (299)
.+.+.|..+|+.|++|.. ||| |..+ ...+. -++...+.+++.|||.|.|.=-.- -+.+....+++.++
T Consensus 73 ~~~~~i~~~k~~g~kvllSiGG~~~~~fs~~-~~~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p-~~~~~~~~ll~~Lr 150 (290)
T 2y8v_A 73 PLWAEVPVLKRSGVKVMGMLGGAAQGSYRCL-DGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEE-MSLPGIIRLIDRLK 150 (290)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSSTTTTGGG-SSCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC-BCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCchhc-cCCHHHHHHHHHHHHHHHHHhCCCeEEEccccc-chHHHHHHHHHHHH
Confidence 478889999999997765 766 2211 11111 256777888999999999974331 23467777888777
Q ss_pred H
Q 022296 141 S 141 (299)
Q Consensus 141 ~ 141 (299)
+
T Consensus 151 ~ 151 (290)
T 2y8v_A 151 L 151 (290)
T ss_dssp H
T ss_pred H
Confidence 7
No 483
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=45.00 E-value=15 Score=33.31 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=41.5
Q ss_pred hhHHHHHHHhhcccccE-------EEeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHH
Q 022296 40 HNVLEDIFESMGQFVDG-------LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQ 112 (299)
Q Consensus 40 ~~~l~DlLe~ag~yID~-------lKfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~ 112 (299)
....+.+.+.-.+.|+. .|...|+..+-..+.|++. .+..++++..+... + . .+..+.+.+
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I---~~~~~iPv~~k~r~------g--~-~~~~~~~~a 98 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEV---MNAVSIPVMAKARI------G--H-IVEARVLEA 98 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHH---HHHCSSCEEEEECT------T--C-HHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHH---HHhCCCCEEecccc------c--c-hHHHHHHHH
Confidence 34566666655676743 3555665555555555543 45678876543210 0 0 244566777
Q ss_pred cCCCEEEecCCcccCChhH
Q 022296 113 VGFDTIELNVGSLEIPEET 131 (299)
Q Consensus 113 lGF~~IEISdGti~i~~~~ 131 (299)
.|.|.|- ++-.++.++
T Consensus 99 ~GAd~V~---~~~~l~~~~ 114 (305)
T 2nv1_A 99 MGVDYID---ESEVLTPAD 114 (305)
T ss_dssp HTCSEEE---ECTTSCCSC
T ss_pred CCCCEEE---EeccCCHHH
Confidence 9999995 333445444
No 484
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=44.98 E-value=39 Score=32.32 Aligned_cols=106 Identities=12% Similarity=0.200 Sum_probs=70.5
Q ss_pred chhHHHHHHHhhccccc---EEEeeCcccccCChhHHHHHHHHHHhCCc-eecCC--cHHHHHH---HhC--CchHHHHH
Q 022296 39 SHNVLEDIFESMGQFVD---GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVSTG--DWAEHLI---RNG--PSAFKEYV 107 (299)
Q Consensus 39 g~~~l~DlLe~ag~yID---~lKfg~GTs~l~p~~~l~eKI~l~~~~gV-~v~~G--tlfE~a~---~qg--~~~~~~yl 107 (299)
.+..++++++.+-.+.+ ...+...| -|...=.++++.++++|+ .++.| ++-+..+ .++ .+.+.+-+
T Consensus 119 ~~~~l~~ll~~i~~~~~~~~~~eitie~---~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai 195 (457)
T 1olt_A 119 NKAQISRLMKLLRENFQFNADAEISIEV---DPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALL 195 (457)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEEEEEEEE---CSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEE---ccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHH
Confidence 56789999999988644 34555433 333334689999999998 67767 5533333 111 12355667
Q ss_pred HHHHHcCCCE--EEecCCcccCChhHHHHHHHHHHHcCCccc
Q 022296 108 EDCKQVGFDT--IELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (299)
Q Consensus 108 ~~~k~lGF~~--IEISdGti~i~~~~r~~lI~~~~~~G~~v~ 147 (299)
+.+++.||+. +-+--|.-.-+.++..+.++.+.+.|..-+
T Consensus 196 ~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i 237 (457)
T 1olt_A 196 NHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRL 237 (457)
T ss_dssp HHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEE
T ss_pred HHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEE
Confidence 7888999973 444445555678888899999999876633
No 485
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=44.94 E-value=2e+02 Score=26.94 Aligned_cols=17 Identities=35% Similarity=0.534 Sum_probs=13.8
Q ss_pred HHHHHHHccCcEEEEec
Q 022296 200 RAERCLEAGADMIMIDS 216 (299)
Q Consensus 200 ~~~~dLeAGA~~VIiEa 216 (299)
.+.+.|++||+.|++=+
T Consensus 221 di~kala~GAd~V~vGs 237 (361)
T 3khj_A 221 DIGKALAVGASSVMIGS 237 (361)
T ss_dssp HHHHHHHHTCSEEEEST
T ss_pred HHHHHHHcCCCEEEECh
Confidence 34778999999999854
No 486
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=44.89 E-value=15 Score=32.06 Aligned_cols=80 Identities=19% Similarity=0.100 Sum_probs=57.6
Q ss_pred EEEeeCcccccCChhHHHHHHHHHHhCCc-eec-CCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 022296 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (299)
Q Consensus 56 ~lKfg~GTs~l~p~~~l~eKI~l~~~~gV-~v~-~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~ 133 (299)
+-|-.+..+ +..+ |. ++++++|| .+. .|-..++|+.+- .. .+.++||+.+=++|.+-+.+.+...
T Consensus 121 i~K~~~saF--~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~-----~a~~~Gy~v~vv~Da~~~~~~~~h~ 187 (211)
T 3o94_A 121 MDKRHYSAF--SGTD-LD---IRLRERRVSTVILTGVLTDISVLHT--AI-----DAYNLGYDIEIVKPAVASIWPENHQ 187 (211)
T ss_dssp EEESSSSSS--TTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHH
T ss_pred EEecccCcC--CCch-HH---HHHHhCCCCeEEEEeeccChHHHHH--HH-----HHHHCCCEEEEechhhcCCCHHHHH
Confidence 557655443 3322 44 34567788 344 477888888885 33 4568999999999999999999999
Q ss_pred HHHHHHHH-cCCcccc
Q 022296 134 RYVRLVKS-AGLKAKP 148 (299)
Q Consensus 134 ~lI~~~~~-~G~~v~~ 148 (299)
..++.+++ .|-.+.+
T Consensus 188 ~aL~~m~~~~G~~i~t 203 (211)
T 3o94_A 188 FALGHFKNTLGAKLVD 203 (211)
T ss_dssp HHHHHHHHTSCCEEEC
T ss_pred HHHHHHHHHCCcEEec
Confidence 99999998 6665443
No 487
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=44.63 E-value=20 Score=32.12 Aligned_cols=47 Identities=15% Similarity=-0.030 Sum_probs=28.9
Q ss_pred CchHHHHHHHHHH-c--CCCEEEecCCcccCChhHHHHHHHHHHHc--CCcccceeee
Q 022296 100 PSAFKEYVEDCKQ-V--GFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAV 152 (299)
Q Consensus 100 ~~~~~~yl~~~k~-l--GF~~IEISdGti~i~~~~r~~lI~~~~~~--G~~v~~E~gv 152 (299)
|+.++.|.+.+.+ + ||=+.+. .|. +. -.++|+++++. ...+.-.+|+
T Consensus 148 ~e~~~~~a~~g~~~l~~~~Vyl~~-~G~---~~--~~~~i~~i~~~~~~~Pv~vGgGI 199 (234)
T 2f6u_A 148 KELAASYALVGEKLFNLPIIYIEY-SGT---YG--NPELVAEVKKVLDKARLFYGGGI 199 (234)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEC-TTS---CC--CHHHHHHHHHHCSSSEEEEESCC
T ss_pred HHHHHHHHHhhhhhcCCCEEEEeC-CCC---cc--hHHHHHHHHHhCCCCCEEEEecC
Confidence 3458888888874 4 6766666 564 11 24677777775 3444445555
No 488
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=44.59 E-value=29 Score=31.13 Aligned_cols=81 Identities=16% Similarity=0.172 Sum_probs=55.7
Q ss_pred hHHHHHHHhhcccccEE-EeeCcccccCChhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 022296 41 NVLEDIFESMGQFVDGL-KFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (299)
Q Consensus 41 ~~l~DlLe~ag~yID~l-Kfg~GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IE 119 (299)
.+.++-++.-++=||++ =+|+-.+ .-.+.|++-.+.|+++|+++ --.+|.++.. ++.+..-.+.|.++|-|.|-
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~--~v~~ei~~v~~a~~~~g~~l--KvIlEt~~L~-~e~i~~a~ria~eaGADfVK 166 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPE--AVYREVSGIVKLAKSYGAVV--KVILEAPLWD-DKTLSLLVDSSRRAGADIVK 166 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHH--HHHHHHHHHHHHHHHTTCEE--EEECCGGGSC-HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEeccchHHHH--HHHHHHHHHHHHHhhcCCeE--EEEEeccCCC-HHHHHHHHHHHHHhCCCEEE
Confidence 46788888889999984 4555444 22346788888899988753 0011222222 24677788889999999999
Q ss_pred ecCCccc
Q 022296 120 LNVGSLE 126 (299)
Q Consensus 120 ISdGti~ 126 (299)
.|.|+..
T Consensus 167 TsTG~~~ 173 (234)
T 1n7k_A 167 TSTGVYT 173 (234)
T ss_dssp SCCSSSC
T ss_pred eCCCCCC
Confidence 9999864
No 489
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=44.54 E-value=18 Score=33.97 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=38.4
Q ss_pred cchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC
Q 022296 189 IEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG 239 (299)
Q Consensus 189 ~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~ 239 (299)
++++++ ++.+.+|.+|||..|=+=.|.=-+...+++.+...++++++-
T Consensus 45 vTpeEI---a~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR 92 (316)
T 3c6c_A 45 ITPAQI---ADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVR 92 (316)
T ss_dssp CSHHHH---HHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHH
Confidence 568999 999999999999999999995433445677777777775554
No 490
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=44.41 E-value=27 Score=32.08 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=25.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc--C----Ch--hHHHHHHHHHHHc
Q 022296 103 FKEYVEDCKQVGFDTIELNVGSLE--I----PE--ETLLRYVRLVKSA 142 (299)
Q Consensus 103 ~~~yl~~~k~lGF~~IEISdGti~--i----~~--~~r~~lI~~~~~~ 142 (299)
.+.+.+.+...|+++|||+-++.. + .. +...+.|+.+++.
T Consensus 129 ~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~ 176 (349)
T 1p0k_A 129 AAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSR 176 (349)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHH
Confidence 445556677889999999876531 0 11 1256778877763
No 491
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=44.33 E-value=27 Score=36.02 Aligned_cols=56 Identities=16% Similarity=0.389 Sum_probs=42.1
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-------------CChh----HHHHHHHHHHHcCCc
Q 022296 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-------------IPEE----TLLRYVRLVKSAGLK 145 (299)
Q Consensus 90 tlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISdGti~-------------i~~~----~r~~lI~~~~~~G~~ 145 (299)
+|--.....+.+.+.+.++.++++|+++|-|.||-.. .+++ -...+++.+++.||+
T Consensus 335 sW~~~~~~~~e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk 407 (720)
T 2yfo_A 335 SWEAAYFDFTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMK 407 (720)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCE
T ss_pred chHHhCcCCCHHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCE
Confidence 6765544334457999999999999999999998742 1111 266899999999998
No 492
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=44.12 E-value=55 Score=29.30 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=51.4
Q ss_pred HHHHHHHhhcccccEE-EeeC---cccccCChhHHHHHHHHHHhCCceecCCcHHHHHHH---hCCchHHHHHHHHHHcC
Q 022296 42 VLEDIFESMGQFVDGL-KFSG---GSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIR---NGPSAFKEYVEDCKQVG 114 (299)
Q Consensus 42 ~l~DlLe~ag~yID~l-Kfg~---GTs~l~p~~~l~eKI~l~~~~gV~v~~GtlfE~a~~---qg~~~~~~yl~~~k~lG 114 (299)
+.++-++.-++=||++ -+|+ |..-..-+ .|++..+.|+..-++|-. |.++. +.++.+..-.+.|.+.|
T Consensus 85 E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~-ei~~v~~a~~~~~lKvIi----Et~~L~~~~t~eei~~a~~ia~~aG 159 (231)
T 3ndo_A 85 EAELAVAAGATEIDMVIDVGAALAGDLDAVSA-DITAVRKAVRAATLKVIV----ESAALLEFSGEPLLADVCRVARDAG 159 (231)
T ss_dssp HHHHHHHTTCSEEEEECCHHHHHTTCHHHHHH-HHHHHHHHTTTSEEEEEC----CHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEEeehHhhhcccHHHHHH-HHHHHHHHccCCceEEEE----ECcccCCCCCHHHHHHHHHHHHHHC
Confidence 6777888888899976 4554 33322222 356666666533334433 33333 34456778888999999
Q ss_pred CCEEEecCCcc
Q 022296 115 FDTIELNVGSL 125 (299)
Q Consensus 115 F~~IEISdGti 125 (299)
-|.|--|.|+.
T Consensus 160 ADfVKTSTGf~ 170 (231)
T 3ndo_A 160 ADFVKTSTGFH 170 (231)
T ss_dssp CSEEECCCSCC
T ss_pred cCEEEcCCCCC
Confidence 99999999986
No 493
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=43.72 E-value=20 Score=37.40 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=36.3
Q ss_pred HHHHHHHcCCCEEEecCCcc---------------cC-----ChhHHHHHHHHHHHcCCcccceeee
Q 022296 106 YVEDCKQVGFDTIELNVGSL---------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 106 yl~~~k~lGF~~IEISdGti---------------~i-----~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
-++++++|||++|++|==+- .+ +.++..++|+.++++|++|+-.+-.
T Consensus 22 ~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV~ 88 (720)
T 1iv8_A 22 NLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIVP 88 (720)
T ss_dssp THHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHhCCCCEEEECCcccCCCCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 35688999999999973221 11 2678999999999999999887755
No 494
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=43.35 E-value=44 Score=29.16 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=60.1
Q ss_pred HHHHHHHhhcc-----cccEEEeeCcccccCChhHHHHHHHHHHhCCc----eecCC--cHHHHHHHhCCc---------
Q 022296 42 VLEDIFESMGQ-----FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVSTG--DWAEHLIRNGPS--------- 101 (299)
Q Consensus 42 ~l~DlLe~ag~-----yID~lKfg~GTs~l~p~~~l~eKI~l~~~~gV----~v~~G--tlfE~a~~qg~~--------- 101 (299)
.|+++|+.+.+ +|| +|-.. ...+...+..+++.++++. .++.- ..+..+-...|+
T Consensus 101 tL~evL~~~~~~~~~l~iE-iK~~~----~~~~~~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~ 175 (252)
T 2pz0_A 101 TLYEVFELIGDKDFLVNIE-IKSGI----VLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQC 175 (252)
T ss_dssp BHHHHHHHHTTSCCEEEEE-ECCSS----CCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECS
T ss_pred CHHHHHHHhhhcCCeEEEE-eCCCC----cccHHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecC
Confidence 78999988743 445 36321 1223456777888888874 23332 234444444332
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHcCCcccc
Q 022296 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (299)
Q Consensus 102 ~~~~yl~~~k~lGF~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~ 148 (299)
...++.+.++++|.+.+-++-..++ .++|+.++++|++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~i~~~~~~~~------~~~v~~~~~~G~~v~~ 216 (252)
T 2pz0_A 176 GLVEPWHMALRMEAYSLHPFYFNII------PELVEGCKKNGVKLFP 216 (252)
T ss_dssp BCSSTHHHHHHTTCSEEEEBGGGCC------HHHHHHHHHTTCEECC
T ss_pred ccccHHHHHHHcCCeEEecchhcCC------HHHHHHHHHCCCEEEE
Confidence 1234567788999999887754442 4789999999988654
No 495
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=43.20 E-value=1.3e+02 Score=26.86 Aligned_cols=128 Identities=18% Similarity=0.175 Sum_probs=71.8
Q ss_pred HHHHHHHhhcc----cccEEEeeCccc-ccCChhHHHHHHHHHHhC--Cc---eec-C---CcHHHHHHHhCCchHHHHH
Q 022296 42 VLEDIFESMGQ----FVDGLKFSGGSH-SLMPKPFIEEVVKRAHQH--DV---YVS-T---GDWAEHLIRNGPSAFKEYV 107 (299)
Q Consensus 42 ~l~DlLe~ag~----yID~lKfg~GTs-~l~p~~~l~eKI~l~~~~--gV---~v~-~---GtlfE~a~~qg~~~~~~yl 107 (299)
..+++++.+.. ..|++=+=.=-. -..+.+.+.+.+..++++ +. ..+ + ||-++ + .=++|+
T Consensus 30 t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~-----~--~~~~~~ 102 (258)
T 4h3d_A 30 NKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKL-----I--SRDYYT 102 (258)
T ss_dssp SHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCC-----C--CHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCC-----C--CHHHHH
Confidence 35666655432 345554432111 123445677777777764 33 122 2 55332 1 223333
Q ss_pred ---HHHHHcC-CCEEEecCCcccCChhHHHHHHHHHHHcCCcccceeeeecCCCCCCCcccccccccccCCCCccchhcc
Q 022296 108 ---EDCKQVG-FDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFL 183 (299)
Q Consensus 108 ---~~~k~lG-F~~IEISdGti~i~~~~r~~lI~~~~~~G~~v~~E~gvK~~~sevg~~~d~~~~~~~~~~~~~~~~~~~ 183 (299)
+.+-+.| +|+|.|- +..+.+...++++.+++.|-+++-=++- ...+++
T Consensus 103 ~ll~~~~~~~~~d~iDvE---l~~~~~~~~~l~~~a~~~~~kiI~S~Hd---f~~TP~---------------------- 154 (258)
T 4h3d_A 103 TLNKEISNTGLVDLIDVE---LFMGDEVIDEVVNFAHKKEVKVIISNHD---FNKTPK---------------------- 154 (258)
T ss_dssp HHHHHHHHTTCCSEEEEE---GGGCHHHHHHHHHHHHHTTCEEEEEEEE---SSCCCC----------------------
T ss_pred HHHHHHHhcCCchhhHHh---hhccHHHHHHHHHHHHhCCCEEEEEEec---CCCCCC----------------------
Confidence 3444455 7887664 4567888889999999988776544433 222211
Q ss_pred cCCCccchhhhhhhHHHHHHHHHccCcEEEE
Q 022296 184 ASNPEIEVGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 184 ~~~~~~~~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
.+++ ++...+..+.|||.|=|
T Consensus 155 -------~~el---~~~~~~~~~~gaDIvKi 175 (258)
T 4h3d_A 155 -------KEEI---VSRLCRMQELGADLPKI 175 (258)
T ss_dssp -------HHHH---HHHHHHHHHTTCSEEEE
T ss_pred -------HHHH---HHHHHHHHHhCCCEEEE
Confidence 3566 66677778899997544
No 496
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=43.19 E-value=20 Score=31.03 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=30.3
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCcccccCChhHHHHHHHHHHhC----Cce---------ecCCcH
Q 022296 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH----DVY---------VSTGDW 91 (299)
Q Consensus 25 GlT~V~DkGl~~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~l~eKI~l~~~~----gV~---------v~~Gtl 91 (299)
++..+.+=|+ + .+..++.+++. | .|.+ ..||.++.+++.+++..+.+-.. ++. |++-+|
T Consensus 79 ~ipvi~~Ggi--~-~~~~~~~~l~~-G--ad~V--~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~ 150 (247)
T 3tdn_A 79 TLPIIASGGA--G-KMEHFLEAFLR-G--ADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSG 150 (247)
T ss_dssp CSCEEEESCC--C-SHHHHHHHHHT-T--CSEE--CCSHHHHHCTHHHHHHHHHHC------------------------
T ss_pred CCCEEEeCCC--C-CHHHHHHHHHc-C--CCee--ehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCC
Confidence 5556665555 2 55677777753 4 5654 66788887777776666555211 221 222233
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022296 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 92 fE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (299)
.|..- ....++.+.+.++|++.|=+++
T Consensus 151 ~~~~~----~~~~~~a~~~~~~G~~~i~~t~ 177 (247)
T 3tdn_A 151 KKNTG----ILLRDWVVEVEKRGAGEILLTS 177 (247)
T ss_dssp -------------------------------
T ss_pred cccCC----CCHHHHHHHHHhcCCCEEEEec
Confidence 33210 1345677888889999988765
No 497
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=43.19 E-value=20 Score=33.62 Aligned_cols=79 Identities=14% Similarity=0.187 Sum_probs=53.0
Q ss_pred ccchhhhhhhHHHHHHHHHccCcEEEEeccccccCCCcccHHHHHHHHhccC--CCceEEecC---------CchhHHHH
Q 022296 188 EIEVGVGINKSRRAERCLEAGADMIMIDSDDVCKHADSLRADIIAKVIGRLG--LEKTMFEAT---------NPRTSEWF 256 (299)
Q Consensus 188 ~~~~~~~~~~i~~~~~dLeAGA~~VIiEargi~d~~G~~r~d~i~~ii~~l~--~eklifEAP---------~k~qQ~~f 256 (299)
.++++++ ++.+.+|.+|||..|=+=+|.=-+.....+.+...+++.++- .+ +|.--. ..++|...
T Consensus 28 PvTpeEi---a~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~~d-~iI~~TTgg~~~~~~~~eeR~~~ 103 (314)
T 3lot_A 28 PVTPDQI---VEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQSD-VVINVTTGGGGTLGIPVEERAKV 103 (314)
T ss_dssp CCSHHHH---HHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHCC-CEEEECSSTTGGGTCCHHHHTTH
T ss_pred CCCHHHH---HHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhcCC-eEEEeCCCCcCCCCCCHHHHHHH
Confidence 3568999 999999999999999999994323334567777777776553 33 444321 34555566
Q ss_pred HHHhCCC---cccc-cCC
Q 022296 257 IRRYGPK---VNLF-VDH 270 (299)
Q Consensus 257 I~~fG~~---VNLg-I~~ 270 (299)
+..+.|+ +|+| ++.
T Consensus 104 ~~~~~Pe~aSln~Gs~Nf 121 (314)
T 3lot_A 104 VPALKPEIATFNMGSMNF 121 (314)
T ss_dssp HHHHCCSEEEEECCCEEC
T ss_pred HHhcCCceeeecCCCccc
Confidence 6667775 4555 443
No 498
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.16 E-value=45 Score=33.22 Aligned_cols=21 Identities=24% Similarity=0.153 Sum_probs=16.6
Q ss_pred hhhhhhhHHHHHHHHHccCcEEEE
Q 022296 191 VGVGINKSRRAERCLEAGADMIMI 214 (299)
Q Consensus 191 ~~~~~~~i~~~~~dLeAGA~~VIi 214 (299)
.++. ++.++..-++|+++|-+
T Consensus 227 ~~~~---~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 227 FAET---VELAQAIEAAGATIINT 247 (671)
T ss_dssp HHHH---HHHHHHHHHHTCSEEEE
T ss_pred HHHH---HHHHHHHHhcCCCEEEc
Confidence 4556 77777778899999977
No 499
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=42.93 E-value=84 Score=26.28 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=30.2
Q ss_pred ccEEEeeCcccccCC----hhHHHHHHHHHHhCCceecCCcHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 022296 54 VDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (299)
Q Consensus 54 ID~lKfg~GTs~l~p----~~~l~eKI~l~~~~gV~v~~GtlfE~a~~qg~~~~~~yl~~~k~lGF~~IEISd 122 (299)
+|++-|..-...--. .+.+++.-++++.+||.+.. .++++.|.+.|.+.|-+.+
T Consensus 45 ~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v~v---------------~~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 45 ATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFIV---------------NDDVELALNLKADGIHIGQ 102 (227)
T ss_dssp CSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEEE---------------ESCHHHHHHHTCSEEEECT
T ss_pred CCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHcCCeEEE---------------cCHHHHHHHcCCCEEEECC
Confidence 666666542221111 22233334566667775543 1345678899999998843
No 500
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=42.77 E-value=28 Score=36.04 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCCEEEecCC----------cccC----------ChhHHHHHHHHHHHcCCcccceeee
Q 022296 105 EYVEDCKQVGFDTIELNVG----------SLEI----------PEETLLRYVRLVKSAGLKAKPKFAV 152 (299)
Q Consensus 105 ~yl~~~k~lGF~~IEISdG----------ti~i----------~~~~r~~lI~~~~~~G~~v~~E~gv 152 (299)
+.+.+++++||++|+++-= .-.. +.++..++|+.+.++|++|+-.+-.
T Consensus 268 ~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~ 335 (722)
T 3k1d_A 268 ELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVP 335 (722)
T ss_dssp HHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEe
Confidence 3457889999999998632 1111 3588899999999999999988754
Done!